Your job contains 1 sequence.
>005979
MPSAAAAHTLSSSISLISAIPKLPFSSSFSSSFPILRSFSPQLLSLSLHKHYPLPLPLTR
HLRSLSPSNDAVSSSNDDAFEDSPFEDEDDDAEYEDVDDESDGQDFGIDVDALEREAKDA
VREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALF
NRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTT
IGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKN
YMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVEG
TEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQ
KFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAE
RIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKI
IVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPRTRGGRRGRVYYCTQAAVRPPTFVFF
VNDAKLFPETYRRYMEKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASRTQANLVPRDR
KVASST
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005979
(666 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2099277 - symbol:emb2738 "embryo defective 273... 2104 8.2e-218 1
UNIPROTKB|Q81SW9 - symbol:der "GTPase Der" species:1392 "... 726 3.0e-91 2
TIGR_CMR|BA_1525 - symbol:BA_1525 "GTPase family protein"... 726 3.0e-91 2
UNIPROTKB|Q3Z6P5 - symbol:der "GTPase Der" species:243164... 685 3.6e-82 2
TIGR_CMR|DET_1395 - symbol:DET_1395 "GTP-binding protein"... 685 3.6e-82 2
GENEDB_PFALCIPARUM|PFL0835w - symbol:PFL0835w "GTP-bindin... 598 4.2e-78 3
UNIPROTKB|Q8I5N5 - symbol:PFL0835w "GTP binding protein, ... 598 4.2e-78 3
TIGR_CMR|CHY_1919 - symbol:CHY_1919 "GTP-binding protein"... 740 2.8e-73 1
UNIPROTKB|Q47WC5 - symbol:der "GTPase Der" species:167879... 372 2.1e-65 3
TIGR_CMR|CPS_4247 - symbol:CPS_4247 "GTP-binding protein ... 372 2.1e-65 3
UNIPROTKB|Q2GGW4 - symbol:engA "GTPase Der" species:20592... 530 1.1e-64 2
TIGR_CMR|ECH_0504 - symbol:ECH_0504 "GTP-binding protein ... 530 1.1e-64 2
UNIPROTKB|Q74AX4 - symbol:der "GTPase Der" species:243231... 617 3.1e-60 1
TIGR_CMR|GSU_2225 - symbol:GSU_2225 "GTP-binding protein ... 617 3.1e-60 1
UNIPROTKB|Q2GKV6 - symbol:der "GTPase Der" species:212042... 495 2.6e-59 2
TIGR_CMR|APH_0390 - symbol:APH_0390 "putative GTP-binding... 495 2.6e-59 2
UNIPROTKB|Q5LR04 - symbol:der "GTPase Der" species:246200... 412 3.7e-54 2
TIGR_CMR|SPO_2328 - symbol:SPO_2328 "GTP-binding protein ... 412 3.7e-54 2
UNIPROTKB|Q83C83 - symbol:der "GTPase Der" species:227377... 521 4.6e-50 1
TIGR_CMR|CBU_1245 - symbol:CBU_1245 "GTP-binding protein"... 521 4.6e-50 1
UNIPROTKB|P64057 - symbol:der "GTPase Der" species:1773 "... 512 4.1e-49 1
UNIPROTKB|P0A6P5 - symbol:der "50S ribosomal subunit stab... 507 1.4e-48 1
UNIPROTKB|Q9KTW7 - symbol:der "GTPase Der" species:243277... 505 2.3e-48 1
TIGR_CMR|VC_0763 - symbol:VC_0763 "GTP-binding protein" s... 505 2.3e-48 1
UNIPROTKB|Q2GDM7 - symbol:NSE_0536 "GTPase Der" species:2... 373 7.7e-45 2
TIGR_CMR|NSE_0536 - symbol:NSE_0536 "putative GTP-binding... 373 7.7e-45 2
UNIPROTKB|Q8EC36 - symbol:der "GTPase Der" species:211586... 442 1.1e-41 1
TIGR_CMR|SO_3308 - symbol:SO_3308 "GTP-binding protein En... 442 1.1e-41 1
DICTYBASE|DDB_G0279259 - symbol:DDB_G0279259 "putative GT... 438 2.1e-40 1
TIGR_CMR|CJE_0435 - symbol:CJE_0435 "GTPase family protei... 426 5.3e-40 1
TAIR|locus:2029406 - symbol:AT1G78010 species:3702 "Arabi... 230 5.9e-16 1
TIGR_CMR|BA_5734 - symbol:BA_5734 "tRNA modification GTPa... 219 5.9e-15 1
TIGR_CMR|CJE_1036 - symbol:CJE_1036 "tRNA modification GT... 201 5.5e-13 1
UNIPROTKB|P75104 - symbol:mnmE "tRNA modification GTPase ... 197 1.5e-12 1
TIGR_CMR|CHY_0006 - symbol:CHY_0006 "tRNA modification GT... 193 4.7e-12 1
TIGR_CMR|CPS_4121 - symbol:CPS_4121 "GTP-binding protein ... 186 7.0e-12 1
TIGR_CMR|GSU_3465 - symbol:GSU_3465 "tRNA modification GT... 190 9.8e-12 1
UNIPROTKB|Q8EH80 - symbol:era "GTPase Era" species:211586... 142 6.8e-11 2
TIGR_CMR|SO_1349 - symbol:SO_1349 "GTP-binding protein Er... 142 6.8e-11 2
SGD|S000004625 - symbol:MSS1 "Mitochondrial protein" spec... 182 1.0e-10 1
CGD|CAL0004408 - symbol:orf19.2042 species:5476 "Candida ... 180 1.7e-10 1
WB|WBGene00009557 - symbol:F39B2.7 species:6239 "Caenorha... 179 5.1e-10 2
TIGR_CMR|CBU_1922 - symbol:CBU_1922 "tRNA modification GT... 174 5.7e-10 1
TIGR_CMR|CPS_5049 - symbol:CPS_5049 "tRNA modification GT... 173 8.0e-10 1
UNIPROTKB|Q9KVY5 - symbol:mnmE "tRNA modification GTPase ... 172 9.5e-10 1
TIGR_CMR|VC_0003 - symbol:VC_0003 "thiophene and furan ox... 172 9.5e-10 1
TIGR_CMR|CHY_0430 - symbol:CHY_0430 "GTP-binding protein ... 164 2.4e-09 1
TIGR_CMR|SO_0003 - symbol:SO_0003 "tRNA modification GTPa... 168 2.6e-09 1
UNIPROTKB|P25522 - symbol:mnmE "GTP-binding protein with ... 167 3.4e-09 1
UNIPROTKB|Q74AX3 - symbol:era "GTPase Era" species:243231... 162 4.1e-09 1
TIGR_CMR|GSU_2226 - symbol:GSU_2226 "GTP-binding protein ... 162 4.1e-09 1
UNIPROTKB|Q8EAH6 - symbol:hydF "Fe hydrogenase maturation... 165 4.2e-09 1
TIGR_CMR|SO_3926 - symbol:SO_3926 "GTP-binding protein" s... 165 4.2e-09 1
ASPGD|ASPL0000007078 - symbol:AN6522 species:162425 "Emer... 166 7.4e-09 1
TIGR_CMR|BA_4524 - symbol:BA_4524 "GTP-binding protein Er... 151 8.4e-09 2
UNIPROTKB|P37214 - symbol:era "GTPase Era" species:210007... 156 2.0e-08 1
TAIR|locus:2154915 - symbol:AT5G66470 species:3702 "Arabi... 136 3.0e-08 2
TIGR_CMR|SPO_0691 - symbol:SPO_0691 "GTP-binding protein ... 132 5.5e-08 2
UNIPROTKB|P06616 - symbol:era "GTP-binding protein" speci... 137 8.3e-08 2
UNIPROTKB|Q9KPB3 - symbol:era "GTPase Era" species:243277... 126 2.3e-07 2
TIGR_CMR|VC_2460 - symbol:VC_2460 "GTP-binding protein Er... 126 2.3e-07 2
UNIPROTKB|P0A562 - symbol:era "GTPase Era" species:1773 "... 141 1.0e-06 1
TIGR_CMR|ECH_0476 - symbol:ECH_0476 "GTP-binding protein ... 140 1.3e-06 1
TIGR_CMR|SPO_3895 - symbol:SPO_3895 "tRNA modification GT... 140 4.0e-06 2
DICTYBASE|DDB_G0288609 - symbol:eral1 "GTP-binding protei... 138 4.2e-06 1
FB|FBgn0039189 - symbol:CG18528 species:7227 "Drosophila ... 139 4.7e-06 1
UNIPROTKB|E1BH64 - symbol:E1BH64 "Uncharacterized protein... 137 7.8e-06 1
MGI|MGI:1917609 - symbol:Gtpbp3 "GTP binding protein 3" s... 136 1.0e-05 1
TIGR_CMR|APH_0350 - symbol:APH_0350 "GTP-binding protein ... 131 1.4e-05 1
UNIPROTKB|E2RE04 - symbol:GTPBP3 "Uncharacterized protein... 133 1.5e-05 1
RGD|1305367 - symbol:Gtpbp3 "GTP binding protein 3" speci... 134 1.7e-05 1
DICTYBASE|DDB_G0270228 - symbol:gtpbp3 "GTP-binding prote... 134 1.8e-05 1
TIGR_CMR|NSE_0717 - symbol:NSE_0717 "tRNA modification GT... 133 2.5e-05 1
UNIPROTKB|Q969Y2 - symbol:GTPBP3 "tRNA modification GTPas... 128 7.5e-05 1
POMBASE|SPAC222.05c - symbol:mss1 "mitochondrial GTPase (... 127 9.7e-05 1
UNIPROTKB|Q5SM23 - symbol:era "GTPase Era" species:300852... 120 0.00024 1
UNIPROTKB|Q3AFV0 - symbol:hflX "GTPase HflX" species:2461... 122 0.00026 1
TIGR_CMR|CHY_0112 - symbol:CHY_0112 "GTP-binding protein"... 122 0.00026 1
ASPGD|ASPL0000044917 - symbol:AN1666 species:162425 "Emer... 123 0.00032 1
TIGR_CMR|APH_1288 - symbol:APH_1288 "tRNA modification GT... 121 0.00037 1
TIGR_CMR|CBU_1502 - symbol:CBU_1502 "GTP-binding protein ... 121 0.00040 2
UNIPROTKB|A8JBB8 - symbol:CHLREDRAFT_206017 "Putative unc... 108 0.00053 2
POMBASE|SPBC26H8.08c - symbol:grn1 "GTPase Grn1" species:... 119 0.00067 1
UNIPROTKB|Q5TKI5 - symbol:OSJNBb0048I21.12 "Os05g0430400 ... 117 0.00076 1
TIGR_CMR|ECH_0060 - symbol:ECH_0060 "tRNA modification GT... 122 0.00081 2
ZFIN|ZDB-GENE-050522-335 - symbol:gtpbp3 "GTP binding pro... 125 0.00090 2
UNIPROTKB|Q2GGM7 - symbol:engB "Probable GTP-binding prot... 94 0.00098 2
TIGR_CMR|ECH_0595 - symbol:ECH_0595 "GTP-binding protein ... 94 0.00098 2
>TAIR|locus:2099277 [details] [associations]
symbol:emb2738 "embryo defective 2738" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0009507
"chloroplast" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG1160 HOGENOM:HOG000242861 OMA:IEWISSS Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
EMBL:BT046184 IPI:IPI00529367 RefSeq:NP_187815.2 UniGene:At.21430
ProteinModelPortal:B5X565 SMR:B5X565 STRING:B5X565 PaxDb:B5X565
PRIDE:B5X565 EnsemblPlants:AT3G12080.1 GeneID:820382
KEGG:ath:AT3G12080 TAIR:At3g12080 PhylomeDB:B5X565
ProtClustDB:CLSN2918072 Genevestigator:B5X565 Uniprot:B5X565
Length = 663
Score = 2104 (745.7 bits), Expect = 8.2e-218, P = 8.2e-218
Identities = 410/563 (72%), Positives = 474/563 (84%)
Query: 104 QDFGIDVDALEREAKDAVREYSSLLSRQLIIQDETXXXXXXXXXXXXXXTTIGNVPEHLL 163
+D ID+ LE+EA+D VR+Y++ LSR+L I+DET +PEHLL
Sbjct: 99 EDDSIDISVLEKEARDIVRDYATTLSRELKIEDETIEGKETRRKGKRLAKNTQQIPEHLL 158
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
RVAIVGRPNVGKSALFNRLVG NRAIVVDEPGVTRDR+YGRS+WG+ EF++VDTGGV+
Sbjct: 159 QRVAIVGRPNVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGVMT 218
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
VSKS +ME+L ++TTIGMEGIPL++REAA+ARMPSMIE+QATAA++ES VIIF+VDGQ
Sbjct: 219 VSKSPSGVMEELNVSTTIGMEGIPLSSREAAIARMPSMIEKQATAAVDESAVIIFVVDGQ 278
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTG 343
AG + AD EIADWLRK Y K+IILAVNKCESPRKG+MQ SEFWSLGF+P+PISA+SGTG
Sbjct: 279 AGPSGADVEIADWLRKYYSHKYIILAVNKCESPRKGLMQASEFWSLGFTPIPISALSGTG 338
Query: 344 TGELLDLVCSELKKVEGTEDLVEEE--NRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
TGELLDLVCS L K+E E++ EEE N IPAIAI+GRPNVGKSSILNALV EDRTIVSP
Sbjct: 339 TGELLDLVCSGLIKLEIMENIEEEEEENYIPAIAIIGRPNVGKSSILNALVREDRTIVSP 398
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
+SGTTRDAID EFTGP+G+KFRLIDTAGIRK++++ASSGSTTEA+SVNRAFRAIRRSDVV
Sbjct: 399 VSGTTRDAIDAEFTGPDGEKFRLIDTAGIRKKSSVASSGSTTEAMSVNRAFRAIRRSDVV 458
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
ALVIEAMACITEQD +IAERIE+EGKGCL+VVNKWDTIPNKNQ+TA +YE DVREKLR+L
Sbjct: 459 ALVIEAMACITEQDLKIAERIEREGKGCLVVVNKWDTIPNKNQETAAHYEDDVREKLRSL 518
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPXXXXXXX 581
WAPIVYSTAI G SVD I+VAA V KERSRRLSTA +NQV++EAVAFKSPP
Sbjct: 519 KWAPIVYSTAITGHSVDNIVVAAATVQKERSRRLSTAILNQVIREAVAFKSPPRTRGGKR 578
Query: 582 XXVYYCTQAAVRPPTFVFFVNDAKLFPETYRRYMEKQLRADAGFSGTPIRLLWRSRRKME 641
VYYCTQAA+RPPTFVFFVNDAKLF +TYRRYMEKQLR DAGF+GTPIRLLWRSR++ +
Sbjct: 579 GRVYYCTQAAIRPPTFVFFVNDAKLFSDTYRRYMEKQLRTDAGFAGTPIRLLWRSRKRSD 638
Query: 642 MKEGKSASRTQANLVPRDRKVAS 664
G + A L R R +A+
Sbjct: 639 KNGGGGGTMRMAGLT-RQRNLAT 660
>UNIPROTKB|Q81SW9 [details] [associations]
symbol:der "GTPase Der" species:1392 "Bacillus anthracis"
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0042254 RefSeq:NP_843976.1
RefSeq:YP_018148.1 RefSeq:YP_027683.1 ProteinModelPortal:Q81SW9
SMR:Q81SW9 IntAct:Q81SW9 DNASU:1086325
EnsemblBacteria:EBBACT00000011036 EnsemblBacteria:EBBACT00000013653
EnsemblBacteria:EBBACT00000023216 GeneID:1086325 GeneID:2817326
GeneID:2849869 KEGG:ban:BA_1525 KEGG:bar:GBAA_1525 KEGG:bat:BAS1414
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS
ProtClustDB:PRK00093 BioCyc:BANT260799:GJAJ-1488-MONOMER
BioCyc:BANT261594:GJ7F-1550-MONOMER Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
Uniprot:Q81SW9
Length = 436
Score = 726 (260.6 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
Identities = 157/379 (41%), Positives = 241/379 (63%)
Query: 260 SMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG 319
+ I +QA AI+E+ VIIF+ +G+ G+TAADEE+A L ++ +K ++LAVNK ++P
Sbjct: 70 TQIRQQAEVAIDEADVIIFMTNGRDGVTAADEEVAKILYRS--NKPVVLAVNKVDNPEMR 127
Query: 320 IMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVG 378
+ +F++LGF P PIS G G G+LLD K+E ED +E+ +++G
Sbjct: 128 -SDIYDFYALGFGEPFPISGTHGLGLGDLLDEAAQHFPKIE--EDGYDEDTI--RFSLIG 182
Query: 379 RPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIAS 438
RPNVGKSS++NAL+G++R IVS ++GTTRDA+DT ++ +G+ + +IDTAG+RK+ +
Sbjct: 183 RPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYS-KDGKDYVIIDTAGMRKKGKVYE 241
Query: 439 SGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDT 498
S TE SV RA RAI RSDVV +V++ I EQD +IA G+ +IVVNKWD
Sbjct: 242 S---TEKYSVLRALRAIERSDVVLVVLDGEEGIIEQDKKIAGYAHDSGRAVVIVVNKWDA 298
Query: 499 IPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTA 558
+ K+++T +E+++R + L++APIV+ +A + +I + V++ S R+ T
Sbjct: 299 V-KKDEKTMKAFEENIRAHFQFLEYAPIVFLSAKTRKRTQTLIPVIDEVNESHSIRIQTN 357
Query: 559 TINQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLFPETYRRYMEKQ 618
+N V+ +AVA P ++Y TQ AV+PPTFV FVND +L +Y R+++ +
Sbjct: 358 VLNDVIMDAVAMNPTPTHNGSRLK-IFYATQVAVKPPTFVVFVNDPELLHFSYERFLKNR 416
Query: 619 LRADAGFSGTPIRLLWRSR 637
LR GF GTPI ++ R+R
Sbjct: 417 LRESFGFVGTPIHIIARAR 435
Score = 203 (76.5 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
Identities = 46/101 (45%), Positives = 59/101 (58%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV-- 221
P +AIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSAGEWLNHEFNIIDTGGIDI 63
Query: 222 -----LNVSKSQPNIM---EDLAITTTIGMEGIPLATREAA 254
L + Q + D+ I T G +G+ A E A
Sbjct: 64 GDEPFLTQIRQQAEVAIDEADVIIFMTNGRDGVTAADEEVA 104
Score = 168 (64.2 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 50/141 (35%), Positives = 70/141 (49%)
Query: 372 PAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPE--GQKFRLIDTAG 429
P IAIVGRPNVGKS+I N +VGE +IV I G TRD I ++ E +F +IDT G
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRI---YSAGEWLNHEFNIIDTGG 60
Query: 430 IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGC 489
I I T+ +A AI +DV+ + +T D +A+ + + K
Sbjct: 61 ID----IGDEPFLTQIRQ--QAEVAIDEADVIIFMTNGRDGVTAADEEVAKILYRSNKPV 114
Query: 490 LIVVNKWDTIPNKNQQTATYY 510
++ VNK D P +Y
Sbjct: 115 VLAVNKVDN-PEMRSDIYDFY 134
>TIGR_CMR|BA_1525 [details] [associations]
symbol:BA_1525 "GTPase family protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0042254
RefSeq:NP_843976.1 RefSeq:YP_018148.1 RefSeq:YP_027683.1
ProteinModelPortal:Q81SW9 SMR:Q81SW9 IntAct:Q81SW9 DNASU:1086325
EnsemblBacteria:EBBACT00000011036 EnsemblBacteria:EBBACT00000013653
EnsemblBacteria:EBBACT00000023216 GeneID:1086325 GeneID:2817326
GeneID:2849869 KEGG:ban:BA_1525 KEGG:bar:GBAA_1525 KEGG:bat:BAS1414
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS
ProtClustDB:PRK00093 BioCyc:BANT260799:GJAJ-1488-MONOMER
BioCyc:BANT261594:GJ7F-1550-MONOMER Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
Uniprot:Q81SW9
Length = 436
Score = 726 (260.6 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
Identities = 157/379 (41%), Positives = 241/379 (63%)
Query: 260 SMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG 319
+ I +QA AI+E+ VIIF+ +G+ G+TAADEE+A L ++ +K ++LAVNK ++P
Sbjct: 70 TQIRQQAEVAIDEADVIIFMTNGRDGVTAADEEVAKILYRS--NKPVVLAVNKVDNPEMR 127
Query: 320 IMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVG 378
+ +F++LGF P PIS G G G+LLD K+E ED +E+ +++G
Sbjct: 128 -SDIYDFYALGFGEPFPISGTHGLGLGDLLDEAAQHFPKIE--EDGYDEDTI--RFSLIG 182
Query: 379 RPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIAS 438
RPNVGKSS++NAL+G++R IVS ++GTTRDA+DT ++ +G+ + +IDTAG+RK+ +
Sbjct: 183 RPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYS-KDGKDYVIIDTAGMRKKGKVYE 241
Query: 439 SGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDT 498
S TE SV RA RAI RSDVV +V++ I EQD +IA G+ +IVVNKWD
Sbjct: 242 S---TEKYSVLRALRAIERSDVVLVVLDGEEGIIEQDKKIAGYAHDSGRAVVIVVNKWDA 298
Query: 499 IPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTA 558
+ K+++T +E+++R + L++APIV+ +A + +I + V++ S R+ T
Sbjct: 299 V-KKDEKTMKAFEENIRAHFQFLEYAPIVFLSAKTRKRTQTLIPVIDEVNESHSIRIQTN 357
Query: 559 TINQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLFPETYRRYMEKQ 618
+N V+ +AVA P ++Y TQ AV+PPTFV FVND +L +Y R+++ +
Sbjct: 358 VLNDVIMDAVAMNPTPTHNGSRLK-IFYATQVAVKPPTFVVFVNDPELLHFSYERFLKNR 416
Query: 619 LRADAGFSGTPIRLLWRSR 637
LR GF GTPI ++ R+R
Sbjct: 417 LRESFGFVGTPIHIIARAR 435
Score = 203 (76.5 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
Identities = 46/101 (45%), Positives = 59/101 (58%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV-- 221
P +AIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSAGEWLNHEFNIIDTGGIDI 63
Query: 222 -----LNVSKSQPNIM---EDLAITTTIGMEGIPLATREAA 254
L + Q + D+ I T G +G+ A E A
Sbjct: 64 GDEPFLTQIRQQAEVAIDEADVIIFMTNGRDGVTAADEEVA 104
Score = 168 (64.2 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 50/141 (35%), Positives = 70/141 (49%)
Query: 372 PAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPE--GQKFRLIDTAG 429
P IAIVGRPNVGKS+I N +VGE +IV I G TRD I ++ E +F +IDT G
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRI---YSAGEWLNHEFNIIDTGG 60
Query: 430 IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGC 489
I I T+ +A AI +DV+ + +T D +A+ + + K
Sbjct: 61 ID----IGDEPFLTQIRQ--QAEVAIDEADVIIFMTNGRDGVTAADEEVAKILYRSNKPV 114
Query: 490 LIVVNKWDTIPNKNQQTATYY 510
++ VNK D P +Y
Sbjct: 115 VLAVNKVDN-PEMRSDIYDFY 134
>UNIPROTKB|Q3Z6P5 [details] [associations]
symbol:der "GTPase Der" species:243164 "Dehalococcoides
ethenogenes 195" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_182104.1 ProteinModelPortal:Q3Z6P5
STRING:Q3Z6P5 GeneID:3229314 KEGG:det:DET1395 PATRIC:21609817
BioCyc:DETH243164:GJNF-1396-MONOMER Uniprot:Q3Z6P5
Length = 441
Score = 685 (246.2 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 157/374 (41%), Positives = 229/374 (61%)
Query: 265 QATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS 324
Q + AI+E+ +++ +VD +AGL D E+AD +R+ K +IL NK ++ + G + +
Sbjct: 78 QISLAIKEADLVLLVVDVKAGLITPDYEMADIIRRT--GKPVILVANKADNLKMG-QEAA 134
Query: 325 EFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVG 383
EF+SLGF P ISA G+G +L+D V EL + EE+N + +A+VGR NVG
Sbjct: 135 EFYSLGFGEPSVISAFHGSGISDLMDRVLEELP--DQPIATPEEDNSVK-LALVGRTNVG 191
Query: 384 KSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTT 443
KS++LN +G++R+IVS I GTTRDAIDT G LIDTAGIR+R + S
Sbjct: 192 KSTLLNTFMGQERSIVSNIPGTTRDAIDTPLNF-NGTNVLLIDTAGIRRRGKVESG---V 247
Query: 444 EALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKN 503
E SV RA +A+ R+D+V LV++ +T QD IA + KG +I++NKWD K
Sbjct: 248 EKYSVLRALKAVDRADIVLLVMDTEELVTAQDTHIAGYVRDTAKGIIIILNKWDL--GKG 305
Query: 504 QQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQV 563
Q A Q ++ + + LD+API++ + G+ VD II A V +ER++R+ TA +N V
Sbjct: 306 QDKAEV-TQTIQSRFKFLDYAPILFVSGKTGRGVDTIIPMALKVQEERNKRIPTAKVNSV 364
Query: 564 VQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLFPETYRRYMEKQLRADA 623
V EA++ +PP +YY TQA PP+FVFFVN+ KL +Y R++E +LR
Sbjct: 365 VTEALSAHTPPHQGKTQLK-IYYATQADTNPPSFVFFVNNPKLVHFSYERFIENRLRESF 423
Query: 624 GFSGTPIRLLWRSR 637
GF GTPIRL +++R
Sbjct: 424 GFFGTPIRLTFKAR 437
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 46/142 (32%), Positives = 75/142 (52%)
Query: 369 NRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTA 428
N P IAIVGR NVGKS++LN L ++ I + GTTRD + T + + ++ ++DT
Sbjct: 3 NTTPIIAIVGRQNVGKSTLLNRLAHKNLAITEDLPGTTRDRLFTTVSWLD-RRLIMVDTG 61
Query: 429 GIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKG 488
G+ +S+ AI+ +D+V LV++ A + D +A+ I + GK
Sbjct: 62 GLDPDLESIIGQQVNIQISL-----AIKEADLVLLVVDVKAGLITPDYEMADIIRRTGKP 116
Query: 489 CLIVVNKWDTIPNKNQQTATYY 510
++V NK D + Q+ A +Y
Sbjct: 117 VILVANKADNL-KMGQEAAEFY 137
Score = 158 (60.7 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 38/78 (48%), Positives = 47/78 (60%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV-- 221
P +AIVGR NVGKS L NRL N AI D PG TRDR++ W + ++VDTGG+
Sbjct: 6 PIIAIVGRQNVGKSTLLNRLAHKNLAITEDLPGTTRDRLFTTVSWLDRRLIMVDTGGLDP 65
Query: 222 -L-NVSKSQPNIMEDLAI 237
L ++ Q NI LAI
Sbjct: 66 DLESIIGQQVNIQISLAI 83
>TIGR_CMR|DET_1395 [details] [associations]
symbol:DET_1395 "GTP-binding protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_182104.1 ProteinModelPortal:Q3Z6P5
STRING:Q3Z6P5 GeneID:3229314 KEGG:det:DET1395 PATRIC:21609817
BioCyc:DETH243164:GJNF-1396-MONOMER Uniprot:Q3Z6P5
Length = 441
Score = 685 (246.2 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 157/374 (41%), Positives = 229/374 (61%)
Query: 265 QATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS 324
Q + AI+E+ +++ +VD +AGL D E+AD +R+ K +IL NK ++ + G + +
Sbjct: 78 QISLAIKEADLVLLVVDVKAGLITPDYEMADIIRRT--GKPVILVANKADNLKMG-QEAA 134
Query: 325 EFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVG 383
EF+SLGF P ISA G+G +L+D V EL + EE+N + +A+VGR NVG
Sbjct: 135 EFYSLGFGEPSVISAFHGSGISDLMDRVLEELP--DQPIATPEEDNSVK-LALVGRTNVG 191
Query: 384 KSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTT 443
KS++LN +G++R+IVS I GTTRDAIDT G LIDTAGIR+R + S
Sbjct: 192 KSTLLNTFMGQERSIVSNIPGTTRDAIDTPLNF-NGTNVLLIDTAGIRRRGKVESG---V 247
Query: 444 EALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKN 503
E SV RA +A+ R+D+V LV++ +T QD IA + KG +I++NKWD K
Sbjct: 248 EKYSVLRALKAVDRADIVLLVMDTEELVTAQDTHIAGYVRDTAKGIIIILNKWDL--GKG 305
Query: 504 QQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQV 563
Q A Q ++ + + LD+API++ + G+ VD II A V +ER++R+ TA +N V
Sbjct: 306 QDKAEV-TQTIQSRFKFLDYAPILFVSGKTGRGVDTIIPMALKVQEERNKRIPTAKVNSV 364
Query: 564 VQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLFPETYRRYMEKQLRADA 623
V EA++ +PP +YY TQA PP+FVFFVN+ KL +Y R++E +LR
Sbjct: 365 VTEALSAHTPPHQGKTQLK-IYYATQADTNPPSFVFFVNNPKLVHFSYERFIENRLRESF 423
Query: 624 GFSGTPIRLLWRSR 637
GF GTPIRL +++R
Sbjct: 424 GFFGTPIRLTFKAR 437
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 46/142 (32%), Positives = 75/142 (52%)
Query: 369 NRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTA 428
N P IAIVGR NVGKS++LN L ++ I + GTTRD + T + + ++ ++DT
Sbjct: 3 NTTPIIAIVGRQNVGKSTLLNRLAHKNLAITEDLPGTTRDRLFTTVSWLD-RRLIMVDTG 61
Query: 429 GIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKG 488
G+ +S+ AI+ +D+V LV++ A + D +A+ I + GK
Sbjct: 62 GLDPDLESIIGQQVNIQISL-----AIKEADLVLLVVDVKAGLITPDYEMADIIRRTGKP 116
Query: 489 CLIVVNKWDTIPNKNQQTATYY 510
++V NK D + Q+ A +Y
Sbjct: 117 VILVANKADNL-KMGQEAAEFY 137
Score = 158 (60.7 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 38/78 (48%), Positives = 47/78 (60%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV-- 221
P +AIVGR NVGKS L NRL N AI D PG TRDR++ W + ++VDTGG+
Sbjct: 6 PIIAIVGRQNVGKSTLLNRLAHKNLAITEDLPGTTRDRLFTTVSWLDRRLIMVDTGGLDP 65
Query: 222 -L-NVSKSQPNIMEDLAI 237
L ++ Q NI LAI
Sbjct: 66 DLESIIGQQVNIQISLAI 83
>GENEDB_PFALCIPARUM|PFL0835w [details] [associations]
symbol:PFL0835w "GTP-binding protein, putative"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] [GO:0020011 "apicoplast"
evidence=RCA] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014188 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HSSP:P44681 RefSeq:XP_001350575.1 ProteinModelPortal:Q8I5N5
IntAct:Q8I5N5 MINT:MINT-1620139 EnsemblProtists:PFL0835w:mRNA
GeneID:811219 KEGG:pfa:PFL0835w EuPathDB:PlasmoDB:PF3D7_1217300
ProtClustDB:CLSZ2432227 Uniprot:Q8I5N5
Length = 874
Score = 598 (215.6 bits), Expect = 4.2e-78, Sum P(3) = 4.2e-78
Identities = 135/342 (39%), Positives = 199/342 (58%)
Query: 306 IILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGTGELLDLVCSELKKVEGTE-- 362
+IL VNKCES + G + EFWSLGF +P P S I G G E+LD + K++ E
Sbjct: 505 VILCVNKCESYKDGFYKAQEFWSLGFGNPFPCSGIHGNGLSEILDECIKHIDKIKINEEH 564
Query: 363 DLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQK- 421
D + E+N I I+ +G+PN GKSSILN ++ +R IVSP++GTT D+ID + +
Sbjct: 565 DDINEQNTIN-ISFIGKPNTGKSSILNKILNCNRFIVSPLAGTTVDSIDVLVKLKQSDRI 623
Query: 422 FRLIDTAGIRKRAAIASSGSTT--EALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIA 479
+RLIDTAGI+KR + T E L NR +AI+RSDV LVI++ I+ QD IA
Sbjct: 624 YRLIDTAGIQKRKKNVPFNNKTKYEYLLYNRTEKAIKRSDVCILVIDSFNGISTQDINIA 683
Query: 480 ERIEQEGKGCLIVVNKWDTIPNKNQ---QTATYYEQDVREKLRALDWAPIVYSTAIAGQS 536
+I QE K C+I NKWD I NKN T Y V L+ +D++ I++ +A Q
Sbjct: 684 RKIVQENKSCIICCNKWDLIYNKNDIFNDTKNY----VLNLLKPIDFSNIIFISAKTSQR 739
Query: 537 VDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPT 596
+ I AE K ++R++T T+N +++EA+ + PP +YY Q+ ++PP+
Sbjct: 740 LLNIFHLAEETYKNYTKRVNTNTLNDIIKEALLLR-PPIPIKNKSLNIYYAFQSHIKPPS 798
Query: 597 FVFFVNDAKLFPETYRRYMEKQLRADAGFSGTPIRLLWRSRR 638
FVFF N K Y +Y+E ++R GTPI++ ++ ++
Sbjct: 799 FVFFCNSEKSVYANYTKYLENKIREAFDIKGTPIKIYYKQKK 840
Score = 149 (57.5 bits), Expect = 4.2e-78, Sum P(3) = 4.2e-78
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNR--AIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG 220
LP ++I+GRPNVGKS +FNRL + +IV+D TRD++YG W ++F LVDTGG
Sbjct: 308 LPLISIIGRPNVGKSTIFNRLTRKYQDGSIVLDVSS-TRDKLYGEVEWEGYKFELVDTGG 366
Query: 221 VL 222
++
Sbjct: 367 LV 368
Score = 141 (54.7 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 50/174 (28%), Positives = 86/174 (49%)
Query: 349 DLVCSELKKVEGTEDL-VEEENRIPAIAIVGRPNVGKSSILNALVG--EDRTIVSPISGT 405
D+ E KK + +D+ + +P I+I+GRPNVGKS+I N L +D +IV +S +
Sbjct: 285 DVQTEENKKNKKKKDVELNIIRNLPLISIIGRPNVGKSTIFNRLTRKYQDGSIVLDVS-S 343
Query: 406 TRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVI 465
TRD + E EG KF L+DT G+ + ++ + ++ A++ S VV V+
Sbjct: 344 TRDKLYGEVEW-EGYKFELVDTGGL-----VFEQEKFSKEIK-DQILMALKESSVVIFVV 396
Query: 466 EAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTA---TYYEQDVRE 516
+ + + +D I + K L+ + I K QQ T+ +++E
Sbjct: 397 DGIHGVDPRDIEICRFLR---KYILLKHPQGKYINKKEQQMGNSNTHVNTNIKE 447
Score = 78 (32.5 bits), Expect = 4.2e-78, Sum P(3) = 4.2e-78
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 262 IERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRK 299
I+ Q A++ES V+IF+VDG G+ D EI +LRK
Sbjct: 378 IKDQILMALKESSVVIFVVDGIHGVDPRDIEICRFLRK 415
>UNIPROTKB|Q8I5N5 [details] [associations]
symbol:PFL0835w "GTP binding protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] [GO:0020011 "apicoplast"
evidence=RCA] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014188 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HSSP:P44681 RefSeq:XP_001350575.1 ProteinModelPortal:Q8I5N5
IntAct:Q8I5N5 MINT:MINT-1620139 EnsemblProtists:PFL0835w:mRNA
GeneID:811219 KEGG:pfa:PFL0835w EuPathDB:PlasmoDB:PF3D7_1217300
ProtClustDB:CLSZ2432227 Uniprot:Q8I5N5
Length = 874
Score = 598 (215.6 bits), Expect = 4.2e-78, Sum P(3) = 4.2e-78
Identities = 135/342 (39%), Positives = 199/342 (58%)
Query: 306 IILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGTGELLDLVCSELKKVEGTE-- 362
+IL VNKCES + G + EFWSLGF +P P S I G G E+LD + K++ E
Sbjct: 505 VILCVNKCESYKDGFYKAQEFWSLGFGNPFPCSGIHGNGLSEILDECIKHIDKIKINEEH 564
Query: 363 DLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQK- 421
D + E+N I I+ +G+PN GKSSILN ++ +R IVSP++GTT D+ID + +
Sbjct: 565 DDINEQNTIN-ISFIGKPNTGKSSILNKILNCNRFIVSPLAGTTVDSIDVLVKLKQSDRI 623
Query: 422 FRLIDTAGIRKRAAIASSGSTT--EALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIA 479
+RLIDTAGI+KR + T E L NR +AI+RSDV LVI++ I+ QD IA
Sbjct: 624 YRLIDTAGIQKRKKNVPFNNKTKYEYLLYNRTEKAIKRSDVCILVIDSFNGISTQDINIA 683
Query: 480 ERIEQEGKGCLIVVNKWDTIPNKNQ---QTATYYEQDVREKLRALDWAPIVYSTAIAGQS 536
+I QE K C+I NKWD I NKN T Y V L+ +D++ I++ +A Q
Sbjct: 684 RKIVQENKSCIICCNKWDLIYNKNDIFNDTKNY----VLNLLKPIDFSNIIFISAKTSQR 739
Query: 537 VDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPT 596
+ I AE K ++R++T T+N +++EA+ + PP +YY Q+ ++PP+
Sbjct: 740 LLNIFHLAEETYKNYTKRVNTNTLNDIIKEALLLR-PPIPIKNKSLNIYYAFQSHIKPPS 798
Query: 597 FVFFVNDAKLFPETYRRYMEKQLRADAGFSGTPIRLLWRSRR 638
FVFF N K Y +Y+E ++R GTPI++ ++ ++
Sbjct: 799 FVFFCNSEKSVYANYTKYLENKIREAFDIKGTPIKIYYKQKK 840
Score = 149 (57.5 bits), Expect = 4.2e-78, Sum P(3) = 4.2e-78
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNR--AIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG 220
LP ++I+GRPNVGKS +FNRL + +IV+D TRD++YG W ++F LVDTGG
Sbjct: 308 LPLISIIGRPNVGKSTIFNRLTRKYQDGSIVLDVSS-TRDKLYGEVEWEGYKFELVDTGG 366
Query: 221 VL 222
++
Sbjct: 367 LV 368
Score = 141 (54.7 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 50/174 (28%), Positives = 86/174 (49%)
Query: 349 DLVCSELKKVEGTEDL-VEEENRIPAIAIVGRPNVGKSSILNALVG--EDRTIVSPISGT 405
D+ E KK + +D+ + +P I+I+GRPNVGKS+I N L +D +IV +S +
Sbjct: 285 DVQTEENKKNKKKKDVELNIIRNLPLISIIGRPNVGKSTIFNRLTRKYQDGSIVLDVS-S 343
Query: 406 TRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVI 465
TRD + E EG KF L+DT G+ + ++ + ++ A++ S VV V+
Sbjct: 344 TRDKLYGEVEW-EGYKFELVDTGGL-----VFEQEKFSKEIK-DQILMALKESSVVIFVV 396
Query: 466 EAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTA---TYYEQDVRE 516
+ + + +D I + K L+ + I K QQ T+ +++E
Sbjct: 397 DGIHGVDPRDIEICRFLR---KYILLKHPQGKYINKKEQQMGNSNTHVNTNIKE 447
Score = 78 (32.5 bits), Expect = 4.2e-78, Sum P(3) = 4.2e-78
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 262 IERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRK 299
I+ Q A++ES V+IF+VDG G+ D EI +LRK
Sbjct: 378 IKDQILMALKESSVVIFVVDGIHGVDPRDIEICRFLRK 415
>TIGR_CMR|CHY_1919 [details] [associations]
symbol:CHY_1919 "GTP-binding protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0042254 GO:GO:0017111 eggNOG:COG1160 HOGENOM:HOG000242861
KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR RefSeq:YP_360738.1 ProteinModelPortal:Q3AAU6
STRING:Q3AAU6 GeneID:3728232 KEGG:chy:CHY_1919 PATRIC:21276929
BioCyc:CHYD246194:GJCN-1918-MONOMER Uniprot:Q3AAU6
Length = 440
Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
Identities = 175/448 (39%), Positives = 260/448 (58%)
Query: 191 VVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLAT 250
+V P V + ++ R GE ++ DT GV + + I G+ +
Sbjct: 8 IVGRPNVGKSTLFNRII-GERIAIVEDTPGVTR-DRLYSEAEWQGKVFDLIDTGGLEFS- 64
Query: 251 REAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAV 310
+ ++ IE+ AI E+ +I+F+ D + G+T+ DE +A LRK+ DK +IL
Sbjct: 65 EDLITTKVREQIEK----AINEADLILFVCDSREGITSTDEAVAKNLRKS--DKPVILVA 118
Query: 311 NKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEEN 369
NK + + + LG P P+SA +GT G+LLDLV S+L E ED EN
Sbjct: 119 NKVDDYLNPPANFYDLYRLGLGEPFPVSAANGTNVGDLLDLVISKLNFPEDYED----EN 174
Query: 370 RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAG 429
+ IA+VGRPNVGKSS++NAL+GE+R +VS I GTTRDAIDT +G+ + LIDTAG
Sbjct: 175 PVVKIAVVGRPNVGKSSLVNALLGEERVVVSDIPGTTRDAIDTPMWY-QGKPYLLIDTAG 233
Query: 430 IRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGC 489
+R+++ I E SVNR+ +AIRR+DV LVI A +TEQD +IA I + G+G
Sbjct: 234 MRRKSRIEED---LERYSVNRSIKAIRRADVALLVISAEEGVTEQDKKIAGLIHEYGRGV 290
Query: 490 LIVVNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMVDK 549
+IVVNKWD I K+ +TA Y++ + +L L +AP+++ +A GQ ++K++ + V
Sbjct: 291 IIVVNKWDLI-EKDAKTADRYKEHIYFELGFLKYAPVIFVSAKTGQRLNKLMELVDRVSF 349
Query: 550 ERSRRLSTATINQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLFPE 609
E +R++T+ +NQV++EAV PP +YY TQ +PPTF FVNDA+L
Sbjct: 350 EHQKRVATSILNQVLREAVVLNPPPADRGRPLK-IYYATQIETKPPTFALFVNDAELMHF 408
Query: 610 TYRRYMEKQLRADAGFSGTPIRLLWRSR 637
+Y RY+E R + GF GT ++ + R R
Sbjct: 409 SYLRYLENVFRQNFGFEGTTLKFVLRER 436
Score = 192 (72.6 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 48/90 (53%), Positives = 55/90 (61%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR++G AIV D PGVTRDR+Y + W F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIIGERIAIVEDTPGVTRDRLYSEAEWQGKVFDLIDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREA 253
EDL ITT + E I A EA
Sbjct: 62 ------EFSEDL-ITTKV-REQIEKAINEA 83
Score = 180 (68.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 46/140 (32%), Positives = 74/140 (52%)
Query: 372 PAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIR 431
P +AIVGRPNVGKS++ N ++GE IV G TRD + +E +G+ F LIDT G+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIIGERIAIVEDTPGVTRDRLYSEAEW-QGKVFDLIDTGGLE 62
Query: 432 KRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLI 491
+ ++ E + +AI +D++ V ++ IT D +A+ + + K ++
Sbjct: 63 FSEDLITT-KVREQIE-----KAINEADLILFVCDSREGITSTDEAVAKNLRKSDKPVIL 116
Query: 492 VVNKWDTIPNKNQQTATYYE 511
V NK D N A +Y+
Sbjct: 117 VANKVDDYLNP---PANFYD 133
Score = 145 (56.1 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E+ + ++A+VGRPNVGKS+L N L+G R +V D PG TRD + ++ ++L+DT
Sbjct: 173 ENPVVKIAVVGRPNVGKSSLVNALLGEERVVVSDIPGTTRDAIDTPMWYQGKPYLLIDTA 232
Query: 220 GVLNVSKSQPNIMEDLAITTTI 241
G+ S+ + ++ E ++ +I
Sbjct: 233 GMRRKSRIEEDL-ERYSVNRSI 253
>UNIPROTKB|Q47WC5 [details] [associations]
symbol:der "GTPase Der" species:167879 "Colwellia
psychrerythraea 34H" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
RefSeq:YP_270897.1 ProteinModelPortal:Q47WC5 STRING:Q47WC5
GeneID:3520024 KEGG:cps:CPS_4247 PATRIC:21471359
HOGENOM:HOG000242862 BioCyc:CPSY167879:GI48-4257-MONOMER
Uniprot:Q47WC5
Length = 498
Score = 372 (136.0 bits), Expect = 2.1e-65, Sum P(3) = 2.1e-65
Identities = 93/312 (29%), Positives = 162/312 (51%)
Query: 349 DLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRD 408
D+ +E + + ED +E ++I +AI+GRPNVGKS++ N ++GE+R +V + GTTRD
Sbjct: 191 DVELTEEELAKKLEDEPQENDKIK-LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRD 249
Query: 409 AIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAM 468
++ G+++ LIDTAGIR+R + E SV + RAI ++V L+I+A
Sbjct: 250 SVYIPMER-NGREYTLIDTAGIRRRKNVTD---VVEKYSVIKTLRAIEDANVCLLIIDAQ 305
Query: 469 ACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVY 528
I++QD + I + G+ ++ VNKWD + + + + ++ +L +D+A + +
Sbjct: 306 EGISDQDLSLLGFILEAGRSLVLAVNKWDGLEDHEKDRI---KTELDRRLGFIDFARVHF 362
Query: 529 STAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPXXXXXXXXXVYYCT 588
+A+ G V + + E ++R+STA + +++ AV PP + Y
Sbjct: 363 ISALHGTGVGHLYESVEEAFVSATKRISTAMVTKILDMAVFDHQPPLHQGRRIK-LKYAH 421
Query: 589 QAAVRPPTFVFFVNDAKLFPETYRRYMEKQLRADAGFSGTPIRLLWRS-------RRKME 641
PP + N AK P +Y+RY+ R GTPIR+ ++ ++K+
Sbjct: 422 AGGYNPPIIIIHGNSAKKLPMSYKRYLMNYYRKSLKMMGTPIRIQFKDTLNPFAGKKKLN 481
Query: 642 MKEGKSASR-TQ 652
E K +R TQ
Sbjct: 482 YTEQKKIARATQ 493
Score = 193 (73.0 bits), Expect = 2.1e-65, Sum P(3) = 2.1e-65
Identities = 36/60 (60%), Positives = 46/60 (76%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ EH F+++DTGG+
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRSRDALVADYPGLTRDRQYGQAEVEEHPFIVIDTGGI 60
Score = 156 (60.0 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 43/151 (28%), Positives = 71/151 (47%)
Query: 371 IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGI 430
+P +A+VGRPNVGKS++ N L +V+ G TRD + E F +IDT GI
Sbjct: 2 LPVVALVGRPNVGKSTLFNRLTRSRDALVADYPGLTRDRQYGQ-AEVEEHPFIVIDTGGI 60
Query: 431 RKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCL 490
+ ++ AI +D V +++A +T D IA+ + ++ K
Sbjct: 61 N------GDEQGIDVKMAEQSLMAIEEADAVLFLVDARDGLTAADHGIADHLRKQNKKIF 114
Query: 491 IVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
+V NK D I + + A +Y + E + +
Sbjct: 115 VVANKIDGI-HGDSAVAEFYSLGLGEHVHQI 144
Score = 155 (59.6 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E+ L+DT G+
Sbjct: 214 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSVYIPMERNGREYTLIDTAGIRR- 272
Query: 225 SKSQPNIMEDLAITTTI 241
K+ +++E ++ T+
Sbjct: 273 RKNVTDVVEKYSVIKTL 289
Score = 138 (53.6 bits), Expect = 2.1e-65, Sum P(3) = 2.1e-65
Identities = 38/88 (43%), Positives = 51/88 (57%)
Query: 265 QATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS 324
Q+ AIEE+ ++FLVD + GLTAAD IAD LRK +K I + NK + G V+
Sbjct: 74 QSLMAIEEADAVLFLVDARDGLTAADHGIADHLRKQ--NKKIFVVANKIDGIH-GDSAVA 130
Query: 325 EFWSLGFSPL--PISAISGTGTGELLDL 350
EF+SLG I+A G G +LL +
Sbjct: 131 EFYSLGLGEHVHQIAAAHGRGVTQLLTI 158
>TIGR_CMR|CPS_4247 [details] [associations]
symbol:CPS_4247 "GTP-binding protein EngA" species:167879
"Colwellia psychrerythraea 34H" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
RefSeq:YP_270897.1 ProteinModelPortal:Q47WC5 STRING:Q47WC5
GeneID:3520024 KEGG:cps:CPS_4247 PATRIC:21471359
HOGENOM:HOG000242862 BioCyc:CPSY167879:GI48-4257-MONOMER
Uniprot:Q47WC5
Length = 498
Score = 372 (136.0 bits), Expect = 2.1e-65, Sum P(3) = 2.1e-65
Identities = 93/312 (29%), Positives = 162/312 (51%)
Query: 349 DLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRD 408
D+ +E + + ED +E ++I +AI+GRPNVGKS++ N ++GE+R +V + GTTRD
Sbjct: 191 DVELTEEELAKKLEDEPQENDKIK-LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRD 249
Query: 409 AIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAM 468
++ G+++ LIDTAGIR+R + E SV + RAI ++V L+I+A
Sbjct: 250 SVYIPMER-NGREYTLIDTAGIRRRKNVTD---VVEKYSVIKTLRAIEDANVCLLIIDAQ 305
Query: 469 ACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVY 528
I++QD + I + G+ ++ VNKWD + + + + ++ +L +D+A + +
Sbjct: 306 EGISDQDLSLLGFILEAGRSLVLAVNKWDGLEDHEKDRI---KTELDRRLGFIDFARVHF 362
Query: 529 STAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPXXXXXXXXXVYYCT 588
+A+ G V + + E ++R+STA + +++ AV PP + Y
Sbjct: 363 ISALHGTGVGHLYESVEEAFVSATKRISTAMVTKILDMAVFDHQPPLHQGRRIK-LKYAH 421
Query: 589 QAAVRPPTFVFFVNDAKLFPETYRRYMEKQLRADAGFSGTPIRLLWRS-------RRKME 641
PP + N AK P +Y+RY+ R GTPIR+ ++ ++K+
Sbjct: 422 AGGYNPPIIIIHGNSAKKLPMSYKRYLMNYYRKSLKMMGTPIRIQFKDTLNPFAGKKKLN 481
Query: 642 MKEGKSASR-TQ 652
E K +R TQ
Sbjct: 482 YTEQKKIARATQ 493
Score = 193 (73.0 bits), Expect = 2.1e-65, Sum P(3) = 2.1e-65
Identities = 36/60 (60%), Positives = 46/60 (76%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ EH F+++DTGG+
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRSRDALVADYPGLTRDRQYGQAEVEEHPFIVIDTGGI 60
Score = 156 (60.0 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 43/151 (28%), Positives = 71/151 (47%)
Query: 371 IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGI 430
+P +A+VGRPNVGKS++ N L +V+ G TRD + E F +IDT GI
Sbjct: 2 LPVVALVGRPNVGKSTLFNRLTRSRDALVADYPGLTRDRQYGQ-AEVEEHPFIVIDTGGI 60
Query: 431 RKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCL 490
+ ++ AI +D V +++A +T D IA+ + ++ K
Sbjct: 61 N------GDEQGIDVKMAEQSLMAIEEADAVLFLVDARDGLTAADHGIADHLRKQNKKIF 114
Query: 491 IVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
+V NK D I + + A +Y + E + +
Sbjct: 115 VVANKIDGI-HGDSAVAEFYSLGLGEHVHQI 144
Score = 155 (59.6 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E+ L+DT G+
Sbjct: 214 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSVYIPMERNGREYTLIDTAGIRR- 272
Query: 225 SKSQPNIMEDLAITTTI 241
K+ +++E ++ T+
Sbjct: 273 RKNVTDVVEKYSVIKTL 289
Score = 138 (53.6 bits), Expect = 2.1e-65, Sum P(3) = 2.1e-65
Identities = 38/88 (43%), Positives = 51/88 (57%)
Query: 265 QATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS 324
Q+ AIEE+ ++FLVD + GLTAAD IAD LRK +K I + NK + G V+
Sbjct: 74 QSLMAIEEADAVLFLVDARDGLTAADHGIADHLRKQ--NKKIFVVANKIDGIH-GDSAVA 130
Query: 325 EFWSLGFSPL--PISAISGTGTGELLDL 350
EF+SLG I+A G G +LL +
Sbjct: 131 EFYSLGLGEHVHQIAAAHGRGVTQLLTI 158
>UNIPROTKB|Q2GGW4 [details] [associations]
symbol:engA "GTPase Der" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_507319.1 ProteinModelPortal:Q2GGW4
STRING:Q2GGW4 GeneID:3927981 KEGG:ech:ECH_0504 PATRIC:20576480
BioCyc:ECHA205920:GJNR-506-MONOMER Uniprot:Q2GGW4
Length = 442
Score = 530 (191.6 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 140/385 (36%), Positives = 215/385 (55%)
Query: 257 RMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESP 316
++ S++ Q +IEES +I F+VD + + E A +LRK + K IIL NKCES
Sbjct: 64 KLSSLVLDQVKLSIEESDIIFFVVDARIEHDDKNIEFAKYLRKK-VKKPIILIANKCESQ 122
Query: 317 RK--GIMQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVE-GTEDLVEEENRIPA 373
++ I + F +G P+ ISA G +L + + +K+ + T DL + I
Sbjct: 123 KRCYSIDYLGYFDFIG--PVYISAEHNLGLVDLYEALLPFIKEYDLNTLDL----HNIK- 175
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
++IVGRPN GKS+ +N L+ E+R IVSP GTTRD+ID E+T GQKF LIDTAG+RK+
Sbjct: 176 LSIVGRPNAGKSTFINRLLAENRMIVSPEPGTTRDSIDVEYTY-RGQKFTLIDTAGMRKK 234
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVV 493
A + S E SV++ +I RSD+V L+I+++ I +QD IAE Q+GK +I +
Sbjct: 235 AKVTES---IEVTSVHKTIESINRSDIVILMIDSVYGIEQQDLSIAELAIQKGKAIIIAL 291
Query: 494 NKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSR 553
NKWD I K++ +D+ + P++ +A+ + +KII + + K +
Sbjct: 292 NKWDMIAKKDRSELL---KDICNYNKLNFKVPVIEVSALKNINCNKIIETSIELYKCLTM 348
Query: 554 RLSTATINQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLFPETYRR 613
R+ST+ +N+ ++ AV + PP + Y TQ V PPTF+ VN + TYR+
Sbjct: 349 RISTSVLNKWLKLAVEYHKPPLCNGKVVK-IKYITQVKVIPPTFIAVVNGSYSIDLTYRQ 407
Query: 614 YMEKQLRADAGFSGTPIRLLWRSRR 638
Y+ LR G PIRL ++ +
Sbjct: 408 YLMSSLRKHFSIDGIPIRLNFKKNK 432
Score = 147 (56.8 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVG PNVGKS +FNRL AIV + P +TRDR G + +F +VDTGGV N
Sbjct: 3 KIAIVGLPNVGKSTIFNRLTSQKSAIVSNIPNLTRDRREGDADLCGLKFKIVDTGGVDNT 62
Query: 225 SKSQPNIMEDLAIT 238
K +++ + ++
Sbjct: 63 IKLSSLVLDQVKLS 76
Score = 140 (54.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 39/126 (30%), Positives = 69/126 (54%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
IAIVG PNVGKS+I N L + IVS I TRD + + G KF+++DT G+
Sbjct: 4 IAIVGLPNVGKSTIFNRLTSQKSAIVSNIPNLTRDRREGD-ADLCGLKFKIVDTGGVDNT 62
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVV 493
++S L +++ +I SD++ V++A +++ A+ + ++ K +I++
Sbjct: 63 IKLSS-------LVLDQVKLSIEESDIIFFVVDARIEHDDKNIEFAKYLRKKVKKPIILI 115
Query: 494 -NKWDT 498
NK ++
Sbjct: 116 ANKCES 121
Score = 138 (53.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+++IVGRPN GKS NRL+ NR IV EPG TRD + + +F L+DT G+
Sbjct: 175 KLSIVGRPNAGKSTFINRLLAENRMIVSPEPGTTRDSIDVEYTYRGQKFTLIDTAGMRKK 234
Query: 225 SKSQPNIMEDLAITTTI 241
+K +I E ++ TI
Sbjct: 235 AKVTESI-EVTSVHKTI 250
>TIGR_CMR|ECH_0504 [details] [associations]
symbol:ECH_0504 "GTP-binding protein EngA" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_507319.1 ProteinModelPortal:Q2GGW4
STRING:Q2GGW4 GeneID:3927981 KEGG:ech:ECH_0504 PATRIC:20576480
BioCyc:ECHA205920:GJNR-506-MONOMER Uniprot:Q2GGW4
Length = 442
Score = 530 (191.6 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 140/385 (36%), Positives = 215/385 (55%)
Query: 257 RMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESP 316
++ S++ Q +IEES +I F+VD + + E A +LRK + K IIL NKCES
Sbjct: 64 KLSSLVLDQVKLSIEESDIIFFVVDARIEHDDKNIEFAKYLRKK-VKKPIILIANKCESQ 122
Query: 317 RK--GIMQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVE-GTEDLVEEENRIPA 373
++ I + F +G P+ ISA G +L + + +K+ + T DL + I
Sbjct: 123 KRCYSIDYLGYFDFIG--PVYISAEHNLGLVDLYEALLPFIKEYDLNTLDL----HNIK- 175
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
++IVGRPN GKS+ +N L+ E+R IVSP GTTRD+ID E+T GQKF LIDTAG+RK+
Sbjct: 176 LSIVGRPNAGKSTFINRLLAENRMIVSPEPGTTRDSIDVEYTY-RGQKFTLIDTAGMRKK 234
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVV 493
A + S E SV++ +I RSD+V L+I+++ I +QD IAE Q+GK +I +
Sbjct: 235 AKVTES---IEVTSVHKTIESINRSDIVILMIDSVYGIEQQDLSIAELAIQKGKAIIIAL 291
Query: 494 NKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSR 553
NKWD I K++ +D+ + P++ +A+ + +KII + + K +
Sbjct: 292 NKWDMIAKKDRSELL---KDICNYNKLNFKVPVIEVSALKNINCNKIIETSIELYKCLTM 348
Query: 554 RLSTATINQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLFPETYRR 613
R+ST+ +N+ ++ AV + PP + Y TQ V PPTF+ VN + TYR+
Sbjct: 349 RISTSVLNKWLKLAVEYHKPPLCNGKVVK-IKYITQVKVIPPTFIAVVNGSYSIDLTYRQ 407
Query: 614 YMEKQLRADAGFSGTPIRLLWRSRR 638
Y+ LR G PIRL ++ +
Sbjct: 408 YLMSSLRKHFSIDGIPIRLNFKKNK 432
Score = 147 (56.8 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVG PNVGKS +FNRL AIV + P +TRDR G + +F +VDTGGV N
Sbjct: 3 KIAIVGLPNVGKSTIFNRLTSQKSAIVSNIPNLTRDRREGDADLCGLKFKIVDTGGVDNT 62
Query: 225 SKSQPNIMEDLAIT 238
K +++ + ++
Sbjct: 63 IKLSSLVLDQVKLS 76
Score = 140 (54.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 39/126 (30%), Positives = 69/126 (54%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
IAIVG PNVGKS+I N L + IVS I TRD + + G KF+++DT G+
Sbjct: 4 IAIVGLPNVGKSTIFNRLTSQKSAIVSNIPNLTRDRREGD-ADLCGLKFKIVDTGGVDNT 62
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVV 493
++S L +++ +I SD++ V++A +++ A+ + ++ K +I++
Sbjct: 63 IKLSS-------LVLDQVKLSIEESDIIFFVVDARIEHDDKNIEFAKYLRKKVKKPIILI 115
Query: 494 -NKWDT 498
NK ++
Sbjct: 116 ANKCES 121
Score = 138 (53.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+++IVGRPN GKS NRL+ NR IV EPG TRD + + +F L+DT G+
Sbjct: 175 KLSIVGRPNAGKSTFINRLLAENRMIVSPEPGTTRDSIDVEYTYRGQKFTLIDTAGMRKK 234
Query: 225 SKSQPNIMEDLAITTTI 241
+K +I E ++ TI
Sbjct: 235 AKVTESI-EVTSVHKTI 250
>UNIPROTKB|Q74AX4 [details] [associations]
symbol:der "GTPase Der" species:243231 "Geobacter
sulfurreducens PCA" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE017180
GenomeReviews:AE017180_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_953274.1 ProteinModelPortal:Q74AX4
GeneID:2687605 KEGG:gsu:GSU2225 PATRIC:22027305
BioCyc:GSUL243231:GH27-2172-MONOMER Uniprot:Q74AX4
Length = 438
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 159/452 (35%), Positives = 243/452 (53%)
Query: 191 VVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLA--ITTTIGMEGIPL 248
+V P V + ++ R G + ++ D GV + D+ + T G E P
Sbjct: 8 IVGRPNVGKSTLFNRLV-GRRKAIVDDMPGVTRDRNYETVTRFDVPFILIDTGGFE--P- 63
Query: 249 ATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIIL 308
E++ R+ + Q+ A+EE+ VI+FL+DG+AGL AD E+ + LR+ +DK +
Sbjct: 64 ---ESS-DRLLQQMREQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRR--VDKPVFF 117
Query: 309 AVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGTGELLDLVCSELKKVEGTEDLVEE 367
VNK + + SEF+SLG L ISA G +L+D V + L + E
Sbjct: 118 VVNKVDGETLEVA-ASEFYSLGVDNLLTISAEHNRGVRDLMDEVVAALPQ----RTTSPE 172
Query: 368 ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDT 427
E IA+VGRPNVGKSS++N L+G +R + +P GTTRD++DT FT + +++ LIDT
Sbjct: 173 ERNATKIAVVGRPNVGKSSLVNRLLGYERVVANPTPGTTRDSVDTWFTCNK-KRYLLIDT 231
Query: 428 AGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGK 487
AGIR++ E SV + R+I R+DVV +V+ A +TEQD RIA + GK
Sbjct: 232 AGIRRKGKTTQK---IEKYSVVDSLRSIERADVVLIVLNAEEGVTEQDERIAGYAFEAGK 288
Query: 488 GCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMV 547
C+ VVNKWD I N + ++ +R + + L + PIV+ +A GQ +++I+ E V
Sbjct: 289 ACIFVVNKWDAIEKDNSSVGRFVDK-IRTEFKYLAFVPIVFVSAKTGQRLNRIMEEVEKV 347
Query: 548 DKERSRRLSTATINQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLF 607
+ +R++T+ +N++ AV P Y+ TQ RPPTFV F N
Sbjct: 348 MAQYVKRVTTSELNRIFSAAVESHHHPLVMGRRVKF-YFATQVGTRPPTFVIFTNRPDGM 406
Query: 608 PETYRRYMEKQLRADAGFSGTPIRLLWRSRRK 639
+Y RY+ + R F+GTP+RLL+R R +
Sbjct: 407 HFSYERYLVNKFREAFDFTGTPLRLLFRGRER 438
Score = 189 (71.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 51/134 (38%), Positives = 74/134 (55%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNRLVG +AIV D PGVTRDR Y + F+L+DTGG
Sbjct: 2 ILPIVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFDVPFILIDTGGF 61
Query: 222 LNVSKSQPNIMEDLAITTTIGME--GIPLATREAAVARMPSMIER-QATAAIEESCV-II 277
+S +++ + + + ME + L + P+ +E + +++ ++
Sbjct: 62 --EPESSDRLLQQMREQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRRVDKPVFFVV 119
Query: 278 FLVDGQAGLTAADE 291
VDG+ AA E
Sbjct: 120 NKVDGETLEVAASE 133
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 371 IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGI 430
+P +AIVGRPNVGKS++ N LVG + IV + G TRD + E F LIDT G
Sbjct: 3 LPIVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDR-NYETVTRFDVPFILIDTGGF 61
Query: 431 RKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCL 490
SS + + ++ A+ +DV+ +++ A + D + E + + K
Sbjct: 62 EPE----SSDRLLQQMR-EQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRRVDKPVF 116
Query: 491 IVVNKWD 497
VVNK D
Sbjct: 117 FVVNKVD 123
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A+VGRPNVGKS+L NRL+G R + PG TRD + + ++L+DT G+
Sbjct: 178 KIAVVGRPNVGKSSLVNRLLGYERVVANPTPGTTRDSVDTWFTCNKKRYLLIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGME--GIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
K+ I + + + +E + L A + ER A A E IF+V+
Sbjct: 238 GKTTQKIEKYSVVDSLRSIERADVVLIVLNAEEG-VTEQDERIAGYAFEAGKACIFVVN 295
>TIGR_CMR|GSU_2225 [details] [associations]
symbol:GSU_2225 "GTP-binding protein Era, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE017180
GenomeReviews:AE017180_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_953274.1 ProteinModelPortal:Q74AX4
GeneID:2687605 KEGG:gsu:GSU2225 PATRIC:22027305
BioCyc:GSUL243231:GH27-2172-MONOMER Uniprot:Q74AX4
Length = 438
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 159/452 (35%), Positives = 243/452 (53%)
Query: 191 VVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLA--ITTTIGMEGIPL 248
+V P V + ++ R G + ++ D GV + D+ + T G E P
Sbjct: 8 IVGRPNVGKSTLFNRLV-GRRKAIVDDMPGVTRDRNYETVTRFDVPFILIDTGGFE--P- 63
Query: 249 ATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIIL 308
E++ R+ + Q+ A+EE+ VI+FL+DG+AGL AD E+ + LR+ +DK +
Sbjct: 64 ---ESS-DRLLQQMREQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRR--VDKPVFF 117
Query: 309 AVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGTGELLDLVCSELKKVEGTEDLVEE 367
VNK + + SEF+SLG L ISA G +L+D V + L + E
Sbjct: 118 VVNKVDGETLEVA-ASEFYSLGVDNLLTISAEHNRGVRDLMDEVVAALPQ----RTTSPE 172
Query: 368 ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDT 427
E IA+VGRPNVGKSS++N L+G +R + +P GTTRD++DT FT + +++ LIDT
Sbjct: 173 ERNATKIAVVGRPNVGKSSLVNRLLGYERVVANPTPGTTRDSVDTWFTCNK-KRYLLIDT 231
Query: 428 AGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGK 487
AGIR++ E SV + R+I R+DVV +V+ A +TEQD RIA + GK
Sbjct: 232 AGIRRKGKTTQK---IEKYSVVDSLRSIERADVVLIVLNAEEGVTEQDERIAGYAFEAGK 288
Query: 488 GCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMV 547
C+ VVNKWD I N + ++ +R + + L + PIV+ +A GQ +++I+ E V
Sbjct: 289 ACIFVVNKWDAIEKDNSSVGRFVDK-IRTEFKYLAFVPIVFVSAKTGQRLNRIMEEVEKV 347
Query: 548 DKERSRRLSTATINQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLF 607
+ +R++T+ +N++ AV P Y+ TQ RPPTFV F N
Sbjct: 348 MAQYVKRVTTSELNRIFSAAVESHHHPLVMGRRVKF-YFATQVGTRPPTFVIFTNRPDGM 406
Query: 608 PETYRRYMEKQLRADAGFSGTPIRLLWRSRRK 639
+Y RY+ + R F+GTP+RLL+R R +
Sbjct: 407 HFSYERYLVNKFREAFDFTGTPLRLLFRGRER 438
Score = 189 (71.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 51/134 (38%), Positives = 74/134 (55%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNRLVG +AIV D PGVTRDR Y + F+L+DTGG
Sbjct: 2 ILPIVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFDVPFILIDTGGF 61
Query: 222 LNVSKSQPNIMEDLAITTTIGME--GIPLATREAAVARMPSMIER-QATAAIEESCV-II 277
+S +++ + + + ME + L + P+ +E + +++ ++
Sbjct: 62 --EPESSDRLLQQMREQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRRVDKPVFFVV 119
Query: 278 FLVDGQAGLTAADE 291
VDG+ AA E
Sbjct: 120 NKVDGETLEVAASE 133
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 371 IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGI 430
+P +AIVGRPNVGKS++ N LVG + IV + G TRD + E F LIDT G
Sbjct: 3 LPIVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDR-NYETVTRFDVPFILIDTGGF 61
Query: 431 RKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCL 490
SS + + ++ A+ +DV+ +++ A + D + E + + K
Sbjct: 62 EPE----SSDRLLQQMR-EQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRRVDKPVF 116
Query: 491 IVVNKWD 497
VVNK D
Sbjct: 117 FVVNKVD 123
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A+VGRPNVGKS+L NRL+G R + PG TRD + + ++L+DT G+
Sbjct: 178 KIAVVGRPNVGKSSLVNRLLGYERVVANPTPGTTRDSVDTWFTCNKKRYLLIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGME--GIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
K+ I + + + +E + L A + ER A A E IF+V+
Sbjct: 238 GKTTQKIEKYSVVDSLRSIERADVVLIVLNAEEG-VTEQDERIAGYAFEAGKACIFVVN 295
>UNIPROTKB|Q2GKV6 [details] [associations]
symbol:der "GTPase Der" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HOGENOM:HOG000242862
RefSeq:YP_504995.1 ProteinModelPortal:Q2GKV6 STRING:Q2GKV6
GeneID:3931157 KEGG:aph:APH_0390 PATRIC:20949388 OMA:RKKAIVH
BioCyc:APHA212042:GHPM-418-MONOMER Uniprot:Q2GKV6
Length = 440
Score = 495 (179.3 bits), Expect = 2.6e-59, Sum P(2) = 2.6e-59
Identities = 126/403 (31%), Positives = 215/403 (53%)
Query: 236 AITTTIGMEGIPLATREAAVA-RMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIA 294
A+ G+ I + T A + S+++ Q A+E + V++F++D Q + +
Sbjct: 42 ALVDFCGLRFIAIDTGGVADGGEIQSLVKTQVQLALENADVVLFVIDAQRATDSHSTSLG 101
Query: 295 DWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGTGELLDLVCS 353
WL K +K IIL NKCES + + V LGF P+ ISA G +L + +
Sbjct: 102 KWLSK-ITNKPIILVANKCESNKNNV-HVDTMEYLGFLGPVYISAEHNLGMADLYEAIAP 159
Query: 354 ELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTE 413
+E +E ++++R AI+I+G+PNVGKS+ +N+++GE+R I S I+GTTRD+I E
Sbjct: 160 ---LIEQSERPKKDQDRPIAISIIGQPNVGKSTFVNSILGEERVITSGIAGTTRDSISAE 216
Query: 414 FTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITE 473
++ +G L DTAGIRKR + + E LSV A A+ +S VV L+++ I++
Sbjct: 217 YSY-KGITLLLTDTAGIRKRTKVTEN---MEKLSVQSAIHALSKSHVVILIVDFTQGISQ 272
Query: 474 QDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALDW-APIVYSTAI 532
QD IA ++GKG ++ +NK D + +K + A +R+ R +D+ PI+ +A+
Sbjct: 273 QDLSIASTAIKDGKGIVLALNKADLVNDKAAEDAIL--NAIRQYSR-VDFDVPIMKMSAL 329
Query: 533 AGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAV 592
DK++ A + + S +ST+ +N+ + A+ + PP + Y +Q +
Sbjct: 330 ENIGCDKVLSKAVKIYESASTHISTSKLNKWLGTAIDYH-PPHLQNKKKVRLKYISQVST 388
Query: 593 RPPTFVFFVNDAKLFPETYRRYMEKQLRADAGFSGTPIRLLWR 635
PPTFV N ++ TY+ Y++ G PIR++++
Sbjct: 389 LPPTFVIATNSTEV-ESTYQTYLKNSFLKHFSMQGVPIRMIFK 430
Score = 137 (53.3 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 53/196 (27%), Positives = 90/196 (45%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDT--EFTGPEGQKFRLIDTAGIR 431
+AIVG PNVGKS++ N L IVS I+ TRD + +F G +F IDT G+
Sbjct: 4 VAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCG---LRFIAIDTGGV- 59
Query: 432 KRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQ-EGKGCL 490
+ G ++L + A+ +DVV VI+A + + + + K +
Sbjct: 60 ------ADGGEIQSLVKTQVQLALENADVVLFVIDAQRATDSHSTSLGKWLSKITNKPII 113
Query: 491 IVVNKWDTIPNKNQQTATYYEQDVREKLRALD--WAPIVYSTAIAG--QSVDKIIVAAEM 546
+V NK ++ NKN D E L L + ++ +A +++ +I +E
Sbjct: 114 LVANKCES--NKNN-----VHVDTMEYLGFLGPVYISAEHNLGMADLYEAIAPLIEQSER 166
Query: 547 VDKERSRRLSTATINQ 562
K++ R ++ + I Q
Sbjct: 167 PKKDQDRPIAISIIGQ 182
Score = 131 (51.2 bits), Expect = 2.6e-59, Sum P(2) = 2.6e-59
Identities = 34/67 (50%), Positives = 40/67 (59%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGV 221
+ +VAIVG PNVGKS LFNRL AIV D VTRDR F G F+ +DTGGV
Sbjct: 1 MQKVAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCGLR-FIAIDTGGV 59
Query: 222 LNVSKSQ 228
+ + Q
Sbjct: 60 ADGGEIQ 66
>TIGR_CMR|APH_0390 [details] [associations]
symbol:APH_0390 "putative GTP-binding protein EngA"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HOGENOM:HOG000242862
RefSeq:YP_504995.1 ProteinModelPortal:Q2GKV6 STRING:Q2GKV6
GeneID:3931157 KEGG:aph:APH_0390 PATRIC:20949388 OMA:RKKAIVH
BioCyc:APHA212042:GHPM-418-MONOMER Uniprot:Q2GKV6
Length = 440
Score = 495 (179.3 bits), Expect = 2.6e-59, Sum P(2) = 2.6e-59
Identities = 126/403 (31%), Positives = 215/403 (53%)
Query: 236 AITTTIGMEGIPLATREAAVA-RMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIA 294
A+ G+ I + T A + S+++ Q A+E + V++F++D Q + +
Sbjct: 42 ALVDFCGLRFIAIDTGGVADGGEIQSLVKTQVQLALENADVVLFVIDAQRATDSHSTSLG 101
Query: 295 DWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGTGELLDLVCS 353
WL K +K IIL NKCES + + V LGF P+ ISA G +L + +
Sbjct: 102 KWLSK-ITNKPIILVANKCESNKNNV-HVDTMEYLGFLGPVYISAEHNLGMADLYEAIAP 159
Query: 354 ELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTE 413
+E +E ++++R AI+I+G+PNVGKS+ +N+++GE+R I S I+GTTRD+I E
Sbjct: 160 ---LIEQSERPKKDQDRPIAISIIGQPNVGKSTFVNSILGEERVITSGIAGTTRDSISAE 216
Query: 414 FTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITE 473
++ +G L DTAGIRKR + + E LSV A A+ +S VV L+++ I++
Sbjct: 217 YSY-KGITLLLTDTAGIRKRTKVTEN---MEKLSVQSAIHALSKSHVVILIVDFTQGISQ 272
Query: 474 QDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALDW-APIVYSTAI 532
QD IA ++GKG ++ +NK D + +K + A +R+ R +D+ PI+ +A+
Sbjct: 273 QDLSIASTAIKDGKGIVLALNKADLVNDKAAEDAIL--NAIRQYSR-VDFDVPIMKMSAL 329
Query: 533 AGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAV 592
DK++ A + + S +ST+ +N+ + A+ + PP + Y +Q +
Sbjct: 330 ENIGCDKVLSKAVKIYESASTHISTSKLNKWLGTAIDYH-PPHLQNKKKVRLKYISQVST 388
Query: 593 RPPTFVFFVNDAKLFPETYRRYMEKQLRADAGFSGTPIRLLWR 635
PPTFV N ++ TY+ Y++ G PIR++++
Sbjct: 389 LPPTFVIATNSTEV-ESTYQTYLKNSFLKHFSMQGVPIRMIFK 430
Score = 137 (53.3 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 53/196 (27%), Positives = 90/196 (45%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDT--EFTGPEGQKFRLIDTAGIR 431
+AIVG PNVGKS++ N L IVS I+ TRD + +F G +F IDT G+
Sbjct: 4 VAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCG---LRFIAIDTGGV- 59
Query: 432 KRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQ-EGKGCL 490
+ G ++L + A+ +DVV VI+A + + + + K +
Sbjct: 60 ------ADGGEIQSLVKTQVQLALENADVVLFVIDAQRATDSHSTSLGKWLSKITNKPII 113
Query: 491 IVVNKWDTIPNKNQQTATYYEQDVREKLRALD--WAPIVYSTAIAG--QSVDKIIVAAEM 546
+V NK ++ NKN D E L L + ++ +A +++ +I +E
Sbjct: 114 LVANKCES--NKNN-----VHVDTMEYLGFLGPVYISAEHNLGMADLYEAIAPLIEQSER 166
Query: 547 VDKERSRRLSTATINQ 562
K++ R ++ + I Q
Sbjct: 167 PKKDQDRPIAISIIGQ 182
Score = 131 (51.2 bits), Expect = 2.6e-59, Sum P(2) = 2.6e-59
Identities = 34/67 (50%), Positives = 40/67 (59%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGV 221
+ +VAIVG PNVGKS LFNRL AIV D VTRDR F G F+ +DTGGV
Sbjct: 1 MQKVAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCGLR-FIAIDTGGV 59
Query: 222 LNVSKSQ 228
+ + Q
Sbjct: 60 ADGGEIQ 66
>UNIPROTKB|Q5LR04 [details] [associations]
symbol:der "GTPase Der" species:246200 "Ruegeria pomeroyi
DSS-3" [GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_167551.1 ProteinModelPortal:Q5LR04
GeneID:3194590 KEGG:sil:SPO2328 PATRIC:23378019 Uniprot:Q5LR04
Length = 487
Score = 412 (150.1 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 96/273 (35%), Positives = 149/273 (54%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+A+VGRPN GKS+++N ++GEDR + P +G TRDAI + + R+ DTAG+RK+
Sbjct: 205 VAVVGRPNAGKSTLINRILGEDRLLTGPEAGITRDAISLQIDWND-TPMRIFDTAGMRKK 263
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVV 493
A + E LSV+ RA++ ++VV ++++A +QD RIA+ E+EG+ +I V
Sbjct: 264 AKVQEK---LEKLSVSDGLRAVKFAEVVVVLLDAAIPFEQQDLRIADLAEREGRAVVIAV 320
Query: 494 NKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSR 553
NKWD NK Q ++ L L AP+V +A G+ ++++ A + +R
Sbjct: 321 NKWDVEENK-QDKLRELKESFERLLPQLRGAPLVTVSAKTGRGLERLHDAILRAHEVWNR 379
Query: 554 RLSTATINQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLFPETYRR 613
R+ TA +N+ + + + PP + Y TQA RPP FV + PE+Y R
Sbjct: 380 RIPTAALNRWLIGMLE-QHPPPAPQGKRIKLRYMTQAKTRPPGFVVMCSHPDKMPESYSR 438
Query: 614 YMEKQLRADAGFSGTPIRLLWRSRRKMEMKEGK 646
Y+ LRAD GTPIRL R + +G+
Sbjct: 439 YLVNGLRADFDMPGTPIRLTLRGQGDKNPYKGR 471
Score = 165 (63.1 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 33/56 (58%), Positives = 42/56 (75%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+AIVGRPNVGKS LFNRLVG A+V D+PGVTRD G++ G+ F ++DT G+
Sbjct: 5 LAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGDLRFTVIDTAGL 60
Score = 147 (56.8 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 48/158 (30%), Positives = 75/158 (47%)
Query: 191 VVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLAT 250
+V P V + ++ R G+ ++ D GV + + DL T I G+ AT
Sbjct: 7 IVGRPNVGKSTLFNRLV-GKRLALVDDQPGVTRDLREGQARLGDLRFTV-IDTAGLETAT 64
Query: 251 REAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAV 310
++ RM + ER A++ + + +F++D +AG+T DE AD LR+ +ILA
Sbjct: 65 DDSLQGRMRRLTER----AVDMADICLFMIDARAGVTPNDEIFADILRRR--SAHVILAA 118
Query: 311 NKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGTGEL 347
NK E V E + LG P+ +SA G G EL
Sbjct: 119 NKAEGAAADA-GVIEAYGLGLGEPIRLSAEHGEGLNEL 155
Score = 141 (54.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 38/122 (31%), Positives = 61/122 (50%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+AIVGRPNVGKS++ N LVG+ +V G TRD + + + +F +IDTAG+
Sbjct: 5 LAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGD-LRFTVIDTAGLETA 63
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVV 493
+ G RA+ +D+ +I+A A +T D A+ + + ++
Sbjct: 64 TDDSLQGRMRRLTE-----RAVDMADICLFMIDARAGVTPNDEIFADILRRRSAHVILAA 118
Query: 494 NK 495
NK
Sbjct: 119 NK 120
Score = 140 (54.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA+VGRPN GKS L NR++G +R + E G+TRD + + W + + DT G+
Sbjct: 204 QVAVVGRPNAGKSTLINRILGEDRLLTGPEAGITRDAISLQIDWNDTPMRIFDTAGMRKK 263
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMI 262
+K Q + E L+++ G+ + A E V + + I
Sbjct: 264 AKVQEKL-EKLSVSD--GLRAVKFA--EVVVVLLDAAI 296
>TIGR_CMR|SPO_2328 [details] [associations]
symbol:SPO_2328 "GTP-binding protein EngA" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_167551.1 ProteinModelPortal:Q5LR04
GeneID:3194590 KEGG:sil:SPO2328 PATRIC:23378019 Uniprot:Q5LR04
Length = 487
Score = 412 (150.1 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 96/273 (35%), Positives = 149/273 (54%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+A+VGRPN GKS+++N ++GEDR + P +G TRDAI + + R+ DTAG+RK+
Sbjct: 205 VAVVGRPNAGKSTLINRILGEDRLLTGPEAGITRDAISLQIDWND-TPMRIFDTAGMRKK 263
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVV 493
A + E LSV+ RA++ ++VV ++++A +QD RIA+ E+EG+ +I V
Sbjct: 264 AKVQEK---LEKLSVSDGLRAVKFAEVVVVLLDAAIPFEQQDLRIADLAEREGRAVVIAV 320
Query: 494 NKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSR 553
NKWD NK Q ++ L L AP+V +A G+ ++++ A + +R
Sbjct: 321 NKWDVEENK-QDKLRELKESFERLLPQLRGAPLVTVSAKTGRGLERLHDAILRAHEVWNR 379
Query: 554 RLSTATINQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLFPETYRR 613
R+ TA +N+ + + + PP + Y TQA RPP FV + PE+Y R
Sbjct: 380 RIPTAALNRWLIGMLE-QHPPPAPQGKRIKLRYMTQAKTRPPGFVVMCSHPDKMPESYSR 438
Query: 614 YMEKQLRADAGFSGTPIRLLWRSRRKMEMKEGK 646
Y+ LRAD GTPIRL R + +G+
Sbjct: 439 YLVNGLRADFDMPGTPIRLTLRGQGDKNPYKGR 471
Score = 165 (63.1 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 33/56 (58%), Positives = 42/56 (75%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+AIVGRPNVGKS LFNRLVG A+V D+PGVTRD G++ G+ F ++DT G+
Sbjct: 5 LAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGDLRFTVIDTAGL 60
Score = 147 (56.8 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 48/158 (30%), Positives = 75/158 (47%)
Query: 191 VVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLAT 250
+V P V + ++ R G+ ++ D GV + + DL T I G+ AT
Sbjct: 7 IVGRPNVGKSTLFNRLV-GKRLALVDDQPGVTRDLREGQARLGDLRFTV-IDTAGLETAT 64
Query: 251 REAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAV 310
++ RM + ER A++ + + +F++D +AG+T DE AD LR+ +ILA
Sbjct: 65 DDSLQGRMRRLTER----AVDMADICLFMIDARAGVTPNDEIFADILRRR--SAHVILAA 118
Query: 311 NKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGTGEL 347
NK E V E + LG P+ +SA G G EL
Sbjct: 119 NKAEGAAADA-GVIEAYGLGLGEPIRLSAEHGEGLNEL 155
Score = 141 (54.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 38/122 (31%), Positives = 61/122 (50%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+AIVGRPNVGKS++ N LVG+ +V G TRD + + + +F +IDTAG+
Sbjct: 5 LAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGD-LRFTVIDTAGLETA 63
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVV 493
+ G RA+ +D+ +I+A A +T D A+ + + ++
Sbjct: 64 TDDSLQGRMRRLTE-----RAVDMADICLFMIDARAGVTPNDEIFADILRRRSAHVILAA 118
Query: 494 NK 495
NK
Sbjct: 119 NK 120
Score = 140 (54.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA+VGRPN GKS L NR++G +R + E G+TRD + + W + + DT G+
Sbjct: 204 QVAVVGRPNAGKSTLINRILGEDRLLTGPEAGITRDAISLQIDWNDTPMRIFDTAGMRKK 263
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMI 262
+K Q + E L+++ G+ + A E V + + I
Sbjct: 264 AKVQEKL-EKLSVSD--GLRAVKFA--EVVVVLLDAAI 296
>UNIPROTKB|Q83C83 [details] [associations]
symbol:der "GTPase Der" species:227377 "Coxiella burnetii
RSA 493" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE016828
GenomeReviews:AE016828_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_820240.1 ProteinModelPortal:Q83C83
PRIDE:Q83C83 GeneID:1209150 KEGG:cbu:CBU_1245 PATRIC:17931225
BioCyc:CBUR227377:GJ7S-1232-MONOMER Uniprot:Q83C83
Length = 443
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 133/373 (35%), Positives = 203/373 (54%)
Query: 261 MIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI 320
+ E Q AI+ES I+FLVD +AGL ADE IA+ LRK K I LAVNK + R +
Sbjct: 71 LAETQVEQAIDESDCILFLVDAKAGLVPADEIIAERLRKK--GKKIFLAVNKADRARAAV 128
Query: 321 MQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGR 379
+Q S+F+ LGF P I+A SG G +L+ V L + ++++E+E I IA++GR
Sbjct: 129 VQ-SDFYKLGFGEPYVIAAASGRGVKDLMTQVLENLPE---EKEVIEKEVGIK-IAMIGR 183
Query: 380 PNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASS 439
PNVGKS+++N L+GE+R IV GTTRD+I F + + + LIDTAGIR+RA I
Sbjct: 184 PNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARND-ENYTLIDTAGIRRRAKIQDY 242
Query: 440 GSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTI 499
E S+ ++ +A+ +DVV +++A +TEQD R+ RI + G +I VNKWD +
Sbjct: 243 ---VEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEAGVSLIIAVNKWDGL 299
Query: 500 PNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTAT 559
N + + ++ +D+A + +A+ G V K+ A + + + L+T
Sbjct: 300 ---NIEERDNVRNAIDRRMPFVDFARRYFISALHGTGVGKLFRAIQESYQSIQQELTTGQ 356
Query: 560 INQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLFPETYRRYMEKQL 619
+ + +++AVA PP + Y A P T V K P++Y RY+
Sbjct: 357 LTRALEKAVAEHEPPLVKGRRIR-LRYAHLGARHPLTIVVHGKQTKSLPQSYSRYLANYF 415
Query: 620 RADAGFSGTPIRL 632
R F G P+ +
Sbjct: 416 RKTFNFIGVPVHI 428
Score = 191 (72.3 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 47/150 (31%), Positives = 74/150 (49%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AIVGRPNVGKS LFN L A+V D PGVTRDR YG + +LVDTGG+
Sbjct: 1 MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGL 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
++ + + + + I L +A +P+ + + + IFL
Sbjct: 61 VDTENKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPA--DEIIAERLRKKGKKIFLAV 118
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVN 311
+A A +D+ + + + ++I A +
Sbjct: 119 NKADRARAAVVQSDFYKLGFGEPYVIAAAS 148
Score = 184 (69.8 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 45/127 (35%), Positives = 69/127 (54%)
Query: 371 IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGI 430
+P IAIVGRPNVGKS++ N L +V+ + G TRD E T + Q+ L+DT G+
Sbjct: 2 LPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETT-IDSQRLLLVDTGGL 60
Query: 431 RKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCL 490
+ + L+ + +AI SD + +++A A + D IAER+ ++GK
Sbjct: 61 -----VDTENKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPADEIIAERLRKKGKKIF 115
Query: 491 IVVNKWD 497
+ VNK D
Sbjct: 116 LAVNKAD 122
Score = 158 (60.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++GRPNVGKS L NRL+G R IV D+PG TRD +Y + + L+DT G+
Sbjct: 177 KIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLIDTAGIRRR 236
Query: 225 SKSQ 228
+K Q
Sbjct: 237 AKIQ 240
>TIGR_CMR|CBU_1245 [details] [associations]
symbol:CBU_1245 "GTP-binding protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE016828
GenomeReviews:AE016828_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_820240.1 ProteinModelPortal:Q83C83
PRIDE:Q83C83 GeneID:1209150 KEGG:cbu:CBU_1245 PATRIC:17931225
BioCyc:CBUR227377:GJ7S-1232-MONOMER Uniprot:Q83C83
Length = 443
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 133/373 (35%), Positives = 203/373 (54%)
Query: 261 MIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI 320
+ E Q AI+ES I+FLVD +AGL ADE IA+ LRK K I LAVNK + R +
Sbjct: 71 LAETQVEQAIDESDCILFLVDAKAGLVPADEIIAERLRKK--GKKIFLAVNKADRARAAV 128
Query: 321 MQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGR 379
+Q S+F+ LGF P I+A SG G +L+ V L + ++++E+E I IA++GR
Sbjct: 129 VQ-SDFYKLGFGEPYVIAAASGRGVKDLMTQVLENLPE---EKEVIEKEVGIK-IAMIGR 183
Query: 380 PNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASS 439
PNVGKS+++N L+GE+R IV GTTRD+I F + + + LIDTAGIR+RA I
Sbjct: 184 PNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARND-ENYTLIDTAGIRRRAKIQDY 242
Query: 440 GSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTI 499
E S+ ++ +A+ +DVV +++A +TEQD R+ RI + G +I VNKWD +
Sbjct: 243 ---VEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEAGVSLIIAVNKWDGL 299
Query: 500 PNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTAT 559
N + + ++ +D+A + +A+ G V K+ A + + + L+T
Sbjct: 300 ---NIEERDNVRNAIDRRMPFVDFARRYFISALHGTGVGKLFRAIQESYQSIQQELTTGQ 356
Query: 560 INQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLFPETYRRYMEKQL 619
+ + +++AVA PP + Y A P T V K P++Y RY+
Sbjct: 357 LTRALEKAVAEHEPPLVKGRRIR-LRYAHLGARHPLTIVVHGKQTKSLPQSYSRYLANYF 415
Query: 620 RADAGFSGTPIRL 632
R F G P+ +
Sbjct: 416 RKTFNFIGVPVHI 428
Score = 191 (72.3 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 47/150 (31%), Positives = 74/150 (49%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AIVGRPNVGKS LFN L A+V D PGVTRDR YG + +LVDTGG+
Sbjct: 1 MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGL 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
++ + + + + I L +A +P+ + + + IFL
Sbjct: 61 VDTENKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPA--DEIIAERLRKKGKKIFLAV 118
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVN 311
+A A +D+ + + + ++I A +
Sbjct: 119 NKADRARAAVVQSDFYKLGFGEPYVIAAAS 148
Score = 184 (69.8 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 45/127 (35%), Positives = 69/127 (54%)
Query: 371 IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGI 430
+P IAIVGRPNVGKS++ N L +V+ + G TRD E T + Q+ L+DT G+
Sbjct: 2 LPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETT-IDSQRLLLVDTGGL 60
Query: 431 RKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCL 490
+ + L+ + +AI SD + +++A A + D IAER+ ++GK
Sbjct: 61 -----VDTENKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPADEIIAERLRKKGKKIF 115
Query: 491 IVVNKWD 497
+ VNK D
Sbjct: 116 LAVNKAD 122
Score = 158 (60.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++GRPNVGKS L NRL+G R IV D+PG TRD +Y + + L+DT G+
Sbjct: 177 KIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLIDTAGIRRR 236
Query: 225 SKSQ 228
+K Q
Sbjct: 237 AKIQ 240
>UNIPROTKB|P64057 [details] [associations]
symbol:der "GTPase Der" species:1773 "Mycobacterium
tuberculosis" [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0042254 EMBL:BX842577 GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:H70504 RefSeq:NP_216229.1 RefSeq:NP_336210.1
RefSeq:YP_006515108.1 ProteinModelPortal:P64057 SMR:P64057
PRIDE:P64057 EnsemblBacteria:EBMYCT00000000320
EnsemblBacteria:EBMYCT00000071863 GeneID:13316498 GeneID:885086
GeneID:923951 KEGG:mtc:MT1753 KEGG:mtu:Rv1713 KEGG:mtv:RVBD_1713
PATRIC:18125608 TubercuList:Rv1713 OMA:NCFLVIN ProtClustDB:PRK03003
Uniprot:P64057
Length = 463
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 149/453 (32%), Positives = 230/453 (50%)
Query: 191 VVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLAT 250
VV P V + + R G E ++ D GV ++ + D A+ T G + T
Sbjct: 31 VVGRPNVGKSTLVNRIL-GRREAVVQDIPGV-----TRDRVCYD-ALWT--GRRFVVQDT 81
Query: 251 R--EAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIIL 308
E + ++ QA+ A+ + +I +VD G TAADE A L ++ K + L
Sbjct: 82 GGWEPNAKGLQRLVAEQASVAMRTADAVILVVDAGVGATAADEAAARILLRS--GKPVFL 139
Query: 309 AVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEGTEDLVEE 367
A NK +S KG + WSLG P ISA+ G G +LLD V + L +V +
Sbjct: 140 AANKVDS-EKGESDAAALWSLGLGEPHAISAMHGRGVADLLDGVLAALPEVGESASASGG 198
Query: 368 ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDT 427
R+ A+VG+PNVGKSS+LN L G+ R++V +GTT D +D+ G +R +DT
Sbjct: 199 PRRV---ALVGKPNVGKSSLLNKLAGDQRSVVHEAAGTTVDPVDS-LIELGGDVWRFVDT 254
Query: 428 AGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGK 487
AG+R++ AS G A SV R AI ++V ++I+A +TEQD R+ + + G+
Sbjct: 255 AGLRRKVGQAS-GHEFYA-SV-RTHAAIDSAEVAIVLIDASQPLTEQDLRVISMVIEAGR 311
Query: 488 GCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMV 547
++ NKWD + ++ ++++ +L + WA V +A G++V K++ A E
Sbjct: 312 ALVLAYNKWDLVDEDRRELL---QREIDRELVQVRWAQRVNISAKTGRAVHKLVPAMEDA 368
Query: 548 DKERSRRLSTATINQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLF 607
R++T +N + E A +PP + + TQA RPPTFV F F
Sbjct: 369 LASWDTRIATGPLNTWLTEVTA-ATPPPVRGGKQPRILFATQATARPPTFVLFTTG---F 424
Query: 608 PET-YRRYMEKQLRADAGFSGTPIRLLWRSRRK 639
E YRR++E++LR GF G+PIR+ R R K
Sbjct: 425 LEAGYRRFLERRLRETFGFDGSPIRVNVRVREK 457
Score = 172 (65.6 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 47/147 (31%), Positives = 74/147 (50%)
Query: 365 VEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI--DTEFTGPEGQKF 422
+ E P +A+VGRPNVGKS+++N ++G +V I G TRD + D +TG ++F
Sbjct: 20 IAESGAAPVVAVVGRPNVGKSTLVNRILGRREAVVQDIPGVTRDRVCYDALWTG---RRF 76
Query: 423 RLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERI 482
+ DT G A G + L +A A+R +D V LV++A T D A +
Sbjct: 77 VVQDTGGWEPNA----KG--LQRLVAEQASVAMRTADAVILVVDAGVGATAADEAAARIL 130
Query: 483 EQEGKGCLIVVNKWDTIPNKNQQTATY 509
+ GK + NK D+ ++ A +
Sbjct: 131 LRSGKPVFLAANKVDSEKGESDAAALW 157
Score = 169 (64.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 46/128 (35%), Positives = 70/128 (54%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W F++ DTGG
Sbjct: 27 PVVAVVGRPNVGKSTLVNRILGRREAVVQDIPGVTRDRVCYDALWTGRRFVVQDTGGWEP 86
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+K ++ + A + + T +A + + + + ATAA +E+ I L G+
Sbjct: 87 NAKGLQRLVAEQA--------SVAMRTADAVILVVDAGVG--ATAA-DEAAARILLRSGK 135
Query: 284 AGLTAADE 291
AA++
Sbjct: 136 PVFLAANK 143
>UNIPROTKB|P0A6P5 [details] [associations]
symbol:der "50S ribosomal subunit stability factor"
species:83333 "Escherichia coli K-12" [GO:0005829 "cytosol"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0032794 "GTPase
activating protein binding" evidence=IPI] [GO:0043022 "ribosome
binding" evidence=IDA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IMP] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003924 GO:GO:0043022 GO:GO:0000027
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR HOGENOM:HOG000242862 PIR:F65027 RefSeq:NP_417006.2
RefSeq:YP_490739.1 ProteinModelPortal:P0A6P5 SMR:P0A6P5
DIP:DIP-48272N IntAct:P0A6P5 PaxDb:P0A6P5 PRIDE:P0A6P5
EnsemblBacteria:EBESCT00000000698 EnsemblBacteria:EBESCT00000017218
GeneID:12934159 GeneID:946983 KEGG:ecj:Y75_p2464 KEGG:eco:b2511
PATRIC:32120415 EchoBASE:EB3959 EcoGene:EG14207
BioCyc:EcoCyc:G7319-MONOMER BioCyc:ECOL316407:JW5403-MONOMER
BioCyc:MetaCyc:G7319-MONOMER Genevestigator:P0A6P5 Uniprot:P0A6P5
Length = 490
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 144/491 (29%), Positives = 235/491 (47%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YGR+ EF+ +DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
M + ++ I + L +A MP+ + + FLV
Sbjct: 61 DGTEDGVETRMAEQSLLA-IEEADVVLFMVDARAGLMPA--DEAIAKHLRSREKPTFLVA 117
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISG 341
+ D+ + D+ + + I A S +G++ + E L +
Sbjct: 118 NKTDGLDPDQAVVDFYSLGLGEIYPIAA-----SHGRGVLSLLEHVLLPWMEDLAPQEEV 172
Query: 342 TGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
E +E E ED + ++ +AIVGRPNVGKS++ N ++GE+R +V
Sbjct: 173 DEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYD 232
Query: 402 ISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVV 461
+ GTTRD+I +G+++ LIDTAG+RKR I + E SV + +AI ++VV
Sbjct: 233 MPGTTRDSIYIPMER-DGREYVLIDTAGVRKRGKITDA---VEKFSVIKTLQAIEDANVV 288
Query: 462 ALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
LVI+A I++QD + I G+ +IVVNKWD + +Q+ ++ + +L +
Sbjct: 289 MLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGL---SQEVKEQVKETLDFRLGFI 345
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPXXXXXXX 581
D+A + + +A+ G V + + +RR+ T+ + +++ AV PP
Sbjct: 346 DFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRV 405
Query: 582 XXVYYCTQAAVRPPTFVFFVNDAKLFPETYRRYMEKQLRADAGFSGTPIRLLWRSRRKME 641
+ Y PP V N K P++Y+RY+ R G+PIR+ ++
Sbjct: 406 K-LKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRIQFKEGENPY 464
Query: 642 MKEGKSASRTQ 652
+ + + TQ
Sbjct: 465 ANKRNTLTPTQ 475
Score = 158 (60.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 35/83 (42%), Positives = 50/83 (60%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P+ L ++AIVGRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT
Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDT 257
Query: 219 GGVLNVSKSQPNIMEDLAITTTI 241
GV K + +E ++ T+
Sbjct: 258 AGVRKRGKIT-DAVEKFSVIKTL 279
>UNIPROTKB|Q9KTW7 [details] [associations]
symbol:der "GTPase Der" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:B82284 RefSeq:NP_230412.1 ProteinModelPortal:Q9KTW7
DNASU:2615306 GeneID:2615306 KEGG:vch:VC0763 PATRIC:20080637
OMA:TNVLNEV Uniprot:Q9KTW7
Length = 494
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 151/504 (29%), Positives = 255/504 (50%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 ------LNVSKSQPNIME----DLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIE 271
+ +Q ++ D+ + G G+ +A + A+A+ IE+ A +
Sbjct: 61 DGSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVA--DEAIAQHLRRIEKPAILVVN 118
Query: 272 ESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF 331
+ VDG AD A++ + MD+ +A + +G+ + + L
Sbjct: 119 K-------VDG----IDADAASAEFWQLG-MDQMYQIAA----AHGRGVGALIDR-VLN- 160
Query: 332 SPLPISAISGTGTGELLDLVCSE---LKKVEGTEDLVEEENR----IPA-IAIVGRPNVG 383
P + + +L DL E +++E +E+ E E + +P +AI+GRPNVG
Sbjct: 161 ---PFAEQMESEQAQLEDLTNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVG 217
Query: 384 KSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTT 443
KS++ N ++GE+R +V + GTTRD+I E +++ LIDTAG+R+R I T
Sbjct: 218 KSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDE-REYVLIDTAGVRRRKRI---NETV 273
Query: 444 EALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKN 503
E SV + +AI ++VV LV++A I++QD + G+ +I VNKWD + +
Sbjct: 274 EKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVNKWDGL---S 330
Query: 504 QQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQV 563
+ ++++ +L +D+A I + +A+ G V + + + + + R+ T+ + ++
Sbjct: 331 FDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRI 390
Query: 564 VQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLFPETYRRYMEKQLRADA 623
++ A PP + Y PP V N P++Y+RY+ R
Sbjct: 391 MKMATDDHQPPMVRGRRVK-LKYAHAGGYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSL 449
Query: 624 GFSGTPIRLLWR-SRRKMEMKEGK 646
GTPIR+ ++ S E K K
Sbjct: 450 EIMGTPIRIQFQNSENPFEGKTNK 473
>TIGR_CMR|VC_0763 [details] [associations]
symbol:VC_0763 "GTP-binding protein" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:B82284 RefSeq:NP_230412.1 ProteinModelPortal:Q9KTW7
DNASU:2615306 GeneID:2615306 KEGG:vch:VC0763 PATRIC:20080637
OMA:TNVLNEV Uniprot:Q9KTW7
Length = 494
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 151/504 (29%), Positives = 255/504 (50%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 ------LNVSKSQPNIME----DLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIE 271
+ +Q ++ D+ + G G+ +A + A+A+ IE+ A +
Sbjct: 61 DGSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVA--DEAIAQHLRRIEKPAILVVN 118
Query: 272 ESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF 331
+ VDG AD A++ + MD+ +A + +G+ + + L
Sbjct: 119 K-------VDG----IDADAASAEFWQLG-MDQMYQIAA----AHGRGVGALIDR-VLN- 160
Query: 332 SPLPISAISGTGTGELLDLVCSE---LKKVEGTEDLVEEENR----IPA-IAIVGRPNVG 383
P + + +L DL E +++E +E+ E E + +P +AI+GRPNVG
Sbjct: 161 ---PFAEQMESEQAQLEDLTNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVG 217
Query: 384 KSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTT 443
KS++ N ++GE+R +V + GTTRD+I E +++ LIDTAG+R+R I T
Sbjct: 218 KSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDE-REYVLIDTAGVRRRKRI---NETV 273
Query: 444 EALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKN 503
E SV + +AI ++VV LV++A I++QD + G+ +I VNKWD + +
Sbjct: 274 EKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVNKWDGL---S 330
Query: 504 QQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQV 563
+ ++++ +L +D+A I + +A+ G V + + + + + R+ T+ + ++
Sbjct: 331 FDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRI 390
Query: 564 VQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLFPETYRRYMEKQLRADA 623
++ A PP + Y PP V N P++Y+RY+ R
Sbjct: 391 MKMATDDHQPPMVRGRRVK-LKYAHAGGYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSL 449
Query: 624 GFSGTPIRLLWR-SRRKMEMKEGK 646
GTPIR+ ++ S E K K
Sbjct: 450 EIMGTPIRIQFQNSENPFEGKTNK 473
>UNIPROTKB|Q2GDM7 [details] [associations]
symbol:NSE_0536 "GTPase Der" species:222891 "Neorickettsia
sennetsu str. Miyayama" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0042254 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HOGENOM:HOG000242862 OMA:TNVLNEV RefSeq:YP_506419.1
ProteinModelPortal:Q2GDM7 STRING:Q2GDM7 GeneID:3931630
KEGG:nse:NSE_0536 PATRIC:22681121
BioCyc:NSEN222891:GHFU-555-MONOMER Uniprot:Q2GDM7
Length = 473
Score = 373 (136.4 bits), Expect = 7.7e-45, Sum P(2) = 7.7e-45
Identities = 121/410 (29%), Positives = 192/410 (46%)
Query: 259 PSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
P +ER AI+ES +++F++D + + + D A+WLR+N + I+L NK S RK
Sbjct: 68 PETVER-TEYAIKESDMVLFVIDNK--IDSEDMLFANWLRRNAGNSKIVLVCNK--SDRK 122
Query: 319 GIMQVSEFWSLGFSPL-PISAISGTGTGELLDLVCSEL-KKVEGTEDLVEEENRIPAIAI 376
S F GF + ISA G EL+ + S + ++++ ++ EE+ RI +AI
Sbjct: 123 DRDDCSLF---GFQNVFLISAEHSLGLRELISYIESFIPEQLDTPKNGSEEQRRIK-VAI 178
Query: 377 VGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAI 436
+G+PNVGKSS++N VG+DR +V PI+GTTRD I E + F L+DTAG+RK+ +
Sbjct: 179 LGQPNVGKSSLMNKFVGKDRVLVLPIAGTTRDPISDELQW-KCTTFELVDTAGLRKKQRV 237
Query: 437 ASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITE-QDCRIAERIEQEGKGCLIVVNK 495
E + +RA R SDVV + + E QD + RI ++GK ++V NK
Sbjct: 238 TDG---LEKICNSRALRTSAESDVVIFMCDISNFTLERQDFLLMNRILEQGKPMILVGNK 294
Query: 496 WDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRL 555
D + + + +KL A PI + + + I+ + + R +
Sbjct: 295 KDAVDAIELENIKDFISLQAQKLIASQ-IPIFFISCLHEGDFSYILDECRRLHDDSKRNI 353
Query: 556 STATINQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLFPETYRRYM 615
ST +N +QE V P Y + + FV N +L E+Y Y+
Sbjct: 354 STHRLNMWLQEIVRRHPHPMVNSKAVKLKYI--KKLLNKFVFVLSANRPELVAESYLNYV 411
Query: 616 EKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASRTQANLVPRDRKVASS 665
L D G P+ L + + E K + L+ R + S
Sbjct: 412 RNSLIRDFRICGIPVTLTLKKNTNPYV-ESKPPEQKNMELISRRGSASGS 460
Score = 128 (50.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+VAI+G+PNVGKS+L N+ VG +R +V+ G TRD + W F LVDT G+
Sbjct: 175 KVAILGQPNVGKSSLMNKFVGKDRVLVLPIAGTTRDPISDELQWKCTTFELVDTAGL 231
Score = 127 (49.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 39/126 (30%), Positives = 62/126 (49%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
++IVG+ NVGKS++ N + E R+I G TRD + + +G+ L+DTAG +
Sbjct: 7 VSIVGKANVGKSTLFNKMAKEKRSITMDRKGVTRDVVVRRISLSDGKSLLLLDTAGFNPQ 66
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQE-GKGCLIV 492
+V R AI+ SD+V VI+ I +D A + + G +++
Sbjct: 67 ----------HPETVERTEYAIKESDMVLFVIDNK--IDSEDMLFANWLRRNAGNSKIVL 114
Query: 493 V-NKWD 497
V NK D
Sbjct: 115 VCNKSD 120
Score = 120 (47.3 bits), Expect = 7.7e-45, Sum P(2) = 7.7e-45
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGG 220
RV+IVG+ NVGKS LFN++ R+I +D GVTRD + R S +L+DT G
Sbjct: 6 RVSIVGKANVGKSTLFNKMAKEKRSITMDRKGVTRDVVVRRISLSDGKSLLLLDTAG 62
>TIGR_CMR|NSE_0536 [details] [associations]
symbol:NSE_0536 "putative GTP-binding protein EngA"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0005525
"GTP binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0042254 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HOGENOM:HOG000242862 OMA:TNVLNEV RefSeq:YP_506419.1
ProteinModelPortal:Q2GDM7 STRING:Q2GDM7 GeneID:3931630
KEGG:nse:NSE_0536 PATRIC:22681121
BioCyc:NSEN222891:GHFU-555-MONOMER Uniprot:Q2GDM7
Length = 473
Score = 373 (136.4 bits), Expect = 7.7e-45, Sum P(2) = 7.7e-45
Identities = 121/410 (29%), Positives = 192/410 (46%)
Query: 259 PSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
P +ER AI+ES +++F++D + + + D A+WLR+N + I+L NK S RK
Sbjct: 68 PETVER-TEYAIKESDMVLFVIDNK--IDSEDMLFANWLRRNAGNSKIVLVCNK--SDRK 122
Query: 319 GIMQVSEFWSLGFSPL-PISAISGTGTGELLDLVCSEL-KKVEGTEDLVEEENRIPAIAI 376
S F GF + ISA G EL+ + S + ++++ ++ EE+ RI +AI
Sbjct: 123 DRDDCSLF---GFQNVFLISAEHSLGLRELISYIESFIPEQLDTPKNGSEEQRRIK-VAI 178
Query: 377 VGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAI 436
+G+PNVGKSS++N VG+DR +V PI+GTTRD I E + F L+DTAG+RK+ +
Sbjct: 179 LGQPNVGKSSLMNKFVGKDRVLVLPIAGTTRDPISDELQW-KCTTFELVDTAGLRKKQRV 237
Query: 437 ASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITE-QDCRIAERIEQEGKGCLIVVNK 495
E + +RA R SDVV + + E QD + RI ++GK ++V NK
Sbjct: 238 TDG---LEKICNSRALRTSAESDVVIFMCDISNFTLERQDFLLMNRILEQGKPMILVGNK 294
Query: 496 WDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRL 555
D + + + +KL A PI + + + I+ + + R +
Sbjct: 295 KDAVDAIELENIKDFISLQAQKLIASQ-IPIFFISCLHEGDFSYILDECRRLHDDSKRNI 353
Query: 556 STATINQVVQEAVAFKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLFPETYRRYM 615
ST +N +QE V P Y + + FV N +L E+Y Y+
Sbjct: 354 STHRLNMWLQEIVRRHPHPMVNSKAVKLKYI--KKLLNKFVFVLSANRPELVAESYLNYV 411
Query: 616 EKQLRADAGFSGTPIRLLWRSRRKMEMKEGKSASRTQANLVPRDRKVASS 665
L D G P+ L + + E K + L+ R + S
Sbjct: 412 RNSLIRDFRICGIPVTLTLKKNTNPYV-ESKPPEQKNMELISRRGSASGS 460
Score = 128 (50.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+VAI+G+PNVGKS+L N+ VG +R +V+ G TRD + W F LVDT G+
Sbjct: 175 KVAILGQPNVGKSSLMNKFVGKDRVLVLPIAGTTRDPISDELQWKCTTFELVDTAGL 231
Score = 127 (49.8 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 39/126 (30%), Positives = 62/126 (49%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
++IVG+ NVGKS++ N + E R+I G TRD + + +G+ L+DTAG +
Sbjct: 7 VSIVGKANVGKSTLFNKMAKEKRSITMDRKGVTRDVVVRRISLSDGKSLLLLDTAGFNPQ 66
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQE-GKGCLIV 492
+V R AI+ SD+V VI+ I +D A + + G +++
Sbjct: 67 ----------HPETVERTEYAIKESDMVLFVIDNK--IDSEDMLFANWLRRNAGNSKIVL 114
Query: 493 V-NKWD 497
V NK D
Sbjct: 115 VCNKSD 120
Score = 120 (47.3 bits), Expect = 7.7e-45, Sum P(2) = 7.7e-45
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGG 220
RV+IVG+ NVGKS LFN++ R+I +D GVTRD + R S +L+DT G
Sbjct: 6 RVSIVGKANVGKSTLFNKMAKEKRSITMDRKGVTRDVVVRRISLSDGKSLLLLDTAG 62
>UNIPROTKB|Q8EC36 [details] [associations]
symbol:der "GTPase Der" species:211586 "Shewanella
oneidensis MR-1" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_718862.1 ProteinModelPortal:Q8EC36
GeneID:1170993 KEGG:son:SO_3308 PATRIC:23526292 Uniprot:Q8EC36
Length = 487
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 131/465 (28%), Positives = 221/465 (47%)
Query: 191 VVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIME--DLAITTTIGMEGIPL 248
+V P V + ++ R + ++ D G+ K + + + T G++G
Sbjct: 7 LVGRPNVGKSTLFNR-LTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGIDG--- 62
Query: 249 ATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIIL 308
T E +M Q+ AAIEE+ V++F+ D +AGLTAAD IA LR F++
Sbjct: 63 -TEEGIETKMAE----QSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVV- 116
Query: 309 AVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGTGELLDLVCSELKKVEG------- 360
NK + +EFWSLG + ++A G G +++ + + G
Sbjct: 117 -ANKIDGIDAD-SACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALTPYAEAMGIERQGEE 174
Query: 361 --------TEDLVEEENR----IPA-IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTR 407
TE+ E E + +P +AI+G+PNVGKS++ N ++GE+R +V GTTR
Sbjct: 175 EEVDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTR 234
Query: 408 DAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEA 467
D+I +G+++ +IDTAG+R+R+ + E SV + +A+ ++VV L+I+A
Sbjct: 235 DSIYIPMER-DGREYVIIDTAGVRRRSKVHE---VIEKFSVIKTLKAVEDANVVLLIIDA 290
Query: 468 MACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIV 527
+ EQD + G+ +I VNKWD I +Q + ++ +L +D+A I
Sbjct: 291 REGVAEQDLGLLGFALNAGRALVIAVNKWDGI---DQGIKDRVKSELDRRLGFIDFARIH 347
Query: 528 YSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPXXXXXXXXXVYYC 587
+ +A+ G V + + E +RR+ST+ + +++Q + PP + Y
Sbjct: 348 FISALHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVK-LKYA 406
Query: 588 TQAAVRPPTFVFFVNDAKLFPETYRRYMEKQLRADAGFSGTPIRL 632
PP V N P++Y+RYM R GTPI+L
Sbjct: 407 HAGGYNPPIVVIHGNQVSKLPDSYKRYMMNYFRRSLKVVGTPIQL 451
Score = 387 (141.3 bits), Expect = 8.4e-36, P = 8.4e-36
Identities = 108/343 (31%), Positives = 177/343 (51%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YGR+F +EF++VDTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLAT-REAAVARMPSMIERQATAAIEESCVIIFLV 280
+ M + ++ + + T A + I + + + + V+ +
Sbjct: 61 DGTEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANKI 120
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAIS 340
DG AD A++ + + + A +G+ + E+ ++ I
Sbjct: 121 DG----IDADSACAEFWSLGLGEVYQMAAAQG-----RGVTNMIEYALTPYAEA--MGIE 169
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRI---PA-IAIVGRPNVGKSSILNALVGEDR 396
G E +D E + E E+ E+ R+ P +AI+G+PNVGKS++ N ++GE+R
Sbjct: 170 RQGEEEEVD----ERQYTE--EEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEER 223
Query: 397 TIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIR 456
+V GTTRD+I +G+++ +IDTAG+R+R+ + E SV + +A+
Sbjct: 224 VVVYDEPGTTRDSIYIPMER-DGREYVIIDTAGVRRRSKVHE---VIEKFSVIKTLKAVE 279
Query: 457 RSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTI 499
++VV L+I+A + EQD + G+ +I VNKWD I
Sbjct: 280 DANVVLLIIDAREGVAEQDLGLLGFALNAGRALVIAVNKWDGI 322
>TIGR_CMR|SO_3308 [details] [associations]
symbol:SO_3308 "GTP-binding protein EngA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR HOGENOM:HOG000242862 RefSeq:NP_718862.1
ProteinModelPortal:Q8EC36 GeneID:1170993 KEGG:son:SO_3308
PATRIC:23526292 Uniprot:Q8EC36
Length = 487
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 131/465 (28%), Positives = 221/465 (47%)
Query: 191 VVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIME--DLAITTTIGMEGIPL 248
+V P V + ++ R + ++ D G+ K + + + T G++G
Sbjct: 7 LVGRPNVGKSTLFNR-LTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGIDG--- 62
Query: 249 ATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIIL 308
T E +M Q+ AAIEE+ V++F+ D +AGLTAAD IA LR F++
Sbjct: 63 -TEEGIETKMAE----QSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVV- 116
Query: 309 AVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGTGELLDLVCSELKKVEG------- 360
NK + +EFWSLG + ++A G G +++ + + G
Sbjct: 117 -ANKIDGIDAD-SACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALTPYAEAMGIERQGEE 174
Query: 361 --------TEDLVEEENR----IPA-IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTR 407
TE+ E E + +P +AI+G+PNVGKS++ N ++GE+R +V GTTR
Sbjct: 175 EEVDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTR 234
Query: 408 DAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEA 467
D+I +G+++ +IDTAG+R+R+ + E SV + +A+ ++VV L+I+A
Sbjct: 235 DSIYIPMER-DGREYVIIDTAGVRRRSKVHE---VIEKFSVIKTLKAVEDANVVLLIIDA 290
Query: 468 MACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIV 527
+ EQD + G+ +I VNKWD I +Q + ++ +L +D+A I
Sbjct: 291 REGVAEQDLGLLGFALNAGRALVIAVNKWDGI---DQGIKDRVKSELDRRLGFIDFARIH 347
Query: 528 YSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPXXXXXXXXXVYYC 587
+ +A+ G V + + E +RR+ST+ + +++Q + PP + Y
Sbjct: 348 FISALHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVK-LKYA 406
Query: 588 TQAAVRPPTFVFFVNDAKLFPETYRRYMEKQLRADAGFSGTPIRL 632
PP V N P++Y+RYM R GTPI+L
Sbjct: 407 HAGGYNPPIVVIHGNQVSKLPDSYKRYMMNYFRRSLKVVGTPIQL 451
Score = 387 (141.3 bits), Expect = 8.4e-36, P = 8.4e-36
Identities = 108/343 (31%), Positives = 177/343 (51%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YGR+F +EF++VDTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLAT-REAAVARMPSMIERQATAAIEESCVIIFLV 280
+ M + ++ + + T A + I + + + + V+ +
Sbjct: 61 DGTEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANKI 120
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAIS 340
DG AD A++ + + + A +G+ + E+ ++ I
Sbjct: 121 DG----IDADSACAEFWSLGLGEVYQMAAAQG-----RGVTNMIEYALTPYAEA--MGIE 169
Query: 341 GTGTGELLDLVCSELKKVEGTEDLVEEENRI---PA-IAIVGRPNVGKSSILNALVGEDR 396
G E +D E + E E+ E+ R+ P +AI+G+PNVGKS++ N ++GE+R
Sbjct: 170 RQGEEEEVD----ERQYTE--EEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEER 223
Query: 397 TIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIR 456
+V GTTRD+I +G+++ +IDTAG+R+R+ + E SV + +A+
Sbjct: 224 VVVYDEPGTTRDSIYIPMER-DGREYVIIDTAGVRRRSKVHE---VIEKFSVIKTLKAVE 279
Query: 457 RSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTI 499
++VV L+I+A + EQD + G+ +I VNKWD I
Sbjct: 280 DANVVLLIIDAREGVAEQDLGLLGFALNAGRALVIAVNKWDGI 322
>DICTYBASE|DDB_G0279259 [details] [associations]
symbol:DDB_G0279259 "putative GTP-binding protein"
species:44689 "Dictyostelium discoideum" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PRINTS:PR00326
dictyBase:DDB_G0279259 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AAFI02000030 eggNOG:COG1160 KO:K03977 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
RefSeq:XP_641756.1 ProteinModelPortal:Q54X21 STRING:Q54X21
EnsemblProtists:DDB0205682 GeneID:8621954 KEGG:ddi:DDB_G0279259
InParanoid:Q54X21 Uniprot:Q54X21
Length = 841
Score = 438 (159.2 bits), Expect = 2.1e-40, P = 2.1e-40
Identities = 139/414 (33%), Positives = 224/414 (54%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AI+G+PNVGKS +FNR++ G R +V+E T Y +GE G L
Sbjct: 153 PVIAIIGKPNVGKSTIFNRIIEGQRRALVEEIPGTTRDRY----YGE---------GFLY 199
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ I+ D T G+ G ++ + +I+ QA A+EE+ I+F++D +
Sbjct: 200 ---GREFILVD-----TGGLIGESKEDKD----QFQGVIQDQAEIAMEEADAILFVLDYK 247
Query: 284 AGLTAADEEIADWLR--KNYMDKFIILAVNKCES-PRKG--IMQV-SEFWSLGFS-PLPI 336
+GLT+ D+E+A LR + + K I + VNK ++ +G ++ ++ LGF P+P
Sbjct: 248 SGLTSIDKELARMLRSKRQKLGKPIYIGVNKADNVSMRGEDFEEMKTQITRLGFGEPIPF 307
Query: 337 SAISGTGTGELLDLVCSELKKVEGTEDLVEEENRI-PA-IAIVGRPNVGKSSILNALVGE 394
SA G + +L+ S+ ++ + + +EE+ + P I+IVG+PN GKSS+LN ++ E
Sbjct: 308 SAHHGDNVHSMFELILSQFPHMDLSLEKLEEDLKPGPIRISIVGQPNAGKSSLLNKIIEE 367
Query: 395 DRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRA 454
+R+IVS I GTT D +D F + + LIDTAGIR+R+ G E SV A +A
Sbjct: 368 ERSIVSDIPGTTHDPVDCNFLWRDTHELSLIDTAGIRRRST-HKIG--LEKSSVLWALKA 424
Query: 455 IRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDT-IPNKNQQTATYYEQD 513
I +S VV +VI+A ITEQD +IA + + K +I+VNKWD + NK+ AT Q
Sbjct: 425 IEKSHVVFIVIDATIGITEQDLKIASFVVENRKSMIIIVNKWDLYLKNKH---AT---QK 478
Query: 514 VREKLRALDW---APIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVV 564
+ +KL D+ + S +IA ++ D ++D S + + + V+
Sbjct: 479 ITDKLFFHDFQNKSSSSSSKSIANENFDTSFTLDTLLDDLISNNIKNSKTDDVL 532
Score = 157 (60.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 42/140 (30%), Positives = 71/140 (50%)
Query: 510 YEQDVREKLRALDWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVA 569
YE ++R KL LD+API++++A G V + + + ER ++L A + ++++ V+
Sbjct: 693 YETELRSKLSFLDFAPILFTSAKTGFCVPTAVDLSIKIFFEREKKLRVAELIEIIK-LVS 751
Query: 570 FKSPPXXXXXXXXXVYYCTQAAVRPPTFVFFVNDAKLFPETYRRYMEKQLRADAGFSGTP 629
FK + + QA PPTFVF+VN + R++ + +R F GTP
Sbjct: 752 FKHKFPKMGRNTLKLKFAQQARGYPPTFVFWVNHPDNVEPSVVRFLLRSIRDYYPFVGTP 811
Query: 630 IRLLWRSRRKMEMKEGKSAS 649
I + +R R + K K S
Sbjct: 812 IYVQFRKNRANKKKFYKKVS 831
>TIGR_CMR|CJE_0435 [details] [associations]
symbol:CJE_0435 "GTPase family protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0042254 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_178454.1 HSSP:Q9X1F8
ProteinModelPortal:Q5HW81 STRING:Q5HW81 GeneID:3231197
KEGG:cjr:CJE0435 PATRIC:20042570 OMA:YLENTYR
BioCyc:CJEJ195099:GJC0-440-MONOMER Uniprot:Q5HW81
Length = 460
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 140/483 (28%), Positives = 237/483 (49%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+ ++G+PNVGKS+LFNR+ AI D G TRD + + ML+D+GG+
Sbjct: 4 IILIGKPNVGKSSLFNRMARQRIAITSDISGTTRDTNKTQIHIHSKKAMLIDSGGLDESD 63
Query: 226 KSQPNIMEDLAITTTIGMEG-IPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ N+ ++ T + E I L + +A P +RQ ++++ I LV +
Sbjct: 64 ELFKNVKKN---TLKVAKESDIILYLVDGKLA--PDDEDRQFFYSLKKLGKPIALVINKV 118
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGT 344
DEE A W N+ K I N + G+ ++ E W F L +
Sbjct: 119 D-NKKDEERA-WEFANFGVKEIF---NLSVTHNVGLDELYE-WLEKF--LHEEFLIPDEE 170
Query: 345 GELLDLVCSELKKVEGTEDLVEE--ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPI 402
L D + E + EG E +E +N I + IVGR NVGKSS+LNALV ++R++VS I
Sbjct: 171 ENLEDFL--EYYE-EGKEFQFKEVDQNHI-RVGIVGRVNVGKSSLLNALVKQERSVVSSI 226
Query: 403 SGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVA 462
+GTT D ++ E + + +DTAGIRKR I E ++NR + + S +
Sbjct: 227 AGTTIDPVN-ESVVHKDKVIEFVDTAGIRKRGKIQG----LERFALNRTEKILSHSQIAL 281
Query: 463 LVIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVR-EKLRAL 521
LV++A E D RIA + + G +IV+NKWD K++ +++R ++ + L
Sbjct: 282 LVLDAHEGFNELDERIAGLVAKHYLGVIIVLNKWD----KSEMDFDKTVKELRLDRFKFL 337
Query: 522 DWAPIVYSTAIAGQSVDKIIVAAEMVDKERSRRLSTATINQVVQEAVAFKSPPXXXXXXX 581
+AP++ +A++G+ V ++ + + ++++ T+ +N +++ A P
Sbjct: 338 AYAPVISVSALSGKRVHVLLDKILQIFENFTQKIQTSKLNTLIENATRAHPLPHDYGKLV 397
Query: 582 XXVYYCTQAAVRPPTFVFFVNDAKLFPETYRRYMEKQLRADAGFSGTPIRLLWRSRRKME 641
+YY Q + PP +N K +Y+RY++ Q+R + F G P+ + R + E
Sbjct: 398 K-IYYAVQYDLAPPKIALIMNRPKALHFSYKRYLQNQIRKEFNFEGVPLVIASRKKGSKE 456
Query: 642 MKE 644
E
Sbjct: 457 NDE 459
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 38/135 (28%), Positives = 70/135 (51%)
Query: 373 AIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRK 432
+I ++G+PNVGKSS+ N + + I S ISGTTRD T+ +K LID+ G+ +
Sbjct: 3 SIILIGKPNVGKSSLFNRMARQRIAITSDISGTTRDTNKTQIH-IHSKKAMLIDSGGLDE 61
Query: 433 RAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIV 492
S + + N + + SD++ +++ ++D + +++ GK +V
Sbjct: 62 ------SDELFKNVKKN-TLKVAKESDIILYLVDGKLAPDDEDRQFFYSLKKLGKPIALV 114
Query: 493 VNKWDTIPNKNQQTA 507
+NK D K+++ A
Sbjct: 115 INKVDN--KKDEERA 127
>TAIR|locus:2029406 [details] [associations]
symbol:AT1G78010 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA;ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006897 "endocytosis" evidence=RCA]
HAMAP:MF_00379 InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0007264 GO:GO:0003924 GO:GO:0005622
GO:GO:0006400 eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
HOGENOM:HOG000200713 OMA:IDFPEEV EMBL:BT015351 EMBL:BT015722
IPI:IPI00546429 RefSeq:NP_177924.3 UniGene:At.21626
ProteinModelPortal:Q66GQ1 SMR:Q66GQ1 STRING:Q66GQ1 PaxDb:Q66GQ1
PRIDE:Q66GQ1 EnsemblPlants:AT1G78010.1 GeneID:844136
KEGG:ath:AT1G78010 TAIR:At1g78010 InParanoid:Q66GQ1
PhylomeDB:Q66GQ1 ProtClustDB:CLSN2680810 Genevestigator:Q66GQ1
Uniprot:Q66GQ1
Length = 560
Score = 230 (86.0 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 61/197 (30%), Positives = 107/197 (54%)
Query: 347 LLDLVCSELKKVEGTEDLVEEENRIPA---IAIVGRPNVGKSSILNALVGEDRTIVSPIS 403
+++ + S + VE D + + + IAIVGRPNVGKSS+LNA +R IV+ ++
Sbjct: 290 VINKITSMSQDVESALDTANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEVA 349
Query: 404 GTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVAL 463
GTTRD ++ T G L+DTAGIR+ + E + V R+ A + +DV+ +
Sbjct: 350 GTTRDVVEANVT-VRGVPITLLDTAGIRE------TNDIVEKIGVERSETAAKVADVIIM 402
Query: 464 VIEAMACITEQDCRIAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRALDW 523
+ A+ TE+D + +I+ + K ++V+NK D P + +D R+K
Sbjct: 403 AVSAVEGWTEEDTELLRKIQSD-KPMILVMNKIDCAPPGSCDQL----EDQRKKEEVFHK 457
Query: 524 APIVYSTAIAGQSVDKI 540
+ V+++A+ GQ ++++
Sbjct: 458 S--VFTSAVTGQGIEEL 472
>TIGR_CMR|BA_5734 [details] [associations]
symbol:BA_5734 "tRNA modification GTPase TrmE"
species:198094 "Bacillus anthracis str. Ames" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 ProtClustDB:PRK05291
RefSeq:NP_847879.1 RefSeq:YP_031574.1 RefSeq:YP_052661.1
ProteinModelPortal:Q81JD9 DNASU:1085503
EnsemblBacteria:EBBACT00000010687 EnsemblBacteria:EBBACT00000014942
EnsemblBacteria:EBBACT00000021840 GeneID:1085503 GeneID:2820766
GeneID:2848296 KEGG:ban:BA_5734 KEGG:bar:GBAA_5734 KEGG:bat:BAS5337
HOGENOM:HOG000200713 OMA:IDFPEEV
BioCyc:BANT260799:GJAJ-5414-MONOMER
BioCyc:BANT261594:GJ7F-5590-MONOMER Uniprot:Q81JD9
Length = 458
Score = 219 (82.2 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 50/125 (40%), Positives = 77/125 (61%)
Query: 373 AIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRK 432
A AI+GRPNVGKSS+LN+LV E + IV+ I+GTTRD I+ E+ G +LIDTAGIR+
Sbjct: 222 ATAIIGRPNVGKSSLLNSLVQEKKAIVTDIAGTTRDVIE-EYVNVRGVPLKLIDTAGIRE 280
Query: 433 RAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIV 492
+ E + V R+ + ++D+V +V+ +T +D + ++ GK +++
Sbjct: 281 TEDVV------ERIGVERSKEMMSQADLVLVVVNYSETLTNEDEELFRAVQ--GKDFIVI 332
Query: 493 VNKWD 497
VNK D
Sbjct: 333 VNKTD 337
>TIGR_CMR|CJE_1036 [details] [associations]
symbol:CJE_1036 "tRNA modification GTPase TrmE"
species:195099 "Campylobacter jejuni RM1221" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
HOGENOM:HOG000200713 RefSeq:YP_179032.1 ProteinModelPortal:Q5HUK3
STRING:Q5HUK3 GeneID:3231546 KEGG:cjr:CJE1036 PATRIC:20043873
BioCyc:CJEJ195099:GJC0-1063-MONOMER Uniprot:Q5HUK3
Length = 442
Score = 201 (75.8 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 67/213 (31%), Positives = 107/213 (50%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFT-GPEGQKFRLIDTAGIRK 432
IAIVG+PNVGKSS+LNAL+ +R IVS I+GTTRD I+ F G R+IDTAGIR+
Sbjct: 217 IAIVGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEESFKLGTH--LLRIIDTAGIRE 274
Query: 433 RAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIV 492
S E + V + +++ +D++ V +A ++D +I + + K +
Sbjct: 275 ------SKDVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWI 328
Query: 493 VNKWD------TIPNKN------QQTATYYEQDVREKLRALDWAPIVYSTAI---AGQSV 537
+NK D NKN Q+ T +++++ L + D I+ S+ A +
Sbjct: 329 LNKSDLENVFKNTQNKNFIKLSAQKDITLLKEELQNYLNSFDSEGIMVSSLDLINACKIS 388
Query: 538 DKIIVAAEMVDKERSRRLSTATINQVVQEAVAF 570
+ I A+ + +E S L +N + E F
Sbjct: 389 SEAIFRAKGLLEESSLELFAFELNLAINELARF 421
Score = 131 (51.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVG+PNVGKS+L N L+ RAIV D G TRD + G H ++DT G+
Sbjct: 216 KIAIVGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGI--- 272
Query: 225 SKSQPNIMEDLAI 237
+ +++E + +
Sbjct: 273 -RESKDVIEQIGV 284
>UNIPROTKB|P75104 [details] [associations]
symbol:mnmE "tRNA modification GTPase MnmE" species:272634
"Mycoplasma pneumoniae M129" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00379 InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264
GO:GO:0046872 GO:GO:0003924 GO:GO:0006400 EMBL:U00089
GenomeReviews:U00089_GR eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
ProtClustDB:PRK05291 OMA:IDFPEEV PIR:S73472 RefSeq:NP_109696.1
ProteinModelPortal:P75104 IntAct:P75104 GeneID:877349
KEGG:mpn:MPN008 PATRIC:20021289 BioCyc:MPNE272634:GJ6Z-8-MONOMER
Uniprot:P75104
Length = 442
Score = 197 (74.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 48/142 (33%), Positives = 82/142 (57%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
IAI+G NVGKSS+LNAL+ +D+ IVS I G+TRD ++ +F G +++DTAGIR+
Sbjct: 220 IAIIGNTNVGKSSLLNALLDQDKAIVSAIKGSTRDIVEGDFA-LNGHFVKILDTAGIRQH 278
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVV 493
S E + + F AI+ +++V +++A E D +I R+++ K +V
Sbjct: 279 Q------SALEKAGIQKTFGAIKTANLVIYLLDARQ--PEPDPKIIARLKKLKKDFFLVH 330
Query: 494 NKWDTIPNKNQQTATYYEQDVR 515
NK D + Q + + ++ ++
Sbjct: 331 NKADLVQQSFQVSISAKQKQIQ 352
>TIGR_CMR|CHY_0006 [details] [associations]
symbol:CHY_0006 "tRNA modification GTPase TrmE"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0006400 "tRNA
modification" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 HSSP:Q9WYA4
OMA:PGEFSEQ HOGENOM:HOG000200713 RefSeq:YP_358878.1
ProteinModelPortal:Q3AG56 STRING:Q3AG56 GeneID:3727714
KEGG:chy:CHY_0006 PATRIC:21273213 BioCyc:CHYD246194:GJCN-6-MONOMER
Uniprot:Q3AG56
Length = 461
Score = 193 (73.0 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 49/132 (37%), Positives = 76/132 (57%)
Query: 371 IPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGI 430
I A+ I G+PNVGKSS+LNAL+ + R IV+ I GTTRD I+ ++ +G +++DTAGI
Sbjct: 223 ITAV-IAGKPNVGKSSLLNALLRKKRAIVTDIPGTTRDVIE-DYLNLKGIPVKIVDTAGI 280
Query: 431 RKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCL 490
R+ + E L V + + ++DV V++ I E D +I I ++ L
Sbjct: 281 RETEDLV------EKLGVEKTREYLNQADVTLFVVDVSIGIDEDDEKILSLINKDKS--L 332
Query: 491 IVVNKWDTIPNK 502
+V+NK D + K
Sbjct: 333 LVINKIDLLQGK 344
>TIGR_CMR|CPS_4121 [details] [associations]
symbol:CPS_4121 "GTP-binding protein Era" species:167879
"Colwellia psychrerythraea 34H" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 eggNOG:COG1159 KO:K03595 TIGRFAMs:TIGR00436
OMA:KVAKDWQ HOGENOM:HOG000245597 RefSeq:YP_270776.1
ProteinModelPortal:Q47WP6 SMR:Q47WP6 STRING:Q47WP6 GeneID:3521211
KEGG:cps:CPS_4121 PATRIC:21471105
BioCyc:CPSY167879:GI48-4134-MONOMER Uniprot:Q47WP6
Length = 305
Score = 186 (70.5 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 58/168 (34%), Positives = 87/168 (51%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
IAIVGRPNVGKS++LNAL+G+ +I S TTR I T E ++ L+DT G+
Sbjct: 13 IAIVGRPNVGKSTLLNALLGQKISITSKKPQTTRHRILGILT-EENRQAVLVDTPGLHTE 71
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVV 493
A + A S +I +++ ++E T+ D + +++Q G C++VV
Sbjct: 72 EKRAINRLMNRAAS-----SSIAEVELIMFLVEGTHW-TKDDELVLSKVKQSGTPCILVV 125
Query: 494 NKWDTIPNKNQQTATYYEQDVREKLRAL-DWAPIVYSTAIAGQSVDKI 540
NK D IP+K++ +KL A+ D+ IV A G VD I
Sbjct: 126 NKTDNIPDKDELLPHL------QKLGAMHDFRDIVPICATKGHGVDTI 167
Score = 121 (47.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS L N L+G +I +P TR R+ G + +LVDT G+
Sbjct: 13 IAIVGRPNVGKSTLLNALLGQKISITSKKPQTTRHRILGILTEENRQAVLVDTPGLHTEE 72
Query: 226 KSQPNIMEDLAITTTI 241
K N + + A +++I
Sbjct: 73 KRAINRLMNRAASSSI 88
Score = 63 (27.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 261 MIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES-PRKG 319
++ R A+++I E +I+FLV+G T DE + ++++ IL VNK ++ P K
Sbjct: 79 LMNRAASSSIAEVELIMFLVEG-THWTKDDELVLSKVKQSGTP--CILVVNKTDNIPDKD 135
Query: 320 IMQVSEFWSLG----FSPL-PISAISGTGTGELLDLVCSELKKVEGT----ED-LVEEEN 369
+ + LG F + PI A G G + L + L EG ED + + +
Sbjct: 136 EL-LPHLQKLGAMHDFRDIVPICATKGHGVDTIRQLCLTSLP--EGVFWFPEDHITDRSS 192
Query: 370 RIPAIAIV 377
R A I+
Sbjct: 193 RFMASEII 200
>TIGR_CMR|GSU_3465 [details] [associations]
symbol:GSU_3465 "tRNA modification GTPase TrmE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
HOGENOM:HOG000200713 RefSeq:NP_954505.1 ProteinModelPortal:Q746Q3
GeneID:2686588 KEGG:gsu:GSU3465 PATRIC:22029787
BioCyc:GSUL243231:GH27-3432-MONOMER Uniprot:Q746Q3
Length = 456
Score = 190 (71.9 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 53/132 (40%), Positives = 69/132 (52%)
Query: 373 AIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRK 432
A+ I G+PNVGKSS+LN L+ E R IV+ + GTTRD I+ E G R+IDTAGIR
Sbjct: 222 AVLIAGKPNVGKSSLLNTLLQEKRAIVTSVPGTTRDIIE-EVVNIRGLPLRMIDTAGIRD 280
Query: 433 RAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIV 492
I E V I +D+V LVI+ + E D I + GK ++V
Sbjct: 281 TEDIV------EKEGVRLTLEKIPEADLVLLVIDGSRPLDEDDRMILSALA--GKRLILV 332
Query: 493 VNKWDTIPNKNQ 504
NK D +P Q
Sbjct: 333 ENKCD-LPRAVQ 343
>UNIPROTKB|Q8EH80 [details] [associations]
symbol:era "GTPase Era" species:211586 "Shewanella
oneidensis MR-1" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20 InterPro:IPR015946
HSSP:Q9X1F8 SUPFAM:SSF54814 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 OMA:KVAKDWQ HOGENOM:HOG000245597
RefSeq:NP_716969.1 ProteinModelPortal:Q8EH80 GeneID:1169170
KEGG:son:SO_1349 PATRIC:23522352 Uniprot:Q8EH80
Length = 339
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 58/178 (32%), Positives = 91/178 (51%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFT-GPEGQKFRLIDTAGIRK 432
+AI+GRPNVGKS++LN L+G+ +I S TTR I T GP F IDT G+
Sbjct: 48 VAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIVF--IDTPGLH- 104
Query: 433 RAAIASSGSTTEALSVNRAFRAIRRSDV--VALVIEAMACITEQDCRIAERIEQEG--KG 488
I + + NRA A +DV V V++ M T D + ++ + G +
Sbjct: 105 ---IEEQRAINRLM--NRA-AASSLADVSMVIFVVDGMTW-TADDEMVLSKLRRGGEERK 157
Query: 489 CLIVVNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKII-VAAE 545
++ +NK D I K+++ Y +DV +K + PI +A G +V +I+ +AA+
Sbjct: 158 TVLAINKVDNI--KDKEALFPYLEDVAKKYPFDEILPI---SASKGTNVKRILELAAQ 210
Score = 124 (48.7 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
VAI+GRPNVGKS L NRL+G +I +P TR R+ G G + + +DT G+
Sbjct: 48 VAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIVFIDTPGL 103
Score = 102 (41.0 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 51/204 (25%), Positives = 87/204 (42%)
Query: 261 MIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES--PRK 318
++ R A +++ + ++IF+VDG TA DE + LR+ ++ +LA+NK ++ ++
Sbjct: 114 LMNRAAASSLADVSMVIFVVDGMTW-TADDEMVLSKLRRGGEERKTVLAINKVDNIKDKE 172
Query: 319 GIMQVSEFWSLGF---SPLPISAISGTGTGELLDLVCSELKKVEG--TEDLVEEEN-RIP 372
+ E + + LPISA GT +L+L L + ED V + + R
Sbjct: 173 ALFPYLEDVAKKYPFDEILPISASKGTNVKRILELAAQSLPENPFFFPEDYVTDRSQRFM 232
Query: 373 AIAIVGRPNVGKSSILNALVGEDRTI-VSPISGTTRDAIDTE---FTGPEGQKFRLIDTA 428
A IV R + + L + D T+ + EGQK +I +
Sbjct: 233 ASEIV-REKLMR--FLGDELPYDATVEIEQFKMMENGVYQINALILVEREGQKRMVIGSK 289
Query: 429 GIRKRAAIASSGSTTEALSVNRAF 452
G R R + E L N+ F
Sbjct: 290 GERIRTIATQARLDMETLFDNKVF 313
>TIGR_CMR|SO_1349 [details] [associations]
symbol:SO_1349 "GTP-binding protein Era" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0003924 GO:GO:0006184
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0042274 GO:GO:0070181
Gene3D:3.30.300.20 InterPro:IPR015946 HSSP:Q9X1F8 SUPFAM:SSF54814
KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
HOGENOM:HOG000245597 RefSeq:NP_716969.1 ProteinModelPortal:Q8EH80
GeneID:1169170 KEGG:son:SO_1349 PATRIC:23522352 Uniprot:Q8EH80
Length = 339
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 58/178 (32%), Positives = 91/178 (51%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFT-GPEGQKFRLIDTAGIRK 432
+AI+GRPNVGKS++LN L+G+ +I S TTR I T GP F IDT G+
Sbjct: 48 VAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIVF--IDTPGLH- 104
Query: 433 RAAIASSGSTTEALSVNRAFRAIRRSDV--VALVIEAMACITEQDCRIAERIEQEG--KG 488
I + + NRA A +DV V V++ M T D + ++ + G +
Sbjct: 105 ---IEEQRAINRLM--NRA-AASSLADVSMVIFVVDGMTW-TADDEMVLSKLRRGGEERK 157
Query: 489 CLIVVNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKII-VAAE 545
++ +NK D I K+++ Y +DV +K + PI +A G +V +I+ +AA+
Sbjct: 158 TVLAINKVDNI--KDKEALFPYLEDVAKKYPFDEILPI---SASKGTNVKRILELAAQ 210
Score = 124 (48.7 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
VAI+GRPNVGKS L NRL+G +I +P TR R+ G G + + +DT G+
Sbjct: 48 VAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIVFIDTPGL 103
Score = 102 (41.0 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 51/204 (25%), Positives = 87/204 (42%)
Query: 261 MIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES--PRK 318
++ R A +++ + ++IF+VDG TA DE + LR+ ++ +LA+NK ++ ++
Sbjct: 114 LMNRAAASSLADVSMVIFVVDGMTW-TADDEMVLSKLRRGGEERKTVLAINKVDNIKDKE 172
Query: 319 GIMQVSEFWSLGF---SPLPISAISGTGTGELLDLVCSELKKVEG--TEDLVEEEN-RIP 372
+ E + + LPISA GT +L+L L + ED V + + R
Sbjct: 173 ALFPYLEDVAKKYPFDEILPISASKGTNVKRILELAAQSLPENPFFFPEDYVTDRSQRFM 232
Query: 373 AIAIVGRPNVGKSSILNALVGEDRTI-VSPISGTTRDAIDTE---FTGPEGQKFRLIDTA 428
A IV R + + L + D T+ + EGQK +I +
Sbjct: 233 ASEIV-REKLMR--FLGDELPYDATVEIEQFKMMENGVYQINALILVEREGQKRMVIGSK 289
Query: 429 GIRKRAAIASSGSTTEALSVNRAF 452
G R R + E L N+ F
Sbjct: 290 GERIRTIATQARLDMETLFDNKVF 313
>SGD|S000004625 [details] [associations]
symbol:MSS1 "Mitochondrial protein" species:4932
"Saccharomyces cerevisiae" [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0070899
"mitochondrial tRNA wobble uridine modification" evidence=IMP]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
SGD:S000004625 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0005743 GO:GO:0003924 EMBL:BK006946 EMBL:Z49211
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:IRISGTH GeneTree:ENSGT00390000016851 OrthoDB:EOG4B2X62
EMBL:X69481 EMBL:DQ834923 PIR:S54025 RefSeq:NP_013736.1
ProteinModelPortal:P32559 SMR:P32559 DIP:DIP-5882N IntAct:P32559
MINT:MINT-2788166 STRING:P32559 PaxDb:P32559 EnsemblFungi:YMR023C
GeneID:855037 KEGG:sce:YMR023C CYGD:YMR023c NextBio:978251
Genevestigator:P32559 GermOnline:YMR023C GO:GO:0070899
Uniprot:P32559
Length = 526
Score = 182 (69.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 54/156 (34%), Positives = 87/156 (55%)
Query: 347 LLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTT 406
L D + + ++KVE + L +N I + ++G PNVGKSS++N+L +D +IVS I GTT
Sbjct: 254 LRDQIVTFMQKVEKSTIL---QNGIKLV-LLGAPNVGKSSLVNSLTNDDISIVSDIPGTT 309
Query: 407 RDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIE 466
RD+ID G K + DTAGIR++ S E L ++RA + +SD+ +++
Sbjct: 310 RDSIDA-MINVNGYKVIICDTAGIREK-----SSDKIEMLGIDRAKKKSVQSDLCLFIVD 363
Query: 467 A--MACITEQDCRIAERIEQEG-KGCLIVVNKWDTI 499
++ + +D + G K +IVVNK D +
Sbjct: 364 PTDLSKLLPEDILAHLSSKTFGNKRIIIVVNKSDLV 399
>CGD|CAL0004408 [details] [associations]
symbol:orf19.2042 species:5476 "Candida albicans" [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:1900524 "positive
regulation of flocculation via cell wall protein-carbohydrate
interaction by positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0070899 "mitochondrial
tRNA wobble uridine modification" evidence=IEA] HAMAP:MF_00379
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 CGD:CAL0004408 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0005622 GO:GO:0006400 EMBL:AACQ01000031
EMBL:AACQ01000030 eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
RefSeq:XP_719491.1 RefSeq:XP_719616.1 ProteinModelPortal:Q5AD25
STRING:Q5AD25 GeneID:3638773 GeneID:3638809 KEGG:cal:CaO19.2042
KEGG:cal:CaO19.9590 Uniprot:Q5AD25
Length = 529
Score = 180 (68.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 53/161 (32%), Positives = 87/161 (54%)
Query: 355 LKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEF 414
L KV+ ++ L+ N I +A++G PN GKSSILN L +D IVS I+GTTRD +D
Sbjct: 267 LSKVKSSQILL---NGIQ-LALLGPPNAGKSSILNILANKDAAIVSEIAGTTRDILDIPL 322
Query: 415 TGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQ 474
G K + DTAGIR + E + RA + +D V +V++ M+ + ++
Sbjct: 323 E-IGGYKVVVGDTAGIRS----FEEADSIEQEGIKRAKQRSMLADFVIVVLDPMS-VEKE 376
Query: 475 DCRIAERIE---QEGKGCLIVVNKWDTIPNKNQQTATYYEQ 512
+ E ++ + K LIV+NK D +++++ + Y +
Sbjct: 377 PLELKEHLKTLVKANKQMLIVLNKQDLFASRSEEMISNYSR 417
>WB|WBGene00009557 [details] [associations]
symbol:F39B2.7 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006400 "tRNA
modification" evidence=IEA] [GO:0015093 "ferrous iron transmembrane
transporter activity" evidence=IEA] [GO:0015684 "ferrous iron
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0005622 GO:GO:0006400
HSSP:P25522 eggNOG:COG0486 HOGENOM:HOG000200714 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ GeneTree:ENSGT00390000016851 EMBL:Z92834 PIR:T21994
RefSeq:NP_493573.1 ProteinModelPortal:Q9XTZ1 SMR:Q9XTZ1
IntAct:Q9XTZ1 STRING:Q9XTZ1 PaxDb:Q9XTZ1 EnsemblMetazoa:F39B2.7.1
EnsemblMetazoa:F39B2.7.2 GeneID:3564835 KEGG:cel:CELE_F39B2.7
UCSC:F39B2.7 CTD:3564835 WormBase:F39B2.7 InParanoid:Q9XTZ1
NextBio:954161 Uniprot:Q9XTZ1
Length = 439
Score = 179 (68.1 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 44/116 (37%), Positives = 66/116 (56%)
Query: 351 VCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI 410
+ EL ++ D E R I + GRPN GKSSILN L +D IVS I GTTRD++
Sbjct: 190 ILHELNRMIKAWDGAERAQRGLDIVLYGRPNSGKSSILNQLAHDDVAIVSSIPGTTRDSL 249
Query: 411 DTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIE 466
+T G + RL DTAG+R++ + EA + RA + I+ +D++ +V++
Sbjct: 250 ET-IIQINGVRCRLTDTAGVRQK-----TNDVIEAEGIRRAQKRIQSADIICVVVD 299
Score = 38 (18.4 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 105 DFGIDVDALEREAKDAVREYSSLLSRQL 132
DFG V+ REA+ V E L+R +
Sbjct: 171 DFGEHVNLELREAQQDVSEILHELNRMI 198
Score = 38 (18.4 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 168 IVGRPNVGKSALFNRLVGGNRAIVVDEPGVT-RDRMYGRSFWGEH 211
I R ++A F ++ GG RAI + + + +++ +GEH
Sbjct: 131 IKSRTEKERNAAFGQMRGGVRAIEIRKQLIQILSKLFVIIDFGEH 175
>TIGR_CMR|CBU_1922 [details] [associations]
symbol:CBU_1922 "tRNA modification GTPase TrmE"
species:227377 "Coxiella burnetii RSA 493" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] [GO:0009636 "response to toxic substance"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0003924
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006400
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ ProtClustDB:PRK05291 EMBL:Y10436 RefSeq:NP_820899.1
ProteinModelPortal:P94612 GeneID:1209835 KEGG:cbu:CBU_1922
PATRIC:17932577 BioCyc:CBUR227377:GJ7S-1896-MONOMER Uniprot:P94612
Length = 452
Score = 174 (66.3 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 58/195 (29%), Positives = 96/195 (49%)
Query: 328 SLGFSPLPISAISGTGTGELLDLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSI 387
S+ F I ++ E L+ + +++++E T + I G PNVGKSS+
Sbjct: 173 SIDFPEEEIDFLADERIKETLENLTHQVQEIEKTAKQGALLREGITVVIAGEPNVGKSSL 232
Query: 388 LNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALS 447
LN L G++ IV+ I+GTTRD I E +G ++DTAG+R + E
Sbjct: 233 LNLLSGQETAIVTDIAGTTRDII-RESIHIDGLPIHVVDTAGLRLTEDVV------EKEG 285
Query: 448 VNRAFRAIRRSDVVALVIEAMACITEQDCRIAERI-EQEGK-GCLIVVNKWDTI---PNK 502
V R +A++++D++ L+I+A + IA+ E + K LIV NK D I P K
Sbjct: 286 VRRTQKAVQQADLLLLMIDASKPTEDFKKIIAQWFSENDNKIPTLIVENKIDLIGEAPRK 345
Query: 503 NQQTATYYEQDVREK 517
+ + + V+ +
Sbjct: 346 ENKEYPHIKLSVKTR 360
>TIGR_CMR|CPS_5049 [details] [associations]
symbol:CPS_5049 "tRNA modification GTPase TrmE"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
HSSP:Q9WYA4 OMA:PGEFSEQ ProtClustDB:PRK05291 RefSeq:YP_271687.1
ProteinModelPortal:Q47U36 SMR:Q47U36 STRING:Q47U36 GeneID:3518638
KEGG:cps:CPS_5049 PATRIC:21472877
BioCyc:CPSY167879:GI48-5049-MONOMER Uniprot:Q47U36
Length = 471
Score = 173 (66.0 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 39/94 (41%), Positives = 57/94 (60%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+ I GRPN GKSS+LNAL G+ IV+ I+GTTRD + E +G +IDTAG+R
Sbjct: 226 VVIAGRPNAGKSSLLNALSGKQTAIVTDIAGTTRDVL-AEQIHIDGMPLHIIDTAGLR-- 282
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEA 467
S E + + RA++ I ++D V L+++A
Sbjct: 283 ----DSDDVVEKIGIERAWQEINQADRVLLMVDA 312
>UNIPROTKB|Q9KVY5 [details] [associations]
symbol:mnmE "tRNA modification GTPase MnmE" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009636 "response to toxic
substance" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0009636
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ
ProtClustDB:PRK05291 PIR:D82375 RefSeq:NP_062587.1
ProteinModelPortal:Q9KVY5 SMR:Q9KVY5 DNASU:2614455 GeneID:2614455
KEGG:vch:VC0003 PATRIC:20079054 Uniprot:Q9KVY5
Length = 453
Score = 172 (65.6 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 45/128 (35%), Positives = 70/128 (54%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+ I GRPN GKSS+LNAL G++ IV+ I+GTTRD + E +G +IDTAG+R
Sbjct: 218 VVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVL-REHIHIDGMPLHIIDTAGLR-- 274
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMAC-ITE-QDC--RIAERIEQEGKGC 489
+ E + + RA+ IR++D V +++ T+ QD +++ E G
Sbjct: 275 ----DASDAVEKIGIERAWEEIRQADRVLFMVDGTTTEATDPQDIWPDFVDKLP-ENIGI 329
Query: 490 LIVVNKWD 497
++ NK D
Sbjct: 330 TVIRNKAD 337
>TIGR_CMR|VC_0003 [details] [associations]
symbol:VC_0003 "thiophene and furan oxidation protein ThdF"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009636 "response to toxic
substance" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0009636
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ
ProtClustDB:PRK05291 PIR:D82375 RefSeq:NP_062587.1
ProteinModelPortal:Q9KVY5 SMR:Q9KVY5 DNASU:2614455 GeneID:2614455
KEGG:vch:VC0003 PATRIC:20079054 Uniprot:Q9KVY5
Length = 453
Score = 172 (65.6 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 45/128 (35%), Positives = 70/128 (54%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+ I GRPN GKSS+LNAL G++ IV+ I+GTTRD + E +G +IDTAG+R
Sbjct: 218 VVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVL-REHIHIDGMPLHIIDTAGLR-- 274
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMAC-ITE-QDC--RIAERIEQEGKGC 489
+ E + + RA+ IR++D V +++ T+ QD +++ E G
Sbjct: 275 ----DASDAVEKIGIERAWEEIRQADRVLFMVDGTTTEATDPQDIWPDFVDKLP-ENIGI 329
Query: 490 LIVVNKWD 497
++ NK D
Sbjct: 330 TVIRNKAD 337
>TIGR_CMR|CHY_0430 [details] [associations]
symbol:CHY_0430 "GTP-binding protein Era" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0042254 GO:GO:0019843 Gene3D:3.30.300.20 InterPro:IPR015946
OMA:ITREQLF SUPFAM:SSF54814 eggNOG:COG1159 HOGENOM:HOG000245596
KO:K03595 TIGRFAMs:TIGR00436 RefSeq:YP_359291.1
ProteinModelPortal:Q3AEZ3 STRING:Q3AEZ3 GeneID:3728261
KEGG:chy:CHY_0430 PATRIC:21274021
BioCyc:CHYD246194:GJCN-431-MONOMER Uniprot:Q3AEZ3
Length = 298
Score = 164 (62.8 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 50/168 (29%), Positives = 85/168 (50%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
++IVGRPNVGKS++LN +VG I+S TTR+ I T +GQ IDT G++K
Sbjct: 8 VSIVGRPNVGKSTLLNQVVGTKIAIMSDKPQTTRNKIRAVLTSEKGQII-FIDTPGVQK- 65
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVV 493
E + + +A ++ DV+ V+EA + I Q+ + + + + ++VV
Sbjct: 66 ----PRNKLGEFM-LKQALTSLDEVDVLLYVVEANSPIGPQENYLLKTLAEVKTPIILVV 120
Query: 494 NKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKII 541
NK D + QT + + +L+ A Y +A+ G V +++
Sbjct: 121 NKIDVVKMIEAQTLA---RQIESRLKV---AKTYYISALNGTGVSELV 162
Score = 118 (46.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS L N++VG AI+ D+P TR+++ + + + +DT GV
Sbjct: 8 VSIVGRPNVGKSTLLNQVVGTKIAIMSDKPQTTRNKIRAVLTSEKGQIIFIDTPGVQKPR 67
Query: 226 KSQPNIMEDLAITT 239
M A+T+
Sbjct: 68 NKLGEFMLKQALTS 81
Score = 54 (24.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 21/90 (23%), Positives = 45/90 (50%)
Query: 264 RQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPR----KG 319
+QA +++E V++++V+ + + + + L + + IIL VNK + + +
Sbjct: 76 KQALTSLDEVDVLLYVVEANSPIGPQENYLLKTLAE--VKTPIILVVNKIDVVKMIEAQT 133
Query: 320 IMQVSEFWSLGFSPLPISAISGTGTGELLD 349
+ + E ISA++GTG EL++
Sbjct: 134 LARQIESRLKVAKTYYISALNGTGVSELVE 163
>TIGR_CMR|SO_0003 [details] [associations]
symbol:SO_0003 "tRNA modification GTPase TrmE"
species:211586 "Shewanella oneidensis MR-1" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0008175 "tRNA methyltransferase
activity" evidence=ISS] [GO:0009636 "response to toxic substance"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
ProtClustDB:PRK05291 RefSeq:NP_715645.2 ProteinModelPortal:Q8CX52
GeneID:1167901 KEGG:son:SO_0003 PATRIC:23519697 Uniprot:Q8CX52
Length = 453
Score = 168 (64.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 37/93 (39%), Positives = 55/93 (59%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+ I GRPN GKSS+LNAL G++ IV+ I+GTTRD + E +G +IDTAG+R
Sbjct: 218 VVIAGRPNAGKSSLLNALAGKESAIVTEIAGTTRDVL-REHIHLDGMPLHIIDTAGLR-- 274
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIE 466
+ T E + + RA+ I +D V +++
Sbjct: 275 ----DTTDTVEQIGIERAWNEINSADRVLFMVD 303
>UNIPROTKB|P25522 [details] [associations]
symbol:mnmE "GTP-binding protein with a role in
modification of tRNA" species:83333 "Escherichia coli K-12"
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009268 "response to pH" evidence=IMP] [GO:0030488 "tRNA
methylation" evidence=IMP] [GO:0003924 "GTPase activity"
evidence=IEA;IDA] [GO:0005525 "GTP binding" evidence=IEA;IDA]
[GO:0006805 "xenobiotic metabolic process" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] HAMAP:MF_00379
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0016020 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0003924 GO:GO:0009268
GO:GO:0006805 EMBL:L10328 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
EMBL:S57109 PIR:A38160 PIR:C65173 RefSeq:NP_418162.1
RefSeq:YP_491728.1 PDB:1RFL PDB:2GJ8 PDB:2GJ9 PDB:2GJA PDBsum:1RFL
PDBsum:2GJ8 PDBsum:2GJ9 PDBsum:2GJA ProteinModelPortal:P25522
SMR:P25522 DIP:DIP-11033N IntAct:P25522 PRIDE:P25522
EnsemblBacteria:EBESCT00000002643 EnsemblBacteria:EBESCT00000017912
GeneID:12932528 GeneID:948222 KEGG:ecj:Y75_p3466 KEGG:eco:b3706
PATRIC:32122909 EchoBASE:EB0990 EcoGene:EG10997
BioCyc:EcoCyc:EG10997-MONOMER BioCyc:ECOL316407:JW3684-MONOMER
EvolutionaryTrace:P25522 Genevestigator:P25522 GO:GO:0030488
Uniprot:P25522
Length = 454
Score = 167 (63.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 36/93 (38%), Positives = 56/93 (60%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+ I GRPN GKSS+LNAL G + IV+ I+GTTRD + E +G +IDTAG+R+
Sbjct: 219 VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVL-REHIHIDGMPLHIIDTAGLRE- 276
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIE 466
+ E + + RA++ I ++D V +++
Sbjct: 277 -----ASDEVERIGIERAWQEIEQADRVLFMVD 304
>UNIPROTKB|Q74AX3 [details] [associations]
symbol:era "GTPase Era" species:243231 "Geobacter
sulfurreducens PCA" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR003593 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326
PROSITE:PS50823 SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0003924 GO:GO:0006184
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0042274 GO:GO:0070181
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 KO:K03595
ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
HOGENOM:HOG000245597 RefSeq:NP_953275.1 ProteinModelPortal:Q74AX3
GeneID:2687595 KEGG:gsu:GSU2226 PATRIC:22027307
BioCyc:GSUL243231:GH27-2182-MONOMER Uniprot:Q74AX3
Length = 299
Score = 162 (62.1 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 53/169 (31%), Positives = 84/169 (49%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
++I+GRPNVGKS++LN ++GE I S TTR+ I P G + IDT GI
Sbjct: 12 VSIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNLP-GAQIVFIDTPGIHHA 70
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVV 493
+ + EALS +IR D+V L++EA +Q+ IA + +VV
Sbjct: 71 RSRLNKFMVEEALS------SIREVDLVMLLVEANRAPGDQEREIAGLLPSVNVPVFLVV 124
Query: 494 NKWDTI-PNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKII 541
NK D I P+ + T Y + + +V +A G++V++++
Sbjct: 125 NKIDLIDPDILAERLTAYAE-------LFPFREVVPVSAETGENVERLV 166
Score = 136 (52.9 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 39/125 (31%), Positives = 62/125 (49%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+I+GRPNVGKS L NR++G I D+P TR+R+ G + + +DT G+ +
Sbjct: 12 VSIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNLPGAQIVFIDTPGIHHAR 71
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
M + A+++ ++ + L EA R P ER+ + V +FLV +
Sbjct: 72 SRLNKFMVEEALSSIREVDLVMLLV-EAN--RAPGDQEREIAGLLPSVNVPVFLVVNKID 128
Query: 286 LTAAD 290
L D
Sbjct: 129 LIDPD 133
Score = 38 (18.4 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 514 VREKLRALDWAPIVYSTAI 532
VREK+ L I YSTA+
Sbjct: 198 VREKVFRLTRDEIPYSTAV 216
>TIGR_CMR|GSU_2226 [details] [associations]
symbol:GSU_2226 "GTP-binding protein Era" species:243231
"Geobacter sulfurreducens PCA" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR003593 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326
PROSITE:PS50823 SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0003924 GO:GO:0006184
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0042274 GO:GO:0070181
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 KO:K03595
ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
HOGENOM:HOG000245597 RefSeq:NP_953275.1 ProteinModelPortal:Q74AX3
GeneID:2687595 KEGG:gsu:GSU2226 PATRIC:22027307
BioCyc:GSUL243231:GH27-2182-MONOMER Uniprot:Q74AX3
Length = 299
Score = 162 (62.1 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 53/169 (31%), Positives = 84/169 (49%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
++I+GRPNVGKS++LN ++GE I S TTR+ I P G + IDT GI
Sbjct: 12 VSIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNLP-GAQIVFIDTPGIHHA 70
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVV 493
+ + EALS +IR D+V L++EA +Q+ IA + +VV
Sbjct: 71 RSRLNKFMVEEALS------SIREVDLVMLLVEANRAPGDQEREIAGLLPSVNVPVFLVV 124
Query: 494 NKWDTI-PNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKII 541
NK D I P+ + T Y + + +V +A G++V++++
Sbjct: 125 NKIDLIDPDILAERLTAYAE-------LFPFREVVPVSAETGENVERLV 166
Score = 136 (52.9 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 39/125 (31%), Positives = 62/125 (49%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+I+GRPNVGKS L NR++G I D+P TR+R+ G + + +DT G+ +
Sbjct: 12 VSIIGRPNVGKSTLLNRILGEKIVITSDKPQTTRNRIQGIHNLPGAQIVFIDTPGIHHAR 71
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
M + A+++ ++ + L EA R P ER+ + V +FLV +
Sbjct: 72 SRLNKFMVEEALSSIREVDLVMLLV-EAN--RAPGDQEREIAGLLPSVNVPVFLVVNKID 128
Query: 286 LTAAD 290
L D
Sbjct: 129 LIDPD 133
Score = 38 (18.4 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 514 VREKLRALDWAPIVYSTAI 532
VREK+ L I YSTA+
Sbjct: 198 VREKVFRLTRDEIPYSTAV 216
>UNIPROTKB|Q8EAH6 [details] [associations]
symbol:hydF "Fe hydrogenase maturation GTPase HydF"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AE014299 GenomeReviews:AE014299_GR HSSP:P25522
HOGENOM:HOG000287473 OMA:ILPQVQT InterPro:IPR023873
TIGRFAMs:TIGR03918 RefSeq:NP_719457.1 ProteinModelPortal:Q8EAH6
DNASU:1171565 GeneID:1171565 KEGG:son:SO_3926 PATRIC:23527532
ProtClustDB:CLSK2756122 Uniprot:Q8EAH6
Length = 394
Score = 165 (63.1 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 55/170 (32%), Positives = 82/170 (48%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFT-GPEGQKFRLIDTAGIRK 432
IA+VGR N GKSS+LN L G+ +IVS I GTT DA+ + P G DTAGI
Sbjct: 5 IALVGRRNSGKSSLLNMLAGQQISIVSDIKGTTTDAVAKAYELQPLGP-VTFYDTAGI-- 61
Query: 433 RAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIV 492
T A+ V+ R + RSD+ LV++ + D + + I Q L+V
Sbjct: 62 -----DDEGTLGAMRVSATRRVLFRSDMALLVVDEQG-LCPSDMALIDEIRQLQMPILMV 115
Query: 493 VNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIV 542
NK D K + A Q +L + + +T +AG+ + +++V
Sbjct: 116 FNKADICTPKAEDIAFCQNQ-------SLPFIVVSAATGLAGKQLKQLMV 158
>TIGR_CMR|SO_3926 [details] [associations]
symbol:SO_3926 "GTP-binding protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS]
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014299 GenomeReviews:AE014299_GR
HSSP:P25522 HOGENOM:HOG000287473 OMA:ILPQVQT InterPro:IPR023873
TIGRFAMs:TIGR03918 RefSeq:NP_719457.1 ProteinModelPortal:Q8EAH6
DNASU:1171565 GeneID:1171565 KEGG:son:SO_3926 PATRIC:23527532
ProtClustDB:CLSK2756122 Uniprot:Q8EAH6
Length = 394
Score = 165 (63.1 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 55/170 (32%), Positives = 82/170 (48%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFT-GPEGQKFRLIDTAGIRK 432
IA+VGR N GKSS+LN L G+ +IVS I GTT DA+ + P G DTAGI
Sbjct: 5 IALVGRRNSGKSSLLNMLAGQQISIVSDIKGTTTDAVAKAYELQPLGP-VTFYDTAGI-- 61
Query: 433 RAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIV 492
T A+ V+ R + RSD+ LV++ + D + + I Q L+V
Sbjct: 62 -----DDEGTLGAMRVSATRRVLFRSDMALLVVDEQG-LCPSDMALIDEIRQLQMPILMV 115
Query: 493 VNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKIIV 542
NK D K + A Q +L + + +T +AG+ + +++V
Sbjct: 116 FNKADICTPKAEDIAFCQNQ-------SLPFIVVSAATGLAGKQLKQLMV 158
>ASPGD|ASPL0000007078 [details] [associations]
symbol:AN6522 species:162425 "Emericella nidulans"
[GO:0070899 "mitochondrial tRNA wobble uridine modification"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] HAMAP:MF_00379
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0046872
GO:GO:0003924 GO:GO:0005622 EMBL:BN001301 EMBL:AACD01000109
GO:GO:0006400 eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
OrthoDB:EOG4B2X62 RefSeq:XP_664126.1 ProteinModelPortal:Q5AYV8
STRING:Q5AYV8 EnsemblFungi:CADANIAT00007294 GeneID:2870683
KEGG:ani:AN6522.2 OMA:FSEDQHF Uniprot:Q5AYV8
Length = 614
Score = 166 (63.5 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 51/164 (31%), Positives = 75/164 (45%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+A++G PN GKSS+LN +VG + IVS GTTRD +D G +L D AGIR
Sbjct: 293 VALLGAPNAGKSSLLNRIVGREAAIVSTEEGTTRDIVDVGID-LGGWYCKLGDMAGIRSE 351
Query: 434 AAIASSGSTT------EALSVNRAFRAIRRSDVVALVIEA---------MACITEQDC-R 477
+ S G + E + RA SDVV +VI E D
Sbjct: 352 PSSNSPGGASLVIGSVEKEGIRRARARAMASDVVVVVISVEEGSDEGAPFRLAMEPDVVD 411
Query: 478 IAERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQDVREKLRAL 521
A + GK ++ +NK D +P +Q A+ ++ +K+ +
Sbjct: 412 AANECVRAGKQIIVAINKCDRLPPLDQSEASQVPHEIAQKVNQI 455
Score = 120 (47.3 bits), Expect = 0.00077, P = 0.00077
Identities = 48/152 (31%), Positives = 70/152 (46%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM-YGRSFWGEHEFMLVDTGGVLN 223
+VA++G PN GKS+L NR+VG AIV E G TRD + G G + L D G+ +
Sbjct: 292 KVALLGAPNAGKSSLLNRIVGREAAIVSTEEGTTRDIVDVGIDLGGWY-CKLGDMAGIRS 350
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S L I + + EGI R A M S + ++EE +G
Sbjct: 351 EPSSNSPGGASLVIGS-VEKEGI----RRARARAMASDVV-VVVISVEEGSD-----EGA 399
Query: 284 AGLTAADEEIADWLRKNYM-DKFIILAVNKCE 314
A + ++ D + K II+A+NKC+
Sbjct: 400 PFRLAMEPDVVDAANECVRAGKQIIVAINKCD 431
>TIGR_CMR|BA_4524 [details] [associations]
symbol:BA_4524 "GTP-binding protein Era" species:198094
"Bacillus anthracis str. Ames" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003924
GO:GO:0006184 GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20
InterPro:IPR015946 HSSP:Q9X1F8 SUPFAM:SSF54814 HOGENOM:HOG000245596
KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
RefSeq:NP_846747.1 RefSeq:YP_021170.1 RefSeq:YP_030447.1
ProteinModelPortal:Q81LT7 DNASU:1088253
EnsemblBacteria:EBBACT00000009432 EnsemblBacteria:EBBACT00000018443
EnsemblBacteria:EBBACT00000022023 GeneID:1088253 GeneID:2819016
GeneID:2848213 KEGG:ban:BA_4524 KEGG:bar:GBAA_4524 KEGG:bat:BAS4199
BioCyc:BANT260799:GJAJ-4255-MONOMER
BioCyc:BANT261594:GJ7F-4400-MONOMER Uniprot:Q81LT7
Length = 301
Score = 151 (58.2 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 49/168 (29%), Positives = 83/168 (49%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
++I+GRPNVGKS+ LN ++G+ I+S TTR+ I +T + Q IDT GI K
Sbjct: 11 VSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVI-FIDTPGIHKP 69
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVV 493
G V A ++ D+V ++ A+ + I E++++ + +V+
Sbjct: 70 KH--KLGD----FMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQPVFLVI 123
Query: 494 NKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKII 541
NK D + +Q +Q KL D+A IV +A+ G + + +I
Sbjct: 124 NKIDQV--HPEQLLELIDQ--YRKLH--DFAEIVPISALDGNNAEALI 165
Score = 130 (50.8 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+I+GRPNVGKS NR++G AI+ D+P TR+++ G + + + +DT G+
Sbjct: 11 VSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKIQGVYTENDSQVIFIDTPGIHKPK 70
Query: 226 KSQPNIMEDLAITT 239
+ M +A TT
Sbjct: 71 HKLGDFMVKMAQTT 84
Score = 73 (30.8 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 20/99 (20%), Positives = 49/99 (49%)
Query: 257 RMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES- 315
++ + + A ++E +++F+V+ G +E I + L++ F++ +NK +
Sbjct: 72 KLGDFMVKMAQTTLKEVDIVLFMVNAVEGFGRGEEFIIEKLKETKQPVFLV--INKIDQV 129
Query: 316 -PRKGIMQVSEFWSL-GFSPL-PISAISGTGTGELLDLV 351
P + + + ++ L F+ + PISA+ G L+ +
Sbjct: 130 HPEQLLELIDQYRKLHDFAEIVPISALDGNNAEALIGTI 168
>UNIPROTKB|P37214 [details] [associations]
symbol:era "GTPase Era" species:210007 "Streptococcus
mutans UA159" [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0019003 "GDP
binding" evidence=IDA] HAMAP:MF_00367 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0003924 GO:GO:0042254 GO:GO:0019843 GO:GO:0019003
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ EMBL:L03428 EMBL:AE014133 RefSeq:NP_721952.1
ProteinModelPortal:P37214 EnsemblBacteria:EBSTRT00000013881
GeneID:1028847 GenomeReviews:AE014133_GR KEGG:smu:SMU_1617
PATRIC:19665223 SABIO-RK:P37214 Uniprot:P37214
Length = 299
Score = 156 (60.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 51/169 (30%), Positives = 86/169 (50%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRK- 432
+AI+GRPNVGKS+ LN ++G+ I+S + TTR+ I +T + ++ IDT GI K
Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYT-TDKEQIVFIDTPGIHKP 66
Query: 433 RAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIV 492
+ A+ V A+ +R D V ++ A + D I ER++ ++V
Sbjct: 67 KTALGD-------FMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERLKAAKVPVILV 119
Query: 493 VNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKII 541
+NK D + + NQ D R ++ D+ IV +A+ G +V ++
Sbjct: 120 INKIDKV-HPNQLLEQI--DDFRNQM---DFQEIVPISALQGNNVSHLV 162
Score = 116 (45.9 bits), Expect = 0.00065, P = 0.00065
Identities = 37/139 (26%), Positives = 69/139 (49%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPNVGKS N ++G AI+ D+ TR+++ G + + + +DT G+
Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPK 67
Query: 226 KSQPNIMEDLAITTTIGMEGIP-LATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + M + A +T ++ + + + + +MI + AA ++I +D +
Sbjct: 68 TALGDFMVESAYSTLREVDTVLFMVPADEKRGKGDNMIIERLKAAKVPVILVINKID-KV 126
Query: 285 GLTAADEEIADWLRKNYMD 303
E+I D+ +N MD
Sbjct: 127 HPNQLLEQIDDF--RNQMD 143
>TAIR|locus:2154915 [details] [associations]
symbol:AT5G66470 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA] [GO:0045036
"protein targeting to chloroplast" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0003723
Gene3D:3.30.300.20 InterPro:IPR015946 HSSP:Q9X1F8 eggNOG:COG1159
HOGENOM:HOG000245596 KO:K03595 TIGRFAMs:TIGR00436 OMA:KVAKDWQ
EMBL:AY065195 EMBL:AY093245 IPI:IPI00521579 RefSeq:NP_201448.2
UniGene:At.28631 ProteinModelPortal:Q8VZ74 SMR:Q8VZ74 IntAct:Q8VZ74
STRING:Q8VZ74 PaxDb:Q8VZ74 PRIDE:Q8VZ74 EnsemblPlants:AT5G66470.1
GeneID:836779 KEGG:ath:AT5G66470 TAIR:At5g66470 InParanoid:Q8VZ74
PhylomeDB:Q8VZ74 ProtClustDB:CLSN2690267 ArrayExpress:Q8VZ74
Genevestigator:Q8VZ74 Uniprot:Q8VZ74
Length = 427
Score = 136 (52.9 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 155 IGNVPE--HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
+G+ P H VA+VG PNVGKS L N+++G +IV D+P TR R+ G E++
Sbjct: 119 LGHTPNTHHRSGYVAVVGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQ 178
Query: 213 FMLVDTGGVL 222
+L DT GV+
Sbjct: 179 MILYDTPGVI 188
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 45/148 (30%), Positives = 74/148 (50%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+A+VG PNVGKS++ N ++G+ +IV+ TTR I + PE Q L DT G+
Sbjct: 132 VAVVGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMI-LYDTPGV--- 187
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERI-EQEGKG-CLI 491
I + + + A +D V ++++A T + + E + + E K L+
Sbjct: 188 --IEKKMHRLDTMMMKNVRDAAINADCVVILVDACKTPTNIEEVLKEGLGDLEKKPPMLL 245
Query: 492 VVNKWDTI-PNKNQQTATYYEQ--DVRE 516
V+NK D I P + + +YE+ DV E
Sbjct: 246 VMNKKDLIKPGEIAKKLEWYEKFTDVDE 273
Score = 67 (28.6 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 252 EAAVARMPSMIERQAT-AAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAV 310
E + R+ +M+ + AAI CV+I LVD T +E + + L ++L +
Sbjct: 189 EKKMHRLDTMMMKNVRDAAINADCVVI-LVDACKTPTNIEEVLKEGLGDLEKKPPMLLVM 247
Query: 311 NKCESPRKGIMQVSEFWSLGFSP----LPISAISGTGTGELLDLVCSEL 355
NK + + G + W F+ +P+SA G G ++ + + S+L
Sbjct: 248 NKKDLIKPGEIAKKLEWYEKFTDVDEVIPVSAKYGHGIEDVKEWILSKL 296
>TIGR_CMR|SPO_0691 [details] [associations]
symbol:SPO_0691 "GTP-binding protein Era" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0016049 "cell growth" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003924
GO:GO:0006184 GO:GO:0042274 GO:GO:0070181 Gene3D:3.30.300.20
InterPro:IPR015946 OMA:ITREQLF SUPFAM:SSF54814 KO:K03595
ProtClustDB:PRK00089 TIGRFAMs:TIGR00436 HOGENOM:HOG000245597
RefSeq:YP_165946.1 ProteinModelPortal:Q5LVK9 GeneID:3195765
KEGG:sil:SPO0691 PATRIC:23374651 Uniprot:Q5LVK9
Length = 301
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 43/131 (32%), Positives = 67/131 (51%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQ-KFRLIDTAGI-R 431
+A++G PN GKS++LN +VG +IV+ TTR I EG+ + +DT G+ +
Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRTRI--RGVAMEGEAQIVFVDTPGLFQ 65
Query: 432 KRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKG--C 489
R + + V A+ +D+V L+IEA ITE RI E + + KG
Sbjct: 66 PRRRL-------DRAMVAAAWGGAADADIVVLMIEAHRGITEGVERILEGLAEIAKGRTV 118
Query: 490 LIVVNKWDTIP 500
+ +NK D +P
Sbjct: 119 ALAINKIDRVP 129
Score = 122 (48.0 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
VA++G PN GKS L NR+VG +IV + TR R+ G + GE + + VDT G+
Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRTRIRGVAMEGEAQIVFVDTPGL 63
Score = 74 (31.1 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 23/103 (22%), Positives = 48/103 (46%)
Query: 257 RMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES- 315
R+ + A ++ +++ +++ G+T E I + L + + + LA+NK +
Sbjct: 69 RLDRAMVAAAWGGAADADIVVLMIEAHRGITEGVERILEGLAEIAKGRTVALAINKIDRV 128
Query: 316 PRKGIMQVSEFWSLGFS---PLPISAISGTGTGELLDLVCSEL 355
P + ++ +SE + F ISA G G +L + +EL
Sbjct: 129 PAEKLLGLSEALNARFEFARTFMISAERGHGVEDLRKWLAAEL 171
>UNIPROTKB|P06616 [details] [associations]
symbol:era "GTP-binding protein" species:83333 "Escherichia
coli K-12" [GO:0005829 "cytosol" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=IDA] [GO:0070181 "SSU rRNA binding"
evidence=IDA] [GO:0043024 "ribosomal small subunit binding"
evidence=IDA] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA;IDA]
[GO:0005525 "GTP binding" evidence=IEA;IDA] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003924 GO:GO:0006468 EMBL:D64044
EMBL:U36841 GO:GO:0042274 GO:GO:0070181 GO:GO:0043024
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ EMBL:M14658 EMBL:X02673 PIR:S44713 RefSeq:NP_417061.1
RefSeq:YP_490794.1 PDB:1EGA PDB:3IEU PDBsum:1EGA PDBsum:3IEU
ProteinModelPortal:P06616 SMR:P06616 DIP:DIP-9521N IntAct:P06616
MINT:MINT-1248282 PhosSite:P010424 PRIDE:P06616
EnsemblBacteria:EBESCT00000004013 EnsemblBacteria:EBESCT00000004014
EnsemblBacteria:EBESCT00000015240 GeneID:12934226 GeneID:947036
KEGG:ecj:Y75_p2519 KEGG:eco:b2566 PATRIC:32120531 EchoBASE:EB0266
EcoGene:EG10270 HOGENOM:HOG000245597 BioCyc:EcoCyc:EG10270-MONOMER
BioCyc:ECOL316407:JW2550-MONOMER EvolutionaryTrace:P06616
Genevestigator:P06616 Uniprot:P06616
Length = 301
Score = 137 (53.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 55/168 (32%), Positives = 82/168 (48%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
IAIVGRPNVGKS++LN L+G+ +I S + TTR I T Q +DT G+
Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAI-YVDTPGLHME 69
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIV- 492
A + +A S +I ++V V+E T D + ++ +EGK +I+
Sbjct: 70 EKRAINRLMNKAAS-----SSIGDVELVIFVVEGTRW-TPDDEMVLNKL-REGKAPVILA 122
Query: 493 VNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKI 540
VNK D + K + Q + ++ LD PI +A G +VD I
Sbjct: 123 VNKVDNVQEKADLLP--HLQFLASQMNFLDIVPI---SAETGLNVDTI 165
Score = 124 (48.7 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS L N+L+G +I + TR R+ G G ++ + VDT G+
Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 70
Query: 226 KSQPNIMEDLAITTTIG 242
K N + + A +++IG
Sbjct: 71 KRAINRLMNKAASSSIG 87
Score = 70 (29.7 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 29/111 (26%), Positives = 59/111 (53%)
Query: 261 MIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK-- 318
++ + A+++I + ++IF+V+G T DE + + LR+ +ILAVNK ++ ++
Sbjct: 77 LMNKAASSSIGDVELVIFVVEGTRW-TPDDEMVLNKLREGKAP--VILAVNKVDNVQEKA 133
Query: 319 GIMQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKK--VEGTEDLVEE 367
++ +F + + L I IS TG +D + + ++K E T E+
Sbjct: 134 DLLPHLQFLASQMNFLDIVPISAE-TGLNVDTIAAIVRKHLPEATHHFPED 183
>UNIPROTKB|Q9KPB3 [details] [associations]
symbol:era "GTPase Era" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0042254
GO:GO:0019843 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ PIR:A82073 RefSeq:NP_232089.1 ProteinModelPortal:Q9KPB3
SMR:Q9KPB3 DNASU:2613002 GeneID:2613002 KEGG:vch:VC2460
PATRIC:20083941 Uniprot:Q9KPB3
Length = 325
Score = 126 (49.4 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 49/167 (29%), Positives = 83/167 (49%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+AIVGRPNVGKS++LN L+G+ +I S TTR I T Q +DT G+
Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAI-YVDTPGLH-- 90
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDV--VALVIEAMACITEQDCRIAERIEQEGKGCLI 491
I + + NRA + SDV V V+E T D + ++++ ++
Sbjct: 91 --IEEKRAINRLM--NRAASS-SLSDVNLVLFVVEGTHW-TADDEMVFTKLQKANFPVVL 144
Query: 492 VVNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVD 538
VNK D + ++N+ + ++ ++++ +D PI +A G++ D
Sbjct: 145 CVNKVDQVKDRNE--VMLHMLELSKRMQFVDIVPI---SAKQGKNTD 186
Score = 124 (48.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 32/90 (35%), Positives = 50/90 (55%)
Query: 153 TTIGNVPEHL-LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH 211
+ + + PE+ VAIVGRPNVGKS L N L+G +I +P TR R+ G G +
Sbjct: 20 SVVASTPENQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNY 79
Query: 212 EFMLVDTGGVLNVSKSQPNIMEDLAITTTI 241
+ + VDT G+ K N + + A ++++
Sbjct: 80 QAIYVDTPGLHIEEKRAINRLMNRAASSSL 109
Score = 67 (28.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 30/103 (29%), Positives = 52/103 (50%)
Query: 261 MIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRK-NYMDKFIILAVNKCES--PR 317
++ R A++++ + +++F+V+G TA DE + L+K N+ ++L VNK + R
Sbjct: 100 LMNRAASSSLSDVNLVLFVVEG-THWTADDEMVFTKLQKANFP---VVLCVNKVDQVKDR 155
Query: 318 KGIM-QVSEFWS-LGFSPL-PISAISGTGTGELLDLVCSELKK 357
+M + E + F + PISA G T L V L K
Sbjct: 156 NEVMLHMLELSKRMQFVDIVPISAKQGKNTDVLKKHVRDHLPK 198
>TIGR_CMR|VC_2460 [details] [associations]
symbol:VC_2460 "GTP-binding protein Era" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ PIR:A82073 RefSeq:NP_232089.1 ProteinModelPortal:Q9KPB3
SMR:Q9KPB3 DNASU:2613002 GeneID:2613002 KEGG:vch:VC2460
PATRIC:20083941 Uniprot:Q9KPB3
Length = 325
Score = 126 (49.4 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 49/167 (29%), Positives = 83/167 (49%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+AIVGRPNVGKS++LN L+G+ +I S TTR I T Q +DT G+
Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAI-YVDTPGLH-- 90
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDV--VALVIEAMACITEQDCRIAERIEQEGKGCLI 491
I + + NRA + SDV V V+E T D + ++++ ++
Sbjct: 91 --IEEKRAINRLM--NRAASS-SLSDVNLVLFVVEGTHW-TADDEMVFTKLQKANFPVVL 144
Query: 492 VVNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVD 538
VNK D + ++N+ + ++ ++++ +D PI +A G++ D
Sbjct: 145 CVNKVDQVKDRNE--VMLHMLELSKRMQFVDIVPI---SAKQGKNTD 186
Score = 124 (48.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 32/90 (35%), Positives = 50/90 (55%)
Query: 153 TTIGNVPEHL-LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH 211
+ + + PE+ VAIVGRPNVGKS L N L+G +I +P TR R+ G G +
Sbjct: 20 SVVASTPENQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNY 79
Query: 212 EFMLVDTGGVLNVSKSQPNIMEDLAITTTI 241
+ + VDT G+ K N + + A ++++
Sbjct: 80 QAIYVDTPGLHIEEKRAINRLMNRAASSSL 109
Score = 67 (28.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 30/103 (29%), Positives = 52/103 (50%)
Query: 261 MIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRK-NYMDKFIILAVNKCES--PR 317
++ R A++++ + +++F+V+G TA DE + L+K N+ ++L VNK + R
Sbjct: 100 LMNRAASSSLSDVNLVLFVVEG-THWTADDEMVFTKLQKANFP---VVLCVNKVDQVKDR 155
Query: 318 KGIM-QVSEFWS-LGFSPL-PISAISGTGTGELLDLVCSELKK 357
+M + E + F + PISA G T L V L K
Sbjct: 156 NEVMLHMLELSKRMQFVDIVPISAKQGKNTDVLKKHVRDHLPK 198
>UNIPROTKB|P0A562 [details] [associations]
symbol:era "GTPase Era" species:1773 "Mycobacterium
tuberculosis" [GO:0005829 "cytosol" evidence=IDA] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_00367 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326
PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0042254 EMBL:BX842579 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 HOGENOM:HOG000245596 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 OMA:KVAKDWQ PIR:C70586 RefSeq:NP_336913.1
RefSeq:YP_006515798.1 RefSeq:YP_177873.1 ProteinModelPortal:P0A562
SMR:P0A562 EnsemblBacteria:EBMYCT00000003963
EnsemblBacteria:EBMYCT00000070369 GeneID:13319070 GeneID:886027
GeneID:925918 KEGG:mtc:MT2433 KEGG:mtu:Rv2364c KEGG:mtv:RVBD_2364c
PATRIC:18127100 TubercuList:Rv2364c Uniprot:P0A562
Length = 300
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 55/171 (32%), Positives = 78/171 (45%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+ +VGRPN GKS++ NALVG I S TTR AI + Q L+DT G+ +
Sbjct: 9 VCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQII-LVDTPGLHRP 67
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKG---CL 490
+ G L V + A+ DV+ L I A I D I E++ G +
Sbjct: 68 RTLL--GKRLNDL-VRETYAAV---DVIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLV 121
Query: 491 IVVNKWDTIPNKNQQTATYYEQDVREKLRALDWAPIVYSTAIAGQSVDKII 541
++V K D +P K + A Q V + A IV +A+ G VD +I
Sbjct: 122 VIVTKIDKVP-KEKVVA----QLVAVSELVTNAAEIVPVSAMTGDRVDLLI 167
Score = 108 (43.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 25/56 (44%), Positives = 31/56 (55%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
V +VGRPN GKS L N LVG AI P TR + G + + +LVDT G+
Sbjct: 9 VCLVGRPNTGKSTLTNALVGAKVAITSTRPQTTRHAIRGIVHSDDFQIILVDTPGL 64
Score = 57 (25.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 46/215 (21%), Positives = 91/215 (42%)
Query: 257 RMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNY-MDKFIILAVNKCES 315
R+ ++ R+ AA++ VI + + D I + LR + +++ V K +
Sbjct: 74 RLNDLV-RETYAAVD---VIGLCIPADEAIGPGDRWIVEQLRSTGPANTTLVVIVTKIDK 129
Query: 316 -PRKGIMQ----VSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVEG---TEDLVEE 367
P++ ++ VSE + +P+SA++G L+D++ + L +L +E
Sbjct: 130 VPKEKVVAQLVAVSELVTNAAEIVPVSAMTGDRVDLLIDVLAAALPAGPAYYPDGELTDE 189
Query: 368 ENRIPAIAIVGRPNV-G-KSSILNAL-VGEDRTIVSPISGTTRDAIDTE---FTGPEGQK 421
+ ++ + G + + ++L V D VSP G D ID + + QK
Sbjct: 190 PEEVLMAELIREAALQGVRDELPHSLAVVIDE--VSPREGRD-DLIDVHAALYVERDSQK 246
Query: 422 FRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIR 456
+I G R R ++ S E L + + +R
Sbjct: 247 GIVIGKGGARLREVGTAARSQIENLLGTKVYLDLR 281
>TIGR_CMR|ECH_0476 [details] [associations]
symbol:ECH_0476 "GTP-binding protein Era" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0042254 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 OMA:ITREQLF SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
HOGENOM:HOG000245597 RefSeq:YP_507292.1 ProteinModelPortal:Q2GGZ1
STRING:Q2GGZ1 GeneID:3928006 KEGG:ech:ECH_0476 PATRIC:20576424
BioCyc:ECHA205920:GJNR-478-MONOMER Uniprot:Q2GGZ1
Length = 296
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 41/133 (30%), Positives = 65/133 (48%)
Query: 375 AIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRA 434
AIVG N GKS+++N LVG+ V+P TTR + E + IDT GI
Sbjct: 12 AIVGTTNAGKSTLINMLVGQKVAAVTPKVQTTRVRMHAVLNN-ENVQLIFIDTPGI---- 66
Query: 435 AIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVVN 494
S + E V A+ +++ + V L+++ + + +I RI+Q ++VVN
Sbjct: 67 --FSPKTKLEKFIVKHAWMSLKGIENVILLLDVKNYLNKHIEKIISRIKQSNINAILVVN 124
Query: 495 KWDTIPNKNQQTA 507
K DT+P + A
Sbjct: 125 KIDTVPTSSVDKA 137
>TIGR_CMR|SPO_3895 [details] [associations]
symbol:SPO_3895 "tRNA modification GTPase TrmE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR003593 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0003924
GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 OMA:PGEFSEQ ProtClustDB:PRK05291 RefSeq:YP_169083.1
ProteinModelPortal:Q5LLM7 GeneID:3196284 KEGG:sil:SPO3895
PATRIC:23381297 Uniprot:Q5LLM7
Length = 428
Score = 140 (54.3 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 37/115 (32%), Positives = 61/115 (53%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+AI+G PN GKS++LN L G + + S ++GTTRD I+ G L+DTAG+R+
Sbjct: 216 VAIIGPPNAGKSTLLNMLAGREAALTSEVAGTTRDVIEVRMD-LGGLPVTLLDTAGLRE- 273
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDV-VALV--IEAMAC-ITEQDCRIAERIEQ 484
+G E + + A R ++D+ V L ++AM + D + + +Q
Sbjct: 274 -----TGDLVEGMGIALARRRADQADLRVFLTEDVDAMGVELQPDDLHVLPKADQ 323
Score = 42 (19.8 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 530 TAIAGQSVDKIIVAAEMVDKERSRRLSTAT 559
+ + GQ VD+++ V K RS AT
Sbjct: 332 SGVTGQGVDQLVQRISDVLKTRSSSAGIAT 361
>DICTYBASE|DDB_G0288609 [details] [associations]
symbol:eral1 "GTP-binding protein era homolog"
species:44689 "Dictyostelium discoideum" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 PRINTS:PR00326
dictyBase:DDB_G0288609 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 EMBL:AAFI02000118 RefSeq:XP_636640.1
ProteinModelPortal:Q54IP6 STRING:Q54IP6 EnsemblProtists:DDB0219361
GeneID:8626714 KEGG:ddi:DDB_G0288609 InParanoid:Q54IP6 OMA:DAVKRPT
Uniprot:Q54IP6
Length = 398
Score = 138 (53.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 45/151 (29%), Positives = 73/151 (48%)
Query: 362 EDLVEEEN-RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQ 420
E + EN + +AI+G PN GKS+++N++VGE VSP TTRDA+ ++ + Q
Sbjct: 104 ETPIHNENAKTLNVAIIGAPNAGKSTLVNSIVGEKICAVSPTEHTTRDAVLGIYSKDDTQ 163
Query: 421 KFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAE 480
DT GI K E VN A+ ++ +D+V LV++A + I
Sbjct: 164 -ILFHDTPGIIKN--FNRMAHVREF--VNLAWGVVKEADIVLLVVDATNNNSSDTEFIVG 218
Query: 481 RIEQEGKGCLIVVNKWDTIPNKNQQTATYYE 511
++E++ + + T N TA+ E
Sbjct: 219 KLEEQMLNLIKRMRMEQTNAKANAATASNEE 249
>FB|FBgn0039189 [details] [associations]
symbol:CG18528 species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0046872 GO:GO:0003924
GO:GO:0005622 GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486 KO:K03650
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
TIGRFAMs:TIGR00450 GeneTree:ENSGT00390000016851 EMBL:AY071544
EMBL:AY071692 RefSeq:NP_651251.3 UniGene:Dm.5798 SMR:Q9VC87
IntAct:Q9VC87 MINT:MINT-821147 STRING:Q9VC87
EnsemblMetazoa:FBtr0084628 GeneID:42906 KEGG:dme:Dmel_CG18528
UCSC:CG18528-RA FlyBase:FBgn0039189 InParanoid:Q9VC87 OMA:LTQTRHR
OrthoDB:EOG4HQC0H GenomeRNAi:42906 NextBio:831200 Uniprot:Q9VC87
Length = 493
Score = 139 (54.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 47/144 (32%), Positives = 71/144 (49%)
Query: 376 IVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRAA 435
I+G PNVGKSS+LN L +IV+ +GTTRD I+T G DTAG+R+
Sbjct: 244 IIGAPNVGKSSLLNLLCQRSVSIVTDQAGTTRDIIETMHNFG-GYPVVFSDTAGLRRYTT 302
Query: 436 IASSGSTTEALSVNRAFRAIRRSDVVALVIEA--MACITEQDCRIAERIEQ--------- 484
+ E + RA + +SD++ L+ EA +A +T D +A ++
Sbjct: 303 -----DSIEQEGMQRAKNCLVQSDLILLLAEAKNIAQLTHDDA-VAPFVDSYLGELDIPL 356
Query: 485 ---EGKGCLIVVNKWDTIPNKNQQ 505
GK +V NK DT+ ++ Q
Sbjct: 357 DMCSGKRLQLVANKTDTLTDEEHQ 380
>UNIPROTKB|E1BH64 [details] [associations]
symbol:E1BH64 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0046872 GO:GO:0003924 GO:GO:0006400
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
OMA:PGEFSEQ GeneTree:ENSGT00390000016851 EMBL:DAAA02019078
IPI:IPI00710937 ProteinModelPortal:E1BH64
Ensembl:ENSBTAT00000005506 Uniprot:E1BH64
Length = 493
Score = 137 (53.3 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 41/136 (30%), Positives = 66/136 (48%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+ + G PN GKSS++N L + +IVSP GTTRD ++T G L DTAG+R+
Sbjct: 254 VVVAGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETP-VDLAGFPALLSDTAGLREG 312
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERI-----EQEGKG 488
E V RA + + ++D++ V++A + C + + + G
Sbjct: 313 VG------PVEQEGVRRAQKRLEQADLILAVLDASDLASPASCNFLDTVVIPAGARNPNG 366
Query: 489 C----LIVVNKWDTIP 500
L+V+NK D +P
Sbjct: 367 SRQRLLLVLNKSDLLP 382
>MGI|MGI:1917609 [details] [associations]
symbol:Gtpbp3 "GTP binding protein 3" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 MGI:MGI:1917609 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0006400
CTD:84705 eggNOG:COG0486 HOGENOM:HOG000200714 HOVERGEN:HBG081577
KO:K03650 OrthoDB:EOG4WH8KW InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 HSSP:Q9WYA4
EMBL:AF361482 EMBL:AY029613 EMBL:BC092042 IPI:IPI00338388
IPI:IPI00556865 RefSeq:NP_115933.2 RefSeq:XP_003689533.1
UniGene:Mm.142112 ProteinModelPortal:Q923K4 SMR:Q923K4
STRING:Q923K4 PhosphoSite:Q923K4 PaxDb:Q923K4 PRIDE:Q923K4
Ensembl:ENSMUST00000007754 Ensembl:ENSMUST00000095259
Ensembl:ENSMUST00000150969 GeneID:100862531 GeneID:70359
KEGG:mmu:100862531 KEGG:mmu:70359 GeneTree:ENSGT00390000016851
InParanoid:Q923K4 NextBio:331446 Bgee:Q923K4 CleanEx:MM_GTPBP3
Genevestigator:Q923K4 Uniprot:Q923K4
Length = 492
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 40/135 (29%), Positives = 66/135 (48%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+ + G PN GKSS++N L + +IVSP GTTRD ++T G L DTAG+R+
Sbjct: 252 VVVTGPPNAGKSSLVNLLSQKPVSIVSPEPGTTRDVLETP-VDLAGFPVLLSDTAGLREG 310
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCR---------IAERIEQ 484
E V RA + ++D++ V++A + C +A+ +
Sbjct: 311 VG------AVEQEGVRRARHRLEQADIILGVLDASDLASSSSCSFLDTVVTPLLAQSQDS 364
Query: 485 EGKGCLIVVNKWDTI 499
G+ L+++NK D +
Sbjct: 365 GGQRLLLLLNKSDLL 379
>TIGR_CMR|APH_0350 [details] [associations]
symbol:APH_0350 "GTP-binding protein Era" species:212042
"Anaplasma phagocytophilum HZ" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 GO:GO:0003924
GO:GO:0006184 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0042274
GO:GO:0070181 Gene3D:3.30.300.20 InterPro:IPR015946 OMA:ITREQLF
SUPFAM:SSF54814 eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 HOGENOM:HOG000245597 RefSeq:YP_504957.1
ProteinModelPortal:Q2GKZ4 STRING:Q2GKZ4 GeneID:3930686
KEGG:aph:APH_0350 PATRIC:20949290
BioCyc:APHA212042:GHPM-379-MONOMER Uniprot:Q2GKZ4
Length = 305
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 48/174 (27%), Positives = 85/174 (48%)
Query: 365 VEEEN----RIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQ 420
VE EN + +A+VG N GKS+++N LVG +IV+ TTR +++ EG
Sbjct: 9 VEIENTGLMKCSLVAVVGMTNAGKSTLINKLVGFKASIVTNKVHTTRVKMNSVLN--EGN 66
Query: 421 -KFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIA 479
+ DT GI S + E V A+ +++ +D+V LV++A I +I
Sbjct: 67 VQLVFTDTPGI------FSPKTKLEKFIVKNAWMSMKGADMVILVLDAKRRICVHVEKII 120
Query: 480 ERIEQEGKGCLIVVNKWDTIPNKNQQTATYYEQ-DVREKLRALDWAPIVYSTAI 532
+R++++ + V+NK D + + AT+ E+ + K + +Y T +
Sbjct: 121 KRLQRDNVASIAVINKMDLLDEG--ELATFAERVQLLHKFDRVFTVSSLYGTGV 172
>UNIPROTKB|E2RE04 [details] [associations]
symbol:GTPBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 InterPro:IPR025867 Pfam:PF12631 OMA:IRISGTH
GeneTree:ENSGT00390000016851 EMBL:AAEX03012297
Ensembl:ENSCAFT00000024419 Uniprot:E2RE04
Length = 399
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 41/136 (30%), Positives = 66/136 (48%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
I + G PN GKSS++N L + +IVSP GTTRD ++T G L DTAG+R+
Sbjct: 159 IVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETP-VDLAGFPALLSDTAGLREG 217
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERI---------EQ 484
A E V RA + + ++D++ V++A + + + +
Sbjct: 218 AG------PVEQEGVRRARQRLEQADLILAVLDATDLASPSSRSFLDTVVVPAGAGSPSE 271
Query: 485 EGKGCLIVVNKWDTIP 500
+ L+V+NK D +P
Sbjct: 272 NSQRLLLVLNKSDLLP 287
>RGD|1305367 [details] [associations]
symbol:Gtpbp3 "GTP binding protein 3" species:10116 "Rattus
norvegicus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006400 "tRNA modification" evidence=IEA]
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 RGD:1305367 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0006400 CTD:84705 eggNOG:COG0486
HOGENOM:HOG000200714 HOVERGEN:HBG081577 KO:K03650 OrthoDB:EOG4WH8KW
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
TIGRFAMs:TIGR00450 HSSP:Q9WYA4 GeneTree:ENSGT00390000016851
EMBL:BC087083 IPI:IPI00358231 RefSeq:NP_001011919.1
UniGene:Rn.109111 ProteinModelPortal:Q5PQQ1 STRING:Q5PQQ1
PhosphoSite:Q5PQQ1 PRIDE:Q5PQQ1 Ensembl:ENSRNOT00000060355
GeneID:290633 KEGG:rno:290633 UCSC:RGD:1305367 NextBio:631337
Genevestigator:Q5PQQ1 Uniprot:Q5PQQ1
Length = 492
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 34/109 (31%), Positives = 56/109 (51%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+ + G PN GKSS++N L + +IVSP GTTRD ++T G L DTAG+R+
Sbjct: 252 VVVAGPPNAGKSSLVNLLSQKPVSIVSPEPGTTRDILETP-VDLAGFPVLLSDTAGLREG 310
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERI 482
A E V RA + + ++D++ +++A + C + +
Sbjct: 311 AG------AVEQEGVRRARQRLEQADIILGMLDASDLASSSSCSFLDTV 353
>DICTYBASE|DDB_G0270228 [details] [associations]
symbol:gtpbp3 "GTP-binding protein 3" species:44689
"Dictyostelium discoideum" [GO:0006400 "tRNA modification"
evidence=IEA;ISS] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISS] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 dictyBase:DDB_G0270228
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003924 GO:GO:0006400 HSSP:P25522
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 RefSeq:XP_646629.1
ProteinModelPortal:Q55C52 STRING:Q55C52 EnsemblProtists:DDB0267051
GeneID:8617601 KEGG:ddi:DDB_G0270228 OMA:IRISGTH
ProtClustDB:CLSZ2431449 Uniprot:Q55C52
Length = 512
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/94 (36%), Positives = 49/94 (52%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
IAIVG PN GKSS++N L +IVSPI+GTTRD ++ +G + DTAG+R
Sbjct: 249 IAIVGPPNAGKSSLINLLTNRKASIVSPIAGTTRDIVEV-ILDIDGYPVIIGDTAGLRN- 306
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEA 467
S+ E + A SD+ + ++
Sbjct: 307 ----STNDQIEIEGIEMAKDRFNNSDIKLFLFDS 336
>TIGR_CMR|NSE_0717 [details] [associations]
symbol:NSE_0717 "tRNA modification GTPase TrmE"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR003593 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 SMART:SM00382
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872
GO:GO:0003924 GO:GO:0006400 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
RefSeq:YP_506593.1 ProteinModelPortal:Q2GD53 STRING:Q2GD53
GeneID:3931628 KEGG:nse:NSE_0717 PATRIC:22681449 OMA:IEAHIIT
ProtClustDB:CLSK2528116 BioCyc:NSEN222891:GHFU-729-MONOMER
Uniprot:Q2GD53
Length = 550
Score = 133 (51.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 32/92 (34%), Positives = 48/92 (52%)
Query: 373 AIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRK 432
++ IVG+PNVGKS++ N L D IV+ I GTTRD ++ G L DTAGI++
Sbjct: 214 SVVIVGKPNVGKSTLFNYLAKRDLAIVTDIPGTTRDILEVRLDC-HGYPVILSDTAGIQE 272
Query: 433 RAAIASSGSTTEALSVNRAFRAIRRSDVVALV 464
E + + RA + +DV+ +
Sbjct: 273 TC------DAIEKMGITRALKKATEADVIVFL 298
Score = 122 (48.0 bits), Expect = 0.00040, P = 0.00040
Identities = 45/144 (31%), Positives = 65/144 (45%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V IVG+PNVGKS LFN L + AIV D PG TRD + R + +L DT G+
Sbjct: 215 VVIVGKPNVGKSTLFNYLAKRDLAIVTDIPGTTRDILEVRLDCHGYPVILSDTAGIQETC 274
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE---SCVIIFLVDG 282
+ +E + IT + AT + + + E T E + VI +D
Sbjct: 275 DA----IEKMGIT-----RALKKATEADVIVFLRDITELHLTNVRREDVANSVIERHLDR 325
Query: 283 QAGLTAADEEIADWLRKNYMDKFI 306
Q + E I + + ++DK I
Sbjct: 326 QVAALGSREHIQ--IDQRHVDKLI 347
>UNIPROTKB|Q969Y2 [details] [associations]
symbol:GTPBP3 "tRNA modification GTPase GTPBP3,
mitochondrial" species:9606 "Homo sapiens" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005634 GO:GO:0046872 GO:GO:0003924 GO:GO:0006400
EMBL:CH471106 EMBL:AC010463 CTD:84705 eggNOG:COG0486
HOVERGEN:HBG081577 KO:K03650 OrthoDB:EOG4WH8KW InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 EMBL:AF360742
EMBL:AF361481 EMBL:AF360743 EMBL:AF360744 EMBL:AY078987
EMBL:AY078988 EMBL:AK027606 EMBL:AK291929 EMBL:AK297953
EMBL:BC017207 EMBL:BC019261 IPI:IPI00464994 IPI:IPI00644024
IPI:IPI00783945 IPI:IPI00982192 RefSeq:NP_001122327.1
RefSeq:NP_001182351.1 RefSeq:NP_116009.2 RefSeq:NP_598399.2
UniGene:Hs.334885 HSSP:Q9WYA4 ProteinModelPortal:Q969Y2 SMR:Q969Y2
IntAct:Q969Y2 MINT:MINT-2877402 STRING:Q969Y2 PhosphoSite:Q969Y2
DMDM:74731069 PaxDb:Q969Y2 PRIDE:Q969Y2 DNASU:84705
Ensembl:ENST00000324894 Ensembl:ENST00000358792
Ensembl:ENST00000361619 GeneID:84705 KEGG:hsa:84705 UCSC:uc002ngg.4
UCSC:uc002ngh.4 UCSC:uc010eas.3 GeneCards:GC19P017448
H-InvDB:HIX0014890 HGNC:HGNC:14880 HPA:HPA042158 MIM:580000
MIM:608536 neXtProt:NX_Q969Y2 PharmGKB:PA134883205 OMA:PGEFSEQ
GenomeRNAi:84705 NextBio:74792 ArrayExpress:Q969Y2 Bgee:Q969Y2
CleanEx:HS_GTPBP3 Genevestigator:Q969Y2 Uniprot:Q969Y2
Length = 492
Score = 128 (50.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 39/135 (28%), Positives = 63/135 (46%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+ + G PN GKSS++N L + +IVSP GTTRD ++T G L DTAG+R+
Sbjct: 252 VVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETP-VDLAGFPVLLSDTAGLREG 310
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRI---------AERIEQ 484
E V RA + ++D++ +++A + C A+
Sbjct: 311 VG------PVEQEGVRRARERLEQADLILAMLDASDLASPSSCNFLATVVASVGAQSPSD 364
Query: 485 EGKGCLIVVNKWDTI 499
+ L+V+NK D +
Sbjct: 365 SSQRLLLVLNKSDLL 379
>POMBASE|SPAC222.05c [details] [associations]
symbol:mss1 "mitochondrial GTPase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003924 "GTPase
activity" evidence=ISM] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005743 "mitochondrial
inner membrane" evidence=ISO] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006400 "tRNA modification" evidence=ISO]
[GO:0006412 "translation" evidence=ISO] [GO:0032543 "mitochondrial
translation" evidence=NAS] InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 PomBase:SPAC222.05c GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0005743 GO:GO:0003924 GO:GO:0032543 GO:GO:0006400
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:IRISGTH PIR:T50146 RefSeq:NP_593144.1 ProteinModelPortal:Q9UTE7
STRING:Q9UTE7 EnsemblFungi:SPAC222.05c.1 GeneID:2541951
KEGG:spo:SPAC222.05c OrthoDB:EOG4B2X62 NextBio:20803035
Uniprot:Q9UTE7
Length = 496
Score = 127 (49.8 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 30/59 (50%), Positives = 37/59 (62%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRK 432
+AI+G N GKSS++N L +IVSP SGTTRDAI+ G L DTAG+RK
Sbjct: 242 VAILGPSNAGKSSLINLLANRRISIVSPQSGTTRDAIEV-LVDINGFPVLLSDTAGLRK 299
>UNIPROTKB|Q5SM23 [details] [associations]
symbol:era "GTPase Era" species:300852 "Thermus
thermophilus HB8" [GO:0000028 "ribosomal small subunit assembly"
evidence=IDA] [GO:0043024 "ribosomal small subunit binding"
evidence=IDA] [GO:0070181 "SSU rRNA binding" evidence=IDA]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PRINTS:PR00326 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0000028 EMBL:AP008226 GenomeReviews:AP008226_GR GO:GO:0070181
GO:GO:0043024 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ HOGENOM:HOG000245597 RefSeq:YP_143386.1 PDB:1WF3
PDB:1X18 PDB:1X1L PDBsum:1WF3 PDBsum:1X18 PDBsum:1X1L
ProteinModelPortal:Q5SM23 SMR:Q5SM23 STRING:Q5SM23 GeneID:3167951
KEGG:ttj:TTHA0120 PATRIC:23955177 EvolutionaryTrace:Q5SM23
Uniprot:Q5SM23
Length = 301
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 42/141 (29%), Positives = 68/141 (48%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQK-FRLIDTAGIRK 432
+AIVG+PNVGKS++LN L+G +SP TTR + T EG++ +DT G+ K
Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILT--EGRRQIVFVDTPGLHK 67
Query: 433 RAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAERIEQ-EGK-GCL 490
+ + G + + A+ + V V++ T +D +A ++ GK L
Sbjct: 68 --PMDALGEFMD----QEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPIL 121
Query: 491 IVVNKWDTIPNKNQQTATYYE 511
+V NK D + Y+E
Sbjct: 122 LVGNKLDAAKYPEEAMKAYHE 142
Score = 116 (45.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
VAIVG+PNVGKS L N L+G A + P TR R+ G G + + VDT G+
Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGL 65
Score = 41 (19.5 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 262 IERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAV-NKCES---PR 317
++++ A+ + ++++VD + T DE +A L K + K IL V NK ++ P
Sbjct: 76 MDQEVYEALADVNAVVWVVDLRHPPTPEDELVARAL-KPLVGKVPILLVGNKLDAAKYPE 134
Query: 318 KGIMQVSEFWSLGFSPLPISAISGTGTGEL-LDLV 351
+ + E P +SA+ EL DL+
Sbjct: 135 EAMKAYHELLPEA-EPRMLSALDERQVAELKADLL 168
>UNIPROTKB|Q3AFV0 [details] [associations]
symbol:hflX "GTPase HflX" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00900 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016496 Pfam:PF01926 PIRSF:PIRSF006809 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG2262 HOGENOM:HOG000260368
PANTHER:PTHR10229 TIGRFAMs:TIGR03156 RefSeq:YP_358984.1
ProteinModelPortal:Q3AFV0 STRING:Q3AFV0 GeneID:3728580
KEGG:chy:CHY_0112 PATRIC:21273415 KO:K03665 OMA:LEKILQC
ProtClustDB:CLSK2526657 BioCyc:CHYD246194:GJCN-112-MONOMER
InterPro:IPR025121 Pfam:PF13167 Uniprot:Q3AFV0
Length = 414
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 43/153 (28%), Positives = 67/153 (43%)
Query: 354 ELKKVEGTEDLVEE---ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI 410
ELK++E + E +P +A+VG N GKS++LNAL G + T D
Sbjct: 170 ELKEIEQNRKVKRSRRLEAGVPIVALVGYTNAGKSTLLNALTGAGVLAEDKLFATL-DPT 228
Query: 411 DTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMAC 470
+ T P GQK LIDT G + + L V + ++++ V++
Sbjct: 229 VRKLTLPGGQKLLLIDTVGFIENMPPLIKEAFKSTLEV------VHEAELILHVVDGANP 282
Query: 471 ITEQDCRIAERIEQEGK---GCLIVVNKWDTIP 500
E+ + E+I E K + V NK D +P
Sbjct: 283 YREEQEAVVEKILTEMKVRVPVITVYNKVDLLP 315
>TIGR_CMR|CHY_0112 [details] [associations]
symbol:CHY_0112 "GTP-binding protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00900 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016496 Pfam:PF01926 PIRSF:PIRSF006809 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG2262 HOGENOM:HOG000260368
PANTHER:PTHR10229 TIGRFAMs:TIGR03156 RefSeq:YP_358984.1
ProteinModelPortal:Q3AFV0 STRING:Q3AFV0 GeneID:3728580
KEGG:chy:CHY_0112 PATRIC:21273415 KO:K03665 OMA:LEKILQC
ProtClustDB:CLSK2526657 BioCyc:CHYD246194:GJCN-112-MONOMER
InterPro:IPR025121 Pfam:PF13167 Uniprot:Q3AFV0
Length = 414
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 43/153 (28%), Positives = 67/153 (43%)
Query: 354 ELKKVEGTEDLVEE---ENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI 410
ELK++E + E +P +A+VG N GKS++LNAL G + T D
Sbjct: 170 ELKEIEQNRKVKRSRRLEAGVPIVALVGYTNAGKSTLLNALTGAGVLAEDKLFATL-DPT 228
Query: 411 DTEFTGPEGQKFRLIDTAGIRKRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMAC 470
+ T P GQK LIDT G + + L V + ++++ V++
Sbjct: 229 VRKLTLPGGQKLLLIDTVGFIENMPPLIKEAFKSTLEV------VHEAELILHVVDGANP 282
Query: 471 ITEQDCRIAERIEQEGK---GCLIVVNKWDTIP 500
E+ + E+I E K + V NK D +P
Sbjct: 283 YREEQEAVVEKILTEMKVRVPVITVYNKVDLLP 315
>ASPGD|ASPL0000044917 [details] [associations]
symbol:AN1666 species:162425 "Emericella nidulans"
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR006073 InterPro:IPR024929 Pfam:PF01926 PRINTS:PR00326
GO:GO:0005525 GO:GO:0005730 EMBL:BN001307 GO:GO:0030687
GO:GO:0000055 Gene3D:1.10.1580.10 InterPro:IPR023179
HOGENOM:HOG000189714 OMA:IEPNRKW InterPro:IPR012971
PANTHER:PTHR11089:SF9 Pfam:PF08153 ProteinModelPortal:C8VNL5
EnsemblFungi:CADANIAT00008307 Uniprot:C8VNL5
Length = 560
Score = 123 (48.4 bits), Expect = 0.00032, P = 0.00032
Identities = 48/179 (26%), Positives = 84/179 (46%)
Query: 233 EDLAITTTIGMEGIPLATREAAVARMPSM-IERQATAAIEESCVIIFLVDGQAGLTAADE 291
+D+A ++G +P +REA + S I + I+ S V+I ++D +
Sbjct: 196 DDVATDLSVGT--LP-TSREAVFLKGQSKRIWNELYKVIDSSDVVIHVIDARDPEGTRCR 252
Query: 292 EIADWLRKNYMDKFIILAVNKCESPRKGIMQV-SEFWSLGFSPLPISA-ISGT-GTGELL 348
I ++R+ K +I +NKC+ G+ S + L A I+ + G G L+
Sbjct: 253 GIEKYIREEAPHKHLIFVLNKCDLVPTGVAAAWVRHLSKDYPTLAFHASINNSFGKGSLI 312
Query: 349 DLVCSELKKVEGTEDLVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTR 407
L L++ L + +I ++ ++G PN GKSSI+N L + V+PI G T+
Sbjct: 313 QL----LRQFSS---LHSDRKQI-SVGLIGYPNTGKSSIINTLRKKKVCTVAPIPGETK 363
>TIGR_CMR|APH_1288 [details] [associations]
symbol:APH_1288 "tRNA modification GTPase TrmE"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ RefSeq:YP_505803.1 ProteinModelPortal:Q2GIJ8
STRING:Q2GIJ8 GeneID:3930863 KEGG:aph:APH_1288 PATRIC:20951370
ProtClustDB:PRK05291 BioCyc:APHA212042:GHPM-1290-MONOMER
Uniprot:Q2GIJ8
Length = 445
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
RV I+G PN GKS LFN + N AIV + PG TRD + G + ++++DT G+
Sbjct: 219 RVVILGPPNAGKSTLFNSIARRNAAIVSEHPGTTRDVLEVAIDIGGYPYIVLDTAGI 275
>TIGR_CMR|CBU_1502 [details] [associations]
symbol:CBU_1502 "GTP-binding protein Era" species:227377
"Coxiella burnetii RSA 493" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0016049 "cell growth" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0042254 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0019843 Gene3D:3.30.300.20
InterPro:IPR015946 SUPFAM:SSF54814 eggNOG:COG1159
HOGENOM:HOG000245596 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 EMBL:L27436 PIR:S60768 RefSeq:NP_820485.1
ProteinModelPortal:P51836 SMR:P51836 GeneID:1209412
KEGG:cbu:CBU_1502 PATRIC:17931769 OMA:KVAKDWQ
BioCyc:CBUR227377:GJ7S-1487-MONOMER Uniprot:P51836
Length = 295
Score = 121 (47.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 43/129 (33%), Positives = 64/129 (49%)
Query: 375 AIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKRA 434
AI+GRPNVGKS++LN L+ + +I S TTR I T + Q +DT G+
Sbjct: 10 AIIGRPNVGKSTLLNQLLEQKISITSRKPQTTRYQILGVKTFKDIQVI-YVDTPGLH--- 65
Query: 435 AIASSGSTTEALSVNRAFR-AIRRSDVVALVIEAMACITEQDCRIAERIEQEGKGCLIVV 493
A + T +NR R A+R D + VIE QD + + +++ +V+
Sbjct: 66 --AGTERTINRY-MNRTARGALRDVDAIVFVIEPHW--ESQDAWVLDNLKEIETPVFLVI 120
Query: 494 NKWDTIPNK 502
NK D I N+
Sbjct: 121 NKVDKIKNR 129
Score = 37 (18.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 514 VREKLRALDWAPIVYS---TAIAGQSVDKII-VAAEMVDKERSRR 554
+REKL L I YS T I + +KII ++A + +++S++
Sbjct: 195 IREKLMRLLGQEIPYSLAVTLIEFRKEEKIIRISAVIWVEKKSQK 239
>UNIPROTKB|A8JBB8 [details] [associations]
symbol:CHLREDRAFT_206017 "Putative uncharacterized protein"
species:3055 "Chlamydomonas reinhardtii" [GO:0003924 "GTPase
activity" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006184 "GTP catabolic process" evidence=IBA] [GO:0042254
"ribosome biogenesis" evidence=IBA] InterPro:IPR006073 Pfam:PF01926
GO:GO:0005525 GO:GO:0005829 GO:GO:0003924 GO:GO:0042254
eggNOG:COG1161 KO:K14539 EMBL:DS496152 RefSeq:XP_001699204.1
ProteinModelPortal:A8JBB8 STRING:A8JBB8 EnsemblPlants:EDO98844
GeneID:5724819 KEGG:cre:CHLREDRAFT_206017 ProtClustDB:CLSN2923134
Uniprot:A8JBB8
Length = 582
Score = 108 (43.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 27/66 (40%), Positives = 36/66 (54%)
Query: 346 ELLDLV---CSELKKVEGTED-LVEEENRIPAIAIVGRPNVGKSSILNALVGEDRTIVSP 401
ELLDL C G +D ++ R + +VG PNVGKSS +NAL G +T V+P
Sbjct: 296 ELLDLFEAKCCAAVAAAGEDDPRAGDKERKHMVGLVGYPNVGKSSTINALFGAKKTAVAP 355
Query: 402 ISGTTR 407
G T+
Sbjct: 356 TPGKTK 361
Score = 59 (25.8 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 264 RQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
RQ +E S +++ +VD + L E++ + R+ + K +L +NK +
Sbjct: 168 RQLWRVLERSDIVVQVVDARDPLLYRSEDLENMARELHASKSSLLLLNKAD 218
>POMBASE|SPBC26H8.08c [details] [associations]
symbol:grn1 "GTPase Grn1" species:4896
"Schizosaccharomyces pombe" [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISM] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] InterPro:IPR006073
Pfam:PF01926 PRINTS:PR00326 PomBase:SPBC26H8.08c GO:GO:0005525
GO:GO:0040010 GO:GO:0005730 GO:GO:0051301 GO:GO:0015031
EMBL:CU329671 GO:GO:0003924 GenomeReviews:CU329671_GR GO:GO:0003723
GO:GO:0006364 HSSP:P38424 eggNOG:COG1161 HOGENOM:HOG000207716
KO:K14538 OMA:PNICPFK Gene3D:1.10.1580.10 InterPro:IPR014813
InterPro:IPR023179 Pfam:PF08701 PIR:T40020 RefSeq:NP_596651.1
ProteinModelPortal:O74791 STRING:O74791 PRIDE:O74791
EnsemblFungi:SPBC26H8.08c.1 GeneID:2540469 KEGG:spo:SPBC26H8.08c
OrthoDB:EOG4350FT NextBio:20801596 GO:GO:0000054 Uniprot:O74791
Length = 470
Score = 119 (46.9 bits), Expect = 0.00067, P = 0.00067
Identities = 56/242 (23%), Positives = 111/242 (45%)
Query: 263 ERQATAAIEESCVIIFLVDGQ--AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI 320
+++ +E S VI++++D + G + D E L + +K +I +NK + +
Sbjct: 153 DKEFKKVVEASDVILYVLDARDPEGTRSKDVE-RQVLASSAEEKRLIFVINKIDLVPSEV 211
Query: 321 MQVSEFWSLGFSP-LPISAISGTGTGELL-------DLVCSELKKVEGTEDLVEEENRIP 372
+ + F P +P+ + SG+G L + + LK ++ + ++ +
Sbjct: 212 LNKWVTYLRNFFPTIPMRSASGSGNSNLKHQSASASSTISNLLKSLKSYSAKKKLKSSL- 270
Query: 373 AIAIVGRPNVGKSSILNALVGED---RTIVSP---ISGTTRDAIDTEFTGPEGQKFRLID 426
+ ++G PNVGKSS++NALV R+ P ++G T + + K RL+D
Sbjct: 271 TVGVIGYPNVGKSSVINALVNRSANGRSAPCPAGNVAGMTTSLREVKLDN----KLRLVD 326
Query: 427 TAGIRKRAAIASSGSTTEA--LSVNRAFRAIRRSDVVAL---VIEAMACITEQDCRIAER 481
+ GI SS S + L + A + + D VA+ +++ ++ + Q R+ +R
Sbjct: 327 SPGI----VFPSSDSKDDLYRLVMLNAVSSTKVDDPVAVASYILQFLSRVPGQLERMFQR 382
Query: 482 IE 483
E
Sbjct: 383 YE 384
>UNIPROTKB|Q5TKI5 [details] [associations]
symbol:OSJNBb0048I21.12 "Os05g0430400 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0003924 "GTPase
activity" evidence=IBA] [GO:0006184 "GTP catabolic process"
evidence=IBA] [GO:0042254 "ribosome biogenesis" evidence=IBA]
InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
GO:GO:0003924 GO:GO:0042254 EMBL:AP008211 EMBL:CM000142
eggNOG:COG1161 Gene3D:1.10.1580.10 InterPro:IPR023179
InterPro:IPR019991 TIGRFAMs:TIGR03596 EMBL:AC130600 EMBL:AK063573
RefSeq:NP_001055624.1 UniGene:Os.10470 STRING:Q5TKI5
EnsemblPlants:LOC_Os05g35540.1 GeneID:4338877 KEGG:osa:4338877
OMA:MANDIGE ProtClustDB:CLSN2690276 Uniprot:Q5TKI5
Length = 371
Score = 117 (46.2 bits), Expect = 0.00076, P = 0.00076
Identities = 37/100 (37%), Positives = 49/100 (49%)
Query: 162 LLPRVA---IVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
LLPR IVG PNVGKS+L NRL+ PGVTR+ + R F + E L+D+
Sbjct: 208 LLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVR-FGSDLE--LLDS 264
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARM 258
G+L + S LAI IG A A + ++
Sbjct: 265 PGILPMRISDQTAAIKLAICDDIGERSYDFADVAAILVQL 304
>TIGR_CMR|ECH_0060 [details] [associations]
symbol:ECH_0060 "tRNA modification GTPase TrmE"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0003924 GO:GO:0006400 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 ProtClustDB:PRK05291 OMA:IDFPEEV
RefSeq:YP_506891.1 ProteinModelPortal:Q2GI42 STRING:Q2GI42
GeneID:3927317 KEGG:ech:ECH_0060 PATRIC:20575687
BioCyc:ECHA205920:GJNR-60-MONOMER Uniprot:Q2GI42
Length = 439
Score = 122 (48.0 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 35/119 (29%), Positives = 58/119 (48%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIR-- 431
+ I+G PN GKS++ N L D IVS +GTTRD ++ G +IDTAGIR
Sbjct: 214 VTILGEPNSGKSTLFNHLAKRDIAIVSEYAGTTRDPLEAHID-VAGYPIIIIDTAGIRES 272
Query: 432 ---------KRAAIASSGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDCRIAER 481
KRA + + + + + + R I ++++L+ + CI + I ++
Sbjct: 273 TDPVEQEGIKRAKLKAENADFKIVMLPYEKRDIFNREIMSLIDDKSICILSKADNITDQ 331
Score = 39 (18.8 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 114 EREAKDAVREYSSLLSR 130
E +AK A+R+ S +L +
Sbjct: 134 EMQAKQAIRQMSGVLEK 150
>ZFIN|ZDB-GENE-050522-335 [details] [associations]
symbol:gtpbp3 "GTP binding protein 3" species:7955
"Danio rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 ZFIN:ZDB-GENE-050522-335 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0006400
EMBL:BC095801 IPI:IPI00500987 RefSeq:NP_001018605.1
UniGene:Dr.41738 HSSP:P25522 ProteinModelPortal:Q501Z5 SMR:Q501Z5
STRING:Q501Z5 GeneID:553807 KEGG:dre:553807 CTD:84705
eggNOG:COG0486 HOGENOM:HOG000200714 HOVERGEN:HBG081577
InParanoid:Q501Z5 KO:K03650 OrthoDB:EOG4WH8KW NextBio:20880525
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
TIGRFAMs:TIGR00450 Uniprot:Q501Z5
Length = 500
Score = 125 (49.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 32/93 (34%), Positives = 48/93 (51%)
Query: 374 IAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPEGQKFRLIDTAGIRKR 433
+ I G N GKSS+LN L IVSP +GTTRD ++ G L DTAG+R
Sbjct: 251 VVIAGSTNAGKSSLLNLLTQRPAAIVSPTAGTTRDVLEVPLD-IGGYPVLLSDTAGLR-- 307
Query: 434 AAIASSGSTTEALSVNRAFRAIRRSDVVALVIE 466
+ + E V RA + + ++D+ +V++
Sbjct: 308 ----DTSDSVEQEGVRRARQRVEQADLSLVVVD 336
Score = 37 (18.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 354 ELKKVEGTEDLVEEE 368
+L +VEG DL+ E
Sbjct: 153 DLTEVEGLSDLIHAE 167
>UNIPROTKB|Q2GGM7 [details] [associations]
symbol:engB "Probable GTP-binding protein EngB"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00321 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR019987 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0007049 GO:GO:0000917 eggNOG:COG0218 HOGENOM:HOG000009835
KO:K03978 ProtClustDB:PRK00454 TIGRFAMs:TIGR03598
RefSeq:YP_507406.1 ProteinModelPortal:Q2GGM7 STRING:Q2GGM7
GeneID:3927892 KEGG:ech:ECH_0595 PATRIC:20576646 OMA:YEIAQCI
BioCyc:ECHA205920:GJNR-597-MONOMER Uniprot:Q2GGM7
Length = 200
Score = 94 (38.1 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 25/70 (35%), Positives = 38/70 (54%)
Query: 153 TTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNR-AIVVDEPGVTRDRMYGRSFWGEH 211
T I ++P+ +P +AI GR NVGKS+L N + + A +PG T+ + +
Sbjct: 17 THIKSLPDFSIPEIAIAGRSNVGKSSLINAITNNKKNAKTSSKPGCTKQINF---YLINK 73
Query: 212 EFM-LVDTGG 220
+FM LVD G
Sbjct: 74 DFMVLVDLPG 83
Score = 56 (24.8 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 21/89 (23%), Positives = 41/89 (46%)
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW----SLGF 331
+I L+D + G D + +WL + + ++L K + +K ++ V+ + +L F
Sbjct: 114 VILLIDAKVGFKEIDLDFINWLELHQIHYQLVLT--KIDKIKKEMLDVNVNYIKNLNLDF 171
Query: 332 SPLPISAISGT---GTGELLDLVCSELKK 357
PI + S G EL+ + +KK
Sbjct: 172 IMYPIISTSSQCKQGIEELIYEIAQCIKK 200
>TIGR_CMR|ECH_0595 [details] [associations]
symbol:ECH_0595 "GTP-binding protein EngB" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00321 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR019987 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0007049 GO:GO:0000917
eggNOG:COG0218 HOGENOM:HOG000009835 KO:K03978 ProtClustDB:PRK00454
TIGRFAMs:TIGR03598 RefSeq:YP_507406.1 ProteinModelPortal:Q2GGM7
STRING:Q2GGM7 GeneID:3927892 KEGG:ech:ECH_0595 PATRIC:20576646
OMA:YEIAQCI BioCyc:ECHA205920:GJNR-597-MONOMER Uniprot:Q2GGM7
Length = 200
Score = 94 (38.1 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 25/70 (35%), Positives = 38/70 (54%)
Query: 153 TTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNR-AIVVDEPGVTRDRMYGRSFWGEH 211
T I ++P+ +P +AI GR NVGKS+L N + + A +PG T+ + +
Sbjct: 17 THIKSLPDFSIPEIAIAGRSNVGKSSLINAITNNKKNAKTSSKPGCTKQINF---YLINK 73
Query: 212 EFM-LVDTGG 220
+FM LVD G
Sbjct: 74 DFMVLVDLPG 83
Score = 56 (24.8 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 21/89 (23%), Positives = 41/89 (46%)
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW----SLGF 331
+I L+D + G D + +WL + + ++L K + +K ++ V+ + +L F
Sbjct: 114 VILLIDAKVGFKEIDLDFINWLELHQIHYQLVLT--KIDKIKKEMLDVNVNYIKNLNLDF 171
Query: 332 SPLPISAISGT---GTGELLDLVCSELKK 357
PI + S G EL+ + +KK
Sbjct: 172 IMYPIISTSSQCKQGIEELIYEIAQCIKK 200
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 666 564 0.00078 120 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 88
No. of states in DFA: 618 (66 KB)
Total size of DFA: 286 KB (2150 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.62u 0.12s 43.74t Elapsed: 00:00:02
Total cpu time: 43.65u 0.12s 43.77t Elapsed: 00:00:02
Start: Sat May 11 01:35:23 2013 End: Sat May 11 01:35:25 2013