BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005980
(666 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255556614|ref|XP_002519341.1| Chromatin remodelling complex ATPase chain isw-1, putative [Ricinus
communis]
gi|223541656|gb|EEF43205.1| Chromatin remodelling complex ATPase chain isw-1, putative [Ricinus
communis]
Length = 674
Score = 1057 bits (2734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/672 (76%), Positives = 587/672 (87%), Gaps = 12/672 (1%)
Query: 1 MEVDDEWEFSAEELDFLEREALQQIA-------QRHSKPFSD---SPSYKVEALPQGSRT 50
M+ +D+W S EELD LE++A +IA RH S + ++V++ P T
Sbjct: 1 MDFEDDWGLSVEELDSLEKDAYMKIAQQQRQQQNRHFHSLSKKGIALLFQVQSSPSQPTT 60
Query: 51 LPLSVAPAPKGSLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNA 110
L +AP K + S + +PKLSVKF LH +GNIAAKF+YDPVLV+A RK+PKATW+A
Sbjct: 61 LLTPIAP--KANPEHESSKILPKLSVKFILHATGNIAAKFSYDPVLVAAIRKVPKATWDA 118
Query: 111 KERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHI 170
KERLW FP+ LSSAEK+L+E SG++VE+ENL PLVQRA+A+ASA PDL++ Y ++P +I
Sbjct: 119 KERLWIFPMSSLSSAEKILNETSGFSVEVENLDPLVQRAVAAASAVPDLQDWYVKVPDYI 178
Query: 171 ESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLH 230
ESKLL FQRDGVRF LQHGGR L+ADEMGLGKT+QAIAV C RD WPVLILTPSSLRLH
Sbjct: 179 ESKLLSFQRDGVRFVLQHGGRALIADEMGLGKTLQAIAVTACLRDFWPVLILTPSSLRLH 238
Query: 231 WAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQ 290
WA+MIQQWL+IP S+I+VVLSQ GSNR GFTIVSSNTK +I LDGLFNIISYDVV KLQ
Sbjct: 239 WASMIQQWLHIPSSDILVVLSQWSGSNRGGFTIVSSNTKGSIHLDGLFNIISYDVVPKLQ 298
Query: 291 NILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLE 350
N+LM+S FK+VIADESHF+KNAQAKRT A+LP+IKKAQYA+LLSGTPALSRPIELFKQLE
Sbjct: 299 NVLMASEFKVVIADESHFMKNAQAKRTTASLPVIKKAQYAVLLSGTPALSRPIELFKQLE 358
Query: 351 ALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKR 410
ALYPDVY+NVHEYGNRYC+GG+FG+YQGASNHEELHNLMKATVMIRRLKKDVLA+LP+KR
Sbjct: 359 ALYPDVYRNVHEYGNRYCRGGIFGVYQGASNHEELHNLMKATVMIRRLKKDVLAELPLKR 418
Query: 411 RQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEA 470
RQQVFLD+AEKDM++I ALFRELEVVKGKIKAC S EEV+SLKF+EKN+INKIYTDSAEA
Sbjct: 419 RQQVFLDLAEKDMKKINALFRELEVVKGKIKACSSAEEVESLKFSEKNIINKIYTDSAEA 478
Query: 471 KIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVT 530
KIP VLDYL TVIEAGCKFLIFAHHQPM+D+IH+ +KKKV CIRIDG TPP SRQ+LVT
Sbjct: 479 KIPGVLDYLATVIEAGCKFLIFAHHQPMIDSIHEFLVKKKVGCIRIDGRTPPVSRQSLVT 538
Query: 531 EFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNV 590
+FQEKD +KAAVLS+KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVN+
Sbjct: 539 DFQEKDAIKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNI 598
Query: 591 YYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKRCN 650
YYLLANDTVDDI+WDVV+SKLENLGQ+LDGHEN+LEVS+SQ RSSPAKQKTLDSFLKRC+
Sbjct: 599 YYLLANDTVDDIIWDVVQSKLENLGQMLDGHENALEVSASQQRSSPAKQKTLDSFLKRCS 658
Query: 651 NVDDSEHQQKLK 662
N+D+ E Q KLK
Sbjct: 659 NMDELEQQTKLK 670
>gi|356545812|ref|XP_003541328.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Glycine max]
Length = 665
Score = 1038 bits (2684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/660 (74%), Positives = 581/660 (88%), Gaps = 5/660 (0%)
Query: 1 MEVDDEWEFSAEELDFLEREALQQIAQRHSKPFSDSPSY--KVEALPQGSRTLPLSVAPA 58
MEV+D+W+ SAE+LD LER+A Q+IAQ + S + +V+A QG+R LP ++
Sbjct: 1 MEVEDDWDLSAEDLDSLERDAFQKIAQLRNPTPPPSSPHPIQVDAFSQGARALPTTLK-- 58
Query: 59 PKGSLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFP 118
G+ D +++PK SVKFFLH+SGN+AAKF YD V+++AFR+IP+++WNAKERLW FP
Sbjct: 59 -SGTNNDNQAKELPKFSVKFFLHSSGNVAAKFQYDQVVIAAFRRIPRSSWNAKERLWIFP 117
Query: 119 VPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQ 178
+ LS AEKV+ EI GYNV+++NL PLVQRAI +ASA PDL+++Y +IP+ IESKLLPFQ
Sbjct: 118 LSSLSEAEKVIGEIPGYNVQVDNLDPLVQRAIVAASAVPDLQDRYHKIPSFIESKLLPFQ 177
Query: 179 RDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQW 238
R+GVRF LQHGGR+LLADEMGLGKT+QAIAVA+C +D WPVLI+ PSSLRL WA+MIQQW
Sbjct: 178 REGVRFILQHGGRVLLADEMGLGKTLQAIAVASCVQDSWPVLIIAPSSLRLQWASMIQQW 237
Query: 239 LNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNF 298
LNIP S+I++VLSQ GGSNR GF IVSS+ K +I LDGLFNIISYD+V KLQN+LM+ NF
Sbjct: 238 LNIPSSDILIVLSQNGGSNRGGFNIVSSSAKSSIHLDGLFNIISYDLVPKLQNMLMTCNF 297
Query: 299 KIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYK 358
K+VIADESHFLKNAQAKRT A+LP+IKKAQYALLLSGTPALSRPIELFKQLEALYPDVY+
Sbjct: 298 KVVIADESHFLKNAQAKRTTASLPVIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYR 357
Query: 359 NVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDV 418
NVHEYGNRYCKGG FG+YQGASNHEELHNL+KATVMIRRLKKDVL+QLPVKRRQQVFLD+
Sbjct: 358 NVHEYGNRYCKGGFFGVYQGASNHEELHNLIKATVMIRRLKKDVLSQLPVKRRQQVFLDL 417
Query: 419 AEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDY 478
A KDM+QI ALFRELE+VK KIKA KS+EE +SLKF +KNLINKIYTDSAEAKIP+VLDY
Sbjct: 418 AGKDMKQINALFRELEMVKAKIKAAKSQEEAESLKFAQKNLINKIYTDSAEAKIPSVLDY 477
Query: 479 LETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDV 538
+ TVIEAGCKFLIFAHHQPM+D+IH+ LKKKV CIRIDG TP ASRQ LVT+FQEKD +
Sbjct: 478 VGTVIEAGCKFLIFAHHQPMIDSIHEFLLKKKVGCIRIDGSTPAASRQQLVTDFQEKDSI 537
Query: 539 KAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
KAAVLS+KAGGVGLTLTAASTVIF+ELSWTPGDLIQAEDRAHRIGQVSSVN+YYLLANDT
Sbjct: 538 KAAVLSIKAGGVGLTLTAASTVIFSELSWTPGDLIQAEDRAHRIGQVSSVNIYYLLANDT 597
Query: 599 VDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKRCNNVDDSEHQ 658
VDDI+WDVV++KLENLGQ+LDGHEN+LEVS+S +SP+KQKTLD F++RC+N D E++
Sbjct: 598 VDDIIWDVVQNKLENLGQMLDGHENALEVSASLPVNSPSKQKTLDQFVRRCDNTDGLEYE 657
>gi|225432202|ref|XP_002269671.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1 [Vitis
vinifera]
gi|297736823|emb|CBI26024.3| unnamed protein product [Vitis vinifera]
Length = 677
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/682 (75%), Positives = 584/682 (85%), Gaps = 27/682 (3%)
Query: 1 MEVDDEWEFSAEELDFLEREALQQIAQR--------------HS-----KPFSDSPSYKV 41
ME +D W+ SAEELD LER+A +QIA R HS P S KV
Sbjct: 1 METED-WDLSAEELDSLERDAFRQIALRNSSSSTASVSNNSIHSSNPNPNPIIPSLPRKV 59
Query: 42 EALPQGSRTLPLSVAPAPKGSLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFR 101
+ LP GSR P P + + SKE + KLSVKFFLH SGNIAAKF+YDPV+V AFR
Sbjct: 60 DDLPPGSRI------PPPSTVVSNCSKE-LHKLSVKFFLHASGNIAAKFSYDPVVVGAFR 112
Query: 102 KIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLRE 161
KI KA+WNAKERLW FP+ LSSAEKVL EI+G NVEIEN+ PLV+RAI +A+A PDLR+
Sbjct: 113 KISKASWNAKERLWMFPLSSLSSAEKVLHEITGINVEIENIDPLVRRAIDAATAVPDLRD 172
Query: 162 KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
+YD+IP++IE+KLLPFQRDG+RF LQHGGR+LLADEMGLGKT+QAIAV TC RD WPVL+
Sbjct: 173 RYDRIPSYIETKLLPFQRDGIRFVLQHGGRVLLADEMGLGKTLQAIAVTTCVRDSWPVLV 232
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
LTPSSLRLHWA+MIQQWLNIP S+I+VVLSQ GSNR GF IV SNTK I LDG+FNII
Sbjct: 233 LTPSSLRLHWASMIQQWLNIPSSDILVVLSQWSGSNRGGFRIVPSNTKGTIHLDGVFNII 292
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSR 341
SYDVVLKLQ IL S FK+VIADESHFLKNAQAKRT+A+LP+++KAQY +LLSGTPALSR
Sbjct: 293 SYDVVLKLQKILAESEFKVVIADESHFLKNAQAKRTSASLPVLQKAQYTILLSGTPALSR 352
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKD 401
PIELFKQLEALYPDVY+NVHEYGNRYCKGGVFG+YQGASNHEELHNLMKATV+IRRLKKD
Sbjct: 353 PIELFKQLEALYPDVYRNVHEYGNRYCKGGVFGMYQGASNHEELHNLMKATVLIRRLKKD 412
Query: 402 VLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLIN 461
VL++LPVKRRQQVFLD+ EKDM+QI ALFRELEVVK KIKA KS+EE +SLKF+EKNLIN
Sbjct: 413 VLSELPVKRRQQVFLDLDEKDMKQINALFRELEVVKSKIKASKSKEEAESLKFSEKNLIN 472
Query: 462 KIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
KIYTDSA+AKIPAVLDYL TV+EAGCKFLIFAHHQPM+D+I Q +KKKV CIRIDG TP
Sbjct: 473 KIYTDSAQAKIPAVLDYLGTVVEAGCKFLIFAHHQPMIDSIFQFLVKKKVGCIRIDGSTP 532
Query: 522 PASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHR 581
+SRQA VT+FQEKD +KAAVLS+KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDR HR
Sbjct: 533 SSSRQAFVTDFQEKDTIKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRVHR 592
Query: 582 IGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKT 641
IGQVSSVN++YLLANDTVDDI+WDVV+SKLENLGQ+LDGHEN+LEVS SQ RSSP+KQ+T
Sbjct: 593 IGQVSSVNIHYLLANDTVDDIIWDVVQSKLENLGQMLDGHENTLEVSVSQPRSSPSKQRT 652
Query: 642 LDSFLKRCNNVDDSEHQQKLKY 663
+DSF+KRCNNVD+ EHQ LK+
Sbjct: 653 IDSFMKRCNNVDNPEHQPNLKH 674
>gi|356564685|ref|XP_003550580.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Glycine max]
Length = 751
Score = 1024 bits (2647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/703 (70%), Positives = 581/703 (82%), Gaps = 48/703 (6%)
Query: 1 MEVDDEWEFSAEELDFLEREALQQIAQ-----------RHS-----------KPFSDSPS 38
MEV+D+W+ SAE+LD LER+A Q+IAQ RH KP DS
Sbjct: 44 MEVEDDWDLSAEDLDSLERDAFQKIAQLRNPTPSSPHQRHHSATATTNHLPPKPLPDSRP 103
Query: 39 YKVEALPQGSRTLPLSVAPAPKGSLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVS 98
L Q +R LP S G+ D +++PK SVKFFLH+SGN+AAKF YD V+++
Sbjct: 104 QTAGTLSQAARALPTSFK---SGTNNDKQSKELPKFSVKFFLHSSGNVAAKFQYDQVVIA 160
Query: 99 AFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPD 158
AFR+IP+++WNAKERLW FP+ L AEKVL EI Y+V+++NL PLV+RA+A+ASA PD
Sbjct: 161 AFRRIPRSSWNAKERLWIFPLSSLLEAEKVLGEIPSYSVQVDNLDPLVKRAVAAASAVPD 220
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWP 218
L+++Y +IP++IESKLLPFQR+GVRF LQHGGR+LLADEMGLGKT+QAIAVA+C +D+WP
Sbjct: 221 LQDRYHKIPSYIESKLLPFQREGVRFILQHGGRVLLADEMGLGKTLQAIAVASCIQDLWP 280
Query: 219 VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
VLI+ PSSLRL WA+MIQQWLNIP S+I++VLSQ GGSNR GF IVSS+ K +I LDGLF
Sbjct: 281 VLIIAPSSLRLQWASMIQQWLNIPSSDILIVLSQSGGSNRGGFNIVSSSAKSSIRLDGLF 340
Query: 279 NIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPA 338
NIISYD+V KLQN+LM+ +FK+VIADESHFLKNAQAKRT A+LP+IKKAQYALLLSGTPA
Sbjct: 341 NIISYDLVPKLQNMLMTHDFKVVIADESHFLKNAQAKRTTASLPVIKKAQYALLLSGTPA 400
Query: 339 LSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRL 398
LSRPIELFKQLEALYPDVY+NVHEYGNRYCKGGVFG+YQGASNHEELHNL+KATVMIRRL
Sbjct: 401 LSRPIELFKQLEALYPDVYRNVHEYGNRYCKGGVFGVYQGASNHEELHNLIKATVMIRRL 460
Query: 399 KKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKN 458
KKDVL+QLPVKRRQQVFLD+ KDM+QI ALF+ELE+VK KIKA KS+EE +SLKF +KN
Sbjct: 461 KKDVLSQLPVKRRQQVFLDLENKDMKQINALFQELEMVKAKIKAAKSQEEAESLKFAQKN 520
Query: 459 LINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDG 518
LINKIYTDSAEAKIP+VLDY+ TVIEAGCKFLIFAHHQPM+D+IH+ LKKKV CIRIDG
Sbjct: 521 LINKIYTDSAEAKIPSVLDYIGTVIEAGCKFLIFAHHQPMIDSIHEFLLKKKVGCIRIDG 580
Query: 519 GTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDR 578
GTP ASRQ LVT+FQEKD +KAAVLS+KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDR
Sbjct: 581 GTPAASRQQLVTDFQEKDAIKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDR 640
Query: 579 AHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSS-------- 630
AHRIGQVSSVN+YYLLANDTVDDI+WDVV+SKLENLGQ+LDGHEN LEVS+S
Sbjct: 641 AHRIGQVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQMLDGHENVLEVSASLPVNSPSK 700
Query: 631 ---------------QIRSSPAKQKTLDSFLKRCNNVDDSEHQ 658
+ SSP+KQKTLD F++RC+N D E++
Sbjct: 701 QKTIDQYVRKSDNMGSLVSSPSKQKTLDQFVRRCDNTDRLEYE 743
>gi|224110292|ref|XP_002315473.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222864513|gb|EEF01644.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 670
Score = 1024 bits (2647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/669 (75%), Positives = 568/669 (84%), Gaps = 10/669 (1%)
Query: 4 DDEWEFSAEELDFLEREALQQIAQRHSKPFSDSPSYKVEALPQGSRTLPLSVAPAPKGSL 63
DD+W SAEE D LER+AL +IA + + + A ++ + + K
Sbjct: 1 DDDWGLSAEEFDSLERDALLKIASQQQQQQQQQQQQQPSASSSFNQQQNQQLHFSNKPIF 60
Query: 64 GDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLS 123
SK+ +PKLSVKF LH +GNIAAKF YDPVLV A RK+PKA WNAKERLW FPV L
Sbjct: 61 NSPSKKALPKLSVKFILHATGNIAAKFLYDPVLVGALRKVPKANWNAKERLWIFPVSSLL 120
Query: 124 SAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVR 183
SAEKVLSEISG+NVE+E L LVQRAIA+AS APDLR+ YD+IP HIESKL+PFQRDGVR
Sbjct: 121 SAEKVLSEISGFNVEVEKLDTLVQRAIAAASVAPDLRDWYDRIPDHIESKLMPFQRDGVR 180
Query: 184 FALQHGGRILLADEMGLGKTIQAI---------AVATCFRDVWPVLILTPSSLRLHWAAM 234
F LQHGGR LLADEMGLGKT+QAI +++TC R+ WPVLIL PSSLRLHWA+
Sbjct: 181 FVLQHGGRALLADEMGLGKTLQAIYLLISISILSISTCVRNSWPVLILAPSSLRLHWAST 240
Query: 235 IQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILM 294
I QWL+IP S+I+VVLSQ GSNR+GF IVSS ++ I LDGLFNIISYD V KLQN LM
Sbjct: 241 IHQWLDIPSSDILVVLSQSSGSNRAGFNIVSS-SRSTIRLDGLFNIISYDAVPKLQNKLM 299
Query: 295 SSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYP 354
+S FK+VIADESHFLKNAQAKRT A+LP+IKKAQYA+LLSGTPALSRPIELFKQLEALYP
Sbjct: 300 TSEFKVVIADESHFLKNAQAKRTTASLPVIKKAQYAILLSGTPALSRPIELFKQLEALYP 359
Query: 355 DVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQV 414
DVYKNVHEYGNRYCKGG+FG+YQGASNHEELHNL+KATVMIRRLKKDVL++LPVKRRQQV
Sbjct: 360 DVYKNVHEYGNRYCKGGIFGVYQGASNHEELHNLIKATVMIRRLKKDVLSELPVKRRQQV 419
Query: 415 FLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPA 474
FLD+ EKDM+QI LFRELEVVKGKIKAC S+EEV+SLKFTEKNLINKIYTDSAEAKI
Sbjct: 420 FLDLPEKDMKQINTLFRELEVVKGKIKACASDEEVESLKFTEKNLINKIYTDSAEAKISG 479
Query: 475 VLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE 534
VLDYL TVIEAGCKFLIFAHHQ M+D+IH+ LKKKV CIRIDG T ASRQALVT+FQE
Sbjct: 480 VLDYLGTVIEAGCKFLIFAHHQSMIDSIHEFLLKKKVGCIRIDGKTAAASRQALVTDFQE 539
Query: 535 KDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLL 594
KD +KAAVLS++AGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVN+YYLL
Sbjct: 540 KDAIKAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIYYLL 599
Query: 595 ANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKRCNNVDD 654
ANDTVDDI+WDVV+SKLENLGQ+LDG E +LEVS+SQ RSSPAKQ+TLD+++KRC+N+DD
Sbjct: 600 ANDTVDDIIWDVVQSKLENLGQMLDGQEKTLEVSASQQRSSPAKQRTLDTYMKRCSNLDD 659
Query: 655 SEHQQKLKY 663
SEHQ KLKY
Sbjct: 660 SEHQPKLKY 668
>gi|297852448|ref|XP_002894105.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297339947|gb|EFH70364.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 673
Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/670 (72%), Positives = 561/670 (83%), Gaps = 14/670 (2%)
Query: 5 DEWE-FSAEELDFLEREALQQI-AQRHSKPFSDSP-SYKVEALPQGSRTLPLSVAPAPKG 61
D+W+ + EE+D +E+EALQ+I QR+S S P +V A QG+R LP ++AP P
Sbjct: 2 DDWDDLTVEEMDAIEKEALQRINQQRNSSSSSSLPIPNEVHASSQGARILPSTLAPKPNT 61
Query: 62 SLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPF 121
G +EQ K+SVK FLH SG +AAKF Y+ V+V A RKIPKA WNAKERLWTFP
Sbjct: 62 DAGFKPQEQ--KVSVKIFLHHSGVLAAKFPYNQVVVDAVRKIPKAIWNAKERLWTFPHSS 119
Query: 122 LSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDG 181
LSSAE +L EIS VEIENL PLVQRAIASAS PDLR Y++IP+HIE KLLPFQR+G
Sbjct: 120 LSSAENILREISSVKVEIENLDPLVQRAIASASRGPDLRHLYEKIPSHIEPKLLPFQREG 179
Query: 182 VRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNI 241
+ F LQHGGR+LLADEMGLGKT+QAIAV TC + WPVLI+ PSSLRLHWA MI QWL++
Sbjct: 180 IEFILQHGGRVLLADEMGLGKTLQAIAVTTCVHESWPVLIIAPSSLRLHWATMIHQWLHV 239
Query: 242 PPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PPS+IVVVL Q GGSN+ G+TIVSSNTK I LDG+FNI+SYDVV KL +LM+ +FK+V
Sbjct: 240 PPSDIVVVLPQPGGSNKCGYTIVSSNTKGTIHLDGVFNIVSYDVVTKLDKLLMALDFKVV 299
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
IADESH+LKNAQAKRT+A LP+IKKAQYA+LLSGTPALSRPIELFKQLEALYPDVY+NVH
Sbjct: 300 IADESHYLKNAQAKRTSACLPVIKKAQYAILLSGTPALSRPIELFKQLEALYPDVYRNVH 359
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
EYG+RYCKGG FG YQGASNHEELHNLMKATVMIRRLKKDVL +LP KRRQQVFLD+AEK
Sbjct: 360 EYGSRYCKGGFFGAYQGASNHEELHNLMKATVMIRRLKKDVLTELPSKRRQQVFLDLAEK 419
Query: 422 DMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLET 481
DM+QI ALF EL VVK KIK C SE++++SLKFTEKNLINKIYTDSA AKIPAVLDYL T
Sbjct: 420 DMKQINALFHELRVVKSKIKDCVSEDDIKSLKFTEKNLINKIYTDSAGAKIPAVLDYLGT 479
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
V+EAGCKFL+FAHHQ MLDAIHQ KKKV CIRIDG TP +SRQALV++FQ+KD++KAA
Sbjct: 480 VLEAGCKFLVFAHHQSMLDAIHQFLKKKKVGCIRIDGSTPASSRQALVSDFQDKDEIKAA 539
Query: 542 VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 601
VLS++A GVG+TLTAASTVIFAEL+WTPGDLIQAEDRAHRIGQVSSVN++YLLANDTVDD
Sbjct: 540 VLSIRAAGVGITLTAASTVIFAELAWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVDD 599
Query: 602 IVWDVVRSKLENLGQVLDGHENSLEVSSSQI-------RSSPAKQKTLDSFLKRCNNVDD 654
I+WDVV+SKL+NLGQ+LDG EN+LEVSSS + R+SP KQ+TL+ FLKRC +DD
Sbjct: 600 IIWDVVQSKLDNLGQMLDGQENALEVSSSHMMSSPTKPRNSPTKQQTLEPFLKRCKKLDD 659
Query: 655 S--EHQQKLK 662
EHQ + K
Sbjct: 660 DTEEHQPRPK 669
>gi|449459866|ref|XP_004147667.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Cucumis sativus]
Length = 725
Score = 981 bits (2535), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/723 (69%), Positives = 570/723 (78%), Gaps = 66/723 (9%)
Query: 4 DDEWEFSAEELDFLEREALQQIAQ------------------------------------ 27
DD+W + EELD LER+A+Q+IAQ
Sbjct: 7 DDDWNLTPEELDSLERDAVQKIAQLQNSAAASSSSFNAFVPCSASNQHPHQSFQSNTHFN 66
Query: 28 ------------RHSKPFSDSP-----SYKVEALPQGSRTLPLSVAPAP----KGSLGDF 66
H F S Y+ A+ S PL+ A P K +GD
Sbjct: 67 SGVNKAKISNPNAHDSAFQPSQLNPVLGYRSRAVENAS---PLAGALPPSAAAKEHVGDE 123
Query: 67 SKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAE 126
++ PKLSVKFFLH+SGN+AAKF+YD VL+ A RKIPKATWN KERLW FPV LS AE
Sbjct: 124 GAKERPKLSVKFFLHSSGNVAAKFSYDQVLIDAVRKIPKATWNGKERLWMFPVSSLSVAE 183
Query: 127 KVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFAL 186
VL ++ G+ VE+ENL LV RAI +AS PDLR+KY+++PA IES LLPFQR+GVRF L
Sbjct: 184 SVLRDVVGFKVEVENLDNLVHRAIVAASLVPDLRDKYNKLPADIESMLLPFQREGVRFIL 243
Query: 187 QHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEI 246
QHGGR LLADEMGLGKT+QAIAVA C R+ WPVLILTPSSLRLHWAAMIQQWL IP S+I
Sbjct: 244 QHGGRALLADEMGLGKTLQAIAVAACVREAWPVLILTPSSLRLHWAAMIQQWLKIPSSDI 303
Query: 247 VVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADES 306
VVLSQ GSN+ GFTI+SS++K ++ LDGLFNIISYDVV KLQNILM+S FK+VIADES
Sbjct: 304 HVVLSQYCGSNKGGFTILSSSSKSSLHLDGLFNIISYDVVQKLQNILMASEFKVVIADES 363
Query: 307 HFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNR 366
HF+KNAQAKRT A +P+I+KAQYA+LLSGTPALSRPIEL KQLEALYP+VYKNVHEYGNR
Sbjct: 364 HFMKNAQAKRTVACVPVIQKAQYAILLSGTPALSRPIELLKQLEALYPNVYKNVHEYGNR 423
Query: 367 YCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI 426
YCKGG FG+YQGASNH ELHNLMKAT+MIRRLKKDVL++LP KRRQQVFLD+AEKD+R+I
Sbjct: 424 YCKGGTFGLYQGASNHVELHNLMKATLMIRRLKKDVLSELPQKRRQQVFLDLAEKDIREI 483
Query: 427 YALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAG 486
ALF ELEVVKGKIKAC+S EEV+SLKF +KNLINKIYTDSAEAKIPAVL+YLETVIEAG
Sbjct: 484 RALFCELEVVKGKIKACRS-EEVESLKFQQKNLINKIYTDSAEAKIPAVLNYLETVIEAG 542
Query: 487 CKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMK 546
CKFL+FAHHQPM+DAIHQ F KKKV+CIRIDGGTPPA RQALV+EFQ+KD + AAVLS+K
Sbjct: 543 CKFLVFAHHQPMIDAIHQFFQKKKVNCIRIDGGTPPAMRQALVSEFQQKDSIMAAVLSIK 602
Query: 547 AGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDV 606
AGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVN++YLLANDTVDDI+WDV
Sbjct: 603 AGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIWDV 662
Query: 607 VRSKLENLGQVLDGHENSLEVSSSQ---IRSSP-AKQKTLDSFLKRCNNVDDSEHQQKLK 662
V+SKLENLGQ+LDG EN+LEV+ Q SSP +KQKTLDSF+KRCNN + Q KLK
Sbjct: 663 VQSKLENLGQMLDGEENTLEVAVKQQPITSSSPNSKQKTLDSFIKRCNNA-SVDTQSKLK 721
Query: 663 YRK 665
K
Sbjct: 722 LPK 724
>gi|449498863|ref|XP_004160655.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Cucumis sativus]
Length = 725
Score = 978 bits (2527), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/723 (69%), Positives = 569/723 (78%), Gaps = 66/723 (9%)
Query: 4 DDEWEFSAEELDFLEREALQQIAQ------------------------------------ 27
DD+W + EELD LER+A+Q+IAQ
Sbjct: 7 DDDWNLTPEELDSLERDAVQKIAQLQNSAAASSSSFNAFVPCSASNQHPHQSFQSNTHFN 66
Query: 28 ------------RHSKPFSDSP-----SYKVEALPQGSRTLPLSVAPAP----KGSLGDF 66
H F S Y+ A+ S PL+ A P K +GD
Sbjct: 67 SGVNKAKISNPNAHDSAFQPSQLNPVLGYRSRAVENAS---PLAGALPPSAAAKEHVGDE 123
Query: 67 SKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAE 126
++ PKLSVKFFLH+SGN+AAKF+YD VL+ A RKIPKATWN KERLW FPV LS AE
Sbjct: 124 GAKERPKLSVKFFLHSSGNVAAKFSYDQVLIDAVRKIPKATWNGKERLWMFPVSSLSVAE 183
Query: 127 KVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFAL 186
VL ++ G+ VE+ENL LV RAI +AS PDLR+KY+++PA IES LLPFQR+GVRF L
Sbjct: 184 SVLRDVVGFKVEVENLDNLVHRAIVAASLVPDLRDKYNKLPADIESMLLPFQREGVRFIL 243
Query: 187 QHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEI 246
QHGGR LLADEMGLGKT+QAIAVA C R+ WPVLILTPSSLRLHWAAMIQQWL IP S+I
Sbjct: 244 QHGGRALLADEMGLGKTLQAIAVAACVREAWPVLILTPSSLRLHWAAMIQQWLKIPSSDI 303
Query: 247 VVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADES 306
VVLSQ GSN+ GFTI+SS++K ++ LDGLFNIISYDVV KLQNILM+S FK+VIADES
Sbjct: 304 HVVLSQYCGSNKGGFTILSSSSKSSLHLDGLFNIISYDVVQKLQNILMASEFKVVIADES 363
Query: 307 HFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNR 366
HF+KNAQAKRT A +P+I+KAQYA+LLSGTPALSRPIEL KQLEALYP+VYK VHEYGNR
Sbjct: 364 HFMKNAQAKRTVACVPVIQKAQYAILLSGTPALSRPIELLKQLEALYPNVYKKVHEYGNR 423
Query: 367 YCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI 426
YCKGG FG+YQGASNH ELHNLMKAT+MIRRLKKDVL++LP KRRQQVFLD+AEKD+R+I
Sbjct: 424 YCKGGTFGLYQGASNHVELHNLMKATLMIRRLKKDVLSELPQKRRQQVFLDLAEKDIREI 483
Query: 427 YALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAG 486
ALF ELEVVKGKIKAC+S EEV+SLKF +KNLINKIYTDSAEAKIPAVL+YLETVIEAG
Sbjct: 484 RALFCELEVVKGKIKACRS-EEVESLKFQQKNLINKIYTDSAEAKIPAVLNYLETVIEAG 542
Query: 487 CKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMK 546
CKFL+FAHHQPM+DAIHQ F KKKV+CIRIDGGTPPA RQALV+EFQ+KD + AAVLS+K
Sbjct: 543 CKFLVFAHHQPMIDAIHQFFQKKKVNCIRIDGGTPPAMRQALVSEFQQKDSIMAAVLSIK 602
Query: 547 AGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDV 606
AGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVN++YLLANDTVDDI+WDV
Sbjct: 603 AGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIWDV 662
Query: 607 VRSKLENLGQVLDGHENSLEVSSSQ---IRSSP-AKQKTLDSFLKRCNNVDDSEHQQKLK 662
V+SKLENLGQ+LDG EN+LEV+ Q SSP +KQKTLDSF+KRCNN + Q KLK
Sbjct: 663 VQSKLENLGQMLDGEENTLEVAVKQQPITSSSPNSKQKTLDSFIKRCNNA-SVDTQSKLK 721
Query: 663 YRK 665
K
Sbjct: 722 LPK 724
>gi|42562605|ref|NP_175265.3| chromatin remodeling factor18 [Arabidopsis thaliana]
gi|332194152|gb|AEE32273.1| chromatin remodeling factor18 [Arabidopsis thaliana]
Length = 673
Score = 974 bits (2518), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/667 (71%), Positives = 555/667 (83%), Gaps = 13/667 (1%)
Query: 3 VDDEWEFSAEELDFLEREALQQI-AQRHSKPFSDSP-SYKVEALPQGSRTLPLSVAPAPK 60
+DD W+ + EE+D +E EALQ+I QR+S S P +V QG+R LP ++AP P
Sbjct: 1 MDDFWDLTVEEMDAIENEALQRINQQRNSSSSSSLPIPNEVHTSSQGARILPSTLAPKPN 60
Query: 61 GSLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVP 120
G SK Q K+SVK LH+SG +AAKF Y+ V+V A RKIPKA WNAKERLWTFP
Sbjct: 61 TDAG--SKPQEQKVSVKILLHSSGVLAAKFPYNQVVVDAVRKIPKAIWNAKERLWTFPHS 118
Query: 121 FLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRD 180
LSSAE +L EIS VEIENL PLVQRAIASAS PDLR Y++IP+HIE KLLPFQR+
Sbjct: 119 SLSSAENILREISSVKVEIENLDPLVQRAIASASRVPDLRHLYEKIPSHIEPKLLPFQRE 178
Query: 181 GVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLN 240
G+ F LQHGGR+LLADEMGLGKT+QAIAV TC ++ WPVLI+ PSSLRLHWA MI QWL+
Sbjct: 179 GIEFILQHGGRVLLADEMGLGKTLQAIAVTTCVQESWPVLIIAPSSLRLHWATMIHQWLH 238
Query: 241 IPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKI 300
+PPS+IVVVL Q GGSN+ GFTIVSSNTK I LDG+FNI+SYDVV KL +LM+ +FK+
Sbjct: 239 VPPSDIVVVLPQPGGSNKCGFTIVSSNTKGTIHLDGVFNIVSYDVVTKLDKLLMALDFKV 298
Query: 301 VIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNV 360
VIADESHFLKN QAKRT+A LP+IKKAQYA+LLSGTPALSRPIELFKQLEALYPDVY+N+
Sbjct: 299 VIADESHFLKNGQAKRTSACLPVIKKAQYAILLSGTPALSRPIELFKQLEALYPDVYRNI 358
Query: 361 HEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAE 420
HEYG RYCKGG FG YQGASNH+ELHNLMKATVMIRRLKKDVL +LP KRRQQVFLD+A
Sbjct: 359 HEYGGRYCKGGFFGTYQGASNHDELHNLMKATVMIRRLKKDVLTELPSKRRQQVFLDLAA 418
Query: 421 KDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLE 480
KDM+QI ALF EL+VVK KIK C SE++++SLKF EKNLINKIYTDSA AKIPAVLDYLE
Sbjct: 419 KDMKQINALFHELKVVKSKIKDCISEDDIKSLKFIEKNLINKIYTDSAVAKIPAVLDYLE 478
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
VIEAGCKFL+FAHHQ ML+ +HQ KKKV CIRIDG TP +SRQALV++FQ+KD++KA
Sbjct: 479 NVIEAGCKFLVFAHHQSMLEELHQFLKKKKVGCIRIDGSTPASSRQALVSDFQDKDEIKA 538
Query: 541 AVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
AVLS++A GVG+TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVN++YLLANDTVD
Sbjct: 539 AVLSIRAAGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVD 598
Query: 601 DIVWDVVRSKLENLGQVLDGHENSLEVSSSQI-------RSSPAKQKTLDSFLKRCNNVD 653
DI+WDVV+SKL+NLGQ+LDG EN+L+V+SS + R+SP KQ+TL+ FLKRC +D
Sbjct: 599 DIIWDVVQSKLDNLGQMLDGQENALDVASSHMMSSPTKPRNSPTKQQTLEPFLKRCKRLD 658
Query: 654 DS--EHQ 658
D EHQ
Sbjct: 659 DDTEEHQ 665
>gi|357479211|ref|XP_003609891.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein [Medicago truncatula]
gi|355510946|gb|AES92088.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein [Medicago truncatula]
Length = 764
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/740 (66%), Positives = 568/740 (76%), Gaps = 89/740 (12%)
Query: 1 MEVDDEWEFSAEELDFLEREALQQIAQ------RHSKPFSDSPSYKVEALPQG-SRTLPL 53
ME +D W+ S E+LD LER+A Q+IAQ P S +V+ALPQG +R LP
Sbjct: 1 MEPED-WDLSGEDLDSLERDAFQKIAQLRSHPSNPPPPPPPSRPQRVDALPQGPARPLPN 59
Query: 54 SVAPAPKGSLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKER 113
+ A + S +++ K SVKFFLH++GNIAAKF YD V+V+AFR+IPK+ WNAKER
Sbjct: 60 NTNNAVEHS------KELTKASVKFFLHSTGNIAAKFQYDQVIVAAFRRIPKSFWNAKER 113
Query: 114 LWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESK 173
LW FP+ LS AEKVL ++SGYNV++ENL PLVQRAI +A++ PDLR++YD+IP+ +ESK
Sbjct: 114 LWLFPLSSLSEAEKVLKDVSGYNVQVENLDPLVQRAITAATSVPDLRDRYDKIPSDVESK 173
Query: 174 LLPFQRDGVRFALQHGGRILLADEMGLGKTIQAI--------------------AVATCF 213
LLPFQRDG+RF LQHGGR LADEMGLGKT+QAI A A C
Sbjct: 174 LLPFQRDGIRFILQHGGRAFLADEMGLGKTLQAIDCLKLNYFHTFNCVLCVYMYASALCS 233
Query: 214 RDV--------WP-----------------------------------VLILTPSSLRLH 230
+ + WP VLIL PS+LRL
Sbjct: 234 KYIYLIETHLGWPGGIGLGSGSVLRLKISSSIPSGAIGVAACVQDSWPVLILAPSALRLQ 293
Query: 231 WAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQ 290
WA+MIQQWLNIP S+I+VVLSQ+GGSNR GF IVSS+ K I LDGLFNIISYD+V K+Q
Sbjct: 294 WASMIQQWLNIPSSDILVVLSQIGGSNRGGFNIVSSSVKSKIHLDGLFNIISYDLVPKMQ 353
Query: 291 NILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLE 350
+ LM S+FK+VIADESHFLKNAQAKRT A+LP+IKKAQYA+LLSGTPALSRPIELFKQLE
Sbjct: 354 STLMESDFKVVIADESHFLKNAQAKRTTASLPVIKKAQYAILLSGTPALSRPIELFKQLE 413
Query: 351 ALYPDVYKNVHEYGNRYCKG----------GVFGIYQGASNHEELHNLMKATVMIRRLKK 400
ALYPDVYKNVHEYGNRYCKG G+FG+YQGASNHEELHNLMKAT MIRRLKK
Sbjct: 414 ALYPDVYKNVHEYGNRYCKGSSLSFAWILQGMFGVYQGASNHEELHNLMKATTMIRRLKK 473
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLI 460
DVL++LPVKRRQQVFLD+A+KDM+QI ALFRELE VK KIKA KS+EE +SLKF+++N+I
Sbjct: 474 DVLSELPVKRRQQVFLDLADKDMKQINALFRELERVKAKIKAAKSQEEAESLKFSKQNMI 533
Query: 461 NKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
NK+YTDSAEAKIPAVLDYL TVIEAGCKFLIFAHH PM+DAIH+ LKKKV CIRIDGGT
Sbjct: 534 NKLYTDSAEAKIPAVLDYLGTVIEAGCKFLIFAHHLPMIDAIHEFLLKKKVACIRIDGGT 593
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P SRQ LVTEFQEKD +KAAVLS+KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDR H
Sbjct: 594 PSGSRQQLVTEFQEKDTIKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRVH 653
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ-IRSSPAKQ 639
RIGQ SSVN+YYLLANDTVDDI+WD V+SKLENLGQ+LDGHEN+L+VS Q SSPAKQ
Sbjct: 654 RIGQESSVNIYYLLANDTVDDIIWDTVQSKLENLGQMLDGHENTLKVSDDQPPLSSPAKQ 713
Query: 640 KTLDSFLKRCNNVDDS-EHQ 658
KTLD F++RC+N EHQ
Sbjct: 714 KTLDHFVRRCDNSTGGLEHQ 733
>gi|357121797|ref|XP_003562604.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
[Brachypodium distachyon]
Length = 703
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/679 (65%), Positives = 538/679 (79%), Gaps = 28/679 (4%)
Query: 10 SAEELDFLEREALQQIAQRHSKPFSDSPSYKVEALPQG--------SRTLPLSVAPAPKG 61
+ E+LD LER++ + +A+R + + S + LP S L V PA +
Sbjct: 21 TEEQLDKLERDSYRVLAERKASSSTSSTAPATSPLPNPALSPAARVSSPLRNDVHPASRV 80
Query: 62 SL-GDFSKEQ-------------------VPKLSVKFFLHTSGNIAAKFTYDPVLVSAFR 101
SL F K + +PK SV+ FLH+SG IAAKF Y+ LV AF
Sbjct: 81 SLESRFGKAESPSPSRHSQPTAVNNTQGSLPKTSVQLFLHSSGVIAAKFPYNQKLVDAFH 140
Query: 102 KIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLRE 161
KIPKA+WN KER+W FP L+ AE+VL + G E+ L PLVQRA +A A DLR
Sbjct: 141 KIPKASWNGKERVWIFPPTSLAIAEEVLHAVPGLAAELHKLDPLVQRAFDAALAVKDLRG 200
Query: 162 KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
YD+IP +ESKL+PFQR+GVRF+LQHGGR+L+ADEMGLGKT+QAIAVA+C D WPVL+
Sbjct: 201 LYDRIPTDVESKLMPFQREGVRFSLQHGGRVLIADEMGLGKTLQAIAVASCLHDAWPVLV 260
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
++PSSLRLHWA MIQQWLNIP +I+VVL Q GGSN++GF +V SNTK + LDG+FN+I
Sbjct: 261 ISPSSLRLHWATMIQQWLNIPTEDILVVLPQTGGSNKAGFRLVYSNTKGDFDLDGVFNVI 320
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSR 341
SYDV+ K+Q+ L+ +FKIVIADESHFLKNAQAKRT A+LP+++KAQY +LLSGTPALSR
Sbjct: 321 SYDVIPKIQSTLLDLDFKIVIADESHFLKNAQAKRTIASLPVLQKAQYVVLLSGTPALSR 380
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKD 401
PIELF QL+ALYP+VYKNV+EYGNRYCKGG FG+YQGASNHEELHNLMKATVMIRRLKKD
Sbjct: 381 PIELFTQLQALYPNVYKNVNEYGNRYCKGGFFGMYQGASNHEELHNLMKATVMIRRLKKD 440
Query: 402 VLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLIN 461
VL++LPVKRRQQVFLD++EK+M+ I ALFRELE VK K+++C S+E SLKF +KN+IN
Sbjct: 441 VLSELPVKRRQQVFLDLSEKEMKHIRALFRELETVKIKMQSCDSKEMFDSLKFNQKNIIN 500
Query: 462 KIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
KIYTDSA+AKIPAVLDYL TVIEA CKFLIFAHHQPM+DAIHQ LKKKV+CIRIDG TP
Sbjct: 501 KIYTDSADAKIPAVLDYLGTVIEADCKFLIFAHHQPMIDAIHQHLLKKKVNCIRIDGQTP 560
Query: 522 PASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHR 581
A RQ LVT+FQ KDD+KAAVLS+KAGGVGLTLTAASTVIFAELSWTPGD+IQAEDRAHR
Sbjct: 561 VAVRQTLVTDFQNKDDIKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDIIQAEDRAHR 620
Query: 582 IGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKT 641
IGQVSSVN+YYLLAN+TVDDI+WDVV+ KLENLGQ+LDG E +L+ S S+ R SP+KQKT
Sbjct: 621 IGQVSSVNIYYLLANETVDDIIWDVVQGKLENLGQMLDGQEKTLDCSQSETRPSPSKQKT 680
Query: 642 LDSFLKRCNNVDDSEHQQK 660
LDS+LKRC+ +++ K
Sbjct: 681 LDSYLKRCSTSTETQPSAK 699
>gi|218200089|gb|EEC82516.1| hypothetical protein OsI_27014 [Oryza sativa Indica Group]
Length = 700
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/682 (65%), Positives = 538/682 (78%), Gaps = 35/682 (5%)
Query: 10 SAEELDFLEREALQQIAQR-------------------------HSKPFS----DSPSYK 40
SAE+LD LER+A +++A+R H P S +S K
Sbjct: 21 SAEQLDQLERDAYRKLAERKASSSAASTATSPLPSAAYSPVKNSHHHPASRVSQESCFGK 80
Query: 41 VEALPQGSRTLPLSVAPAPKGSLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAF 100
VE+L + P ++ A S G+ SK +SV FLH++G IAAKF Y LV A
Sbjct: 81 VESLSPSRLSQPNALGNAVNNSQGNLSK-----VSVHLFLHSTGVIAAKFQYHQKLVDAV 135
Query: 101 RKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLR 160
KIPKA+WN KER+W FP LS AE+VLS + G VE++ L PLV+RA+ ++ A DLR
Sbjct: 136 HKIPKASWNGKERVWMFPHSSLSVAEEVLSTVPGIAVEVQKLDPLVKRALTASLYAGDLR 195
Query: 161 EKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
+ Y +IP +ESKL+PFQR+GVRFALQHG R L+ADEMGLGKT+QAIAVA+C D WPVL
Sbjct: 196 DLYGKIPTDVESKLMPFQREGVRFALQHGARTLIADEMGLGKTLQAIAVASCLHDAWPVL 255
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
+++PSSLRLHWA+MIQ WLNIP +I+VVL Q GGSN++G+ +V SNTK + LDG+FN+
Sbjct: 256 VISPSSLRLHWASMIQHWLNIPTEDILVVLPQTGGSNKAGYRLVYSNTKGDFNLDGVFNV 315
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
ISYDVV K++++L+ +FKIVIADESHFLKNAQAKRT +LP+++KA+Y +LLSGTPALS
Sbjct: 316 ISYDVVPKIKDMLLDLDFKIVIADESHFLKNAQAKRTMHSLPVLQKAKYVVLLSGTPALS 375
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKK 400
RPIELF QL+ALYP VYKNV+EYGNRYCKGG FG+YQGASNHEELHNLMKATVMIRRLKK
Sbjct: 376 RPIELFTQLQALYPTVYKNVNEYGNRYCKGGFFGLYQGASNHEELHNLMKATVMIRRLKK 435
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLI 460
DVL+QLPVKRRQQ FLD++EK+MR I ALF ELE VK KI++C S+E + SLKF +KNLI
Sbjct: 436 DVLSQLPVKRRQQAFLDLSEKEMRHIRALFHELETVKIKIQSCDSQETMDSLKFAQKNLI 495
Query: 461 NKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
NKIY DSAEAKIPAVLDYL T+IEA CKFLIFAHHQ ML+AIHQ LKKKV CIRIDG T
Sbjct: 496 NKIYNDSAEAKIPAVLDYLGTIIEAECKFLIFAHHQSMLEAIHQHLLKKKVKCIRIDGQT 555
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P RQ LVT+FQ KDD+KAAVLS+KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH
Sbjct: 556 PVPVRQTLVTDFQNKDDIKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 615
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQK 640
RIGQVSSVN+YYLLANDTVDDI+WDVV+ KLENLGQ+LDG E +L+VS S R SP+KQK
Sbjct: 616 RIGQVSSVNIYYLLANDTVDDIIWDVVQGKLENLGQMLDGQEKTLDVSQSDTRPSPSKQK 675
Query: 641 TLDSFLKRCNNVDDSEHQQKLK 662
TLD++LKRC+N +++ Q KLK
Sbjct: 676 TLDAYLKRCSNSTEAD-QPKLK 696
>gi|115473589|ref|NP_001060393.1| Os07g0636200 [Oryza sativa Japonica Group]
gi|50508331|dbj|BAD30182.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin a-like [Oryza sativa Japonica Group]
gi|113611929|dbj|BAF22307.1| Os07g0636200 [Oryza sativa Japonica Group]
gi|215697224|dbj|BAG91218.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 747
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/682 (65%), Positives = 537/682 (78%), Gaps = 35/682 (5%)
Query: 10 SAEELDFLEREALQQIAQR-------------------------HSKPFS----DSPSYK 40
SAE+LD LER+A +++A+R H P S +S K
Sbjct: 68 SAEQLDQLERDAYRKLAERKASSSAASTATSPLPSAAYSPVKNSHHHPASRVSQESCFGK 127
Query: 41 VEALPQGSRTLPLSVAPAPKGSLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAF 100
VE+L + P + A S G+ SK +SV FLH++G IAAKF Y LV A
Sbjct: 128 VESLSPSRLSQPNASGNAVNNSQGNMSK-----VSVHLFLHSTGVIAAKFQYHQKLVDAV 182
Query: 101 RKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLR 160
KIPKA+WN KER+W FP LS AE+VLS + G VE++ L PLV+RA+ ++ A DLR
Sbjct: 183 HKIPKASWNGKERVWMFPHSSLSVAEEVLSTVPGIAVEVQKLDPLVKRALTASLYAGDLR 242
Query: 161 EKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
+ Y +IP +ESKL+PFQR+GVRFALQHG R L+ADEMGLGKT+QAIAVA+C D WPVL
Sbjct: 243 DLYGKIPTDVESKLMPFQREGVRFALQHGARTLIADEMGLGKTLQAIAVASCLHDAWPVL 302
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
+++PSSLRLHWA+MIQ WLNIP +I+VVL Q GGSN++G+ +V SNTK + LDG+FN+
Sbjct: 303 VISPSSLRLHWASMIQHWLNIPTEDILVVLPQTGGSNKAGYRLVYSNTKGDFNLDGVFNV 362
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
ISYDVV K++++L+ +FKIVIADESHFLKNAQAKRT +LP+++KA+Y +LLSGTPALS
Sbjct: 363 ISYDVVPKIKDMLLDLDFKIVIADESHFLKNAQAKRTMHSLPVLQKAKYVVLLSGTPALS 422
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKK 400
RPIELF QL+ALYP VYKNV+EYGNRYCKGG FG+YQGASNHEELHNLMKATVMIRRLKK
Sbjct: 423 RPIELFTQLQALYPTVYKNVNEYGNRYCKGGFFGLYQGASNHEELHNLMKATVMIRRLKK 482
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLI 460
DVL+QLPVKRRQQ FLD++EK+MR I ALF ELE VK KI++C S+E + SLKF +KNLI
Sbjct: 483 DVLSQLPVKRRQQAFLDLSEKEMRHIRALFHELETVKIKIQSCDSQETMDSLKFAQKNLI 542
Query: 461 NKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
NKIY DSAEAKIPAVLDYL T+IEA CKFLIFAHHQ ML+AIHQ LKKKV CIRIDG T
Sbjct: 543 NKIYNDSAEAKIPAVLDYLGTIIEAECKFLIFAHHQSMLEAIHQHLLKKKVKCIRIDGQT 602
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P RQ LVT+FQ KDD+KAAVLS+KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH
Sbjct: 603 PVPVRQTLVTDFQNKDDIKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 662
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQK 640
RIGQVSSVN+YYLLANDTVDDI+WDVV+ KLENLGQ+LDG E +L+VS S R SP+KQK
Sbjct: 663 RIGQVSSVNIYYLLANDTVDDIIWDVVQGKLENLGQMLDGQEKTLDVSQSDTRPSPSKQK 722
Query: 641 TLDSFLKRCNNVDDSEHQQKLK 662
TLD++LKRC+N +++ Q KLK
Sbjct: 723 TLDAYLKRCSNSTEAD-QPKLK 743
>gi|222637530|gb|EEE67662.1| hypothetical protein OsJ_25277 [Oryza sativa Japonica Group]
Length = 716
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/693 (64%), Positives = 538/693 (77%), Gaps = 41/693 (5%)
Query: 10 SAEELDFLEREALQQIAQRHSKPFSDS------------------PSYKVEALP-----Q 46
SAE+LD LER+A +++A+R + + S P ++ P Q
Sbjct: 21 SAEQLDQLERDAYRKLAERKASSSAASNRHFAAPLRGLLAGQEQPPPPGIQGFPGVLLRQ 80
Query: 47 GSRTLPLSVA-----------------PAPKGSLGDFSKEQVPKLSVKFFLHTSGNIAAK 89
S ++A P G+ + S+ + K+SV FLH++G IAAK
Sbjct: 81 ASVNCSTTLAQSLYTVVESLSPSRLSQPNASGNAVNNSQGNMSKVSVHLFLHSTGVIAAK 140
Query: 90 FTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRA 149
F Y LV A KIPKA+WN KER+W FP LS AE+VLS + G VE++ L PLV+RA
Sbjct: 141 FQYHQKLVDAVHKIPKASWNGKERVWMFPHSSLSVAEEVLSTVPGIAVEVQKLDPLVKRA 200
Query: 150 IASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAV 209
+ ++ A DLR+ Y +IP +ESKL+PFQR+GVRFALQHG R L+ADEMGLGKT+QAIAV
Sbjct: 201 LTASLYAGDLRDLYGKIPTDVESKLMPFQREGVRFALQHGARTLIADEMGLGKTLQAIAV 260
Query: 210 ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTK 269
A+C D WPVL+++PSSLRLHWA+MIQ WLNIP +I+VVL Q GGSN++G+ +V SNTK
Sbjct: 261 ASCLHDAWPVLVISPSSLRLHWASMIQHWLNIPTEDILVVLPQTGGSNKAGYRLVYSNTK 320
Query: 270 RNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQY 329
+ LDG+FN+ISYDVV K++++L+ +FKIVIADESHFLKNAQAKRT +LP+++KA+Y
Sbjct: 321 GDFNLDGVFNVISYDVVPKIKDMLLDLDFKIVIADESHFLKNAQAKRTMHSLPVLQKAKY 380
Query: 330 ALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLM 389
+LLSGTPALSRPIELF QL+ALYP VYKNV+EYGNRYCKGG FG+YQGASNHEELHNLM
Sbjct: 381 VVLLSGTPALSRPIELFTQLQALYPTVYKNVNEYGNRYCKGGFFGLYQGASNHEELHNLM 440
Query: 390 KATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEV 449
KATVMIRRLKKDVL+QLPVKRRQQ FLD++EK+MR I ALF ELE VK KI++C S+E +
Sbjct: 441 KATVMIRRLKKDVLSQLPVKRRQQAFLDLSEKEMRHIRALFHELETVKIKIQSCDSQETM 500
Query: 450 QSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKK 509
SLKF +KNLINKIY DSAEAKIPAVLDYL T+IEA CKFLIFAHHQ ML+AIHQ LKK
Sbjct: 501 DSLKFAQKNLINKIYNDSAEAKIPAVLDYLGTIIEAECKFLIFAHHQSMLEAIHQHLLKK 560
Query: 510 KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTP 569
KV CIRIDG TP RQ LVT+FQ KDD+KAAVLS+KAGGVGLTLTAASTVIFAELSWTP
Sbjct: 561 KVKCIRIDGQTPVPVRQTLVTDFQNKDDIKAAVLSIKAGGVGLTLTAASTVIFAELSWTP 620
Query: 570 GDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSS 629
GDLIQAEDRAHRIGQVSSVN+YYLLANDTVDDI+WDVV+ KLENLGQ+LDG E +L+VS
Sbjct: 621 GDLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQGKLENLGQMLDGQEKTLDVSQ 680
Query: 630 SQIRSSPAKQKTLDSFLKRCNNVDDSEHQQKLK 662
S R SP+KQKTLD++LKRC+N +++ Q KLK
Sbjct: 681 SDTRPSPSKQKTLDAYLKRCSNSTEAD-QPKLK 712
>gi|414887797|tpg|DAA63811.1| TPA: hypothetical protein ZEAMMB73_058078 [Zea mays]
Length = 705
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/680 (62%), Positives = 524/680 (77%), Gaps = 33/680 (4%)
Query: 9 FSAEELDFLEREALQQIAQRHSK-------PFSDSPSYKVEALPQGSRTLPLSVA----- 56
SAE+LD +ER+A++Q+A+R + P SP LP + T+P +
Sbjct: 21 LSAEQLDQMERDAIRQLAERKASASAASTAPIPASPLGATSPLPSRA-TVPAAAVSSPLG 79
Query: 57 ---PAPKGSL-GDFSKEQV---------------PKLSVKFFLHTSGNIAAKFTYDPVLV 97
PA + SL F K + PK+SV FLH+SG IAA+F Y +LV
Sbjct: 80 GNHPATRASLEARFGKVEALSPSRNAVNNSQGSSPKISVHLFLHSSGMIAARFPYSQLLV 139
Query: 98 SAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAP 157
AFRKIPKA+WNAKER+W FP L+ E+V + G VE+ L PLVQRA+A+A +
Sbjct: 140 DAFRKIPKASWNAKERVWMFPPSSLAIVEEVPRSVPGLTVEVHKLDPLVQRALAAALRSK 199
Query: 158 DLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW 217
DLR YD+IP H+ESKL+PFQR+G+RF LQHGGR L+ADEMGLGKT+QAIAVA+C RD W
Sbjct: 200 DLRGLYDRIPPHLESKLMPFQREGIRFVLQHGGRALIADEMGLGKTLQAIAVASCLRDAW 259
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
PVL+++PSSLRLHWA+ IQ WLNIP +I+VVL GGS+++GF + SN+K + LDG+
Sbjct: 260 PVLVISPSSLRLHWASAIQSWLNIPVEDILVVLPHTGGSHKAGFRVAYSNSKGDFHLDGV 319
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
FN+ISYDVV K+Q+ L+ +FKIVIADESHF+KN QAKRT A+LP+++KAQY +LLSGTP
Sbjct: 320 FNVISYDVVPKIQSTLLDLDFKIVIADESHFMKNGQAKRTVASLPVLQKAQYVVLLSGTP 379
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRR 397
ALSRPIELF Q++ALYP VYK+V EYGN YCKGG FG+YQGASNHEELHNLMKATVMIRR
Sbjct: 380 ALSRPIELFTQIQALYPTVYKSVSEYGNIYCKGGFFGLYQGASNHEELHNLMKATVMIRR 439
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEK 457
LKKDVL+QLPVKRRQQVFLD++EKD++ + ALF ELE +K KI++ S+E + SL+F +
Sbjct: 440 LKKDVLSQLPVKRRQQVFLDLSEKDVKNVRALFIELETLKVKIESSDSKEMIDSLRFAYQ 499
Query: 458 NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRID 517
N++NKIYTDSA AKIPAVLD+L T+IE GCKFLIFAHHQPM+DAI + LKKKV CI+ID
Sbjct: 500 NIVNKIYTDSAVAKIPAVLDFLGTMIEEGCKFLIFAHHQPMIDAIEKHLLKKKVKCIKID 559
Query: 518 GGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
G TP +RQ LVT+FQ DDVKAAVLS+KAGG G+TLTAASTVIFAELSWTPGD+IQAED
Sbjct: 560 GKTPLTTRQTLVTDFQNNDDVKAAVLSIKAGGYGITLTAASTVIFAELSWTPGDIIQAED 619
Query: 578 RAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPA 637
RAHRIGQVSSVNVYYLL+N T+DD++WDVV+ KLENLGQ+LDG E +LEVS R SP+
Sbjct: 620 RAHRIGQVSSVNVYYLLSNGTIDDLMWDVVQGKLENLGQMLDGQEKTLEVSQRDCRPSPS 679
Query: 638 -KQKTLDSFLKRCNNVDDSE 656
KQKTL FLKR + +E
Sbjct: 680 KKQKTLVGFLKRPSASTSAE 699
>gi|242046444|ref|XP_002461093.1| hypothetical protein SORBIDRAFT_02g040560 [Sorghum bicolor]
gi|241924470|gb|EER97614.1| hypothetical protein SORBIDRAFT_02g040560 [Sorghum bicolor]
Length = 756
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/697 (61%), Positives = 521/697 (74%), Gaps = 47/697 (6%)
Query: 7 WEFSAEELDFLEREALQQIAQRHSK-------PFSDSPSYKVEALPQGSRTLPLSVA--- 56
W SAE+LD +ER+A++Q+A+R + P SP LP + +V+
Sbjct: 19 WGLSAEQLDQMERDAIRQLAERKASASAASTAPVPASPLGATSPLPSRATAPAAAVSSPL 78
Query: 57 ----PAPKGSLG----------------DFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVL 96
PA + SL + S+ PK+SV FLH+SG IAA+F Y+ +L
Sbjct: 79 GGNHPAARASLEARFGTVEALSPSRNAVNNSQGSSPKISVHLFLHSSGMIAARFPYNQLL 138
Query: 97 VSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAA 156
V AFR+ PKA+WNAKER+W FP L+ E +SG VE+ L PLVQRA+ +A +
Sbjct: 139 VDAFRRTPKASWNAKERVWMFPPSSLAIVEDFPRSVSGLAVEVHKLDPLVQRALDAALRS 198
Query: 157 PDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDV 216
DLR YD+IP ++ES+L+PFQR+G+ F LQHGGR L+ADEMGLGKT+QAIAVA+C RD
Sbjct: 199 KDLRGLYDRIPPNLESQLMPFQREGIGFVLQHGGRALIADEMGLGKTVQAIAVASCLRDA 258
Query: 217 WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDG 276
WPVL+++PSSLRLHWA IQ WLNIP +I+VVL GGS+++GF +V SNTK + LDG
Sbjct: 259 WPVLVISPSSLRLHWATAIQSWLNIPMEDILVVLPHTGGSHKAGFRVVYSNTKGDFHLDG 318
Query: 277 LFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
+FN+ISYDVV K+Q+ L+ +FKIVIADESHF+KN QAKRT A+LP+++KAQY +LLSGT
Sbjct: 319 VFNVISYDVVPKIQSTLLDLDFKIVIADESHFMKNGQAKRTVASLPVLQKAQYVVLLSGT 378
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIR 396
PALSRPIELF Q++ALYP VYKNV+EYGNRYCKGG FG+YQGASNHEELHNLMKATVMIR
Sbjct: 379 PALSRPIELFTQMQALYPTVYKNVNEYGNRYCKGGFFGLYQGASNHEELHNLMKATVMIR 438
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTE 456
RLKKDVL+QLPVKRRQQVFLD++EKD++ + ALF ELE +K KI++ S+E + SL+F
Sbjct: 439 RLKKDVLSQLPVKRRQQVFLDLSEKDVKNVRALFIELETLKIKIESSDSKETIDSLRFAY 498
Query: 457 KNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRI 516
+N++NKIYTDSA AKIPAVLD+L T+IEAGCKFLIFAHHQPM+DAI Q KKKV CI+I
Sbjct: 499 QNIVNKIYTDSAVAKIPAVLDFLGTMIEAGCKFLIFAHHQPMIDAIEQHLSKKKVKCIKI 558
Query: 517 DGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAE 576
DG TP +RQ LVT FQE DD+KAAVLS+KAGG G+TLTAASTVIFAELSWTPGD+IQAE
Sbjct: 559 DGKTPLTTRQTLVTSFQENDDIKAAVLSIKAGGYGITLTAASTVIFAELSWTPGDIIQAE 618
Query: 577 DRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSP 636
DRAHRIGQVSSVNVYYLLAN T DD++WD V+ KLENLGQ+LDG E +L+VS R SP
Sbjct: 619 DRAHRIGQVSSVNVYYLLANGTADDLMWDSVQGKLENLGQMLDGQEKTLDVSQIDSRPSP 678
Query: 637 AK-----------------QKTLDSFLKRCNNVDDSE 656
+K QKTLD FLKR N E
Sbjct: 679 SKSKQQKTLDGLGPSPSKQQKTLDGFLKRPNTSTSME 715
>gi|414887794|tpg|DAA63808.1| TPA: hypothetical protein ZEAMMB73_058078 [Zea mays]
Length = 692
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/680 (61%), Positives = 511/680 (75%), Gaps = 46/680 (6%)
Query: 9 FSAEELDFLEREALQQIAQRHSK-------PFSDSPSYKVEALPQGSRTLPLSVA----- 56
SAE+LD +ER+A++Q+A+R + P SP LP + T+P +
Sbjct: 21 LSAEQLDQMERDAIRQLAERKASASAASTAPIPASPLGATSPLPSRA-TVPAAAVSSPLG 79
Query: 57 ---PAPKGSL-GDFSKEQV---------------PKLSVKFFLHTSGNIAAKFTYDPVLV 97
PA + SL F K + PK+SV FLH+SG IAA+F Y +LV
Sbjct: 80 GNHPATRASLEARFGKVEALSPSRNAVNNSQGSSPKISVHLFLHSSGMIAARFPYSQLLV 139
Query: 98 SAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAP 157
AFRKIPKA+WNAKER+W FP L+ E+V + G VE+ L PLVQRA+A+A +
Sbjct: 140 DAFRKIPKASWNAKERVWMFPPSSLAIVEEVPRSVPGLTVEVHKLDPLVQRALAAALRSK 199
Query: 158 DLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW 217
DLR YD+IP H+ESKL+PFQR+G+RF LQHGGR L+ADEMGLGKT+QAIAVA+C RD W
Sbjct: 200 DLRGLYDRIPPHLESKLMPFQREGIRFVLQHGGRALIADEMGLGKTLQAIAVASCLRDAW 259
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
PVL IQ WLNIP +I+VVL GGS+++GF + SN+K + LDG+
Sbjct: 260 PVL-------------AIQSWLNIPVEDILVVLPHTGGSHKAGFRVAYSNSKGDFHLDGV 306
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
FN+ISYDVV K+Q+ L+ +FKIVIADESHF+KN QAKRT A+LP+++KAQY +LLSGTP
Sbjct: 307 FNVISYDVVPKIQSTLLDLDFKIVIADESHFMKNGQAKRTVASLPVLQKAQYVVLLSGTP 366
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRR 397
ALSRPIELF Q++ALYP VYK+V EYGN YCKGG FG+YQGASNHEELHNLMKATVMIRR
Sbjct: 367 ALSRPIELFTQIQALYPTVYKSVSEYGNIYCKGGFFGLYQGASNHEELHNLMKATVMIRR 426
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEK 457
LKKDVL+QLPVKRRQQVFLD++EKD++ + ALF ELE +K KI++ S+E + SL+F +
Sbjct: 427 LKKDVLSQLPVKRRQQVFLDLSEKDVKNVRALFIELETLKVKIESSDSKEMIDSLRFAYQ 486
Query: 458 NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRID 517
N++NKIYTDSA AKIPAVLD+L T+IE GCKFLIFAHHQPM+DAI + LKKKV CI+ID
Sbjct: 487 NIVNKIYTDSAVAKIPAVLDFLGTMIEEGCKFLIFAHHQPMIDAIEKHLLKKKVKCIKID 546
Query: 518 GGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
G TP +RQ LVT+FQ DDVKAAVLS+KAGG G+TLTAASTVIFAELSWTPGD+IQAED
Sbjct: 547 GKTPLTTRQTLVTDFQNNDDVKAAVLSIKAGGYGITLTAASTVIFAELSWTPGDIIQAED 606
Query: 578 RAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPA 637
RAHRIGQVSSVNVYYLL+N T+DD++WDVV+ KLENLGQ+LDG E +LEVS R SP+
Sbjct: 607 RAHRIGQVSSVNVYYLLSNGTIDDLMWDVVQGKLENLGQMLDGQEKTLEVSQRDCRPSPS 666
Query: 638 -KQKTLDSFLKRCNNVDDSE 656
KQKTL FLKR + +E
Sbjct: 667 KKQKTLVGFLKRPSASTSAE 686
>gi|168046653|ref|XP_001775787.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162672794|gb|EDQ59326.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 657
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/653 (59%), Positives = 491/653 (75%), Gaps = 30/653 (4%)
Query: 4 DDEWEFSAEELDFLEREALQQIA--QRHSKPFSDSP---SY-----KVEALPQGSRTLPL 53
DDEW S EELD LE A +Q+A QR S S SP SY + A + + +
Sbjct: 3 DDEWGLSMEELDSLENNAKKQLAERQRSSSTASVSPPRYSYHGQQQQRSAFASPRKQIKM 62
Query: 54 SV------------------APAPKGSLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPV 95
V PAP S VPK +K +LH SG+IAAKF Y+
Sbjct: 63 QVDRLCCFLRYDLKFSQSEREPAPSSSQTKSESVNVPKALIKLYLHHSGDIAAKFEYNAK 122
Query: 96 LVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASA 155
+V+A R +P+A WN KERLW FP+ +S AEK++S IS +V +E L PLV+RAI +A+A
Sbjct: 123 IVAAMRTVPRAEWNPKERLWLFPISSVSEAEKIMSNISDLDVSVEGLEPLVRRAIEAAAA 182
Query: 156 APDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRD 215
P+L EKY+++P H+E+KLLPFQRDGVRFALQ G R+++ADEMGLGKT+QAIAV +C +
Sbjct: 183 VPNLLEKYNEVPEHLETKLLPFQRDGVRFALQRGCRVMIADEMGLGKTLQAIAVVSCLEE 242
Query: 216 VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
WPVLI+ PSSLRL WA +QQWL+I PS+I V +SQ N+ GF IV+S T+ ++ LD
Sbjct: 243 DWPVLIVVPSSLRLQWAMSLQQWLDIRPSDITVFMSQYSSWNKEGFNIVNSATRGHVKLD 302
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
GLFNI+SYD+V KL + + + FKI+IADE+H+LKNAQAKRT A +P+++KA+YA+LLSG
Sbjct: 303 GLFNIVSYDLVTKLADAISEAQFKIIIADEAHYLKNAQAKRTNACVPLLQKAKYAVLLSG 362
Query: 336 TPALSRPIELFKQLEALYPDVYKN-VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVM 394
TPALSRPIELFKQLEAL P VYKN V EYGNRYC GG FG+YQG+SN +ELH L+K+TVM
Sbjct: 363 TPALSRPIELFKQLEALQPTVYKNGVSEYGNRYCLGGHFGMYQGSSNLQELHALVKSTVM 422
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKF 454
IRRLKKDVL++LP KRRQQVF+ + +K +R + ALF EL +K +K CK E+E + +K+
Sbjct: 423 IRRLKKDVLSELPQKRRQQVFVSLEDKGIRHMKALFHELNEIKDAMKLCK-EDEKERMKY 481
Query: 455 TEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
+EK L+NKIYT+SA K+PAV +YL T+I+A CKFL+FAHHQ MLD I QL +KKKV I
Sbjct: 482 SEKQLLNKIYTESAVVKLPAVQEYLTTMIDAECKFLVFAHHQSMLDGIEQLLMKKKVGLI 541
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDGGTP ++RQALVT FQE D++ AAVL ++A GVGLTLTAASTVIFAE+SWTPGDL+Q
Sbjct: 542 RIDGGTPQSARQALVTRFQENDNIIAAVLGIRAAGVGLTLTAASTVIFAEMSWTPGDLVQ 601
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
AEDRAHRIGQ SSVNVYYL A+DT+DDI+WD V++KLENL QVLDG EN+L++
Sbjct: 602 AEDRAHRIGQASSVNVYYLHAHDTIDDIIWDTVQNKLENLSQVLDGQENTLQL 654
>gi|414887796|tpg|DAA63810.1| TPA: hypothetical protein ZEAMMB73_058078 [Zea mays]
Length = 657
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/680 (57%), Positives = 483/680 (71%), Gaps = 81/680 (11%)
Query: 9 FSAEELDFLEREALQQIAQRHSK-------PFSDSPSYKVEALPQGSRTLPLSVA----- 56
SAE+LD +ER+A++Q+A+R + P SP LP + T+P +
Sbjct: 21 LSAEQLDQMERDAIRQLAERKASASAASTAPIPASPLGATSPLPSRA-TVPAAAVSSPLG 79
Query: 57 ---PAPKGSL-GDFSKEQV---------------PKLSVKFFLHTSGNIAAKFTYDPVLV 97
PA + SL F K + PK+SV FLH+SG IAA+F Y +LV
Sbjct: 80 GNHPATRASLEARFGKVEALSPSRNAVNNSQGSSPKISVHLFLHSSGMIAARFPYSQLLV 139
Query: 98 SAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAP 157
AFRKIPKA+WNAKER+W FP L+ E+V + G VE+ L PLVQRA+A+A +
Sbjct: 140 DAFRKIPKASWNAKERVWMFPPSSLAIVEEVPRSVPGLTVEVHKLDPLVQRALAAALRSK 199
Query: 158 DLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW 217
DLR YD+IP H+ESKL+PFQR+G+RF LQHGGR L+ADEMGLGKT+QAIAVA+C RD W
Sbjct: 200 DLRGLYDRIPPHLESKLMPFQREGIRFVLQHGGRALIADEMGLGKTLQAIAVASCLRDAW 259
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
PVL IQ WLNIP +I+VVL GGS+++GF + SN+K + LDG+
Sbjct: 260 PVL-------------AIQSWLNIPVEDILVVLPHTGGSHKAGFRVAYSNSKGDFHLDGV 306
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
FN+ISYDVV K+Q+ L+ +FKIVIADESHF+KN QAKRT A+LP+++KAQY +LLSGTP
Sbjct: 307 FNVISYDVVPKIQSTLLDLDFKIVIADESHFMKNGQAKRTVASLPVLQKAQYVVLLSGTP 366
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRR 397
ALSRPIELF Q++ALYP VYK+V EYGN YCKGG FG+YQGASNHEELHNLMKATVMIRR
Sbjct: 367 ALSRPIELFTQIQALYPTVYKSVSEYGNIYCKGGFFGLYQGASNHEELHNLMKATVMIRR 426
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEK 457
LKKDVL+QLPVKRRQQVFLD++EKD++ + ALF ELE +K KI++ S+E + SL+F +
Sbjct: 427 LKKDVLSQLPVKRRQQVFLDLSEKDVKNVRALFIELETLKVKIESSDSKEMIDSLRFAYQ 486
Query: 458 NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRID 517
N++NKIYTDSA AKIPAVLD+L T+IE GCKFLIFAHHQPM+DAI + L
Sbjct: 487 NIVNKIYTDSAVAKIPAVLDFLGTMIEEGCKFLIFAHHQPMIDAIEKHLL---------- 536
Query: 518 GGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
LS+KAGG G+TLTAASTVIFAELSWTPGD+IQAED
Sbjct: 537 -------------------------LSIKAGGYGITLTAASTVIFAELSWTPGDIIQAED 571
Query: 578 RAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPA 637
RAHRIGQVSSVNVYYLL+N T+DD++WDVV+ KLENLGQ+LDG E +LEVS R SP+
Sbjct: 572 RAHRIGQVSSVNVYYLLSNGTIDDLMWDVVQGKLENLGQMLDGQEKTLEVSQRDCRPSPS 631
Query: 638 -KQKTLDSFLKRCNNVDDSE 656
KQKTL FLKR + +E
Sbjct: 632 KKQKTLVGFLKRPSASTSAE 651
>gi|8778961|gb|AAD49766.2|AC007932_14 Contains similarity to HARP gene from Homo sapiens gb|AF210842. It
contains SNF2 N-terminal PF|00176 and helicase
C-terminal PF|00271 domains [Arabidopsis thaliana]
Length = 592
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/682 (57%), Positives = 458/682 (67%), Gaps = 124/682 (18%)
Query: 3 VDDEWEFSAEELDFLEREALQQI-AQRHSKPFSDSP-SYKVEALPQGSRTLPLSVAPAPK 60
+DD W+ + EE+D +E EALQ+I QR+S S P +V QG+R LP ++AP P
Sbjct: 1 MDDFWDLTVEEMDAIENEALQRINQQRNSSSSSSLPIPNEVHTSSQGARILPSTLAPKPN 60
Query: 61 GSLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVP 120
G SK Q K+SVK LH+SG +AAKF Y+ V+V A RKIPKA WNAKERLWTFP
Sbjct: 61 TDAG--SKPQEQKVSVKILLHSSGVLAAKFPYNQVVVDAVRKIPKAIWNAKERLWTFPHS 118
Query: 121 FLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRD 180
LSSAE +L EIS VEIENL PLVQRAIASAS PDLR Y++IP+HIE KLLPFQR+
Sbjct: 119 SLSSAENILREISSVKVEIENLDPLVQRAIASASRVPDLRHLYEKIPSHIEPKLLPFQRE 178
Query: 181 GVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLN 240
G+ + HGGR+LLADEMGLGKT+QA + C ++ ++ + +
Sbjct: 179 GIEY---HGGRVLLADEMGLGKTLQA---SNCCDNMRSGILAGSDYCTIFITFTLGN--- 229
Query: 241 IPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKI 300
+L Q GGSN+ GFTIVSSNTK I LDG+FNI+SYDVV KL +LM+ +FK+
Sbjct: 230 --------ILPQPGGSNKCGFTIVSSNTKGTIHLDGVFNIVSYDVVTKLDKLLMALDFKV 281
Query: 301 VIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNV 360
VIADESHFLKN QAKRT+A LP+IKKAQYA+LLSGTPALSRPIELFKQLEALYPDVY+N+
Sbjct: 282 VIADESHFLKNGQAKRTSACLPVIKKAQYAILLSGTPALSRPIELFKQLEALYPDVYRNI 341
Query: 361 HEYGNRYCKG---------------GVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
HEYG RYCKG G FG YQGASNH+ELHNLMKATVMIRRLKKDVL +
Sbjct: 342 HEYGGRYCKGVSPLHIEKLPRSSYKGFFGTYQGASNHDELHNLMKATVMIRRLKKDVLTE 401
Query: 406 LPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT 465
LP KRRQQVFLD+A KDM+QI ALF E IYT
Sbjct: 402 LPSKRRQQVFLDLAAKDMKQINALFHE------------------------------IYT 431
Query: 466 DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASR 525
DSA AKIPAVLDYLE VIE
Sbjct: 432 DSAVAKIPAVLDYLENVIE----------------------------------------- 450
Query: 526 QALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQV 585
+KD++KAAVLS++A GVG+TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQV
Sbjct: 451 --------DKDEIKAAVLSIRAAGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIGQV 502
Query: 586 SSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI-------RSSPAK 638
SSVN++YLLANDTVDDI+WDVV+SKL+NLGQ+LDG EN+L+V+SS + R+SP K
Sbjct: 503 SSVNIHYLLANDTVDDIIWDVVQSKLDNLGQMLDGQENALDVASSHMMSSPTKPRNSPTK 562
Query: 639 QKTLDSFLKRCNNVDDS--EHQ 658
Q+TL+ FLKRC +DD EHQ
Sbjct: 563 QQTLEPFLKRCKRLDDDTEEHQ 584
>gi|308080139|ref|NP_001183352.1| uncharacterized protein LOC100501760 [Zea mays]
gi|238010938|gb|ACR36504.1| unknown [Zea mays]
Length = 631
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/566 (60%), Positives = 428/566 (75%), Gaps = 32/566 (5%)
Query: 9 FSAEELDFLEREALQQIAQRHSK-------PFSDSPSYKVEALPQGSRTLPLSVA----- 56
SAE+LD +ER+A++Q+A+R + P SP LP + T+P +
Sbjct: 21 LSAEQLDQMERDAIRQLAERKASASAASTAPIPASPLGATSPLPSRA-TVPAAAVSSPLG 79
Query: 57 ---PAPKGSL-GDFSKEQV---------------PKLSVKFFLHTSGNIAAKFTYDPVLV 97
PA + SL F K + PK+SV FLH+SG IAA+F Y +LV
Sbjct: 80 GNHPATRASLEARFGKVEALSPSRNAVNNSQGSSPKISVHLFLHSSGMIAARFPYSQLLV 139
Query: 98 SAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAP 157
AFRKIPKA+WNAKER+W FP L+ E+V + G VE+ L PLVQRA+A+A +
Sbjct: 140 DAFRKIPKASWNAKERVWMFPPSSLAIVEEVPRSVPGLTVEVHKLDPLVQRALAAALRSK 199
Query: 158 DLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW 217
DLR YD+IP H+ESKL+PFQR+G+RF LQHGGR L+ADEMGLGKT+QAIAVA+C RD W
Sbjct: 200 DLRGLYDRIPPHLESKLMPFQREGIRFVLQHGGRALIADEMGLGKTLQAIAVASCLRDAW 259
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
PVL+++PSSLRLHWA+ IQ WLNIP +I+VVL GGS+++GF + SN+K + LDG+
Sbjct: 260 PVLVISPSSLRLHWASAIQSWLNIPVEDILVVLPHTGGSHKAGFRVAYSNSKGDFHLDGV 319
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
FN+ISYDVV K+Q+ L+ +FKIVIADESHF+KN QAKRT A+LP+++KAQY +LLSGTP
Sbjct: 320 FNVISYDVVPKIQSTLLDLDFKIVIADESHFMKNGQAKRTVASLPVLQKAQYVVLLSGTP 379
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRR 397
ALSRPIELF Q++ALYP VYK+V EYGN YCKGG FG+YQGASNHEELHNLMKATVMIRR
Sbjct: 380 ALSRPIELFTQIQALYPTVYKSVSEYGNIYCKGGFFGLYQGASNHEELHNLMKATVMIRR 439
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEK 457
LKKDVL+QLPVKRRQQVFLD++EKD++ + ALF ELE +K KI++ S+E + SL+F +
Sbjct: 440 LKKDVLSQLPVKRRQQVFLDLSEKDVKNVRALFIELETLKVKIESSDSKEMIDSLRFAYQ 499
Query: 458 NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRID 517
N++NKIYTDSA AKIPAVLD+L T+IE GCKFLIFAHHQPM+DAI + LKKKV CI+ID
Sbjct: 500 NIVNKIYTDSAVAKIPAVLDFLGTMIEEGCKFLIFAHHQPMIDAIEKHLLKKKVKCIKID 559
Query: 518 GGTPPASRQALVTEFQEKDDVKAAVL 543
G TP +RQ LVT+FQ DDVKAAV+
Sbjct: 560 GKTPLTTRQTLVTDFQNNDDVKAAVM 585
>gi|302775146|ref|XP_002970990.1| hypothetical protein SELMODRAFT_171818 [Selaginella moellendorffii]
gi|300160972|gb|EFJ27588.1| hypothetical protein SELMODRAFT_171818 [Selaginella moellendorffii]
Length = 692
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/647 (53%), Positives = 449/647 (69%), Gaps = 20/647 (3%)
Query: 5 DEWEFSAEELDFLEREALQQIAQRH-SKPFSDSPSYKVEALPQGSRTLPLSVAPAPKGSL 63
+EW+ + EE+D +ER A Q++A R P P A+ RT S +P
Sbjct: 19 EEWDLTTEEMDSMERNAAQELAARRLDSPLKSHPELLARAVE--GRTSQQSPSPPKLPPT 76
Query: 64 GDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLS 123
D + K VK FLH++G IA K L+S + I KA WN +ERLW FP LS
Sbjct: 77 SD----NLSKQFVKLFLHSTGLIAVKCEPSQKLISVLKSISKAFWNYRERLWMFPPCSLS 132
Query: 124 SAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVR 183
AEK +E+ EIE PLV+RA+ DL Y IP H+ES L+PFQ++GV+
Sbjct: 133 EAEKAFAEVP---CEIEAFGPLVRRALDFQRDVSDLIGYYKNIPGHLESSLMPFQQEGVQ 189
Query: 184 FALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPP 243
FAL HGGR L+ADEMGLGK++QAIAV +C RD WPVL++ PSSLR+HWA M++ WL I
Sbjct: 190 FALHHGGRALIADEMGLGKSVQAIAVVSCLRDYWPVLVIVPSSLRIHWATMLKTWLEIRS 249
Query: 244 SEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIA 303
+I +VLSQ GS++ G+TI S K+ + L GLFNIISYD+V KL NFK+VIA
Sbjct: 250 CDITIVLSQGTGSSQ-GYTIAHSQGKKVLQLGGLFNIISYDMVSKLP----VDNFKVVIA 304
Query: 304 DESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEY 363
DESH++KNAQAKRT A +PII+KA+YA+LL+GTPALSRP+ELFKQLEAL P VY + HEY
Sbjct: 305 DESHYIKNAQAKRTNACVPIIQKAKYAVLLTGTPALSRPVELFKQLEALQPSVYSDFHEY 364
Query: 364 GNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDM 423
G RYC G FGIYQGASN EELH L+K+TVMIRRLK DVL++LP K R+QVFL + K
Sbjct: 365 GQRYCSGSHFGIYQGASNREELHALLKSTVMIRRLKNDVLSELPEKCREQVFLSLDMKST 424
Query: 424 RQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVI 483
RQ+ AL EL+ ++ K++ +E E + LK EK LI KIY +SA K+PAV DYL T++
Sbjct: 425 RQLRALINELKSIREKMQN-STESETEKLKREEKVLITKIYAESAVVKVPAVQDYLSTML 483
Query: 484 EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVL 543
E CKFL+FAHH M++ I + KK V IRIDG T P RQ++V +FQ + V+AAVL
Sbjct: 484 ETNCKFLVFAHHHTMVNGIDEHLKKKNVEFIRIDGDTSPVIRQSMVDKFQNNEKVRAAVL 543
Query: 544 SMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIV 603
S++A G+GLTLT+ASTVIFAE++WTPGDLIQAEDRAHRIGQ SSVN+YYL A DT+DD +
Sbjct: 544 SIRAAGLGLTLTSASTVIFAEMTWTPGDLIQAEDRAHRIGQRSSVNIYYLHAPDTIDDFI 603
Query: 604 WDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKRCN 650
W+ + KL NLGQVL+G E ++ V+S +Q+T++++L+ C+
Sbjct: 604 WETIHRKLGNLGQVLNGREETMRVASPLQH----RQRTINNYLRPCS 646
>gi|147865787|emb|CAN81153.1| hypothetical protein VITISV_020819 [Vitis vinifera]
Length = 845
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/531 (68%), Positives = 413/531 (77%), Gaps = 45/531 (8%)
Query: 1 MEVDDEWEFSAEELDFLEREALQQIAQR--------------HS-----KPFSDSPSYKV 41
ME +D W+ SAEELD LER+A +QIA R HS P S KV
Sbjct: 74 METED-WDLSAEELDSLERDAFRQIALRNSSSSTASVSNNSIHSSNPNPNPIIPSLPRKV 132
Query: 42 EALPQGSRTLPLSVAPAPKGSLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFR 101
+ LP GSR P S G+ SKE + KLSVKF LH SGNIAAKF+Y PV+V AFR
Sbjct: 133 DDLPPGSRIPPPSTVVK-----GNCSKE-LHKLSVKFXLHASGNIAAKFSYAPVVVGAFR 186
Query: 102 KIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLRE 161
KI KA+WNAKERLW FP+ LSSAEKVL EI+G NVEIEN+ PLV+RAI +A+A PDLR+
Sbjct: 187 KISKASWNAKERLWMFPLSSLSSAEKVLHEITGINVEIENIDPLVRRAIDAATAVPDLRD 246
Query: 162 KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
+YD+IP++IE+KLLPFQRDG+RF LQHGGR+LLADEMGLGKT+QAIAV TC RD WPVL+
Sbjct: 247 RYDRIPSYIETKLLPFQRDGIRFVLQHGGRVLLADEMGLGKTLQAIAVTTCVRDSWPVLV 306
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
LTPSSLRLHWA+ VVLSQ GSNR GF IV SNTK I LDG+FNII
Sbjct: 307 LTPSSLRLHWAS--------------VVLSQWSGSNRGGFRIVPSNTKGTIHLDGVFNII 352
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSR 341
SYDVVLKLQ IL S FK+VIADESHFLKNAQAKRT+A+LP+++KAQY +LLSGTPALSR
Sbjct: 353 SYDVVLKLQKILAESEFKVVIADESHFLKNAQAKRTSASLPVLQKAQYTILLSGTPALSR 412
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKD 401
PIELFKQLEALYPDVY+NVHEYGNRYCKGGVFG+YQGASNHEELHNLMKATV+IRRLKKD
Sbjct: 413 PIELFKQLEALYPDVYRNVHEYGNRYCKGGVFGMYQGASNHEELHNLMKATVLIRRLKKD 472
Query: 402 VLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLIN 461
VL++LPVKRRQQVFLD+ EKDM+QI ALFRELEVVK KIKA KS+EE +SLKF+EKNLIN
Sbjct: 473 VLSELPVKRRQQVFLDLDEKDMKQINALFRELEVVKSKIKASKSKEEAESLKFSEKNLIN 532
Query: 462 KIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
KIYTDSA+AKIPAVLDYL TV+E I + H Q LK KV+
Sbjct: 533 KIYTDSAQAKIPAVLDYLGTVVED-----IISFHDSARYVFAQCVLKGKVY 578
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/188 (64%), Positives = 139/188 (73%), Gaps = 35/188 (18%)
Query: 476 LDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEK 535
L +L+ AGCKFLIFAHHQPM+D+I Q
Sbjct: 690 LMFLKLTYMAGCKFLIFAHHQPMIDSIFQFL----------------------------- 720
Query: 536 DDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLA 595
VLS+KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDR HRIGQVSSVN++YLLA
Sbjct: 721 ------VLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRVHRIGQVSSVNIHYLLA 774
Query: 596 NDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKRCNNVDDS 655
NDTVDDI+WDVV+SKLENLGQ+LDGHEN+LEVS SQ RSSP+KQ+T+DSF+KRCNNVD+
Sbjct: 775 NDTVDDIIWDVVQSKLENLGQMLDGHENTLEVSVSQPRSSPSKQRTIDSFMKRCNNVDNP 834
Query: 656 EHQQKLKY 663
EHQ LK+
Sbjct: 835 EHQPNLKH 842
>gi|414887795|tpg|DAA63809.1| TPA: hypothetical protein ZEAMMB73_058078 [Zea mays]
Length = 618
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/566 (59%), Positives = 415/566 (73%), Gaps = 45/566 (7%)
Query: 9 FSAEELDFLEREALQQIAQRHSK-------PFSDSPSYKVEALPQGSRTLPLSVA----- 56
SAE+LD +ER+A++Q+A+R + P SP LP + T+P +
Sbjct: 21 LSAEQLDQMERDAIRQLAERKASASAASTAPIPASPLGATSPLPSRA-TVPAAAVSSPLG 79
Query: 57 ---PAPKGSL-GDFSKEQV---------------PKLSVKFFLHTSGNIAAKFTYDPVLV 97
PA + SL F K + PK+SV FLH+SG IAA+F Y +LV
Sbjct: 80 GNHPATRASLEARFGKVEALSPSRNAVNNSQGSSPKISVHLFLHSSGMIAARFPYSQLLV 139
Query: 98 SAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAP 157
AFRKIPKA+WNAKER+W FP L+ E+V + G VE+ L PLVQRA+A+A +
Sbjct: 140 DAFRKIPKASWNAKERVWMFPPSSLAIVEEVPRSVPGLTVEVHKLDPLVQRALAAALRSK 199
Query: 158 DLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW 217
DLR YD+IP H+ESKL+PFQR+G+RF LQHGGR L+ADEMGLGKT+QAIAVA+C RD W
Sbjct: 200 DLRGLYDRIPPHLESKLMPFQREGIRFVLQHGGRALIADEMGLGKTLQAIAVASCLRDAW 259
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
PVL IQ WLNIP +I+VVL GGS+++GF + SN+K + LDG+
Sbjct: 260 PVL-------------AIQSWLNIPVEDILVVLPHTGGSHKAGFRVAYSNSKGDFHLDGV 306
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
FN+ISYDVV K+Q+ L+ +FKIVIADESHF+KN QAKRT A+LP+++KAQY +LLSGTP
Sbjct: 307 FNVISYDVVPKIQSTLLDLDFKIVIADESHFMKNGQAKRTVASLPVLQKAQYVVLLSGTP 366
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRR 397
ALSRPIELF Q++ALYP VYK+V EYGN YCKGG FG+YQGASNHEELHNLMKATVMIRR
Sbjct: 367 ALSRPIELFTQIQALYPTVYKSVSEYGNIYCKGGFFGLYQGASNHEELHNLMKATVMIRR 426
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEK 457
LKKDVL+QLPVKRRQQVFLD++EKD++ + ALF ELE +K KI++ S+E + SL+F +
Sbjct: 427 LKKDVLSQLPVKRRQQVFLDLSEKDVKNVRALFIELETLKVKIESSDSKEMIDSLRFAYQ 486
Query: 458 NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRID 517
N++NKIYTDSA AKIPAVLD+L T+IE GCKFLIFAHHQPM+DAI + LKKKV CI+ID
Sbjct: 487 NIVNKIYTDSAVAKIPAVLDFLGTMIEEGCKFLIFAHHQPMIDAIEKHLLKKKVKCIKID 546
Query: 518 GGTPPASRQALVTEFQEKDDVKAAVL 543
G TP +RQ LVT+FQ DDVKAAV+
Sbjct: 547 GKTPLTTRQTLVTDFQNNDDVKAAVM 572
>gi|302757351|ref|XP_002962099.1| hypothetical protein SELMODRAFT_76516 [Selaginella moellendorffii]
gi|300170758|gb|EFJ37359.1| hypothetical protein SELMODRAFT_76516 [Selaginella moellendorffii]
Length = 616
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/601 (55%), Positives = 421/601 (70%), Gaps = 15/601 (2%)
Query: 5 DEWEFSAEELDFLEREALQQIAQRH-SKPFSDSPSYKVEALPQGSRTLPLSVAPAPKGSL 63
+EW+ + EE+D +ER A Q++A R P P A+ RT S +P
Sbjct: 19 EEWDLTTEEMDSMERNAAQELAARRLDSPLKSHPELLARAVE--GRTSQQSPSPPKLPPT 76
Query: 64 GDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLS 123
D + K VK FLH++G IA K L+S + I KA WN +ERLW FP LS
Sbjct: 77 SD----NLSKQFVKLFLHSTGLIAVKCEPSQKLISVLKSISKAFWNYRERLWMFPPCSLS 132
Query: 124 SAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVR 183
AEK +E+ EIE PLV+RA+ DL Y IP H+ES L+PFQ++GV+
Sbjct: 133 DAEKAFAEVP---CEIEAFGPLVRRALDFQRDVSDLIGYYKNIPGHLESSLMPFQQEGVQ 189
Query: 184 FALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPP 243
FAL HGGR L+ADEMGLGK++QAIAV +C RD WPVL++ PSSLR+HWA M++ WL I
Sbjct: 190 FALHHGGRALIADEMGLGKSVQAIAVVSCLRDYWPVLVIVPSSLRIHWATMLKTWLEIRS 249
Query: 244 SEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIA 303
+I +VLSQ GS++ G+TI S K+ + L GLFNIISYD+V KL + +NFK+VIA
Sbjct: 250 CDITIVLSQGTGSSQ-GYTIAHSQGKKVLQLGGLFNIISYDMVSKLP---VDNNFKVVIA 305
Query: 304 DESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEY 363
DESH++KNAQAKRT A +PII+KA+YA+LL+GTPALSRP+ELFKQLEAL P VY + HEY
Sbjct: 306 DESHYIKNAQAKRTNACVPIIQKAKYAVLLTGTPALSRPVELFKQLEALQPSVYSDFHEY 365
Query: 364 GNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDM 423
G RYC G FGIYQGASN EELH L+K+TVMIRRLK DVL++LP K R+QVFL + K
Sbjct: 366 GQRYCSGSHFGIYQGASNREELHALLKSTVMIRRLKNDVLSELPEKCREQVFLSLDMKST 425
Query: 424 RQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVI 483
RQ+ AL EL+ ++ K++ +E E + LK EK LI KIY +SA K+PAV DYL T++
Sbjct: 426 RQLRALINELKSIREKMQN-STESETEKLKREEKVLITKIYAESAVVKVPAVQDYLSTML 484
Query: 484 EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVL 543
E CKFL+FAHH M++ I + KK V IRIDG T P RQ++V +FQ + V+AAVL
Sbjct: 485 ETNCKFLVFAHHHTMVNGIDEHLKKKNVEFIRIDGDTSPVIRQSMVDKFQNNEKVRAAVL 544
Query: 544 SMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIV 603
S++A G+GLTLT+ASTVIFAE+SWTPGDLIQAEDRAHRIGQ SSVN+YYL A DT+DD +
Sbjct: 545 SIRAAGLGLTLTSASTVIFAEMSWTPGDLIQAEDRAHRIGQRSSVNIYYLHAPDTIDDFI 604
Query: 604 W 604
W
Sbjct: 605 W 605
>gi|307136203|gb|ADN34041.1| chromatin remodelling complex ATPase chain isw-1 [Cucumis melo
subsp. melo]
Length = 385
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 282/374 (75%), Positives = 320/374 (85%), Gaps = 29/374 (7%)
Query: 296 SNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPD 355
+++VIADESHF+KNAQAKRT A +P+I+KAQYA+LLSGTPALSRPIEL KQLEALYP+
Sbjct: 36 GTYQVVIADESHFMKNAQAKRTVACVPVIQKAQYAILLSGTPALSRPIELLKQLEALYPN 95
Query: 356 VYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVF 415
VYKNVHEYGNRYCKGG FG+YQGASNH ELHNLMKAT+MIRRLKKDVL++LP+KRRQQVF
Sbjct: 96 VYKNVHEYGNRYCKGGTFGLYQGASNHVELHNLMKATLMIRRLKKDVLSELPLKRRQQVF 155
Query: 416 LDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAV 475
LD+AEKD+R+I ALF ELEVVKGKIKAC+S EEV+SLKF +KNLINKIYTDSAEAKIPAV
Sbjct: 156 LDLAEKDIREIRALFCELEVVKGKIKACRS-EEVESLKFQQKNLINKIYTDSAEAKIPAV 214
Query: 476 LDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEK 535
L+YLETVIE KKKV+CIRIDGGTPPA RQALV++FQ+K
Sbjct: 215 LNYLETVIE-----------------------KKKVNCIRIDGGTPPAMRQALVSDFQQK 251
Query: 536 DDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLA 595
D + AAVLS+KAGGVGLTLTAASTVIF ELSWTPGDLIQAEDRAHRIGQVSSVN++YLLA
Sbjct: 252 DSIMAAVLSIKAGGVGLTLTAASTVIFTELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLA 311
Query: 596 NDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ---IRSSP-AKQKTLDSFLKRCNN 651
NDTVDDI+WDVV+SKLENLGQ+LDG EN+LEV+ Q SSP +KQKTLDSF+KRCNN
Sbjct: 312 NDTVDDIIWDVVQSKLENLGQMLDGEENTLEVAVKQQPITSSSPNSKQKTLDSFIKRCNN 371
Query: 652 VDDSEHQQKLKYRK 665
++ Q KLK K
Sbjct: 372 A-SADTQSKLKLPK 384
>gi|255087256|ref|XP_002505551.1| SNF2 super family [Micromonas sp. RCC299]
gi|226520821|gb|ACO66809.1| SNF2 super family [Micromonas sp. RCC299]
Length = 700
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/573 (43%), Positives = 360/573 (62%), Gaps = 31/573 (5%)
Query: 74 LSVKFFLHTSGN---IAAKFTYDPVLVSAFRKIPKATW--NAKERLWTFPVPFLSSAEKV 128
L+V+ L G + + YD + + R IP A++ NA R WT P ++ +
Sbjct: 63 LTVELILEKHGGRVAVVCRQGYDEAVAAVCRSIPGASYDGNAYPRRWTVPESAVTDVSRA 122
Query: 129 LSEISGYNVEIENLHPLVQRAIASASAAPDLREK-YDQIPAHIESKLLPFQRDGVRFALQ 187
L VE+ P+V RA+A+ + E+ Y ++P + +++ PFQ +GV++ L
Sbjct: 123 LKSARDVTVEVIAPVPMVLRALANMTPLERAVERAYARVPESLRTRMFPFQIEGVKYGLS 182
Query: 188 HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIV 247
GGR+L+ D+MGLGKT+QA+A+ +C+R+ WP LIL P+SLR W +++WL++ P I
Sbjct: 183 RGGRVLIGDQMGLGKTVQALALISCYREEWPCLILVPTSLRDAWHEALRRWLDVRPGLIA 242
Query: 248 VVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESH 307
V GS I ++ F I+ Y +V K+Q L + NF++V+ DESH
Sbjct: 243 SV-----GSGAEAHKINAAT----------FAIVPYSLVGKMQGKLAARNFQVVVCDESH 287
Query: 308 FLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRY 367
F+K+A+A+RT A +P++K A+ A+ L+GTPALSRP+EL+ Q+EAL P+V+ E+ RY
Sbjct: 288 FIKDAKAQRTKAVVPLLKAARRAICLTGTPALSRPVELYSQVEALRPNVFTKFTEFAQRY 347
Query: 368 CKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVF--LDVAEKDMRQ 425
C G FG +QG N +EL+ ++ VM+RRLK+DVL QLP KRR+QV+ LD + R+
Sbjct: 348 CSGSRFG-WQGCENPDELYAIISRLVMVRRLKRDVLTQLPPKRREQVYIALDKKTEAYRE 406
Query: 426 IYALFRELEVVKGKIK---ACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETV 482
+ A+ +L+ ++ K + EK L+N Y SA+AK +V DYLET+
Sbjct: 407 MKAVQEQLQRLRDHAKDNGLLLGAGGDGKMNVEEKRLMNAYYVASAKAKATSVQDYLETL 466
Query: 483 IE---AGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
++ AG KFL FAHH+ +LDA + K+K IRIDG TP R LV +FQ D +K
Sbjct: 467 LDGSGAGDKFLFFAHHKELLDAASTVLRKRKTQFIRIDGTTPTTERGGLVQQFQTVDAIK 526
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
AVLS+KA G+GLTLTAASTV+F ELSWTPGD++QAEDRAHRIGQ SSV V +L A ++V
Sbjct: 527 VAVLSIKAAGMGLTLTAASTVVFGELSWTPGDIVQAEDRAHRIGQASSVLVQFLHAKNSV 586
Query: 600 DDIVWDVVRSKLENLGQVLDGH-ENSLEVSSSQ 631
DD++W V++KLENLGQVLDGH + LE+ Q
Sbjct: 587 DDVMWGSVQNKLENLGQVLDGHMGDHLEIHDDQ 619
>gi|303288742|ref|XP_003063659.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454727|gb|EEH52032.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 518
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/546 (44%), Positives = 337/546 (61%), Gaps = 48/546 (8%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIA 151
+D ++V+A +++P ++A R W FP L A L G +E+ P+VQRA+A
Sbjct: 1 FDELVVAAIKRVPGREYDAATRRWNFPESHLKDAAAALKSAPGVCIEVVMPVPIVQRALA 60
Query: 152 SAS-------------------AAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRI 192
+ + Y++IP + + PFQR+GV+F L GGR+
Sbjct: 61 VMTQLERAAAAAAATLDGGGDLGDLGVEAAYERIPETLRDAMFPFQREGVKFGLARGGRV 120
Query: 193 LLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQ 252
L+ D+MGLGKTIQA+A+ +C+ + WP L+L P+SLR W + +++WL + PS I V S
Sbjct: 121 LIGDQMGLGKTIQALALVSCYPEDWPCLVLVPTSLRDAWESALRRWLGVRPSLIAAVASG 180
Query: 253 LGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA 312
G+ +G F I+ Y +V KL L ++IV+ DESHFLK+
Sbjct: 181 ADGNKING---------------AAFAIVPYSLVGKLGEKLARKKYQIVVCDESHFLKDG 225
Query: 313 QAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV 372
+A+RT A +P+IK A+ A+ L+GTPALSRPIEL+ QLEAL P+V+ +E+ RYC G
Sbjct: 226 KAQRTKAVVPLIKAARRAICLTGTPALSRPIELYTQLEALRPNVFTKFNEFAQRYCSGSR 285
Query: 373 FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE 432
FG +QG +N +EL ++ VM+RRLKKDVL QLP K R+QVFL + + + E
Sbjct: 286 FG-WQGCTNADELFGVISRLVMVRRLKKDVLTQLPPKTREQVFLPLPKSEA------LSE 338
Query: 433 LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLI 491
++ ++ ++ K E L+N++Y SA+AKI V +YLET+I+ G KFL
Sbjct: 339 VKAIRERLNDIKESNR------DEGRLMNQLYVASAKAKIGPVQEYLETLIDGGADKFLF 392
Query: 492 FAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVG 551
FAHH +LDA K+K+ IRIDG TP +R LV FQ D V+ AVLS+KA GVG
Sbjct: 393 FAHHAELLDAAAATLKKRKIQHIRIDGSTPSTARGKLVETFQTVDAVRVAVLSIKAAGVG 452
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
LTLTAAS VIF ELSWTPG+++QAEDRAHRIGQV+SV+V +L A +TVDDI+W V++KL
Sbjct: 453 LTLTAASAVIFGELSWTPGEIVQAEDRAHRIGQVNSVSVQFLCARNTVDDIMWGSVQNKL 512
Query: 612 ENLGQV 617
ENLGQV
Sbjct: 513 ENLGQV 518
>gi|145356928|ref|XP_001422675.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582918|gb|ABP00992.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 638
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/482 (48%), Positives = 318/482 (65%), Gaps = 35/482 (7%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
+P +++K+ FQR GV +AL+ GR+L+ DEMGLGKT+QA A+ C+R+ P LIL P+
Sbjct: 149 VPKALDAKMFEFQRTGVMYALRRRGRVLIGDEMGLGKTVQACALLACYREECPALILVPT 208
Query: 226 SLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDV 285
SLR W +Q WL++ ++ V G+ G+ + F+I+ Y +
Sbjct: 209 SLREAWRNALQSWLDVADGDVACV-----GAASEGWKLDEGRP---------FDIVPYSL 254
Query: 286 VLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIEL 345
V+KL++ L++ +KIV+ DESHFLK+ +A+RT A +P++K A A+ L+GTPALSRPIEL
Sbjct: 255 VVKLRSKLLAKRYKIVVCDESHFLKDRRAQRTQAVMPLLKDANRAICLTGTPALSRPIEL 314
Query: 346 FKQLEALYPDVYKNVHEYGNRYC-KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLA 404
F QLEAL P V+ ++EYG RYC GG FG+Y G ++ +ELH ++ M+RRLKKDVL
Sbjct: 315 FTQLEALVPKVFARLNEYGARYCANGGPFGMYTGCTHADELHVMISKLCMVRRLKKDVLK 374
Query: 405 QLPVKRRQQVFLDVAEK---DMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLIN 461
LP K+R QV+L + + D+R+I +L EL G + EK L+N
Sbjct: 375 DLPPKQRTQVWLALEKSSMGDVRRIKSLLDELRQRGGN-------------ELEEKRLLN 421
Query: 462 KIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
+++ SA+AK +V +YLET+I+ KFL FAHH +LDA+ Q KKV IRIDG T
Sbjct: 422 ELFLASAKAKTKSVCEYLETLIDGSTSKFLFFAHHGVLLDAVAQCMDAKKVKTIRIDGST 481
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P A R LV FQ +DDV+ A+LS+KA G+GLTLTAASTVIF E+ WTPGDLIQAEDRAH
Sbjct: 482 PAAVRGDLVNAFQRRDDVRVAILSIKAAGMGLTLTAASTVIFGEMVWTPGDLIQAEDRAH 541
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE--NSLEVSSSQIRSSPAK 638
RIGQ SSV V YL A DT+D+I+W ++ KL+NLG VL+G N LE +S+ + SP +
Sbjct: 542 RIGQQSSVLVQYLHAKDTIDEIIWQSIKKKLDNLGAVLNGQTSGNHLETTSTNGK-SPKR 600
Query: 639 QK 640
QK
Sbjct: 601 QK 602
>gi|308811198|ref|XP_003082907.1| SNF2 domain-containing protein / helicase domain-containing protein
(ISS) [Ostreococcus tauri]
gi|116054785|emb|CAL56862.1| SNF2 domain-containing protein / helicase domain-containing protein
(ISS) [Ostreococcus tauri]
Length = 596
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/478 (47%), Positives = 312/478 (65%), Gaps = 31/478 (6%)
Query: 160 REKYD-QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWP 218
R YD ++P +++K+ FQR+GV +AL+ GGR L+ DEMGLGKT+QA A+ C++D P
Sbjct: 70 RAMYDARVPREMDAKMFDFQREGVMYALRRGGRALIGDEMGLGKTVQACALLACYKDECP 129
Query: 219 VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
LIL P+SLR W +Q WL+ +I VV ++N + + ++
Sbjct: 130 ALILVPTSLREAWRNALQSWLDADDGDIAVV--------------GAANEAKKLDEGRMY 175
Query: 279 NIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKK--AQYALLLSGT 336
NI+ Y + +KL++ L +K+++ADESHFLK+ +A+RT A +P++K A + L+GT
Sbjct: 176 NIVPYSLCVKLKDRLRERRYKVIVADESHFLKDRRAQRTQAVMPLMKDGAASRVICLTGT 235
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV-FGIYQGASNHEELHNLMKATVMI 395
PALSRPIELF QLEAL P V+ +H+YG RYC+GG FG+Y G S +ELH ++ M+
Sbjct: 236 PALSRPIELFSQLEALVPRVFFRLHDYGTRYCQGGAPFGMYTGCSRADELHVMISKLCMV 295
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK+DVL LP K+R Q FL V + + + + +L+ ++ E +F
Sbjct: 296 RRLKRDVLKSLPPKQRTQQFLTVEKSCLGDVRRIKTQLDKLR----------EAGGSEFE 345
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEAGC--KFLIFAHHQPMLDAIHQLFLKKKVHC 513
EK L+N+++ SA+AK+ AV DYLET+I+ KF+ FAHH MLDA+ KKK
Sbjct: 346 EKRLLNELFLASAKAKVNAVCDYLETLIDGSASEKFIFFAHHGVMLDAVSAFLEKKKCKH 405
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
IRIDG TP A+R LV +FQ D + AVLS+KA G+GLTLTAASTVIF E+ WTPGDLI
Sbjct: 406 IRIDGSTPSAARGDLVNKFQRDDSTRIAVLSIKAAGMGLTLTAASTVIFGEMVWTPGDLI 465
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE-NSLEVSSS 630
QAEDRAHRIGQ SSV V YL A DT+D+I+W +R KL+ LG VL+G + LE +++
Sbjct: 466 QAEDRAHRIGQASSVLVQYLHARDTIDEIIWQTIRRKLDTLGTVLNGQSGDHLEATTA 523
>gi|428170105|gb|EKX39033.1| hypothetical protein GUITHDRAFT_76774, partial [Guillardia theta
CCMP2712]
Length = 522
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/533 (42%), Positives = 317/533 (59%), Gaps = 45/533 (8%)
Query: 115 WTFPVPFLSSAEKVLSEISGYNV-----EIENLHPLVQRAIASASAAPDL--------RE 161
W FP L K+++EIS N +L P+ + P + +
Sbjct: 11 WVFP---LCQYYKLVNEISRMNATQPANSTFSLTPVPENVFKVLKNDPSVSTLNHTKAKM 67
Query: 162 KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
+ +P I KLLPFQR+GV F L GR+L+ DEMGLGKT+QAIA+A + D WP+LI
Sbjct: 68 LLEALPLTISKKLLPFQREGVLFGLAREGRVLIGDEMGLGKTVQAIAIAAAYLDEWPLLI 127
Query: 222 LTPSSLRLHWAAMIQQWL--NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
+ PSS+R WA + WL + P ++ + S R++ + L
Sbjct: 128 VCPSSMRCMWAQELVNWLPGELTPQDVNTIFS-----------------GRDVVGNQLVT 170
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
IISYD+ K + S FK++I DESH+LKN AKR+ LP I+ A+ ++LL+GTPAL
Sbjct: 171 IISYDLFCKFAPEISSMQFKVIIGDESHYLKNPNAKRSKTILPFIRSARRSILLTGTPAL 230
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIR 396
SRP+ELF L +L+P ++ N E+ RYC G FG+ GASN EELH L+ M+R
Sbjct: 231 SRPVELFNLLNSLHPRLFNNFLEFAYRYCDAHQGPFGLETSGASNLEELHVLLDQHTMVR 290
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT- 455
RLKKDVL QLP KRRQ++ + ++E + ++ E++ +K + + EEE +F
Sbjct: 291 RLKKDVLTQLPAKRRQKILIKISEAESKRFAT---EMDKLKELERVTQDEEEDSEARFRA 347
Query: 456 ---EKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
+K LI K+Y D+ AK+ A+ +Y+ +IE G KFL+FAHH +LD + + KKKV
Sbjct: 348 QSRKKALIMKMYVDTGVAKLQAIQEYVADLIECGAKFLVFAHHMEILDGLEDVVSKKKVQ 407
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG TP RQ V+ FQE V+ A+LS+ A G GLTLTAA+ V+FAEL WTPG L
Sbjct: 408 YIRIDGSTPSRERQLRVSSFQESSSVRVAILSVTAAGTGLTLTAANLVVFAELHWTPGIL 467
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSL 625
+QAEDRAHRIGQ SSVNV YL+ T D+++WD + K++ +G+ LDG S
Sbjct: 468 LQAEDRAHRIGQQSSVNVMYLVGQGTCDELIWDSISYKVKVIGRALDGMRTSF 520
>gi|384249916|gb|EIE23396.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 645
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/588 (40%), Positives = 352/588 (59%), Gaps = 36/588 (6%)
Query: 48 SRTLPLSVAPAPKGSLGDFSKE-QVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKA 106
+R LP S+A P S+G K + P + + + LV+A +++ +
Sbjct: 73 ARALPASMA-GPSASVGGQPKAGEGPVTRAVLKIGPGSCLEVSISNHAGLVAALKQVGEG 131
Query: 107 TWN---AKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKY 163
++ + +W FP+P + K L G +E+LHP+ + + +ASA PD Y
Sbjct: 132 AFSHNAGGQSVWRFPLPKRPAVAKALEAARGVRCSVEDLHPVPRAFLEAASALPDESACY 191
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
+IPA +E +L+ FQRDGVRFAL+HGGR L+ DEMGLGKT+QA+A+ FRD WP LI+
Sbjct: 192 GRIPAKLEGRLMAFQRDGVRFALRHGGRALIGDEMGLGKTVQALALMAAFRDEWPCLIIV 251
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL---FNI 280
PSSLR W + +WL I ++ V +NT+++ L G I
Sbjct: 252 PSSLREQWVDALVEWLGITEEQVHV-----------------TNTRKDTDLTGRKYQCLI 294
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
SY+ + L+ +F++VI DE+H++KN ++ R+ P ++KA+ A+LLSGTPA +
Sbjct: 295 ASYNFLGNLEANDRDLDFRVVIMDEAHYIKNKKSGRSQDAKPFVQKAKRAILLSGTPASA 354
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYC-------KGGVF--GIYQGASNHEELHNLMKA 391
RP ELF ++ L P + ++G RYC +G F Y GA+ EEL++++ +
Sbjct: 355 RPRELFPLIDCLLPASKVSFTKFGERYCLTQNHFPRGQSFYSNKYDGATETEELYHVLTS 414
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQS 451
+MIRRLKKDVL+QLP KRR QVFL + + +Q+ A+ +E+ VK + A K++ + S
Sbjct: 415 CIMIRRLKKDVLSQLPPKRRTQVFLQLDAEAKKQLEAMQKEIGAVKAAVAAAKTDASLDS 474
Query: 452 LKF-TEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKK 509
T K I +Y +A+ K+ AV +YL+ ++E K L+FAHH+ MLD I + K
Sbjct: 475 FGGGTVKRTILDLYYRNAKLKVKAVQEYLKELLETTDQKLLVFAHHKDMLDGIEFIMNKT 534
Query: 510 KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTP 569
K +RIDG ++R LV +FQ D++AAVLS++A G GLTLT AS V+FAE +WTP
Sbjct: 535 KQRYMRIDGSVKTSARADLVNDFQNNRDIRAAVLSIQAAGTGLTLTGASVVVFAEYTWTP 594
Query: 570 GDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
GDL+QAEDRAHRIGQ +SVN+Y L A +VDD++W ++SKLE++GQ
Sbjct: 595 GDLVQAEDRAHRIGQATSVNIYMLHARGSVDDVIWAKLQSKLEHVGQA 642
>gi|428176602|gb|EKX45486.1| hypothetical protein GUITHDRAFT_42086, partial [Guillardia theta
CCMP2712]
Length = 472
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/487 (44%), Positives = 314/487 (64%), Gaps = 34/487 (6%)
Query: 158 DLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW 217
D+ E Y +P+ ++S LLPFQRDGVRFAL+ GR+L+ DEMGLGKT+QA+AVA ++ W
Sbjct: 1 DVEEAYSALPSLLKSSLLPFQRDGVRFALKRKGRVLIGDEMGLGKTLQALAVAAAYKREW 60
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
P+LI+ PSSLRL+WA +WL E + V + GS+ + G+
Sbjct: 61 PLLIICPSSLRLNWAQECSRWLEGMKEEPLEVQVVMKGSD---------------AIKGV 105
Query: 278 -FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
I+SYD+ ++ + + +S+FK+VIADESH++K +A RT A +P++++A A+LLSGT
Sbjct: 106 DVTIVSYDLATRMSDAIKASSFKVVIADESHYIKTDKALRTRACMPLLRQASRAILLSGT 165
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATV 393
PALSRP+EL QL+ L P ++ + E+ RYC K G +G+ GAS +EL L+ ++V
Sbjct: 166 PALSRPVELLSQLQCLQPKIFSSKREFQRRYCNAKQGRWGLDTSGASCLQELSILLSSSV 225
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIK-------ACKSE 446
MIRRLK++VL +LP KRRQ+VF++VA KD+++I ++ ++ V + A +
Sbjct: 226 MIRRLKREVLVELPAKRRQKVFINVANKDLKKIQSIMNRIDSVDMRPSSSPPAGHAGDEK 285
Query: 447 EEVQSLKFTEK--------NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPM 498
E+V K +LI + Y ++ AK+P V YL +IE GCKFL+FAHH +
Sbjct: 286 EQVGENGGERKRRRGSMLDSLITEAYLETGLAKLPEVCSYLADLIEGGCKFLVFAHHLQV 345
Query: 499 LDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAS 558
LD I + L+ V IRIDG PPA+R V FQE+++V+ VL M A G GLTLT+A+
Sbjct: 346 LDGIERFLLRSSVKYIRIDGSVPPAARAERVKMFQEEEEVRVGVLGMTAAGTGLTLTSAA 405
Query: 559 TVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
TV+FAEL WTPG ++QAEDR HRI Q VN++YLLA T D++VW + SK++ + L
Sbjct: 406 TVVFAELYWTPGVMMQAEDRVHRISQQLPVNIHYLLARGTADELVWSSIVSKVKIVSWAL 465
Query: 619 DGHENSL 625
DG + ++
Sbjct: 466 DGSQQAV 472
>gi|440796019|gb|ELR17128.1| helicase, putative [Acanthamoeba castellanii str. Neff]
Length = 800
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/563 (39%), Positives = 329/563 (58%), Gaps = 26/563 (4%)
Query: 47 GSRTLPLSVAPAPKGSLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKA 106
G R P P P+ + VP + V+ A D L + +P +
Sbjct: 239 GGRPPPAVAFPQPRPPTFYGNAPPVP-IDVQLVDRERFGAAEPNKRDKWLSDFYASVPGS 297
Query: 107 TWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAP-DLREKYDQ 165
T++A ++WTFP+ +S K + + G + L P + R P ++ + D+
Sbjct: 298 TFDACTKMWTFPLSCYTSFTKAIEDSRGVTLN-GPLPPWIMRLFVYKEKKPLNMSVQLDK 356
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
IP + + L PFQR+GV FALQ GR L+ADEMGLGKT+QAIA+A +++ WPVL++ PS
Sbjct: 357 IPVGLLNALYPFQREGVMFALQRNGRALIADEMGLGKTLQAIAIAAYYKEDWPVLVVAPS 416
Query: 226 SLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
S+R+ WA ++W+ + P +I V++ TK N DGL NIISYD
Sbjct: 417 SVRVQWADNFEKWIPGLRPDQIKVIM----------------KTKDNP--DGLVNIISYD 458
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
+V++ NI F+++IADESH +K+ +AKRT+ P++K A+ +LL+GTPALSRP E
Sbjct: 459 LVVRQTNI-AQKKFRVIIADESHTIKSWKAKRTSHLQPLLKDARRCILLTGTPALSRPEE 517
Query: 345 LFKQLEALYPDVYKNVHEYGNRYCKGGVFGI---YQGASNHEELHNLMKATVMIRRLKKD 401
LF QL AL V+ + ++G RYC G Y G+SN +EL+ L++ TVMIRRLK D
Sbjct: 518 LFTQLHALDSQVFVRMTDFGVRYCAGHQTRFCWDYSGSSNLKELNLLLQETVMIRRLKCD 577
Query: 402 VLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLIN 461
VL QLP K+R QVFL + +K + I + +++ K S + +S +F LI
Sbjct: 578 VLGQLPAKKRMQVFLGIIDKHKKIIGNINDKIKEHKKMFHIAHSTDAAKSARFEAWRLIK 637
Query: 462 KIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
++Y ++ AK+PAV +Y++ +++ K ++FA+H ++D I L ++ V +RIDG TP
Sbjct: 638 ELYHNTGTAKLPAVTEYIKEMLKTKNKIIVFAYHHDVMDGIGLLLEREGVEYVRIDGMTP 697
Query: 522 PASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHR 581
P RQ LV +Q + + +AAVL + + GVGLT+T A VI EL W PG L QAEDRAHR
Sbjct: 698 PQHRQELVDYYQNQPNCRAAVLGLTSAGVGLTMTKAEAVIMTELYWNPGILRQAEDRAHR 757
Query: 582 IGQVSSVNVYYLLANDTVDDIVW 604
IG V V+YL+A T+D+ +W
Sbjct: 758 IGVEHEVEVFYLVARGTLDESIW 780
>gi|302831510|ref|XP_002947320.1| hypothetical protein VOLCADRAFT_103414 [Volvox carteri f.
nagariensis]
gi|300267184|gb|EFJ51368.1| hypothetical protein VOLCADRAFT_103414 [Volvox carteri f.
nagariensis]
Length = 986
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/552 (39%), Positives = 335/552 (60%), Gaps = 44/552 (7%)
Query: 108 WNAKERLWTFPVPFLSSAEKVLSEISGYNVE----IENLHP----LVQRAIASASAAPDL 159
++ K + WTFP LS V+ ++G + + +L P V+ + +A++ +
Sbjct: 309 YDHKVQGWTFP---LSEYRHVMEALTGGRLATRRVVVSLQPTLPDFVKNMLEAAASRTND 365
Query: 160 REKYDQI--PAH-----IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATC 212
+YD++ AH ++ K++PFQRDGVR AL+ GGR L+ DEMGLGKT+QA + C
Sbjct: 366 ERQYDKLMRRAHEGEQSLDEKMMPFQRDGVRHALRLGGRALIGDEMGLGKTVQACCLLKC 425
Query: 213 FRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNI 272
+ + WP L++ P SLR WA + WL + E+ ++ S G + S+ K
Sbjct: 426 YAEDWPALVVVPKSLRETWADALFMWLKLTDQEVFLINSPKDVDTLRG-SWSSAKPK--- 481
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
+ISYD + + + + ++V+ DE+H++KN +AKRT A LP+IK+A++A+L
Sbjct: 482 -----MVVISYDTLSRAGDQIQKLKPQMVVLDEAHYIKNGKAKRTEAALPLIKQARHAVL 536
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC---------KGGVFGIYQGASNHE 383
L+GTPALS+P EL L+ L+P + + RYC K G ++G+ N
Sbjct: 537 LTGTPALSKPNELVPLLQGLFPTAGIKANAFNERYCVPDFICCGIKSRHPGKFRGSKNET 596
Query: 384 ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC 443
EL+ L++ VM+RRLK DVL LP K+RQQVF+ + +K+ R++ + RELE ++ +
Sbjct: 597 ELNRLLQGVVMVRRLKADVLKHLPAKQRQQVFIRLPDKETRELGKMKRELEGIRAVANSM 656
Query: 444 KSEEEVQSL---KFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPML 499
S L ++ I +++ D+AE K AV +Y ++EA G KFL+FAHH+ +L
Sbjct: 657 MSAGGASGLAGVSHEQQQTIMRLWRDTAEIKKTAVAEYCSDLLEADGAKFLLFAHHKVLL 716
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
DA+ L K IRIDGGT R LV +FQE DVK A+LS+KA GVGLT+TA+S
Sbjct: 717 DAVKSL----KARYIRIDGGTSGDDRGRLVKQFQEDADVKVAILSIKAAGVGLTMTASSL 772
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
V+FAELSW PGD+ QAEDR HRIGQ +SVN+++LL ++D+++WD +++KL ++G+VLD
Sbjct: 773 VVFAELSWVPGDIQQAEDRCHRIGQHTSVNIHFLLVRGSIDELMWDTLQNKLSDVGKVLD 832
Query: 620 GHENSLEVSSSQ 631
G ++V +++
Sbjct: 833 GSGAFIKVDTTR 844
>gi|412985555|emb|CCO19001.1| predicted protein [Bathycoccus prasinos]
Length = 698
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/536 (41%), Positives = 321/536 (59%), Gaps = 45/536 (8%)
Query: 143 HPLVQRAIASASAAPD---LREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
HP V+R++ SA + +++ IP + KL PFQ +GV+F L+ GR ++ DEMG
Sbjct: 178 HPFVRRSLRSADRMIHDKMVDNQFNSIP--FKDKLFPFQSEGVKFVLKRDGRAMIGDEMG 235
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPS-----EIVVVLSQLG 254
LGK+IQA+ V+ + WP +I PSSL+ W I++WL E V + ++
Sbjct: 236 LGKSIQALGVSKVYSKDWPCVIFCPSSLKDTWKHEIEKWLGGVDGDDGKGECAVKVRKIE 295
Query: 255 GSNRSGFTI----VSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKI-----VIADE 305
+ S + +SN + F I+ Y + ++Q L F + V+ DE
Sbjct: 296 SAKESKDILNEMRKNSNGSGSASTKIDFIIVPYSICNQIQKELFELVFNVMKANVVVCDE 355
Query: 306 SHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGN 365
SHFLK+ +AKRT A +P + +A+ A+ L+GTPAL++PIELF QL +L PD++ + EYG
Sbjct: 356 SHFLKDRKAKRTMAVVPFLIRAKRAICLTGTPALAKPIELFSQLTSLRPDIFPKLSEYGQ 415
Query: 366 RYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDV--AEKDM 423
RYC GG FG + G+S +EL ++ ++VMIRR KKDVL QLP K+R+Q+FL++ AE+
Sbjct: 416 RYCSGGRFGAFSGSSESQELFAVVSSSVMIRRKKKDVLTQLPPKQREQIFLEIPKAERTS 475
Query: 424 RQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVI 483
+ ++ ++A + E ++L+ K L+NK Y +AEAK+ V +YL+ ++
Sbjct: 476 K-----------IQPIVQAMNALPETETLE--RKMLMNKYYLSTAEAKVKTVQNYLQNLL 522
Query: 484 EA---GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD--DV 538
E+ K L FAHH+ +L A + K K IRIDG TP RQ LV FQ D
Sbjct: 523 ESVDEEKKILFFAHHKCLLHAAVETMEKTKTKFIRIDGETPSGLRQGLVDSFQRCDANSP 582
Query: 539 KAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
K AVLS+KA GVGLTLT AS V+F+E SWTP +++QAEDRAHRIGQ SV V +L A D+
Sbjct: 583 KVAVLSIKAAGVGLTLTRASLVVFSEYSWTPAEILQAEDRAHRIGQRDSVLVQFLHAKDS 642
Query: 599 VDDIVWDVVRSKLENLGQVLDG------HENSLEVSSSQIRSSPAKQKTLDSFLKR 648
VDDI+W V++KLE LG LDG E +E ++ + +S A QKTLD F+ R
Sbjct: 643 VDDIIWQSVQNKLETLGHFLDGTKKGNKMETKMEDAADRRQSFDATQKTLDEFVGR 698
>gi|156407998|ref|XP_001641644.1| predicted protein [Nematostella vectensis]
gi|156228783|gb|EDO49581.1| predicted protein [Nematostella vectensis]
Length = 532
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/547 (39%), Positives = 318/547 (58%), Gaps = 45/547 (8%)
Query: 80 LHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEI 139
L +S K + L++ F+ +P ++ W+F + + ++ G V +
Sbjct: 2 LISSTRFTVKIGFHAQLIALFKTLPSRAYDKATTTWSFSLEDYETLMSASRDLVG--VSL 59
Query: 140 ENLHPLVQRAIASASAAPDLRE------KYDQIPAHIESKLLPFQRDGVRFALQHGGRIL 193
E L P ++ + S+ L+ + + + S L+PFQR+GV F + GR +
Sbjct: 60 EGL-PKTVLSLFTKSSPGTLKSLSTEDINLNCVDTKLVSSLMPFQREGVAFCICQDGRAI 118
Query: 194 LADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQ 252
+AD+MGLGKT+QAI VA+ +R WP+L++ PSS+RL W +WL ++ P I VVL+
Sbjct: 119 IADDMGLGKTVQAICVASYYRKEWPLLVVAPSSMRLTWKQAFIKWLPSLDPQSINVVLT- 177
Query: 253 LGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA 312
G N + GL NIISYD++ K L F+++IADESHF+KN
Sbjct: 178 -GKDNVTA---------------GLINIISYDLLTKFVGKLQEKRFRVIIADESHFIKNN 221
Query: 313 QAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG-- 370
+A RT LPI+K A +LLSGTPALSRP EL+ Q+ A+ P ++ + HE+G RYC G
Sbjct: 222 KAARTKTFLPILKAATRVILLSGTPALSRPEELYTQICAVNPRMFPSFHEFGKRYCAGVE 281
Query: 371 GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYAL 429
+G Y GASN EEL +++ ++MIRRLKKDVL QLP KRRQ V LD + ++ +
Sbjct: 282 NRWGWDYSGASNMEELQLVLEQSIMIRRLKKDVLHQLPSKRRQMVLLDPSLIKVKPLMKA 341
Query: 430 FRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKF 489
+E+E K K E+ L + + +++ +KI AV +Y+ ++E G KF
Sbjct: 342 AKEVETAK------KKEQHGALLNY---------FCETSASKIAAVRNYVLDLLEGGHKF 386
Query: 490 LIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGG 549
L+F HHQ MLDAI + KK IRIDG TP + RQ L +FQ+ + AVLS+ A
Sbjct: 387 LVFGHHQDMLDAISDCLMHKKYSYIRIDGKTPSSKRQMLCDQFQKDKNTVVAVLSITAAN 446
Query: 550 VGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRS 609
GLTLT + V+FAEL W PG L+QAEDR +RIGQ +SVN++YL+A T DD +W +++
Sbjct: 447 TGLTLTEGTAVVFAELFWNPGALVQAEDRVYRIGQKNSVNIHYLVAKGTADDYLWPLIQH 506
Query: 610 KLENLGQ 616
KL+ L +
Sbjct: 507 KLDVLSK 513
>gi|428173499|gb|EKX42401.1| hypothetical protein GUITHDRAFT_141340 [Guillardia theta CCMP2712]
Length = 542
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/546 (39%), Positives = 323/546 (59%), Gaps = 41/546 (7%)
Query: 86 IAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVE------I 139
+ A+ Y+P +++ F+++ ++N + R W+F V LS+ S +V+ +
Sbjct: 7 MTARCAYNPKVINIFKEMKTRSYNPQSREWSFHVSEHDELVSSLSKCSNVSVKPLPATFL 66
Query: 140 ENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
+ L L ++ A +S L + +P + + LLPFQR+G+ FA++HGGR L+ DEMG
Sbjct: 67 KALRELESQSSAVSSEMVSLEHIWQALPPDLLAGLLPFQREGIAFAIRHGGRALIGDEMG 126
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRS 259
LGKT+QAIA+A + WP+LI+TPS LRL W + +WL E V V+ + G ++
Sbjct: 127 LGKTVQAIAIAKYYEKEWPLLIVTPSPLRLVWKQELMKWLKDVDHEDVNVI--MSGKDQM 184
Query: 260 GFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
G G IISYD+ LK L + ++IADESHFLK++ AKRT A
Sbjct: 185 G---------------GKITIISYDLFLKFTEELSKMSINVLIADESHFLKSSSAKRTKA 229
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-Y 376
LP+I+K + A+LL+GTPALSRP EL+ Q+ +L P ++ + +E+ RYC K G + +
Sbjct: 230 ILPLIRKVRRAILLTGTPALSRPSELYTQISSLRPKLFGSWNEFAYRYCDAKPGRWALDA 289
Query: 377 QGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVV 436
GASN EL L+ VMIRRLK +VL QLP KRRQQ+++ +++ E++ +
Sbjct: 290 SGASNLSELRCLLN-DVMIRRLKSEVLTQLPSKRRQQIWVQTSKEANAAFKKKLEEMQSL 348
Query: 437 KGKIKACKSE-EEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHH 495
+ ++ EE ++ K + L+N++Y ++ K+ AV +YL T+++ G KFL+F HH
Sbjct: 349 NAIVMNNRAAPEERKNAKGLAQLLMNQLYKETGAEKLAAVKEYLATMVDGGGKFLVFGHH 408
Query: 496 QPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLT 555
++ + H R T + R LV FQ+ D+ AAVLS+ A G GLT T
Sbjct: 409 -----------IEDEEHPHRRS--TSMSERARLVDAFQKDPDISAAVLSVTAAGTGLTFT 455
Query: 556 AASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLG 615
AA+ V+FAEL WTPG ++QAEDR HRIGQ SVN++Y+LA +VDDI+W + KL +G
Sbjct: 456 AANAVVFAELHWTPGVMMQAEDRVHRIGQQYSVNIHYMLAKGSVDDIMWPCIEKKLNVVG 515
Query: 616 QVLDGH 621
LDG
Sbjct: 516 NALDGQ 521
>gi|167524411|ref|XP_001746541.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774811|gb|EDQ88437.1| predicted protein [Monosiga brevicollis MX1]
Length = 1057
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/526 (41%), Positives = 318/526 (60%), Gaps = 62/526 (11%)
Query: 160 REKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPV 219
R+ D++P + LLPFQR+ V F + GRIL+ D+MG GKTI AIA+A FR WPV
Sbjct: 54 RDLADRLPVRLWQGLLPFQREAVVFGVARNGRILIGDQMGCGKTISAIALACAFRQEWPV 113
Query: 220 LILTPSSLRLHWAAMIQQWLN-IPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
LI+ P+S+R W +++WL + P++I VV RSG + LD
Sbjct: 114 LIVAPTSVRGSWVDELEEWLRFLTPNDICVV--------RSGKDVAR--------LDAAV 157
Query: 279 NIISYDVVLK--LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
+++Y ++ + + + L + FK+VI DESH+LKN++AKRT + LPI+++A+ ++LSGT
Sbjct: 158 VVVTYGLLNQSTMMDALAAQRFKVVIIDESHYLKNSRAKRTQSLLPILRRARRVIMLSGT 217
Query: 337 PALSRP----------------------IELFKQLEALYPDVYKNVHEYGNRYC--KGGV 372
PAL+RP EL+ Q++AL P + Y RYC K
Sbjct: 218 PALARPEKQEERARESRLASAHFPQMRAQELYTQVDALKPGYLGSWTSYAQRYCDRKRNY 277
Query: 373 FGIY--QGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF 430
FG + +GASN ELH+ ++A +MIRRLKKDVL+QLP KRRQ+V LDV E D++++ +
Sbjct: 278 FGGWDTKGASNLPELHDKLRA-IMIRRLKKDVLSQLPPKRRQRVLLDVGEADLKRVQQIK 336
Query: 431 RELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFL 490
++L+ K+ +E ++QS L+ +Y ++ AKIPAV +Y+ + + G KFL
Sbjct: 337 QQLD----KLDPVDAESKMQS-----HALLQSLYKETGAAKIPAVREYIRGLCQTGDKFL 387
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGV 550
+FA+H +LDA+H + K+ I I G TP + RQA V +FQ D + A+LSM A G
Sbjct: 388 VFAYHLDVLDAVHVEVVAAKLDYIMIRGDTPVSERQAGVRKFQGNDSCRVAILSMTAAGQ 447
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
GLTLTAASTVIFAEL WTPG + QAEDR HRIGQ VNV YL+A T+DD +W++V K
Sbjct: 448 GLTLTAASTVIFAELHWTPGIIEQAEDRVHRIGQGDPVNVQYLVARRTLDDTMWNIVDRK 507
Query: 611 LENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKRCNNVDDSE 656
+ + LDG L ++S A+++ D L++ N++ DSE
Sbjct: 508 VGVVSSALDGQRERLRA-----KNSTAQREMGD--LRQRNSLVDSE 546
>gi|340369960|ref|XP_003383515.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Amphimedon queenslandica]
Length = 710
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 225/571 (39%), Positives = 321/571 (56%), Gaps = 48/571 (8%)
Query: 73 KLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEI 132
+++ F L + + Y+P L+ F+ I +++A ++W+F L +K++ E+
Sbjct: 75 RITASFILKDASHFKVLVPYEPTLIDLFKTIKSRSYDASTQVWSFA---LQDYQKLIKEM 131
Query: 133 SGY--NVEIENLHPLVQRAI----ASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFAL 186
+V+ + + V A A + K D+I +HI S L+ FQ++G+ + +
Sbjct: 132 RERVPHVQFDLIPKPVLDAFHGNKGGAKKTTPINYK-DRIGSHIYSTLMDFQKEGIEYII 190
Query: 187 QHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSE 245
Q GR LLAD+MGLGKTIQAIAVA+ +R WP+L++ PSSL++ WA Q+W+ ++ +
Sbjct: 191 QRQGRCLLADDMGLGKTIQAIAVASYYRSDWPLLVVCPSSLKISWAEAFQRWIPSLSKKD 250
Query: 246 IVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADE 305
I V+++ P GL IISYD++ K+ VIADE
Sbjct: 251 INVIMTM------------------KCPTKGLVTIISYDLLSKMSKQFKEMGPGFVIADE 292
Query: 306 SHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGN 365
SHFLKN + R+ AT+P+IKKA+ ALLLSGTPALSRPIEL+ Q+ +L ++ +YG
Sbjct: 293 SHFLKNYKTARSKATVPLIKKAKRALLLSGTPALSRPIELYTQIASLDKQFTLSIIDYGK 352
Query: 366 RYCKGGV--FGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKD 422
RYC G FG + G+SN EL M+ +MIRRLK DVL QLP K+RQ V LD +
Sbjct: 353 RYCSGAQNKFGWDFSGSSNMSELQLFMEQKLMIRRLKIDVLDQLPSKQRQTVLLDPSMTK 412
Query: 423 MRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETV 482
R ++EL+ K+ K T K + +++ + K+PAV DY+
Sbjct: 413 GRA--KEWKELQTELSKVPTLD--------KKTRKAALLPLFSKTGLMKLPAVKDYIIDQ 462
Query: 483 IEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAV 542
++ K L+FAHH+ ++D I Q KK +RIDG T RQ FQ AV
Sbjct: 463 LQGDRKLLVFAHHKQVMDGICQSLRDKKYPFVRIDGNTASELRQQYCDRFQHDTKCLVAV 522
Query: 543 LSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDI 602
LS+ A GLTLTAAS VIFAEL W PG L+QAEDR +RIGQ +SVN+YYL+A DT DD
Sbjct: 523 LSITAANTGLTLTAASCVIFAELFWNPGVLVQAEDRVYRIGQHNSVNIYYLVAQDTADDY 582
Query: 603 VWDVVRSKLENL------GQVLDGHENSLEV 627
+W +VR KL+ L G+ EN+ V
Sbjct: 583 IWPMVRRKLKVLNEAGLAGEDFTSSENATHV 613
>gi|326922946|ref|XP_003207703.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Meleagris gallopavo]
Length = 760
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 233/581 (40%), Positives = 338/581 (58%), Gaps = 47/581 (8%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIA 151
Y +V F+++ ++ K R W F + KV + +VE+E L V +A A
Sbjct: 169 YSAEVVGVFKQMNSRNYDMKTRKWNFLLEDYPKLMKVFQNL--VSVEVEPLPGTVIQAFA 226
Query: 152 SASAAPDLREKYD-------QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTI 204
A +K D + + I + L+PFQR+GV FA+ GR+LLAD+MGLGKT+
Sbjct: 227 -AQIQSSTSQKMDFPDADLSVVDSKIVTSLMPFQREGVNFAVLKNGRLLLADDMGLGKTV 285
Query: 205 QAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIV 264
QAI +A ++ WP+L++TPSS+R WA +WL S R G T V
Sbjct: 286 QAICIAAYYQKEWPLLVVTPSSVRFTWAEAFHRWL---------------PSLRPGSTNV 330
Query: 265 SSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPII 324
K ++ L NIIS+D++ K+ + S+ F+++I DESH+LKN + R A +P++
Sbjct: 331 IVTGKDSLTA-SLINIISFDLLSKMDKQIKST-FQVIIIDESHYLKNIKTARCRAAMPLL 388
Query: 325 KKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASN 381
K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G Y G+SN
Sbjct: 389 KAAKRVILLSGTPAMSRPAELYTQIAAVQPGFFPQFHTFGLRYCDAKKMPWGWDYSGSSN 448
Query: 382 HEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIK 441
EL L++ ++MIRRLK DVL+QLP K+R+ V VA + I A + + + K K
Sbjct: 449 LVELKILLEESIMIRRLKSDVLSQLPAKQRKMVV--VAPEG---INAKTKAMLAAEAK-K 502
Query: 442 ACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLD 500
K E Q EK + Y +AEAKI +V++Y+ ++E+G KFL+FAHH+ +LD
Sbjct: 503 MAKGYESKQQ----EKEALLLFYNRTAEAKIHSVIEYILELLESGKDKFLVFAHHKVVLD 558
Query: 501 AIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTV 560
AI + KK IRIDG TP A RQ+L +FQ + AVLS+ A +GLTL+AA V
Sbjct: 559 AIVEELEKKHFDYIRIDGSTPSAERQSLCQKFQLSEKQAVAVLSLTAANMGLTLSAADLV 618
Query: 561 IFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV--- 617
+FAEL W PG LIQAEDRAHRIGQ SSVNV+YL+A T DD +W +++ K++ LG+
Sbjct: 619 VFAELFWNPGVLIQAEDRAHRIGQTSSVNVHYLVARGTADDFLWPMIQEKIKVLGEAGLS 678
Query: 618 LDGHENSLEVSSSQIRSSPAKQKTLDSFLKRC--NNVDDSE 656
N+ E ++ + P KQKT+ +R ++ DD++
Sbjct: 679 ETNFSNTAESTNYYPKPDP-KQKTIYDLFQRTFSDSKDDTD 718
>gi|326923079|ref|XP_003207769.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger Ran-binding
domain-containing protein 3-like [Meleagris gallopavo]
Length = 1262
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/472 (42%), Positives = 294/472 (62%), Gaps = 27/472 (5%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
+P + KLLPFQ G+ FALQ GR ++ADEMGLGKTIQAIA++ +R WP+LI+ PS
Sbjct: 192 LPERLRKKLLPFQEKGIMFALQRSGRCMIADEMGLGKTIQAIAISYYYRKEWPLLIVVPS 251
Query: 226 SLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
SLR W +++W+ + P +I+++ N++ +SS+ + + G + +++ D
Sbjct: 252 SLRYPWVDEMEKWIPELSPDDIIII------QNKTDIGRISSS---KVTVLG-YGLLTSD 301
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
L + L NFK+V+ DESH++K+ AKR+ LPI++KA A+LL+GTPAL RP E
Sbjct: 302 AQT-LVDALYRQNFKVVVIDESHYMKSRNAKRSKILLPIVQKATRAILLTGTPALGRPEE 360
Query: 345 LFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMIRR 397
LF Q+EAL+P + EY +YC + FG +GASN EELH L++ +MIRR
Sbjct: 361 LFMQIEALFPGRFGTWSEYAKKYCDARLRFFGKRKQWDCRGASNLEELHQLLRK-IMIRR 419
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTE- 456
LK DVL QLP K RQ++ D+ + + + F E E + K+ + E F E
Sbjct: 420 LKNDVLTQLPPKIRQRIPFDLPQATAKNLNTTFAEWEKLMRKLNS-----ESSDSHFVEV 474
Query: 457 KNLINKIYTDSAEAKIPAVLDYLETVIEAG-CKFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
+LI ++Y ++A AK AV DY+ ++E KFL+FAHH ML A + ++ KV IR
Sbjct: 475 MSLITRMYKETAIAKAGAVKDYIRMMLENDKLKFLVFAHHLSMLQACAEAVIENKVRYIR 534
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
IDG P A R LV +FQ+ D + A+LS++A G GLT TAA+ V+FAEL W PG + QA
Sbjct: 535 IDGSVPSAERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAATHVVFAELYWDPGHIKQA 594
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
EDRAHRIGQ SSVN+++L+A T+D ++W ++ K + G L+G + ++
Sbjct: 595 EDRAHRIGQCSSVNIHFLIAKGTLDPLMWAMLNRKAKVTGSTLNGKKERMQA 646
>gi|328875547|gb|EGG23911.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum]
Length = 1107
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/546 (39%), Positives = 328/546 (60%), Gaps = 43/546 (7%)
Query: 139 IENLHPLVQ-----RAIASASAAPDLRE----KYDQIPAHIESKLLPFQRDGVRFALQHG 189
+E+L P V+ + I ++ A P+++ ++PA + + L+PFQ G+ F ++H
Sbjct: 327 LESLGPRVKVIKLPKHIINSFANPNIKLPPPIDLSRVPATLLNTLMPFQLKGLEFGVEHE 386
Query: 190 GRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLN--IPPSEIV 247
GR ++ DEMGLGKT+QAIA++ +R WP+LI+TPSSLRL WA + ++L EI
Sbjct: 387 GRCIVGDEMGLGKTVQAIAISYYYRKEWPLLIITPSSLRLVWADALDKFLPGIFKSGEIN 446
Query: 248 VVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVV-LKLQNILMSSNFKIVIADES 306
+V+S G L+GL NIISYD+ KL+++L + NFK+VIADES
Sbjct: 447 LVMSGKCG------------------LNGLVNIISYDLCRTKLEDVL-AKNFKVVIADES 487
Query: 307 HFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNR 366
HF+K+ +++RT I+ KA LLL+GTPA+SRP EL++Q+ + P + +Y R
Sbjct: 488 HFIKDFKSQRTQCVGKIMAKANRKLLLTGTPAISRPCELYQQIHCIAP-FFLGWKDYVFR 546
Query: 367 YCKGGVFGI----YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKD 422
YC Y G SN +EL+ + T+MIRRLK DVL+ LP KRR+++ +++ + D
Sbjct: 547 YCNAYYDKFHRLNYFGNSNSKELNTYLN-TIMIRRLKDDVLSDLPEKRREKILVEIKKGD 605
Query: 423 MRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETV 482
+R+I +++ K IK E +++K+L K++ D+ K+ A+ +L+
Sbjct: 606 LRKIKKTMGDIQSAKNTIKNTGDRTEAARKTYSKKSLYTKLFRDTGLGKLGAIDRFLKDK 665
Query: 483 IEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+E KF+IFAHH +LD I + + IRIDG T +R V FQ D ++AA
Sbjct: 666 LEVFDGKFIIFAHHLDVLDGISNVLKSRNCEYIRIDGNTNVQTRADYVNLFQTDDTIRAA 725
Query: 542 VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 601
VLS+ A GLTLTAA+ VIFAEL WTPG L QAEDRAHR GQ SSV + YL+ +VD+
Sbjct: 726 VLSLTAASTGLTLTAANLVIFAELYWTPGTLFQAEDRAHRYGQTSSVLIQYLVGIGSVDE 785
Query: 602 IVWDVVRSKLENLGQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLKRCNNVDDSEHQQ 659
+W+++ K + LG+VLDG ++LEV + +++ + LD+ +KR V+D + +
Sbjct: 786 SIWNMIEEKKDVLGRVLDGQGSALEVDQTDTILQNENQIEDYLDAIIKR---VEDRDAVR 842
Query: 660 KLKYRK 665
++KY K
Sbjct: 843 QIKYEK 848
>gi|345784223|ref|XP_533335.3| PREDICTED: zinc finger Ran-binding domain-containing protein 3
[Canis lupus familiaris]
Length = 1072
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/478 (42%), Positives = 299/478 (62%), Gaps = 33/478 (6%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
++ D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAIAVA +++ WP+L
Sbjct: 24 KQLDFLPDKLRAKLLPFQKDGIAFALRRDGRCMVADEMGLGKTIQAIAVAYFYKEEWPLL 83
Query: 221 ILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQ--LGGSNRSGFTIVSSNTKRNIPLDGL 277
I+ PSSLR W I++W+ + P +I V+ ++ +G + S TI+
Sbjct: 84 IVVPSSLRYPWTEEIEKWIPELGPEDINVIQNKTDVGRISTSKVTILG------------ 131
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
+ +++ D L ++L + NFK+VI DESH++K+ A R+ LPI++KA+ A+LL+GTP
Sbjct: 132 YGLLTTDAET-LIDVLNNQNFKVVIVDESHYMKSRNATRSKILLPIVQKAKRAILLTGTP 190
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMK 390
AL RP ELF Q+EAL+P + EY RYC + FG +GASN ELH L+
Sbjct: 191 ALGRPEELFMQIEALFPQKFGTWTEYAKRYCNAHIRFFGRRPQWDCRGASNLNELHQLL- 249
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQ 450
+ +MIRRLK DVL QLP K RQ++ D+ +++ + F E E + +KA S
Sbjct: 250 SDIMIRRLKNDVLTQLPPKVRQRIPFDLPSAAAKELNSSFEEWEKL---MKAPNS----- 301
Query: 451 SLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKK 509
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++
Sbjct: 302 GATKTVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIES 361
Query: 510 KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTP 569
K IRIDG P + R LV +FQ+ D + A+LS++A G GLT TAA+ V+FAEL W P
Sbjct: 362 KTRYIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAATYVVFAELYWDP 421
Query: 570 GDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
G + QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + L+
Sbjct: 422 GHIKQAEDRAHRIGQCSSVNIHYLVANGTLDTLMWGMLNRKTQVTGSTLNGRKEQLQA 479
>gi|345326021|ref|XP_001510449.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3
[Ornithorhynchus anatinus]
Length = 982
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/473 (42%), Positives = 296/473 (62%), Gaps = 25/473 (5%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
+P + ++LLPFQ+DG+ FAL GGR ++ADEMGLGKTIQAIA+A ++ WP+L++TPS
Sbjct: 30 LPVKLRARLLPFQKDGIAFALARGGRCMIADEMGLGKTIQAIAIAYFYKKEWPLLVVTPS 89
Query: 226 SLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
SLR W I++W+ + P EIV++ N++ +S+ +K I GL +
Sbjct: 90 SLRYPWVEEIEKWIPELGPEEIVII------QNKTDVGRIST-SKVTILGYGLLTTDART 142
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
++ L + +FK+V+ DESH++K+ A R+ LP+++ A A+LL+GTPAL RP E
Sbjct: 143 LIETLNH----QHFKVVVVDESHYMKSRNASRSKILLPLVQNADRAILLTGTPALGRPEE 198
Query: 345 LFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMIRR 397
LF Q+EAL+P + EY +YC V FG +GASN ELH L+ + +MIRR
Sbjct: 199 LFMQIEALFPKKFGTWTEYAKKYCNAHVRYFGRRIQWDCRGASNLSELHRLL-SDIMIRR 257
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEK 457
LK +VLAQLP K RQ++ D+ +Q+ A F E E + ++A S S F+
Sbjct: 258 LKSEVLAQLPPKVRQRIPFDLPAGAAKQLNASFEEWEKL---MRASASGTTENSGDFSRA 314
Query: 458 -NLINKIYTDSAEAKIPAVLDYLETVIE-AGCKFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
LI +++ ++ AK AV DY++ +++ KFL+FAHH ML A + ++ KV IR
Sbjct: 315 MGLITRLFKETTLAKAGAVKDYIKLMLQNESLKFLVFAHHLSMLQACTEAAVENKVRYIR 374
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
IDG P + R LV +FQ+ D + AVLS++A G GLT TAA+ V+FAEL W PG + QA
Sbjct: 375 IDGSVPSSERMHLVQQFQKDPDTRMAVLSIQAAGQGLTFTAATHVVFAELYWDPGHIKQA 434
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
EDRAHRIGQ SSVN++YL+AN T+D ++W ++ K G L+G + L+ +
Sbjct: 435 EDRAHRIGQCSSVNIHYLIANGTLDSVMWGMLNRKAGITGSTLNGRKERLQAA 487
>gi|363736302|ref|XP_422070.3| PREDICTED: SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily a-like 1 [Gallus
gallus]
Length = 966
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 232/581 (39%), Positives = 338/581 (58%), Gaps = 47/581 (8%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIA 151
Y +V F+++ ++ K R W F + KV + +VE+E L V +A A
Sbjct: 374 YSAEVVGVFKQMNSRNYDMKTRKWNFLLEDYPKLMKVFQSL--VSVEVEPLPGTVIQAFA 431
Query: 152 SASAAPDLREKYD-------QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTI 204
A +K D + + I + L+PFQR+GV FA+ GR+LLAD+MGLGKT+
Sbjct: 432 -AQIQSSTSQKMDFPDVDLSVVDSKIVTSLMPFQREGVNFAILKNGRLLLADDMGLGKTV 490
Query: 205 QAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIV 264
QAI +A ++ WP+L++TPSS+R WA +WL S R G T V
Sbjct: 491 QAICIAAYYQKEWPLLVVTPSSVRFTWAEAFHRWL---------------PSLRPGSTNV 535
Query: 265 SSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPII 324
+K ++ L NIIS+D++ K+ L S+ F++VI DESH+LKN + R A +P++
Sbjct: 536 IVTSKDSLTA-SLINIISFDLLSKMDKQLKST-FQVVIIDESHYLKNIKTARCRAAMPLL 593
Query: 325 KKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASN 381
K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H + RYC K +G Y G+SN
Sbjct: 594 KAAKRVILLSGTPAMSRPAELYTQIAAVQPGFFPQFHTFALRYCDAKKMPWGWDYSGSSN 653
Query: 382 HEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIK 441
EL L++ ++MIRRLK DVL+QLP K+R+ V VA + I A + + + K
Sbjct: 654 LAELKILLEESIMIRRLKSDVLSQLPAKQRKMVV--VAPEG---INAKTKAMLAAEAKKM 708
Query: 442 ACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAG-CKFLIFAHHQPMLD 500
A E + Q EK + Y +AEAKI +V++Y+ ++E+G KFL+FAHH+ +LD
Sbjct: 709 AKGYESKQQ-----EKEALLLFYNRTAEAKIHSVIEYILDLLESGKNKFLVFAHHKVVLD 763
Query: 501 AIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTV 560
AI + KK+ IRIDG T A RQ+L +FQ + AVLS+ A +GLTL+AA V
Sbjct: 764 AIVEELEKKRFDYIRIDGSTSSAERQSLCQKFQFSEKQAVAVLSLTAANMGLTLSAADLV 823
Query: 561 IFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV--- 617
+FAEL W PG LIQAEDRAHRIGQ SSVNV+YL+A T DD +W +++ K++ LG+
Sbjct: 824 VFAELFWNPGVLIQAEDRAHRIGQTSSVNVHYLVARGTADDFLWPMIQEKIKVLGEAGLS 883
Query: 618 LDGHENSLEVSSSQIRSSPAKQKTLDSFLKR--CNNVDDSE 656
N+ E ++ + P KQKT+ +R ++ DD++
Sbjct: 884 ETNFSNTAESTNYYPKPDP-KQKTIYELFQRTFTDSKDDTD 923
>gi|224054730|ref|XP_002191300.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1
[Taeniopygia guttata]
Length = 963
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 226/569 (39%), Positives = 331/569 (58%), Gaps = 42/569 (7%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIA 151
Y ++ F+K+ ++ R W F + +VL +S +VE+E L V + A
Sbjct: 374 YSAEVIEVFKKMDSRNYDMNTRKWNFLLEDYPKLMEVL--LSLVSVEVEPLPEAVIKTFA 431
Query: 152 SA-SAAPDLREKYDQIPAHIESK----LLPFQRDGVRFALQHGGRILLADEMGLGKTIQA 206
+ +P L + D + ++SK L+PFQR+GV FA+ GR+LLAD+MGLGKTIQA
Sbjct: 432 AQLQRSPSLTDIPDADLSVVDSKIVTSLMPFQREGVNFAISRNGRLLLADDMGLGKTIQA 491
Query: 207 IAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVS 265
I +A ++ WP+L++TPSS+R WA +WL ++ P V++S G N +G
Sbjct: 492 ICIAAYYQQEWPLLVVTPSSVRFTWAQAFHRWLPSLSPESTNVIVS--GKDNLTG----- 544
Query: 266 SNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK 325
L NIIS+D++ ++ L S+ F++VI DESHFLKN + R A +P++K
Sbjct: 545 ----------SLINIISFDLLSRMDKQLKST-FQVVIVDESHFLKNTKTARCQAAMPLLK 593
Query: 326 KAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI---YQGASNH 382
A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC Y G+SN
Sbjct: 594 AAKRVILLSGTPAMSRPAELYTQIAAVQPTFFPQFHSFGLRYCDARKMPWGWDYSGSSNL 653
Query: 383 EELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKA 442
EL L++ ++MIRRLK DVL+QLP K+R+ V + + I A + + K A
Sbjct: 654 TELKILLEESIMIRRLKSDVLSQLPAKQRKMVVVA-----LEGISAKTKAALAAEAKKMA 708
Query: 443 CKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDA 501
E + Q EK + ++ +AEAKI +V++Y+ ++E+G KFL+FAHH+ MLDA
Sbjct: 709 KGYESKQQ-----EKEGLLVYFSRTAEAKIHSVVEYILELLESGNNKFLVFAHHKIMLDA 763
Query: 502 IHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVI 561
+ KK + IRIDG T A RQ+L +FQ + AVLS+ A +GLTL AA V+
Sbjct: 764 VAAELKKKHIEHIRIDGSTSSAERQSLCQKFQLAEKHAVAVLSLTAANMGLTLCAADLVV 823
Query: 562 FAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGH 621
FAEL W PG LIQAEDRAHRIGQ SSVNV+YL+A T DD +W +++ K++ LG+
Sbjct: 824 FAELFWNPGILIQAEDRAHRIGQTSSVNVHYLVAKGTADDYLWPMIQEKIKVLGEAGLSE 883
Query: 622 ENSLEV--SSSQIRSSPAKQKTLDSFLKR 648
N E S++ + KQKT+ ++
Sbjct: 884 TNFSETAESTNYCPKTDPKQKTIYDLFQK 912
>gi|224056086|ref|XP_002194081.1| PREDICTED: DNA annealing helicase and endonuclease ZRANB3
[Taeniopygia guttata]
Length = 1026
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 201/486 (41%), Positives = 298/486 (61%), Gaps = 29/486 (5%)
Query: 153 ASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATC 212
AS D+ K +P + KLLPFQ G+ FALQ GR ++ADEMGLGKTIQAIA++
Sbjct: 13 ASQLEDVDPKLSFLPERLRRKLLPFQEKGIIFALQRSGRCMIADEMGLGKTIQAIAISYY 72
Query: 213 FRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQ--LGGSNRSGFTIVSSNTK 269
+++ WP+LI+ PSSLR W +++W+ + P +I ++ ++ +GG + S TI+
Sbjct: 73 YKNEWPLLIVVPSSLRYPWVDEMEKWIPELSPDDISIIQNKTDIGGISTSKVTILG---- 128
Query: 270 RNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQY 329
+ +++ D L + L FK+V+ DESH++K+ A R+ LPI++KA
Sbjct: 129 --------YGLLTSDAQT-LVDTLYRQKFKVVVIDESHYMKSRNATRSKILLPIVQKALR 179
Query: 330 ALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNH 382
A+LL+GTPAL RP ELF Q+EAL+P + +EY +YC V FG +GASN
Sbjct: 180 AVLLTGTPALGRPEELFMQIEALFPRRFGTWNEYAKKYCDARVRFFGKRRQWDCRGASNL 239
Query: 383 EELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKA 442
EELH L+ + +MIRRLK DVL QLP K RQ++ D+ + + + A F E E + + +
Sbjct: 240 EELHQLL-SEIMIRRLKNDVLTQLPPKVRQRIPFDLPQAAAKNLNATFAEWEKLMRSLSS 298
Query: 443 CKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAG-CKFLIFAHHQPMLDA 501
SE + NLI ++Y ++A AK AV DY++ +++ KFL+FAHH ML A
Sbjct: 299 DASESHFSQVM----NLITRMYKETAIAKAGAVKDYIKMMLDNDKLKFLVFAHHLSMLQA 354
Query: 502 IHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVI 561
+ ++ K IRIDG P A R LV +FQ+ + + A+LS++A G GLT TAA+ V+
Sbjct: 355 CTEAVIESKARYIRIDGSVPSAERIHLVNQFQKDPETRVAILSIQAAGQGLTFTAATHVV 414
Query: 562 FAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGH 621
FAEL W PG + QAEDRAHRIGQ SSVN+++L+A T+D ++W ++ K + G L+G
Sbjct: 415 FAELYWDPGHIKQAEDRAHRIGQCSSVNIHFLIAKGTMDTLMWAMLNRKAKVTGSTLNGK 474
Query: 622 ENSLEV 627
+ ++
Sbjct: 475 KEKMQA 480
>gi|293352708|ref|XP_002728046.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
[Rattus norvegicus]
Length = 1069
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 201/476 (42%), Positives = 295/476 (61%), Gaps = 33/476 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GGR ++ADEMGLGKTIQAIA++ +++ WP+LI+
Sbjct: 27 DFLPDKLRAKLLPFQKDGIVFALRRGGRCMVADEMGLGKTIQAIAISYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQL--GGSNRSGFTIVSSNTKRNIPLDGLFNI 280
PSSLR W +++W+ + P EI V+ ++ G S T++ + +
Sbjct: 87 PSSLRYPWIEELEKWIPELEPEEINVITNKTDTGRIATSRVTVLG------------YGL 134
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
++ D L+ L NF++VI DESH++K+ A R+ LP+++KAQ A+LL+GTPAL
Sbjct: 135 LTTDAETLLE-ALDRQNFRVVIVDESHYMKSRTAARSKILLPMVQKAQRAILLTGTPALG 193
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATV 393
RP ELF Q+EAL+P + EY RYC + FG +GASN ELH L+ +
Sbjct: 194 RPEELFMQIEALFPQRFGTWVEYAKRYCNAHIRYFGKRRQWDCRGASNLSELHQLLN-DI 252
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL+QLP K RQ++ D+A ++++ A F E + + A E
Sbjct: 253 MIRRLKSEVLSQLPPKVRQRIPFDLAPATVKELNASFEEWQKLMRAPDAGAME------- 305
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 306 -TVMGLITRMFKQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKAR 364
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG P + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG +
Sbjct: 365 YIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELFWDPGHI 424
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + L+ +
Sbjct: 425 KQAEDRAHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKLQAT 480
>gi|149058725|gb|EDM09882.1| rCG46237 [Rattus norvegicus]
Length = 716
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 201/476 (42%), Positives = 295/476 (61%), Gaps = 33/476 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GGR ++ADEMGLGKTIQAIA++ +++ WP+LI+
Sbjct: 27 DFLPDKLRAKLLPFQKDGIVFALRRGGRCMVADEMGLGKTIQAIAISYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQL--GGSNRSGFTIVSSNTKRNIPLDGLFNI 280
PSSLR W +++W+ + P EI V+ ++ G S T++ + +
Sbjct: 87 PSSLRYPWIEELEKWIPELEPEEINVITNKTDTGRIATSRVTVLG------------YGL 134
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
++ D L+ L NF++VI DESH++K+ A R+ LP+++KAQ A+LL+GTPAL
Sbjct: 135 LTTDAETLLE-ALDRQNFRVVIVDESHYMKSRTAARSKILLPMVQKAQRAILLTGTPALG 193
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATV 393
RP ELF Q+EAL+P + EY RYC + FG +GASN ELH L+ +
Sbjct: 194 RPEELFMQIEALFPQRFGTWVEYAKRYCNAHIRYFGKRRQWDCRGASNLSELHQLLN-DI 252
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL+QLP K RQ++ D+A ++++ A F E + + A E
Sbjct: 253 MIRRLKSEVLSQLPPKVRQRIPFDLAPATVKELNASFEEWQKLMRAPDAGAME------- 305
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 306 -TVMGLITRMFKQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKAR 364
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG P + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG +
Sbjct: 365 YIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELFWDPGHI 424
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + L+ +
Sbjct: 425 KQAEDRAHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKLQAT 480
>gi|334329860|ref|XP_001370015.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3
[Monodelphis domestica]
Length = 1416
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 200/474 (42%), Positives = 299/474 (63%), Gaps = 29/474 (6%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
+P + ++LLPFQ++G++FAL+ GR ++ADEMGLGKTIQA+A+A +++ WP+LI+ PS
Sbjct: 29 LPKKLRARLLPFQKNGIKFALKRDGRCMVADEMGLGKTIQAVAIAYFYKNEWPLLIVVPS 88
Query: 226 SLRLHWAAMIQQWL-NIPPSEIVVVLSQ--LGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
SLR W I++W+ + P EIV++ ++ +G + S T++ + +++
Sbjct: 89 SLRYPWTEEIEKWIPELGPQEIVIIQNKTDIGSISTSKVTVLG------------YGLLT 136
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
D L L + L + NFK+VI DESH++K+ A R+ LPII+ ++ A+LL+GTPAL RP
Sbjct: 137 TDAKL-LIDTLYNQNFKVVIIDESHYMKSRNASRSKILLPIIQNSRRAILLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q++ALYP + EY RYC + FG +GASN ELH L+ + +MI
Sbjct: 196 EELFMQIDALYPKRFGTWTEYAKRYCNAHLRYFGKRAQWDCRGASNLGELHQLL-SNIMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSE-EEVQSLKF 454
RRLK +VL QLP K RQ++ D+ +++ F E E + ++A S+ + S F
Sbjct: 255 RRLKNEVLTQLPPKIRQRIPFDLPSTAAKELNTSFEEWEKL---MRAPHSDANKTGSHFF 311
Query: 455 TEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHC 513
L+ +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ KV
Sbjct: 312 QVMGLMTRMFKQTAIAKAGAVKDYIKLMLQNDLLKFLVFAHHLSMLQACTEAAIESKVRY 371
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
IRIDG P + R LV +FQ+ D + A+LS++A G GLT TAA+ VIFAEL W PG +
Sbjct: 372 IRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAATHVIFAELYWDPGHIK 431
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K G L+G + LE
Sbjct: 432 QAEDRAHRIGQSSSVNIHYLIANGTLDSLMWGMLNRKAIVTGSTLNGRKEKLEA 485
>gi|326437103|gb|EGD82673.1| hypothetical protein PTSG_03334 [Salpingoeca sp. ATCC 50818]
Length = 884
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 202/537 (37%), Positives = 305/537 (56%), Gaps = 45/537 (8%)
Query: 115 WTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASAS----------AAPDLREKYD 164
W P+ + L E++ I L V A+ S++ P+ + Y+
Sbjct: 184 WVLPLRMYKTLLTKLHELTAVETRITGLPKWVLAAMHSSTWNTLELLHSTVTPE--QAYE 241
Query: 165 ----QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
++P + KLLP+Q GV A++ GRIL DEMGLGKT+QA+ A +R WP+L
Sbjct: 242 ALQGRVPLELLQKLLPYQLTGVLCAVRRSGRILWCDEMGLGKTVQALVTALHYRSEWPLL 301
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
I+ PSSL+L WA I +WL + + VV N + L I
Sbjct: 302 IVCPSSLKLTWANEIHRWLGLGEDAVQVV----------------QNGREK--LTHAVCI 343
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
+SYD+ L+ + F++VIADE+H++KN QA RT A +P+++ A+ ALLLSGTPALS
Sbjct: 344 LSYDLARGLRTQVQQRKFRVVIADEAHYIKNRQAARTKALVPVVQDAKRALLLSGTPALS 403
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FG-IYQGASNHEELHNLMKATVMIRR 397
+PIELF+QL AL D+++ +G RYC + +G + G+SN EELH L++ TVMIRR
Sbjct: 404 KPIELFQQLRALRRDLFRVEIAFGERYCNSHMTAYGWCHDGSSNEEELHTLLQRTVMIRR 463
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE-LEVVKGKIKACKSEEEVQSLKFTE 456
KK VL+ LP K RQ V +D + K R+I L ++ + + A + + E+ +
Sbjct: 464 DKKGVLSSLPPKTRQTVVVDCSAKHRREISQLMKKRFHMDAAAVAAGRGDGEMHGVTL-- 521
Query: 457 KNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRI 516
K++ + +AK+ A + Y+ + G K L+FAHHQP++D + Q +K + +RI
Sbjct: 522 -----KLFQATGQAKLAACVTYVLEQLAKGVKMLLFAHHQPVMDGLMQALCEKSIRHVRI 576
Query: 517 DGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAE 576
DG TP + R L T FQ + + A+LS+ A G GLTL AA+ V+FAEL W PG L+QAE
Sbjct: 577 DGSTPSSLRNELATRFQTDETCRVALLSITAAGTGLTLHAATLVVFAELFWNPGQLLQAE 636
Query: 577 DRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIR 633
DRAHR+GQ +V+V YL+ +T+D+ +W+ V K+ +G+ + G ++ + R
Sbjct: 637 DRAHRVGQQCAVDVKYLICRNTLDESMWEKVERKMAVVGRAVKGASETMGAERTDTR 693
>gi|293341309|ref|XP_002724934.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
[Rattus norvegicus]
Length = 1037
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 201/476 (42%), Positives = 295/476 (61%), Gaps = 33/476 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GGR ++ADEMGLGKTIQAIA++ +++ WP+LI+
Sbjct: 27 DFLPDKLRAKLLPFQKDGIVFALRRGGRCMVADEMGLGKTIQAIAISYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQL--GGSNRSGFTIVSSNTKRNIPLDGLFNI 280
PSSLR W +++W+ + P EI V+ ++ G S T++ + +
Sbjct: 87 PSSLRYPWIEELEKWIPELEPEEINVITNKTDTGRIATSRVTVLG------------YGL 134
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
++ D L+ L NF++VI DESH++K+ A R+ LP+++KAQ A+LL+GTPAL
Sbjct: 135 LTTDAETLLE-ALDRQNFRVVIVDESHYMKSRTAARSKILLPMVQKAQRAILLTGTPALG 193
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATV 393
RP ELF Q+EAL+P + EY RYC + FG +GASN ELH L+ +
Sbjct: 194 RPEELFMQIEALFPQRFGTWVEYAKRYCNAHIRYFGKRRQWDCRGASNLSELHQLLN-DI 252
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL+QLP K RQ++ D+A ++++ A F E + + A E
Sbjct: 253 MIRRLKSEVLSQLPPKVRQRIPFDLAPATVKELNASFEEWQKLMRAPDAGAME------- 305
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 306 -TVMGLITRMFKQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKAR 364
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG P + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG +
Sbjct: 365 YIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELFWDPGHI 424
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + L+ +
Sbjct: 425 KQAEDRAHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKLQAT 480
>gi|348519922|ref|XP_003447478.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Oreochromis niloticus]
Length = 810
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 229/578 (39%), Positives = 326/578 (56%), Gaps = 47/578 (8%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIA 151
Y +++AF+++P +++ K R W F + +LS I+ VE PL + I
Sbjct: 225 YHVDVIAAFKQMPTKSYDMKTRKWNFSLEDYKRLMDLLSGIAAVEVE-----PLPRAIIQ 279
Query: 152 SASAAPDLRE---------KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGK 202
+ SA D E I + L+PFQR+GV FA+ GR+LLAD+MGLGK
Sbjct: 280 AFSARFDGTEARILNVPEADLSSIDPSLTRSLMPFQREGVNFAVSKQGRLLLADDMGLGK 339
Query: 203 TIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGF 261
TIQAI +A +R WP+L++TPSS+R WA ++WL ++ P I VV+ + S RSG
Sbjct: 340 TIQAICIAAYYRKEWPLLVVTPSSVRFTWAEAFRRWLPSLTPDSINVVV-KAKDSLRSG- 397
Query: 262 TIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATL 321
L NIISYD++ ++ + F ++I DESHFLKN + R A L
Sbjct: 398 ---------------LINIISYDLLSRMDKQQPGNPFNVLIMDESHFLKNMKTARCKAAL 442
Query: 322 PIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQG 378
P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P ++ HE+G RYC + +G Y G
Sbjct: 443 PLLKVAKRVILLSGTPAMSRPAELYTQILAVRPTLFPRFHEFGIRYCDARQMTWGWDYTG 502
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKG 438
+SN EL L++ +M+RRLK +VL+QLP K+R+ V + + + R AL
Sbjct: 503 SSNLGELKLLLEECLMLRRLKSEVLSQLPAKQRKVVTVTIDGINTRTKAALS-------- 554
Query: 439 KIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQP 497
A K + K EK + Y +AEAK+ A+++Y+ ++E G KFL+FAHH+
Sbjct: 555 --AAAKQLAKGHRNKMEEKEALLVFYNHTAEAKLQAIMEYITDMLECGREKFLVFAHHKL 612
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
+LD I KK V IRIDG TP A RQ L FQ AVLS+ A +GLTL +A
Sbjct: 613 VLDHITTELEKKNVDFIRIDGSTPSAERQQLCERFQYSAKTCVAVLSITAANMGLTLHSA 672
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
VIFAEL W PG LIQAEDR HRIGQ SSVN++YL+A T DD +W +++ K+ L QV
Sbjct: 673 DLVIFAELFWNPGVLIQAEDRVHRIGQTSSVNIHYLVAKGTADDHLWPMIQEKMNVLEQV 732
Query: 618 LDGHENSLEVS-SSQIRSSPAKQKTLDSFLKRCNNVDD 654
N E + ++ S Q+++ +R + DD
Sbjct: 733 GLSESNFSETAENTSFHSKDPTQRSIMEMFQRSFSEDD 770
>gi|426221165|ref|XP_004004781.1| PREDICTED: DNA annealing helicase and endonuclease ZRANB3 [Ovis
aries]
Length = 1077
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 199/478 (41%), Positives = 296/478 (61%), Gaps = 33/478 (6%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
E+ D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKT+QAI +A +++ WPVL
Sbjct: 24 EQLDFLPDKLRAKLLPFQKDGITFALRRDGRCMVADEMGLGKTVQAIGIAYFYKEEWPVL 83
Query: 221 ILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQL--GGSNRSGFTIVSSNTKRNIPLDGL 277
++ PSSLR W I++W+ + P EI V+ +++ G + S T++
Sbjct: 84 VVVPSSLRYPWTEEIEKWIPELSPEEINVIQNKIDVGRISTSKVTVLG------------ 131
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
+ +++ D L + L + NFK+VI DESH++K+ A R+ LPI++KA+ A+LL+GTP
Sbjct: 132 YGLLTADAET-LIDALNNQNFKVVIVDESHYMKSRSATRSRILLPIVQKAKRAILLTGTP 190
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMK 390
AL RP ELF Q+EAL+P + EY RYC V FG +GASN ELH L+
Sbjct: 191 ALGRPEELFMQIEALFPQKFGTWTEYAKRYCNAHVRYFGKRPQWDCRGASNLNELHQLL- 249
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQ 450
+ +MIRRLK +VL QLP K RQ++ D+ +++ + F E E + + +E
Sbjct: 250 SDIMIRRLKAEVLTQLPPKIRQRIPFDLPSAAAKELNSSFEEWEKLMRAPYSGATE---- 305
Query: 451 SLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKK 509
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++
Sbjct: 306 ----TVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIEN 361
Query: 510 KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTP 569
K IRIDG P + R LV +FQ+ + + A+LS++A G GLT TAA+ V+FAEL W P
Sbjct: 362 KTRYIRIDGSVPSSERIHLVNQFQKDPETRVAILSIQAAGQGLTFTAATHVVFAELYWDP 421
Query: 570 GDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
G + QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + L+
Sbjct: 422 GHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKLQA 479
>gi|260793856|ref|XP_002591926.1| hypothetical protein BRAFLDRAFT_184347 [Branchiostoma floridae]
gi|229277139|gb|EEN47937.1| hypothetical protein BRAFLDRAFT_184347 [Branchiostoma floridae]
Length = 563
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 213/556 (38%), Positives = 316/556 (56%), Gaps = 49/556 (8%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIA 151
Y L+ F+++P ++ + R+W+F L EK LS+I + ++ L PL + +
Sbjct: 17 YCAPLIEVFKQMPTKNYDMQTRVWSFE---LKDYEK-LSKIQKAQLPVQ-LTPLPKTVLT 71
Query: 152 S-----ASAAPDLREK------YDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGL 200
+ P+ E+ + + + L+PFQR GV FA+ GR+L+AD+MGL
Sbjct: 72 TFRNQLKGNMPEELERRVPEADLSGVEPRLVNTLMPFQRRGVNFAIWRNGRVLIADDMGL 131
Query: 201 GKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNI------------PPSEIVV 248
GKT+QA+ VA +R WP+LI+TPSSLRL WA ++ + + P ++
Sbjct: 132 GKTVQALCVAAYYRKEWPLLIVTPSSLRLTWAEILVDIILVSSHIIAPESLLSSPQICLL 191
Query: 249 VLSQLGGSNR-----SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIA 303
+S +R +I T ++ P G I SYD++++ + + ++++I
Sbjct: 192 FVSCFQAFHRWLPSVDAQSITVMLTGKDNPASGQVTITSYDLMVRCSQQIRARGYRVIIM 251
Query: 304 DESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEY 363
DESH LKN + RT A LP++K A LLLSGTPALSRP ELF QL A+ P ++ + HE+
Sbjct: 252 DESHVLKNFKTARTKAALPLLKAASRVLLLSGTPALSRPSELFTQLSAVEPRLFSSFHEF 311
Query: 364 GNRYCKGGVFGI---YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAE 420
G RYC+G Y G+ N +EL +++ VMIRRLKKDVL+QLP K+RQ V ++
Sbjct: 312 GIRYCEGKQTAFCWDYSGSCNMKELQLVLEERVMIRRLKKDVLSQLPAKQRQVVVMEPGA 371
Query: 421 KDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLE 480
+ + A E+ K K+ E ++ + + + ++A KIP + DY+
Sbjct: 372 VNTKSFNAAANEM------TKKHKNNAE-------QRGALLQYFNETALVKIPHIKDYVL 418
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
++EA KFL+FAHHQ +LD++ KK IRIDG TP RQ L +Q +D +
Sbjct: 419 DLLEADRKFLVFAHHQIVLDSLRDALDKKGYGYIRIDGKTPSDIRQQLCDRYQTQDSCQV 478
Query: 541 AVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
A+LS+ A GLTLTAAS V+F EL W PG L+QAEDRAHRIGQ VNV+YL+A T D
Sbjct: 479 ALLSITAASTGLTLTAASLVVFTELFWNPGVLVQAEDRAHRIGQQDCVNVHYLVARGTAD 538
Query: 601 DIVWDVVRSKLENLGQ 616
D +W +V+ KL+ L +
Sbjct: 539 DYIWPLVQGKLDVLSK 554
>gi|297669378|ref|XP_002812876.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily a-like 1 isoform 2
[Pongo abelii]
gi|297669380|ref|XP_002812877.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily a-like 1 isoform 3
[Pongo abelii]
Length = 954
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 230/595 (38%), Positives = 340/595 (57%), Gaps = 49/595 (8%)
Query: 71 VPKLSV---KFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEK 127
P LS + L + A +Y L++ F+++ ++ K R W+F L K
Sbjct: 325 APSLSFVKGRCMLTSRAYFEADISYSQDLIALFKQMDSRRYDVKTRKWSF---LLEEHNK 381
Query: 128 VLSEISGY-NVEIENLHPLVQRAIASA------SAAPDLRE-KYDQIPAHIESKLLPFQR 179
+++++ V+++ L + A AS S PD+ E ++ + S L+PFQR
Sbjct: 382 LIAKVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQR 441
Query: 180 DGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL 239
GV FA+ GGR+LLAD+MGLGKTIQAI +A +R WP+L++ PSS+R W +WL
Sbjct: 442 AGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWL 501
Query: 240 -NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNF 298
++ P I VV++ G +R GL NI+S+D++ KL+ L + F
Sbjct: 502 PSLSPDCINVVVT---GKDRL--------------TAGLINIVSFDLLSKLEKQLKTP-F 543
Query: 299 KIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYK 358
K+VI DESHFLKN++ R A +P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P +
Sbjct: 544 KVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFP 603
Query: 359 NVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVF 415
H +G RYC K +G Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V
Sbjct: 604 QFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVV 663
Query: 416 LDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAV 475
+ + R AL + + K K K +K+ + + +AEAKIP+V
Sbjct: 664 IAPGRINARTRAALDAAAKEMTTKDKT----------KQQQKDALILFFNRTAEAKIPSV 713
Query: 476 LDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE 534
++Y+ ++E+G KFL+FAHH+ +LDAI Q +K V IRIDG T A R+ L +FQ
Sbjct: 714 IEYILDLLESGREKFLVFAHHKVVLDAITQELGRKHVQHIRIDGSTSSAEREDLCQQFQL 773
Query: 535 KDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLL 594
+ AVLS+ A +GLT ++A V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+
Sbjct: 774 SERHAVAVLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLV 833
Query: 595 ANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
A T DD +W +++ K++ L + N E++ S + P +QK D F K
Sbjct: 834 AKGTADDYLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYQDPKQQKIYDLFQK 888
>gi|348552612|ref|XP_003462121.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Cavia porcellus]
Length = 916
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 246/665 (36%), Positives = 357/665 (53%), Gaps = 66/665 (9%)
Query: 7 WEFSAEELDFLEREALQQIAQRHSKPFSDSPSYKVEALPQGSRTLPLSVAPAPKGSLGDF 66
W FS + AL + AQR S + P V+ +G LPL AP SLG F
Sbjct: 249 WNFSMADYS-----ALMRAAQRLST-VALQPLEGVDGSSEGQTGLPL----AP--SLG-F 295
Query: 67 SKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAE 126
K Q L + K Y L++ F+++ ++ R W+F L
Sbjct: 296 VKGQC-------ILISRARFEVKINYSENLIALFKQMDSRKYDVTTRKWSF---LLEEHN 345
Query: 127 KVLSEISGY-NVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIE-------SKLLPFQ 178
K++++ V++E L + A AS L + D A + S L+PFQ
Sbjct: 346 KLVAQARALPQVQLEPLPKTLTLAFASQLEKTSLCLQADVPEADLSGVDDKLVSNLMPFQ 405
Query: 179 RDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQW 238
R GV FA+ GR+LLAD+MGLGKTIQAI +A +R WP+L++TPSS+R W +W
Sbjct: 406 RVGVNFAIAKRGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVTPSSVRFTWEQAFLRW 465
Query: 239 L-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSN 297
L ++ P + VV++ G GL NI+S+D++ KL+ L +S
Sbjct: 466 LPSLRPENVNVVVNGKGSLTA-----------------GLVNIVSFDLLSKLERQLKTS- 507
Query: 298 FKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVY 357
K+VI DESHFLKN++ R A +PI+K A+ A+LLSGTPA+SRP EL+ Q+ A+ P +
Sbjct: 508 VKVVIIDESHFLKNSKTARCRAAMPILKGAKRAILLSGTPAMSRPAELYTQIIAVKPTFF 567
Query: 358 KNVHEYGNRYCKGGVFGI---YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQV 414
H +G RYC Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V
Sbjct: 568 PQFHAFGLRYCDAKRLQWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKMV 627
Query: 415 FLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPA 474
+ A R + + A E K +K + + +AEAKIP
Sbjct: 628 -----------VVAPGRISAKARASLDAAAKEMTKDKTKQQQKEALILFFNRTAEAKIPC 676
Query: 475 VLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQ 533
V++Y+ ++E+G KFL+FAHH+ +LDAI + +K V IRIDG TP A R+ L +FQ
Sbjct: 677 VIEYILDLLESGREKFLVFAHHKMVLDAITKELERKHVPHIRIDGSTPSAEREDLCQQFQ 736
Query: 534 EKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYL 593
+ AVLS+ A +GLT ++A V+FAEL W PG LIQAEDR HRIGQ SSV ++YL
Sbjct: 737 LSERHAVAVLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYL 796
Query: 594 LANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKRCNNVD 653
+A T DD +W +++ K++ LG+ N E++ + P KQ+T+ L++ D
Sbjct: 797 VARGTADDYLWPLIQEKIKVLGEAGLSETNFSEMTEAASYKDP-KQQTIYDLLQKSFEED 855
Query: 654 DSEHQ 658
++ +
Sbjct: 856 GTDME 860
>gi|6102878|emb|CAB59251.1| hypothetical protein [Homo sapiens]
Length = 808
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 226/575 (39%), Positives = 332/575 (57%), Gaps = 46/575 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A +Y L++ F+++ ++ K R W+F L K+++++ V+++ L +
Sbjct: 199 ADISYSQDLIALFKQMDSRRYDVKTRKWSF---LLEEHSKLIAKVRCLPQVQLDPLPTTL 255
Query: 147 QRAIASA------SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS S PD+ E ++ + S L+PFQR GV FA+ GGR+LLAD+MG
Sbjct: 256 TLAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMG 315
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G +R
Sbjct: 316 LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVT---GKDR 372
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN++ R
Sbjct: 373 L--------------TAGLINIVSFDLLSKLEKQL-KTPFKVVIIDESHFLKNSRTARCR 417
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G
Sbjct: 418 AAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWD 477
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V + + R AL
Sbjct: 478 YSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAAL------ 531
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
A K K +K+ + + +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 532 ----DAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAH 587
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +LDAI Q +K V IRIDG T A R+ L +FQ + AVLS+ A +GLT
Sbjct: 588 HKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF 647
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
++A V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ L
Sbjct: 648 SSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVL 707
Query: 615 GQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
+ N E++ S + P +QK D F K
Sbjct: 708 AEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQK 742
>gi|21071060|ref|NP_054859.2| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Homo sapiens]
gi|187761314|ref|NP_001120679.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Homo sapiens]
gi|60390962|sp|Q9NZC9.1|SMAL1_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1;
AltName: Full=HepA-related protein; Short=hHARP;
AltName: Full=Sucrose nonfermenting protein 2-like 1
gi|18463933|gb|AAL73034.1|AF432223_1 SMARCAL1 [Homo sapiens]
gi|7861961|gb|AAF70454.1| HARP [Homo sapiens]
gi|27696616|gb|AAH43341.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a-like 1 [Homo sapiens]
gi|62702171|gb|AAX93097.1| unknown [Homo sapiens]
gi|119590973|gb|EAW70567.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a-like 1 [Homo sapiens]
Length = 954
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 226/575 (39%), Positives = 334/575 (58%), Gaps = 46/575 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A +Y L++ F+++ ++ K R W+F L K+++++ V+++ L +
Sbjct: 345 ADISYSQDLIALFKQMDSRRYDVKTRKWSF---LLEEHSKLIAKVRCLPQVQLDPLPTTL 401
Query: 147 QRAIASA------SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS S PD+ E ++ + S L+PFQR GV FA+ GGR+LLAD+MG
Sbjct: 402 TLAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMG 461
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G +R
Sbjct: 462 LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVT---GKDR 518
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN++ R
Sbjct: 519 L--------------TAGLINIVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNSRTARCR 563
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G
Sbjct: 564 AAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWD 623
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V + + R AL +
Sbjct: 624 YSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAALDAAAKE 683
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
+ K K K +K+ + + +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 684 MTTKDKT----------KQQQKDALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAH 733
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +LDAI Q +K V IRIDG T A R+ L +FQ + AVLS+ A +GLT
Sbjct: 734 HKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF 793
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
++A V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ L
Sbjct: 794 SSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVL 853
Query: 615 GQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
+ N E++ S + P +QK D F K
Sbjct: 854 AEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQK 888
>gi|16741295|gb|AAH16482.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a-like 1 [Homo sapiens]
gi|123981668|gb|ABM82663.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a-like 1 [synthetic construct]
gi|123996475|gb|ABM85839.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a-like 1 [synthetic construct]
Length = 954
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 226/575 (39%), Positives = 334/575 (58%), Gaps = 46/575 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A +Y L++ F+++ ++ K R W+F L K+++++ V+++ L +
Sbjct: 345 ADISYSQDLIALFKQMDSRRYDVKTRKWSF---LLQEHSKLIAKVRCLPQVQLDPLPTTL 401
Query: 147 QRAIASA------SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS S PD+ E ++ + S L+PFQR GV FA+ GGR+LLAD+MG
Sbjct: 402 TLAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMG 461
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G +R
Sbjct: 462 LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVT---GKDR 518
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN++ R
Sbjct: 519 L--------------TAGLINIVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNSRTARCR 563
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G
Sbjct: 564 AAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWD 623
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V + + R AL +
Sbjct: 624 YSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAALDAAAKE 683
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
+ K K K +K+ + + +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 684 MTTKDKT----------KQQQKDALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAH 733
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +LDAI Q +K V IRIDG T A R+ L +FQ + AVLS+ A +GLT
Sbjct: 734 HKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF 793
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
++A V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ L
Sbjct: 794 SSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVL 853
Query: 615 GQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
+ N E++ S + P +QK D F K
Sbjct: 854 AEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQK 888
>gi|6693791|gb|AAF24984.1|AF082179_1 HepA-related protein HARP [Homo sapiens]
Length = 954
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 226/575 (39%), Positives = 334/575 (58%), Gaps = 46/575 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A +Y L++ F+++ ++ K R W+F L K+++++ V+++ L +
Sbjct: 345 ADISYSQDLIALFKQMDSRRYDVKTRKWSF---LLEEHSKLIAKVRCLPQVQLDPLPTTL 401
Query: 147 QRAIASA------SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS S PD+ E ++ + S L+PFQR GV FA+ GGR+LLAD+MG
Sbjct: 402 TLAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMG 461
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G +R
Sbjct: 462 LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVT---GKDR 518
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN++ R
Sbjct: 519 L--------------TAGLINIVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNSRTARCR 563
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G
Sbjct: 564 AAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWD 623
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V + + R AL +
Sbjct: 624 YSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAALDAAAKE 683
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
+ K K K +K+ + + +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 684 MTTKDKT----------KQQQKDALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAH 733
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +LDAI Q +K V IRIDG T A R+ L +FQ + AVLS+ A +GLT
Sbjct: 734 HKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF 793
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
++A V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ L
Sbjct: 794 SSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVL 853
Query: 615 GQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
+ N E++ S + P +QK D F K
Sbjct: 854 AEAGLSETNFSEMTESTDYLYKDPKQQKMYDLFQK 888
>gi|7019996|dbj|BAA90955.1| unnamed protein product [Homo sapiens]
Length = 619
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 226/575 (39%), Positives = 332/575 (57%), Gaps = 46/575 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A +Y L++ F+++ ++ K R W+F L K+++++ V+++ L +
Sbjct: 10 ADISYSQDLIALFKQMDSRRYDVKTRKWSF---LLQEHSKLIAKVRCLPQVQLDPLPTTL 66
Query: 147 QRAIASA------SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS S PD+ E ++ + S L+PFQR GV FA+ GGR+LLAD+MG
Sbjct: 67 TLAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMG 126
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G +R
Sbjct: 127 LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVT---GKDR 183
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN++ R
Sbjct: 184 LT--------------AGLINIVSFDLLSKLEKQL-KTPFKVVIIDESHFLKNSRTARCR 228
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G
Sbjct: 229 AAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWD 288
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V + + R AL
Sbjct: 289 YSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAAL------ 342
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
A K K +K+ + + +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 343 ----DAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAH 398
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +LDAI Q +K V IRIDG T A R+ L +FQ + AVLS+ A +GLT
Sbjct: 399 HKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF 458
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
++A V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ L
Sbjct: 459 SSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVL 518
Query: 615 GQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
+ N E++ S + P +QK D F K
Sbjct: 519 AEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQK 553
>gi|354471091|ref|XP_003497777.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3
[Cricetulus griseus]
Length = 1069
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/474 (41%), Positives = 298/474 (62%), Gaps = 29/474 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAIAVA +++ WP+LI+
Sbjct: 27 DFLPYKLREKLLPFQKDGIIFALRRDGRCMVADEMGLGKTIQAIAVAYFYKEEWPMLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W +++W+ + P +I +++ N++ F +S++ + + G + +I+
Sbjct: 87 PSSLRYPWTEELEKWIPELEPEDINIIM------NKTDFGRISTS---RVTVLG-YGLIT 136
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
D L N L S NF++VI DESH++K+ A R+ LP++++A+ A+LL+GTPAL RP
Sbjct: 137 TDAET-LMNALNSQNFQVVIVDESHYMKSRTAARSKLLLPLVQRARRAILLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q+EAL+P + EY RYC + FG +GASN ELH L+ + +MI
Sbjct: 196 EELFMQIEALFPQKFGTWIEYAKRYCNAHIRYFGKRRQWDCRGASNLGELHQLL-SDIMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +VL+QLP K RQ++ D+ ++++ A F E + + + E T
Sbjct: 255 RRLKSEVLSQLPPKVRQRIPFDLPPAAVKELNASFEEWQKLMRAPNSGAME--------T 306
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIE-AGCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
LI ++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K I
Sbjct: 307 VMGLITCMFKQTAIAKAGAVKDYIKMLLQNESLKFLVFAHHLSMLQACTEAVIENKTRYI 366
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDG P + R LV +FQ+ + + A+LS++A G GLT TAAS V+FAEL W PG + Q
Sbjct: 367 RIDGSVPSSERIHLVNQFQKDPNTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQ 426
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
AEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + L+ +
Sbjct: 427 AEDRAHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKERLQAT 480
>gi|26351357|dbj|BAC39315.1| unnamed protein product [Mus musculus]
Length = 616
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 200/476 (42%), Positives = 296/476 (62%), Gaps = 33/476 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAIA+A +++ WP+LI+
Sbjct: 27 DFLPDKLRTKLLPFQKDGIVFALRRDGRCMVADEMGLGKTIQAIAIAYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQ--LGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
PSSLR W +++W+ + P EI VV+++ +G S T++ + +
Sbjct: 87 PSSLRYPWIEELEKWIPELEPEEINVVMNKTDIGRIPGSRVTVLG------------YGL 134
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
++ D L + L + NF++VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL
Sbjct: 135 LTTDAE-TLLDALNTQNFRVVIVDESHYMKSRTAARSKILLPMVQKARRAILLTGTPALG 193
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATV 393
RP ELF Q+EAL+P + EY RYC V FG +GASN ELH L+ +
Sbjct: 194 RPEELFMQIEALFPQKFGTWIEYAKRYCNAHVRYFGKRRQWDCRGASNLSELHQLLN-DI 252
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL+QLP K RQ++ D+ ++++ A F E + + + E
Sbjct: 253 MIRRLKSEVLSQLPPKVRQRIPFDLPPAAVKELNASFEEWQKLMRAPNSGAME------- 305
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 306 -TVMGLITRMFKQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSR 364
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG P + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG +
Sbjct: 365 YIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHI 424
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + L+ +
Sbjct: 425 KQAEDRAHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKLQAT 480
>gi|426338524|ref|XP_004033228.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1
isoform 1 [Gorilla gorilla gorilla]
gi|426338526|ref|XP_004033229.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1
isoform 2 [Gorilla gorilla gorilla]
Length = 954
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 226/575 (39%), Positives = 333/575 (57%), Gaps = 46/575 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A +Y L++ F+++ ++ K R W+F L K+++++ V ++ L +
Sbjct: 345 ADISYSQDLIALFKQMDSRRYDVKTRKWSF---LLEEHSKLIAKVRCLPQVRLDPLPTTL 401
Query: 147 QRAIASA------SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS S PD+ E ++ + S L+PFQR GV FA+ GGR+LLAD+MG
Sbjct: 402 TLAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMG 461
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G +R
Sbjct: 462 LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVT---GKDR 518
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN++ R
Sbjct: 519 L--------------TAGLINIVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNSRTARCR 563
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G
Sbjct: 564 AAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWD 623
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V + + R AL +
Sbjct: 624 YSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAALDAAAKE 683
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
+ K K K +K+ + + +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 684 MTTKDKT----------KQQQKDALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAH 733
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +LDAI Q +K V IRIDG T A R+ L +FQ + AVLS+ A +GLT
Sbjct: 734 HKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF 793
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
++A V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ L
Sbjct: 794 SSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVL 853
Query: 615 GQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
+ N E++ S + P +QK D F K
Sbjct: 854 AEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQK 888
>gi|256073537|ref|XP_002573086.1| harp (smarcal1)-related [Schistosoma mansoni]
gi|353232452|emb|CCD79807.1| harp (smarcal1)-related [Schistosoma mansoni]
Length = 695
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 224/624 (35%), Positives = 346/624 (55%), Gaps = 49/624 (7%)
Query: 58 APKGSLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTF 117
P+ + D + + +V L ++ Y L F+ + ++++ R W+F
Sbjct: 56 TPQSTPNDAFRPKTSLANVLCTLCSANRFEVHARYHVGLTQLFKSMDSKQYDSQTRRWSF 115
Query: 118 PVPFLSSAEKVLSEISGYNVE--IENLHPLVQRAIASASAAPDLREK-----------YD 164
+ + K + I ++E + + ++ I+ A DL++ D
Sbjct: 116 DLSEYNEFVKKVKNIDELHLEELPYAVIKIFRKRISMKPGADDLKDHDNNDEIDHSTLKD 175
Query: 165 QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTP 224
+IP + + L PFQ+DGV AL+ GR+LLAD+MGLGKTIQ++A+A+ + WP+LI+TP
Sbjct: 176 RIPDDLLATLFPFQKDGVCLALKRSGRVLLADDMGLGKTIQSLAIASAYYSEWPLLIITP 235
Query: 225 SSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL----FNI 280
SS+R W I +WL P + N + T+V+S D I
Sbjct: 236 SSVRFSWRDQIIRWLGKPLN-----------LNLTHITVVNSGKDIMDDWDSFNSSPITI 284
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
ISYD++ + L+ + +VIADESHF+KN +A RT A PI+K A+ +LLSGTPA+S
Sbjct: 285 ISYDLMSRYGKELLKRRYGVVIADESHFIKNIKAARTKAATPILKWAKRVILLSGTPAMS 344
Query: 341 RPIELFKQLEALYPDVYKN-VHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVMIR 396
RP ELF Q+ A+ P++++ HE+G RYC K +G Y G SN EL +++ ++MIR
Sbjct: 345 RPAELFPQISAISPNLFQGGFHEFGLRYCSAKECPWGWDYSGCSNMTELQLVLEKSIMIR 404
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTE 456
R+K DVL+QLP KRR+ V LD + + KG + L E
Sbjct: 405 RVKADVLSQLPPKRRELVVLDPSV--------------IKKGNLGRHAKTMLTDKLSSKE 450
Query: 457 K-NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
K + + + + ++ K+PA+ Y+ +IE G KFL+FAHH +LD++ +L +K + IR
Sbjct: 451 KRSALFEYFHETGSVKLPAIEQYVLDLIECGHKFLLFAHHTDVLDSLDKLLSEKSIRFIR 510
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
IDG T R + FQ++DD + A+LS+ A G GL LTAA+ VIFAEL W PG L+QA
Sbjct: 511 IDGRTNSEQRSVVCQIFQKEDDCRVALLSITAAGTGLHLTAANLVIFAELFWNPGALVQA 570
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV-LDGHENSLEVSSSQIRS 634
EDRA+RIGQ+ SV + YL+A T DD +W +V KL+ L + L+ + S++++ S
Sbjct: 571 EDRAYRIGQMDSVLIRYLIAEQTADDFIWPLVERKLDVLSKAGLNRETFRMADSTTRLGS 630
Query: 635 SP-AKQKTLDSFLKRCNNVDDSEH 657
+ +QK LD F K N+ ++ E+
Sbjct: 631 NTLEQQKILDYFKKELNDFEEWEN 654
>gi|332210006|ref|XP_003254102.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1
isoform 1 [Nomascus leucogenys]
gi|332210008|ref|XP_003254103.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1
isoform 2 [Nomascus leucogenys]
Length = 954
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 249/662 (37%), Positives = 364/662 (54%), Gaps = 71/662 (10%)
Query: 7 WEFSAEELDFLEREALQQIAQRHSKPF------SDSPSYKVEALPQGSRTLPLSVAPAPK 60
W FS + L + A Q + + +P S+SPS E G LPL AP
Sbjct: 277 WNFSMNDYSALMKAA-QSLPTVNLQPLEWAYGGSESPSTSSE----GQAGLPL----APS 327
Query: 61 GSLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVP 120
S F K + +S +F A +Y L+ F+++ ++ K R W+F
Sbjct: 328 LS---FVKGRCMLISRAYF-------EADISYSQDLIVLFKQMDSRRYDVKTRKWSF--- 374
Query: 121 FLSSAEKVLSEISGY-NVEIENLHPLVQRAIASA------SAAPDLRE-KYDQIPAHIES 172
L K++++ V+++ L + A AS S PD+ E ++ + S
Sbjct: 375 LLEEHSKLIAKARCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDVPEADLSEVDPKLVS 434
Query: 173 KLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWA 232
L+PFQR GV FA+ GGR+LLAD+MGLGKTIQAI +A +R WP+L++ PSS+R W
Sbjct: 435 NLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWE 494
Query: 233 AMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQN 291
+WL ++ P I VV++ G +R GL NI+S+D++ KL+
Sbjct: 495 QAFLRWLPSLSPDCINVVVT---GKDRL--------------TAGLINIVSFDLLSKLEK 537
Query: 292 ILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEA 351
L + FK+VI DESHFLKN++ R A +P++K A+ +LLSGTPA+SRP EL+ Q+ A
Sbjct: 538 QLKTP-FKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIA 596
Query: 352 LYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPV 408
+ P + H +G RYC K +G Y G+SN EL L++ VM+RRLK DVL+QLP
Sbjct: 597 VKPTFFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPA 656
Query: 409 KRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSA 468
K+R+ V + + R AL + + K K K +K+ + + +A
Sbjct: 657 KQRKIVVIAPGRINARTRAALDAAAKEMTTKDKT----------KQQQKDALILFFNRTA 706
Query: 469 EAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQA 527
EAKIP+V++Y+ ++E+G KFL+FAHH+ +LDAI Q +K V IRIDG T A R+
Sbjct: 707 EAKIPSVIEYILDLLESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAERED 766
Query: 528 LVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSS 587
L +FQ + AVLS+ A +GLT ++A V+FAEL W PG LIQAEDR HRIGQ SS
Sbjct: 767 LCQQFQLSERHAVAVLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSS 826
Query: 588 VNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSF 645
V ++YL+A T DD +W +++ K++ L + N E++ S + P +QK D F
Sbjct: 827 VGIHYLVAKGTADDYLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLF 886
Query: 646 LK 647
K
Sbjct: 887 QK 888
>gi|148707810|gb|EDL39757.1| mCG13937, isoform CRA_a [Mus musculus]
Length = 1073
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/476 (42%), Positives = 296/476 (62%), Gaps = 33/476 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAIA+A +++ WP+LI+
Sbjct: 31 DFLPDKLRTKLLPFQKDGIVFALRRDGRCMVADEMGLGKTIQAIAIAYFYKEEWPLLIVV 90
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQ--LGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
PSSLR W +++W+ + P EI VV+++ +G S T++ + +
Sbjct: 91 PSSLRYPWIEELEKWIPELEPEEINVVMNKTDIGRIPGSRVTVLG------------YGL 138
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
++ D L + L + NF++VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL
Sbjct: 139 LTTDAET-LLDALNTQNFRVVIVDESHYMKSRTAARSKILLPMVQKARRAILLTGTPALG 197
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATV 393
RP ELF Q+EAL+P + EY RYC V FG +GASN ELH L+ +
Sbjct: 198 RPEELFMQIEALFPQKFGTWIEYAKRYCNAHVRYFGKRRQWDCRGASNLSELHQLLN-DI 256
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL+QLP K RQ++ D+ ++++ A F E + + + E
Sbjct: 257 MIRRLKSEVLSQLPPKVRQRIPFDLPPAAVKELNASFEEWQKLMRAPNSGAME------- 309
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 310 -TVMGLITRMFKQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSR 368
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG P + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG +
Sbjct: 369 YIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHI 428
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + L+ +
Sbjct: 429 KQAEDRAHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKLQAT 484
>gi|109100917|ref|XP_001086469.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily a-like 1 isoform 2
[Macaca mulatta]
gi|109100919|ref|XP_001086594.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily a-like 1 isoform 3
[Macaca mulatta]
Length = 949
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 226/575 (39%), Positives = 332/575 (57%), Gaps = 46/575 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A Y L++ F+++ ++ K R W+F L K+++++ V+++ L +
Sbjct: 340 ADIGYSQDLIALFKQMDSRRYDVKTRKWSF---LLEEHSKLIAKVRCLPQVQLDPLPTTL 396
Query: 147 QRAIASA------SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS S APD+ E + + S L+PFQR GV FA+ GGR+LLAD+MG
Sbjct: 397 TLAFASQLKKTSLSLAPDVPEADLSGVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMG 456
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G +R
Sbjct: 457 LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVT---GKDR 513
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN++ R
Sbjct: 514 L--------------TAGLINIVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNSRTARCR 558
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G
Sbjct: 559 AAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWD 618
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V + + R AL
Sbjct: 619 YSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAAL------ 672
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
A K + K +K+ + + +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 673 ----DAAAKEMTTMDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAH 728
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +LDAI Q +K V IRIDG T A R+ L +FQ + AVLS+ A +GLT
Sbjct: 729 HKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF 788
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
++A V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ L
Sbjct: 789 SSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVL 848
Query: 615 GQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
+ N E++ S + P +Q+ D F K
Sbjct: 849 AEAGLSETNFSEMTESTDYLYKDPKQQQIYDLFQK 883
>gi|114583210|ref|XP_001153008.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily a-like 1 isoform 3
[Pan troglodytes]
gi|114583212|ref|XP_001153124.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily a-like 1 isoform 5
[Pan troglodytes]
gi|410207532|gb|JAA00985.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a-like 1 [Pan troglodytes]
gi|410263512|gb|JAA19722.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a-like 1 [Pan troglodytes]
gi|410292742|gb|JAA24971.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a-like 1 [Pan troglodytes]
gi|410328995|gb|JAA33444.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a-like 1 [Pan troglodytes]
Length = 954
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 226/575 (39%), Positives = 334/575 (58%), Gaps = 46/575 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A +Y L++ F+++ ++ K R W+F L K+++++ V+++ L +
Sbjct: 345 ADISYSQDLIALFKQMDSRRYDVKTRKWSF---LLEEHSKLIAKVRCLPQVQLDPLPMTL 401
Query: 147 QRAIASA------SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS S PD+ E ++ + S L+PFQR GV FA+ GGR+LLAD+MG
Sbjct: 402 TLAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMG 461
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G +R
Sbjct: 462 LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVT---GKDR 518
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN++ R
Sbjct: 519 L--------------TAGLINIVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNSRTARCR 563
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G
Sbjct: 564 AAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWD 623
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V + + R AL +
Sbjct: 624 YSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAALDAAAKE 683
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
+ K K K +K+ + + +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 684 MTTKDKT----------KQQQKDALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAH 733
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +LDAI Q +K V IRIDG T A R+ L +FQ + AVLS+ A +GLT
Sbjct: 734 HKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF 793
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
++A V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ L
Sbjct: 794 SSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVL 853
Query: 615 GQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
+ N E++ S + P +QK D F K
Sbjct: 854 AEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQK 888
>gi|109730809|gb|AAI17923.1| Zinc finger, RAN-binding domain containing 3 [Mus musculus]
gi|109731403|gb|AAI17922.1| Zranb3 protein [Mus musculus]
Length = 1069
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/476 (42%), Positives = 296/476 (62%), Gaps = 33/476 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAIA+A +++ WP+LI+
Sbjct: 27 DFLPDKLRTKLLPFQKDGIVFALRRDGRCMVADEMGLGKTIQAIAIAYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQ--LGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
PSSLR W +++W+ + P EI VV+++ +G S T++ + +
Sbjct: 87 PSSLRYPWIEELEKWIPELEPEEINVVMNKTDIGRIPGSRVTVLG------------YGL 134
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
++ D L + L + NF++VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL
Sbjct: 135 LTTDAET-LLDALNTQNFRVVIVDESHYMKSRTAARSKILLPMVQKARRAILLTGTPALG 193
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATV 393
RP ELF Q+EAL+P + EY RYC V FG +GASN ELH L+ +
Sbjct: 194 RPEELFMQIEALFPQKFGTWIEYAKRYCNAHVRYFGKRRQWDCRGASNLSELHQLLN-DI 252
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL+QLP K RQ++ D+ ++++ A F E + + + E
Sbjct: 253 MIRRLKSEVLSQLPPKVRQRIPFDLPPAAVKELNASFEEWQKLMRAPNSGAME------- 305
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 306 -TVMGLITRMFKQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSR 364
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG P + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG +
Sbjct: 365 YIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHI 424
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + L+ +
Sbjct: 425 KQAEDRAHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKLQAT 480
>gi|124430705|ref|NP_081954.1| DNA annealing helicase and endonuclease ZRANB3 [Mus musculus]
gi|81885066|sp|Q6NZP1.1|ZRAB3_MOUSE RecName: Full=DNA annealing helicase and endonuclease ZRANB3;
AltName: Full=Annealing helicase 2; Short=AH2; AltName:
Full=Zinc finger Ran-binding domain-containing protein
3; Includes: RecName: Full=DNA annealing helicase
ZRANB3; Includes: RecName: Full=Endonuclease ZRANB3
gi|42406402|gb|AAH66035.1| Zinc finger, RAN-binding domain containing 3 [Mus musculus]
Length = 1069
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/476 (42%), Positives = 296/476 (62%), Gaps = 33/476 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAIA+A +++ WP+LI+
Sbjct: 27 DFLPDKLRTKLLPFQKDGIVFALRRDGRCMVADEMGLGKTIQAIAIAYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQ--LGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
PSSLR W +++W+ + P EI VV+++ +G S T++ + +
Sbjct: 87 PSSLRYPWIEELEKWIPELEPEEINVVMNKTDIGRIPGSRVTVLG------------YGL 134
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
++ D L + L + NF++VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL
Sbjct: 135 LTTDAET-LLDALNTQNFRVVIVDESHYMKSRTAARSKILLPMVQKARRAILLTGTPALG 193
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATV 393
RP ELF Q+EAL+P + EY RYC V FG +GASN ELH L+ +
Sbjct: 194 RPEELFMQIEALFPQKFGTWIEYAKRYCNAHVRYFGKRRQWDCRGASNLSELHQLLN-DI 252
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL+QLP K RQ++ D+ ++++ A F E + + + E
Sbjct: 253 MIRRLKSEVLSQLPPKVRQRIPFDLPPAAVKELNASFEEWQKLMRAPNSGAME------- 305
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 306 -TVMGLITRMFKQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSR 364
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG P + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG +
Sbjct: 365 YIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHI 424
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + L+ +
Sbjct: 425 KQAEDRAHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKLQAT 480
>gi|297471769|ref|XP_002685457.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3 [Bos
taurus]
gi|358410961|ref|XP_003581888.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3 [Bos
taurus]
gi|408407572|sp|E1BB03.3|ZRAB3_BOVIN RecName: Full=DNA annealing helicase and endonuclease ZRANB3;
AltName: Full=Annealing helicase 2; Short=AH2; AltName:
Full=Zinc finger Ran-binding domain-containing protein
3; Includes: RecName: Full=DNA annealing helicase
ZRANB3; Includes: RecName: Full=Endonuclease ZRANB3
gi|296490526|tpg|DAA32639.1| TPA: zinc finger, RAN-binding domain containing 3 [Bos taurus]
Length = 1074
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 199/476 (41%), Positives = 294/476 (61%), Gaps = 29/476 (6%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
++ D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKT+QAI +A +++ WP+L
Sbjct: 24 KQLDFLPDKLRAKLLPFQKDGITFALRRDGRCMVADEMGLGKTVQAIGIAYFYKEEWPLL 83
Query: 221 ILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
I+ PSSLR W I++W+ + P EI V+ N++ +S+ +K + GL
Sbjct: 84 IVVPSSLRYPWTEEIEKWIPELSPEEINVI------QNKTDVGRIST-SKVTVLGYGLLT 136
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
+ ++ L N NFK+VI DESH++K+ A R+ LPI++KA+ A+LL+GTPAL
Sbjct: 137 TDAETLIDALNN----QNFKVVIVDESHYMKSRSATRSRILLPIVQKAKRAILLTGTPAL 192
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKAT 392
RP ELF Q+EAL+P + EY RYC V FG +GASN ELH L+ +
Sbjct: 193 GRPEELFMQIEALFPQKFGTWTEYAKRYCNAHVRYFGRRSQWDCRGASNLNELHQLL-SD 251
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL 452
+MIRRLK +VL QLP K RQ++ D+ +++ + F E E + + +E
Sbjct: 252 IMIRRLKTEVLTQLPPKIRQRIPFDLPSAAAKELNSSFEEWEKLMRDPYSGATE------ 305
Query: 453 KFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKV 511
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 306 --TVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKT 363
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
IRIDG P + R LV +FQ+ + + A+LS++A G GLT TAA+ V+FAEL W PG
Sbjct: 364 RYIRIDGSVPSSERIHLVNQFQKDPETRVAILSIQAAGQGLTFTAATHVVFAELYWDPGH 423
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
+ QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + L+
Sbjct: 424 IKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKLQA 479
>gi|148707811|gb|EDL39758.1| mCG13937, isoform CRA_b [Mus musculus]
Length = 1097
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/476 (42%), Positives = 296/476 (62%), Gaps = 33/476 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAIA+A +++ WP+LI+
Sbjct: 55 DFLPDKLRTKLLPFQKDGIVFALRRDGRCMVADEMGLGKTIQAIAIAYFYKEEWPLLIVV 114
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQ--LGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
PSSLR W +++W+ + P EI VV+++ +G S T++ + +
Sbjct: 115 PSSLRYPWIEELEKWIPELEPEEINVVMNKTDIGRIPGSRVTVLG------------YGL 162
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
++ D L + L + NF++VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL
Sbjct: 163 LTTDAET-LLDALNTQNFRVVIVDESHYMKSRTAARSKILLPMVQKARRAILLTGTPALG 221
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATV 393
RP ELF Q+EAL+P + EY RYC V FG +GASN ELH L+ +
Sbjct: 222 RPEELFMQIEALFPQKFGTWIEYAKRYCNAHVRYFGKRRQWDCRGASNLSELHQLLN-DI 280
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL+QLP K RQ++ D+ ++++ A F E + + + E
Sbjct: 281 MIRRLKSEVLSQLPPKVRQRIPFDLPPAAVKELNASFEEWQKLMRAPNSGAME------- 333
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 334 -TVMGLITRMFKQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSR 392
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG P + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG +
Sbjct: 393 YIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHI 452
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + L+ +
Sbjct: 453 KQAEDRAHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKLQAT 508
>gi|395519477|ref|XP_003763875.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3
[Sarcophilus harrisii]
Length = 1087
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 198/474 (41%), Positives = 295/474 (62%), Gaps = 29/474 (6%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
+P + ++LLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAIA+A +++ WP+LI+ PS
Sbjct: 29 LPEKLRARLLPFQKDGITFALKRDGRCMVADEMGLGKTIQAIAIAYFYKNEWPLLIVVPS 88
Query: 226 SLRLHWAAMIQQWL-NIPPSEIVVVLSQ--LGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
SLR W I++W+ + P EI+++ ++ +G + S T++ + +++
Sbjct: 89 SLRYPWTEEIEKWIPELGPHEIIIIQNKTDVGRISTSKVTVLG------------YGLLT 136
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
D L L + L NFK+VI DESH++K+ A R+ LP+++ ++ A+LL+GTPAL RP
Sbjct: 137 TDAKL-LIDTLYKQNFKVVIIDESHYMKSRNASRSKILLPVVQNSRRAILLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q++AL+P + EY RYC + FG +GASN ELH L+ + +MI
Sbjct: 196 EELFMQIDALFPKQFGTWTEYAKRYCNAHIRYFGKRAQWDCRGASNLNELHQLL-SNIMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKS-EEEVQSLKF 454
RRLK +VL QLP K RQ++ D+ +++ F E E + I+A S E S F
Sbjct: 255 RRLKTEVLTQLPPKIRQRIPFDLPSVAAKELNTSFEEWEKL---IRAPHSGSTETGSHFF 311
Query: 455 TEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHC 513
L+ +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 312 QAMGLMTRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAAIESKARY 371
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
IRIDG P + R LV +FQ+ + + A+LS++A G GLT TAA+ VIFAEL W PG +
Sbjct: 372 IRIDGSVPSSERVYLVNQFQKDPETRVAILSIQAAGQGLTFTAANHVIFAELYWDPGHIK 431
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
QAEDRAHRIGQ SS+NV+YL+AN T+D ++W ++ K G L+G + LE
Sbjct: 432 QAEDRAHRIGQSSSINVHYLIANGTLDSLMWGMLNRKAIVTGSTLNGRKEKLEA 485
>gi|449275320|gb|EMC84192.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A [Columba livia]
Length = 964
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 229/573 (39%), Positives = 329/573 (57%), Gaps = 50/573 (8%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEI-SGYNVEIENLHPLVQRAI 150
Y ++ F+++ ++ R W F L K++ + S +VE+E PL + I
Sbjct: 372 YSAEVIGVFKQMNSRNYDMNTRKWNF---LLEDYPKLMEALQSLVSVEVE---PLPEAVI 425
Query: 151 ASASAAPDLREKYDQIP--------AHIESKLLPFQRDGVRFALQHGGRILLADEMGLGK 202
+ +A IP + I + L+PFQR+GV FA+ GR+LLAD+MGLGK
Sbjct: 426 QTFAAQIQRSTSQTDIPDADLSVVDSEIVTSLMPFQREGVNFAILRNGRLLLADDMGLGK 485
Query: 203 TIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGF 261
TIQAI +A +R WP+L++TPSS+R WA +WL ++ P V+++ G N
Sbjct: 486 TIQAICIAAYYRKEWPLLVVTPSSVRFTWAEAFHRWLPSLSPGSTNVIVT--GKDN---- 539
Query: 262 TIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATL 321
+ SS L NIIS+D++ K+ L S+ F++VI DESHFLKN + R A +
Sbjct: 540 -LTSS----------LINIISFDLLSKMDKQLKST-FQVVIVDESHFLKNIKTARCRAAM 587
Query: 322 PIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQG 378
P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G Y
Sbjct: 588 PLLKAARRVILLSGTPAMSRPAELYTQIAAVQPAFFPQFHSFGLRYCDAKKMPWGWDYSR 647
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKG 438
+SN EL L++ ++MIRRLK DVL+QLP K+R+ + VA + + E K
Sbjct: 648 SSNLTELKILLEESIMIRRLKSDVLSQLPAKQRKVIV--VAPEGISAKTKAALAAEAKKM 705
Query: 439 KIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQP 497
++E ++L Y +AEAKI +V++Y+ ++E G KFL+FAHH+
Sbjct: 706 AKGYESKQQEKEALLL--------FYNRTAEAKIHSVIEYILELLERGNDKFLVFAHHKI 757
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
+LDAI KK+V IRIDG TP A RQ+L +FQ + A+LS+ A +GLTL+AA
Sbjct: 758 VLDAIVAELEKKRVEYIRIDGSTPSAERQSLCQKFQFSEKQIVALLSLTAANMGLTLSAA 817
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
V+FAEL W PG LIQAEDRAHRIGQ SSVNV+YL+A T DD +W +++ K+E LG+
Sbjct: 818 DLVVFAELFWNPGVLIQAEDRAHRIGQTSSVNVHYLVAKGTADDYLWPMIQKKIEVLGEA 877
Query: 618 LDGHEN-SLEVSSSQIRSSP-AKQKTLDSFLKR 648
N S S+ P KQKT+ +R
Sbjct: 878 GLSETNFSKTAESTNYCPKPDPKQKTIYDLFQR 910
>gi|328871601|gb|EGG19971.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum]
Length = 1331
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 203/481 (42%), Positives = 292/481 (60%), Gaps = 37/481 (7%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTP 224
+IP + LLPFQ GV F +QH GR ++ DEMGLGKTIQA+ +A+ FR WP+LI+ P
Sbjct: 537 RIPKALLDSLLPFQARGVLFGVQHNGRCMIGDEMGLGKTIQALGIASYFRSYWPLLIICP 596
Query: 225 SSLRLHWAAMIQQWL--NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
SSLR +W+ +Q+W +I +I +++S G N + D L NI+S
Sbjct: 597 SSLRHNWSKEVQRWFRSDITQQDISIMMS---GDNSA---------------DQLVNIVS 638
Query: 283 YDVVLKL-QNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSR 341
YD+V ++ + L + +F+ +I DESH+LKN AKRT+A L +++ A +LL+GTPALSR
Sbjct: 639 YDLVTRVYKKKLANQHFRAIICDESHYLKNVDAKRTSAVLSLVQSATIRILLTGTPALSR 698
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRL 398
PIEL+ QL AL ++ ++G RYC G G +G + G S+ ELH L+++ VMIRR
Sbjct: 699 PIELYPQLAALDAPIFDKQEDFGKRYCAGVKGRYGWDFSGNSHLAELHYLLRS-VMIRRH 757
Query: 399 KKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKF---- 454
K VL +LP K R QV +DV +D + +Y K + +S +E K
Sbjct: 758 KHSVLRELPPKHRSQVVVDVP-RDHQLLYEQ-------KAALVFSRSNKESMVRKGAAGE 809
Query: 455 TEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
E+ + +Y + +AK+ A Y +I KFL+FAHH +L+ + Q ++ I
Sbjct: 810 NERAHVMDLYLLTGQAKLAAAKSYTTQLILENKKFLLFAHHSDVLNGLEQEIRSHQISYI 869
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDG TPPA R+A VT FQ + + A+LS+ A G GLTLTA+S V+FAEL WTPG L Q
Sbjct: 870 RIDGSTPPAVREANVTRFQNQPKCQVALLSITAAGTGLTLTASSLVVFAELYWTPGVLRQ 929
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRS 634
AEDR HRIGQ + VN++YL+ T+DD +W ++ +KLE +G+ LDG E L + +R
Sbjct: 930 AEDRVHRIGQKNEVNIHYLIGKGTLDDRIWPMICNKLEVIGETLDGQEEKLLTNHLDLRG 989
Query: 635 S 635
+
Sbjct: 990 A 990
>gi|440903001|gb|ELR53718.1| Zinc finger Ran-binding domain-containing protein 3 [Bos grunniens
mutus]
Length = 1070
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 198/476 (41%), Positives = 294/476 (61%), Gaps = 29/476 (6%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
++ D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKT+QAI +A +++ WP+L
Sbjct: 24 KQLDFLPDKLRAKLLPFQKDGITFALRRDGRCMVADEMGLGKTVQAIGIAYFYKEEWPLL 83
Query: 221 ILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
I+ PSSLR W I++W+ + P EI V+ N++ +S+ +K + GL
Sbjct: 84 IVVPSSLRYPWTEEIEKWIPELSPEEINVI------QNKTDVGRIST-SKVTVLGYGLLT 136
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
+ ++ L N NFK+VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL
Sbjct: 137 TDAETLIDALNN----QNFKVVIVDESHYMKSRSATRSRILLPVVQKAKRAILLTGTPAL 192
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKAT 392
RP ELF Q+EAL+P + EY RYC V FG +GASN ELH L+ +
Sbjct: 193 GRPEELFMQIEALFPQKFGTWTEYAKRYCNAHVRYFGRRSQWDCRGASNLNELHQLL-SD 251
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL 452
+MIRRLK +VL QLP K RQ++ D+ +++ + F E E + + +E
Sbjct: 252 IMIRRLKTEVLTQLPPKIRQRIPFDLPSAAAKELNSSFEEWEKLMRDPYSGATE------ 305
Query: 453 KFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKV 511
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 306 --TVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKT 363
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
IRIDG P + R LV +FQ+ + + A+LS++A G GLT TAA+ V+FAEL W PG
Sbjct: 364 RYIRIDGSVPSSERIHLVNQFQKDPETRVAILSIQAAGQGLTFTAATHVVFAELYWDPGH 423
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
+ QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + L+
Sbjct: 424 IKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKLQA 479
>gi|327287818|ref|XP_003228625.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Anolis carolinensis]
Length = 960
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 212/540 (39%), Positives = 322/540 (59%), Gaps = 49/540 (9%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVP---FLSSAEKVLSEISGYNVEIENL-HPLVQ 147
Y ++ F+++ ++ K R W+F + L K L E VE+E L P+VQ
Sbjct: 388 YSADIIGIFKQLNSRNYDMKTRKWSFLLEDYLELIQMVKFLPE-----VELEPLPKPVVQ 442
Query: 148 -------RAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGL 200
+++ A+ P+ ++ H+ + L+PFQR+GV FA+ GR+LLAD+MGL
Sbjct: 443 VFASQFGKSVLKAADVPE--ADLSEVEPHVVNSLMPFQREGVNFAISRDGRLLLADDMGL 500
Query: 201 GKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSG 260
GKTIQAI +A ++ WP+L++ PSS+R WA +WL ++ + V++
Sbjct: 501 GKTIQAICIAAYYQKEWPLLVIAPSSVRYTWAEAFHRWLPSLSADTISVIA--------- 551
Query: 261 FTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAAT 320
T ++ + L NI+S+D++ K++ L ++ F++VI DESHFLKN + R A
Sbjct: 552 -------TGKDCLMARLINIVSFDLLSKMEKQLKTT-FQVVIVDESHFLKNGKTARCRAA 603
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQ 377
+P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G Y
Sbjct: 604 MPLLKAAKRVILLSGTPAMSRPAELYTQMAAVRPFSFSQFHAFGLRYCDAKQRPWGWDYS 663
Query: 378 GASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVK 437
G+SN EL L++ ++MIRRLK +VL+QLP K+R+ V + + R L + +
Sbjct: 664 GSSNLGELKLLLEESIMIRRLKSNVLSQLPAKQRKMVVVAPEGINARTKAELAAAAKEMA 723
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQ 496
K+ + E+E L Y +AEAKI +++Y+ ++E+G KFL+FAHH+
Sbjct: 724 KGYKSKQEEKEALLL----------FYNRTAEAKIHCIIEYILDLLESGKEKFLVFAHHK 773
Query: 497 PMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTA 556
+LDAI + KK + IRIDG TP A RQ+L EFQ + + AVLS+ A +GLTL++
Sbjct: 774 LVLDAIAEALAKKHIGYIRIDGSTPSAERQSLCQEFQLSEKLSVAVLSLTAANMGLTLSS 833
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A V+FAEL W PG LIQAEDRAHRIGQ SSVN++YL+A T DD +W +++ K+ LG+
Sbjct: 834 ADLVVFAELFWNPGVLIQAEDRAHRIGQTSSVNIHYLVAKGTADDYLWPMIQEKIRVLGE 893
>gi|355750822|gb|EHH55149.1| hypothetical protein EGM_04297 [Macaca fascicularis]
Length = 949
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 226/575 (39%), Positives = 331/575 (57%), Gaps = 46/575 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A Y L++ F+++ + K R W+F L K+++++ V+++ L +
Sbjct: 340 ADIGYSQDLIALFKQMDSRRYGNKTRKWSF---LLEEHSKLIAKVRCLPQVQLDPLPTTL 396
Query: 147 QRAIASA------SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS S APD+ E + + S L+PFQR GV FA+ GGR+LLAD+MG
Sbjct: 397 TLAFASQLKKTSLSLAPDVPEADLSGVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMG 456
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G +R
Sbjct: 457 LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVT---GKDR 513
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN++ R
Sbjct: 514 L--------------TAGLINIVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNSRTARCR 558
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G
Sbjct: 559 AAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWD 618
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V + + R AL
Sbjct: 619 YSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAAL------ 672
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
A K + K +K+ + + +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 673 ----DAAAKEMTTMDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAH 728
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +LDAI Q +K V IRIDG T A R+ L +FQ + AVLS+ A +GLT
Sbjct: 729 HKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF 788
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
++A V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ L
Sbjct: 789 SSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVL 848
Query: 615 GQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
+ N E++ S + P +Q+ D F K
Sbjct: 849 AEAGLSETNFSEMTESTDYLYKDPKQQQIYDLFQK 883
>gi|12855912|dbj|BAB30499.1| unnamed protein product [Mus musculus]
Length = 530
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 200/476 (42%), Positives = 296/476 (62%), Gaps = 33/476 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAIA+A +++ WP+LI+
Sbjct: 31 DFLPDKLRTKLLPFQKDGIVFALRRDGRCMVADEMGLGKTIQAIAIAYFYKEEWPLLIVV 90
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQ--LGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
PSSLR W +++W+ + P EI VV+++ +G S T++ + +
Sbjct: 91 PSSLRYPWIEELEKWIPELEPEEINVVMNKTDIGRIPGSRVTVLG------------YGL 138
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
++ D L + L + NF++VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL
Sbjct: 139 LTTDAE-TLLDALNTQNFRVVIVDESHYMKSRTAARSKILLPMVQKARRAILLTGTPALG 197
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATV 393
RP ELF Q+EAL+P + EY RYC V FG +GASN ELH L+ +
Sbjct: 198 RPEELFMQIEALFPQKFGTWIEYAKRYCNAHVRYFGKRRQWDCRGASNLSELHQLLN-DI 256
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL+QLP K RQ++ D+ ++++ A F E + + + E
Sbjct: 257 MIRRLKSEVLSQLPPKVRQRIPFDLPPAAVKELNASFEEWQKLMRAPNSGAME------- 309
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 310 -TVMGLITRMFKQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSR 368
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG P + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG +
Sbjct: 369 YIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHI 428
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + L+ +
Sbjct: 429 KQAEDRAHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKLQAT 484
>gi|355751623|gb|EHH55878.1| hypothetical protein EGM_05169 [Macaca fascicularis]
Length = 1078
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 198/473 (41%), Positives = 290/473 (61%), Gaps = 29/473 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAI +A +++ WP+LI+
Sbjct: 27 DFLPDRLRAKLLPFQKDGIIFALKRNGRCMVADEMGLGKTIQAIGIAYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I++W+ + P EI V+ N++ +S+ +K + GL +
Sbjct: 87 PSSLRYPWTEEIEKWIPELSPEEINVI------QNKTDVRRIST-SKVTVLGYGLLTADA 139
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
++ L N NFK+VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL RP
Sbjct: 140 ETLIDALNN----QNFKVVIVDESHYMKSRNATRSRILLPVVQKARRAILLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q+EAL+P + +Y RYC + FG +GASN ELH L+ + +MI
Sbjct: 196 EELFMQIEALFPQKFGRWTDYAKRYCNARIRYFGKRPQWDCRGASNLNELHQLL-SDIMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +VL QLP K RQ++ D+ +++ F E E + + E T
Sbjct: 255 RRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAME--------T 306
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K I
Sbjct: 307 VMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYI 366
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDGG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG + Q
Sbjct: 367 RIDGGVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQ 426
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
AEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 427 AEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQA 479
>gi|167525194|ref|XP_001746932.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774712|gb|EDQ88339.1| predicted protein [Monosiga brevicollis MX1]
Length = 712
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 188/459 (40%), Positives = 283/459 (61%), Gaps = 22/459 (4%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTP 224
++P + K++P+QR GV A++ GGR+L +DEMGLGKT+ ++A A ++ WP+L++ P
Sbjct: 113 RLPRRLVHKMMPYQRAGVACAIERGGRVLWSDEMGLGKTVSSLATAAYYQAEWPLLVVCP 172
Query: 225 SSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
SSL+L W I +WL I S I VV S + P++ L I+SYD
Sbjct: 173 SSLKLTWHHEICKWLQIDESAIGVVSS------------------KKSPMNKLVTILSYD 214
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
+ L L S++F+++IADESH+LKN +A RT A +P++ KA+ LLLSGTPALSRPIE
Sbjct: 215 LARNLHEHLTSADFQVIIADESHYLKNGKAARTKALMPLLHKAKRVLLLSGTPALSRPIE 274
Query: 345 LFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-YQGASNHEELHNLMKATVMIRRLKKD 401
L++QL AL P ++++ +G RYC + FG + G+ N +ELH +++ VMIRR+K
Sbjct: 275 LYQQLHALAPRLFRSEVAFGIRYCNSQLTAFGWRHDGSCNQDELHCVLERLVMIRRVKAA 334
Query: 402 VLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLIN 461
VL LP K RQ+V++ +R + A+ ++ + ++ ++ + + Q + + L
Sbjct: 335 VLTDLPPKTRQEVYVQADPAPLRALKAIMQKRKALERQLASLHGSQRAQGERALQA-LTT 393
Query: 462 KIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
+ Y + EAKI L YLE ++ K LIFAHH+ +LD + ++++ IRIDG TP
Sbjct: 394 EAYGLTGEAKIKGCLRYLEDLMNHDGKLLIFAHHKTLLDELATFLCQRQLRHIRIDGSTP 453
Query: 522 PASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHR 581
RQ L FQ+ + AVLS+ G GLTL AA+TV+FAEL W PG L QAEDRAHR
Sbjct: 454 THLRQQLCNSFQDDVLCRVAVLSITTAGTGLTLHAANTVVFAELYWNPGHLYQAEDRAHR 513
Query: 582 IGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
+GQ +VNV YLL T+DD++W ++ K + + + + G
Sbjct: 514 VGQRHNVNVRYLLCPGTLDDVMWSQLQRKAKIVQRAMAG 552
>gi|344268120|ref|XP_003405911.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3
[Loxodonta africana]
Length = 1080
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 197/476 (41%), Positives = 294/476 (61%), Gaps = 29/476 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAI +A +++ WP+LI+
Sbjct: 21 DYLPDKLRTKLLPFQKDGITFALRRDGRCMVADEMGLGKTIQAIGIAYFYKEEWPLLIVV 80
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQ--LGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
PSSLR W I++W+ + P EI V+ ++ +G + S TI+ + +
Sbjct: 81 PSSLRYPWTEEIEKWIPELGPEEITVIQNKADVGRISTSKVTILG------------YGL 128
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
++ D L + L + NF++VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL
Sbjct: 129 LTTDAKT-LIDTLNNQNFRVVIVDESHYMKSRTAARSKILLPLVQKARRAILLTGTPALG 187
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATV 393
RP ELF Q+EAL+P + +Y RYC V FG +GASN ELH L+ + +
Sbjct: 188 RPEELFMQIEALFPQKFGTWTDYSKRYCNAHVRYFGRRPLWDCRGASNLNELHQLL-SDI 246
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSE-EEVQSL 452
MIRRLK +VL QLP K RQ++ D+ +++ F E E + ++A S+ E S
Sbjct: 247 MIRRLKSEVLTQLPPKIRQRIPFDLPAAAAKELNTSFEEWERL---MRALNSDATETGSP 303
Query: 453 KFTEKNLINKIYTDSAEAKIPAVLDYLETVIE-AGCKFLIFAHHQPMLDAIHQLFLKKKV 511
F LI +++ +A AK AV DY++ +++ KFL+F HH ML A + ++ K
Sbjct: 304 FFQVMGLITRMFKQTAIAKAGAVKDYIKMMLQNESLKFLVFGHHLSMLQACTEAVIESKT 363
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
+RIDG P R LV +FQ+ D + A+LS++A G GLT TAA+ V+FAEL W PG
Sbjct: 364 RYVRIDGSVPSLERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAATHVVFAELYWDPGH 423
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
+ QAEDR HRIGQ +SVN++YL+AN T+D ++W ++ K + G L+G + L+
Sbjct: 424 IKQAEDRVHRIGQCNSVNIHYLVANGTLDTLMWGMLNRKAQVTGSTLNGRKEQLQA 479
>gi|363736001|ref|XP_003641641.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3
[Gallus gallus]
Length = 1093
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 199/472 (42%), Positives = 292/472 (61%), Gaps = 27/472 (5%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
+P + KLLPFQ G+ FALQ GR ++ADEMGLGKTIQAIA++ +R WP+LI+ PS
Sbjct: 18 LPERLRKKLLPFQEKGIIFALQRSGRCMIADEMGLGKTIQAIAISYYYRREWPLLIVVPS 77
Query: 226 SLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
SLR W +++W+ + P +I+++ N++ +S T + I L + +++ D
Sbjct: 78 SLRYPWVDELEKWIPELSPDDIIII------QNKTDTGRIS--TSKVIVLG--YGLLTSD 127
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
L + L NFK+V+ DESH++K+ A R+ LPI++KA A+LL+GTPAL RP E
Sbjct: 128 AQT-LVDTLYRQNFKVVVIDESHYMKSRNAMRSNILLPIVQKATRAILLTGTPALGRPEE 186
Query: 345 LFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMIRR 397
LF Q+EAL+P + EY +YC + FG +GASN +ELH L++ +MIRR
Sbjct: 187 LFMQIEALFPRRFGTWSEYAKKYCDARLRFFGKRKQWDCRGASNLKELHQLLRE-IMIRR 245
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTE- 456
LK DVL QLP K RQ++ D+ + + + F E E + K+ + E F E
Sbjct: 246 LKNDVLTQLPPKVRQRIPFDLPQATAKNLSTTFAEWERLMRKLNS-----EPTDSHFVEI 300
Query: 457 KNLINKIYTDSAEAKIPAVLDYLETVIEAG-CKFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
+LI ++Y ++A AK AV DY+ ++E KFL+FAHH ML A + ++ KV IR
Sbjct: 301 MSLITRMYKETAIAKAGAVKDYIRMMLENDKLKFLVFAHHISMLQACTEAVIENKVRYIR 360
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
IDG P A R LV +FQ+ D + A+LS++A G GLT TAA+ ++FAEL W PG + QA
Sbjct: 361 IDGSVPSAERIRLVNQFQKDPDTRVAILSIQAAGQGLTFTAATHIVFAELYWDPGHIKQA 420
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
EDRAHRIGQ SSVN+++L+A T+D ++W ++ K + G L+G + ++
Sbjct: 421 EDRAHRIGQCSSVNIHFLIAKGTLDPLMWAMLNRKAKVTGSTLNGKKEKMQA 472
>gi|188536006|ref|NP_001120938.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Danio rerio]
gi|221222756|sp|B2ZFP3.1|SMAL1_DANRE RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1;
AltName: Full=HepA-related protein; AltName:
Full=Sucrose nonfermenting protein 2-like 1
gi|187373311|gb|ACD03327.1| Smarcal1 [Danio rerio]
Length = 807
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 227/592 (38%), Positives = 337/592 (56%), Gaps = 45/592 (7%)
Query: 77 KFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY- 135
K L + + Y ++ F+++P +++ K R WTF L K++++++
Sbjct: 238 KCVLVSRSRLEVDIGYQADVIGIFKQMPSKSYDMKTRKWTF---LLEDYGKLMADLNELP 294
Query: 136 NVEIENLHPLVQRAIASA-----SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHG 189
VE E L V ++ +S S AP E I + L+PFQRDGV FA+
Sbjct: 295 TVETEPLPHAVLQSFSSQFEKTQSQAPVPPEADLSHIDPQLTRSLMPFQRDGVNFAVSRE 354
Query: 190 GRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVV 248
GR+LLAD+MGLGKT+QAI +A +R WP+L++ PSS+R WA ++WL ++ P I V
Sbjct: 355 GRLLLADDMGLGKTVQAICIAAYYRSEWPLLVVAPSSVRFTWAEAFRRWLPSVKPDSINV 414
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHF 308
V + ++ R+ GL NIISYD++ K+ SS F ++I DESHF
Sbjct: 415 V-------------VKGKDSLRS----GLINIISYDLLNKMDKQPPSSPFNVIIMDESHF 457
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
LKN + R A LP++K A+ +LLSGTPA+SRP EL+ Q++A+ P ++ H++G RYC
Sbjct: 458 LKNMKTARCRAALPLLKTAKRVILLSGTPAMSRPAELYTQIQAVRPALFPRFHDFGTRYC 517
Query: 369 KGGVFGI---YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQ 425
Y +SN EL L++ ++M+RRLK +VL+QLP K+R+ V + + R
Sbjct: 518 DAKQLPWGWDYSSSSNLTELKLLLEESLMLRRLKSEVLSQLPAKQRKVVTVTTDGINSRT 577
Query: 426 IYAL-FRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIE 484
AL E+ KG KS+E+ L F + +AEAKI A+++Y+ ++E
Sbjct: 578 KAALNAAARELAKGYHN--KSQEKEALLVF---------FNHTAEAKIRAIMEYISDMLE 626
Query: 485 AGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVL 543
G KFL+FAHH+ +LD+I + +K + IRIDG TP A RQ L FQ AVL
Sbjct: 627 CGREKFLVFAHHKLVLDSITKELGEKSISFIRIDGSTPSAERQLLCERFQASQQSCVAVL 686
Query: 544 SMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIV 603
S+ A +GLTL +A+ V+FAEL W PG LIQAEDR HRIGQ S+V+++YL+A T DD +
Sbjct: 687 SITAANMGLTLHSAALVVFAELFWNPGVLIQAEDRVHRIGQTSNVDIHYLVAKGTADDYL 746
Query: 604 WDVVRSKLENLGQVLDGHEN-SLEVSSSQIRSSPAKQKTLDSFLKRCNNVDD 654
W ++++K+ L QV N S S+ S +Q T+ +R + D+
Sbjct: 747 WPMIQAKMNVLEQVGLSESNISENAESASFHSRDRQQLTITEMFQRSFDEDE 798
>gi|383418731|gb|AFH32579.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Macaca mulatta]
Length = 949
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 226/575 (39%), Positives = 331/575 (57%), Gaps = 46/575 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A Y L++ F+++ ++ K R W F L K+++++ V+++ L +
Sbjct: 340 ADIGYSQDLIALFKQMDSRRYDVKTRKWRF---LLEEHSKLIAKVRCLPQVQLDPLPMTL 396
Query: 147 QRAIASA------SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS S APD+ E + + S L+PFQR GV FA+ GGR+LLAD+MG
Sbjct: 397 TLAFASQLKKTSLSLAPDVPEADLSGVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMG 456
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G +R
Sbjct: 457 LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVT---GKDR 513
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN++ R
Sbjct: 514 L--------------TAGLINIVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNSRTARCR 558
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G
Sbjct: 559 AAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWD 618
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V + + R AL
Sbjct: 619 YSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAAL------ 672
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
A K + K +K+ + + +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 673 ----DAAAKEMTTMDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAH 728
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +LDAI Q +K V IRIDG T A R+ L +FQ + AVLS+ A +GLT
Sbjct: 729 HKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF 788
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
++A V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ L
Sbjct: 789 SSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVL 848
Query: 615 GQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
+ N E++ S + P +Q+ D F K
Sbjct: 849 AEAGLSETNFSEMTESTDYLYKDPKQQQIYDLFQK 883
>gi|397495595|ref|XP_003818635.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1
isoform 1 [Pan paniscus]
gi|397495597|ref|XP_003818636.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1
isoform 2 [Pan paniscus]
Length = 954
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 225/575 (39%), Positives = 334/575 (58%), Gaps = 46/575 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A +Y L++ F+++ ++ K R W+F L K+++++ V+++ L +
Sbjct: 345 ADISYSQDLIALFKQMDSRRYDVKTRKWSF---LLEEHSKLIAKVRCLPQVQLDPLPMTL 401
Query: 147 QRAIASA------SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS S PD+ E ++ + S L+PFQR GV FA+ GGR+LLAD+MG
Sbjct: 402 TLAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMG 461
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A ++ WP+L++ PSS+R W +WL ++ P I VV++ G +R
Sbjct: 462 LGKTIQAICIAAFYQKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVT---GKDR 518
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN++ R
Sbjct: 519 L--------------TAGLINIVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNSRTARCR 563
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G
Sbjct: 564 AAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWD 623
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V + + R AL +
Sbjct: 624 YSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAALDAAAKE 683
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
+ K K K +K+ + + +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 684 MTTKDKT----------KQQQKDALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAH 733
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +LDAI Q +K V IRIDG T A R+ L +FQ + AVLS+ A +GLT
Sbjct: 734 HKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF 793
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
++A V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ L
Sbjct: 794 SSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVL 853
Query: 615 GQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
+ N E++ S + P +QK D F K
Sbjct: 854 AEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQK 888
>gi|118403613|ref|NP_001072923.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Xenopus (Silurana)
tropicalis]
gi|123908803|sp|Q0P4U8.1|SMAL1_XENTR RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1;
AltName: Full=HepA-related protein; AltName:
Full=Sucrose nonfermenting protein 2-like 1
gi|112418502|gb|AAI21898.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a-like 1 [Xenopus (Silurana)
tropicalis]
Length = 942
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 223/578 (38%), Positives = 334/578 (57%), Gaps = 44/578 (7%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYN-VEIENL-HPLVQRA 149
Y ++ F+++ ++ K R W+F L +K++ + VE+E L P++Q
Sbjct: 353 YHAEIIGLFKQMNTRNYDTKTRKWSF---MLEDYQKLMESVRNIQQVEVEPLPRPVLQAF 409
Query: 150 IASASAAPDLREK-----YDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTI 204
+RE+ Q+ + + S L+PFQRDGV FA+ GR+LLAD+MGLGKTI
Sbjct: 410 APQFGKTTIIREEIPEVDLSQVDSKLGSNLMPFQRDGVNFAVSREGRLLLADDMGLGKTI 469
Query: 205 QAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTI 263
QAI +A +R WP+L++ PSS+R WA Q+WL +I P + V++
Sbjct: 470 QAICIAAYYRKEWPLLVVAPSSVRFTWAEAFQRWLPSIRPESVNVIV------------- 516
Query: 264 VSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPI 323
T R+ L NI+S+D++ K+ +++ F+++I DESHFLKN + R A +P+
Sbjct: 517 ----TGRDSQSASLINIVSFDLLGKMDK-QIAATFQVIIIDESHFLKNVKTARCKAAMPL 571
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGAS 380
+K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H++G RYC K +G Y G+S
Sbjct: 572 LKSAKRVMLLSGTPAMSRPAELYTQIAAVRPSFFPRFHDFGIRYCDAKQMPWGWDYSGSS 631
Query: 381 NHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKI 440
N EL L++ ++MIRRLK +VL+QLP K+R+ V + + AL + +
Sbjct: 632 NLNELKLLLEESIMIRRLKSEVLSQLPAKQRKMVVVAPEGITAKTKAALAAAAKEMAKGF 691
Query: 441 KACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPML 499
K+ K EK + Y +AEAKI +VL+Y+ ++E+G KFL+FAHH+ +L
Sbjct: 692 KS----------KVQEKEALLLFYNRTAEAKIRSVLEYIMDLLESGREKFLVFAHHKLVL 741
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
D I + KK V IRIDG T A RQ+L +FQ + AVLS+ A +GLTL++A
Sbjct: 742 DHICEELGKKDVPYIRIDGNTSSADRQSLCHKFQMSEKSCVAVLSITAANMGLTLSSADL 801
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
V+FAEL W PG LIQAEDR HRIGQ SSVN++YL+A T DD +W +++ K++ LGQ
Sbjct: 802 VVFAELFWNPGVLIQAEDRVHRIGQTSSVNIHYLVAKGTADDYLWPMIQEKIKVLGQAGL 861
Query: 620 GHENSLEVS-SSQIRSSPAKQKTLDSFLKRCNNVDDSE 656
N E + S+ KQKT+ +R + + +E
Sbjct: 862 SEANFSETTESTDYFYKDPKQKTIYDLFQRSFSEEGAE 899
>gi|410897084|ref|XP_003962029.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A-like
protein 1-like [Takifugu rubripes]
Length = 813
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 227/581 (39%), Positives = 328/581 (56%), Gaps = 47/581 (8%)
Query: 91 TYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAI 150
+Y+ +++AF+ +P ++ K R W+F + +LS+I+ VE PL RAI
Sbjct: 233 SYNVDVIAAFKLMPTKDYDLKTRKWSFSLEDYRRLMDLLSKIAAVEVE-----PL-PRAI 286
Query: 151 ASASAA------PDLREK----YDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGL 200
A +A PDL+ I + L+PFQR+GV FA+ GR+LLAD+MGL
Sbjct: 287 VQAFSARFDGTEPDLQTXPEADLSSIDPTLTCSLMPFQREGVNFAVSKQGRLLLADDMGL 346
Query: 201 GKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSG 260
GKT+QAI +A +R WP+L++ PSS+R WA ++WL + + V+ + S +SG
Sbjct: 347 GKTVQAICIAAYYRSEWPLLVVAPSSVRFTWAEAFRRWLPSLSDDSINVVVKAKDSLQSG 406
Query: 261 FTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAAT 320
L NIISYD++ +++ S F ++I DESHFLKN + R A
Sbjct: 407 ----------------LVNIISYDLLSRIEKQHSGSRFNVLIMDESHFLKNMKTARCKAA 450
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQ 377
LP++K A+ +LLSGTPA+SRP EL+ Q+ A+ P ++ HE+G RYC K +G Y
Sbjct: 451 LPLLKAAKRVILLSGTPAMSRPSELYTQILAVRPLLFPRFHEFGLRYCDAKQSTWGWDYS 510
Query: 378 GASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVK 437
G+SN EL L++ ++M+RRLK DVLAQLP K+R+ V + + R AL
Sbjct: 511 GSSNLGELKLLLEESLMLRRLKSDVLAQLPAKQRKVVTVTTDSINSRIKAAL-------- 562
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQ 496
A K + K EK+ + Y +AEAK+ A+++Y+ ++E G KFL+FAHH+
Sbjct: 563 --SAAAKQLSKGHQNKKEEKDALLVFYNHTAEAKLQAIMEYITDMLEGGREKFLVFAHHK 620
Query: 497 PMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTA 556
+LD I KK IRIDG TP A RQ L +FQ + AVLS+ A +GLTL +
Sbjct: 621 LVLDHITAELEKKNASYIRIDGSTPSAERQQLCEKFQFSTNSCVAVLSITAANMGLTLHS 680
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A VIFAEL W PG LIQAEDR HRIGQ ++VNV+YL+A + DD +W +++ K+ L Q
Sbjct: 681 ADLVIFAELFWNPGVLIQAEDRVHRIGQTNNVNVHYLVAKGSADDHLWPLIQEKMNVLEQ 740
Query: 617 VLDGHEN-SLEVSSSQIRSSPAKQKTLDSFLKRCNNVDDSE 656
V N S ++ S Q+ + +R DD +
Sbjct: 741 VGLSESNLSDNAVNASFHSKDPTQRRITEMFQRSFTEDDGD 781
>gi|355565164|gb|EHH21653.1| hypothetical protein EGK_04773 [Macaca mulatta]
Length = 949
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 225/575 (39%), Positives = 331/575 (57%), Gaps = 46/575 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A Y L++ F+++ + K R W+F L K+++++ V+++ L +
Sbjct: 340 ADIGYSQDLIALFKQMDSRRYGNKTRKWSF---LLEEHSKLIAKVRCLPQVQLDPLPMTL 396
Query: 147 QRAIASA------SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS S APD+ E + + S L+PFQR GV FA+ GGR+LLAD+MG
Sbjct: 397 TLAFASQLKKTSLSLAPDVPEADLSGVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMG 456
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G +R
Sbjct: 457 LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVT---GKDR 513
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN++ R
Sbjct: 514 L--------------TAGLINIVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNSRTARCR 558
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G
Sbjct: 559 AAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWD 618
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V + + R AL
Sbjct: 619 YSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAAL------ 672
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
A K + K +K+ + + +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 673 ----DAAAKEMTTMDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAH 728
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +LDA+ Q +K V IRIDG T A R+ L +FQ + AVLS+ A +GLT
Sbjct: 729 HKVVLDAVTQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF 788
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
++A V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ L
Sbjct: 789 SSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVL 848
Query: 615 GQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
+ N E++ S + P +Q+ D F K
Sbjct: 849 AEAGLSETNFSEMTESTDYLYKDPKQQQIYDLFQK 883
>gi|241855293|ref|XP_002416013.1| conserved hypothetical protein [Ixodes scapularis]
gi|215510227|gb|EEC19680.1| conserved hypothetical protein [Ixodes scapularis]
Length = 675
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 221/574 (38%), Positives = 324/574 (56%), Gaps = 66/574 (11%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIA 151
Y ++ F+ I ++A ++ W+F +S +N ++ L PL +
Sbjct: 131 YHQQMIEIFKTISSRNYDAVQKRWSFA-------------LSSHNELVQKLKPLRPNVLV 177
Query: 152 SA---------SAAPDLREKYD----QIPAHIESKLLPFQRDGVRFALQHGGRILLADEM 198
+ AAP E+Y+ I +E LLPFQ++GV A++ GR+L+AD+M
Sbjct: 178 AEIPSHVLKVFEAAP--TEEYEVSLSGIDCKLEQALLPFQKEGVCTAIRRNGRLLIADDM 235
Query: 199 GLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNR 258
GLGKTIQ+IAVA FR+ WPVL++ PSS+R W W+ + V VL + GS++
Sbjct: 236 GLGKTIQSIAVACYFREEWPVLVVAPSSVRFTWKEAFLHWMPSLRDDQVTVL--VTGSDK 293
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVV-LKLQNILMSSNFKIVIADESHFLKNAQAKRT 317
+ D I SYD++ K+ +I F++VI DESHF+K+ +A RT
Sbjct: 294 -------------VDKDHQVVITSYDLLSRKVDDI--RGKFQVVILDESHFIKSHKAART 338
Query: 318 AATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI 375
A +I KA+ LLL+GTPALSRPIEL+ Q+ A+ P + ++ EYG RYC G V +G
Sbjct: 339 KACQKVIAKAKRVLLLTGTPALSRPIELYTQICAVRPKCFPSIQEYGIRYCNGKVTQWGW 398
Query: 376 -YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLD--VAEKDMRQIYALFRE 432
Y G+SN +EL L++ ++MIRRLK DVL+QLP K+RQ V LD + + + + +E
Sbjct: 399 DYSGSSNMQELQLLLEKSIMIRRLKSDVLSQLPAKQRQVVVLDPLTIKTTDKVLQHMAKE 458
Query: 433 LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIF 492
++ E +Q ++ + ++ + ++ K A+ YLE ++E+ KFL F
Sbjct: 459 MQ-----------NESIQGMQ--RRGVLLTYFRETGLHKCKAICKYLEDLLESDQKFLCF 505
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGL 552
AHHQ ++DA+ +L KK IRIDG T P R+ L +FQ D K AVLS+ A G+
Sbjct: 506 AHHQMVIDAVCELLDKKSCSHIRIDGKTSPELRKMLCDKFQYNDMCKVAVLSITAANAGI 565
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
TL++AS V+FAEL W PG L QAEDR HRIGQ + V V YL+A T DD +W +VR+KL+
Sbjct: 566 TLSSASLVVFAELFWNPGILTQAEDRVHRIGQQNCVMVQYLVAKGTADDYIWPLVRNKLD 625
Query: 613 NLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFL 646
L + +N +V S KQKTLD +
Sbjct: 626 TLSKAGLSKDNFYDVDLKTCADS--KQKTLDDWF 657
>gi|148226355|ref|NP_001089668.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Xenopus laevis]
gi|123903207|sp|Q498E7.1|SMAL1_XENLA RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1;
AltName: Full=HepA-related protein; AltName:
Full=Sucrose nonfermenting protein 2-like 1
gi|71681279|gb|AAI00246.1| Smarcal1 protein [Xenopus laevis]
Length = 960
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 226/570 (39%), Positives = 331/570 (58%), Gaps = 44/570 (7%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYN-VEIENLHPLVQRAI 150
Y ++ F+++ ++ K R W+F L +K++ + VE+E L V +A
Sbjct: 371 YHTEIIGLFKQMNTRNYDTKTRKWSF---MLEDYQKLMESVRNIQQVEVEPLPRPVLQAF 427
Query: 151 AS--ASAAPDLREKYDQIPAHIESKL----LPFQRDGVRFALQHGGRILLADEMGLGKTI 204
A L E D +H++SKL +PFQRDGV FA+ GR+LLAD+MGLGKTI
Sbjct: 428 APQFEKTTISLAEIEDVDLSHVDSKLIGNLMPFQRDGVNFAISREGRLLLADDMGLGKTI 487
Query: 205 QAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTI 263
QAI +A +R WP+L++ PSS+R WA +WL ++ P + V++
Sbjct: 488 QAICIAAYYRKEWPLLVVAPSSVRFTWAEAFHRWLPSLNPESVNVIV------------- 534
Query: 264 VSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPI 323
T R+ L NIIS+D++ K+ +++NFK++I DESHFLKN + R A +P+
Sbjct: 535 ----TGRDSQSANLINIISFDLLGKMDK-QIAANFKVIIIDESHFLKNVKTARCKAAMPL 589
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGAS 380
+K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H++G RYC K +G Y G+S
Sbjct: 590 LKSAKRVMLLSGTPAMSRPAELYTQIAAVRPTFFPRFHDFGIRYCDAKQMPWGWDYSGSS 649
Query: 381 NHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKI 440
N EL L++ ++MIRRLK +VL+QLP K+R+ V + + AL + +
Sbjct: 650 NLNELKLLLEESIMIRRLKSEVLSQLPAKQRKMVVVAPEGITAKTKAALAAAAKEMAKGF 709
Query: 441 KACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPML 499
K+ K EK + Y +AEAKI +VL+Y+ ++E+G KFL+FAHH+ +L
Sbjct: 710 KS----------KVQEKEALLLFYNRTAEAKIRSVLEYIIDLLESGREKFLVFAHHKLVL 759
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
D I + KK+V IRIDG T A RQ+L +FQ + AVLS+ A +GLTL++A
Sbjct: 760 DNICEELGKKEVPYIRIDGNTSSADRQSLCHKFQFSEKSCVAVLSITAANMGLTLSSADL 819
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
V+FAEL W PG LIQAEDR HRIGQ SSVN++YL+A T DD +W +++ K++ LGQ
Sbjct: 820 VVFAELFWNPGVLIQAEDRVHRIGQTSSVNIHYLVAKGTADDYLWPMIQEKIKVLGQAGL 879
Query: 620 GHENSLEVS-SSQIRSSPAKQKTLDSFLKR 648
N E + S+ KQKT+ +R
Sbjct: 880 SEANFSETTESTDYFYKDPKQKTIYDLFQR 909
>gi|428178195|gb|EKX47071.1| hypothetical protein GUITHDRAFT_69936 [Guillardia theta CCMP2712]
Length = 629
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 200/511 (39%), Positives = 299/511 (58%), Gaps = 51/511 (9%)
Query: 133 SGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRI 192
S N ++++H + A + + + Y IP +IES L+PFQ++GV+F + HGGR+
Sbjct: 65 SSSNRSVKSVHASCEGAERHGTRGEEAEDLYKLIPGNIESALMPFQKEGVKFGISHGGRV 124
Query: 193 LLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLS 251
L+ADEMGLGKT+QAIA+A F WPV+ L P+S+R WA +++WL ++ P +I VV S
Sbjct: 125 LIADEMGLGKTLQAIAIACVFSQDWPVVCLMPASMRWVWAEELEKWLTDLRPGDIKVVRS 184
Query: 252 QLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK---LQNILMSSNFKIVIADESHF 308
N +V I++YD++ + LQ L+ F+ +I DESH+
Sbjct: 185 STDVDNLKTAKMV---------------IVTYDLLSRSDFLQTSLIGCGFRTIIVDESHY 229
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
KN KRT A + + K+A+ +LLSGTPAL+RP ELF Q+ + + + EY RYC
Sbjct: 230 CKNKDTKRTKAVMRLAKQARRCVLLSGTPALNRPAELFSQITMIADKTFGSWTEYTTRYC 289
Query: 369 KG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQ 425
G G FG +GA++ EELH+ ++MIRRLK DV+++LP KRRQ + L++ + ++
Sbjct: 290 DGRRGRFGWECRGATHIEELHD---KSIMIRRLKNDVMSELPAKRRQHIPLELDQNSLKS 346
Query: 426 IYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVLDYLETVIE 484
I ++ + G E+N++ ++ +A AK Y+ ++E
Sbjct: 347 IRENMNKMGGLDG----------------FERNVVWGELTKQTALAKAELAAQYMMDLVE 390
Query: 485 AGCKFLIFAHHQPMLDAIHQLFLKKK---------VHCIRIDGGTPPASRQALVTEFQEK 535
G K LIFAH+ +LD + + + K V IRIDGG + R LV +FQ +
Sbjct: 391 GGAKLLIFAHYLAVLDTLEKELCRAKARSNEINKCVGYIRIDGGVSASDRPDLVKKFQTR 450
Query: 536 DDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLA 595
DV+ AVL ++A G GLTLTAAS V+FAEL TPG ++QAEDRAHRIGQ +SVNV+YL+A
Sbjct: 451 SDVRVAVLGLQAAGQGLTLTAASAVVFAELHVTPGVMVQAEDRAHRIGQTASVNVHYLVA 510
Query: 596 NDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
T+D+ +W ++ KL + L+G + LE
Sbjct: 511 RQTLDECIWRLLTRKLSVVSHTLNGKKQRLE 541
>gi|348586025|ref|XP_003478771.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
isoform 2 [Cavia porcellus]
Length = 1073
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 200/476 (42%), Positives = 290/476 (60%), Gaps = 29/476 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ++G+ FAL+ GR ++ADEMGLGKTIQAIA+A +++ WP+LI+
Sbjct: 27 DYLPERLRAKLLPFQKEGIIFALRRDGRCMVADEMGLGKTIQAIAIAYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I++W+ + P +I V+ N++ + N+K + GL +
Sbjct: 87 PSSLRYPWTEEIEKWIPELGPEDINVI------QNKTDVGKIP-NSKVTVLGYGLLTTGA 139
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
++ + N NF++VI DESH++K+ A R+ LPI++KA+ A+LL+GTPAL RP
Sbjct: 140 ETLIDAVNN----QNFRVVIVDESHYMKSRTATRSNILLPIVQKARRAVLLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q+EAL+P + +Y RYC V FG +GASN ELH L+ + +MI
Sbjct: 196 EELFMQIEALFPQKFGTWTDYSKRYCNAHVRYFGKRAQWDCRGASNLHELHKLL-SDIMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +VL QLP K RQ++ D+ +++ F E E + SE +
Sbjct: 255 RRLKTEVLTQLPPKIRQRIPFDLPPAAAKELNTSFEEWEKLMRAPNPGGSETVI------ 308
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
LI +I+ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K +
Sbjct: 309 --GLITRIFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLNMLQACTEAVIENKTRYV 366
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDG P + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG L Q
Sbjct: 367 RIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHLKQ 426
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSS 630
AEDRAHRIGQ SSVN++YL+AN T+D +W ++ K + G L+G + L+ S
Sbjct: 427 AEDRAHRIGQYSSVNIHYLIANGTLDTFMWGMLNRKAQITGSTLNGRKEQLQAEES 482
>gi|348586023|ref|XP_003478770.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
isoform 1 [Cavia porcellus]
Length = 1077
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 200/476 (42%), Positives = 290/476 (60%), Gaps = 29/476 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ++G+ FAL+ GR ++ADEMGLGKTIQAIA+A +++ WP+LI+
Sbjct: 27 DYLPERLRAKLLPFQKEGIIFALRRDGRCMVADEMGLGKTIQAIAIAYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I++W+ + P +I V+ N++ + N+K + GL +
Sbjct: 87 PSSLRYPWTEEIEKWIPELGPEDINVI------QNKTDVGKIP-NSKVTVLGYGLLTTGA 139
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
++ + N NF++VI DESH++K+ A R+ LPI++KA+ A+LL+GTPAL RP
Sbjct: 140 ETLIDAVNN----QNFRVVIVDESHYMKSRTATRSNILLPIVQKARRAVLLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q+EAL+P + +Y RYC V FG +GASN ELH L+ + +MI
Sbjct: 196 EELFMQIEALFPQKFGTWTDYSKRYCNAHVRYFGKRAQWDCRGASNLHELHKLL-SDIMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +VL QLP K RQ++ D+ +++ F E E + SE +
Sbjct: 255 RRLKTEVLTQLPPKIRQRIPFDLPPAAAKELNTSFEEWEKLMRAPNPGGSETVI------ 308
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
LI +I+ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K +
Sbjct: 309 --GLITRIFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLNMLQACTEAVIENKTRYV 366
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDG P + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG L Q
Sbjct: 367 RIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHLKQ 426
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSS 630
AEDRAHRIGQ SSVN++YL+AN T+D +W ++ K + G L+G + L+ S
Sbjct: 427 AEDRAHRIGQYSSVNIHYLIANGTLDTFMWGMLNRKAQITGSTLNGRKEQLQAEES 482
>gi|157817600|ref|NP_001101692.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Rattus norvegicus]
gi|221222728|sp|B4F769.1|SMAL1_RAT RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1;
AltName: Full=HepA-related protein; AltName:
Full=Sucrose nonfermenting protein 2-like 1
gi|149016063|gb|EDL75309.1| Swi/SNF related matrix associated, actin dependent regulator of
chromatin, subfamily a-like 1 (predicted) [Rattus
norvegicus]
gi|195540216|gb|AAI68154.1| Smarcal1 protein [Rattus norvegicus]
Length = 910
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 229/617 (37%), Positives = 339/617 (54%), Gaps = 53/617 (8%)
Query: 61 GSLGDFSKEQVPKLSV---KFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTF 117
G+ G S P L+ + L + Y V+++ F+++ ++ K R W F
Sbjct: 272 GTGGQTSLPSAPSLTFVTGRCMLISRARFEVDIGYSEVVIALFKQMESRNYDPKTRKWNF 331
Query: 118 PVPFLSSAEKVLSEISGY-NVEIENLHPLVQRAIASASAAPDLREKYD-------QIPAH 169
L K+++ V+++ L + A AS L+ K D + A
Sbjct: 332 ---LLEEHNKLIARSRELKQVQLDPLPKTLTLAFASQLEKTSLQSKADVPEADLSGVDAK 388
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+ S L+PFQR+GV FA+ GR+LLAD+MGLGKTIQAI +A +R WP+L++ PSS+R
Sbjct: 389 LVSNLMPFQREGVSFAISKRGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRF 448
Query: 230 HWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK 288
W +WL ++ P +I VV++ G GL NI+S+D++ K
Sbjct: 449 TWEQAFLRWLPSLSPEDINVVVTGKGRLTA-----------------GLVNIVSFDLLSK 491
Query: 289 LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQ 348
L+ L + FK+VI DESHFLKN + R A +PI+K A+ +LLSGTPA+SRP EL+ Q
Sbjct: 492 LEKQLKTP-FKVVIIDESHFLKNIKTARCRAAVPILKVAKRVILLSGTPAMSRPAELYTQ 550
Query: 349 LEALYPDVYKNVHEYGNRYCKGGVFGI---YQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
+ A+ P + H +G RYC Y G+SN EL L++ VM+RRLK DVL+Q
Sbjct: 551 IIAVKPTFFPQFHAFGLRYCDAKRLPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQ 610
Query: 406 LPVKRRQQVFLDVAEKDMRQIYALFREL-EVVKGKIKACKSEEEVQSLKFTEKNLINKIY 464
LP K+R+ V ++ R AL E+ K K K +K + +
Sbjct: 611 LPAKQRKMVVVNPGRISTRAKAALDAAAKEMTKDKTKQ------------QQKEALLVFF 658
Query: 465 TDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
+AEAKIP V++Y+ ++E+G KFL+FAHH+ +LDAI + +K V IRIDG TP A
Sbjct: 659 NRTAEAKIPCVIEYILDLLESGREKFLVFAHHKVLLDAIAKELERKNVQHIRIDGSTPSA 718
Query: 524 SRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIG 583
R+ L +FQ AVLS+ A +GLT ++A V+FAEL W PG LIQAEDR HRIG
Sbjct: 719 DREDLCQQFQLSKGHTVAVLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIG 778
Query: 584 QVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ--IRSSPAKQKT 641
Q +SV ++YL+A T DD +W +++ K++ LG+ N E++ + + P KQKT
Sbjct: 779 QTNSVGIHYLVAKGTADDYLWPLIQEKIKVLGEAGLSETNFSEMTEATDYLYKDP-KQKT 837
Query: 642 LDSFLKRCNNVDDSEHQ 658
+ S ++ D ++ +
Sbjct: 838 IYSLFQQSFEDDGNDME 854
>gi|327260656|ref|XP_003215150.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
[Anolis carolinensis]
Length = 1095
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 202/484 (41%), Positives = 293/484 (60%), Gaps = 25/484 (5%)
Query: 153 ASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATC 212
++ D EK +P ++ +LLPFQ+ G+ FAL+ GGR ++ADEMGLGKTIQAIAV+
Sbjct: 10 GTSGSDFDEKLSYLPERLKKRLLPFQKKGIVFALERGGRCMIADEMGLGKTIQAIAVSYY 69
Query: 213 FRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRN 271
+++ WP+LI+ PSSLR W +++W+ ++ P +I+++ N++ VS T +
Sbjct: 70 YKNEWPLLIVLPSSLRYPWVDELEKWIPDLSPEDIIII------QNKTDIWRVS--TSKV 121
Query: 272 IPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
I L + +++ D L + L FK+VI DESH++K+ A R+ LPI++ A A+
Sbjct: 122 IVLG--YGLLTSDAQT-LIDTLYKQEFKVVIVDESHYMKSRNAARSKILLPIVQNAMRAI 178
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEE 384
LL+GTPAL RP ELF QLEA+ P + EY +YC V FG +GASN +E
Sbjct: 179 LLTGTPALGRPEELFMQLEAVCPRKFGTWTEYAKKYCNARVRFFGKKRQWDCRGASNLDE 238
Query: 385 LHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACK 444
LH L+ VMIRRLK DVL QLP K RQ++ D+ + + A F E E K+
Sbjct: 239 LHQLLNH-VMIRRLKNDVLTQLPPKIRQRIPFDLPKSAASEFNASFEEWE----KLMRAS 293
Query: 445 SEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIH 503
+ +S LI +++ +A AK AV DY++ ++E KFL+FAHH ML A
Sbjct: 294 DLDSTESDFVQVMGLITRMFKQTAIAKAGAVKDYIKMLLENDNLKFLVFAHHLSMLQACT 353
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
+ ++ K IRIDG + R LV +FQ+ D + A+LS++A G GLT TAA+ V+FA
Sbjct: 354 EAVIENKTRYIRIDGSVASSERINLVNQFQKDPDTRVAILSIQAAGQGLTFTAATHVVFA 413
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
EL W PG + QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K G L+G +
Sbjct: 414 ELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTMDPLMWAMLNRKARVTGTTLNGKKE 473
Query: 624 SLEV 627
L+
Sbjct: 474 KLQA 477
>gi|26350683|dbj|BAC38978.1| unnamed protein product [Mus musculus]
Length = 1069
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 199/476 (41%), Positives = 295/476 (61%), Gaps = 33/476 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAIA+A +++ WP+LI+
Sbjct: 27 DFLPDKLRTKLLPFQKDGIVFALRRDGRCMVADEMGLGKTIQAIAIAYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQ--LGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
PSSLR W +++W+ + P EI VV+++ +G S T++ + +
Sbjct: 87 PSSLRYPWIEELEKWIPELEPEEINVVMNKTDIGRIPGSRVTVLG------------YGL 134
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
++ D L + L + NF++VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL
Sbjct: 135 LTTDAET-LLDALNTQNFRVVIVDESHYMKSRTAARSKILLPMVQKARRAILLTGTPALG 193
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATV 393
RP ELF Q+EAL+P + EY RYC V FG +GASN ELH L+ +
Sbjct: 194 RPEELFMQIEALFPQKFGTWIEYAKRYCNAHVRYFGKRRQWDCRGASNLSELHQLLN-DI 252
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL+QLP K RQ++ D+ ++++ A F E + + + E
Sbjct: 253 MIRRLKSEVLSQLPPKVRQRIPFDLPPAAVKELNASFEEWQKLMRAPNSGAME------- 305
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 306 -TVMGLITRMFKQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSR 364
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG P + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG +
Sbjct: 365 YIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHI 424
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
QAEDRAHRI Q SSVN++YL+AN T+D ++W ++ K + G L+G + L+ +
Sbjct: 425 KQAEDRAHRIRQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKLQAT 480
>gi|242018235|ref|XP_002429584.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514551|gb|EEB16846.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 657
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 221/571 (38%), Positives = 309/571 (54%), Gaps = 72/571 (12%)
Query: 68 KEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEK 127
K++ P ++V F A Y + F+ IP +++ + WTFP
Sbjct: 64 KQETPYVNVTFSAINEDRFIADMNYHAPSIEVFKTIPGKLYDSVLKKWTFP--------- 114
Query: 128 VLSEISGYNVEIENLHP-LVQRAIAS----ASAAPDLREKYD--QIPAHIESKLLPFQRD 180
LSE S ++ NL P ++ AI APD E+ D +I ++ L+PFQ +
Sbjct: 115 -LSEHSNLTSKLRNLKPEVIVNAIPDNVFKTLCAPDEPEEVDWSRIDKNLRDSLMPFQVE 173
Query: 181 GVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL- 239
GVRF ++ GR L+AD+MGLGKTIQ++ +A F++ WP+LI+ PSS+R W I+ ++
Sbjct: 174 GVRFGIKKNGRCLIADDMGLGKTIQSLGIACYFKNNWPLLIICPSSMRFPWQEAIKTFMP 233
Query: 240 NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN----IISYDVVLKLQNILMS 295
NI P+ V++ + D ++N I SYD++ +
Sbjct: 234 NINPTISVLISGK----------------------DSIYNEDIIITSYDIMKICYENIRK 271
Query: 296 SNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPD 355
F +VI DESH LKN ++ RT L + K +LLSGTPALSRP+EL+ Q+ A+ P
Sbjct: 272 KKFGVVIFDESHALKNNKSARTQVALQLCKNISRVILLSGTPALSRPLELYSQISAIDPL 331
Query: 356 VYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQ 412
++ N +++G RYC G FG + G+SN EEL +K +M+RRLK +VLAQLP K R+
Sbjct: 332 IFPNFYDFGIRYCNGKKDKFGWNFTGSSNLEELEIFLKKRIMVRRLKSEVLAQLPSKIRK 391
Query: 413 QVFLD-----VAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEK-NLINKIYTD 466
V L+ K MRQ+ E + +S K EK + + Y+
Sbjct: 392 IVILNPNMVKSVSKKMRQM-------------------ESQFESQKGVEKQSTLISYYSI 432
Query: 467 SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQ 526
+ AK+ AV +Y+ +E KFL+FAHH +LD I L KKV IRIDG +RQ
Sbjct: 433 TGNAKLSAVCEYIGDKLENSNKFLVFAHHSNVLDGICDLLNNKKVDYIRIDGTVSSENRQ 492
Query: 527 ALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVS 586
EFQ + K AVLS+KA GLTLT A VIFAEL W PG+LIQAEDRAHRIGQ
Sbjct: 493 IKCQEFQSNPNCKVAVLSLKAANTGLTLTEAQLVIFAELYWNPGELIQAEDRAHRIGQRD 552
Query: 587 SVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
SV V YL+A T DD +W +V+ KL L +V
Sbjct: 553 SVLVEYLIAKGTADDHLWSLVQLKLNILNKV 583
>gi|355566023|gb|EHH22452.1| hypothetical protein EGK_05722 [Macaca mulatta]
Length = 1078
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 198/473 (41%), Positives = 289/473 (61%), Gaps = 29/473 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAI +A +++ WP+LI+
Sbjct: 27 DFLPDRLRAKLLPFQKDGIIFALKRNGRCMVADEMGLGKTIQAIGIAYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I++W+ + P EI V+ N++ +S+ +K + GL +
Sbjct: 87 PSSLRYPWTEEIEKWIPELSPEEINVI------QNKTEKKRIST-SKVTVLGYGLLTADA 139
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
++ L N NFK+VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL RP
Sbjct: 140 ETLIDALNN----QNFKVVIVDESHYMKSRNATRSRILLPVVQKARRAILLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q+EAL+P + +Y RYC + FG +GASN ELH L+ + +MI
Sbjct: 196 EELFMQIEALFPQKFGRWTDYAKRYCNARIRYFGKRPQWDCRGASNLNELHQLL-SDIMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +VL QLP K RQ++ D+ +++ F E E + + E T
Sbjct: 255 RRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAME--------T 306
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
LI ++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K I
Sbjct: 307 VMGLITHMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYI 366
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDGG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG + Q
Sbjct: 367 RIDGGVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQ 426
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
AEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 427 AEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQA 479
>gi|296204912|ref|XP_002749531.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3
[Callithrix jacchus]
Length = 1080
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 198/472 (41%), Positives = 292/472 (61%), Gaps = 29/472 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FALQ GR ++ADEMGLGKTIQAIAVA +++ WP+LI+
Sbjct: 27 DFLPDRLRAKLLPFQKDGIIFALQRNGRCMVADEMGLGKTIQAIAVAYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I++W+ + P EI V+ N++ +S+ +K + GL +
Sbjct: 87 PSSLRYPWTEEIEKWIPELSPEEINVI------QNKTDVRRIST-SKVTVLGYGLLTTDA 139
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
++ L N FK+VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL RP
Sbjct: 140 ETLIDALNN----QKFKVVIVDESHYMKSRNATRSKILLPVVQKARRAILLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q+EAL+P + + +Y RYC + FG +GASN +ELH L+ + +MI
Sbjct: 196 EELFMQIEALFPQKFGSWTDYAKRYCNAHIRYFGKRPQWDCRGASNLKELHQLL-SDIMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +VL QLP K RQ++ D+ +++ F E + + + E T
Sbjct: 255 RRLKTEVLTQLPPKIRQRIPFDLPSAAAKELNTSFEEWKKLMRMPNSGAME--------T 306
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K+ I
Sbjct: 307 VMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKIRYI 366
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG + Q
Sbjct: 367 RIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQ 426
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
AEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 427 AEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQ 478
>gi|395823737|ref|XP_003785137.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1
[Otolemur garnettii]
Length = 920
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 224/561 (39%), Positives = 327/561 (58%), Gaps = 42/561 (7%)
Query: 100 FRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIAS----ASA 155
F+++ ++ K R W+F + S+ K + + V+++ L + A AS S
Sbjct: 330 FKQMDSRKYDVKTRKWSFLLEEHSTLIKSVRSLP--QVQLDPLPMTLTLAFASQMQKTSP 387
Query: 156 AP--DLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATC 212
P D+ E Q+ + S L+PFQR GV FA+ GGR+LLAD+MGLGKTIQAI +A
Sbjct: 388 HPTADVPEADLSQVEDKLVSNLMPFQRTGVNFAIAKGGRLLLADDMGLGKTIQAICIAAF 447
Query: 213 FRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRN 271
+R WP+L++ PSS+R W QWL ++ P ++ VV+ T ++
Sbjct: 448 YRKEWPLLVVVPSSVRFTWEQAFLQWLPSLSPRDVNVVV-----------------TGKD 490
Query: 272 IPLDGLFNIISYDVVLKLQNIL-MSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
GL NI+S+D++ +L+ L + FK+VI DESHFLKN++ R A LP++K A+
Sbjct: 491 CLNSGLVNIVSFDLLSRLEKQLKLKPPFKVVIIDESHFLKNSKTARCRAALPLLKVAKRV 550
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHN 387
+LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G Y G+SN EL
Sbjct: 551 ILLSGTPAMSRPAELYTQIIAVKPTFFPQFHTFGLRYCAAKKMPWGWDYSGSSNLGELKL 610
Query: 388 LMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE 447
L++ VM+RRLK DVL+QLP K+R+ V + + R AL + K K K ++
Sbjct: 611 LLEEAVMLRRLKSDVLSQLPAKQRKMVVVAPGRINARARAALDAAAMEMTTKDKTKKEQK 670
Query: 448 EVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLF 506
E L F +AEAKIP+V++Y+ ++E+G KFL+FAHH+ +LDA+ +
Sbjct: 671 EALILFFNR----------TAEAKIPSVIEYILDLLESGREKFLVFAHHKVVLDAVTKEL 720
Query: 507 LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELS 566
+K V IRIDG TP A R+ L +FQ + AVLS+ A +GLT ++A V+FAEL
Sbjct: 721 ERKHVQHIRIDGSTPSADREHLCQQFQLWERHAVAVLSITAANMGLTFSSADLVVFAELF 780
Query: 567 WTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
W PG LIQAEDR HRIGQ +SV ++YL+A T DD +W +++ K++ LG+ N E
Sbjct: 781 WNPGVLIQAEDRVHRIGQTNSVGIHYLVARGTADDYLWPLIQEKIKVLGEAGLSETNFSE 840
Query: 627 VSSSQIRSSPAKQKTLDSFLK 647
V+ + P +QK D F K
Sbjct: 841 VTEATDYKDPKQQKIYDLFQK 861
>gi|332236921|ref|XP_003267647.1| PREDICTED: DNA annealing helicase and endonuclease ZRANB3 [Nomascus
leucogenys]
Length = 1079
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 198/473 (41%), Positives = 290/473 (61%), Gaps = 29/473 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAI + +++ WP+LI+
Sbjct: 27 DFLPDRLRAKLLPFQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I++W+ + P EI V+ N++ +S+ +K + GL +
Sbjct: 87 PSSLRYPWTEEIEKWIPELSPEEINVI------QNKTDVRRIST-SKVTVLGYGLLTADA 139
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
++ L N NFK+VI DESH++K+ A R+ LPI++KA+ A+LL+GTPAL RP
Sbjct: 140 ETLIDALNN----QNFKVVIVDESHYMKSRNATRSRILLPIVQKARRAILLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q+EAL+P + +Y RYC + FG +GASN ELH L+ + +MI
Sbjct: 196 EELFMQIEALFPQKFGRWTDYAKRYCNARIRYFGKRPQWDCRGASNLNELHQLL-SDIMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +VL QLP K RQ++ LD+ ++++ F E E + + E T
Sbjct: 255 RRLKTEVLTQLPPKVRQRIPLDLPSAAVKELNTSFDEWEKIMRTPNSGAME--------T 306
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K I
Sbjct: 307 VMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTGYI 366
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG + Q
Sbjct: 367 RIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQ 426
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
AEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 427 AEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQA 479
>gi|431894787|gb|ELK04580.1| Zinc finger Ran-binding domain-containing protein 3 [Pteropus
alecto]
Length = 1068
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 198/478 (41%), Positives = 291/478 (60%), Gaps = 33/478 (6%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
++ D +P + KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAIA+A +++ WP+L
Sbjct: 24 KQLDFLPDKLREKLLPFQKDGITFALRRNGRCMIADEMGLGKTIQAIAIAYFYKEEWPLL 83
Query: 221 ILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQ--LGGSNRSGFTIVSSNTKRNIPLDGL 277
I+ PSSLR W I++W+ + P EI V+ ++ +G + S T++
Sbjct: 84 IVVPSSLRYPWTEEIEKWIPELGPEEINVIQNKTDVGRISISKVTVLG------------ 131
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
+ +++ D L + L + NF +VI DESH++K+ A R+ LPI++KA+ A+LL+GTP
Sbjct: 132 YGLLTTDAE-ALVDALNNQNFNVVIVDESHYMKSRNATRSKILLPIVQKAKRAILLTGTP 190
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMK 390
AL RP ELF Q+EAL+P + +Y RYC + FG +GASN ELH L+
Sbjct: 191 ALGRPEELFMQIEALFPQKFGTWTDYAKRYCNAHIRYFGKRSQWDCRGASNLSELHQLL- 249
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQ 450
+ +MIRRLK +VL QLP K RQ++ D+ +++ F E E + +E
Sbjct: 250 SDIMIRRLKTEVLTQLPPKIRQRIPFDLPSAAAKELNTSFEEWEKLMRAPNPGATE---- 305
Query: 451 SLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKK 509
T LI I+ +A AK AV DY++ ++ KFL+FAHH ML A + ++
Sbjct: 306 ----TVMGLITHIFKQTAIAKAGAVKDYIKMMLHNDSLKFLVFAHHLNMLQACTEAVIEN 361
Query: 510 KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTP 569
K +RIDG P + R LV +FQ+ + + A+LS++A G GLT TAA+ V+FAEL W P
Sbjct: 362 KTRYVRIDGSVPSSERIYLVNQFQKDPETRVAILSIQAAGQGLTFTAATHVVFAELYWDP 421
Query: 570 GDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
G + QAEDRAHRIGQ SSVN++YL+AN T+D I+W ++ K + G L+G + L+
Sbjct: 422 GHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTIMWGMLNRKAQVTGSTLNGRKEQLQA 479
>gi|403259078|ref|XP_003922062.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3
[Saimiri boliviensis boliviensis]
Length = 1080
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 198/473 (41%), Positives = 291/473 (61%), Gaps = 29/473 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FALQ GR ++ADEMGLGKTIQAIAVA +++ WP+LI+
Sbjct: 27 DFLPDRLRAKLLPFQKDGIIFALQRNGRCMVADEMGLGKTIQAIAVAYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I++W+ + P EI V+ N++ +S+ +K + GL +
Sbjct: 87 PSSLRYPWTEEIEKWIPELSPEEINVI------QNKTDVRRIST-SKVTVLGYGLLTTDA 139
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
++ L N FK+VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL RP
Sbjct: 140 ETLIDALNN----QKFKVVIVDESHYMKSRNATRSKILLPVVQKARRAILLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q+EAL+P + +Y RYC + FG +GASN +ELH L+ + +MI
Sbjct: 196 EELFMQIEALFPQKFGRWTDYAKRYCNAHIRYFGKRPQWDCRGASNLQELHQLL-SDIMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +VL QLP K RQ++ D+ +++ F E + + + + E V L
Sbjct: 255 RRLKTEVLTQLPPKIRQRIPFDLPSAAAKELNTSFEEWKKLM-RTPNSRGMETVMGL--- 310
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
I +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K I
Sbjct: 311 ----ITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYI 366
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG + Q
Sbjct: 367 RIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQ 426
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
AEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 427 AEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQA 479
>gi|358336414|dbj|GAA54929.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Clonorchis
sinensis]
Length = 1159
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 206/510 (40%), Positives = 301/510 (59%), Gaps = 38/510 (7%)
Query: 157 PDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDV 216
P ++ D +P + L PFQR+GV AL GR+LLAD+MGLGKTIQA+AVA +R
Sbjct: 537 PTVKNLTDYLPGDLVRVLFPFQREGVSLALARSGRVLLADDMGLGKTIQALAVAAAYRSD 596
Query: 217 WPVLILTPSSLRLHWAAMIQQWLNIP----PSEIVVVLSQLGGSNRSGFTIVSSNTKRNI 272
WP+LI+ PSS+R W +WL+ P ++I+VV + G + G ++ T R
Sbjct: 597 WPLLIVAPSSVRFSWRDQCLRWLSGPLRITSADILVVAN---GRDMEG---INQYTTR-- 648
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
L IISYD++ K L +F ++I DESHFLKN++A RT A +P++K + LL
Sbjct: 649 ----LITIISYDLMAKHAEQLRLCHFGVIIMDESHFLKNSKASRTKAAIPLLKATKRVLL 704
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKN-VHEYGNRYC--KGGVFGI-YQGASNHEELHNL 388
LSGTPA+SRP EL+ Q+ + P++++ HE+G RYC K +G Y G S+ EL +
Sbjct: 705 LSGTPAVSRPAELYSQISGVAPNLFRGGFHEFGLRYCAAKECPWGWDYTGCSHMTELQLI 764
Query: 389 MKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVK-GKIKACKSEE 447
++ ++MIRRLK DVL+QLP KRR+ V LD V+K G++K
Sbjct: 765 LEESIMIRRLKSDVLSQLPPKRRELVVLDP---------------NVIKAGRLKFHAKRM 809
Query: 448 EVQSLKFTEKNL-INKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLF 506
SL E+ + + + ++A K+PA+ Y+ ++E G KFL++AHH +LDA+ L
Sbjct: 810 VTSSLPSDERRAAMLQYFHETASVKVPALQQYVLDLVEVGRKFLVYAHHTEVLDALSNLL 869
Query: 507 LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELS 566
++K + IRIDG T R + +FQ++++ A+LS+ A G GL +TAAS V+FAEL
Sbjct: 870 MEKSIDFIRIDGRTNSEQRSVVCRKFQQEENCLVALLSITAAGTGLNMTAASLVVFAELY 929
Query: 567 WTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
W PG L+QAEDRA+RIGQ SV+V YLLA T DD +W ++ KL L + E
Sbjct: 930 WNPGALVQAEDRAYRIGQQDSVSVRYLLAEGTADDYIWSLIEKKLNVLSKAGLNQETFRT 989
Query: 627 VSSSQIRSSPAKQKTLDSFLKRCNNVDDSE 656
++++ ++ +Q LD F DD E
Sbjct: 990 ADTTRLGTT-VQQSILDFFESELMTDDDEE 1018
>gi|403376129|gb|EJY88044.1| SNF2 family N-terminal domain containing protein [Oxytricha
trifallax]
Length = 1118
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 193/513 (37%), Positives = 309/513 (60%), Gaps = 36/513 (7%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWP 218
++ + +Q+P+ ++ KL FQ+ G++F + H GR+LL DEMG+GKT+QAI+++ ++ WP
Sbjct: 299 IKPRLNQLPSQLQKKLYNFQKVGIQFGVDHYGRLLLGDEMGVGKTVQAISLSYLYQRDWP 358
Query: 219 VLILTPSSLRLHWAAMIQQWL--NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDG 276
VLI++PSSL+ W + +WL I SEI V++ + VSS
Sbjct: 359 VLIISPSSLKYSWRDELMKWLEPKIQASEICVII-------KENQEFVSSEIN------- 404
Query: 277 LFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
F IISY + K+ +L NFK+VI DE+H+LK+ ++KR+ LPII +++ +LL+GT
Sbjct: 405 -FYIISYSLAWKMSELLSQLNFKVVIVDEAHYLKSRESKRSQHLLPIIMRSKRIMLLTGT 463
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATV 393
P L RP E++ L+ L PDV+++ E+G RYC K +FG+ + G SN EL+ L+K +
Sbjct: 464 PMLGRPNEIYNLLKILRPDVFRSFKEFGTRYCNPKETIFGVDWTGQSNMVELNLLLKKCL 523
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL +LP KRRQ++ ++V E+ R+I ++++ + KI EE+ Q L
Sbjct: 524 MIRRLKNEVLFELPAKRRQKIVVNVDERSQRKISKYLKQVKKWEYKI-----EEDFQELD 578
Query: 454 FTEKNLINKI----------YTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
+K N++ Y+ + AK+ + +++T+I+ KFL+FAHH +LD +
Sbjct: 579 KVDKLQANEVEDKYSYILRAYSLTGMAKLKGIQQFIDTLIDGSVKFLLFAHHYDVLDQLE 638
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
+KK V IRIDG R V ++Q + + A+LS+ A G+TLTAAS V+FA
Sbjct: 639 DYIVKKSVSYIRIDGRIDNKKRHEAVKKYQSDNKCQVALLSLTASSQGITLTAASIVVFA 698
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGH-E 622
E++WTPG ++QAEDRAHRIGQ SSV +YY+ T+D +++ ++ K E + ++DG +
Sbjct: 699 EMNWTPGIMVQAEDRAHRIGQTSSVLIYYIYGEGTLDKLIYPRLQVKSEVISTIVDGQKK 758
Query: 623 NSLEVSSSQIRSSPAKQKTLDSFLKRCNNVDDS 655
N ++ S + + +L R +DS
Sbjct: 759 NQFKMESDNNEGRNNNEAGGEYYLVRKRTQNDS 791
>gi|149730550|ref|XP_001489638.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3
[Equus caballus]
Length = 1072
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 195/478 (40%), Positives = 295/478 (61%), Gaps = 33/478 (6%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
++ D +P + +KLLPFQ+DG+ FAL GR ++ADEMGLGKTIQAIA+A +++ WP+L
Sbjct: 24 KQLDFLPDKLRAKLLPFQKDGITFALSRDGRCMVADEMGLGKTIQAIAIAYFYKEEWPLL 83
Query: 221 ILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQ--LGGSNRSGFTIVSSNTKRNIPLDGL 277
I+ PSSLR W +++W+ + P EI V+ ++ +G + S T++
Sbjct: 84 IVVPSSLRYPWTEELEKWIPELGPEEINVIQNKTDVGSISTSKVTVLG------------ 131
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
+ +++ D L + L + NF++VI DESH++K+ A R+ LP+++KA+ A+LL+GTP
Sbjct: 132 YGLLTTDAET-LIDTLNNQNFQVVIVDESHYMKSRNAARSRILLPVVQKAKRAILLTGTP 190
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMK 390
AL RP ELF Q+EAL+P + +Y RYC + FG +GASN ELH L+
Sbjct: 191 ALGRPEELFMQIEALFPQKFGTWTDYAKRYCNARIRYFGKRRQWDCRGASNLNELHQLL- 249
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQ 450
+ +MIRRLK +VL QLP K RQ++ D+ +++ + F E E + + +E
Sbjct: 250 SDIMIRRLKTEVLTQLPPKIRQRIPFDLPAAAAKELNSSFEEWEKLLRAPNSGATE---- 305
Query: 451 SLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKK 509
T LI +I+ +A AK AV DY++ +++ KFL+FAHH ML A + ++
Sbjct: 306 ----TVMGLITRIFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIEN 361
Query: 510 KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTP 569
K IRIDG P + R LV +FQ+ + + A+LS++A G GLT TAA+ V+FAEL W P
Sbjct: 362 KTRYIRIDGSVPSSERIHLVNQFQKDPETRVAILSIQAAGQGLTFTAATHVVFAELYWDP 421
Query: 570 GDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
G + QAEDRAHRIGQ SSVN++YL+A T+D ++W ++ K + G L+G + L+
Sbjct: 422 GHIKQAEDRAHRIGQCSSVNIHYLIAKGTLDTLMWGMLNRKAQVTGSTLNGRKEQLQA 479
>gi|395843290|ref|XP_003794425.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3
[Otolemur garnettii]
Length = 1077
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 195/483 (40%), Positives = 291/483 (60%), Gaps = 37/483 (7%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
++ D +P + + LLPFQ++G+ FAL+ GR ++ADEMGLGKTIQ I++A +++ WP+L
Sbjct: 24 KQLDMLPDKLRANLLPFQKEGITFALRRDGRCMVADEMGLGKTIQGISIAYFYKEEWPLL 83
Query: 221 ILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
I+ PSSLR WA I++W+ + P E+ I+ + T L
Sbjct: 84 IVVPSSLRYPWAEEIEKWIPELGPEEV---------------NIIQNKTDVRRILTSKVT 128
Query: 280 IISYDVVLK----LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
I+ Y ++ L + L + NFK+VI DESH++K+ A R+ LP+++KA A+LL+G
Sbjct: 129 ILGYGLLTTDAKTLIDTLNNQNFKVVIVDESHYMKSRNAARSKILLPMVQKATRAILLTG 188
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNL 388
TPAL RP ELF Q+EAL+P + + ++Y RYC + FG +GASN ELH L
Sbjct: 189 TPALGRPEELFMQIEALFPQKFGSWNDYAKRYCNAHIRYFGKRPQWDCRGASNLNELHQL 248
Query: 389 MKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEE 448
+ + +MIRRLK +VL QLP K RQ++ D+ +++ E E + + +E
Sbjct: 249 L-SDIMIRRLKTEVLTQLPPKIRQRIPFDLLPAAAKELNTSLEEWEKLMRGPNSGATE-- 305
Query: 449 VQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFL 507
T LI +I+ +A AK AV DY++ +++ KFL+FAHH ML A + +
Sbjct: 306 ------TVMGLITRIFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVI 359
Query: 508 KKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSW 567
+ K IRIDG P + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W
Sbjct: 360 ENKTRYIRIDGSVPSSERIQLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYW 419
Query: 568 TPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
PG + QAEDRAHRIGQ SSVN++YL+AN T+D+++W ++ K + G L+G + ++
Sbjct: 420 DPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDNLMWGMLNRKAQVTGSTLNGRKEKIQA 479
Query: 628 SSS 630
S
Sbjct: 480 EES 482
>gi|198430961|ref|XP_002124279.1| PREDICTED: similar to MGC115661 protein [Ciona intestinalis]
Length = 831
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 213/569 (37%), Positives = 330/569 (57%), Gaps = 45/569 (7%)
Query: 62 SLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPF 121
SL D + K + K +L + + + Y+ V+ F+ +P ++ R W+F
Sbjct: 158 SLDDVNHNNT-KCNGKCYLISDTHFEVEMPYNNKAVAIFKSLPSKVYDINTRQWSF---H 213
Query: 122 LSSAEKVLSEISG-YNVEIEN----LHPLVQRAIASASAAPDLRE-KYDQIPAHIESKLL 175
L+ +++S I+ ++ +E L + + I+ A L+E + +E+ L+
Sbjct: 214 LTDYNQLVSSINKEQDLHLETFPSTLLQIFKSKISGAKTDSVLQEFDLSHVDEKVETSLM 273
Query: 176 PFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMI 235
PFQR+GV FAL GRILLAD+MGLGKT+Q+I +A+ +R WP+LI+ PSS+RL W +
Sbjct: 274 PFQREGVNFALSKNGRILLADDMGLGKTVQSICIASYYRSSWPLLIICPSSVRLMWKESL 333
Query: 236 QQWL--NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNIL 293
+WL + ++ V+L+ + NIP + L +ISYD++ K Q
Sbjct: 334 LRWLPSQLEHDDVNVMLT----------------GRDNIPTNSLVTVISYDLLTKHQARF 377
Query: 294 MSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALY 353
+ +K I DESHF+KN + R + ++K ++ LLLSGTPALSRP EL+ Q+ L
Sbjct: 378 EAKKYKCAIVDESHFIKNFKTARAKSATAVLKHTKHLLLLSGTPALSRPSELYTQISTLR 437
Query: 354 PDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKR 410
D++ H++G RYC K +G Y G+SN EL +++ TVM+RR K DVL QLP K
Sbjct: 438 SDLFPYFHQFGLRYCNAKQNTWGWDYSGSSNMTELRLILQETVMLRRTKDDVLHQLPPKL 497
Query: 411 RQQVFLDVA--EKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKN-LINKIYTDS 467
R+ V LDV+ + ++Q R+L ++A +S + L EK+ ++ + + ++
Sbjct: 498 RRTVALDVSIEKASIKQ-----RKL------LEASQSAVNQKGLSAAEKHGILLQYFNET 546
Query: 468 AEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQA 527
A+ K+P + Y+ ++E G KFL+FAHH+ +LD++ KK IRIDG TP RQ
Sbjct: 547 AKFKLPGIKSYVLDLLEGGHKFLLFAHHKSVLDSVETDLNKKGCDYIRIDGSTPSERRQT 606
Query: 528 LVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSS 587
V FQE K A+LS+ A +G+TL +AS V+FAEL W PG L+QAEDR +RIGQ
Sbjct: 607 EVARFQENSSCKVALLSITAANMGITLHSASLVVFAELFWNPGILVQAEDRCYRIGQRDV 666
Query: 588 VNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
VNV+YL+A +T DD++W +++ KLE L +
Sbjct: 667 VNVHYLIAKNTADDLIWQMIKKKLEVLSK 695
>gi|344239524|gb|EGV95627.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Cricetulus
griseus]
Length = 916
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 222/583 (38%), Positives = 328/583 (56%), Gaps = 50/583 (8%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLVQRAI 150
Y L++ F+++ ++ K R W+F L K++++ V+++ L V A
Sbjct: 312 YSEELIALFKQMNSRNYDVKTRKWSF---LLEEHNKLIAKSRDLRQVQLDPLPKTVTLAF 368
Query: 151 ASASAAPDLREKYD-------QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKT 203
AS L K D + A + S L+PFQR+GV FA+ GR+LLAD+MGLGKT
Sbjct: 369 ASQLEKTSLNAKADVPEVDLSGVDAKLVSNLMPFQREGVSFAISKRGRLLLADDMGLGKT 428
Query: 204 IQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFT 262
IQAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G
Sbjct: 429 IQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPENINVVVTGKGRLTA---- 484
Query: 263 IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLP 322
GL NI+S+D++ KL+ L + FK+VI DESHFLKN + R A +P
Sbjct: 485 -------------GLVNIVSFDLLSKLERQLKTP-FKVVIIDESHFLKNIKTARCRAAVP 530
Query: 323 IIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI---YQGA 379
I+K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC Y G+
Sbjct: 531 ILKVAKRVILLSGTPAMSRPAELYTQIIAVRPTFFPQFHTFGLRYCDAKRLPWGWDYSGS 590
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL-EVVKG 438
SN EL L++ +M+RRLK DVL+QLP K+R+ V ++ R AL E+ K
Sbjct: 591 SNLGELKLLLEEAIMLRRLKSDVLSQLPAKQRKMVLVNPGRISTRAKAALDAAAKEMTKD 650
Query: 439 KIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQP 497
K K +K + + +AEAK+P V++Y+ ++E+G KFL+FAHH+
Sbjct: 651 KTKQ------------QQKEALIVFFNRTAEAKVPCVIEYIMDLLESGREKFLVFAHHKV 698
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
+LDA+ + +KKV IRIDG TP A R+ L +FQ AVLS+ A +GLT ++A
Sbjct: 699 VLDAVVKELERKKVQNIRIDGSTPSADREDLCQKFQLSTGHTVAVLSITAANMGLTFSSA 758
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ LG+
Sbjct: 759 DLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVLGEA 818
Query: 618 LDGHENSLEVSSSQ--IRSSPAKQKTLDSFLKRCNNVDDSEHQ 658
N E++ + + P KQKT+ ++ D ++ +
Sbjct: 819 GLSETNFSEMTEATDYLYKDP-KQKTIYDLFQQSFEEDGNDME 860
>gi|117646914|emb|CAL37572.1| hypothetical protein [synthetic construct]
Length = 1077
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/473 (41%), Positives = 288/473 (60%), Gaps = 29/473 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAI + +++ WP+LI+
Sbjct: 27 DFLPDRLRAKLLPFQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I++W+ + P EI V+ N++ +S+ +K + GL +
Sbjct: 87 PSSLRYPWTEEIEKWIPELSPEEINVI------QNKTDVRRMST-SKVTVLGYGLLTADA 139
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
++ L N NFK+VI DESH++K+ A R+ LPI++KA+ A+LL+GTPAL RP
Sbjct: 140 KTLIDALNN----QNFKVVIVDESHYMKSRNATRSRILLPIVQKARRAILLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q+EAL+P + +Y RYC + FG +GASN ELH L+ + +MI
Sbjct: 196 EELFMQIEALFPQKFGRWTDYAKRYCNAHIRYFGKRPQWDCRGASNLNELHQLL-SDIMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +VL QLP K RQ++ D+ +++ F E E + + E T
Sbjct: 255 RRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAME--------T 306
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K I
Sbjct: 307 VMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYI 366
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG + Q
Sbjct: 367 RIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQ 426
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
AEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 427 AEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQA 479
>gi|117646930|emb|CAL37580.1| hypothetical protein [synthetic construct]
Length = 1077
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/473 (41%), Positives = 288/473 (60%), Gaps = 29/473 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAI + +++ WP+LI+
Sbjct: 27 DFLPDRLRAKLLPFQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I++W+ + P EI V+ N++ +S+ +K + GL +
Sbjct: 87 PSSLRYPWTEEIEKWIPELSPEEINVI------QNKTDVRRMST-SKVTVLGYGLLTADA 139
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
++ L N NFK+VI DESH++K+ A R+ LPI++KA+ A+LL+GTPAL RP
Sbjct: 140 KTLIDALNN----QNFKVVIVDESHYMKSRNATRSRILLPIVQKARRAILLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q+EAL+P + +Y RYC + FG +GASN ELH L+ + +MI
Sbjct: 196 EELFMQIEALFPQKFGRWTDYAKRYCNAHIRYFGKRPQWDCRGASNLNELHQLL-SDIMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +VL QLP K RQ++ D+ +++ F E E + + E T
Sbjct: 255 RRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAME--------T 306
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K I
Sbjct: 307 VMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYI 366
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG + Q
Sbjct: 367 RIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQ 426
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
AEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 427 AEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQA 479
>gi|62860046|ref|NP_115519.2| DNA annealing helicase and endonuclease ZRANB3 [Homo sapiens]
gi|74741477|sp|Q5FWF4.2|ZRAB3_HUMAN RecName: Full=DNA annealing helicase and endonuclease ZRANB3;
AltName: Full=Annealing helicase 2; Short=AH2; AltName:
Full=Zinc finger Ran-binding domain-containing protein
3; Includes: RecName: Full=DNA annealing helicase
ZRANB3; Includes: RecName: Full=Endonuclease ZRANB3
gi|66840172|gb|AAH89429.2| Zinc finger, RAN-binding domain containing 3 [Homo sapiens]
Length = 1079
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/473 (41%), Positives = 288/473 (60%), Gaps = 29/473 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAI + +++ WP+LI+
Sbjct: 27 DFLPDRLRAKLLPFQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I++W+ + P EI V+ N++ +S+ +K + GL +
Sbjct: 87 PSSLRYPWTEEIEKWIPELSPEEINVI------QNKTDVRRMST-SKVTVLGYGLLTADA 139
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
++ L N NFK+VI DESH++K+ A R+ LPI++KA+ A+LL+GTPAL RP
Sbjct: 140 KTLIDALNN----QNFKVVIVDESHYMKSRNATRSRILLPIVQKARRAILLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q+EAL+P + +Y RYC + FG +GASN ELH L+ + +MI
Sbjct: 196 EELFMQIEALFPQKFGRWTDYAKRYCNAHIRYFGKRPQWDCRGASNLNELHQLL-SDIMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +VL QLP K RQ++ D+ +++ F E E + + E T
Sbjct: 255 RRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAME--------T 306
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K I
Sbjct: 307 VMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYI 366
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG + Q
Sbjct: 367 RIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQ 426
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
AEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 427 AEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQA 479
>gi|354473642|ref|XP_003499043.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Cricetulus griseus]
Length = 899
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 222/583 (38%), Positives = 328/583 (56%), Gaps = 50/583 (8%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLVQRAI 150
Y L++ F+++ ++ K R W+F L K++++ V+++ L V A
Sbjct: 295 YSEELIALFKQMNSRNYDVKTRKWSF---LLEEHNKLIAKSRDLRQVQLDPLPKTVTLAF 351
Query: 151 ASASAAPDLREKYD-------QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKT 203
AS L K D + A + S L+PFQR+GV FA+ GR+LLAD+MGLGKT
Sbjct: 352 ASQLEKTSLNAKADVPEVDLSGVDAKLVSNLMPFQREGVSFAISKRGRLLLADDMGLGKT 411
Query: 204 IQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFT 262
IQAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G
Sbjct: 412 IQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPENINVVVTGKGRLTA---- 467
Query: 263 IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLP 322
GL NI+S+D++ KL+ L + FK+VI DESHFLKN + R A +P
Sbjct: 468 -------------GLVNIVSFDLLSKLERQLKTP-FKVVIIDESHFLKNIKTARCRAAVP 513
Query: 323 IIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI---YQGA 379
I+K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC Y G+
Sbjct: 514 ILKVAKRVILLSGTPAMSRPAELYTQIIAVRPTFFPQFHTFGLRYCDAKRLPWGWDYSGS 573
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL-EVVKG 438
SN EL L++ +M+RRLK DVL+QLP K+R+ V ++ R AL E+ K
Sbjct: 574 SNLGELKLLLEEAIMLRRLKSDVLSQLPAKQRKMVLVNPGRISTRAKAALDAAAKEMTKD 633
Query: 439 KIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQP 497
K K +K + + +AEAK+P V++Y+ ++E+G KFL+FAHH+
Sbjct: 634 KTKQ------------QQKEALIVFFNRTAEAKVPCVIEYIMDLLESGREKFLVFAHHKV 681
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
+LDA+ + +KKV IRIDG TP A R+ L +FQ AVLS+ A +GLT ++A
Sbjct: 682 VLDAVVKELERKKVQNIRIDGSTPSADREDLCQKFQLSTGHTVAVLSITAANMGLTFSSA 741
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ LG+
Sbjct: 742 DLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVLGEA 801
Query: 618 LDGHENSLEVSSSQ--IRSSPAKQKTLDSFLKRCNNVDDSEHQ 658
N E++ + + P KQKT+ ++ D ++ +
Sbjct: 802 GLSETNFSEMTEATDYLYKDP-KQKTIYDLFQQSFEEDGNDME 843
>gi|332814492|ref|XP_515805.3| PREDICTED: zinc finger Ran-binding domain-containing protein 3 [Pan
troglodytes]
gi|410211198|gb|JAA02818.1| zinc finger, RAN-binding domain containing 3 [Pan troglodytes]
gi|410265392|gb|JAA20662.1| zinc finger, RAN-binding domain containing 3 [Pan troglodytes]
gi|410294334|gb|JAA25767.1| zinc finger, RAN-binding domain containing 3 [Pan troglodytes]
Length = 1079
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 197/473 (41%), Positives = 288/473 (60%), Gaps = 29/473 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAI + +++ WP+LI+
Sbjct: 27 DFLPDRLRAKLLPFQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I++W+ + P EI V+ N++ +S+ +K + GL +
Sbjct: 87 PSSLRYPWTEEIEKWIPELSPEEINVI------QNKADVRRMST-SKVTVLGYGLLTADA 139
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
++ L N NFK+VI DESH++K+ A R+ LPI++KA+ A+LL+GTPAL RP
Sbjct: 140 KTLIDALNN----QNFKVVIVDESHYMKSRNATRSRILLPIVQKARRAILLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q+EAL+P + +Y RYC + FG +GASN ELH L+ + +MI
Sbjct: 196 EELFMQIEALFPQKFGRWTDYAKRYCNAHIRYFGKRPQWDCRGASNLNELHQLL-SDIMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +VL QLP K RQ++ D+ +++ F E E + + E T
Sbjct: 255 RRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAME--------T 306
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K I
Sbjct: 307 VMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYI 366
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG + Q
Sbjct: 367 RIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQ 426
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
AEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 427 AEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQA 479
>gi|344268549|ref|XP_003406120.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1
[Loxodonta africana]
Length = 960
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 239/629 (37%), Positives = 347/629 (55%), Gaps = 56/629 (8%)
Query: 52 PLSVAPAPKGSLGDFSKEQV---PKLSVKF-----FLHTSGNIAAKFTYDPVLVSAFRKI 103
PL A K S S Q P S+ F L + A +Y LV+ F+++
Sbjct: 306 PLEGANGSKESASTSSGAQASLPPARSLAFVKGQCMLISRARFEADISYSEDLVALFKQL 365
Query: 104 PKATWNAKERLWTFPVPFLSSAEKVLSEISGY--NVEIENLHPLVQRAIASASAAPDLRE 161
++ K R W F L +L E Y V+++ L + +A AS L
Sbjct: 366 DSRKYDFKTRKWNF----LLEEHNILVEKVRYLPQVQLDPLPKTIVQAFASQLQKTSLHL 421
Query: 162 KYDQ-------IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFR 214
D + A + S L+PFQR GV FA+ GR+LLAD+MGLGKTIQAI +A +R
Sbjct: 422 TEDTPEADLSGVDAKLVSSLMPFQRAGVNFAIAKRGRLLLADDMGLGKTIQAICIAAFYR 481
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
WP+L++ PSS+R W +WL ++ PS I VV+ T ++
Sbjct: 482 REWPLLVVVPSSVRFTWEQAFLRWLPSLRPSCINVVV-----------------TGKDHL 524
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
GL NI+S+D++ KL+ L + FK+VI DESHFLKN++ R A +PI+K A+ +LL
Sbjct: 525 TAGLVNIVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNSRTARCRAAMPILKVAKRVILL 583
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMK 390
SGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G Y G+SN EL L++
Sbjct: 584 SGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRQPWGWDYSGSSNLNELKLLLE 643
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQ 450
+M+RRLK DVL+QLP K+R+ V + + + R AL + + K K + ++E
Sbjct: 644 EAIMLRRLKSDVLSQLPAKQRKMVVVAPGQINARARAALDAAAKEMTTKDKTKRQQKEAL 703
Query: 451 SLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKK 509
L F + +AEAKIP+V++Y+ ++E+G KFL+FAHH+ +LDAI +K
Sbjct: 704 LLFFNK----------TAEAKIPSVIEYILDLLESGKEKFLVFAHHKVVLDAITNELERK 753
Query: 510 KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTP 569
VH IRIDG T A R++L +FQ + AVLS+ A +GLT ++A V+FAEL W P
Sbjct: 754 HVHHIRIDGSTSSADRESLCQQFQLSERHTVAVLSITAANMGLTFSSADLVVFAELFWNP 813
Query: 570 GDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN--SLEV 627
G L+QAEDR HR+GQ +SV V+YL+A +T DD +W +++ K++ LG+ N L
Sbjct: 814 GVLMQAEDRVHRVGQTNSVGVHYLVARNTADDYLWPMIQEKIKVLGEAGLSETNFSDLTE 873
Query: 628 SSSQIRSSPAKQKTLDSFLKRCNNVDDSE 656
++ P +QK D F K D S+
Sbjct: 874 ATDYFCKDPKQQKIYDLFQKSFEEEDRSD 902
>gi|397504563|ref|XP_003822857.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger Ran-binding
domain-containing protein 3 [Pan paniscus]
Length = 1079
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 197/472 (41%), Positives = 288/472 (61%), Gaps = 29/472 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAI + +++ WP+LI+
Sbjct: 27 DFLPDRLRAKLLPFQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I++W+ + P EI V+ N++ +S+ +K + GL +
Sbjct: 87 PSSLRYPWTEEIEKWIPELSPEEINVI------QNKTDVRRMST-SKVTVLGYGLLTADA 139
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
++ L N NFK+VI DESH++K+ A R+ LPI++KA+ A+LL+GTPAL RP
Sbjct: 140 KTLIDALNN----QNFKVVIVDESHYMKSRNATRSRILLPIVQKARRAILLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q+EAL+P + +Y RYC + FG +GASN ELH L+ + +MI
Sbjct: 196 EELFMQIEALFPQKFGRWTDYAKRYCNAHIRYFGKRPQWDCRGASNLNELHQLL-SDIMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +VL QLP K RQ++ D+ +++ F E E + + E T
Sbjct: 255 RRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAME--------T 306
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K I
Sbjct: 307 VMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYI 366
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG + Q
Sbjct: 367 RIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQ 426
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
AEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 427 AEDRAHRIGQCSSVNIHYLIANGTLDILMWGMLNRKAQVTGSTLNGRKEKIQ 478
>gi|410334213|gb|JAA36053.1| zinc finger, RAN-binding domain containing 3 [Pan troglodytes]
Length = 1079
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 197/473 (41%), Positives = 288/473 (60%), Gaps = 29/473 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAI + +++ WP+LI+
Sbjct: 27 DFLPDRLRAKLLPFQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I++W+ + P EI V+ N++ +S+ +K + GL +
Sbjct: 87 PSSLRYPWTEEIEKWIPELSPEEINVI------QNKADVRRMST-SKVTVLGYGLLTADA 139
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
++ L N NFK+VI DESH++K+ A R+ LPI++KA+ A+LL+GTPAL RP
Sbjct: 140 KTLIDALNN----QNFKVVIVDESHYMKSRNATRSRILLPIVQKARRAILLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q+EAL+P + +Y RYC + FG +GASN ELH L+ + +MI
Sbjct: 196 EELFMQIEALFPQKFGRWTDYAKRYCNAHIRYFGKRPQWDCRGASNLNELHQLL-SDMMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +VL QLP K RQ++ D+ +++ F E E + + E T
Sbjct: 255 RRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAME--------T 306
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K I
Sbjct: 307 VMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYI 366
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG + Q
Sbjct: 367 RIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQ 426
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
AEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 427 AEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQA 479
>gi|343960649|dbj|BAK61914.1| zinc finger RAN-binding domain-containing protein 3 [Pan
troglodytes]
Length = 526
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 197/472 (41%), Positives = 288/472 (61%), Gaps = 29/472 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAI + +++ WP+LI+
Sbjct: 27 DFLPDRLRAKLLPFQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I++W+ + P EI V+ N++ +S+ +K + GL +
Sbjct: 87 PSSLRYPWTEEIEKWIPELSPEEINVI------QNKADVRRMST-SKVTVLGYGLLTADA 139
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
++ L N NFK+VI DESH++K+ A R+ LPI++KA+ A+LL+GTPAL RP
Sbjct: 140 KTLIDALNN----QNFKVVIVDESHYMKSRNATRSRILLPIVQKARRAILLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q+EAL+P + +Y RYC + FG +GASN ELH L+ + +MI
Sbjct: 196 EELFMQIEALFPQKFGRWTDYAKRYCNAHIRYFGKRPQWDCRGASNLNELHQLL-SDMMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +VL QLP K RQ++ D+ +++ F E E + + E T
Sbjct: 255 RRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAME--------T 306
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K I
Sbjct: 307 VMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYI 366
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG + Q
Sbjct: 367 RIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGRIKQ 426
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
AEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 427 AEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQ 478
>gi|296205540|ref|XP_002749811.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1
[Callithrix jacchus]
Length = 957
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 224/575 (38%), Positives = 332/575 (57%), Gaps = 46/575 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A +Y L++ F+++ ++ K R W+F L K++++ V+++ L +
Sbjct: 348 ADISYSQDLIALFKQMDSRRYDVKTRKWSF---LLEEHNKLITKARCLPQVQLDPLPTTL 404
Query: 147 QRAIASA------SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS + PD+ E ++ + S L+PFQR GV FA+ GGR+LLAD+MG
Sbjct: 405 TLAFASQLKKTSLNPTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMG 464
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G +R
Sbjct: 465 LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVT---GKDR 521
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN++ R
Sbjct: 522 L--------------TAGLVNIVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNSRTARCR 566
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA SRP EL+ Q+ A+ P + H +G RYC K +G
Sbjct: 567 AAMPVLKIAKRVILLSGTPATSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWD 626
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V + + AL +
Sbjct: 627 YSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVVAPGRINASARAALDAAAKE 686
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
+ K K + ++E L F +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 687 MTTKDKTKQQQKEALILFFNR----------TAEAKIPSVIEYIMDLLESGKEKFLVFAH 736
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +LDA+ + +KKV IRIDG T A R+ L +FQ AVLS+ A +GLT
Sbjct: 737 HKVVLDAVMKELERKKVPHIRIDGSTSSAEREDLCQQFQLSQRHAVAVLSITAANMGLTF 796
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
++A V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ L
Sbjct: 797 SSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVL 856
Query: 615 GQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
G+ N E++ + + P +QK D F K
Sbjct: 857 GEAGLSETNFSEMTEATDYLYKDPKQQKIYDLFQK 891
>gi|432934245|ref|XP_004081926.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Oryzias latipes]
Length = 893
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 210/539 (38%), Positives = 314/539 (58%), Gaps = 44/539 (8%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYN-VEIENLHPLVQRAI 150
Y ++ AF+++P +++ R W+F L+ +L ISG VE+E L + +A
Sbjct: 297 YHADVIGAFKQMPTKSYDMNTRKWSFS---LTDYGGLLDLISGIAAVEVEPLPRAIIQAF 353
Query: 151 AS----ASAAP-DLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTI 204
A+ + A P D+ E I + S L+PFQR+GV FA+ GR+LLAD+MGLGKT+
Sbjct: 354 AARFDGSEARPSDIPEADLSSIDPALTSSLMPFQREGVNFAVAKQGRLLLADDMGLGKTV 413
Query: 205 QAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTI 263
QAI +A +R+ WP+L++ PSS+R WA ++WL ++ P I VV+
Sbjct: 414 QAICIAAYYRNEWPLLVVAPSSVRFTWAEAFRRWLPSLSPDCINVVVK------------ 461
Query: 264 VSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPI 323
++ GL NI+SYD++ ++ F ++I DESHFLKN + R A LP+
Sbjct: 462 -----AKDRLRSGLVNIVSYDLLNRMDKQHPGQPFNVLIMDESHFLKNMKTARCKAALPL 516
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGAS 380
+K A+ +LLSGTPA+SRP EL+ Q+ A+ P ++ HE+G RYC + +G Y G+S
Sbjct: 517 LKAAKRVILLSGTPAMSRPCELYTQILAVRPTLFPRFHEFGLRYCDAREKPWGWDYSGSS 576
Query: 381 NHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR-QIYALFRELEVVKGK 439
N EL L++ +M+RRLK +VL+QLP K+R+ V + + + R + E+ +
Sbjct: 577 NLGELKLLLEDCLMLRRLKSEVLSQLPAKQRKVVTVTIDGVNTRIKAALSAAAAELTRN- 635
Query: 440 IKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPM 498
K EK + Y +AEAK A+++Y+ ++E+G KFL+FAHH+ +
Sbjct: 636 ----------HRSKIEEKEALLVFYNHTAEAKQQAIMEYITDMLESGREKFLVFAHHKSV 685
Query: 499 LDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAS 558
LD I F + + IRIDG TP A RQ L +FQ AVLS+ A +G+TL A
Sbjct: 686 LDHITSSFHHQGISYIRIDGSTPSAERQQLCEKFQYSTKTCVAVLSITAANMGITLHTAD 745
Query: 559 TVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
VIFAEL W PG LIQAEDR HRIGQ ++VN++YL+A T DD +W ++++K+ L +V
Sbjct: 746 LVIFAELFWNPGVLIQAEDRVHRIGQTNNVNIHYLVAKGTADDHLWPMIQAKMNVLEKV 804
>gi|348506836|ref|XP_003440963.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
[Oreochromis niloticus]
Length = 1148
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 201/477 (42%), Positives = 291/477 (61%), Gaps = 25/477 (5%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
E+ +P + +L+PFQR+GV FAL GR ++ADEMGLGKT+QAIAVA FR WP+L
Sbjct: 17 EQLSGLPHKLLQRLMPFQREGVEFALSRNGRCMIADEMGLGKTVQAIAVAYAFRQEWPLL 76
Query: 221 ILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
++ PSSL+ W +++W+ + P +I +V N+S T+ ++K + GL
Sbjct: 77 VVVPSSLKYPWIEELERWIPELQPGDISLV------ENKS-HTMGIGSSKVTVLGYGLLT 129
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
+ +V L F +V+ DESH+LK+ A RT +P+I+ A+ A+LL+GTPAL
Sbjct: 130 TDARPLV----EALSRQRFAVVVVDESHYLKSRNAARTKILVPLIQSAKRAILLTGTPAL 185
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGIYQ-----GASNHEELHNLMKAT 392
RP ELF Q++ALYP + +Y +YC FG ++ GASN EELH + +
Sbjct: 186 GRPEELFMQIDALYPKRFGTWTDYAKKYCNAHYRYFGPHRQWDCRGASNLEELHQRL-SQ 244
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL 452
+MIRRLK DVL+QLP K RQ++ D+ ++ ++ A F E E + +K+ S
Sbjct: 245 IMIRRLKADVLSQLPPKIRQRIPFDLPKEAAKEALASFGEWERL---MKSLGSGVATTDN 301
Query: 453 KFTE-KNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKK 510
FTE L+ ++Y +A AK AV DY++ ++EA KFL+FAHH ML A + ++ K
Sbjct: 302 PFTEVMGLVTQMYKQTAIAKAGAVKDYIKMMLEAEQLKFLVFAHHLTMLQACTEAVIEAK 361
Query: 511 VHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPG 570
IRIDG P + R LV +FQ + + + A+LS++A G GLT TAAS V+FAEL W PG
Sbjct: 362 AGYIRIDGSVPSSERIQLVHKFQSEPETRVAILSIQAAGQGLTFTAASHVVFAELYWNPG 421
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
+ QAEDRAHRIGQ SSVNV+YL+A T D ++W ++ K + G L+G + L+
Sbjct: 422 HIKQAEDRAHRIGQTSSVNVHYLIAKGTFDTVMWSMLNRKEKVTGSTLNGRKEYLKA 478
>gi|291392203|ref|XP_002712511.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a-like 1 [Oryctolagus cuniculus]
Length = 954
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 221/595 (37%), Positives = 328/595 (55%), Gaps = 63/595 (10%)
Query: 77 KFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY- 135
+ L + A Y L++ F+++ ++ K R W F L K++ +
Sbjct: 333 RCMLISRARFEADIGYSEDLIALFKQMDSRIYDVKTRKWNF---LLEEHNKLIERVRCLP 389
Query: 136 NVEIENLHPLVQRAIASA------SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQH 188
V+++ L + A AS PD+ E + + + S L+PFQR V FA+
Sbjct: 390 QVQLDPLPKTLVLAFASQVEKTSLHPTPDVPEADLSGVDSKLVSTLMPFQRAAVNFAIAK 449
Query: 189 GGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIV 247
GR+LLAD+MGLGKTIQAI +A +R WP+L++ PSS+R W +WL ++ P +
Sbjct: 450 RGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDRVN 509
Query: 248 VVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESH 307
VV+ T ++ GL NI+S+D++ +L L +++FK+VI DESH
Sbjct: 510 VVV-----------------TGKDCLTAGLVNIVSFDLLSRLDKQLKTASFKVVIIDESH 552
Query: 308 FLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRY 367
FLKN++ R A +P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RY
Sbjct: 553 FLKNSKTARCRAAMPLLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRY 612
Query: 368 C--KGGVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR 424
C K +G Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V
Sbjct: 613 CDAKRQPWGWDYSGSSNLAELKLLLEEAVMLRRLKADVLSQLPAKQRKMVV--------- 663
Query: 425 QIYALFRELEVVKGKIKAC---------KSEEEVQSLKFTEKNLINKIYTDSAEAKIPAV 475
+V G+I A K K +K + + +AEAKIP+V
Sbjct: 664 ----------IVPGRISARARAALDAAAKEMTTTSKTKREQKEALILFFNRTAEAKIPSV 713
Query: 476 LDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE 534
++Y+ ++E+G KFL+FAHH+ +LDAI + +K V IRIDG T A R AL +FQ
Sbjct: 714 IEYILDLLESGREKFLVFAHHKVVLDAITKELERKHVQHIRIDGSTSSADRDALCQQFQL 773
Query: 535 KDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLL 594
+ AVLS+ A +GLT ++A V+FAEL W PG LIQAEDR HRIGQ +SV ++YL+
Sbjct: 774 SERHTVAVLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTNSVGIHYLV 833
Query: 595 ANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
A T DD +W +++ K++ LGQ N E++ + + P +QK D F K
Sbjct: 834 AKGTADDYLWPLIQEKIKVLGQAGLSETNFSEMTEATDYLYKDPKQQKIYDLFQK 888
>gi|444708072|gb|ELW49191.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Tupaia chinensis]
Length = 1037
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 214/554 (38%), Positives = 314/554 (56%), Gaps = 51/554 (9%)
Query: 101 RKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLR 160
R K++WN R T +V+S + ++E + +++S + P+
Sbjct: 469 RNYGKSSWNLYPRRKTH-------FSRVISVTLAFASQLE------KTSLSSTADVPE-- 513
Query: 161 EKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
++ + S L+PFQR GV FA+ GGR+LLAD+MGLGKTIQAI +A +R WP+L
Sbjct: 514 ADLSEVDPKLVSSLMPFQRAGVNFAVAKGGRLLLADDMGLGKTIQAICIAAVYRKEWPLL 573
Query: 221 ILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
++ PSS+R W ++WL ++ P I VV+ T ++ GL N
Sbjct: 574 VVVPSSVRFTWEQAFRRWLPSLSPDRINVVV-----------------TGKDRLTAGLVN 616
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
I+S+D++ KL+ L + FK+VI DESHFLKN + R A +PI+K A+ +LLSGTPA+
Sbjct: 617 IVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNLKTARCRAAMPILKVAKRVILLSGTPAM 675
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI---YQGASNHEELHNLMKATVMIR 396
SRP EL+ Q+ A+ P + H +G RYC Y G+SN EL L++ VM+R
Sbjct: 676 SRPAELYSQIIAVKPTFFPQFHAFGLRYCDAKRLSWGWDYSGSSNLGELKLLLEEAVMLR 735
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTE 456
RLK DVL+QLP K+R+ V + A R V+ + E K +
Sbjct: 736 RLKSDVLSQLPAKQRKMV-----------VVAPGRISASVRAALDTAAKEMTTDKTKKQQ 784
Query: 457 KNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
K + + +AEAKIP+V++Y+ ++E+G KFL+FAHH+ +LDAI + KK V IR
Sbjct: 785 KEALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAHHKVVLDAITKALEKKHVQHIR 844
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
IDG T A R+ L +FQ + AVLS+ A +GLTL++A V+FAEL W PG L+QA
Sbjct: 845 IDGSTSSADREDLCQQFQLSERHAVAVLSITAANMGLTLSSADLVVFAELFWNPGVLMQA 904
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ--IR 633
EDR HRIGQ SSV ++YL+A T DD +W +++ K++ LG+ N E++ + +
Sbjct: 905 EDRVHRIGQTSSVGIHYLVARGTADDYLWPMIQEKIKVLGEAGLSETNFSEMTEATDYLY 964
Query: 634 SSPAKQKTLDSFLK 647
P + K D F K
Sbjct: 965 KDPKQLKIYDLFQK 978
>gi|427785507|gb|JAA58205.1| Putative chromatin remodeling protein harp/smarcal1 dead-box
superfamily [Rhipicephalus pulchellus]
Length = 678
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 219/575 (38%), Positives = 319/575 (55%), Gaps = 69/575 (12%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPL------ 145
Y ++ FR +P ++A+++ W+F I+ +N +E L L
Sbjct: 126 YHQQMIEIFRTMPSRKYDAEKKRWSF-------------HITCHNNLMEKLKCLRPAVLV 172
Query: 146 --VQRAIASA-SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLG 201
+ R + A S P+ E + + +E LLPFQ+DGVR A+ GRIL+AD+MGLG
Sbjct: 173 AEIPRHVLRAFSETPENYEVSLNSLDCKLEQALLPFQKDGVRTAVLRKGRILIADDMGLG 232
Query: 202 KTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
KTIQ IA+A +R+ WPVL++TPSS+R W +W+ PS N+
Sbjct: 233 KTIQGIAIAAYYREEWPVLVVTPSSVRFTWKEAFLRWM---PS-----------LNQDQV 278
Query: 262 TIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATL 321
T++ + + P + I SYD++ K L F +V+ DESHF+KN++ RT A
Sbjct: 279 TVLVTGSDSVSPCHQVI-ITSYDLLTKKTEDL-CGKFNVVLLDESHFIKNSKTARTKACQ 336
Query: 322 PIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG--GVFGI-YQG 378
+ KA+ +LL+GTPALSRPIEL+ Q+ A+ P + ++HE+G RYC G +G + G
Sbjct: 337 KALSKAKRVVLLTGTPALSRPIELYTQICAVQPKCFSSMHEFGIRYCNGKKNQWGWDFSG 396
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLD---VAEKDMRQIYALFRELEV 435
+SN EL ++ TVMIRRLK DVL+QLP K+RQ V LD V D + + + RE+
Sbjct: 397 SSNMHELQLFLEKTVMIRRLKSDVLSQLPAKQRQVVLLDPSHVKTTD-KVLQHMAREMHN 455
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHH 495
K K+ ++ ++ + ++ K+ AV Y+E ++E KFL FAHH
Sbjct: 456 TKLKV-------------MEKRGVLLTYFRETGIHKVKAVCKYIEDLVEGDQKFLCFAHH 502
Query: 496 QPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLT 555
Q +LD+I L +K IRIDG T R+ L +FQ D K AVLS+ A G+TL+
Sbjct: 503 QVVLDSICDLLNRKNCSHIRIDGKTSSELRKQLCDKFQYNDMCKVAVLSITAANAGITLS 562
Query: 556 AASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLG 615
+AS VIFAEL W PG L QAEDR HRIGQ + V + YL+A T DD +W +V +KL+ LG
Sbjct: 563 SASLVIFAELFWNPGILTQAEDRVHRIGQQNCVVIQYLVAKGTADDYIWPLVCNKLDTLG 622
Query: 616 QVLDGHEN----SLEVSSSQIRSSPAKQKTLDSFL 646
+ ++ L++S+ Q KQ TL+ F
Sbjct: 623 KAGLSKDSFYDVDLKISADQ------KQPTLEDFF 651
>gi|145542730|ref|XP_001457052.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424866|emb|CAK89655.1| unnamed protein product [Paramecium tetraurelia]
Length = 767
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 183/473 (38%), Positives = 290/473 (61%), Gaps = 26/473 (5%)
Query: 163 YDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
Y+QI +E L +Q+D V+ L+ GRIL+AD+MG+GKT+Q++A+A+ ++ WP+LI+
Sbjct: 122 YEQIDKTLEDTLYEYQKDCVKQGLKFNGRILIADDMGVGKTVQSLALASMYKQNWPLLIM 181
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PS LRL+W I WL I ++I QL R G I ++ ++S
Sbjct: 182 CPSPLRLNWQDEIIHWLKIHKTDI-----QLINCGREG-----------IRMNAKIVVVS 225
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
YD+ K+++ LM+ F+I IADE H+LK+ + R+ +PI+++ +LL+GTPALS+P
Sbjct: 226 YDICAKIKDNLMNRKFQICIADECHYLKSPSSIRSQVCVPILRQCMQTILLTGTPALSKP 285
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYC--KGGVF--GI-YQGASNHEELHNLMKATVMIRR 397
+LF L + PD++ N E+G RYC K F GI + GASN +EL+ L++ +MIRR
Sbjct: 286 KDLFNLLNIIRPDIFGNFKEFGYRYCDPKLSRFTKGIDFDGASNLKELYFLLRNYIMIRR 345
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVK-----GKIKACKSEEEVQSL 452
KKDVL+QLP KRR +V + ++QI AL +L + K + +++
Sbjct: 346 QKKDVLSQLPEKRRVKVRIPGETSQVKQIGALLNQLGNIDIQQLINKDTIFQEQKDQSEQ 405
Query: 453 KFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T +++ K Y + +AKI A+ DY+ T+ E KFL FAHHQ +LDA+ + ++ ++
Sbjct: 406 LLTINSILQKCYMLTGQAKIKAIKDYICTLFENEIKFLFFAHHQDVLDAVQEYCVQNEIQ 465
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
+RIDG R V FQ D+++ A+LS+ + G+TLTAAST++F E+ WTP +
Sbjct: 466 YMRIDGNVGVEQRHLNVQMFQNNDEIRIAILSVTSANYGITLTAASTIVFGEMHWTPAIM 525
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSL 625
+QAEDRAHRIGQV V+ +YL+ + T+DD +++ + +K+ + +DG + +L
Sbjct: 526 LQAEDRAHRIGQVQCVDCHYLIGDGTLDDHIFNKIENKMNTVSNFIDGQKQNL 578
>gi|417405377|gb|JAA49400.1| Putative chromatin remodeling protein harp/smarcal1 dead-box
superfamily [Desmodus rotundus]
Length = 947
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 234/626 (37%), Positives = 344/626 (54%), Gaps = 56/626 (8%)
Query: 37 PSYKVEALPQGSRTLPLSVAPAPKGSLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVL 96
P+ ++ L S P + PAP SL F + Q L + A +Y L
Sbjct: 297 PTVTLQPLEGASSVAPTGLPPAP--SLA-FVRGQC-------LLISRARFEADISYSQEL 346
Query: 97 VSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLVQRAIASASA 155
++ F+++ ++AK R W F L K++ + V++ L + A AS
Sbjct: 347 IAVFKQMDSRNYDAKTRKWNF---LLEEHNKLIERVRCLPQVQLSPLPKTLTLAFASQME 403
Query: 156 APDLREKYDQIPAHIE-------SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIA 208
L D A + S LLPFQR GV FA+ GGR+LLAD+MGLGKTIQAI
Sbjct: 404 KTSLGLTADVPEADLSGVDPKLVSNLLPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAIC 463
Query: 209 VATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSN 267
+A +R WP+L++ PSS+R W QWL ++ P I VV++ G +R
Sbjct: 464 IAAFYRKEWPLLVVVPSSVRFTWEQAFLQWLPSLNPEHINVVVT---GKDRL-------- 512
Query: 268 TKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKA 327
GL NI+S+D++ KL+ + + FK+VI DESHFLKN + R A +P++K A
Sbjct: 513 ------TAGLVNIVSFDLLSKLEK-QIKTPFKVVIIDESHFLKNIKTARCRAAMPLLKVA 565
Query: 328 QYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEE 384
+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G Y G+S+ E
Sbjct: 566 KRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKKHAWGWDYSGSSSLGE 625
Query: 385 LHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACK 444
L L++ VM+RRLK DVL+QLP K+R+ V + +I A R K K
Sbjct: 626 LKLLLEEAVMLRRLKADVLSQLPAKQRKMVVVAPG-----RISAKARASLNAAAKEMTTK 680
Query: 445 SEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIH 503
+ + Q ++ + + +AEAKIP V++Y+ ++E+G KFL+FAHH+ +LDA+
Sbjct: 681 DQSKGQ-----QRAALILYFNRTAEAKIPCVIEYILDLLESGREKFLVFAHHKVVLDAVT 735
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
+ KK+V IRIDG T A R +L +FQ AVLS+ A +GLT ++A V+FA
Sbjct: 736 EALEKKQVQHIRIDGSTSSADRDSLCQQFQLSKGHAVAVLSITAANMGLTFSSADLVVFA 795
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ--VLDGH 621
EL W PG L+QAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ LG+ V +
Sbjct: 796 ELFWNPGVLMQAEDRVHRIGQSSSVGIHYLVARGTADDYLWPLIQEKIKVLGEAGVSEAS 855
Query: 622 ENSLEVSSSQIRSSPAKQKTLDSFLK 647
+ + ++ I P ++K D F K
Sbjct: 856 FSEMTEATDYIYKDPTQRKIYDLFQK 881
>gi|145481069|ref|XP_001426557.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393632|emb|CAK59159.1| unnamed protein product [Paramecium tetraurelia]
Length = 746
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 191/495 (38%), Positives = 300/495 (60%), Gaps = 41/495 (8%)
Query: 163 YDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
Y+QI + L +QRD ++ L+ GRIL+AD+MG+GKT+Q++A+A+ ++ WP+LI+
Sbjct: 116 YEQIDKALHENLYQYQRDCIKQGLKFNGRILIADDMGVGKTVQSLALASMYKQNWPLLIM 175
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PS LRL+W I WL I ++I QL S R G I ++ I+S
Sbjct: 176 CPSPLRLNWQDEIIHWLKIYKTDI-----QLINSGREG-----------IRMNAKIVIVS 219
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
YD+V K+++ LMS F+I IADE H+LK+ A R+ A +PI+++ +LL+GTPALS+P
Sbjct: 220 YDIVSKIKDSLMSRKFQICIADECHYLKSPSAIRSQACVPILRQCMRTILLTGTPALSKP 279
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVF----GI-YQGASNHEELHNLMKATVMIRR 397
+LF L + PD++ + E+G RYC + GI + GASN +ELH L+ +MIRR
Sbjct: 280 RDLFNLLNIIRPDIFGSFKEFGYRYCDPKLSRYTKGIDFDGASNLKELHFLLTNYIMIRR 339
Query: 398 LKKDVLAQLPVKRRQ--QVFLDVAEKDMRQIY---ALFRELEVVKGKIKACKSEEEVQSL 452
LKKDVL QLP KRRQ + + D++Q+ A+F+E S++ + L
Sbjct: 340 LKKDVLNQLPEKRRQIDALLKQLGNIDIQQLINKDAIFQE-----------SSKDHSEQL 388
Query: 453 KFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
+ +++ K Y + +AKI A+ DY+ T+ E KFL FAHHQ +LDA+ + ++ +
Sbjct: 389 -LSINSILQKCYMLTGQAKIKAIKDYINTLFENEIKFLFFAHHQDVLDAVQEYCVENNIQ 447
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
+RIDG R V FQ + ++ A+LS+ + G+TLTAAST++F E+ WTP +
Sbjct: 448 YMRIDGSVSIEQRHLNVQMFQNNEAIRIAILSVTSANYGITLTAASTIVFGEMHWTPAIM 507
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSL---EVSS 629
+QAEDRAHRIGQV V+ +YL+ + T+DD +++ + +K+ + +DG + +L E S+
Sbjct: 508 MQAEDRAHRIGQVQCVDCHYLIGDGTLDDHIFNKIENKMNTVSNFIDGQKQNLGAQEFSA 567
Query: 630 SQIRSSPAKQKTLDS 644
++I ++ +L S
Sbjct: 568 NEILMKGTQKASLIS 582
>gi|440296361|gb|ELP89188.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
invadens IP1]
Length = 1128
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 198/511 (38%), Positives = 300/511 (58%), Gaps = 35/511 (6%)
Query: 122 LSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYD---QIPAHIESKLLPFQ 178
L + V S++ +++ + V R S+ P D ++P+ + +KL FQ
Sbjct: 69 LKKYDSVFSQLRSTGLKVREIPNEVMRHFNSSQNTPQTTNFDDIQKRLPSALRTKLKDFQ 128
Query: 179 RDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQW 238
+DG F +QH GR L+ADEMGLGKT+QAI++A+ ++ WP+L++ PSS+R +W I +
Sbjct: 129 KDGFLFGIQHEGRCLIADEMGLGKTLQAISIASYYQREWPLLVICPSSVRHNWKDEILK- 187
Query: 239 LNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNF 298
N P L GS ++ S+ ++P G I++Y++ K + + NF
Sbjct: 188 -NNP----------LCGS----VNVILSSNDLSMPF-GDVTIVTYEIASKHAELFIKKNF 231
Query: 299 KIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYK 358
++++ DE H+LKN Q+KR LP++ ++ +LLSGT LSRP EL+ QL+AL ++
Sbjct: 232 QVIVVDECHYLKNPQSKRCRELLPVLLNSKRTVLLSGTALLSRPCELYPQLQALRFPIFD 291
Query: 359 NVHEYGNRYCKG--GVFG-IYQGASNHEELHNLMKATVMIRRLKKDVLAQ-LPVKRRQQV 414
+ H++ RYCK G FG Y G S+ ELH L+ VMIRRLK DVL +P K R V
Sbjct: 292 SFHKFAVRYCKARVGPFGWDYTGNSHLAELHVLLSNNVMIRRLKDDVLKDAIPEKERMTV 351
Query: 415 FLDVAEKDMRQIYALFRELEVVKGKIKA--CKSEEEVQSLKFTEKNLINKIYTDSAEAKI 472
+ + E++ +++ ++ E+ + K+ K +++ Q L+F Y S++AK+
Sbjct: 352 EIAIPEEEAQRMQSIRDAAELARRKVGGEFDKLQKQAQFLEF---------YVMSSKAKV 402
Query: 473 PAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
V ++E +I G KFL+FAHHQ MLDAI + K + IRIDG T P R V +F
Sbjct: 403 VGVCKFIEKMILEGTKFLVFAHHQEMLDAIEEFVKSKDIGYIRIDGATQPTVRSKYVDKF 462
Query: 533 QEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYY 592
Q+ ++K A+LS+ A G G+TL AA TV+FAEL WTPG L QAEDR HRIGQ + V ++Y
Sbjct: 463 QKNRNMKIAILSVTAAGTGITLHAADTVVFAELYWTPGILRQAEDRVHRIGQKNKVRIFY 522
Query: 593 LLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
L+ TVDD +W ++ KL G+ LDG E+
Sbjct: 523 LIGKKTVDDYIWPLLEKKLYITGEALDGKES 553
>gi|410906125|ref|XP_003966542.1| PREDICTED: DNA annealing helicase and endonuclease ZRANB3-like
[Takifugu rubripes]
Length = 1035
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 198/483 (40%), Positives = 289/483 (59%), Gaps = 29/483 (6%)
Query: 157 PDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDV 216
P ++ +P + +L+PFQR+GV FAL GR ++ADEMGLGKT+QAIAVA+ FR
Sbjct: 12 PRWSQQLSGLPHKLLQRLMPFQREGVEFALSKNGRCMIADEMGLGKTVQAIAVASAFRKE 71
Query: 217 WPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVV--LSQLGGSNRSGFTIVSSNTKRNIP 273
WP+L++ PSSL+ W +++W+ + P +I +V S G S T++
Sbjct: 72 WPLLVVVPSSLKYPWIEELERWIPELQPGDINLVENKSHTMGIGSSKVTVLG-------- 123
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
+ +++ D L L +F +V+ DESH+LK+ A RT +P+I A+ A+LL
Sbjct: 124 ----YGLLTTDA-RALIEALNRQHFAVVVVDESHYLKSRNAARTKILVPLIHSAKRAVLL 178
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG--GVFGI-----YQGASNHEELH 386
+GTPAL RP ELF Q++ALYP + +Y +YC FG +GASN +ELH
Sbjct: 179 TGTPALGRPEELFMQIDALYPKKFGTWSDYAKKYCNAHYKFFGPRRQWDCRGASNLDELH 238
Query: 387 NLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSE 446
+ + +MIRRLK +VL QLP K RQ++ D+ ++ ++ A F E E++ +K +S
Sbjct: 239 QRL-SQIMIRRLKAEVLTQLPPKVRQRIPFDLPKEAAKEASATFAEWEIL---MKGQRSG 294
Query: 447 EEVQSLKFTE-KNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQ 504
E FT+ L+ ++Y +A AK AV DY++ ++EA KFL+FAHH ML A +
Sbjct: 295 VETTENPFTQVMGLVTQMYKQTAVAKAGAVKDYIKMMLEAEKIKFLVFAHHLTMLQACTE 354
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
++ K IRIDG P + R LV +FQ + + AVLS++A G GLT TAAS V+FAE
Sbjct: 355 AVIEAKAGYIRIDGSVPSSERIQLVHKFQNDPETRVAVLSIQAAGQGLTFTAASHVVFAE 414
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 624
L W PG + QAEDRAHRIGQ SS+NV+YL+A T D ++W ++ K G L+G +
Sbjct: 415 LYWNPGHIKQAEDRAHRIGQTSSINVHYLIAKGTFDTVMWSMLNRKETVTGSTLNGRKEY 474
Query: 625 LEV 627
L+
Sbjct: 475 LKA 477
>gi|426221535|ref|XP_004004965.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1 [Ovis
aries]
Length = 937
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 228/611 (37%), Positives = 343/611 (56%), Gaps = 52/611 (8%)
Query: 58 APKGSLGDFSKEQVPKLSVKFF------LHTSGNIAAKFTYDPVLVSAFRKIPKATWNAK 111
+P S G +K +P F L + A Y L++ F+++ ++ K
Sbjct: 301 SPSTSSGIIAKTGLPAAPSLAFVKGQCVLISRARFEADIGYSEDLIALFKQMDSRKYDVK 360
Query: 112 ERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLVQRAIA------SASAAPDLRE-KY 163
R W+F L K++ + V+++ L + A A S S ++ E
Sbjct: 361 TRKWSF---LLEEYSKLMERVRCLPQVQLDPLPKTLTLAFAAQLQKTSLSPVAEIPEADL 417
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
++ + + S LLPFQR GV FA+ GR+LLAD+MGLGKTIQAI +A +R WP+L++
Sbjct: 418 SRVDSKLVSSLLPFQRAGVNFAVAQRGRLLLADDMGLGKTIQAICIAAYYRKEWPLLVVV 477
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSS+R W ++WL ++ P +I VV++ G +R DGL NI+S
Sbjct: 478 PSSVRFTWEQAFRRWLPSLNPVDINVVVT---GKDRL--------------TDGLVNIVS 520
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
+D++ KL+ L FK+VI DESHFLKN + R A +P++K A+ +LLSGTPA+SRP
Sbjct: 521 FDLLSKLEKQLKPP-FKVVIIDESHFLKNIKTARCRAAVPLLKVAKRVILLSGTPAMSRP 579
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVMIRRLK 399
EL+ Q+ A+ P + H +G RYC K +G Y G+SN EL L++ VM+RRLK
Sbjct: 580 AELYTQILAVKPTFFPQFHAFGLRYCGAKRQPWGWDYSGSSNLGELKLLLEEAVMLRRLK 639
Query: 400 KDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNL 459
DVL+QLP K+R+ V + + + R AL + + K K + ++E L F
Sbjct: 640 GDVLSQLPAKQRKMVVVAPGQINARTRAALDAAAKEMTTKDKTKQQQKEALILFFNR--- 696
Query: 460 INKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDG 518
+AEAKIP++++Y+ ++E+G KFL+FAHH+ +LDAI + +K+V IRIDG
Sbjct: 697 -------TAEAKIPSIIEYVLDLLESGREKFLVFAHHKVVLDAITKELERKRVQHIRIDG 749
Query: 519 GTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDR 578
T A R+ L +FQ AVLS+ A +GLT ++A V+F EL W PG L+QAEDR
Sbjct: 750 STSSADREDLCQQFQLSPGPAVAVLSITAANMGLTFSSADLVVFGELFWNPGVLMQAEDR 809
Query: 579 AHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ--IRSSP 636
HRIGQ+SSV+++YL+A T DD +W +++ K++ LG+ N E++ +
Sbjct: 810 VHRIGQLSSVSIHYLVARGTADDYLWPLIQEKIKVLGEAGLSETNFSEMTEATDYFYKDS 869
Query: 637 AKQKTLDSFLK 647
+QK D F K
Sbjct: 870 KQQKIYDLFQK 880
>gi|351695375|gb|EHA98293.1| Zinc finger Ran-binding domain-containing protein 3 [Heterocephalus
glaber]
Length = 1077
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 197/476 (41%), Positives = 292/476 (61%), Gaps = 29/476 (6%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
E+ D +P +++KLLPFQ++G+ FAL+ GR L+ADEMGLGKTIQAIA+A +R+ WP+L
Sbjct: 24 EQLDFLPEKLKAKLLPFQKEGIIFALRRDGRCLVADEMGLGKTIQAIAIAYFYREEWPLL 83
Query: 221 ILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
I+ PSSLR W I++W+ + P I V+ N++ +S+ +K + GL
Sbjct: 84 IVVPSSLRYPWIEEIEKWIPELEPEGINVI------QNKTDVGRIST-SKVTVLGYGLLT 136
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
+ ++ + L NFK+VI DESH++K+ A R+ LPI++KA+ A+LL+GTPAL
Sbjct: 137 TGAETLI----DALNYQNFKVVIVDESHYMKSRTATRSKILLPIVQKARRAVLLTGTPAL 192
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKAT 392
RP ELF Q+EAL+P + +Y RYC + FG +GASN ELH L+ +
Sbjct: 193 GRPEELFMQIEALFPQKFGTWTDYSKRYCNAHIRYFGKRPQWDCRGASNLNELHQLL-SD 251
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL 452
+MIRRLK +VL QLP K RQ++ D+ +++ F E E K+ + ++++
Sbjct: 252 IMIRRLKTEVLTQLPPKIRQRIPFDLPPSAAKELNNSFEEWE----KLMRAPNPGGIETV 307
Query: 453 KFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKV 511
LI I+ +A AK AV +Y++ +++ KFL+FAHH ML A + ++ K
Sbjct: 308 M----GLITHIFKQTAIAKAGAVKNYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKA 363
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
+RIDG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG
Sbjct: 364 RYVRIDGSVLSSERIHLVNQFQKNPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGH 423
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
+ QAEDRAHRIGQ SVN++YL+AN T+D +W ++ K + G L+G + L+
Sbjct: 424 IKQAEDRAHRIGQCCSVNIHYLIANGTLDTFMWGMLNRKTQVTGSTLNGRKEQLQA 479
>gi|66821527|ref|XP_644229.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
gi|60472422|gb|EAL70375.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
Length = 1400
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 189/479 (39%), Positives = 288/479 (60%), Gaps = 31/479 (6%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQH-GGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
+IP + S LLPFQ + F Q G+ L+ DEMGLGKTIQA+A+++ +R WP+LI+
Sbjct: 708 RIPVELFSTLLPFQMKSLSFCTQQLSGKCLIGDEMGLGKTIQALAISSYYRSEWPLLIIC 767
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
PSSLRL W+ +++W P +I V+++ G +++ + + NI SY
Sbjct: 768 PSSLRLSWSKEVEKWF--PSVDINVIMT---GEDKA---------------NAMVNICSY 807
Query: 284 DVVLKL-QNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
D+V +L + L+ FK +I DESH++KN++AKRT L ++ A+ +LL+GTPALSRP
Sbjct: 808 DLVGRLLEKELLPRAFKAIICDESHYMKNSEAKRTKNVLKLVHTAKIRILLTGTPALSRP 867
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLK 399
+ELF Q+ AL +Y ++++G RYC G++G Y G S+ +EL+ L++ VMIRRLK
Sbjct: 868 VELFPQMLALGASIYPTLNDFGLRYCNAFKGIYGWDYTGNSHLQELYVLIRG-VMIRRLK 926
Query: 400 KDVLAQLPVKRRQQVFLDV-----AEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKF 454
DVL LP K R +V +D + ++ +++ +L +++ K +
Sbjct: 927 NDVLKDLPPKVRIKVVVDTPTPKDVQNEVGSVFSKSNKLSMIQQFQKQPNANSIGGGGGG 986
Query: 455 TEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
+K+ I +Y ++ AK+ A DY+ +I+ KFL+FAHH +++ + + I
Sbjct: 987 GQKDKIMHLYVETGRAKLKASSDYIINLIKKNEKFLVFAHHADIMNGLEEAIKSTGAGYI 1046
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDG TP RQA VT+FQ K A+LS+ A G GLTLTA++ V+F EL WTPG L Q
Sbjct: 1047 RIDGSTPAVQRQAFVTKFQNNASCKVALLSITAAGTGLTLTASNLVVFVELYWTPGVLRQ 1106
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIR 633
AEDR HRIGQ + ++YL+ +T+DD +W + +KLE LG+ LDG E L + +R
Sbjct: 1107 AEDRIHRIGQTKTCYIHYLIGKNTLDDRIWPTICNKLEVLGETLDGQEEVLHTQNLDMR 1165
>gi|167539902|ref|XP_001741408.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165894110|gb|EDR22194.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 956
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 193/461 (41%), Positives = 278/461 (60%), Gaps = 27/461 (5%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTP 224
QI + KL PFQ GV F +QH GR L+ADEMGLGKT+QAI++A ++ WP+L++ P
Sbjct: 118 QIGEQLLFKLKPFQIQGVEFGIQHNGRCLIADEMGLGKTLQAISIAQYYKTDWPLLVICP 177
Query: 225 SSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
SSLR +W I N + VVV+ S+ N P G I+SY+
Sbjct: 178 SSLRANWKNEI--ITNCKCYDDVVVMF--------------SSKDLNKPW-GRVTIVSYE 220
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
+ K ++ FKIVIADE H+LKN+Q+KR LP++ A++ +LLSGT LSRP E
Sbjct: 221 IAAKHAQEILDKQFKIVIADECHYLKNSQSKRCRELLPVLINAEHTILLSGTALLSRPSE 280
Query: 345 LFKQLEALYPDVYKNVHEYGNRYCKGGV--FG-IYQGASNHEELHNLMKATVMIRRLKKD 401
L+ Q++AL ++ + H++G RYC V FG Y G S+ ELH L+ VMIRRLK++
Sbjct: 281 LYPQMQALRFPIFPSFHKFGVRYCNAKVTQFGWDYTGNSHLPELHILLSKFVMIRRLKEE 340
Query: 402 VLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLIN 461
VL++LP K R +V +D+ ++D+ ++ L E+ K K+ K E+ + ++F E
Sbjct: 341 VLSELPDKERMEVVIDIPQEDVIKMKDLRLAAELQKKKL-GDKVEKFTKQIQFVE----- 394
Query: 462 KIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
+Y + AK+ V +L+ +I G K L+F HHQ MLD I + + IRIDG T
Sbjct: 395 -LYNMTCTAKLKGVCSFLDKMIIEGKKLLVFGHHQEMLDGIENYIKESNIEYIRIDGSTN 453
Query: 522 PASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHR 581
+ R V FQ++ ++ A+LS+ A G G+TL +A TV+FAEL WTPG L QAEDR HR
Sbjct: 454 ASLRAKYVDRFQKEKRIRIAILSVTAAGTGITLHSADTVVFAELYWTPGVLRQAEDRVHR 513
Query: 582 IGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
IGQ + V ++YL+ TVDD++W ++ KL+ G+ LDG E
Sbjct: 514 IGQKNDVRIFYLIGKQTVDDLIWPLLEKKLKISGETLDGKE 554
>gi|403266927|ref|XP_003925609.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1
[Saimiri boliviensis boliviensis]
Length = 957
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 221/575 (38%), Positives = 328/575 (57%), Gaps = 47/575 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A Y L++ F+++ ++ K R W+F L K++++ V+++ L +
Sbjct: 349 ADIGYSQDLIAVFKQMDSRRYDVKTRKWSF---LLEEHNKLITKARCLPQVQLDPLPKTL 405
Query: 147 QRAIASA------SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS S PD+ E ++ + S L+PFQR GV FA+ GGR+LLAD+MG
Sbjct: 406 TLAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMG 465
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G +R
Sbjct: 466 LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLNPDCINVVVT---GKDR 522
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN++ R
Sbjct: 523 L--------------TAGLVNIVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNSRTARCR 567
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA SRP EL+ Q+ A+ P + H +G RYC K +G
Sbjct: 568 AAMPVLKVAKRVILLSGTPATSRPAELYTQIIAVRPTFFPQFHAFGLRYCDAKRMPWGWD 627
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V + A R
Sbjct: 628 YSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIV-----------VVAPGRISAT 676
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
+ + A E K +K + + +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 677 ARAALNAAAKEMTKDKTKQQQKEALILFFNRTAEAKIPSVIEYIMDLLESGKEKFLVFAH 736
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +LDA+ + +K V IRIDG T A R+ L +FQ AVLS+ A +GLT
Sbjct: 737 HKVVLDAVTKALERKHVLHIRIDGSTSSAEREDLCQQFQLSPRHAVAVLSITAANMGLTF 796
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
++A V+FAEL W PG LIQAEDR HRIGQ SSV ++Y++A T DD +W +++ K++ L
Sbjct: 797 SSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYVVAKGTADDYLWPMIQEKIKVL 856
Query: 615 GQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
G+ N E++ + + P +Q+ D F K
Sbjct: 857 GEAGLSETNFSEMTEATDYLYKDPKQQQIYDLFQK 891
>gi|229577278|ref|NP_061287.2| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Mus musculus]
gi|60390942|sp|Q8BJL0.1|SMAL1_MOUSE RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1;
AltName: Full=HepA-related protein; Short=mharp;
AltName: Full=Sucrose nonfermenting protein 2-like 1
gi|26350593|dbj|BAC38933.1| unnamed protein product [Mus musculus]
gi|148667869|gb|EDL00286.1| Swi/SNF related matrix associated, actin dependent regulator of
chromatin, subfamily a-like 1, isoform CRA_c [Mus
musculus]
Length = 910
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 215/567 (37%), Positives = 321/567 (56%), Gaps = 50/567 (8%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLVQRAI 150
Y ++ F+++ +++ K R W+F L K+++ V+++ L V A
Sbjct: 308 YSEAVIGLFKQMESRSYDIKTRKWSF---LLEEHNKLIARSRELKQVQLDPLPKTVTLAF 364
Query: 151 AS--ASAAPDLREKYDQ-----IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKT 203
AS +P L+ + + A + S L+PFQR+GV FA+ GR+LLAD+MGLGKT
Sbjct: 365 ASQLEKTSPKLKADVPEADLSGVDAKLVSSLMPFQREGVSFAISKRGRLLLADDMGLGKT 424
Query: 204 IQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFT 262
+QAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G
Sbjct: 425 VQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPENINVVVTGKGRLTA---- 480
Query: 263 IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLP 322
GL NI+S+D++ KL+ L + FK+VI DESHFLKN + R A +P
Sbjct: 481 -------------GLVNIVSFDLLCKLERQLKTP-FKVVIIDESHFLKNIKTARCRAAVP 526
Query: 323 IIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI---YQGA 379
I+K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC Y G+
Sbjct: 527 ILKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRLPWGWDYSGS 586
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL-EVVKG 438
SN EL L++ +M+RRLK DVL+QLP K+R+ V ++ R AL E+ K
Sbjct: 587 SNLGELKLLLEEAIMLRRLKSDVLSQLPAKQRKMVVVNPGRISSRAKAALDAAAKEMTKD 646
Query: 439 KIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQP 497
K K +K + + +AEAKIP V++Y+ ++++G KFL+FAHH+
Sbjct: 647 KTKQ------------QQKEALLVFFNRTAEAKIPCVVEYILDLLDSGREKFLVFAHHKV 694
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
+LDA+ + +K V IRIDG TP A R+A FQ A+LS+ A +GLT + A
Sbjct: 695 ILDAVAKELERKNVQHIRIDGSTPSADREAQCQRFQLSKGHTVALLSITAANMGLTFSTA 754
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
V+FAEL W PG LIQAEDR HRIGQ +SV+++YL+A T DD +W +++ K++ LG+
Sbjct: 755 DLVVFAELFWNPGVLIQAEDRVHRIGQTNSVSIHYLVAKGTADDYLWPLIQEKIKVLGEA 814
Query: 618 LDGHENSLEVSSSQ--IRSSPAKQKTL 642
N E++ + + P KQKT+
Sbjct: 815 GLSETNFSEMTEATDYVHKDP-KQKTI 840
>gi|20809351|gb|AAH29078.1| Smarcal1 protein [Mus musculus]
Length = 910
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 215/567 (37%), Positives = 321/567 (56%), Gaps = 50/567 (8%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLVQRAI 150
Y ++ F+++ +++ K R W+F L K+++ V+++ L V A
Sbjct: 308 YSEAVIGLFKQMESRSYDIKTRKWSF---LLEEHNKLIARSRELKQVQLDPLPKTVTLAF 364
Query: 151 AS--ASAAPDLREKYDQ-----IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKT 203
AS +P L+ + + A + S L+PFQR+GV FA+ GR+LLAD+MGLGKT
Sbjct: 365 ASQLEKTSPKLKADVPEADLSGVDAKLVSSLMPFQREGVSFAISKRGRLLLADDMGLGKT 424
Query: 204 IQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFT 262
+QAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G
Sbjct: 425 VQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPENINVVVTGKGRLTA---- 480
Query: 263 IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLP 322
GL NI+S+D++ KL+ L + FK+VI DESHFLKN + R A +P
Sbjct: 481 -------------GLVNIVSFDLLCKLERQLKTP-FKVVIIDESHFLKNIKTARCRAAVP 526
Query: 323 IIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI---YQGA 379
I+K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC Y G+
Sbjct: 527 ILKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRLPWGWDYSGS 586
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL-EVVKG 438
SN EL L++ +M+RRLK DVL+QLP K+R+ V ++ R AL E+ K
Sbjct: 587 SNLGELKLLLEEAIMLRRLKSDVLSQLPAKQRKMVVVNPGRISSRAKAALDAAAKEMTKD 646
Query: 439 KIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQP 497
K K +K + + +AEAKIP V++Y+ ++++G KFL+FAHH+
Sbjct: 647 KTKQ------------QQKEALLVFFNRTAEAKIPCVVEYILDLLDSGREKFLVFAHHKV 694
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
+LDA+ + +K V IRIDG TP A R+A FQ A+LS+ A +GLT + A
Sbjct: 695 ILDAVAKELERKNVQHIRIDGSTPSADREAQCQRFQLSKGHTVALLSITAANMGLTFSTA 754
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
V+FAEL W PG LIQAEDR HRIGQ +SV+++YL+A T DD +W +++ K++ LG+
Sbjct: 755 DLVVFAELFWNPGVLIQAEDRVHRIGQTNSVSIHYLVAKGTADDYLWPLIQEKIKVLGEA 814
Query: 618 LDGHENSLEVSSSQ--IRSSPAKQKTL 642
N E++ + + P KQKT+
Sbjct: 815 GLSETNFSEMTEATDYVHKDP-KQKTI 840
>gi|183233301|ref|XP_654593.2| helicase [Entamoeba histolytica HM-1:IMSS]
gi|169801642|gb|EAL49206.2| helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449702489|gb|EMD43120.1| helicase, putative [Entamoeba histolytica KU27]
Length = 956
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 194/479 (40%), Positives = 282/479 (58%), Gaps = 27/479 (5%)
Query: 147 QRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQA 206
Q I +P +I + KL PFQ GV F ++H GR L+ADEMGLGKT+QA
Sbjct: 100 QDEIEGIDTSPQEVVDMSRIGEQLLFKLKPFQVQGVEFGIRHNGRCLIADEMGLGKTLQA 159
Query: 207 IAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSS 266
I++A ++ WP+L++ PSSLR +W I N + VVV+ S
Sbjct: 160 ISIAQYYKTDWPLLVICPSSLRTNWKNEI--VTNCKCYDDVVVMF--------------S 203
Query: 267 NTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKK 326
+ N P G I+SY++ K ++ FKIVIADE H+LKN+Q+KR LP++
Sbjct: 204 SKDLNKPW-GKVTIVSYEIAAKHAQEILDKQFKIVIADECHYLKNSQSKRCRELLPVLVN 262
Query: 327 AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FG-IYQGASNHE 383
A++ +LLSGT LSRP EL+ Q++AL ++ + H +G RYC V FG Y G S+
Sbjct: 263 AEHTILLSGTALLSRPSELYPQMQALRFPIFSSFHNFGIRYCNAKVTQFGWDYTGNSHLP 322
Query: 384 ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC 443
ELH L+ VMIRRLK++VL++LP K R +V +D++++D+ ++ L E+ K K+
Sbjct: 323 ELHILLSKFVMIRRLKEEVLSELPDKERMEVVIDISQEDIIKMKDLRLAAEIQKKKL-GD 381
Query: 444 KSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
K E+ + ++F E +Y + AK+ V +L+ +I G K L+F HHQ MLD I
Sbjct: 382 KVEKFTKQIQFVE------LYNMTCTAKLKGVCSFLDKMIIEGKKLLVFGHHQEMLDGIE 435
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
+ + IRIDG T + R V FQ++ ++ A+LS+ A G G+TL +A TV+FA
Sbjct: 436 TYIKENNIEYIRIDGSTNASLRAKYVDRFQKEKRIRIAILSVTAAGTGITLHSADTVVFA 495
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
EL WTPG L QAEDR HRIGQ + V ++YL+ TVDD++W ++ KL+ G+ LDG E
Sbjct: 496 ELYWTPGVLRQAEDRVHRIGQKNDVRIFYLIGKQTVDDLIWPLLEKKLKISGETLDGKE 554
>gi|148667867|gb|EDL00284.1| Swi/SNF related matrix associated, actin dependent regulator of
chromatin, subfamily a-like 1, isoform CRA_a [Mus
musculus]
Length = 922
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 215/567 (37%), Positives = 321/567 (56%), Gaps = 50/567 (8%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLVQRAI 150
Y ++ F+++ +++ K R W+F L K+++ V+++ L V A
Sbjct: 320 YSEAVIGLFKQMESRSYDIKTRKWSF---LLEEHNKLIARSRELKQVQLDPLPKTVTLAF 376
Query: 151 AS--ASAAPDLREKYDQ-----IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKT 203
AS +P L+ + + A + S L+PFQR+GV FA+ GR+LLAD+MGLGKT
Sbjct: 377 ASQLEKTSPKLKADVPEADLSGVDAKLVSSLMPFQREGVSFAISKRGRLLLADDMGLGKT 436
Query: 204 IQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFT 262
+QAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G
Sbjct: 437 VQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPENINVVVTGKGRLTA---- 492
Query: 263 IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLP 322
GL NI+S+D++ KL+ L + FK+VI DESHFLKN + R A +P
Sbjct: 493 -------------GLVNIVSFDLLCKLERQLKTP-FKVVIIDESHFLKNIKTARCRAAVP 538
Query: 323 IIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI---YQGA 379
I+K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC Y G+
Sbjct: 539 ILKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRLPWGWDYSGS 598
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL-EVVKG 438
SN EL L++ +M+RRLK DVL+QLP K+R+ V ++ R AL E+ K
Sbjct: 599 SNLGELKLLLEEAIMLRRLKSDVLSQLPAKQRKMVVVNPGRISSRAKAALDAAAKEMTKD 658
Query: 439 KIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQP 497
K K +K + + +AEAKIP V++Y+ ++++G KFL+FAHH+
Sbjct: 659 KTKQ------------QQKEALLVFFNRTAEAKIPCVVEYILDLLDSGREKFLVFAHHKV 706
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
+LDA+ + +K V IRIDG TP A R+A FQ A+LS+ A +GLT + A
Sbjct: 707 ILDAVAKELERKNVQHIRIDGSTPSADREAQCQRFQLSKGHTVALLSITAANMGLTFSTA 766
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
V+FAEL W PG LIQAEDR HRIGQ +SV+++YL+A T DD +W +++ K++ LG+
Sbjct: 767 DLVVFAELFWNPGVLIQAEDRVHRIGQTNSVSIHYLVAKGTADDYLWPLIQEKIKVLGEA 826
Query: 618 LDGHENSLEVSSSQ--IRSSPAKQKTL 642
N E++ + + P KQKT+
Sbjct: 827 GLSETNFSEMTEATDYVHKDP-KQKTI 852
>gi|389584478|dbj|GAB67210.1| helicase [Plasmodium cynomolgi strain B]
Length = 917
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/510 (37%), Positives = 302/510 (59%), Gaps = 46/510 (9%)
Query: 146 VQRAIASASAAPDLREKYDQ----IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLG 201
+ +I + + P ++ YD+ + + ++L FQR+GV F L+ GR+L+ DEMGLG
Sbjct: 323 ITASILTNTLCPYTKKNYDKMDILVGEKLSAELKNFQREGVYFGLKKNGRVLIGDEMGLG 382
Query: 202 KTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
KT+QA+A+ +++ WP +++ PSS+R W +WL+ SE + + + G
Sbjct: 383 KTLQALALMAFYQEDWPFIVVCPSSIRFQWKDQALRWLSHLLSEDQICVVKSG------- 435
Query: 262 TIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATL 321
K +IP + IISY+++ K N + +K ++ DESH+LKN+ +KRT A
Sbjct: 436 -------KTDIPRNCKMIIISYELITK--NDKYQNKYKSIVCDESHYLKNSFSKRTKAIT 486
Query: 322 PIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI---Y 376
PII+ A+ +LLSGTPAL++P EL++Q+ ++ P+++ N HE+ +RYC ++ Y
Sbjct: 487 PIIRSAKRCVLLSGTPALNKPSELYEQVSSIIPNLF-NYHEFCDRYCFKDKNIYTRKIEY 545
Query: 377 QGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVV 436
G + EELH + T+MIRRLKKDVL +LP K R ++ +++ K++ +I R+LE
Sbjct: 546 VGCKHTEELHLFLTNTIMIRRLKKDVLKELPEKLRSKIPVEIPPKELSEILTYHRKLESQ 605
Query: 437 KGKIKACKSEEEV------------QSL-----KFTEKNL-INKIYTDSAEAKIPAVLDY 478
K I + E+ QS K E N+ I+ ++ + AK+ A+ +Y
Sbjct: 606 KN-INLSEDMNELPLSGGGNEYGYGQSTSGIPNKGDEDNVSISHLFKMTGYAKVKAIKEY 664
Query: 479 LETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDV 538
+ +I+A KFL+F HH+ ++D I +KK IR+DG TP R+ + FQ D V
Sbjct: 665 ITYLIDADIKFLLFCHHRLVMDEIDDFLTEKKTMFIRVDGLTPIEKREVYIKSFQNDDQV 724
Query: 539 KAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSS-VNVYYLLAND 597
K A+LS+ A G+GL LTAA+TV+F EL W PG +IQAEDRAHRIG VN++YL+A +
Sbjct: 725 KIALLSLTACGIGLNLTAANTVVFGELYWVPGQIIQAEDRAHRIGTTHEVVNIHYLIAQN 784
Query: 598 TVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
T+D+IVW ++ K L L+G E+SL V
Sbjct: 785 TIDEIVWKIINRKWNTLTTALNGMEDSLNV 814
>gi|124513860|ref|XP_001350286.1| DNA helicase, putative [Plasmodium falciparum 3D7]
gi|23615703|emb|CAD52695.1| DNA helicase, putative [Plasmodium falciparum 3D7]
Length = 906
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/503 (38%), Positives = 298/503 (59%), Gaps = 50/503 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIESKL----LPFQRDGVRFALQHGGRILLADEMGLGKTIQ 205
I + + ++ YD++ + KL FQR+GV F L+ GR+L+ DEMGLGKT+Q
Sbjct: 325 ILTNTMCSYTKQHYDKLDHLLGEKLSVELRNFQREGVFFGLKKNGRVLIGDEMGLGKTLQ 384
Query: 206 AIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLN--IPPSEIVVVLSQLGGSNRSGFTI 263
A+A+ ++D WP +++ PSS+R W +WL+ I I VV ++G T
Sbjct: 385 ALALMAFYKDDWPFIVVCPSSIRFQWKDQALRWLSHLIREEHICVV--------KNGKTD 436
Query: 264 VSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPI 323
+ SNTK IISY+++ K N +K +I DESH+LKN+ +KRT PI
Sbjct: 437 IPSNTK--------MIIISYELITK--NDKYQDKYKSIICDESHYLKNSLSKRTKVITPI 486
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI---YQG 378
IK A+ +LLSGTPAL++P EL++Q+ ++ P+ + N HE+ +RYC ++ Y G
Sbjct: 487 IKNAKRCVLLSGTPALNKPSELYEQISSIMPNFF-NYHEFCDRYCFKDKNLYTKKIEYVG 545
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKG 438
+ EELH + T+MIRRLKKDVL +LP K R ++ +++ +K++ +I +++LE K
Sbjct: 546 CKHTEELHLFLTNTIMIRRLKKDVLKELPDKLRSKIPVEIPQKELSEILNYYKKLESKKN 605
Query: 439 ------------KIKACKSEEEVQSLKFTEKNL-INKIYTDSAEAKIPAVLDYLETVIEA 485
KSE+ ++NL I+ ++ + AK+ A+ +Y+ +I+A
Sbjct: 606 INFHDIDNIHLSNWSNSKSEDG------DDENLSISHLFKITGYAKVKAIKEYISYLIDA 659
Query: 486 GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSM 545
KFL+F HH+ ++D + ++K IR+DG TP R+ + FQ D+VK A+LS+
Sbjct: 660 DIKFLLFCHHKLVMDEVETFLKEQKCSYIRVDGLTPMEKREIYIKNFQNDDNVKIALLSI 719
Query: 546 KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSS-VNVYYLLANDTVDDIVW 604
A G+GL LTAA+TV+F EL W PG +IQAEDRAHRIG VN++YL+A +T+D+IVW
Sbjct: 720 TACGMGLNLTAANTVVFGELFWVPGQIIQAEDRAHRIGTAHDVVNIHYLIAQNTIDEIVW 779
Query: 605 DVVRSKLENLGQVLDGHENSLEV 627
++ K L L+G E+SL V
Sbjct: 780 KIINRKWNTLTTALNGIEDSLNV 802
>gi|149710126|ref|XP_001490055.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily a-like 1 [Equus
caballus]
Length = 948
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 222/577 (38%), Positives = 324/577 (56%), Gaps = 47/577 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A Y L++ F+++ ++ + + W F L K++ + V ++ L +
Sbjct: 343 ADIGYSEDLIALFKQMDSRNYDVQTKKWNF---LLEEHSKLIERVRCLPQVRLDPLPTTL 399
Query: 147 QRAIASASAAPDLREKYDQIPAHIE-------SKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS LR D A + S LLPFQR GV FA+ GGR+LLAD+MG
Sbjct: 400 LLAFASQLEQTSLRPAADIPEADLSGVDPKLVSNLLPFQRAGVNFAVAKGGRLLLADDMG 459
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI VA +R WP+L++ PSS+R W QWL ++ P I VV+
Sbjct: 460 LGKTIQAICVAAFYRKEWPLLVVVPSSVRFTWEQAFLQWLPSLSPDHINVVV-------- 511
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNIL--MSSNFKIVIADESHFLKNAQAKR 316
T ++ GL NI+S+D++ KL+ L + S FK+VI DESHFLKN++ R
Sbjct: 512 ---------TGKDHLTAGLVNIVSFDLLSKLEKQLKQLKSPFKVVIIDESHFLKNSKTAR 562
Query: 317 TAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFG 374
A P++K A +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G
Sbjct: 563 CRAATPLLKVANRVILLSGTPAMSRPAELYTQILAVKPTFFPQFHAFGLRYCDAKRMPWG 622
Query: 375 I-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL 433
Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V + + + +L
Sbjct: 623 WDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKMVVVAPGRINAKARASLDAAA 682
Query: 434 EVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIF 492
+ + K K + ++E L F +AEAKIP V++Y+ ++E+G KFL+F
Sbjct: 683 KEMTTKNKTKQQQKEALILFFNR----------TAEAKIPCVIEYILDLLESGREKFLVF 732
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGL 552
AHH+ +LDAI + +K V IRIDG T A R+AL +FQ + AVLS+ A +GL
Sbjct: 733 AHHKVVLDAITKELERKHVQHIRIDGATSSADREALCQQFQLSERHAVAVLSITAANMGL 792
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
T ++A V+FAEL W PG LIQAEDR HRIGQ SV ++YL+A T DD +W +++ K++
Sbjct: 793 TFSSADLVVFAELFWNPGVLIQAEDRVHRIGQSRSVGIHYLVARGTADDYLWPLIQEKIK 852
Query: 613 NLGQ--VLDGHENSLEVSSSQIRSSPAKQKTLDSFLK 647
L + + + + + ++ + P +QK D F K
Sbjct: 853 ILSEAGLSETKFSEMTEATDYLYKDPKQQKIYDLFQK 889
>gi|403362793|gb|EJY81131.1| SNF2 family N-terminal domain containing protein [Oxytricha
trifallax]
Length = 1116
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 210/580 (36%), Positives = 311/580 (53%), Gaps = 69/580 (11%)
Query: 86 IAAKFT--YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEIS----GYNVEI 139
IA KF YDP + + +P A ++A+ R W ++VL EI ++I
Sbjct: 241 IALKFENFYDPDIKDKIKALPDARYDAQSREWFVRKDMY---DRVLEEIGQLCITRGIQI 297
Query: 140 ENL----HPLVQRAIASASAAPDLRE-------------KYDQIPAHIESKLLPFQRDGV 182
++ + L + +I L+ K + +P I L FQ+ G+
Sbjct: 298 ADIPEFAYELAKNSIPFTVGNKKLKSLGLNYEPEVRLKLKVESLPPKILENLYEFQKKGI 357
Query: 183 RFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIP 242
F GR+LL DEMG+GKTIQAI ++ ++ WP+ I+ PSSLR W I +W IP
Sbjct: 358 EFGFSRFGRLLLGDEMGVGKTIQAIGISYGYKQDWPLFIVAPSSLRYTWKDEIMKW--IP 415
Query: 243 P-SEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
E + + + G S D I+SYD+ K + + FKI
Sbjct: 416 TIKEKDIQMFKKGTDQWSP--------------DACIFIMSYDLAQKRHEEIDAKKFKIC 461
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
IADE+H+LK+ +KR+ +PI+ KA+ +L+SGTP LSRP E++ ++ L PD+ +
Sbjct: 462 IADEAHYLKSRDSKRSKHLMPILTKAKRVILISGTPMLSRPYEIYNLMKILRPDIVGSFT 521
Query: 362 EYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDV 418
EY RYC K +G+ Y G S +ELH ++ +VMIRRLKK+VL QLP KRRQ++ +
Sbjct: 522 EYSARYCNPKETPYGMDYTGNSCTKELHYILSQSVMIRRLKKEVLDQLPPKRRQKIQVQT 581
Query: 419 AEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL------------------KFTEKNLI 460
K + Q+ + L+ +G + E+ VQ+L K + N
Sbjct: 582 DAKLVTQVKKILNNLKNDEGDV-----EKFVQTLITDNTSFSEYLSGQRANNKEQDDNSF 636
Query: 461 NKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
Y + E+KI + D+++T+I+ CKF++FAHHQ ++D I + K KV IRIDG T
Sbjct: 637 MSAYRLTGESKIDGITDFMDTLIQNSCKFIVFAHHQVVMDGIEEFVKKTKVGYIRIDGKT 696
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
R VT+FQ DD K A+LS+ A GLTLTAAST++FAE+ WTP + QAEDRAH
Sbjct: 697 NVDHRHDRVTKFQNDDDTKIAILSITACSQGLTLTAASTIVFAEMFWTPSIMTQAEDRAH 756
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
RI Q + VN+YYL DTVD++++ ++ K + + LDG
Sbjct: 757 RISQQNCVNIYYLHGPDTVDEMLFQMLAEKSQVVSDALDG 796
>gi|74150596|dbj|BAE32320.1| unnamed protein product [Mus musculus]
Length = 910
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 214/567 (37%), Positives = 320/567 (56%), Gaps = 50/567 (8%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLVQRAI 150
Y ++ F+++ +++ K R W+F L K+++ V+++ L V A
Sbjct: 308 YSEAVIGLFKQMESRSYDIKTRKWSF---LLEEHNKLIARSRELKQVQLDPLPKTVTLAF 364
Query: 151 AS--ASAAPDLREKYDQ-----IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKT 203
AS +P L+ + + A + S L+PFQR+GV FA+ GR+LLAD+MGLGKT
Sbjct: 365 ASQLEKTSPKLKADVPEADLSGVDAKLVSSLMPFQREGVSFAISKRGRLLLADDMGLGKT 424
Query: 204 IQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFT 262
+QAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G
Sbjct: 425 VQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPENINVVVTGKGRLTA---- 480
Query: 263 IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLP 322
GL NI+S+D++ KL+ L + FK+VI DESHFLKN + R A +P
Sbjct: 481 -------------GLVNIVSFDLLCKLERQLKTP-FKVVIIDESHFLKNIKTARCRAAVP 526
Query: 323 IIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI---YQGA 379
I+ A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC Y G+
Sbjct: 527 ILNVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRLPWGWDYSGS 586
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL-EVVKG 438
SN EL L++ +M+RRLK DVL+QLP K+R+ V ++ R AL E+ K
Sbjct: 587 SNLGELKLLLEEAIMLRRLKSDVLSQLPAKQRKMVVVNPGRISSRAKAALDAAAKEMTKD 646
Query: 439 KIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQP 497
K K +K + + +AEAKIP V++Y+ ++++G KFL+FAHH+
Sbjct: 647 KTKQ------------QQKEALLVFFNRTAEAKIPCVVEYILDLLDSGREKFLVFAHHKV 694
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
+LDA+ + +K V IRIDG TP A R+A FQ A+LS+ A +GLT + A
Sbjct: 695 ILDAVAKELERKNVQHIRIDGSTPSADREAQCQRFQLSKGHTVALLSITAANMGLTFSTA 754
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
V+FAEL W PG LIQAEDR HRIGQ +SV+++YL+A T DD +W +++ K++ LG+
Sbjct: 755 DLVVFAELFWNPGVLIQAEDRVHRIGQTNSVSIHYLVAKGTADDYLWPLIQEKIKVLGEA 814
Query: 618 LDGHENSLEVSSSQ--IRSSPAKQKTL 642
N E++ + + P KQKT+
Sbjct: 815 GLSETNFSEMTEATDYVHKDP-KQKTI 840
>gi|391333537|ref|XP_003741169.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Metaseiulus occidentalis]
Length = 647
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/559 (36%), Positives = 311/559 (55%), Gaps = 45/559 (8%)
Query: 68 KEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPV----PFLS 123
K++ K + FL + + ++ L+ F+ PK + R + F + L+
Sbjct: 95 KKEAAKTTGMCFLLSGEEFRLQCGFNQALIDLFKSHPKGRLDPTTRNYVFKLECHESLLN 154
Query: 124 SAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVR 183
+A+KV E++ I L + + + S PD + I + L+PFQ +GV
Sbjct: 155 AAKKVAPEVT-----ITGLPLFISKMLRSNIKQPDSQVDLRSIDPKLRKALMPFQTEGVV 209
Query: 184 FALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIP 242
+ G+IL+AD+MGLGKT+Q++A+A+ +R+ WP+LI+ PSS+R +W I QWL ++
Sbjct: 210 RGISQNGKILIADDMGLGKTVQSLAIASYYREEWPLLIVCPSSMRFNWRQAIVQWLPSLT 269
Query: 243 PSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDG-LFNIISYDVVLKLQNILMSSNFKIV 301
+I V++ K N PL I SY+++ + L+ NFK++
Sbjct: 270 EDDIQVIV------------------KTNEPLGANQVVITSYEMMGRRSEDLLGGNFKVL 311
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
I DESHFLKN +++RT + +++ +LLSGTPALSRP+EL+ Q+ L +++
Sbjct: 312 IFDESHFLKNYKSQRTKVAQELSAESRRIILLSGTPALSRPVELYPQIRCLALKHLPSIY 371
Query: 362 EYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDV 418
++ RYC FG+ G+SN EELH L+KA +MIRRLK +VL QLP K+R + LD
Sbjct: 372 DFAARYCNARETRFGLDMSGSSNLEELHILLKAIIMIRRLKSEVLDQLPAKQRNVLILDP 431
Query: 419 AEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEK-NLINKIYTDSAEAKIPAVLD 477
D + A L + K +SL +EK + + + ++E K AV
Sbjct: 432 TLVDAKDAQADNYSLLLQK------------ESLTDSEKRSALMSYFRLTSEMKRKAVCK 479
Query: 478 YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD 537
Y+E ++E+ CKFL+FAHHQ +L+A+ ++ KKKV IRIDG +RQ L EFQ D
Sbjct: 480 YIEELLESDCKFLVFAHHQYLLNALAEVLTKKKVKYIRIDGKVSSEARQTLCEEFQTSDA 539
Query: 538 VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAND 597
+ A+LS+ A G+TL AAS V+FAEL W PG L QAEDR HRIGQ + V YL+A
Sbjct: 540 CRVALLSITAANAGITLHAASLVVFAELFWNPGILTQAEDRVHRIGQTQTCLVTYLIARG 599
Query: 598 TVDDIVWDVVRSKLENLGQ 616
T DD +W ++ KL L +
Sbjct: 600 TADDFIWPIIEGKLSVLNR 618
>gi|407036763|gb|EKE38321.1| helicase, putative [Entamoeba nuttalli P19]
Length = 956
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 193/479 (40%), Positives = 281/479 (58%), Gaps = 27/479 (5%)
Query: 147 QRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQA 206
Q I +P +I + KL PFQ GV F ++H GR L+ADEMGLGKT+QA
Sbjct: 100 QDEIEGIDTSPQEVVDMSRIGEQLLFKLKPFQIQGVEFGIRHNGRCLIADEMGLGKTLQA 159
Query: 207 IAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSS 266
I++A ++ WP+L++ PSSLR +W I N + VVV+ S
Sbjct: 160 ISIAQYYKTDWPLLVICPSSLRTNWKNEI--MTNCKCYDDVVVMF--------------S 203
Query: 267 NTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKK 326
+ N P G I+SY++ K ++ FKIVIADE H+LKN+Q+KR LP++
Sbjct: 204 SKDLNKPW-GRVTIVSYEIAAKHSQEILDKQFKIVIADECHYLKNSQSKRCRELLPVLVN 262
Query: 327 AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FG-IYQGASNHE 383
A++ +LLSGT LSRP EL+ Q++AL ++ + H +G RYC V FG Y G S+
Sbjct: 263 AEHTILLSGTALLSRPSELYPQMQALRFPIFSSFHNFGIRYCNAKVTQFGWDYTGNSHLP 322
Query: 384 ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC 443
ELH L+ VMIRRLK++VL++LP K R +V ++++++D+ ++ L E+ K K+
Sbjct: 323 ELHILLSKFVMIRRLKEEVLSELPDKERMEVVIEISQEDIIKMKDLRLAAEIQKKKL-GD 381
Query: 444 KSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
K E+ + ++F E +Y + AK+ V +L+ +I G K L+F HHQ MLD I
Sbjct: 382 KVEKFTKQIQFVE------LYNMTCTAKLKGVCSFLDKMIIEGKKLLVFGHHQEMLDGIE 435
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
+ + IRIDG T R V FQ++ ++ A+LS+ A G G+TL +A TV+FA
Sbjct: 436 TYIKENNIEYIRIDGSTNAPLRAKYVDRFQKEKRIRIAILSVTAAGTGITLHSADTVVFA 495
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
EL WTPG L QAEDR HRIGQ + V ++YL+ TVDD++W ++ KL+ G+ LDG E
Sbjct: 496 ELYWTPGVLRQAEDRVHRIGQKNDVRIFYLIGKQTVDDLIWPLLEKKLKISGETLDGKE 554
>gi|126337900|ref|XP_001367889.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily a-like 1 [Monodelphis
domestica]
Length = 965
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 211/583 (36%), Positives = 323/583 (55%), Gaps = 45/583 (7%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A + +++ F+++ ++ K R W F L ++++ EI + +E L V
Sbjct: 363 ADIGFSEDVIALFKQMGSRNYDMKTRKWNF---HLKDHKRLMEEIHRLPGIHLEPLPKAV 419
Query: 147 QRAIA-----SASAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGL 200
+A A ++S + ++ E + + S L+PFQR GV FA+ GGR+LLAD+MGL
Sbjct: 420 VQAFAGYLAKTSSHSEEIPEADLSAVDPKLVSSLMPFQRIGVNFAISKGGRLLLADDMGL 479
Query: 201 GKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRS 259
GKTIQAI +A +R WP+L++TPS++R W +WL ++ P VV+
Sbjct: 480 GKTIQAICIAAYYRTEWPLLVVTPSTVRYTWEQAFHRWLPSLSPDSTNVVV--------- 530
Query: 260 GFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
T ++ GL NI+S+D++ K+ L +S F+++I DESHFLKN + R A
Sbjct: 531 --------TGKDSLTAGLINIVSFDLLSKMNKKLQTS-FQVIIIDESHFLKNIKTARCRA 581
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI---Y 376
+P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P ++ H++ RYC Y
Sbjct: 582 AMPLLKAAKRVILLSGTPAMSRPAELYTQIVAVKPFFFRQFHDFALRYCDAKKLPWGWDY 641
Query: 377 QGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVV 436
G+SN EL L++ +VM+RRLK DVL+QLP K+R+ V + + + + +L
Sbjct: 642 SGSSNLGELKLLLEESVMLRRLKSDVLSQLPAKQRKMVVVALGQMSAKTRASL------- 694
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHH 495
A K ++ + +K + + +AEAKI DY+ ++E+G K L+FAHH
Sbjct: 695 ---AAAAKEMATEKTSRRQQKEALLLFFHRTAEAKIQPATDYILDLLESGREKLLVFAHH 751
Query: 496 QPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLT 555
+ +LDA+ KK + IRIDG T + RQ L +FQ + AVLS+ A +GLT +
Sbjct: 752 KLVLDALSDELEKKHIGYIRIDGATSSSDRQTLCQQFQLSEKCAVAVLSITAANMGLTFS 811
Query: 556 AASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLG 615
A V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ LG
Sbjct: 812 ATDLVVFAELFWNPGVLIQAEDRVHRIGQTSSVTIHYLVARGTADDYLWPLIQEKIKVLG 871
Query: 616 QVLDGHENSLEVS--SSQIRSSPAKQKTLDSFLKRCNNVDDSE 656
Q N E++ S P ++K D F D E
Sbjct: 872 QAGLSETNFSELTEASDYFHKDPKQKKIYDLFRTSFEEDADGE 914
>gi|403335006|gb|EJY66674.1| SNF2 family N-terminal domain containing protein [Oxytricha
trifallax]
Length = 1221
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 189/495 (38%), Positives = 287/495 (57%), Gaps = 48/495 (9%)
Query: 158 DLREKYDQ------IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVAT 211
D E +D +P + ++L FQR GV+F + H GR L+ DEMG+GKTIQAI+++
Sbjct: 247 DYHEDFDHKANIQNLPKSLYAQLYHFQRVGVQFGIDHHGRCLIGDEMGVGKTIQAISISY 306
Query: 212 CFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRN 271
++ WP+LI+TPSSLR W + WL E + VL+ S++ F+
Sbjct: 307 LYKKDWPLLIITPSSLRFTWRDELMNWLGFIKEEDIQVLT----SSQDCFSSTCQ----- 357
Query: 272 IPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
IISY++ +L ++ F + I DE+H+LK+ +KR +P++ K + L
Sbjct: 358 ------IYIISYNIATRLAGLIDRKKFGMTIVDEAHYLKSRDSKRARNLVPVLMKMKRIL 411
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNL 388
LLSGTP L+RP E++ L PD++ + E+G RYC K FGI + GA+N+ EL+
Sbjct: 412 LLSGTPILARPNEIYNLTRILRPDIFYSFKEFGLRYCNPKESYFGIDWTGAANNRELYQT 471
Query: 389 MKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEE 448
+K + MIRR+K++VL +LP KRRQ++ + +++I+ + ++++ + KI K E
Sbjct: 472 LKNSFMIRRMKQEVLTELPAKRRQRISISTDSNQVKKIHYMLKKVKNWQDKI-GRKGENA 530
Query: 449 VQSLK-----FTEKNLINKI------------------YTDSAEAKIPAVLDYLETVIEA 485
L F +++ N + Y + AKI + +++ET++E
Sbjct: 531 FGDLTDDFDGFVQQHGDNMMADPTFSSLDDKYSYLVNAYGLTGTAKIKGIQEFIETLLEN 590
Query: 486 GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSM 545
CKFLIFAHH +LDAI +KKKV IRIDG R V +FQ + AVLS+
Sbjct: 591 RCKFLIFAHHYDVLDAIEDTVIKKKVSHIRIDGKIDVTKRYEAVRKFQTDSECLVAVLSL 650
Query: 546 KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWD 605
A G+TLTAASTV+FAE++WTPG ++QAEDRAHRIGQ++SVNVYYL +T+D +++
Sbjct: 651 TASCTGITLTAASTVVFAEMNWTPGIMVQAEDRAHRIGQINSVNVYYLFGENTLDAMIYP 710
Query: 606 VVRSKLENLGQVLDG 620
++ K E V+DG
Sbjct: 711 RLKLKSEVFANVVDG 725
>gi|301755790|ref|XP_002913754.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Ailuropoda melanoleuca]
Length = 959
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 221/573 (38%), Positives = 325/573 (56%), Gaps = 46/573 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A Y L++ F+++ +++ K R W F L K++ + V+++ L +
Sbjct: 350 ADIGYSEDLMALFKQMESRSYDVKTRKWNF---LLEEHNKLIQSVRCLPQVQLDPLPTTL 406
Query: 147 QRAIASA--SAAPDLREKYDQ-----IPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS +P L E + + + S LLPFQR GV FA+ GR+LLAD+MG
Sbjct: 407 TLAFASQLEKTSPCLTEPIPEADLSGVDPKLVSNLLPFQRAGVNFAVAKRGRLLLADDMG 466
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A +R WP+L++ PSS+R W QWL ++ P I VV++ G +R
Sbjct: 467 LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLQWLPSLSPDRINVVVT---GKDR 523
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN + R
Sbjct: 524 L--------------TAGLVNIVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNIKTARCR 568
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA+SRP EL+ Q+ + P + H +G RYC K +G
Sbjct: 569 AAMPLLKVAKRVILLSGTPAMSRPSELYTQIIGVRPTFFPQFHAFGLRYCDAKRQPWGWD 628
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVLAQLP K+R+ V + A + A
Sbjct: 629 YSGSSNLGELKLLLEEAVMLRRLKCDVLAQLPPKQRKMVVIAPARISTKARAA------- 681
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
A K + + K +K + + +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 682 ---LAAAAKEMTTMNNTKRQQKEALLLFFNRTAEAKIPSVIEYILDLLESGREKFLVFAH 738
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +L AI + +K V IRIDG T A R+ L +FQ + AVLS+ A +GLT
Sbjct: 739 HKVVLSAITRELERKHVPHIRIDGSTSSADREDLCQQFQLFEKHAVAVLSITAANMGLTF 798
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
++A V+FAEL W PG L+QAEDR HRIGQ SSV+++YL+A T DD +W +++ K++ L
Sbjct: 799 SSADLVVFAELFWNPGVLLQAEDRVHRIGQASSVSIHYLVARGTADDYLWPLIQEKIKVL 858
Query: 615 GQVLDGHENSLEVS--SSQIRSSPAKQKTLDSF 645
G+ N E++ ++ P +QK D F
Sbjct: 859 GEAGLSETNFSEMTEATNYFYKDPKQQKIYDLF 891
>gi|324505946|gb|ADY42546.1| SMARCAL1-like protein [Ascaris suum]
Length = 696
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 215/583 (36%), Positives = 323/583 (55%), Gaps = 48/583 (8%)
Query: 73 KLSVKFFLHTSGNIAAKFT-YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSE 131
++ V F L FT + LV+A +++P +++ ++LW+FP+ ++ E+ L+
Sbjct: 126 EVEVTFSLIDECFFGVTFTPFHESLVTALKEVPSKSYDPVKKLWSFPIGDVNLVEEKLNT 185
Query: 132 ISGYNVEI----ENLHPLVQRAIASASAAPDLREKYDQ-IPAHIESKLLPFQRDGVRFAL 186
I V + EN+ ++ R S P+ + + + + L PFQR GV F +
Sbjct: 186 IKHVTVLLHRIPENVLSIL-REHNDMSKTPNKKISLESAVDRTLVDALFPFQRKGVLFGI 244
Query: 187 QHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEI 246
Q GR+L+ADEMGLGKTIQA+A+ F WP+LI+ PSS++ W I+ +L P
Sbjct: 245 QRRGRLLIADEMGLGKTIQALAIMRYFSSDWPLLIVCPSSVKFSWMNQIKTFL--PSVNN 302
Query: 247 VVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADES 306
+ +L + GS++ +S I+SYD+++ + L+ F+ ++ DES
Sbjct: 303 MCILEK--GSDQLPMQKSASTVA----------IMSYDLMVIKRKHLLEYAFQAIVFDES 350
Query: 307 HFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNR 366
H +K+ QA+RT I KKA +LLSGTPALSRP+ELF Q+ + P ++ N ++ R
Sbjct: 351 HMIKDGQAQRTKVATDISKKALRVILLSGTPALSRPVELFSQIRIIDPKIFPNFRDFAIR 410
Query: 367 YCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDM 423
YC G G F +G +N EEL ++ ++MIRRLKKDVL LP KRR+ VFL+
Sbjct: 411 YCDGKQGRFSFEAKGCTNSEELALILSNSIMIRRLKKDVLDDLPEKRREVVFLNDGS--- 467
Query: 424 RQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYL-ETV 482
++V +++ K+ + K T+ + Y ++ AK +V ++ +
Sbjct: 468 ---------IDVNISNLRSAKAAYHGAADKDTKHQCLVGYYYETGIAKAKSVASHIVDNF 518
Query: 483 IEAGC---KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
G K L+FAHHQ +LD I KK + IRIDG T SR+ FQE DDV
Sbjct: 519 FYEGAPRRKVLVFAHHQVVLDTISMYVTKKGLRSIRIDGTTASKSREEQCRLFQEDDDVV 578
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
A+LSM A G+G+TLTAA+ V+FAEL W PG L QAEDRAHR+GQ SV V YLLAN T
Sbjct: 579 VAILSMTAAGLGITLTAATVVVFAELHWNPGTLKQAEDRAHRVGQTDSVFVQYLLANRTA 638
Query: 600 DDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTL 642
DD++W +++ KL+ LG S +SS + + + QK +
Sbjct: 639 DDVMWPLIQRKLDVLG--------SCHLSSDSYKEADSVQKNV 673
>gi|156101331|ref|XP_001616359.1| helicase [Plasmodium vivax Sal-1]
gi|148805233|gb|EDL46632.1| helicase, putative [Plasmodium vivax]
Length = 877
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 192/512 (37%), Positives = 301/512 (58%), Gaps = 56/512 (10%)
Query: 149 AIASASAAPDLREKYDQIPAHIESKLLP----FQRDGVRFALQHGGRILLADEMGLGKTI 204
+I +++ P ++ YD++ + KL FQR+GV F L+ GR+L+ DEMGLGKT+
Sbjct: 286 SILTSTLCPYTKKNYDKMDILVGDKLSAELKNFQREGVFFGLKKNGRVLIGDEMGLGKTL 345
Query: 205 QAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLN--IPPSEIVVVLSQLGGSNRSGFT 262
QA+A+ +++ WP +++ PSS+R W +WL+ + +I VV +SG
Sbjct: 346 QALALMAFYQEDWPFIVVCPSSIRFQWKDQALRWLSHLLTEDQICVV--------KSG-- 395
Query: 263 IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLP 322
K ++P + IISY+++ K N + +K ++ DESH+LKN+ +KRT A P
Sbjct: 396 ------KTDVPRNCKMIIISYELMTK--NDKYQNKYKSIVCDESHYLKNSFSKRTKAITP 447
Query: 323 IIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI---YQ 377
II+ A+ +LLSGTPAL++P EL++Q+ ++ P+++ N HE+ RYC ++ Y
Sbjct: 448 IIRSAKRCVLLSGTPALNKPSELYEQVSSIIPNLF-NYHEFCERYCFKDKNIYTRKIEYV 506
Query: 378 GASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVK 437
G + EELH + T+MIRRLKKDVL +LP K R ++ +++ K++ +I R+LE K
Sbjct: 507 GCKHTEELHLFLTNTIMIRRLKKDVLKELPEKLRSKIPVEIPPKELSEIITYHRKLESKK 566
Query: 438 GKIKACKSEEEVQSLKF--------------------TEKNL-INKIYTDSAEAKIPAVL 476
+++ L F E+N+ I+ ++ + AK+ A+
Sbjct: 567 N----INISDDLDELPFPSGGNEYGYGQTASGIPNRGDEENVSISHLFKMTGYAKVKAIK 622
Query: 477 DYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD 536
+Y+ +I+A KFL+F HH+ ++D I +KK IR+DG TP R+ + FQ D
Sbjct: 623 EYITYLIDADIKFLLFCHHKLVMDEIDDFLREKKTMFIRVDGLTPIEKREVYIKSFQNDD 682
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSS-VNVYYLLA 595
VK A+LS+ A G+GL LTAA+TV+F EL W PG +IQAEDRAHRIG VN++YL+A
Sbjct: 683 HVKIALLSLTACGIGLNLTAANTVVFGELYWVPGQIIQAEDRAHRIGTTHEVVNIHYLIA 742
Query: 596 NDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
+T+D+IVW ++ K L L+G E+SL V
Sbjct: 743 QNTIDEIVWKIINRKWNTLTTALNGMEDSLNV 774
>gi|351712844|gb|EHB15763.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1, partial
[Heterocephalus glaber]
Length = 942
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 205/483 (42%), Positives = 290/483 (60%), Gaps = 36/483 (7%)
Query: 172 SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHW 231
S L+PFQR GV FA+ GR+LLAD+MGLGKTIQAI +AT +R WP+L++ PSS+R W
Sbjct: 424 SNLMPFQRAGVNFAIAKRGRLLLADDMGLGKTIQAICIATFYRKEWPLLVVVPSSVRFTW 483
Query: 232 AAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQ 290
+WL ++ P I VV++ G GL NI+S+D++ KL+
Sbjct: 484 EQAFLRWLPSLSPERINVVVNGKGCLTA-----------------GLVNIVSFDLLSKLE 526
Query: 291 NILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLE 350
L +S FK+VI DESHFLKN + R A +PI+K A+ +LLSGTPA+SRP EL+ Q+
Sbjct: 527 RQLKTS-FKVVIIDESHFLKNIKTARCRAAVPILKVAKRVILLSGTPAMSRPAELYTQII 585
Query: 351 ALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLP 407
A+ P + H +G RYC K +G Y G+SN EL L++ +M+RRLK DVL+QLP
Sbjct: 586 AVKPTFFPQFHAFGLRYCDAKRQHWGWDYSGSSNLGELKLLLEEAIMLRRLKSDVLSQLP 645
Query: 408 VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDS 467
K+R+ V + A R + + A E + K +K + + +
Sbjct: 646 AKQRKMV-----------VVAPGRISAKARASLAAAAKEMTRKITKEQQKEALIVFFNRT 694
Query: 468 AEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQ 526
AEAKIP V++Y+ ++E+G KFL+FAHH+ +LDAI + +K V IRIDG T A R+
Sbjct: 695 AEAKIPCVIEYILDLLESGREKFLVFAHHKVVLDAITKELERKHVPHIRIDGSTLSADRE 754
Query: 527 ALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVS 586
AL +FQ + AVLS+ A +GLT ++A V+FAEL W PG LIQAEDR HRIGQ S
Sbjct: 755 ALCQQFQLSERHSVAVLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTS 814
Query: 587 SVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS--SSQIRSSPAKQKTLDS 644
SV ++YL+A T DD +W +++ K++ LG+ N E++ ++ + P +Q D
Sbjct: 815 SVGIHYLVARGTADDYLWPLIQEKIKVLGEAGLSETNFSEMTEATNYLYKDPKQQMIYDL 874
Query: 645 FLK 647
F K
Sbjct: 875 FQK 877
>gi|401826672|ref|XP_003887429.1| Snf2/Rad54-like helicase [Encephalitozoon hellem ATCC 50504]
gi|395459947|gb|AFM98448.1| Snf2/Rad54-like helicase [Encephalitozoon hellem ATCC 50504]
Length = 559
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 217/606 (35%), Positives = 327/606 (53%), Gaps = 81/606 (13%)
Query: 59 PKGSLGDFSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFP 118
P G D KE+V + +K ++ G + K + + L + K+ ++ ++ K W
Sbjct: 21 PMGKSPDL-KEEVNSIKIKVYVGEDGRVVLKPS-NKRLSTELSKLEESMYDIKSNEWRIS 78
Query: 119 VPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASAS---AAPDLREKYDQIPAHIESKLL 175
V S L + LV I + A ++ E+ ++ I LL
Sbjct: 79 VRDYISVRGELRR-----------NKLVFDEIPKGTLRIAGKEMDEEEFELAGDIYDMLL 127
Query: 176 PFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMI 235
PFQR+GVR+AL GRI++AD+MGLGKTIQA+AV+ +R WP+LI+ P+SL WA
Sbjct: 128 PFQREGVRYALSRRGRIIIADDMGLGKTIQALAVSYYYRSEWPLLIIAPASLLDDWADAC 187
Query: 236 QQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMS 295
+++L E +V+ + G ++ ++SY+V + L+
Sbjct: 188 KRFLG----EEAMVMRRKGDFGQT------------------IGVVSYEVASSNVSGLLE 225
Query: 296 SNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPD 355
+VI DE H+LK+ KRT A +P+++K A+LLSGTPA+SRP+EL+ + ++
Sbjct: 226 HKAGVVIVDECHYLKSLNTKRTKAIVPLLQKVPRAILLSGTPAVSRPLELYPIIASIDRT 285
Query: 356 VYKNVHEYGNRYCKGGVFGI---YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQ 412
++ EYG RYC G G+ Y+G SN EELH ++K +MIRR K +VL+QLP K R+
Sbjct: 286 IFPRFAEYGARYCNGRKVGLWYDYKGCSNAEELHYVLKKCLMIRRTKDEVLSQLPPKFRR 345
Query: 413 QVFLDVAEK--DMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEA 470
QV L K D R+ EVV + A N++ + Y ++ +
Sbjct: 346 QVILQCEGKQSDPRK--------EVVGESVDA---------------NVVVQ-YKEAVKL 381
Query: 471 KIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVT 530
K+ V YL T++E KF++F HH M+D I + F++++V IRIDG P +R LV
Sbjct: 382 KMGPVKQYLATMLEKSMKFVVFCHHSEMMDGIEEFFVERRVPMIRIDGSVPSGNRHPLVR 441
Query: 531 EFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNV 590
+FQE D+++ A+LS+ A GLTLTA V+FAEL W PG L+QAEDR HRIGQ SV++
Sbjct: 442 DFQENDEIRVALLSITACSTGLTLTAGRAVVFAELYWNPGVLLQAEDRIHRIGQKGSVDI 501
Query: 591 YYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIR-----SSPAKQKTLDSF 645
YL+A T+D+ VW + SKL L SL + S+Q++ S + QKTL
Sbjct: 502 IYLVARGTIDEYVWPKLLSKLNVL--------ESLGIGSNQLKNVGVSSQSSGQKTLYQL 553
Query: 646 -LKRCN 650
+K+CN
Sbjct: 554 NIKKCN 559
>gi|47226328|emb|CAG09296.1| unnamed protein product [Tetraodon nigroviridis]
Length = 671
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 221/571 (38%), Positives = 321/571 (56%), Gaps = 73/571 (12%)
Query: 90 FTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRA 149
F+ D +++AF+++P ++ K R W+F + +LS+I+ VE PL +
Sbjct: 121 FSVD--VIAAFKQMPTKNYDMKSRKWSFSLEDYKRLMDLLSKIAAVEVE-----PLPRAV 173
Query: 150 IASASAAPDLRE-KYDQIP--------AHIESKLLPFQRDGVRFALQHGGRILLADEMGL 200
+ + SA D E + Q+P + L+PFQR+GV FA+ GR+LLAD+MGL
Sbjct: 174 VQAFSARFDGTEARSSQVPEADLSGVDPALTCSLMPFQREGVNFAVSRQGRLLLADDMGL 233
Query: 201 GKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVL--------SQ 252
GKT+QAI +A +R WP+L++ PSS+R WA E V+VL +
Sbjct: 234 GKTVQAICIAAYYRSEWPLLVVAPSSVRFTWA------------EGVIVLHLTKSRAPTS 281
Query: 253 LGGSNR-----SGFTIVSSNTKRNIP-----------------LDGLFNIISYDVVLKLQ 290
GG+ + G +++ + +R +P GL NIISYD++ ++
Sbjct: 282 SGGTTKEELCDCGLSLLPAAFRRWLPSLSADNINVVVKAKDGLQSGLVNIISYDLLSRI- 340
Query: 291 NILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLE 350
N F ++I DESHFLKN + R A LP++K A+ +LLSGTPA+SRP EL+ Q+
Sbjct: 341 NKQSGRPFNVLIMDESHFLKNMKTARCKAALPLLKAAKRVILLSGTPAMSRPSELYTQIL 400
Query: 351 ALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLP 407
A+ P ++ HE+G RYC K +G Y G+SN EL L++ +M+RRLK DVL+QLP
Sbjct: 401 AVRPLLFPRFHEFGVRYCDAKQSTWGWDYSGSSNLGELKLLLEEALMLRRLKSDVLSQLP 460
Query: 408 VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDS 467
K+R+ V + + + R AL A K + K EK + Y +
Sbjct: 461 AKQRKVVTVTIDGINSRIKAALS----------AAAKQLAKGHPNKKEEKEALLVFYNHT 510
Query: 468 AEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQ 526
AEAK+ A+++Y+ ++E G KFL+FAHH+ +LD I KK V IRIDG TP A RQ
Sbjct: 511 AEAKLQAIMEYITDMLEGGREKFLVFAHHKLVLDHITAELEKKNVVYIRIDGSTPSAERQ 570
Query: 527 ALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVS 586
L +FQ AVLS+ A +GLTL +A VIFAEL W PG LIQAEDR HRIGQ +
Sbjct: 571 QLCEKFQFSSSSCVAVLSITAANMGLTLHSADLVIFAELFWNPGVLIQAEDRVHRIGQTN 630
Query: 587 SVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
+VN++YL+A + DD +W +++ K+ L QV
Sbjct: 631 NVNIHYLVAKGSADDHLWPLIQEKMNVLEQV 661
>gi|74005708|ref|XP_536062.2| PREDICTED: SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily a-like 1 [Canis lupus
familiaris]
Length = 961
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 219/573 (38%), Positives = 321/573 (56%), Gaps = 46/573 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A Y LV+ F+++ +++ K R W F L K++ + V+++ L +
Sbjct: 352 ADIGYSEALVALFKQMDSRSYDVKTRKWNF---LLEEHNKLIQRVRCLPQVQLDPLPKTL 408
Query: 147 QRAIASA--SAAPDLREKYDQ-----IPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS +P L + + + + S LLPFQR GV FA+ GR+LLAD+MG
Sbjct: 409 TLAFASQLEKTSPCLTQPIPEADLSGVDPKLVSSLLPFQRAGVNFAIAKRGRLLLADDMG 468
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A ++ WP+L++ PSS+R W +WL ++ P I VV++ G +R
Sbjct: 469 LGKTIQAICIAAFYQKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPERINVVVT---GKDR 525
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN + R
Sbjct: 526 L--------------TAGLVNIVSFDLLSKLEKQL-KTPFKVVIIDESHFLKNIKTARCR 570
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA+SRP EL+ Q+ + P + H +G RYC K +G
Sbjct: 571 AAMPLLKVAKRVILLSGTPAMSRPAELYTQIIGVRPTFFPQFHAFGLRYCDAKRQPWGWD 630
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVLAQLP K+R+ V + R AL
Sbjct: 631 YSGSSNLGELKLLLEEAVMLRRLKCDVLAQLPPKQRKMVIIAPGRISTRARAAL------ 684
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
K + K +K + + +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 685 ----DAVAKEMTTMDKTKQQQKEALLLFFNRTAEAKIPSVIEYILDLLESGREKFLVFAH 740
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +L A+ + KK V I IDG T A R+ L +FQ + AVLS+ A +GLT
Sbjct: 741 HKVVLSAVTRELEKKHVPHIHIDGSTSSADREDLCQQFQLFEKHAVAVLSITAANMGLTF 800
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
T+A V+FAEL W PG L+QAEDR HRIGQ SSV+++YL+A T DD +W +++ K++ L
Sbjct: 801 TSADLVVFAELFWNPGVLLQAEDRVHRIGQSSSVSIHYLVAKGTADDYLWPLIQEKIKVL 860
Query: 615 GQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSF 645
G+ N E++ + P +QK D F
Sbjct: 861 GEAGLSETNFSEMTEAPNYFYKDPKQQKIYDLF 893
>gi|6693793|gb|AAF24985.1|AF088884_1 HepA-related protein Harp [Mus musculus]
Length = 910
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 212/567 (37%), Positives = 320/567 (56%), Gaps = 50/567 (8%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLVQRAI 150
Y ++ F+++ +++ K R W+F L K+++ V+++ L V A
Sbjct: 308 YSEAVIGLFKQMESRSYDIKTRKWSF---LLEEHNKLIARSRELKQVQLDPLPKTVTLAF 364
Query: 151 AS--ASAAPDLREKYDQ-----IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKT 203
AS +P L+ + + A + S L+PFQR+GV FA+ GR+LLAD+MGLGKT
Sbjct: 365 ASQLEKTSPKLKADVPEADLSGVDAKLVSSLMPFQREGVSFAISKRGRLLLADDMGLGKT 424
Query: 204 IQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFT 262
+QAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G
Sbjct: 425 VQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPENINVVVTGKGRLTA---- 480
Query: 263 IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLP 322
GL NI+S+D++ KL+ L + FK+VI DESHFLKN + R A +P
Sbjct: 481 -------------GLVNIVSFDLLCKLERQLKTP-FKVVIIDESHFLKNIKTARCRAAVP 526
Query: 323 IIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI---YQGA 379
I+K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC Y G+
Sbjct: 527 ILKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRLPWGWDYSGS 586
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL-EVVKG 438
SN EL L++ +M+RRLK DVL+QLP K+R+ V ++ R AL E+ K
Sbjct: 587 SNLGELKLLLEEAIMLRRLKSDVLSQLPAKQRKMVVVNPGRISSRAKAALDAAAKEMTKD 646
Query: 439 KIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQP 497
K K +K + + +AEAKIP V++Y+ ++++G KFL+FAHH+
Sbjct: 647 KTKQ------------QQKEALLVFFNRTAEAKIPCVVEYILDLLDSGREKFLVFAHHKV 694
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
+LDA+ + +K V IRIDG P +R+ FQ A+LS+ A +GLT + A
Sbjct: 695 ILDAVAKELERKNVQHIRIDGSRPTRARELKCQRFQLSKGHTVALLSIPAANMGLTFSTA 754
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
V+FAEL W PG LIQAEDR HRIGQ +SV+++YL+A T DD +W +++ K++ LG+
Sbjct: 755 DLVVFAELFWNPGVLIQAEDRVHRIGQTNSVSIHYLVAKGTADDYLWPLIQEKIKVLGEA 814
Query: 618 LDGHENSLEVSSSQ--IRSSPAKQKTL 642
N E++ + + +P KQKT+
Sbjct: 815 GLSETNFSEMTEATDYVHKAP-KQKTI 840
>gi|66812928|ref|XP_640643.1| SNF2-related domain-containing protein [Dictyostelium discoideum
AX4]
gi|60468538|gb|EAL66541.1| SNF2-related domain-containing protein [Dictyostelium discoideum
AX4]
Length = 1021
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 200/473 (42%), Positives = 287/473 (60%), Gaps = 42/473 (8%)
Query: 168 AHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSL 227
+ + S LLPFQ G+ F ++ GGR L+AD+MGLGKTIQ I++A +++ WP+LI+ PSSL
Sbjct: 339 SELPSTLLPFQIKGIEFGIEKGGRCLIADDMGLGKTIQGISIAYHYKEEWPLLIIAPSSL 398
Query: 228 RLHWAAMIQQWL--NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDV 285
RL WA I+++ I SEI +V++ G L+G+ NIISYD+
Sbjct: 399 RLVWADQIEKFFPNKIQSSEINLVMNGKCG------------------LNGMINIISYDL 440
Query: 286 VLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIEL 345
V K ++ ++ NFK+VIADE H++K ++R+ +T ++K+++ +LLSGTPALSRP+EL
Sbjct: 441 VTKKKDQILQKNFKVVIADECHYIKQFNSQRSKSTAEVLKRSKRCILLSGTPALSRPMEL 500
Query: 346 FKQLEALYPDVYKNVHEYGNRYC----KGGVFGIYQGASNHEELHNLMKATVMIRRLKKD 401
F Q+ + P + +Y RYC + F G SN +EL NL T MIRRLK D
Sbjct: 501 FIQISCINP-YFMQWRDYAFRYCAAFQEKFCFNT-SGCSNMKEL-NLYLNTFMIRRLKDD 557
Query: 402 VLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKN--- 458
V+ +LP KRR+++ + + + ++++ E+ + K F KN
Sbjct: 558 VMTELPEKRRERILVKLDKTKLKEVQKTLVEINQHR---KVYLDPNTDMKTSFKNKNSRQ 614
Query: 459 -LINKIYTDSAEAKIPAVLDYL-ETVIEAGC--KFLIFAHHQPMLDAI-HQL----FLKK 509
L K+ D+ K+ AV +L E +++A KFLIFAHH+ +++ I H L KK
Sbjct: 615 GLFFKLLRDTGLYKLTAVTQFLKEKLVDAPIDQKFLIFAHHKEVINGIVHMLGKIKVDKK 674
Query: 510 KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTP 569
K+ I+IDG TP +R V +FQ + + AVLS+ A G GLTLTAA+ VIFAELSWTP
Sbjct: 675 KLEFIKIDGSTPAQNRNDYVNDFQNDPNCRVAVLSITAAGTGLTLTAATCVIFAELSWTP 734
Query: 570 GDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
G L QAEDRAHR GQ SSV V YL+A TVD+++W +V SK LG+VLD +
Sbjct: 735 GVLFQAEDRAHRYGQTSSVLVQYLIALGTVDEMIWSLVESKKTLLGRVLDDED 787
>gi|303389620|ref|XP_003073042.1| Snf2/Rad54-like helicase [Encephalitozoon intestinalis ATCC 50506]
gi|303302186|gb|ADM11682.1| Snf2/Rad54-like helicase [Encephalitozoon intestinalis ATCC 50506]
Length = 556
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 192/495 (38%), Positives = 287/495 (57%), Gaps = 64/495 (12%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTP 224
++ I LLPFQR+GV++AL+ GGRI++AD+MGLGKTIQA+AV+ +R WP+LI+ P
Sbjct: 117 ELLGDIYGMLLPFQREGVQYALRQGGRIIVADDMGLGKTIQALAVSYYYRSEWPLLIIAP 176
Query: 225 SSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
+SL WA +++L E VV+ +R + I+SY+
Sbjct: 177 ASLLEDWADACRRFLG----EDAVVM------------------RRKEDFGQVVGIVSYE 214
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
+ ++L+ S +VIADE H+LK+ KRT A +P++++A ALLLSGTPA+SRP+E
Sbjct: 215 MASSNGSVLLGSKAGVVIADECHYLKSMNTKRTKAIVPLLQRASRALLLSGTPAVSRPLE 274
Query: 345 LFKQLEALYPDVYKNVHEYGNRYCKG---GVFGIYQGASNHEELHNLMKATVMIRRLKKD 401
L+ + ++ ++ EYG RYC G G + Y+G SN EELH ++K +MIRR K +
Sbjct: 275 LYPIISSIDRTIFPRFAEYGARYCNGRKVGQWYDYKGCSNAEELHYILKKCLMIRRTKDE 334
Query: 402 VLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLIN 461
VL+QLP K R+QV L CK ++ + + +N+
Sbjct: 335 VLSQLPPKFRRQVVLQ-------------------------CKGKQRDPAKELVGENVDT 369
Query: 462 KI---YTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDG 518
+ Y ++ + KI V Y+ T++E KF+IF HH M+D + + +K V IRIDG
Sbjct: 370 NVVAQYREAVKLKIDQVKQYISTIVEKDMKFIIFCHHVEMMDGLEEFLREKGVSIIRIDG 429
Query: 519 GTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDR 578
TP ++R LV FQE +++K A+LS+ A GLTLTA V+FAEL W PG L+QAEDR
Sbjct: 430 STPSSNRHMLVKSFQENEEIKTALLSITACSTGLTLTAGRAVVFAELYWNPGVLLQAEDR 489
Query: 579 AHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAK 638
HRIGQ +SV++ YL+A T+D+ VW + SKL L SL + S+Q+++ A
Sbjct: 490 IHRIGQKNSVDIIYLVARGTIDEYVWPKLLSKLNVL--------ESLGIGSNQLKNVGAT 541
Query: 639 QKTLDSF---LKRCN 650
+ + + +K+CN
Sbjct: 542 SQLGNLWQFNIKKCN 556
>gi|403352916|gb|EJY75987.1| DNA helicase, putative [Oxytricha trifallax]
Length = 1241
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 187/504 (37%), Positives = 293/504 (58%), Gaps = 56/504 (11%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P ++ L FQ+DGV F +Q GR LL DEMG+GKT+QA+AV+ FRD WP+L++
Sbjct: 255 DLLPQNLRETLFQFQKDGVSFGIQRFGRFLLGDEMGVGKTVQALAVSCIFRDDWPLLVIC 314
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I +WL +I PSEI ++ +SG K +I D IIS
Sbjct: 315 PSSLRYTWYDEILKWLQDIRPSEICLI--------KSG--------KESIMNDAKIYIIS 358
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
Y++ K+ + + + I DE+H+LK + R+ +PI+ + + +LLSGTP L+RP
Sbjct: 359 YEIASKITDQFVKRGIRFTIVDEAHYLKAHNSVRSKNLVPILSRMKRLVLLSGTPMLARP 418
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVMIRRLK 399
ELF L+ + PD+++ Y RYC K +G+ Y GASN +ELH++++ +MIRRLK
Sbjct: 419 AELFNLLKMVRPDIFQEFFSYATRYCNPKESQYGMDYTGASNIKELHHILEGKIMIRRLK 478
Query: 400 KDVLAQLPVKRRQQVFLDVAEKDMRQIYALF-REL----------EVVKGKIKACKSEEE 448
KDVL LP K RQ++ + +K + QI A+ R+L ++K + + +++
Sbjct: 479 KDVLKDLPPKIRQKIVVQTDKKYLMQIRAILKRDLSDAEERKNLENIIKDRNRRLAQQDQ 538
Query: 449 VQ--------------SLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAH 494
+ L +E+ ++K+Y + +AK+ +++Y++ +IE KF++FAH
Sbjct: 539 ISINGVSTEFQRDPQAELDDSEEKQLSKVYQLTGKAKLKGIIEYVDYMIENQVKFILFAH 598
Query: 495 HQPMLDAIHQLFLKKKVHC-----------IRIDGGTPPASRQALVTEFQEKDDVKAAVL 543
HQ ++ + + + IRIDG TP R LV EFQE + V+ A+L
Sbjct: 599 HQHVMSELENHLINRIQETENSQNLIPPKYIRIDGTTPTDIRHDLVREFQEDESVRVALL 658
Query: 544 SMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIV 603
S+ + G+TLTAASTVIFAE+ WTP ++QAEDRAHRIGQ VN+YYL +T+D+I+
Sbjct: 659 SITSSSQGITLTAASTVIFAEVHWTPALMMQAEDRAHRIGQNECVNIYYLYGKETLDEIL 718
Query: 604 WDVVRSKLENLGQVLDGHENSLEV 627
+ +++ K + + LD + ++
Sbjct: 719 FPMIKLKSTVIARTLDDSKTDFKI 742
>gi|170061901|ref|XP_001866436.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880007|gb|EDS43390.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 706
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 227/568 (39%), Positives = 312/568 (54%), Gaps = 51/568 (8%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIA 151
++ L+ F+ IP ++ + WTF V S ++ ++ ++ + V I + P V R +
Sbjct: 137 FNEKLIEVFKSIPSKQYDPGTKNWTFDVKDYSMVQERVTALNPH-VSIGPIPPFVLRILN 195
Query: 152 SASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVAT 211
+ P R I + + LL FQ++GV FA++ GGR ++ADEMGLGKT QAIAVA
Sbjct: 196 GQRSKPS-RACLSAIEPTLAASLLEFQKEGVCFAIEKGGRAMIADEMGLGKTYQAIAVAD 254
Query: 212 CFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRN 271
+++ WP+LI T +S R WAA I+Q L P +V L G + G
Sbjct: 255 FYKEDWPLLICTTASTRDVWAAKIRQLLPSVPVHNIVTLQ--SGQDYIG----------- 301
Query: 272 IPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
+ I SY ++ K L++ NF VI DESH LKN +AK T + K+A+ +
Sbjct: 302 ---EARVLITSYSMMEKSAEKLLARNFGFVIMDESHTLKNFKAKCTVVATDLAKQAKRVI 358
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNL 388
LLSGTPALSRP+ELF Q+ L + EY RYC G FG G SN EL+ L
Sbjct: 359 LLSGTPALSRPLELFSQVSMLDRKFFA-FREYSARYCAGRQTQFGWDATGQSNLPELNLL 417
Query: 389 MKATVMIRRLKKDVLAQLPVKRRQQVFLDVA--------EKDMRQIYALFRELEVVKGKI 440
+ A MIRR K+DV++QL K R+ V LD + E+D+ Q YA + + KGK
Sbjct: 418 LAAKFMIRRTKQDVMSQLAEKSRETVLLDPSLLWTNQEMEEDL-QTYAA--DYSISKGKQ 474
Query: 441 KACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLD 500
+ EE+ + K Y +AEAK PAV YL+ V++ G KFLIFAHH MLD
Sbjct: 475 R-----EEI----------MFKYYNATAEAKAPAVCAYLQKVLKEGQKFLIFAHHIKMLD 519
Query: 501 AIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTV 560
A+ + K KV IRIDG T R LV +FQ KD +AA+LS+KA G+TLTAA V
Sbjct: 520 AVSRELDKLKVDHIRIDGTTRSDVRSELVNKFQTKDACRAAILSLKACNAGITLTAAQLV 579
Query: 561 IFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
IFAEL W P L QAE RAHRIGQ +V V YLLA T DDI+W +++ K L +
Sbjct: 580 IFAELDWNPSTLAQAESRAHRIGQEGAVLVRYLLAKGTADDIIWTMLQKKQTVLNKAGLC 639
Query: 621 HENSLEVSSSQIRSSPAKQKTLDSFLKR 648
+E+ S S +P ++ +L++
Sbjct: 640 NED---FSDSTHVDAPCSAGNIEPYLEK 664
>gi|403336296|gb|EJY67338.1| DNA helicase, putative [Oxytricha trifallax]
Length = 1072
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 187/504 (37%), Positives = 293/504 (58%), Gaps = 56/504 (11%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P ++ L FQ+DGV F +Q GR LL DEMG+GKT+QA+AV+ FRD WP+L++
Sbjct: 255 DLLPQNLRETLFQFQKDGVSFGIQRFGRFLLGDEMGVGKTVQALAVSCIFRDDWPLLVIC 314
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I +WL +I PSEI ++ +SG K +I D IIS
Sbjct: 315 PSSLRYTWYDEILKWLQDIRPSEICLI--------KSG--------KESIMNDAKIYIIS 358
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
Y++ K+ + + + I DE+H+LK + R+ +PI+ + + +LLSGTP L+RP
Sbjct: 359 YEIASKITDQFVKRGIRFTIVDEAHYLKAHNSVRSKNLVPILSRMKRLVLLSGTPMLARP 418
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVMIRRLK 399
ELF L+ + PD+++ Y RYC K +G+ Y GASN +ELH++++ +MIRRLK
Sbjct: 419 AELFNLLKMVRPDIFQEFFSYATRYCNPKESQYGMDYTGASNIKELHHILEGKIMIRRLK 478
Query: 400 KDVLAQLPVKRRQQVFLDVAEKDMRQIYALF-REL----------EVVKGKIKACKSEEE 448
KDVL LP K RQ++ + +K + QI A+ R+L ++K + + +++
Sbjct: 479 KDVLKDLPPKIRQKIVVQTDKKYLMQIRAILKRDLSDAEERKNLENIIKDRNRRLAQQDQ 538
Query: 449 VQ--------------SLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAH 494
+ L +E+ ++K+Y + +AK+ +++Y++ +IE KF++FAH
Sbjct: 539 ISINGVSTEFQRDPQAELDDSEEKQLSKVYQLTGKAKLKGIIEYVDYMIENQVKFILFAH 598
Query: 495 HQPMLDAIHQLFLKKKVHC-----------IRIDGGTPPASRQALVTEFQEKDDVKAAVL 543
HQ ++ + + + IRIDG TP R LV EFQE + V+ A+L
Sbjct: 599 HQHVMSELENHLINRIQETENSQNLIPPKYIRIDGTTPTDIRHDLVREFQEDESVRVALL 658
Query: 544 SMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIV 603
S+ + G+TLTAASTVIFAE+ WTP ++QAEDRAHRIGQ VN+YYL +T+D+I+
Sbjct: 659 SITSSSQGITLTAASTVIFAEVHWTPALMMQAEDRAHRIGQNECVNIYYLYGKETLDEIL 718
Query: 604 WDVVRSKLENLGQVLDGHENSLEV 627
+ +++ K + + LD + ++
Sbjct: 719 FPMIKLKSTVIARTLDDSKTDFKI 742
>gi|281340244|gb|EFB15828.1| hypothetical protein PANDA_001570 [Ailuropoda melanoleuca]
Length = 957
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 222/573 (38%), Positives = 324/573 (56%), Gaps = 48/573 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A Y L++ F+++ + N K R W F L K++ + V+++ L +
Sbjct: 350 ADIGYSEDLMALFKQM--ESRNVKTRKWNF---LLEEHNKLIQSVRCLPQVQLDPLPTTL 404
Query: 147 QRAIASA--SAAPDLREKYDQ-----IPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS +P L E + + + S LLPFQR GV FA+ GR+LLAD+MG
Sbjct: 405 TLAFASQLEKTSPCLTEPIPEADLSGVDPKLVSNLLPFQRAGVNFAVAKRGRLLLADDMG 464
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A +R WP+L++ PSS+R W QWL ++ P I VV++ G +R
Sbjct: 465 LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLQWLPSLSPDRINVVVT---GKDR 521
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN + R
Sbjct: 522 L--------------TAGLVNIVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNIKTARCR 566
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA+SRP EL+ Q+ + P + H +G RYC K +G
Sbjct: 567 AAMPLLKVAKRVILLSGTPAMSRPSELYTQIIGVRPTFFPQFHAFGLRYCDAKRQPWGWD 626
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVLAQLP K+R+ V + A + A
Sbjct: 627 YSGSSNLGELKLLLEEAVMLRRLKCDVLAQLPPKQRKMVVIAPARISTKARAA------- 679
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
A K + + K +K + + +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 680 ---LAAAAKEMTTMNNTKRQQKEALLLFFNRTAEAKIPSVIEYILDLLESGREKFLVFAH 736
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +L AI + +K V IRIDG T A R+ L +FQ + AVLS+ A +GLT
Sbjct: 737 HKVVLSAITRELERKHVPHIRIDGSTSSADREDLCQQFQLFEKHAVAVLSITAANMGLTF 796
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
++A V+FAEL W PG L+QAEDR HRIGQ SSV+++YL+A T DD +W +++ K++ L
Sbjct: 797 SSADLVVFAELFWNPGVLLQAEDRVHRIGQASSVSIHYLVARGTADDYLWPLIQEKIKVL 856
Query: 615 GQVLDGHENSLEVS--SSQIRSSPAKQKTLDSF 645
G+ N E++ ++ P +QK D F
Sbjct: 857 GEAGLSETNFSEMTEATNYFYKDPKQQKIYDLF 889
>gi|350402620|ref|XP_003486546.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Bombus impatiens]
Length = 704
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 212/581 (36%), Positives = 319/581 (54%), Gaps = 54/581 (9%)
Query: 77 KFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY- 135
+F L TS +Y P LV A +K+ +++ K + W F L E V+ ++ +
Sbjct: 119 RFVLETS-------SYFPPLVEAIKKVSSRSYDMKTKQWNF---LLKDYETVIEKVINFK 168
Query: 136 -NVEIENL-HPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRIL 193
+++I L P++Q + ++ I + L+PFQR+GV + + GGR +
Sbjct: 169 SDIQITGLPKPVLQIFRKNDTSMNTENIDLLDIDPQLVGNLMPFQREGVCYGISKGGRCM 228
Query: 194 LADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQL 253
+AD+MGLGKTIQA+ +A FR WP+LI+TP+S+R WA I +L P+ + +
Sbjct: 229 IADDMGLGKTIQALGIAHYFRKNWPLLIVTPASVRYQWAEAIYTFLPSVPAHYIHQFA-- 286
Query: 254 GGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQ 313
NTK I + I +YD++++ + F VI DESH LK+ +
Sbjct: 287 -------------NTKDCIDSSKIV-ITTYDLLVRAMDTFERQIFGFVILDESHALKSLK 332
Query: 314 AKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG--G 371
R A ++ +A++ +LLSGTPALSRP+EL+ Q+ + P+ + EYG RYC G
Sbjct: 333 TARFNAAQCVVLQARHVVLLSGTPALSRPMELYSQINLIMPN-FMGYQEYGIRYCAGEKT 391
Query: 372 VFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLD-----VAEKDMRQ 425
+G + G+SN +EL L++ T +IRRLK DVL QLP K+R+ + LD V K+M +
Sbjct: 392 SYGWDFSGSSNMQELQLLLRRTCVIRRLKNDVLNQLPAKKREVIILDPGLIKVGTKEMVE 451
Query: 426 IYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA 485
I E EV+ G K + L++ Y +S AK A+ DY+ +
Sbjct: 452 ISKKL-EREVLNGMEK--------------HRTLLH-YYNESGVAKQKAICDYISKLFMN 495
Query: 486 GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSM 545
KF+IFAHHQ ++DAI + + IRIDG T P R+ + +FQ DD AVLS+
Sbjct: 496 KQKFIIFAHHQNVMDAICDVAESMDIKYIRIDGKTNPERRKYQIDQFQNCDDCTVAVLSI 555
Query: 546 KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWD 605
A G+TLT+A V+FAEL W PG L QAEDR HRIGQ +SV + YL+A T DD +W
Sbjct: 556 TAANAGITLTSAKLVVFAELFWNPGILCQAEDRVHRIGQDNSVIIQYLVAKQTADDYLWP 615
Query: 606 VVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFL 646
+++ K+ L +V SL+ +++ ++QKTLDSF+
Sbjct: 616 LIQKKMNVLNEVGLDQNFSLKDIDVTVQAFSSEQKTLDSFM 656
>gi|403355431|gb|EJY77291.1| hypothetical protein OXYTRI_01078 [Oxytricha trifallax]
Length = 1135
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 189/517 (36%), Positives = 299/517 (57%), Gaps = 33/517 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D++P + +KL FQ++G++F ++ GRI+LADEMG+GKT+QA+ ++ +R WP++I
Sbjct: 301 DKLPNQMINKLFNFQKEGIQFGIKRHGRIILADEMGVGKTVQALGISYIYRSEWPLIIFA 360
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
PS L+ W I +WL S V +L + K++ P+ I+SY
Sbjct: 361 PSQLKSQWKEEILKWLPDIHSNTVSILD---------------HAKQSWPIKSQIVILSY 405
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
++ KL + FK+ IADE+H+LK+ KRT A +PI+ KA+ LL+SGTP +SRP
Sbjct: 406 EIAQKLSATIEGFQFKVFIADEAHYLKSYNTKRTKALMPILMKAKRVLLISGTPMISRPN 465
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYC--KGGVFG-IYQGASNHEELHNLMKATVMIRRLKK 400
E++ ++ + PD+ HE+ RYC + +G Y G+ +EL+ L+ +++MIRRLKK
Sbjct: 466 EIYNIIKIVRPDITPFFHEFAERYCNPQNYQYGTCYNGSQCTQELNFLLTSSIMIRRLKK 525
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLI 460
VL QLP K RQ++ + +K Q++ L ++ K + +E L+ E+N
Sbjct: 526 TVLDQLPPKIRQKIEIKTDQKISGQVFKLMNKILDDKDCLPRFLQTQEKLYLQNQEQNFE 585
Query: 461 NK--------------IYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLF 506
N+ IY + AKIP ++++++ ++E KF+IFA+H +LDAI
Sbjct: 586 NQHEVPVQKQEDHIFSIYQLTGTAKIPGIIEFIQHLVECNVKFIIFAYHMNVLDAIEVFM 645
Query: 507 LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELS 566
+K V IRIDG T R V++FQ D A+L + + VGL LT+AST++FAE+
Sbjct: 646 NQKAVRFIRIDGSTSMNQRTLKVSQFQTDDFCLVAILGIHSCAVGLNLTSASTIVFAEMF 705
Query: 567 WTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
WTP + QAEDRAHRIGQ SSVN+YYL A T+DD+++ +++ K + L LDG + +E
Sbjct: 706 WTPSMMTQAEDRAHRIGQKSSVNIYYLFAPQTIDDVLYRMLQEKHKILASSLDGEQIQVE 765
Query: 627 VSSSQIRSSPAKQ-KTLDSFLKRCNNVDDSEHQQKLK 662
R AK+ + + F + C+N + + Q +K
Sbjct: 766 QKDKVNRDLIAKRAQQKNRFNEICSNQNGQQENQIVK 802
>gi|403361151|gb|EJY80271.1| SNF2 family N-terminal domain containing protein [Oxytricha
trifallax]
Length = 1461
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/490 (38%), Positives = 285/490 (58%), Gaps = 45/490 (9%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
+P + L FQ+ GV+F + H GRILL DEMG+GKTIQAI++A ++ WPVLI+TPS
Sbjct: 365 LPTSLFQSLYNFQKVGVQFGIDHHGRILLGDEMGVGKTIQAISIAYLYQKDWPVLIITPS 424
Query: 226 SLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
SL+ W + QW+ ++ P +I V + + + ++SY
Sbjct: 425 SLKFSWRDELLQWIEHLRPDQIQVF----------------QKSTEDFDPNCCVYLMSYV 468
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
+ KL + FKI+IADE+H+LK+ ++R+ +P++ K++ LLLSGTP L+RP E
Sbjct: 469 IATKLSQFIEKKKFKIMIADEAHYLKSRDSQRSKYLVPLLMKSKRVLLLSGTPILARPNE 528
Query: 345 LFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVMIRRLKKD 401
L+ + L PD++ + E+G RYC + FGI + G+SN ELH +++ ++MIRRLK +
Sbjct: 529 LYNLVRVLRPDIFFSFKEFGQRYCNPRESYFGIDWTGSSNMRELHLMLEKSLMIRRLKSE 588
Query: 402 VLAQLPVKRRQQVFLDVAEKDMRQIYALFREL---EVVKGKIKACKSE------EEVQSL 452
VL +LP KRRQ++ + + +++I + + + + +GK+ + EE L
Sbjct: 589 VLHELPAKRRQRITVQCDQHCLKKINYMLKNVKKWDDRQGKVVGQNGDLIQTVGEEFDKL 648
Query: 453 KFTEKNLIN---------------KIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQP 497
+ N++N Y + AK V ++L+T+IE G KF++FAHH
Sbjct: 649 Q-ENANILNDPALTELDDKYGYLLNAYALTGSAKAKGVCEFLDTLIENGSKFIVFAHHLE 707
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
+LD I +KKKV IRIDG R V +FQ + +LS+ A G+TLTAA
Sbjct: 708 VLDQIEDSVVKKKVDYIRIDGQIDTTKRYEAVRKFQTNEKCLIGILSLTASSQGITLTAA 767
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
STV+FAE++WTPG ++QAEDRAHRIGQ SSVNVYYL +TVD +++ ++ K E V
Sbjct: 768 STVVFAEMNWTPGIMVQAEDRAHRIGQSSSVNVYYLYGENTVDAMIYPRLKLKSEVFANV 827
Query: 618 LDGHENSLEV 627
LDG + ++
Sbjct: 828 LDGKQTEFKI 837
>gi|145207323|gb|AAH78216.2| Zranb3 protein [Danio rerio]
Length = 541
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 198/470 (42%), Positives = 280/470 (59%), Gaps = 29/470 (6%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
+P + KL+PFQR+GV FAL GR ++ADEMGLGKTIQAI+VA F+ WP+LI+ PS
Sbjct: 26 LPQKLREKLMPFQREGVCFALSRNGRCMIADEMGLGKTIQAISVAYIFKQEWPLLIVVPS 85
Query: 226 SLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
SL+ W +++W+ + P +I +V S+ T+ S +K I GL +
Sbjct: 86 SLKYPWIEELEKWIPELDPRDINLVESKTD-------TMSISTSKVTILGYGLLTTDAR- 137
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
L L F +V+ DESH+LK+ A R+ +PII+ A+ A+LL+GTPAL RP E
Sbjct: 138 ---ALLEALNKQRFAVVLVDESHYLKSRNAARSKILVPIIQSAKRAILLTGTPALGRPEE 194
Query: 345 LFKQLEALYPDVYKNVHEYGNRYCKGGV--FGIYQ-----GASNHEELHNLMKATVMIRR 397
LF Q++ALYP + +Y N+YC FG + GAS+ +ELH + + +MIRR
Sbjct: 195 LFMQIDALYPRRFGTWSDYANKYCNAHYRYFGARRQWDCRGASHLDELHKRL-SEIMIRR 253
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEK 457
LK VL QLP K RQ++ D+ + ++ A F + E K SE E Q ++
Sbjct: 254 LKNQVLTQLPPKIRQRIPFDLPKDAAKEASASFEQWE------KLMSSESENQFVEVM-- 305
Query: 458 NLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRI 516
+LI +Y +A AK AV DY++ ++E+ KFL+FAHH ML A + ++ K IRI
Sbjct: 306 SLITHMYKQTAVAKAGAVKDYIKMMLESEQLKFLVFAHHLSMLQACTEAVIEAKAGYIRI 365
Query: 517 DGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAE 576
DG P A R LV FQ D + AVLS++A G GLT TAAS V+FAEL W PG + QAE
Sbjct: 366 DGSVPSAERIQLVHRFQNDPDTRVAVLSIQAAGQGLTFTAASHVVFAELYWNPGHIKQAE 425
Query: 577 DRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
DRAHRIGQ ++V+++YL+A T D ++W ++ K G L+G + L+
Sbjct: 426 DRAHRIGQTATVHIHYLIAKGTFDTVMWAMLNRKETVTGSALNGKKEYLK 475
>gi|443684099|gb|ELT88125.1| hypothetical protein CAPTEDRAFT_113875 [Capitella teleta]
Length = 1042
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 198/511 (38%), Positives = 297/511 (58%), Gaps = 48/511 (9%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWP 218
+ + +P+ + +L+ FQ++GV FAL++ GR L+ADEMGLGKT+QA++ A FR+ WP
Sbjct: 1 MENRLSYLPSRLRGRLMAFQKEGVVFALKNAGRCLIADEMGLGKTLQALSAAYFFRNEWP 60
Query: 219 VLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSN--RSGFTIVSSNTKRNIPLD 275
+LI+ PSS+R W I++WL I P +I +V+S + N + +IV+
Sbjct: 61 LLIIVPSSIRYSWIEEIEKWLPEINPRDINLVMSGMDVGNIPTARISIVT---------- 110
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
+ +I + ++ L+ F+++I DESH +KN ++ T +P+++ A+ LL+G
Sbjct: 111 --YGLIRHPACKLVREALVKQKFQVLILDESHMIKNRKSAGTKFLVPLLRNAKRKFLLTG 168
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FG-----IYQGASNHEELHNL 388
TPALSRP ELF QLEAL P + N +++ RYC V FG I G SN EELH++
Sbjct: 169 TPALSRPEELFPQLEALDPKRFNNWNKFAQRYCDAHVQKFGRISRYITSGVSNAEELHSV 228
Query: 389 MKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE- 447
+ ++MIRRLK VL QLP K+RQ++ D+ + +++++ AC +
Sbjct: 229 LTTSLMIRRLKSAVLTQLPPKQRQKIPFDLKDSELKKVLNC------------ACSNSTW 276
Query: 448 -EVQSLKFT-EKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQ 504
V+ F E + + + ++ V DY++ + E+ K ++FAHH MLD++ Q
Sbjct: 277 TRVEPRFFVFENHFLFAVNFILISLQLGPVKDYVKMMCESCSEKMIVFAHHIMMLDSVCQ 336
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
++ K+ IRIDG T R V +FQ ++ AVLSMKA GVGLTLTAA+ VIFAE
Sbjct: 337 TLIENKIQFIRIDGSTCQQDRPHFVRQFQVDPSIRIAVLSMKAAGVGLTLTAANVVIFAE 396
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWD-------VVRSKLENLGQV 617
L WTPG + Q EDRAHRIGQ S+VNV+YL+AN TVD +W VV + L +
Sbjct: 397 LDWTPGHMEQCEDRAHRIGQKSNVNVHYLVANGTVDSYMWSALCRKTTVVTTTLNGCTKT 456
Query: 618 LD---GHENSLEVSSSQIRSSPAKQKTLDSF 645
L+ G N+++ S+ P K KT DS
Sbjct: 457 LEAEFGDGNAVQCLSNAEAYDPEKLKTNDSM 487
>gi|221057618|ref|XP_002261317.1| DNA helicase [Plasmodium knowlesi strain H]
gi|194247322|emb|CAQ40722.1| DNA helicase, putative [Plasmodium knowlesi strain H]
Length = 875
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 194/511 (37%), Positives = 300/511 (58%), Gaps = 56/511 (10%)
Query: 150 IASASAAPDLREKYDQ----IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQ 205
I + + P + YD+ + + ++L FQR+GV F L+ GR+L+ DEMGLGKT+Q
Sbjct: 285 ILTNTLCPYTEKNYDKMDILVGEKLSAELKNFQREGVYFGLKKNGRVLIGDEMGLGKTLQ 344
Query: 206 AIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLN--IPPSEIVVVLSQLGGSNRSGFTI 263
A+A+ +++ WP +++ PSS+R W +WL+ + +EI VV +SG
Sbjct: 345 ALALMAFYQEDWPFIVVCPSSIRFQWKDQALRWLSHLLSENEICVV--------KSG--- 393
Query: 264 VSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPI 323
K +IP + IISY+++ K N + +K ++ DESH+LKN+ +KRT A PI
Sbjct: 394 -----KTDIPRNCKMIIISYELMTK--NDKYQNKYKSIVCDESHYLKNSFSKRTKAITPI 446
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI---YQG 378
I+ A+ +LLSGTPAL++P EL++Q+ ++ PD++ N +E+ RYC ++ Y G
Sbjct: 447 IRSAKRCVLLSGTPALNKPSELYEQVSSIIPDLF-NYNEFCERYCFRDKNMYTRKFEYVG 505
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKG 438
+ EELH + T+MIRRLKKDVL +LP K R ++ +++ K++ +I R LE G
Sbjct: 506 CKHTEELHLFLTNTIMIRRLKKDVLKELPEKLRSKIPVEIPPKELSEILTYQRMLE---G 562
Query: 439 KIKACKSEEEVQSLKFT--------------------EKNL-INKIYTDSAEAKIPAVLD 477
K K E+++ T E+N+ I+ ++ + AK+ A+ +
Sbjct: 563 K-KNINLEDDLDGFPLTGGANEYGYGRTNIDTPNRIDEENVSISHLFKITGYAKVKAIKE 621
Query: 478 YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD 537
Y+ +I+A KFL+F HH+ ++D I + +KK IRIDG TP R+ + FQ D
Sbjct: 622 YITYLIDADIKFLLFCHHKLVMDEIDKFLTEKKCMFIRIDGLTPIDKRELYIKSFQNDDK 681
Query: 538 VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSV-NVYYLLAN 596
+K A+LS+ A G+GL LTAA+TV+F EL W PG +IQAEDRAHRIG V N++YL+A
Sbjct: 682 IKIALLSLTACGLGLNLTAANTVVFGELYWVPGQIIQAEDRAHRIGTTHEVINIHYLIAQ 741
Query: 597 DTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
T+D+ VW ++ K L L+G E+SL V
Sbjct: 742 KTIDETVWRIINRKWNTLTTALNGMEDSLNV 772
>gi|396081553|gb|AFN83169.1| Snf2/Rad54-like helicase [Encephalitozoon romaleae SJ-2008]
Length = 559
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 212/594 (35%), Positives = 324/594 (54%), Gaps = 74/594 (12%)
Query: 68 KEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEK 127
+E++ + +K +++ G + + + + L + K+ ++ ++ K W V S
Sbjct: 29 REEMNPIKIKVYVNEDGKVVLRPS-NKRLCTELSKLEESVYDVKSNEWRISVKDYIS--- 84
Query: 128 VLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQ 187
V E+ + + + R A ++ E+ ++ I LLPFQR+GV++AL
Sbjct: 85 VKGELKRNKLMFDEIPKGTLRI-----ACQEVDEEEFELFGDIYDMLLPFQREGVQYALS 139
Query: 188 HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIV 247
GRI++AD+MGLGKTIQA+A++ +R WP+LI+ P+SL WA +++L +E +
Sbjct: 140 RRGRIVVADDMGLGKTIQALAISYYYRSEWPLLIIAPASLLEDWADACKRFLG---AEAM 196
Query: 248 VVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESH 307
V+ +R I+SY+V N L+ +VIADE H
Sbjct: 197 VM-------------------RRKEDFGQTIGIVSYEVASSNANALLRCEVGVVIADECH 237
Query: 308 FLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRY 367
+LK+ Q KRT A +P++++ A+LLSGTPA+SRP+EL+ + ++ ++ EYG RY
Sbjct: 238 YLKSLQTKRTKAIVPLLQRVPRAVLLSGTPAVSRPLELYPIIASIDRTIFPRFAEYGARY 297
Query: 368 CKGGVFGI---YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK--D 422
C G G+ Y+G SN EEL+ ++K MIRR K +VLAQLP K R+QV L K D
Sbjct: 298 CNGRKVGLWYDYKGCSNAEELNYILKKCFMIRRTKDEVLAQLPPKFRRQVVLQCEGKQSD 357
Query: 423 MRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETV 482
R+ EVV + + N++ + Y ++ + K+ V YL T+
Sbjct: 358 PRK--------EVVGESV---------------DMNVVVQ-YREAVKLKMEQVKQYLATM 393
Query: 483 IEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAV 542
+E KF+IF HH M+D I + +++KV IRIDG P +R LV FQE D+++ A+
Sbjct: 394 MEKNMKFVIFCHHSEMMDGIEEFCVERKVPMIRIDGSIPSGNRHLLVKNFQENDEIRVAL 453
Query: 543 LSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDI 602
LS+ A GLTLTA V+FAEL W PG L+QAEDR HRIGQ SSV++ YL+ T+D+
Sbjct: 454 LSITACSTGLTLTAGRAVVFAELYWNPGVLLQAEDRIHRIGQKSSVDIIYLVGRGTIDEY 513
Query: 603 VWDVVRSKLENLGQVLDGHENSLEVSSSQIR-----SSPAKQKTLDSF-LKRCN 650
VW + SKL L SL + S+Q++ S + QKTL +KRCN
Sbjct: 514 VWPKLLSKLNVL--------ESLGIGSNQLKNVGVSSQASGQKTLYQLNIKRCN 559
>gi|82596817|ref|XP_726418.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481821|gb|EAA17983.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 875
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 181/477 (37%), Positives = 289/477 (60%), Gaps = 40/477 (8%)
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+ +L FQ++GV F L+ GR+L+ DEMGLGKT+QA+A+ + WP +++ PSS+R
Sbjct: 279 LSEELKNFQKEGVHFGLKKNGRVLIGDEMGLGKTLQALALMAFYNKDWPFIVICPSSIRF 338
Query: 230 HWAAMIQQWLN--IPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVL 287
W +WL I +EI V+ +SG K +IP + IISY+++
Sbjct: 339 QWKDQALRWLPHLIEENEICVI--------KSG--------KMDIPRNTKMIIISYELIT 382
Query: 288 KLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFK 347
K N + +K ++ DESH+LKN+ +KRT A +PIIK A+ +LLSGTPAL++P EL++
Sbjct: 383 K--NDKYQNKYKCIVCDESHYLKNSFSKRTKAIVPIIKSAKRCVLLSGTPALNKPSELYE 440
Query: 348 QLEALYPDVYKNVHEYGNRYC--KGGVFGI---YQGASNHEELHNLMKATVMIRRLKKDV 402
Q+ ++ P+++ N +E+ +RYC ++ Y G + EELH + T+MIRRLKKDV
Sbjct: 441 QVSSIIPNLF-NYNEFCDRYCYKDKNIYTRKIEYVGCKHTEELHLFLTNTIMIRRLKKDV 499
Query: 403 LAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKN---- 458
L +LP K R ++ +++ ++ +I ++LE K + + +F + N
Sbjct: 500 LKELPDKLRSKIPIEIPPNELSEILIYSKKLESKKNI--NINDLDNINLSRFNDFNSNRD 557
Query: 459 -------LINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKV 511
I++++ + AK+ A+ +Y+ +I+A KFL+F HH+ ++D I + +KK+
Sbjct: 558 NNDEENITISQLFKMTGYAKVKAIKEYITYLIDADIKFLLFCHHKLVMDEIDEFLKEKKL 617
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
IR+DG TP R+ + FQ + ++ A+LS+ A GVGL LTAA+TV+F EL W PG
Sbjct: 618 GFIRVDGLTPIDKREIYIKNFQSDEKIRIALLSITACGVGLNLTAANTVVFGELYWVPGQ 677
Query: 572 LIQAEDRAHRIGQV-SSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
+IQAEDRAHRIG +VN++YL+A +T+D++VW ++ K L L+G E+SL V
Sbjct: 678 MIQAEDRAHRIGTTHDTVNIHYLVAQNTIDEVVWKIINRKWNTLTTALNGTEDSLNV 734
>gi|328778817|ref|XP_624010.3| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Apis mellifera]
Length = 673
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 207/563 (36%), Positives = 313/563 (55%), Gaps = 39/563 (6%)
Query: 91 TYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY--NVEIENLHPLVQR 148
+Y P L+ + I +++ K + W+F L E ++ +I + NV+I L +V +
Sbjct: 89 SYFPPLIETLKTISSRSYDMKTKNWSF---HLKDYETLMEKIINFKSNVQITGLPKIVLQ 145
Query: 149 AIASASAAPDLREKYD--QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQA 206
+ + E D I + ++PFQR+G+ + + GGR ++AD+MGLGKTIQA
Sbjct: 146 IFRKNDTSINTIENIDLSDIDPKLLENIMPFQREGICYGISKGGRCMIADDMGLGKTIQA 205
Query: 207 IAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSS 266
+ +A R WP+LI+ PSS+R WA I +L P+ + +
Sbjct: 206 LGIAHYCRKNWPLLIIVPSSMRYQWAEAIYTFLPSVPTHYIYQFT--------------- 250
Query: 267 NTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKK 326
NTK I D I +YD++++ + F VI DESH LK+++ R A I+ +
Sbjct: 251 NTKDVID-DSKIVITTYDLLVRAVDTFQCKIFGFVILDESHVLKSSKTARFKAAQCIVSQ 309
Query: 327 AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG--GVFGI-YQGASNHE 383
A++ +LLSGTP LSRPIEL+ Q+ + P+ + HEYG RYC G FG + G+SN +
Sbjct: 310 ARHVVLLSGTPVLSRPIELYSQINLIMPN-FMGYHEYGIRYCAGEKTSFGWDFTGSSNMQ 368
Query: 384 ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC 443
ELH L+K T +IRRLK D+L QLP+K+R+ + L+ D+ +I LE+ K
Sbjct: 369 ELHLLLKRTCIIRRLKNDILNQLPIKKREVILLN---PDLIKIGK--EMLEISK------ 417
Query: 444 KSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
K E++V + + N + + Y +S+ AK A+ DY+ + K +IFAHH +L+AI
Sbjct: 418 KLEKKVLN-NLEKHNTLLQYYNESSIAKQKAICDYVSKLFINKQKCIIFAHHHNILNAIC 476
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
++ + IRIDG T P R+ + +FQ D AAVLS+ A G+TLTAA VIFA
Sbjct: 477 EVVESMNIKFIRIDGKTNPERRKYEIDKFQNNDSYIAAVLSITAANAGITLTAAQLVIFA 536
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
EL W PG L QAEDR HRIGQ +V + YL+A T DD +W +++ K+ L +V +
Sbjct: 537 ELFWNPGILCQAEDRVHRIGQYKNVIIQYLVAKHTADDYLWPLIQKKMNVLNEVGLDQDF 596
Query: 624 SLEVSSSQIRSSPAKQKTLDSFL 646
SL+ + +KQKTL+ F+
Sbjct: 597 SLKNIDYTTQGLNSKQKTLNFFI 619
>gi|19074332|ref|NP_585838.1| BELONGS TO THE SNF2/RAD54 HELICASE FAMILY [Encephalitozoon cuniculi
GB-M1]
gi|19068974|emb|CAD25442.1| BELONGS TO THE SNF2/RAD54 HELICASE FAMILY [Encephalitozoon cuniculi
GB-M1]
Length = 556
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 200/490 (40%), Positives = 281/490 (57%), Gaps = 62/490 (12%)
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
I S LLPFQR+GV AL GGR+++AD+MGLGKTIQA+AVA +R WP++I+ P+SL
Sbjct: 120 IYSMLLPFQREGVEHALNRGGRMIVADDMGLGKTIQALAVAYYYRAEWPLVIIAPASLLE 179
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKL 289
WA +++L + E +V+ +R ++SY+V
Sbjct: 180 DWADACRRFLGM---EAMVM-------------------RRKEDFGQEIGVVSYEVASSH 217
Query: 290 QNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQL 349
N+L + +VIADE H+LK+ Q KRT A +P+++K ALLLSGTPA+SRP+EL+ +
Sbjct: 218 ANVL-ACGAGVVIADECHYLKSLQTKRTKAIVPLLQKVSRALLLSGTPAVSRPLELYPII 276
Query: 350 EALYPDVYKNVHEYGNRYCKG---GVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQL 406
A+ ++ EYG RYC G G + Y+G SN EELH +++ +MIRR K +VL QL
Sbjct: 277 SAVDRTIFPRFAEYGARYCNGRKVGQWYDYKGCSNAEELHYVLRKFLMIRRTKDEVLGQL 336
Query: 407 PVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTD 466
P K R+QV L+ + L E + N++ + Y +
Sbjct: 337 PPKFRRQVVLECTGRQDDPRKDLVGE---------------------SVDTNVVMQ-YRE 374
Query: 467 SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQ 526
+ K+ V YL T++E G KF++F HH M++++ F ++ V IRIDG P SR
Sbjct: 375 AVGLKVDPVKQYLATMVEKGMKFVVFCHHTEMMESLEGFFAERNVPMIRIDGSVPSTSRH 434
Query: 527 ALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVS 586
LV +FQE ++V A+LS+ A GLTLTA V+FAEL W PG L+QAEDR HRIGQ S
Sbjct: 435 LLVKKFQENEEVMVALLSITACSTGLTLTAGRAVVFAELYWNPGVLLQAEDRIHRIGQKS 494
Query: 587 SVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIR-----SSPAKQKT 641
SV++ YL+A T+D+ VW + SKL L SL V S+Q++ S A QKT
Sbjct: 495 SVDIIYLVAKGTIDEYVWPKLLSKLNVL--------ESLGVGSNQLKNVGVSSQAAGQKT 546
Query: 642 LDSF-LKRCN 650
L F +KRCN
Sbjct: 547 LCQFNIKRCN 556
>gi|25395804|pir||F88481 protein C16A3.1 [imported] - Caenorhabditis elegans
Length = 866
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 220/590 (37%), Positives = 324/590 (54%), Gaps = 45/590 (7%)
Query: 72 PKLSVKFFLHTSGNIAAKF-TYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLS 130
P + VK L I +F + ++ +++P ++ +R WT + +L
Sbjct: 274 PTIGVKLKLDIGDRIKIEFYPFHSAVIDLIKQVPSRNYDPAKRSWTVASSDHITISNILK 333
Query: 131 EISGYNVEIENLHPLVQRAIASAS----AAP-DLREKYDQIPAHIESKLLPFQRDGVRFA 185
+ VE+E PL Q I + AAP DL D P+ IE +L P+Q++GV FA
Sbjct: 334 NATAVKVELE---PLPQNIIGLTNFKPKAAPSDLNTVMD--PSLIE-RLFPYQKEGVIFA 387
Query: 186 LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSE 245
L+ GRILLADEMGLGK++QA+ +A ++ WP+LI+ P+S++ W + + I
Sbjct: 388 LERDGRILLADEMGLGKSVQALTIARYYKADWPLLIVCPASVKGAWKKQLNTFFPIIHRI 447
Query: 246 IVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADE 305
+V S+ + +SNT I+SY+ ++ +IL ++ +I DE
Sbjct: 448 FIV-----DKSSDPLPDVCTSNT---------VAIMSYEQMVLKHDILKKEKYRTIIFDE 493
Query: 306 SHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGN 365
SH LK+ +A+RT + K A + +LLSGTPALSRP ELF Q+ + ++ N HE+
Sbjct: 494 SHMLKDGKARRTKVATDLSKVALHVILLSGTPALSRPSELFTQIRLIDHKLFTNFHEFAI 553
Query: 366 RYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKD 422
RYC G G F +G +N EEL +M +MIRRLK DVL LP KRR+ V++ D
Sbjct: 554 RYCDGKQGRFCFEAKGCTNSEELAAIMFKRLMIRRLKADVLKDLPEKRREVVYVSGPTID 613
Query: 423 MRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDY-LET 481
R +L+ KA E+V S++ ++L+ + Y+ + K AV ++ LE
Sbjct: 614 AR-----MDDLQ------KARADYEKVNSMERKHESLL-EFYSLTGIVKAAAVCEHILEN 661
Query: 482 VIEAGC---KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDV 538
K LIFAHHQ +LD I K+K+ IRIDG TP R AL FQ D++
Sbjct: 662 YFYPDAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCDSFQTDDNI 721
Query: 539 KAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
+ AVLS+ A GVG+TLTAAS V+FAE+ + PG L+QAEDRAHR+GQ SV V YL+A T
Sbjct: 722 RVAVLSITAAGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKT 781
Query: 599 VDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKR 648
DD++W++V+ KL+ LGQV + +R + A Q + +LK+
Sbjct: 782 ADDVMWNMVQQKLDVLGQVSLSSDTFRTADKMHLRFNDAAQPGIAEYLKK 831
>gi|443705177|gb|ELU01833.1| hypothetical protein CAPTEDRAFT_109109 [Capitella teleta]
Length = 568
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 213/559 (38%), Positives = 306/559 (54%), Gaps = 47/559 (8%)
Query: 69 EQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKV 128
++V LS K L A +Y LV F+ + ++ + WTF +
Sbjct: 2 QRVNCLSGKCVLVRRDRFAVDVSYSAPLVQLFKSMQTGQYDPATKRWTFDLSEYHDLVPG 61
Query: 129 LSEISGYNVEIENLHPLV----QRAIASASAAPDLREKYD--QIPAHIESKLLPFQRDGV 182
LS +S IE L V + ++ P+ + D I A + LLPFQR +
Sbjct: 62 LSALSN-AARIEGLPRGVLLTFDDVVHGRTSTPNFIPEVDLSCIDAPLAETLLPFQRHAI 120
Query: 183 RFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NI 241
F + GR+L+AD+MGLGK++QA+A+A +R WP+L++ PSS+R W + +WL ++
Sbjct: 121 NFGVYRNGRLLIADDMGLGKSLQALALAAYYRSEWPLLVVCPSSVRFAWREHVLKWLPSV 180
Query: 242 PPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
P I VV+S R+ G NIISYD++ + + FK+V
Sbjct: 181 EPQYINVVVS-----------------GRDPLTSGKVNIISYDLMAR--RVKDMDAFKVV 221
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
I DESHFLKN +A RT A + ++K A+ +LLSGTPALSRP ELF Q+ ++ V+
Sbjct: 222 IMDESHFLKNIKAVRTQAAVTLLKAARRVILLSGTPALSRPQELFTQISSVDHKVFPRFM 281
Query: 362 EYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDV 418
EYG RYC K +G Y G+SN EL +++ +MIRRLKKDV++QLP K R V LD
Sbjct: 282 EYGLRYCDAKKTQWGWDYSGSSNLHELQLVLEERIMIRRLKKDVMSQLPAKFRTMVVLDP 341
Query: 419 AE-KDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLD 477
K R I A +E ++ G + ++ + + + ++A K AV +
Sbjct: 342 GSLKRSRDIKASQKEFDIATGSDR---------------RSALLQYFHETASVKSKAVTE 386
Query: 478 YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD 537
Y+ ++EA K L+FAHH+ +LDA+ KK + IRIDG T +R L FQ D
Sbjct: 387 YIMDLLEADRKLLVFAHHREVLDALENAVSKKHEY-IRIDGRTSSEARDGLANNFQTNDS 445
Query: 538 VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAND 597
V+ A+LS+ A GL LTAA+ V+FAEL W PG L QAEDR HRIGQ SV V YL+A D
Sbjct: 446 VRVAILSITAANAGLHLTAANLVVFAELFWNPGILAQAEDRVHRIGQEDSVTVQYLVAKD 505
Query: 598 TVDDIVWDVVRSKLENLGQ 616
T DD +W ++++KL+ L +
Sbjct: 506 TADDSLWPLIQNKLDVLNK 524
>gi|449329397|gb|AGE95669.1| SNF2/rad54 helicase family protein [Encephalitozoon cuniculi]
Length = 556
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 200/490 (40%), Positives = 285/490 (58%), Gaps = 62/490 (12%)
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
I S LLPFQR+GV AL GGR+++AD+MGLGKTIQA+AVA +R WP++I+ P+SL
Sbjct: 120 IYSMLLPFQREGVEHALNRGGRMIVADDMGLGKTIQALAVAYYYRAEWPLVIIAPASLLE 179
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKL 289
WA +++L + E +V+ +R ++SY+V
Sbjct: 180 DWADACRRFLGM---EAMVM-------------------RRKEDFGQEIGVVSYEVASSH 217
Query: 290 QNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQL 349
N+L + +VIADE H+LK+ Q KRT A +P+++K ALLLSGTPA+SRP+EL+ +
Sbjct: 218 ANVL-ACGAGVVIADECHYLKSLQTKRTKAIVPLLQKVSRALLLSGTPAVSRPLELYPII 276
Query: 350 EALYPDVYKNVHEYGNRYCKG---GVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQL 406
A+ ++ EYG RYC G G + Y+G SN EELH +++ +MIRR K +VL QL
Sbjct: 277 SAVDRTIFPRFAEYGARYCNGRKVGQWYDYKGCSNAEELHYVLRKFLMIRRTKDEVLGQL 336
Query: 407 PVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTD 466
P K R+QV L+ G+ + + +S+ + N++ + Y +
Sbjct: 337 PPKFRRQVVLECT------------------GRQDDPRKDLVGESV---DTNVVMQ-YRE 374
Query: 467 SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQ 526
+ K+ V YL T++E G KF++F HH M++++ F ++ V IRIDG P SR
Sbjct: 375 AVGLKVDPVKQYLATMVEKGMKFVVFCHHTEMMESLEGFFAERNVPMIRIDGSVPSTSRH 434
Query: 527 ALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVS 586
LV +FQE ++V A+LS+ A GLTLTA V+FAEL W PG L+QAEDR HRIGQ S
Sbjct: 435 LLVKKFQENEEVMVALLSITACSTGLTLTAGRAVVFAELYWNPGVLLQAEDRIHRIGQKS 494
Query: 587 SVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIR-----SSPAKQKT 641
SV++ YL+A T+D+ VW + SKL L SL V S+Q++ S A QKT
Sbjct: 495 SVDIIYLVAKGTIDEYVWPKLLSKLNVL--------ESLGVGSNQLKNVGVSSQAAGQKT 546
Query: 642 LDSF-LKRCN 650
L F +KRCN
Sbjct: 547 LYQFNIKRCN 556
>gi|25148958|ref|NP_498401.2| Protein C16A3.1, isoform b [Caenorhabditis elegans]
gi|351047540|emb|CCD63220.1| Protein C16A3.1, isoform b [Caenorhabditis elegans]
Length = 686
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 220/590 (37%), Positives = 323/590 (54%), Gaps = 45/590 (7%)
Query: 72 PKLSVKFFLHTSGNIAAKF-TYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLS 130
P + VK L I +F + ++ +++P ++ +R WT + +L
Sbjct: 94 PTIGVKLKLDIGDRIKIEFYPFHSAVIDLIKQVPSRNYDPAKRSWTVASSDHITISNILK 153
Query: 131 EISGYNVEIENLHPLVQRAIA----SASAAP-DLREKYDQIPAHIESKLLPFQRDGVRFA 185
+ VE+E PL Q I AAP DL D P+ IE +L P+Q++GV FA
Sbjct: 154 NATAVKVELE---PLPQNIIGLTNFKPKAAPSDLNTVMD--PSLIE-RLFPYQKEGVIFA 207
Query: 186 LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSE 245
L+ GRILLADEMGLGK++QA+ +A ++ WP+LI+ P+S++ W + + I
Sbjct: 208 LERDGRILLADEMGLGKSVQALTIARYYKADWPLLIVCPASVKGAWKKQLNTFFPIIHRI 267
Query: 246 IVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADE 305
+V S+ + +SNT I+SY+ ++ +IL ++ +I DE
Sbjct: 268 FIV-----DKSSDPLPDVCTSNT---------VAIMSYEQMVLKHDILKKEKYRTIIFDE 313
Query: 306 SHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGN 365
SH LK+ +A+RT + K A + +LLSGTPALSRP ELF Q+ + ++ N HE+
Sbjct: 314 SHMLKDGKARRTKVATDLSKVALHVILLSGTPALSRPSELFTQIRLIDHKLFTNFHEFAI 373
Query: 366 RYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKD 422
RYC G G F +G +N EEL +M +MIRRLK DVL LP KRR+ V++ D
Sbjct: 374 RYCDGKQGRFCFEAKGCTNSEELAAIMFKRLMIRRLKADVLKDLPEKRREVVYVSGPTID 433
Query: 423 MRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDY-LET 481
R +L+ KA E+V S++ ++L+ + Y+ + K AV ++ LE
Sbjct: 434 AR-----MDDLQ------KARADYEKVNSMERKHESLL-EFYSLTGIVKAAAVCEHILEN 481
Query: 482 VIEAGC---KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDV 538
K LIFAHHQ +LD I K+K+ IRIDG TP R AL FQ D++
Sbjct: 482 YFYPDAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCDSFQTDDNI 541
Query: 539 KAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
+ AVLS+ A GVG+TLTAAS V+FAE+ + PG L+QAEDRAHR+GQ SV V YL+A T
Sbjct: 542 RVAVLSITAAGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKT 601
Query: 599 VDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKR 648
DD++W++V+ KL+ LGQV + +R + A Q + +LK+
Sbjct: 602 ADDVMWNMVQQKLDVLGQVSLSSDTFRTADKMHLRFNDAAQPGIAEYLKK 651
>gi|17552194|ref|NP_498400.1| Protein C16A3.1, isoform a [Caenorhabditis elegans]
gi|351047539|emb|CCD63219.1| Protein C16A3.1, isoform a [Caenorhabditis elegans]
Length = 687
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 220/590 (37%), Positives = 323/590 (54%), Gaps = 45/590 (7%)
Query: 72 PKLSVKFFLHTSGNIAAKF-TYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLS 130
P + VK L I +F + ++ +++P ++ +R WT + +L
Sbjct: 95 PTIGVKLKLDIGDRIKIEFYPFHSAVIDLIKQVPSRNYDPAKRSWTVASSDHITISNILK 154
Query: 131 EISGYNVEIENLHPLVQRAIA----SASAAP-DLREKYDQIPAHIESKLLPFQRDGVRFA 185
+ VE+E PL Q I AAP DL D P+ IE +L P+Q++GV FA
Sbjct: 155 NATAVKVELE---PLPQNIIGLTNFKPKAAPSDLNTVMD--PSLIE-RLFPYQKEGVIFA 208
Query: 186 LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSE 245
L+ GRILLADEMGLGK++QA+ +A ++ WP+LI+ P+S++ W + + I
Sbjct: 209 LERDGRILLADEMGLGKSVQALTIARYYKADWPLLIVCPASVKGAWKKQLNTFFPIIHRI 268
Query: 246 IVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADE 305
+V S+ + +SNT I+SY+ ++ +IL ++ +I DE
Sbjct: 269 FIV-----DKSSDPLPDVCTSNT---------VAIMSYEQMVLKHDILKKEKYRTIIFDE 314
Query: 306 SHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGN 365
SH LK+ +A+RT + K A + +LLSGTPALSRP ELF Q+ + ++ N HE+
Sbjct: 315 SHMLKDGKARRTKVATDLSKVALHVILLSGTPALSRPSELFTQIRLIDHKLFTNFHEFAI 374
Query: 366 RYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKD 422
RYC G G F +G +N EEL +M +MIRRLK DVL LP KRR+ V++ D
Sbjct: 375 RYCDGKQGRFCFEAKGCTNSEELAAIMFKRLMIRRLKADVLKDLPEKRREVVYVSGPTID 434
Query: 423 MRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDY-LET 481
R +L+ KA E+V S++ ++L+ + Y+ + K AV ++ LE
Sbjct: 435 AR-----MDDLQ------KARADYEKVNSMERKHESLL-EFYSLTGIVKAAAVCEHILEN 482
Query: 482 VIEAGC---KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDV 538
K LIFAHHQ +LD I K+K+ IRIDG TP R AL FQ D++
Sbjct: 483 YFYPDAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCDSFQTDDNI 542
Query: 539 KAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
+ AVLS+ A GVG+TLTAAS V+FAE+ + PG L+QAEDRAHR+GQ SV V YL+A T
Sbjct: 543 RVAVLSITAAGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKT 602
Query: 599 VDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKR 648
DD++W++V+ KL+ LGQV + +R + A Q + +LK+
Sbjct: 603 ADDVMWNMVQQKLDVLGQVSLSSDTFRTADKMHLRFNDAAQPGIAEYLKK 652
>gi|25148960|ref|NP_741192.1| Protein C16A3.1, isoform c [Caenorhabditis elegans]
gi|60390949|sp|Q8MNV7.1|SMAL1_CAEEL RecName: Full=Putative SMARCAL1-like protein
gi|351047541|emb|CCD63221.1| Protein C16A3.1, isoform c [Caenorhabditis elegans]
Length = 690
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 220/590 (37%), Positives = 323/590 (54%), Gaps = 45/590 (7%)
Query: 72 PKLSVKFFLHTSGNIAAKF-TYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLS 130
P + VK L I +F + ++ +++P ++ +R WT + +L
Sbjct: 98 PTIGVKLKLDIGDRIKIEFYPFHSAVIDLIKQVPSRNYDPAKRSWTVASSDHITISNILK 157
Query: 131 EISGYNVEIENLHPLVQRAIA----SASAAP-DLREKYDQIPAHIESKLLPFQRDGVRFA 185
+ VE+E PL Q I AAP DL D P+ IE +L P+Q++GV FA
Sbjct: 158 NATAVKVELE---PLPQNIIGLTNFKPKAAPSDLNTVMD--PSLIE-RLFPYQKEGVIFA 211
Query: 186 LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSE 245
L+ GRILLADEMGLGK++QA+ +A ++ WP+LI+ P+S++ W + + I
Sbjct: 212 LERDGRILLADEMGLGKSVQALTIARYYKADWPLLIVCPASVKGAWKKQLNTFFPIIHRI 271
Query: 246 IVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADE 305
+V S+ + +SNT I+SY+ ++ +IL ++ +I DE
Sbjct: 272 FIV-----DKSSDPLPDVCTSNT---------VAIMSYEQMVLKHDILKKEKYRTIIFDE 317
Query: 306 SHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGN 365
SH LK+ +A+RT + K A + +LLSGTPALSRP ELF Q+ + ++ N HE+
Sbjct: 318 SHMLKDGKARRTKVATDLSKVALHVILLSGTPALSRPSELFTQIRLIDHKLFTNFHEFAI 377
Query: 366 RYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKD 422
RYC G G F +G +N EEL +M +MIRRLK DVL LP KRR+ V++ D
Sbjct: 378 RYCDGKQGRFCFEAKGCTNSEELAAIMFKRLMIRRLKADVLKDLPEKRREVVYVSGPTID 437
Query: 423 MRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDY-LET 481
R +L+ KA E+V S++ ++L+ + Y+ + K AV ++ LE
Sbjct: 438 AR-----MDDLQ------KARADYEKVNSMERKHESLL-EFYSLTGIVKAAAVCEHILEN 485
Query: 482 VIEAGC---KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDV 538
K LIFAHHQ +LD I K+K+ IRIDG TP R AL FQ D++
Sbjct: 486 YFYPDAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCDSFQTDDNI 545
Query: 539 KAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
+ AVLS+ A GVG+TLTAAS V+FAE+ + PG L+QAEDRAHR+GQ SV V YL+A T
Sbjct: 546 RVAVLSITAAGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKT 605
Query: 599 VDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKR 648
DD++W++V+ KL+ LGQV + +R + A Q + +LK+
Sbjct: 606 ADDVMWNMVQQKLDVLGQVSLSSDTFRTADKMHLRFNDAAQPGIAEYLKK 655
>gi|449675654|ref|XP_002156270.2| PREDICTED: DNA annealing helicase and endonuclease ZRANB3-like
[Hydra magnipapillata]
Length = 921
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 193/473 (40%), Positives = 283/473 (59%), Gaps = 30/473 (6%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
+P I L FQ+ G+RF ++ GR+L+ DEMGLGKT+QAIA+A F + WP+LI+ PS
Sbjct: 13 LPKQIRRSLTNFQKKGIRFGIKMKGRVLIGDEMGLGKTLQAIAIAYYFYEKWPLLIIAPS 72
Query: 226 SLRLHWAAMIQQWLN-IPPSEIVVVLS--QLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
SLR +W ++ WL + P +I ++ S L + TI+S GL +I
Sbjct: 73 SLRYNWVNELEDWLPFLLPGDINMIRSFADLSQMFVAKVTIISY---------GLISISH 123
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
K+ +++ SNF +VI DESHFLK+ + RT L +K+ + +LLSGTP+LSRP
Sbjct: 124 SHKNAKVSDLIAKSNFGVVIVDESHFLKSMKTVRTKVILNSLKRIPHVILLSGTPSLSRP 183
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYC---------KGG-VFGIYQ--GASNHEELHNLMK 390
EL+ QL L+P + N H++G R+C +GG +F +Q GASN E+L+ L++
Sbjct: 184 EELYPQLHLLHPTKFNNFHDFGERFCGGYFETVRGRGGQIFNSFQTRGASNLEDLNRLLR 243
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAE--KDMRQIYALFRELEVVKGKIKACKSEEE 448
VMIRRLK +VL +LP KRR ++F ++ E K + I F+++ V ++K SE+
Sbjct: 244 -NVMIRRLKNEVLTELPSKRRSKIFFEIPESNKYKKSIDEQFKQIRKVLKQLK--NSEDG 300
Query: 449 VQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAG-CKFLIFAHHQPMLDAIHQLFL 507
F N+++ D+A AK AV Y+ +I+ KFL+F H M+ AI + +
Sbjct: 301 FFLSAFDYNQPFNQLFCDTALAKAGAVQKYICDLIDGMPNKFLVFCFHMTMVQAIQETLV 360
Query: 508 KKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSW 567
+KKV I I G PP R LV FQ + + A+LS++A GLTLTAA V+FAEL
Sbjct: 361 QKKVKYICITGSVPPVQRGHLVETFQSNKEYRVAILSIQAASTGLTLTAADHVVFAELHH 420
Query: 568 TPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
TPG L+QAEDR HRIGQ ++V ++YLLA T+DDI+W +++ K+ L+G
Sbjct: 421 TPGVLLQAEDRCHRIGQKNAVQIHYLLAQGTIDDILWTMLQRKVMVTTAALNG 473
>gi|395527741|ref|XP_003765998.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1
[Sarcophilus harrisii]
Length = 911
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 193/478 (40%), Positives = 281/478 (58%), Gaps = 36/478 (7%)
Query: 184 FALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIP 242
FA+ HGGR+LLAD+MGLGKTIQAI +A +R WP+L++TPSS+R W WL ++
Sbjct: 411 FAISHGGRLLLADDMGLGKTIQAICIAAYYRKEWPLLVVTPSSVRFTWEQAFHHWLPSLS 470
Query: 243 PSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVI 302
P VV T ++ GL NI+S+D++ +L+ L +S F+++I
Sbjct: 471 PDSTNVV-----------------ETGKDSLTAGLINIVSFDLLSRLKKQLKTS-FQVII 512
Query: 303 ADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHE 362
DESHFLKN + R A LP++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H+
Sbjct: 513 IDESHFLKNVKTARCQAALPLLKAAKRVILLSGTPAMSRPAELYTQIVAVKPHFFPQFHD 572
Query: 363 YGNRYCKGGVFGI---YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
+G RYC Y G+SN EL L++ TVM+RRLK VL+QLP K+R+ V +
Sbjct: 573 FGLRYCDAKKLPWGWDYSGSSNLGELRILLEETVMLRRLKSSVLSQLPAKQRKMVVVAPG 632
Query: 420 EKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYL 479
+ D + L + + + K+ + ++E L F +AEAK+ +Y+
Sbjct: 633 QMDAKSRAVLAAAAKEMTTEKKSKRQQKEALILFFNR----------TAEAKVQPATEYI 682
Query: 480 ETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDV 538
++E+G K L+FAHH+ +LDAI KK ++ IRIDG T A RQAL FQ +
Sbjct: 683 MDLLESGREKLLVFAHHKLVLDAICCNLEKKHINYIRIDGATSSADRQALCQLFQLSEKY 742
Query: 539 KAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
AVLS+ A +GLT +AA V+FAEL W PG LIQAEDR HRIGQ +SV+++YL+A T
Sbjct: 743 PVAVLSITAANMGLTFSAADLVVFAELFWNPGILIQAEDRVHRIGQSNSVSIHYLVAKGT 802
Query: 599 VDDIVWDVVRSKLENLGQ--VLDGHENSLEVSSSQIRSSPAKQKTLDSFLKRCNNVDD 654
DD +W +++ K++ LGQ + D + + + ++ P KQK + L+ DD
Sbjct: 803 ADDYLWPLIQEKIKVLGQAGLSDTNFSDMTEATDYFHKDP-KQKKIYDLLRSSLEEDD 859
>gi|340711952|ref|XP_003394530.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Bombus terrestris]
Length = 703
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 212/580 (36%), Positives = 312/580 (53%), Gaps = 54/580 (9%)
Query: 77 KFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY- 135
+F L TS +Y P LV A +K+ ++ K + W F L E V+ ++ +
Sbjct: 118 RFVLETS-------SYLPPLVEAIKKVTSRLYDIKTKQWNF---LLKDYEAVMEKVINFK 167
Query: 136 -NVEIENL-HPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRIL 193
+++I L P++Q ++ I + L+PFQR+GV + + GGR +
Sbjct: 168 SDIQITGLPKPILQIFRKDDTSMNTENINLLDIDPQLVKNLMPFQREGVCYGISKGGRCM 227
Query: 194 LADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQL 253
+AD+MGLGKTIQA+ +A FR WP+LI+TP+S+R WA I +L P+ + +
Sbjct: 228 IADDMGLGKTIQALGIAHYFRKNWPLLIVTPASVRYQWAEAIYTFLPSVPAHYIHQFA-- 285
Query: 254 GGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQ 313
NTK I + I +YD++ + + F VI DESH LK+ +
Sbjct: 286 -------------NTKDCIDGSKIV-ITTYDLLARAMDTFERQIFGFVILDESHALKSVK 331
Query: 314 AKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG--G 371
R A ++ +A + +LLSGTPALSRP+EL+ Q+ + P+ + EYG RYC G
Sbjct: 332 TARFKAAQCVVLQACHVVLLSGTPALSRPMELYSQINLIMPN-FMGYQEYGIRYCAGEKT 390
Query: 372 VFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLD-----VAEKDMRQ 425
+G + G+SN +EL L++ T +IRRLK DVL QLP K+R+ + LD V K+M +
Sbjct: 391 SYGWDFSGSSNMQELQLLLRRTCVIRRLKNDVLNQLPAKKREVIILDPGLIKVGTKEMVE 450
Query: 426 IYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA 485
I E EV+ G E L++ Y +S AK A+ DY+ +
Sbjct: 451 ISKKL-EREVLNG------VERHHTLLQY---------YNESGVAKQKAICDYISKLFMK 494
Query: 486 GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSM 545
KF+IFAHHQ ++DAI + + IRIDG T P R+ + +FQ DD AVLS+
Sbjct: 495 KQKFIIFAHHQNVMDAICDVAESMDIKYIRIDGKTNPERRKYQIDQFQNCDDCMVAVLSI 554
Query: 546 KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWD 605
A G+TLTAA +FAEL W PG L QAEDR HRIGQ +SV + YL+A T DD +W
Sbjct: 555 TAANAGITLTAAKLAVFAELFWNPGILCQAEDRVHRIGQDNSVIIQYLVAKQTADDYLWP 614
Query: 606 VVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSF 645
+++ K+ L +V SL+ +++ ++QKTLDSF
Sbjct: 615 LIQKKMNVLNEVGLDQNFSLKDIDVTVQAFRSEQKTLDSF 654
>gi|383861210|ref|XP_003706079.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Megachile rotundata]
Length = 675
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 230/672 (34%), Positives = 348/672 (51%), Gaps = 60/672 (8%)
Query: 9 FSAEELDFLEREALQQI--AQRHSKPFSDSPSYKVEALPQGSRTLPLSVAPAPKGSLGDF 66
+S E+++ ALQ+ AQ S PFS S + ++P + + +
Sbjct: 3 YSEEQIEQKRLLALQRKKQAQVKSNPFSSSTTRN--SIPSTNSNVSFNKNKETNKRFSPI 60
Query: 67 SKE----QVPKLSVKFFLHTSGNIAAKFT-YDPVLVSAFRKIPKATWNAKERLWTFPVPF 121
S Q ++ K ++ T A + + Y P L+ A + IP +++ K + W F
Sbjct: 61 STRNFFGQKSCITGKCYMITHERFALETSAYFPPLIEALKLIPSRSYDMKSKTWNFN--- 117
Query: 122 LSSAEKVLSEISGYNVEIE--NLHPLVQRAIASASAAPDLREKYD--QIPAHIESKLLPF 177
L E V+ +I + +I+ L +V + + ++ E D +I + S L+PF
Sbjct: 118 LKDYETVMEKIINFKTDIQVIGLPKIVIELFRKNNNSENIDENIDLSKIDPQLLSSLMPF 177
Query: 178 QRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQ 237
QR G+ + + GR ++AD+MGLGKTIQA+ +A F++ WP+LI+ PSS+R W I
Sbjct: 178 QRKGICYGISKRGRCMIADDMGLGKTIQALGIAHYFKENWPLLIIVPSSVRYQWTDAIYT 237
Query: 238 WLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSN 297
+L P++ V + NTK I + + I SYD++++ +
Sbjct: 238 FLPSVPAQYVHQFA---------------NTKDFITGNKIV-ITSYDLLVRAVDAFERHT 281
Query: 298 FKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVY 357
F VI DESH LK+ + R A I+ KA + +LLSGTPALSRPIEL+ Q+ + + +
Sbjct: 282 FGFVILDESHALKSVKTARYKAAQRIVSKACHVVLLSGTPALSRPIELYSQISLIMRN-F 340
Query: 358 KNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQV 414
EYG RYC G FG + G+SN +EL L+K T +IRRLK +VL +LP K+R+ +
Sbjct: 341 MGYQEYGIRYCAGEKSSFGWDFTGSSNMQELQLLLKCTCVIRRLKNEVLEELPSKKREVI 400
Query: 415 FLD-----VAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEK-NLINKIYTDSA 468
LD + K+M++I A E SL E+ N + + Y +S+
Sbjct: 401 VLDPDLIKIGTKEMKEISAKL-----------------ERSSLTGMERHNTLLQYYNESS 443
Query: 469 EAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQAL 528
AK A+ DY+ ++ K +IFAHHQ +LDAI ++ + IRIDG T P R+
Sbjct: 444 IAKQKAICDYVTNLLRRKQKCIIFAHHQNILDAISEVAESMDIKYIRIDGKTNPERRKYQ 503
Query: 529 VTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSV 588
V +FQ D A+LS+ A G+TLTAA V+FAEL W PG L QAEDR HRIGQ +V
Sbjct: 504 VDKFQTSDAYLVAILSITAANAGITLTAAQLVVFAELFWNPGVLCQAEDRVHRIGQNENV 563
Query: 589 NVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDS-FLK 647
+ YL+A T DD +W +++ K+ L +V + L+ ++ KQ+TLD F K
Sbjct: 564 VIQYLVAKQTADDYLWPLIQRKMNVLNEVGLDQDFCLKDVDVTKQTLNEKQRTLDFLFNK 623
Query: 648 RCNNVDDSEHQQ 659
C D E Q
Sbjct: 624 DCKFETDEETIQ 635
>gi|402892027|ref|XP_003909225.1| PREDICTED: zinc finger Ran-binding domain-containing protein
3-like, partial [Papio anubis]
Length = 512
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 190/474 (40%), Positives = 286/474 (60%), Gaps = 34/474 (7%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAI +A +++ WP+LI+
Sbjct: 27 DFLPDRLRAKLLPFQKDGIIFALKRNGRCMVADEMGLGKTIQAIGIAYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I++W+ + P EI V+ N++ +S+ +K + GL +
Sbjct: 87 PSSLRYPWTEEIEKWIPELSPEEINVI------QNKTDVRRIST-SKVTVLGYGLLTADA 139
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
++ L N NFK+VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL RP
Sbjct: 140 ETLIDALNN----QNFKVVIVDESHYMKSRNATRSRILLPVVQKARRAILLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGG----VFGIY-----QGASNHEELHNLMKATV 393
E+ L++LY ++ + + + + FG +GASN ELH L+ + +
Sbjct: 196 EEV---LQSLYSELKRREGRWADHEARWADHLRYFGKRPQWDCRGASNLNELHQLL-SDI 251
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL QLP K RQ++ D+ +++ F E E + + E
Sbjct: 252 MIRRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAME------- 304
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 305 -TVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTR 363
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDGG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG +
Sbjct: 364 YIRIDGGVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHI 423
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 424 KQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQ 477
>gi|355720705|gb|AES07019.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a-like 1 [Mustela putorius furo]
Length = 574
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 203/481 (42%), Positives = 285/481 (59%), Gaps = 35/481 (7%)
Query: 172 SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHW 231
S LLPFQR GV FA+ GR+LLAD+MGLGKTIQAI +A +R WP+L++ PSS+R W
Sbjct: 55 SNLLPFQRAGVNFAIAKRGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTW 114
Query: 232 AAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQ 290
QWL ++ P I VV++ G +R GL NI+S+D++ KL+
Sbjct: 115 EQAFLQWLPSLSPDCINVVVT---GKDRLT--------------AGLVNIVSFDLLSKLE 157
Query: 291 NILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLE 350
L + FK+VI DESHFLKN + R A +P++K A+ +LLSGTPA+SRP EL+ Q+
Sbjct: 158 KQL-KTPFKVVIIDESHFLKNIKTARCRAAMPLLKVAKRVILLSGTPAMSRPAELYTQII 216
Query: 351 ALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLP 407
+ P + H +G RYC K +G Y G+SN EL L++ VM+RRLK DVLAQLP
Sbjct: 217 GVRPTFFPQFHAFGLRYCDAKRHPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLAQLP 276
Query: 408 VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDS 467
K+R+ V + + AL + + K + ++E L F +
Sbjct: 277 PKQRKMVVVAPGRISTKARAALDAAAKEMTTTDKTKRQQKEALLLFFNR----------T 326
Query: 468 AEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQ 526
AEAKIP+V++Y+ ++E+G KFL+FAHH+ +L AI +K V IRIDG T A R+
Sbjct: 327 AEAKIPSVIEYILDLLESGREKFLVFAHHRIVLSAITTELERKHVPHIRIDGSTSSADRE 386
Query: 527 ALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVS 586
L +FQ + AVLS+ A +GLT T+A V+FAEL W PG L+QAEDR HRIGQ S
Sbjct: 387 DLCQQFQLFEKHAVAVLSITAANMGLTFTSADLVVFAELFWNPGVLLQAEDRVHRIGQSS 446
Query: 587 SVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS--SSQIRSSPAKQKTLDS 644
SV+++YL+A T DD +W +++ K++ LG+ N E + ++ P +Q D
Sbjct: 447 SVSIHYLVARGTADDYLWPLIQEKIKVLGEAGLSETNFSETTEATNYFYKDPKQQTIYDL 506
Query: 645 F 645
F
Sbjct: 507 F 507
>gi|12043930|gb|AAG47648.1| HepA-related protein HARP [Mus musculus]
Length = 900
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 210/581 (36%), Positives = 319/581 (54%), Gaps = 56/581 (9%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLVQRAI 150
Y ++ F+++ +++ K R W+F L K+++ V+++ L V A
Sbjct: 308 YSEAVIGLFKQMESRSYDIKTRKWSF---LLEEHNKLIARSRELKQVQLDPLPKTVTLAF 364
Query: 151 AS--ASAAPDLREKYDQ-----IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKT 203
AS +P L+ + + A + S L+PFQR+GV FA+ GR+LLAD+MGLGKT
Sbjct: 365 ASQLEKTSPKLKADVPEADLSGVDAKLVSSLMPFQREGVSFAISKRGRLLLADDMGLGKT 424
Query: 204 IQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFT 262
+QAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G
Sbjct: 425 VQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPENINVVVTGKGRLTA---- 480
Query: 263 IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLP 322
GL NI+S+D++ KL+ L + FK+VI DESHFLKN + R A +P
Sbjct: 481 -------------GLVNIVSFDLLCKLERQLKTP-FKVVIIDESHFLKNIKTARCRAAVP 526
Query: 323 IIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI---YQGA 379
I+K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC Y G+
Sbjct: 527 ILKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRLPWGWDYSGS 586
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL-EVVKG 438
SN EL L++ +M+RRLK DVL+QLP K+R+ V ++ R AL E+ K
Sbjct: 587 SNLGELKLLLEEAIMLRRLKSDVLSQLPAKQRKMVVVNPGRISSRAKAALDAAAKEMTKD 646
Query: 439 KIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQP 497
K K +K + + +AEAKIP V++Y+ ++++G KFL+FAHH+
Sbjct: 647 KTKQ------------QQKEALLVFFNRTAEAKIPCVVEYILDLLDSGREKFLVFAHHKV 694
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
+LDA+ + +K V IRIDG FQ A+LS+ A +GLT + A
Sbjct: 695 ILDAVAKELERKNVQHIRIDGS---------CQRFQLSKGHTVALLSITAANMGLTFSTA 745
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
V+FAEL W PG LIQAEDR HRIGQ +SV+++YL+A T DD +W +++ K++ LG+
Sbjct: 746 DLVVFAELFWNPGVLIQAEDRVHRIGQTNSVSIHYLVAKGTADDYLWPLIQEKIKVLGEA 805
Query: 618 LDGHENSLEVSSSQIRSSPAKQKTLDSFLKRCNNVDDSEHQ 658
N E++ + KQKT+ ++ D ++ +
Sbjct: 806 GLSETNFSEMTEATDYVHKPKQKTIYDLFQQSFEDDGNDME 846
>gi|301608898|ref|XP_002934016.1| PREDICTED: zinc finger Ran-binding domain-containing protein
3-like, partial [Xenopus (Silurana) tropicalis]
Length = 489
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 195/504 (38%), Positives = 291/504 (57%), Gaps = 53/504 (10%)
Query: 144 PLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKT 203
P V + S+A D+ + +P + +LLPFQR+GV FAL+ GR ++ADEMGLGKT
Sbjct: 2 PSVGERCKNVSSALDVDSQLSYLPDKLRERLLPFQREGVCFALKRHGRCMIADEMGLGKT 61
Query: 204 IQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFT 262
+QAIAVA +R+ WP+LI+ PSSLR W +++W+ + P +I V+ ++ T
Sbjct: 62 LQAIAVAYYYRNEWPLLIVVPSSLRYPWIEEMEKWIPELCPEDITVIENK---------T 112
Query: 263 IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLP 322
V + + + G + +++ D L + L +F++V+ DESH++K+ A R+ LP
Sbjct: 113 DVGRMSACKVTVLG-YGLLTTDAQ-TLIDALYKQHFRVVLVDESHYMKSRNASRSKLLLP 170
Query: 323 IIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV---------- 372
I++KA ALLL+GTPAL RP EL+ Q++AL+P + EY +YC V
Sbjct: 171 IVQKAARALLLTGTPALGRPEELYMQIDALFPKKFGTWTEYAKKYCNAHVSYPPCTFVTE 230
Query: 373 ------------------FGI-----YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVK 409
FG Y+GASN +ELH + +MIRRLK +VL QLP K
Sbjct: 231 CGKAPEDSCLSQQLPLMYFGNRTQWDYRGASNLDELHQRL-GNIMIRRLKNEVLTQLPPK 289
Query: 410 RRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK-FTE-KNLINKIYTDS 467
RQ++ D+ + +++ E E K+ C +S FT+ LI +++ +
Sbjct: 290 IRQRIPFDLPKDVAKEMNGSIEEWE----KLMRCPDSMAAESSNPFTQIMGLITRMFKQT 345
Query: 468 AEAKIPAVLDYLETVIEAG-CKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQ 526
A AK AV DY++ ++E KFL+FAHH ML A + ++ K IRIDG P + R
Sbjct: 346 ALAKAGAVKDYIKMMLENDKLKFLVFAHHLSMLQACTEAAIESKARYIRIDGSVPSSERI 405
Query: 527 ALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVS 586
LV +FQ + + A+LS++A G GLT TAA+ V+FAEL W PG + QAEDRAHRIGQ S
Sbjct: 406 HLVHQFQNDPETRVAILSIQAAGQGLTFTAATHVVFAELYWDPGHIKQAEDRAHRIGQCS 465
Query: 587 SVNVYYLLANDTVDDIVWDVVRSK 610
SV+++YL+A T+D ++W ++ K
Sbjct: 466 SVHIHYLIARGTMDTLMWGMLNRK 489
>gi|307209215|gb|EFN86322.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Harpegnathos
saltator]
Length = 670
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 210/584 (35%), Positives = 320/584 (54%), Gaps = 61/584 (10%)
Query: 77 KFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYN 136
+F L TS I P ++ F+ +P ++ K R+W F + + E ++ ++ +
Sbjct: 83 RFALETSSFI-------PAIIETFKTVPSRLYDPKSRIWNFHI---NDYENLMQKLIRHE 132
Query: 137 VEI------ENLHPLVQRAIAS--ASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQH 188
++I E + + +R + ++ PDL +I + L+PFQ+DG+ + +
Sbjct: 133 LKISITRIPETVLQVFKRNLKFDIQTSEPDL----SKIDKTLIDTLMPFQQDGLCYGISK 188
Query: 189 GGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
GR ++AD+MGLGKTIQA+ +A F+ WP+LI+ PSS+R W+ I ++L P++ +
Sbjct: 189 NGRCIIADDMGLGKTIQALGIAYYFKASWPLLIVVPSSVRFQWSEAIYEFLPSIPAQYIH 248
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHF 308
+ NTK I D IISYD++ + + L + VI DESH
Sbjct: 249 HFA---------------NTKDYIG-DEKITIISYDLLSRAVDTLQKHIYGFVILDESHL 292
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
LK+ + R A I +A + +LL+GTPALSRPIEL+ Q+ + P K EYG RYC
Sbjct: 293 LKSNKTVRFQAAQRICAQAHHVVLLTGTPALSRPIELYSQINLIIPRFMK-YEEYGIRYC 351
Query: 369 KG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQ 425
G FG + G SN +EL L+K T MIRRLK DVL QLP K RQ + LD A
Sbjct: 352 AGQKTAFGWDFTGFSNMQELQLLLKMTCMIRRLKADVLNQLPSKIRQVIILDPA------ 405
Query: 426 IYALFRELEVVKGKIKACKSE-EEVQ--SLKFTEKNLINKIYTDSAEAKIPAVLDYLETV 482
++K K K + E++Q + F + N + + Y +S+ A++ AV +Y++ +
Sbjct: 406 ---------LIKAGTKEMKKKFEQMQKTTTDFDKHNAMLQYYYESSIARLKAVSEYVKDL 456
Query: 483 IEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAV 542
E K L++AHHQ +LDAI + + IRIDG T R+ + +FQE DD AAV
Sbjct: 457 FEKKRKCLLYAHHQNILDAICDVAESMNIQYIRIDGKTTSEQRKYQIDKFQEHDDYLAAV 516
Query: 543 LSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDI 602
LS+ A G+TLTAA V+F EL W PG L QAEDR HRIGQ +V + YL+A DT DD
Sbjct: 517 LSITAANAGITLTAAHLVVFTELFWNPGILCQAEDRVHRIGQNDNVIIQYLVAKDTADDY 576
Query: 603 VWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFL 646
+W +++ K++ L V + S+ ++ ++ Q+ L+SF+
Sbjct: 577 MWPLIKKKMDILNAVGLNQDFSINDVNTTMQKETG-QQNLNSFV 619
>gi|326426540|gb|EGD72110.1| hypothetical protein PTSG_11548 [Salpingoeca sp. ATCC 50818]
Length = 930
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 193/475 (40%), Positives = 292/475 (61%), Gaps = 39/475 (8%)
Query: 175 LPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAM 234
L ++R+GV+FA+++ GR+L+ DEMGLGKT+QAIA A FR WP+LI+ PSS++ W
Sbjct: 3 LDWKREGVQFAIRNCGRVLIGDEMGLGKTVQAIATAWVFRHEWPLLIIVPSSVKGSWIDE 62
Query: 235 IQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK--LQN 291
+++WL + P + VV RSG + LD +++Y ++ + L
Sbjct: 63 LEKWLPTLQPMDFNVV--------RSGTDVAH--------LDRRITLVTYGLLQQAVLAA 106
Query: 292 ILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEA 351
+ + FK++I DESH++KN +AKR+ +P++++++ LLLSGTPALSRP EL+ QL+A
Sbjct: 107 RIAEAGFKVIIVDESHYVKNRKAKRSKVIVPLLQQSRRCLLLSGTPALSRPEELYCQLDA 166
Query: 352 LYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPV 408
L + + Y RYC K G FG +GASN +ELH +++ +MIRRLKKDVL+QLP
Sbjct: 167 LCAGHFGSFTAYARRYCNAKMGRFGWDTKGASNLDELHARLRSGIMIRRLKKDVLSQLPP 226
Query: 409 KRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSA 468
KRRQ+V ++V K + ++ LE ++K S+ Q +F L+ ++ D++
Sbjct: 227 KRRQRVTVEVTNKKLCKL------LEAGFNELKRLDSDPNTQ--QFESHRLLQSLFHDTS 278
Query: 469 EAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQAL 528
AK+ + + +AG KFL+FA+H ML A+ + + V I I G TP R +
Sbjct: 279 TAKMDSGM------CDAGGKFLVFAYHLNMLKALEEAVASQGVEYIMIVGETPVHERHDM 332
Query: 529 VTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQV-SS 587
V +FQ + + A+LS+ A G+TLTAASTV+FAEL WTPG + QAEDRAHRIGQ +S
Sbjct: 333 VKKFQASNRCRVAILSLLAASQGITLTAASTVVFAELHWTPGIIEQAEDRAHRIGQTDTS 392
Query: 588 VNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSS--PAKQK 640
VN++YL+A +T+DDI+W + K+ + L+G + L + S+ S P QK
Sbjct: 393 VNIHYLVAPNTLDDILWSTLSRKVGVVSTTLNGERSRLVANKSRADKSLAPITQK 447
>gi|68076919|ref|XP_680379.1| DNA helicase [Plasmodium berghei strain ANKA]
gi|56501303|emb|CAH95084.1| DNA helicase, putative [Plasmodium berghei]
Length = 835
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 179/479 (37%), Positives = 288/479 (60%), Gaps = 42/479 (8%)
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+ +L FQ++GV F L+ GR+L+ DEMGLGKT+QA+A+ + WP +++ PSS+R
Sbjct: 278 LSDELKNFQKEGVHFGLKKNGRVLIGDEMGLGKTLQALALMAFYNKDWPFIVICPSSIRF 337
Query: 230 HWAAMIQQWLN--IPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVL 287
W +WL I +I V+ +SG K +IP + IISY+++
Sbjct: 338 QWKDQALRWLPHLIEEKDICVI--------KSG--------KMDIPRNTKMIIISYELIT 381
Query: 288 KLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFK 347
K N + +K ++ DESH+LKN+ +KRT A +PIIK A+ +LLSGTPAL++P EL++
Sbjct: 382 K--NDKYQNKYKCIVCDESHYLKNSFSKRTKAIVPIIKSAKRCVLLSGTPALNKPSELYE 439
Query: 348 QLEALYPDVYKNVHEYGNRYC--KGGVFGI---YQGASNHEELHNLMKATVMIRRLKKDV 402
Q+ ++ P+++ N +E+ +RYC ++ Y G + EELH + T+MIRRLKKDV
Sbjct: 440 QVSSIIPNLF-NYNEFCDRYCYKDKNIYTRKIEYVGCKHTEELHLFLTNTIMIRRLKKDV 498
Query: 403 LAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKN---- 458
L +LP K R ++ +++ ++ +I ++LE K + + +F + N
Sbjct: 499 LKELPDKLRSKIPIEIPPNELSEILIYSKKLESKKNI--NINDLDNINLSRFNDFNSNHD 556
Query: 459 ---------LINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKK 509
I++++ + AK+ A+ +Y+ +I+A KFL+F HH+ ++D I + +K
Sbjct: 557 NNNNDEENITISQLFKMTGYAKVKAIKEYITYLIDADIKFLLFCHHKLVMDEIDEFLKEK 616
Query: 510 KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTP 569
K+ IR+DG TP R+ + FQ + ++ A+LS+ A GVGL LTAA+TV+F EL W P
Sbjct: 617 KLGFIRVDGLTPIDKREIYIKNFQSDEKIRIALLSITACGVGLNLTAANTVVFGELYWVP 676
Query: 570 GDLIQAEDRAHRIGQV-SSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
G +IQAEDRAHRIG ++N++YL+A +T+D++VW ++ K L L+G E+SL V
Sbjct: 677 GQMIQAEDRAHRIGTTHDTINIHYLVAQNTIDEVVWKIINRKWNTLTTALNGTEDSLNV 735
>gi|300708724|ref|XP_002996536.1| hypothetical protein NCER_100376 [Nosema ceranae BRL01]
gi|239605845|gb|EEQ82865.1| hypothetical protein NCER_100376 [Nosema ceranae BRL01]
Length = 594
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 187/495 (37%), Positives = 287/495 (57%), Gaps = 51/495 (10%)
Query: 157 PDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDV 216
P + + YD + I K+ FQ++ V +AL GRI+L D+MGLGKTIQA+ +A +R
Sbjct: 148 PIINKSYD-LEGEIYDKMFVFQKEAVIYALNRAGRIILGDDMGLGKTIQALGIAYYYRIE 206
Query: 217 WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDG 276
WP+LI+ P+SL +WAA I+Q+LN+ S++V + G
Sbjct: 207 WPLLIIAPASLLDNWAASIKQFLNLD-SKVVRARTDFGDK-------------------- 245
Query: 277 LFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
+IISYD+ K +I+ + N+ ++I DE H++K+A +KRT LPI++ A +L+SGT
Sbjct: 246 -ISIISYDMCSKFIDIVNTYNYGVIIVDECHYIKSATSKRTKNILPILQNAGRLILMSGT 304
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG---GVFGIYQGASNHEELHNLMKATV 393
PA+SRP+EL+ A+ +++ N EYG RYC G + Y+G ++ EEL+ ++
Sbjct: 305 PAVSRPLELYTIFCAVDKNLFPNFSEYGIRYCNGRKIKQWYDYKGCTHAEELNFILNKYF 364
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK VL QLP K R+Q+ ++ L + + I E ++
Sbjct: 365 MIRRLKDQVLNQLPPKSRRQIIINCG-------------LNIDRKNISLVGDNVEQTAMG 411
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHC 513
+Y ++A K+ V Y++T++E KF+IFAHH M++ + KKV+
Sbjct: 412 ---------MYREAATQKLEPVKMYIDTILEKNIKFIIFAHHLSMMEGLSSYLADKKVNF 462
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
I++DG + RQ LV EFQ +V+ A+LS+ A GLTLTAA V+FAEL W PG L+
Sbjct: 463 IKMDGSVITSHRQRLVNEFQNNGNVRVALLSVTACNTGLTLTAAKLVVFAELYWNPGTLL 522
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIR 633
QAEDR HRIGQ SSV+++YL+ TVD+ VW ++ KL N+ Q L +N+L+ +++ +
Sbjct: 523 QAEDRIHRIGQSSSVDIHYLVCKGTVDEYVWPILLKKL-NVLQSLGMGKNNLK--NAECK 579
Query: 634 SSPAKQKTLDSFLKR 648
+ +Q TLD F +
Sbjct: 580 NIEIEQTTLDKFTNK 594
>gi|195576640|ref|XP_002078183.1| GD23310 [Drosophila simulans]
gi|194190192|gb|EDX03768.1| GD23310 [Drosophila simulans]
Length = 755
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 214/598 (35%), Positives = 316/598 (52%), Gaps = 66/598 (11%)
Query: 74 LSVKFFLHTSGNIAAKFT-YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEI 132
++ +L ++ AA+ + Y LV+ F+ +P +++ + R+W+F LS+
Sbjct: 148 ITCNLYLVSTHRFAAQTSGYHEQLVTVFKNMPTKSYDGQTRIWSFD----------LSDY 197
Query: 133 SGYNVEIENLHPLV------QRAIASASAAPDLREKYDQIPAHIESKL----LPFQRDGV 182
+L P V ++ + P + E + A IE KL +PFQ+DGV
Sbjct: 198 QSLTTHAADLKPYVHMNGIPKKVLDLCRQPPVVPE--SSVLASIEPKLADQLMPFQQDGV 255
Query: 183 RFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIP 242
F++ GRI++ DEMGLGKT QA+AVA F+D WP+L+ T +S R WA I L
Sbjct: 256 CFSIAQKGRIMICDEMGLGKTYQALAVADYFKDDWPLLVCTTASTRDSWAKHIMDLLPKV 315
Query: 243 PSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVI 302
P V VL N + + I SY+++ + ++ LM F +I
Sbjct: 316 PIHYVQVL----------------NNNQLYVGEAKVLITSYNMMERHEDKLMQRKFGFII 359
Query: 303 ADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHE 362
DESH LKN++AK T + +A+ +LLSGTPALSRP+ELF QL+ + + N E
Sbjct: 360 FDESHTLKNSKAKCTTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQ-MIDGKFMNFME 418
Query: 363 YGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
+ RYC G FG G SN EEL ++ + M+RR K +VL QL K R+ V LD A
Sbjct: 419 FTTRYCDGKQSTFGWDANGQSNLEELKVILNSKYMLRRTKVEVLPQLAEKNRETVVLDPA 478
Query: 420 -----EKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPA 474
E+ + A +EL+ KG+ SEE ++ + Y +AE K A
Sbjct: 479 LVWTNEETKETLDAFNKELKTAKGRA----SEE-----------ILLRFYARTAEVKTRA 523
Query: 475 VLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE 534
V YL+T+++ KF+IFAHH+ M+DAI KVH IRIDG T R V FQ+
Sbjct: 524 VCAYLKTIVKEQKKFIIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDLRSDSVDTFQK 583
Query: 535 KDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLL 594
K K A+LS+KA G+TLTAA ++FAEL W P L QAE RAHRIGQ V YL+
Sbjct: 584 KSSCKVALLSLKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLM 643
Query: 595 ANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKRCNNV 652
A++T DDI+W+++++K E L +V EN + +++ ++P ++ + C +
Sbjct: 644 AHNTADDIIWNMLKNKQEVLSKVGIFAENLQKATAT---AAPTSSHKIEEYFSPCKST 698
>gi|28603792|ref|NP_788839.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Bos taurus]
gi|60390964|sp|Q9TTA5.1|SMAL1_BOVIN RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1;
AltName: Full=HepA-related protein; AltName:
Full=Sucrose nonfermenting protein 2-like 1
gi|6651385|gb|AAF22285.1|AF173643_1 DNA-dependent ATPase A [Bos taurus]
gi|296490282|tpg|DAA32395.1| TPA: SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Bos taurus]
Length = 941
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 221/620 (35%), Positives = 344/620 (55%), Gaps = 52/620 (8%)
Query: 58 APKGSLGDFSKEQVPKLSVKFF------LHTSGNIAAKFTYDPVLVSAFRKIPKATWNAK 111
+P S G +K +P F L + A +Y L++ F+++ ++ K
Sbjct: 308 SPSTSSGIIAKTGLPAAPSLAFVKGQCVLISRARFEADISYSEDLIALFKQMDSRKYDVK 367
Query: 112 ERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV-----QRAIASASAAPDLRE-KYD 164
R W+F L K++ + G V+++ L + Q S S D+ E
Sbjct: 368 TRKWSF---LLEEYSKLMERVRGPPQVQLDPLPKTLTLFRAQLQKTSLSPVADIPEADLS 424
Query: 165 QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTP 224
++ + + S LLPFQR GV FA+ GR+LLAD+MGLGKTIQAI +A +R WP+L++ P
Sbjct: 425 RVDSKLVSSLLPFQRAGVNFAIAQRGRLLLADDMGLGKTIQAICIAAYYRKEWPLLVVVP 484
Query: 225 SSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
SS+R W +WL ++ P +I VV++ G +R DGL NI+S+
Sbjct: 485 SSVRFTWEQAFCRWLPSLNPLDINVVVT---GKDRL--------------TDGLVNIVSF 527
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
D++ KL+ L FK+VI DESHFLKN + AA +P++K A+ +LLSGTPA+SRP
Sbjct: 528 DLLSKLEKQLKPP-FKVVIIDESHFLKNIKTAVCAA-MPLLKVAKRVILLSGTPAMSRPA 585
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVMIRRLKK 400
EL+ Q+ A+ P + H +G RYC K +G Y G+SN EL L++ VM+RRLK
Sbjct: 586 ELYTQILAVRPTFFPQFHAFGLRYCGAKRQPWGWDYSGSSNLGELKLLLEEAVMLRRLKG 645
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLI 460
DVL+QLP K+ + + A + + K K + ++E L F
Sbjct: 646 DVLSQLPAKQPRWWWSPQARSMPGPEPPWMPPAKEMTTKDKTKQQQKEALILFFNR---- 701
Query: 461 NKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGG 519
+AEAKIP++++Y+ ++E+G KFL+FAHH+ +LDAI + +K+V IRIDG
Sbjct: 702 ------TAEAKIPSIIEYILDLLESGREKFLVFAHHKVVLDAITKELERKRVQHIRIDGS 755
Query: 520 TPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRA 579
T A R+ + F ++ VLS+ A +GLT ++A V+F EL W PG L+QAEDR
Sbjct: 756 TSSADRETSASSFSCPRALR-GVLSITAANMGLTFSSADLVVFGELFWNPGVLMQAEDRV 814
Query: 580 HRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS-SSQIRSSPAK 638
HRIGQ+SSV+++YL+A T DD +W +++ K++ LG+ N E++ ++ S +K
Sbjct: 815 HRIGQLSSVSIHYLVARGTADDYLWPLIQEKIKVLGEAGLSETNFSEMTEATDYFSKDSK 874
Query: 639 QKTLDSFLKRCNNVDDSEHQ 658
Q+ + + ++ D ++ +
Sbjct: 875 QQKIYNLFQKSFEEDGNDME 894
>gi|290976679|ref|XP_002671067.1| DEXH-box helicase [Naegleria gruberi]
gi|284084632|gb|EFC38323.1| DEXH-box helicase [Naegleria gruberi]
Length = 1385
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 188/504 (37%), Positives = 290/504 (57%), Gaps = 54/504 (10%)
Query: 158 DLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW 217
DL K+ P + +KL PFQ+ G+ FA++ GR+LL DEMG+GKT+Q ++ F+ W
Sbjct: 324 DLAHKF---PKQVWTKLRPFQKQGISFAVKREGRVLLGDEMGVGKTLQGLSTMYYFKQDW 380
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
P+LI+ PSSL+ +W I++W + S+ G ++ + I + + IP D
Sbjct: 381 PLLIICPSSLKHNWGKEIEEWF---------ITSERGHTDITMEKIKIISHGKQIP-DNY 430
Query: 278 FNIISYDVVLKL-------------QNILMSSNFKIVIADESHFLKNAQAKRTAATLPII 324
NI+SY + + IL F +I DESH+LKN+ KR++ +P +
Sbjct: 431 INIVSYTMAANMLESQPCNNDGGGGGAILNGIKFNCIICDESHYLKNSSTKRSSHIVPFL 490
Query: 325 KKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHE-YGNRYC--KGGVFGIY-QGAS 380
K+A+ ++++GTPALSRP+E++ QL L D + + RYC K FG+ +G+S
Sbjct: 491 KQAKRLVMITGTPALSRPVEVYPQLNLLLDDKFTFTRSAFTYRYCDAKETQFGLDDKGSS 550
Query: 381 NHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKI 440
N EL+ L+ TVMIRR K+ VL++LP K+RQ+V L V D++Q+ ++ K+
Sbjct: 551 NVLELNYLLSRTVMIRRRKETVLSELPEKQRQRVLLSVKPSDLKQLEFSAERMKRAIEKM 610
Query: 441 KACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIE--AGCKFLIFAHHQPM 498
K + EE F + + I ++YT + +AK+PAV +Y++ +IE KFL+FA+H+ +
Sbjct: 611 KTAITSEEHNQSNFDKNSEIFRMYTMTGKAKLPAVKEYIQDMIENTGDLKFLVFAYHKEV 670
Query: 499 LDAIHQLF---------LKKKV-------------HCIRIDGGTPPASRQALVTEFQEKD 536
+D I + LK + + IRIDG T RQ LV F+
Sbjct: 671 MDGIEECVALELAKFYNLKGQKKKSKDLQKKMRGDYYIRIDGSTDSNRRQNLVNTFRTNG 730
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN 596
+ A+LS+KA GVG T+T STV+FAEL WTP DL QAEDR HR+GQ ++V++ YLL
Sbjct: 731 HCRVAILSIKAAGVGYTMTPCSTVLFAELYWTPSDLRQAEDRVHRMGQTNAVSIKYLLGK 790
Query: 597 DTVDDIVWDVVRSKLENLGQVLDG 620
DT D+ +W +++ KLE +G+ +DG
Sbjct: 791 DTFDEYLWPLLQKKLEVVGKSVDG 814
>gi|380029845|ref|XP_003698575.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A-like
protein 1-like [Apis florea]
Length = 713
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 207/567 (36%), Positives = 316/567 (55%), Gaps = 42/567 (7%)
Query: 91 TYDPVLVSAFRKIPKATWNAKERLWTFPVP-FLSSAEKVLS-----EISGYNVEIENLHP 144
+Y P L+ + I ++ K + W+F + + + EK+++ +I G + +H
Sbjct: 122 SYFPPLIEILKTISSRLYDMKTKNWSFHLKDYEALMEKIINFKSDVQIIGLPKIVLQVHX 181
Query: 145 LVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTI 204
+ + S +A ++ + D P +E+ ++PFQR+G+ + + GGR ++AD+MGLGKTI
Sbjct: 182 NIXKNDTSMNAIENI-DLSDIDPKLLEN-IMPFQREGICYGISKGGRCMIADDMGLGKTI 239
Query: 205 QAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIV 264
QA+ +A FR WP+LI+ PSS+R WA I +L P+ + +
Sbjct: 240 QALGIAHYFRKNWPLLIIVPSSMRYQWAEAICTFLPSVPTHYIYQFA------------- 286
Query: 265 SSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPII 324
NTK +I D I +YD++++ + F VI DESH LK+++ R A I+
Sbjct: 287 --NTK-DIIDDSKIVITTYDLLVRAVDTFQCKIFGFVILDESHVLKSSKTARFKAAQCIV 343
Query: 325 KKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG--GVFGI-YQGASN 381
+A++ +LLSGTP LSRPIEL+ Q+ + P+ + HEYG RYC G FG + G+SN
Sbjct: 344 LQARHVVLLSGTPVLSRPIELYSQINLIMPN-FMGYHEYGTRYCAGEKTSFGWDFTGSSN 402
Query: 382 HEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL-EVVKGKI 440
+ELH L+K T +IRRLK D+L QLP+K+R + + + D+ +I E+ + +KGKI
Sbjct: 403 MQELHLLLKRTCIIRRLKNDILNQLPIKKRXEGII-LLNPDLIKIGKEMLEISKKLKGKI 461
Query: 441 KACKSEEEVQSLKFTEK-NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
L EK N + + Y +S+ AK A+ DY+ + K +IFAHH +L
Sbjct: 462 -----------LNNLEKHNTLLQYYNESSVAKQKAICDYVSKLFINKQKCIIFAHHHNIL 510
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
+AI + + IRIDG R+ + +FQ D AAVLS+ A G+TLTAA
Sbjct: 511 NAICDVVESMNIKYIRIDGKMNSERRKYEIDKFQNNDSYIAAVLSITAANAGITLTAAQL 570
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
VIFAEL W PG L QAEDR HRIGQ V + YL+A TVDD W +++ K+ L +V
Sbjct: 571 VIFAELFWNPGILCQAEDRVHRIGQYKDVIIQYLVAKHTVDDYXWPLIQKKMNVLNEVGL 630
Query: 620 GHENSLEVSSSQIRSSPAKQKTLDSFL 646
+ SL+ ++ +KQKTL+ F+
Sbjct: 631 DQDFSLKDIDYTTQALNSKQKTLNFFI 657
>gi|308498668|ref|XP_003111520.1| hypothetical protein CRE_02961 [Caenorhabditis remanei]
gi|308239429|gb|EFO83381.1| hypothetical protein CRE_02961 [Caenorhabditis remanei]
Length = 679
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 212/590 (35%), Positives = 319/590 (54%), Gaps = 45/590 (7%)
Query: 72 PKLSVKFFLHTSGNIAAKF-TYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLS 130
P + VK L I +F + +V +++ +++ +R WT + S+ +L
Sbjct: 90 PTIGVKLKLDVEDRIRIEFYPFHSSIVDLIKQVSSRNYDSAKRTWTISINDHSNICNLLK 149
Query: 131 EISGYNVEIENLHPLVQRAIASASAAP-----DLREKYDQIPAHIESKLLPFQRDGVRFA 185
VE+E + Q + + P DL + D P IE KL P+Q++GV FA
Sbjct: 150 NAQTVKVELEQIP---QNILGMLNFKPKPTPSDLTQIMD--PTLIE-KLFPYQKEGVLFA 203
Query: 186 LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSE 245
L+ GR+LLADEMGLGK++QA+ +A ++ WP+LI+ P+S++ W I + I
Sbjct: 204 LERNGRLLLADEMGLGKSVQALTIARYYKADWPLLIVCPASVKGAWKKQINTFFPI---- 259
Query: 246 IVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADE 305
+R SS+ ++ I+SY+ ++ ++L + +I DE
Sbjct: 260 ----------IHRIFIVDKSSDPLPDVRTSNTVAIMSYEQMVLKHDVLKREKYSTIIFDE 309
Query: 306 SHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGN 365
SH LK+ +A+RT + K A + +LLSGTPALSRP ELF Q+ + ++ N HE+
Sbjct: 310 SHMLKDGKARRTKVATELSKIAIHVILLSGTPALSRPAELFTQIRMVDHKLFTNFHEFAV 369
Query: 366 RYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKD 422
RYC G G F +G +N EEL +M +MIRRLK DVL LP KRR+ V++ D
Sbjct: 370 RYCDGKQGRFCFEAKGCTNSEELAAIMFKRLMIRRLKADVLKDLPEKRREVVYVSGPTID 429
Query: 423 MRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDY-LET 481
R +L+ KA E+V S++ ++L+ + Y+ + K AV ++ LE
Sbjct: 430 AR-----MDDLQ------KARADYEKVNSMERKHESLL-EFYSLTGIVKAAAVCEHILEN 477
Query: 482 VIEAGC---KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDV 538
K LIFAHHQ +LD I K+K+ IRIDG TP R AL FQ D +
Sbjct: 478 YFYPDAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHQRTALCDSFQNDDSI 537
Query: 539 KAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
+ AVLS+ A GVG+TLTAAS V+FAE+ + PG L+QAEDRAHR+GQ SV V YL+A T
Sbjct: 538 RVAVLSITAAGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKT 597
Query: 599 VDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKR 648
DD++W++V+ KL+ LGQV + +R + A Q +++ + ++
Sbjct: 598 ADDVMWNMVQQKLDVLGQVSLSSDTFRTADKMHLRFNDAAQPSINEYFQK 647
>gi|307191279|gb|EFN74926.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Camponotus
floridanus]
Length = 670
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 218/591 (36%), Positives = 324/591 (54%), Gaps = 49/591 (8%)
Query: 66 FSKEQVPKLSVKFFLHTSGNIAAKFT-YDPVLVSAFRKIPKATWNAKERLWTFPV-PFLS 123
FS+ V L+ K ++ ++ A + + + P ++ F+ +P ++ K R+W F + + +
Sbjct: 67 FSRTSV--LTGKCYMISNERFALEISSFVPAVIETFKTLPSRAYDVKSRIWNFHINEYDT 124
Query: 124 SAEKVLSEISGYNVEIENLHPLVQRAIASASAAPD----LREKYDQIPAHIESKLLPFQR 179
+K++ S N+ I + P I S D L++ +I + L+PFQR
Sbjct: 125 LMQKLIPHES--NISITQI-PQTILQIFKKSLQSDHKNILKQDLSKIDKKLVDSLMPFQR 181
Query: 180 DGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL 239
DG+ F + GR ++AD+MGLGKTIQA+ +A F++ WP+LI+ PSS+R W+ I ++L
Sbjct: 182 DGICFGISKSGRCMIADDMGLGKTIQALGIAHYFQESWPLLIIVPSSVRYQWSETIYEYL 241
Query: 240 NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFK 299
P V FT + ++ D IISYD++++ NIL F
Sbjct: 242 PSLPMHYV-----------RHFT-----SGKDCIEDAKIIIISYDILIRAVNILEKHIFG 285
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
VI DESH LK+ + R A I A++ +LL+GTPALSRPIEL Q+ + P +
Sbjct: 286 FVILDESHMLKSNKTIRFQAAQKICVHARHVVLLTGTPALSRPIELHSQISLILPRFIR- 344
Query: 360 VHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFL 416
+YG RYC G VFG + G+SN +EL L+K T MIRRLK DVL+QLP K RQ + L
Sbjct: 345 YEDYGIRYCAGQKNVFGWDFTGSSNMQELQLLLKTTCMIRRLKSDVLSQLPSKTRQVIIL 404
Query: 417 DVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVL 476
D D+ + E+ K+K S E N + + YT+S+ ++ AV
Sbjct: 405 D---SDLINTHKRMNEMA---KKLKNNTS---------LEHNTLLQYYTESSFVRLKAVC 449
Query: 477 DYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD 536
+Y+ + E K L++AHHQ +LDAI + K+ IRIDG T R+ + +FQE+D
Sbjct: 450 NYVTNLFENKRKCLLYAHHQNILDAICNVAESMKIKYIRIDGKTNSEQRKHQIDQFQERD 509
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN 596
D AAVLS+ A G+TLTAA+ V+F EL W PG L QAEDR HRIGQ +V + YL+A
Sbjct: 510 DYLAAVLSITAANAGVTLTAANLVVFTELFWNPGILCQAEDRVHRIGQNDNVIIQYLVAR 569
Query: 597 DTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAK-QKTLDSFL 646
+T DD +W ++++KL L G + L + S + Q+ L SFL
Sbjct: 570 NTADDYIWPLIKNKLHVLNAA--GLDQDLSIDSVDTTVQKKRGQQDLTSFL 618
>gi|194766057|ref|XP_001965141.1| GF23602 [Drosophila ananassae]
gi|190617751|gb|EDV33275.1| GF23602 [Drosophila ananassae]
Length = 752
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 210/608 (34%), Positives = 320/608 (52%), Gaps = 47/608 (7%)
Query: 21 ALQQIAQRHSKPFSDSPSYKVEALPQGSRTLPLSVAPAPKGSLGDFSKEQVPKLSVKFFL 80
AL+ I Q S+ + ++ + + + S++ AP+ G +++ ++ ++
Sbjct: 92 ALKAIKQSSSRELARGAAHPYQKQHREAGKGKPSLSLAPQKEDGPTVAQRLTSITCNLYM 151
Query: 81 HTSGNIAAKFT-YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEI 139
++ A T Y L++ F+ +P +++ R+W F + S + +++ Y
Sbjct: 152 ISTHRFAVHTTGYHEKLIAVFKNMPTRSYDNNTRIWNFDLKDYQSLQTHTADLKPY---- 207
Query: 140 ENLHPLVQRAIASASAAPDLREK--YDQIPAHIESKLLPFQRDGVRFALQHGGRILLADE 197
+++ + ++ I P +K I + KL+PFQ+DGV FA+ GRI++ DE
Sbjct: 208 VHMNSIPKKVIDLCQKPPMALDKSVLASIEPKLADKLMPFQQDGVCFAIAQMGRIMICDE 267
Query: 198 MGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN 257
MGLGKT QA+AVA FRD WP+L+ T +S R WA + + L P + VL
Sbjct: 268 MGLGKTYQALAVADYFRDDWPLLVCTTASTRDSWAKHVVELLPKVPIHYLQVL------- 320
Query: 258 RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRT 317
N + + I SY+++ + + L+ + +I DESH LKN +AK T
Sbjct: 321 ---------NNNQQYVAEAQVLITSYNMMERHMDKLLQRKYGFIIFDESHTLKNGKAKCT 371
Query: 318 AATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG--GVFGI 375
A + +A+ +LLSGTPALSRP+ELF QL+ + + + E+ RYC G FG
Sbjct: 372 AVAKRLTDQAKRVILLSGTPALSRPLELFTQLQ-MVDSKFMSFMEFTTRYCDGKQSTFGW 430
Query: 376 -YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA-----EKDMRQIYAL 429
G SN EEL ++ M+RR K +VL QL K R+ V LD A E+ + A
Sbjct: 431 DANGQSNLEELKVILTLKYMLRRTKTEVLPQLAEKNRETVILDPALVSTNEETQTSLDAF 490
Query: 430 FRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKF 489
+EL KGK+K EE+ + + Y +AE K AV YL+T+++ KF
Sbjct: 491 SKELNSSKGKMK-----EEI----------LLRFYARTAEVKTKAVCAYLKTLVKEKMKF 535
Query: 490 LIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGG 549
+IFAHH+ M+DAI + KVH IRIDG T R V FQ+ K A+LS+KA
Sbjct: 536 IIFAHHRVMMDAISDCLAELKVHYIRIDGQTRSDLRADFVDTFQKNSSCKVALLSLKACN 595
Query: 550 VGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRS 609
G+TLTAA ++FAEL W P L QAE RAHRIGQ +V YL+A+ T DD +W ++++
Sbjct: 596 SGITLTAAEMILFAELDWNPSTLAQAESRAHRIGQTKAVICRYLMAHGTADDTIWAMLKN 655
Query: 610 KLENLGQV 617
K E L +V
Sbjct: 656 KQEVLSKV 663
>gi|24581780|ref|NP_608883.1| Marcal1 [Drosophila melanogaster]
gi|75027220|sp|Q9VMX6.2|SMAL1_DROME RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1
gi|22945611|gb|AAF52182.2| Marcal1 [Drosophila melanogaster]
gi|39752623|gb|AAR30193.1| RE44811p [Drosophila melanogaster]
gi|220948472|gb|ACL86779.1| Marcal1-PA [synthetic construct]
Length = 755
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 206/553 (37%), Positives = 298/553 (53%), Gaps = 43/553 (7%)
Query: 74 LSVKFFLHTSGNIAAKFT-YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEI 132
++ +L ++ AA+ + Y LV+ F+ +P ++ + R+W+F + S + +++
Sbjct: 148 ITCNLYLISTHRFAAQTSGYHEQLVTVFKNMPTKCYDGQTRIWSFDLSDYQSLKTHAADL 207
Query: 133 SGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRI 192
Y V + + V P+ R I + +L+PFQ+DGV FA+ GRI
Sbjct: 208 KPY-VHMNGIPKKVLDLCGQPPVVPE-RSVLASIEPKLADQLMPFQQDGVCFAIAQKGRI 265
Query: 193 LLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQ 252
++ DEMGLGKT QA+AVA F+D WP+L+ T +S R WA I L P V VL
Sbjct: 266 MICDEMGLGKTYQALAVADYFKDDWPLLVCTTASTRDSWAKHIMDLLPKVPIHYVQVL-- 323
Query: 253 LGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA 312
N + + I SY+++ + ++ LM F +I DESH LKN+
Sbjct: 324 --------------NNNQLYVGEAKVLITSYNMMERHEDKLMQRKFGFIIFDESHTLKNS 369
Query: 313 QAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG-- 370
+AK T + +A+ +LLSGTPALSRP+ELF QL+ + + N E+ RYC G
Sbjct: 370 KAKCTTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQ-MIDGKFMNFMEFTTRYCDGKQ 428
Query: 371 GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA-----EKDMR 424
FG G SN EEL ++ M+RR K +VL QL K R+ V LD A +
Sbjct: 429 STFGWDANGQSNLEELKVILHLKYMLRRTKVEVLPQLAEKNRETVVLDPALVWTNAETKE 488
Query: 425 QIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIE 484
+ A +EL+ KG+ TE+ L+ + Y +AE K AV YL+T+++
Sbjct: 489 TLDAFNKELKTAKGRA--------------TEEILL-RFYARTAEVKTRAVCAYLKTLVK 533
Query: 485 AGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLS 544
KF+IFAHH+ M+DAI KVH IRIDG T R V FQ+K K A+LS
Sbjct: 534 EQKKFIIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSSCKVALLS 593
Query: 545 MKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVW 604
+KA G+TLTAA ++FAEL W P L QAE RAHRIGQ V YL+A++T DDI+W
Sbjct: 594 LKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLIAHNTADDIIW 653
Query: 605 DVVRSKLENLGQV 617
+++++K E L +V
Sbjct: 654 NMLKNKQEVLSKV 666
>gi|195472837|ref|XP_002088705.1| GE11268 [Drosophila yakuba]
gi|194174806|gb|EDW88417.1| GE11268 [Drosophila yakuba]
Length = 755
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 203/549 (36%), Positives = 296/549 (53%), Gaps = 49/549 (8%)
Query: 77 KFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYN 136
+F +HT+G Y LV+ F+ +P ++ ++ R+W+F + S E +++ Y
Sbjct: 159 RFAVHTTG-------YHEKLVAVFKNMPTKSYESQTRIWSFDLSDYQSLETHAADLKPY- 210
Query: 137 VEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLAD 196
V + + V P+ R I + +L+PFQ+DGV F++ GRI++ D
Sbjct: 211 VHMVGIPKKVMDLCRQPPIVPE-RSVLASIEPKLADQLMPFQQDGVCFSIAQKGRIMICD 269
Query: 197 EMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGS 256
EMGLGKT QA+AVA F+D WP+L+ T +S R WA I L P V VL
Sbjct: 270 EMGLGKTYQALAVADYFKDDWPLLVCTTASTRDSWAKHIMDLLPRVPIHYVQVL------ 323
Query: 257 NRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKR 316
N + + I SY+++ + ++ LM + +I DESH LKN++AK
Sbjct: 324 ----------NNNQQYVGEAKVLITSYNMMERHEDKLMQRKYGFIIFDESHTLKNSKAKC 373
Query: 317 TAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG--GVFG 374
T + +A+ +LLSGTPALSRP+ELF QL+ + + N E+ RYC G FG
Sbjct: 374 TTTAKRLTDQAKRVVLLSGTPALSRPLELFSQLQ-MVDSKFMNFMEFTTRYCDGKQSTFG 432
Query: 375 I-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA-----EKDMRQIYA 428
G SN EEL ++ M+RR K +VL QL K R+ V LD A ++ + A
Sbjct: 433 WDASGQSNLEELKVILNLKYMLRRTKMEVLPQLAEKNRETVVLDPALVWTNDETKDTLDA 492
Query: 429 LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCK 488
+EL+ KG+ + EE+ + + Y +AE K AV Y++T+++ K
Sbjct: 493 FNKELKTSKGR-----AMEEI----------LLRFYARTAEVKSRAVCAYIKTLVKEQKK 537
Query: 489 FLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAG 548
F+IFAHH+ M+DAI KVH IRIDG T R V FQ+K K A+LS+KA
Sbjct: 538 FIIFAHHRVMMDAISDCLSGLKVHYIRIDGQTRSDLRSDSVDTFQKKSSCKVALLSLKAC 597
Query: 549 GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVR 608
G+TLTAA ++FAEL W P L QAE RAHRIGQ V YL+A++T DD +W++++
Sbjct: 598 NSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLMAHNTADDTIWNMLK 657
Query: 609 SKLENLGQV 617
+K E L +V
Sbjct: 658 NKQEVLSKV 666
>gi|194856372|ref|XP_001968736.1| GG25032 [Drosophila erecta]
gi|190660603|gb|EDV57795.1| GG25032 [Drosophila erecta]
Length = 754
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 204/551 (37%), Positives = 296/551 (53%), Gaps = 49/551 (8%)
Query: 75 SVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISG 134
+ +F HTSG Y LV+ F+ +P ++ ++ R+W+F + S E +++
Sbjct: 156 TYRFAAHTSG-------YHEKLVAVFKNMPTKSYESQSRIWSFDLSDYQSLETHTADLKP 208
Query: 135 YNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILL 194
Y V + + V P+ R I + +L+PFQ+DGV F++ GRI++
Sbjct: 209 Y-VHLVGIPKKVLDLCRQPPIVPE-RSVLASIEPKLADQLMPFQQDGVCFSIAQKGRIMI 266
Query: 195 ADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLG 254
DEMGLGKT QA+AVA F+D WP+L+ T +S R WA I + L P V VL
Sbjct: 267 CDEMGLGKTYQALAVADYFKDDWPLLVCTTASTRDSWAKHIMELLPKVPIHYVQVL---- 322
Query: 255 GSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQA 314
N + + I SY+++ + +N L+ + +I DESH LKN++A
Sbjct: 323 ------------NNNQQYVGEAKVLITSYNMMERHENKLLQRKYGFIIFDESHTLKNSKA 370
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG--GV 372
K T + +A+ +LLSGTPALSRP+ELF QL+ + + + E+ RYC G
Sbjct: 371 KCTTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQ-MVDGKFMSFMEFTTRYCDGKQST 429
Query: 373 FGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA-----EKDMRQI 426
FG G SN EEL L+ M+RR K +VL QL K R+ V LD A ++ +
Sbjct: 430 FGWDANGQSNLEELKVLLNLKYMLRRTKVEVLPQLAEKNRETVVLDPALVWTNDETKDTL 489
Query: 427 YALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAG 486
A +EL+ KG+ E++ +L+ + Y +AE K AV YL+T+++
Sbjct: 490 DAFNKELKTSKGR--------EME-------DLLLRFYARTAEVKARAVCAYLKTLVKEQ 534
Query: 487 CKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMK 546
KF+IFAHH+ M+DAI K+H IRIDG T R V FQ K K A+LS+K
Sbjct: 535 KKFIIFAHHRVMMDAISDCLSGLKIHYIRIDGQTRSDLRSDFVDTFQNKSSCKVALLSLK 594
Query: 547 AGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDV 606
A G+TLTAA ++FAEL W P L QAE RAHRIGQ V YL+A+ T DD +W++
Sbjct: 595 ACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLMAHKTADDTIWNM 654
Query: 607 VRSKLENLGQV 617
+++K E L +V
Sbjct: 655 LKNKQEVLSKV 665
>gi|429329966|gb|AFZ81725.1| helicase family member protein [Babesia equi]
Length = 784
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 182/477 (38%), Positives = 279/477 (58%), Gaps = 32/477 (6%)
Query: 173 KLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWA 232
+L PFQ +GV F ++ GR+L+ DEMGLGKT+QA+A++ + WP++I+ PSSLR W
Sbjct: 327 ELKPFQHEGVEFGIRKNGRVLIGDEMGLGKTLQALAISAFYSIDWPMMIVCPSSLRFQWR 386
Query: 233 AMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNI 292
+WL P + G + N + +IPL IISYD++ K N
Sbjct: 387 DQCIRWL---PHLV-----------DHGDIFLVKNGRNDIPLHAKVVIISYDLLTK--NE 430
Query: 293 LMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEAL 352
N+++++ DESH+LKN AKRT +P+I+ A+ A+LLSGTPAL+ P EL++Q+ +
Sbjct: 431 RFRHNYRVIVIDESHYLKNRLAKRTKQIVPLIRMAKRAILLSGTPALNLPSELYEQISCI 490
Query: 353 YPDVYKNVHEYGNRYCKGGVFGI-----YQGASNHEELHNLMKATVMIRRLKKDVLAQLP 407
P+ + + + + RYC+ Y G+ + ELH + TVMIRRLK++VL +LP
Sbjct: 491 IPE-FSSYNNFVERYCEKKKNWYTNKMEYVGSKHTHELHLFLVKTVMIRRLKENVLHELP 549
Query: 408 VKRRQQVFLDVAEKDMRQIYALFRELEV-VKGKIKACKSEEEVQSLKFTEKNLINKIYTD 466
K R ++ +++ ++ A LE + + EEE +S + I+
Sbjct: 550 PKIRSKIPIELPPSFLKSCKAALSPLETRILSDKDSDNFEEEFKSFQ--------DIFRM 601
Query: 467 SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQ 526
+ EAK V Y+E +I+ KFLIFAHH ++D+I +K + IRIDG T R+
Sbjct: 602 TGEAKCKGVCQYIEHLIDTNIKFLIFAHHMIVMDSIEDKLKEKGANYIRIDGSTSLDKRE 661
Query: 527 ALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIG-QV 585
A V FQ K A+LS+ A GVGL LTA+STV+FAEL W PG +IQAEDRAHR+G +
Sbjct: 662 AYVNLFQTDKHCKIALLSLSACGVGLNLTASSTVVFAELFWVPGQMIQAEDRAHRLGTKH 721
Query: 586 SSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTL 642
+S+N++YL+A ++V++ VW V+ K E + L+G ++L +S ++ P Q ++
Sbjct: 722 TSINIHYLIAENSVEETVWKVINRKWETITSTLNGQISNLILSKDDKKNIPQNQHSI 778
>gi|269860391|ref|XP_002649917.1| SWF/SNF family helicase [Enterocytozoon bieneusi H348]
gi|220066677|gb|EED44151.1| SWF/SNF family helicase [Enterocytozoon bieneusi H348]
Length = 568
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 186/487 (38%), Positives = 270/487 (55%), Gaps = 59/487 (12%)
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
I KL+PFQ+DGV+F ++ GR+LLADEMGLGKTIQA+A+A + +P+LI+ P+SL
Sbjct: 132 IYDKLMPFQKDGVKFGIKKQGRVLLADEMGLGKTIQALAIAFYYHSNFPLLIIAPASLIH 191
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKL 289
W + + ++LNI G I K ++ +IISY++ L
Sbjct: 192 EWESAVSKFLNI-----------------RGIII---KNKEDLNKTNSVSIISYNLATTL 231
Query: 290 QNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQL 349
L N+K++I DE H+LK+ ++KRT +PI++ +++SGTPALSRP ELF L
Sbjct: 232 YTSLNQLNYKVIICDECHYLKSLKSKRTKELIPILQNTLRLIMISGTPALSRPCELFPIL 291
Query: 350 EALYPDVYKNVHEYGNRYCKG---GVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQL 406
L +++N +EYG RYC G + Y+G SN +EL L++ +MIRR K D+L L
Sbjct: 292 HCLNKKLFRNFNEYGTRYCDGKKVNGYMDYKGCSNSDELIFLLEKEIMIRRNKNDILTNL 351
Query: 407 PVKRRQQVFL------DVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLI 460
P KRR+ + L D + Y E +V+K
Sbjct: 352 PPKRRKHIILHSNSTIDYTISNKTAYYGNTVEDDVIKA---------------------- 389
Query: 461 NKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
Y +AE K +V++Y++ +I KFL+FAHHQ M++ + ++ IRIDG T
Sbjct: 390 ---YKLAAEIKQESVINYIKKMITNNDKFLVFAHHQTMINELENCCQNCNIYYIRIDGRT 446
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
R LV FQ + + A+LS+ A GLTLTAA +V+FAEL W PG L+QAEDR H
Sbjct: 447 GKQKRYELVELFQTNTEYQVAILSLTAASTGLTLTAAKSVVFAELYWNPGTLMQAEDRIH 506
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQK 640
RIGQ + V++YYL+ T+D+IVW + KL L ++ G + + +I + QK
Sbjct: 507 RIGQTTPVDIYYLICKKTIDEIVWPYLLKKLNILEKI--GMSTNTFKKADKILDN---QK 561
Query: 641 TLDSFLK 647
TLD FLK
Sbjct: 562 TLDEFLK 568
>gi|429962731|gb|ELA42275.1| hypothetical protein VICG_00675 [Vittaforma corneae ATCC 50505]
Length = 583
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 324/615 (52%), Gaps = 89/615 (14%)
Query: 64 GDFSKEQVPKLSVKFFLHTSGNIAAKFTYDP---VLVSAFRKIPKATWNAKERLWTFPVP 120
D E ++ F + S N + P ++ K+P+++++ K WTF V
Sbjct: 45 NDLQVEDSKNITTPFKVKISLNKNCRVLLKPSNKLIALVLSKLPRSSYDTKSNEWTFDVE 104
Query: 121 FLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRD 180
+ E+V+ E+ + + + P +A + D YD + I L+ FQR+
Sbjct: 105 YY---EEVVKELVKSKIIFDKI-PQGTITLAKRTYKND---SYD-LQGGIYDILMAFQRE 156
Query: 181 GVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLN 240
V FA+ GRILLAD+MGLGKTIQA+A+A ++ +P+LIL+P+SL +W +Q++L+
Sbjct: 157 AVNFAINRNGRILLADDMGLGKTIQALAIANYYKLEYPLLILSPASLCYNWLDSVQRFLS 216
Query: 241 IPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKI 300
E ++ + R I+SY++ + ++L + + +
Sbjct: 217 ---EEACIIREKTDFGCRIA-------------------IMSYNLAVNFIDVLNTCKYGV 254
Query: 301 VIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNV 360
+I DE H+LK+ +KRT LP+++K+ +++SGTPA SRP+EL+ + AL +Y +
Sbjct: 255 IICDECHYLKSMNSKRTKLLLPLLQKSSRLIMISGTPATSRPLELYPIICALDRGLYPSF 314
Query: 361 HEYGNRYCKG---GVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLD 417
YG+RYC G G F Y+G SN EL +++ MIRR+K +VL QLP K R+Q+FLD
Sbjct: 315 QVYGSRYCDGRKIGTFFDYRGCSNAVELSAVIEKAFMIRRVKDNVLNQLPKKFRRQIFLD 374
Query: 418 VAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTE---KNLINKIYTDSAEAKI-- 472
E +LK E NL +I + +A I
Sbjct: 375 T--------------------------RASESTTLKKGELFGDNLDTRIMQEYNQASIIK 408
Query: 473 -PAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTE 531
V+ Y+E +IE K ++FAHH+ MLDA+ ++K++ IRIDG T RQ LV
Sbjct: 409 REPVIKYMEGIIEKKIKCIVFAHHKEMLDALESFCVEKQIKYIRIDGATQSTKRQNLVDM 468
Query: 532 FQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
FQ ++++ A+LS+ A GLTLT+ VIFAEL W PG ++QAEDR HRIGQ +V+++
Sbjct: 469 FQNDENIRIAILSLTACSTGLTLTSGKAVIFAELYWNPGTMLQAEDRVHRIGQCDNVDIH 528
Query: 592 YLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKRCNN 651
YL+A +T+D++VW + KL L SL +S +++R N
Sbjct: 529 YLVAKNTIDEMVWPKLLKKLTVL--------ESLGISKNELRHVKG------------TN 568
Query: 652 VDDSEHQQKLKYRKL 666
VD+ QQ+L+++++
Sbjct: 569 VDEPV-QQRLEFKRI 582
>gi|330797634|ref|XP_003286864.1| hypothetical protein DICPUDRAFT_31594 [Dictyostelium purpureum]
gi|325083166|gb|EGC36626.1| hypothetical protein DICPUDRAFT_31594 [Dictyostelium purpureum]
Length = 534
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 204/547 (37%), Positives = 308/547 (56%), Gaps = 48/547 (8%)
Query: 92 YDPVLVSAFRKIPKATWNAKE--RLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRA 149
Y+ V+ + F +P A + + + W F + L ++ +++ L P + +
Sbjct: 14 YNNVIDAIFESVPGAHYKEYQGCKWWLFKIQEHDRLCAKLYSLNQSELKVHRLPPHIIKT 73
Query: 150 IASASAAPD---LREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQA 206
A D L + Q+P S LLPFQ+ G+ F ++ GGR L+AD+MGLGKTIQ
Sbjct: 74 FLKPENASDPKPLDIDFSQMP----SSLLPFQKKGIEFGIEKGGRCLIADDMGLGKTIQG 129
Query: 207 IAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVS 265
I++A +R+ WP+LI+TPSSLRL WA I+++ IP S+I +V++ G
Sbjct: 130 ISIAYHYRNEWPLLIVTPSSLRLVWADSIEKFFPQIPSSDINLVMNGKCG---------- 179
Query: 266 SNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA--QAKRTAATLPI 323
L+GL NIISYD+V ++++ FK+V+ DE H++K +++R+ ++ I
Sbjct: 180 --------LNGLINIISYDLVTTKLDVILKKGFKVVVLDECHYIKQNVFRSQRSKSSCDI 231
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG--GVFGI-YQGAS 380
+ +A+ +LLSGTPALSRPIEL+ Q+ + P+ + + +Y RYC + I G S
Sbjct: 232 LSRAKRTILLSGTPALSRPIELYNQINCIKPN-FMSWMDYAYRYCAAYKDRYSINTSGFS 290
Query: 381 NHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK---DMRQIYALFRELEVVK 437
N +EL NL T MIRRLK +VL +LP KRR+++ + + +K D++Q R+ V
Sbjct: 291 NTKEL-NLFLNTFMIRRLKDEVLTELPAKRRERITVKLDKKRLKDIKQTVEKIRQHSKVM 349
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLE---TVIEAGCKFLIFAH 494
G S + ++ ++ K+ D+ K+ A+ +L+ T KFLIFAH
Sbjct: 350 GD--GGVDNRTAMSARGSKSSMFLKLLRDTGLYKLSAINQFLKDKLTDAPPDQKFLIFAH 407
Query: 495 HQPMLDAIHQLFLK-----KKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGG 549
H+ +++ I + K +K+ I I G T +R LV FQ + AVLS+ A G
Sbjct: 408 HKGVIEGICNMLRKIKIDKEKLDFITIVGSTQAQNRNELVNHFQSNPKCRIAVLSITAAG 467
Query: 550 VGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRS 609
GLTLTAA+ VIFAEL WTPG L QAEDRAHR GQ SSV V YL+ TVD+ +W++V S
Sbjct: 468 TGLTLTAATCVIFAELLWTPGVLFQAEDRAHRYGQTSSVLVQYLIGMGTVDESIWNLVES 527
Query: 610 KLENLGQ 616
K LG+
Sbjct: 528 KKNLLGK 534
>gi|237842313|ref|XP_002370454.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii
ME49]
gi|211968118|gb|EEB03314.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii
ME49]
gi|221502587|gb|EEE28307.1| helicase, putative [Toxoplasma gondii VEG]
Length = 1231
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 189/481 (39%), Positives = 284/481 (59%), Gaps = 41/481 (8%)
Query: 173 KLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWA 232
+L PFQ +G RF +Q GR+L+ DEMGLGKT+QA+A+A + WP L++ PSS+R W
Sbjct: 628 ELKPFQLEGYRFGIQRNGRVLVGDEMGLGKTLQALAIAAFYHKEWPFLVICPSSIRFQWR 687
Query: 233 AMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNI 292
+WL SE++V+ +V S + IP IISYD++ K +
Sbjct: 688 DQALRWL----SELLVL---------DEICLVKSG-RAEIPGRTKMVIISYDMITKQKKF 733
Query: 293 LMSSNF-----KIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFK 347
++ K+VI DESH+LKN QAKRT A P++K A+ A+LLSGTPAL+RP+ELF+
Sbjct: 734 MVPYQASLLWKKVVICDESHYLKNFQAKRTQAICPLLKNAKRAILLSGTPALNRPVELFQ 793
Query: 348 QLEALYPDVYKNVHEYGNRYCKGGVFGI------YQGASNHEELHNLMKATVMIRRLKKD 401
Q +AL PD+ E+ +RY V+ Y+G + EELH L+K TVMIRRLK+
Sbjct: 794 QFDALLPDLC-TYREFADRYSVQ-VWNPFTRHFEYEGHQHPEELHLLLKHTVMIRRLKEQ 851
Query: 402 VLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL--------- 452
V ++LP K R +V +++ K+++ I ELE +G+ ++ + + +
Sbjct: 852 VHSELPEKIRSRVPIEIPAKELKAIREKLAELEA-EGQPESILNADGAGGVERASDGLGH 910
Query: 453 KFTEKNLINKIYTDSAEAKIPAVLDYLETVI---EAGCKFLIFAHHQPMLDAIHQLFLKK 509
+ + L+ +++T + AK V ++L + + G K ++FAHH+ +LD I + +
Sbjct: 911 RSSSSPLVTELFTLTGLAKRAGVCEFLSYLFKGGDGGMKVIVFAHHRAVLDYIEEFLQAE 970
Query: 510 KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTP 569
IRIDG TP R+ LV EFQ + A+LS+ A G GL LTAA TV+FAEL W P
Sbjct: 971 AKRTIRIDGRTPQDKREQLVKEFQTSPSCQVALLSITACGHGLNLTAAGTVVFAELYWVP 1030
Query: 570 GDLIQAEDRAHRIG-QVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
G +IQAEDR+HRIG + SSV ++YL+A T+D+ V+ +++ K + LDG + L +S
Sbjct: 1031 GQMIQAEDRSHRIGTEFSSVQIHYLIAEGTLDETVFRILQRKWRLMTSTLDGEQQQLALS 1090
Query: 629 S 629
+
Sbjct: 1091 A 1091
>gi|221485219|gb|EEE23509.1| hypothetical protein TGGT1_105260 [Toxoplasma gondii GT1]
Length = 1244
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 189/481 (39%), Positives = 284/481 (59%), Gaps = 41/481 (8%)
Query: 173 KLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWA 232
+L PFQ +G RF +Q GR+L+ DEMGLGKT+QA+A+A + WP L++ PSS+R W
Sbjct: 641 ELKPFQLEGYRFGIQRNGRVLVGDEMGLGKTLQALAIAAFYHKEWPFLVICPSSIRFQWR 700
Query: 233 AMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNI 292
+WL SE++V+ +V S + IP IISYD++ K +
Sbjct: 701 DQALRWL----SELLVL---------DEICLVKSG-RAEIPGRTKMVIISYDMITKQKKF 746
Query: 293 LMSSNF-----KIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFK 347
++ K+VI DESH+LKN QAKRT A P++K A+ A+LLSGTPAL+RP+ELF+
Sbjct: 747 MVPYQASLLWKKVVICDESHYLKNFQAKRTQAICPLLKNAKRAILLSGTPALNRPVELFQ 806
Query: 348 QLEALYPDVYKNVHEYGNRYCKGGVFGI------YQGASNHEELHNLMKATVMIRRLKKD 401
Q +AL PD+ E+ +RY V+ Y+G + EELH L+K TVMIRRLK+
Sbjct: 807 QFDALLPDLC-TYREFADRYSVQ-VWNPFTRHFEYEGHQHPEELHLLLKHTVMIRRLKEQ 864
Query: 402 VLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL--------- 452
V ++LP K R +V +++ K+++ I ELE +G+ ++ + + +
Sbjct: 865 VHSELPEKIRSRVPIEIPAKELKAIREKLAELEA-EGQPESILNADGAGGVERASDGLGH 923
Query: 453 KFTEKNLINKIYTDSAEAKIPAVLDYLETVI---EAGCKFLIFAHHQPMLDAIHQLFLKK 509
+ + L+ +++T + AK V ++L + + G K ++FAHH+ +LD I + +
Sbjct: 924 RSSSSPLVTELFTLTGLAKRAGVCEFLSYLFKGGDGGMKVIVFAHHRAVLDYIEEFLQAE 983
Query: 510 KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTP 569
IRIDG TP R+ LV EFQ + A+LS+ A G GL LTAA TV+FAEL W P
Sbjct: 984 MKRTIRIDGRTPQDKREQLVKEFQTSPSCQVALLSITACGHGLNLTAAGTVVFAELYWVP 1043
Query: 570 GDLIQAEDRAHRIG-QVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
G +IQAEDR+HRIG + SSV ++YL+A T+D+ V+ +++ K + LDG + L +S
Sbjct: 1044 GQMIQAEDRSHRIGTEFSSVQIHYLIAEGTLDETVFRILQRKWRLMTSTLDGEQQQLALS 1103
Query: 629 S 629
+
Sbjct: 1104 A 1104
>gi|158296666|ref|XP_317019.4| AGAP008426-PA [Anopheles gambiae str. PEST]
gi|157014820|gb|EAA12838.4| AGAP008426-PA [Anopheles gambiae str. PEST]
Length = 722
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 214/576 (37%), Positives = 312/576 (54%), Gaps = 41/576 (7%)
Query: 76 VKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY 135
+F + T+G ++ ++ F++IP ++ + WTF + S ++ ++ ++ +
Sbjct: 125 TRFVVETNG-------FNEQMIDIFKQIPSKSYEPNTKKWTFEMKDYSLLQERIATLNPH 177
Query: 136 NVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLA 195
V + + V + AS R + I + LL FQ++GV FA+ GGR L+A
Sbjct: 178 -VVLGGIPKFVMQEFASGPKPKPSRICLNAIEPSLVESLLAFQKEGVAFAIDKGGRALIA 236
Query: 196 DEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG 255
DEMGLGKT QAIAVA ++ WP+L+ T +S R WA I+Q L P + L
Sbjct: 237 DEMGLGKTYQAIAVADFYQQDWPLLVCTTASTRDSWAHKIRQLLPHIPVHSIAAL----- 291
Query: 256 SNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK 315
N+ ++ + I SY ++ + L+ F ++I DESH LKN +AK
Sbjct: 292 -----------NSGQDYIGECRVLIASYSMMERCGEKLLDRGFGMLIFDESHTLKNFKAK 340
Query: 316 RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG--GVF 373
T + + K+A+ +LLSGTPALSRP+ELF QL+ L + + EY RYC G F
Sbjct: 341 CTTVAMALAKRARRVVLLSGTPALSRPVELFTQLQML-DGKFCSFKEYSTRYCAGKQSNF 399
Query: 374 GI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE 432
G G SN EL+ L+ MIRR K +V+++L K R+ V LD +
Sbjct: 400 GWDATGQSNLAELNLLLARKFMIRRTKDEVMSELTEKNRETVVLDPS---------YLWT 450
Query: 433 LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIF 492
E ++G + + ++ + E+ LI K Y+ +AEAK PAV YL+ V++ KF++F
Sbjct: 451 NEELEGNMSSYAADYSTSKGRQREEALI-KYYSVTAEAKAPAVCAYLKEVVKENKKFIVF 509
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGL 552
AHH MLDAI + K+ V IRIDG T R ALV FQ K +AAVLS+KA G+
Sbjct: 510 AHHHVMLDAIEKSLSKQNVDFIRIDGSTRSDLRGALVERFQSKATCRAAVLSLKACNAGI 569
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
TLTAA V+FAEL W P L QAE RAHRIGQ +V V YLLA T DDI+W +++ K E
Sbjct: 570 TLTAAHLVLFAELDWNPSTLAQAESRAHRIGQADNVTVRYLLAKKTADDIIWTMLQRKQE 629
Query: 613 NLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKR 648
L +V +E+ + SS Q +P ++ FL +
Sbjct: 630 TLSRVGLCNEDFSDASSVQ---APCNAGNIEPFLNK 662
>gi|119632034|gb|EAX11629.1| zinc finger, RAN-binding domain containing 3, isoform CRA_a [Homo
sapiens]
Length = 1030
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 182/444 (40%), Positives = 267/444 (60%), Gaps = 29/444 (6%)
Query: 193 LLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLS 251
++ADEMGLGKTIQAI + +++ WP+LI+ PSSLR W I++W+ + P EI V+
Sbjct: 1 MVADEMGLGKTIQAIGITYFYKEEWPLLIVVPSSLRYPWTEEIEKWIPELSPEEINVI-- 58
Query: 252 QLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKN 311
N++ +S+ +K + GL + ++ L N NFK+VI DESH++K+
Sbjct: 59 ----QNKTDVRRMST-SKVTVLGYGLLTADAKTLIDALNN----QNFKVVIVDESHYMKS 109
Query: 312 AQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGG 371
A R+ LPI++KA+ A+LL+GTPAL RP ELF Q+EAL+P + +Y RYC
Sbjct: 110 RNATRSRILLPIVQKARRAILLTGTPALGRPEELFMQIEALFPQKFGRWTDYAKRYCNAH 169
Query: 372 V--FGI-----YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR 424
+ FG +GASN ELH L+ + +MIRRLK +VL QLP K RQ++ D+ +
Sbjct: 170 IRYFGKRPQWDCRGASNLNELHQLL-SDIMIRRLKTEVLTQLPPKVRQRIPFDLPSAAAK 228
Query: 425 QIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIE 484
++ F E E + + E T LI +++ +A AK AV DY++ +++
Sbjct: 229 ELNTSFEEWEKIMRTPNSGAME--------TVMGLITRMFKQTAIAKAGAVKDYIKMMLQ 280
Query: 485 A-GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVL 543
KFL+FAHH ML A + ++ K IRIDG + R LV +FQ+ D + A+L
Sbjct: 281 NDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQKDPDTRVAIL 340
Query: 544 SMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIV 603
S++A G GLT TAAS V+FAEL W PG + QAEDRAHRIGQ SSVN++YL+AN T+D ++
Sbjct: 341 SIQAAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLM 400
Query: 604 WDVVRSKLENLGQVLDGHENSLEV 627
W ++ K + G L+G + ++
Sbjct: 401 WGMLNRKAQVTGSTLNGRKEKIQA 424
>gi|195114874|ref|XP_002001992.1| GI17136 [Drosophila mojavensis]
gi|193912567|gb|EDW11434.1| GI17136 [Drosophila mojavensis]
Length = 733
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 219/588 (37%), Positives = 304/588 (51%), Gaps = 43/588 (7%)
Query: 45 PQGSRTLPLSVAPAPKGSLGDFSKEQVPKLSVKFFLHTSGNIAAKFT-YDPVLVSAFRKI 103
P G L ++P + + +S K +L ++ A + Y L+ F+ I
Sbjct: 105 PNGGSKPTLCLSPEREQPQQQLASVFTKSISCKVYLISAQRFAVVPSGYHQQLIEVFKNI 164
Query: 104 PKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKY 163
P +++ + R W F + ++ + ++ NV I + P + A P R
Sbjct: 165 PSKSYDPQTRNWDFDLKDYQLLQQHVGDLKP-NVVIGTI-PKKVIDLCKQPAKPLERSVL 222
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
I + KL+PFQ +GV F++ GR+++ DEMGLGKT QA+AVA FR+ WP+LI T
Sbjct: 223 ASIEPKLAEKLMPFQEEGVCFSIAQQGRVMICDEMGLGKTYQALAVADYFREDWPLLICT 282
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
+S R WA I + L PS V + L SN +D I SY
Sbjct: 283 TASTRDAWAMHITELL---PSVPVHCIQLLTNSNM-------------YVVDAKVLITSY 326
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
+++ + + L+ F VI DESH LKN +AK TA + +A+ +LLSGTPALSRP+
Sbjct: 327 NMMERYMDKLLERKFGCVIYDESHTLKNGKAKCTAVAKRLADQAKRVILLSGTPALSRPL 386
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKK 400
ELF Q++ L + N EY +RYC G FG G SN +EL ++K M+RR K
Sbjct: 387 ELFTQIQ-LVDSRFMNFMEYTSRYCDGKQSHFGWDANGQSNLDELKVVLKLKYMLRRTKA 445
Query: 401 DVLAQLPVKRRQQVFLDVA-----EKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
+VL QL K R+ V LD A + L EL+ KGK S EE
Sbjct: 446 EVLPQLAEKNRETVVLDPALVWTNDAAKSSCTELNNELQKAKGK-----SREE------- 493
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
L+ + Y +AE K AV YL+T+I+ KF+IFAHH+ M+DAI KV IR
Sbjct: 494 ---LLLRFYARTAEVKTKAVCAYLKTLIKEKLKFIIFAHHRIMMDAICDALRSLKVSFIR 550
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
IDG T R V FQ+ +AAVLS+KA G+TLTAA ++FAEL W P L QA
Sbjct: 551 IDGQTRSDVRAGYVDTFQKSSSCRAAVLSLKACNSGITLTAAEIIVFAELDWNPSTLAQA 610
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
E RAHRIGQ V YL+AN T DD +W+++++K E L +V EN
Sbjct: 611 ESRAHRIGQTKPVVCRYLMANQTADDTIWNMLKNKQEVLSKVGIFAEN 658
>gi|119632037|gb|EAX11632.1| zinc finger, RAN-binding domain containing 3, isoform CRA_d [Homo
sapiens]
Length = 458
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 182/443 (41%), Positives = 267/443 (60%), Gaps = 29/443 (6%)
Query: 193 LLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLS 251
++ADEMGLGKTIQAI + +++ WP+LI+ PSSLR W I++W+ + P EI V+
Sbjct: 1 MVADEMGLGKTIQAIGITYFYKEEWPLLIVVPSSLRYPWTEEIEKWIPELSPEEINVI-- 58
Query: 252 QLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKN 311
N++ +S+ +K + GL + ++ L N NFK+VI DESH++K+
Sbjct: 59 ----QNKTDVRRMST-SKVTVLGYGLLTADAKTLIDALNN----QNFKVVIVDESHYMKS 109
Query: 312 AQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGG 371
A R+ LPI++KA+ A+LL+GTPAL RP ELF Q+EAL+P + +Y RYC
Sbjct: 110 RNATRSRILLPIVQKARRAILLTGTPALGRPEELFMQIEALFPQKFGRWTDYAKRYCNAH 169
Query: 372 V--FGIY-----QGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR 424
+ FG +GASN ELH L+ + +MIRRLK +VL QLP K RQ++ D+ +
Sbjct: 170 IRYFGKRPQWDCRGASNLNELHQLL-SDIMIRRLKTEVLTQLPPKVRQRIPFDLPSAAAK 228
Query: 425 QIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIE 484
++ F E E + + E T LI +++ +A AK AV DY++ +++
Sbjct: 229 ELNTSFEEWEKIMRTPNSGAME--------TVMGLITRMFKQTAIAKAGAVKDYIKMMLQ 280
Query: 485 A-GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVL 543
KFL+FAHH ML A + ++ K IRIDG + R LV +FQ+ D + A+L
Sbjct: 281 NDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQKDPDTRVAIL 340
Query: 544 SMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIV 603
S++A G GLT TAAS V+FAEL W PG + QAEDRAHRIGQ SSVN++YL+AN T+D ++
Sbjct: 341 SIQAAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLM 400
Query: 604 WDVVRSKLENLGQVLDGHENSLE 626
W ++ K + G L+G + ++
Sbjct: 401 WGMLNRKAQVTGSTLNGRKEKIQ 423
>gi|301770701|ref|XP_002920769.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
[Ailuropoda melanoleuca]
Length = 1087
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 181/443 (40%), Positives = 266/443 (60%), Gaps = 37/443 (8%)
Query: 197 EMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGG 255
EMGLGKTIQAIA+A +++ WP+LI+ PSSLR W I++W+ + P I V+
Sbjct: 75 EMGLGKTIQAIAIAYFYKEEWPLLIVVPSSLRYPWTEEIEKWIPELGPEGISVI------ 128
Query: 256 SNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK----LQNILMSSNFKIVIADESHFLKN 311
N++ +S++ ++ Y ++ K L + L + FK+VI DESH++K+
Sbjct: 129 QNKTDVGRISTSK---------VTVLGYGLLTKDAETLIDALNNQKFKVVIVDESHYMKS 179
Query: 312 AQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGG 371
A R+ LPI++KA+ A+LL+GTPAL RP ELF Q+EAL+P + EY RYC
Sbjct: 180 RNATRSKILLPIVQKAKRAILLTGTPALGRPEELFMQIEALFPQKFGTWTEYAKRYCNAH 239
Query: 372 V--FGI-----YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR 424
+ FG +GASN ELH L+ + +MIRRLK DVL QLP K RQ++ D+ +
Sbjct: 240 IRFFGKRPQWDCRGASNLNELHQLL-SDIMIRRLKTDVLTQLPPKVRQRIPFDIPSAAAK 298
Query: 425 QIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIE 484
++ F E E + + +E T LI +++ +A AK AV DY++ +++
Sbjct: 299 ELNTSFEEWEKLMRAPNSGATE--------TVMGLITRLFKQTAIAKAGAVKDYIKMMLQ 350
Query: 485 A-GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVL 543
KFL+FAHH ML A + ++ K IRIDG P + R LV +FQ+ D + A+L
Sbjct: 351 NDSLKFLVFAHHLSMLQACTEAVIENKARYIRIDGSVPSSERIHLVNQFQKDPDTRVAIL 410
Query: 544 SMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIV 603
S++A G GLT TAA+ V+FAEL W PG + QAEDRAHRIGQ +SVN++YL+AN T+D ++
Sbjct: 411 SIQAAGQGLTFTAATHVVFAELYWDPGHIKQAEDRAHRIGQCTSVNIHYLVANGTLDTLM 470
Query: 604 WDVVRSKLENLGQVLDGHENSLE 626
W ++ K + G L+G + L+
Sbjct: 471 WGMLNRKTQVTGSTLNGRKEQLQ 493
>gi|125984352|ref|XP_001355940.1| GA17662 [Drosophila pseudoobscura pseudoobscura]
gi|54644258|gb|EAL32999.1| GA17662 [Drosophila pseudoobscura pseudoobscura]
Length = 747
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 215/583 (36%), Positives = 305/583 (52%), Gaps = 66/583 (11%)
Query: 77 KFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYN 136
+F TSG Y L++ F+ IP ++++ RLW F V E ++++ +
Sbjct: 151 RFAAKTSG-------YHEKLIAVFKNIPTRSYDSTTRLWNFDVKDYQLFETHVADLKPH- 202
Query: 137 VEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKL----LPFQRDGVRFALQHGGRI 192
++ + ++ + P E+ + A IE KL +PFQ+DGV FA+ GRI
Sbjct: 203 ---VTINTIPKKILDLCRQPPKTLER--SVLASIEPKLADRLMPFQQDGVCFAIAQKGRI 257
Query: 193 LLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQ 252
++ DEMGLGKT QA+AVA F++ WP+L+ T +S R WA I + L P + VL
Sbjct: 258 MICDEMGLGKTYQALAVADYFKEDWPLLVCTTASTRDSWAVHITELLPKVPLHYIQVL-- 315
Query: 253 LGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA 312
N + D I SY+++ + + L + +I DESH LKN+
Sbjct: 316 --------------NNNQQYVGDAQVLITSYNMMERHIDKLYQRKYGFIIFDESHTLKNS 361
Query: 313 QAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG-- 370
+AK TA + +A +LLSGTPALSRP+ELF QL+ L + N E+ RYC G
Sbjct: 362 KAKCTAVAKRLTDQANRVVLLSGTPALSRPVELFTQLQ-LIDSKFLNFKEFSTRYCDGKQ 420
Query: 371 GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLD-----VAEKDMR 424
FG G SN EEL ++ MIRR K +VL QL K R+ V LD ++
Sbjct: 421 SQFGWDANGQSNLEELKVILTLKYMIRRTKSEVLPQLAEKNRETVVLDPSLIWTNDETKT 480
Query: 425 QIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIE 484
+ A+ +EL KGKI EE+ + + Y +AE K AV YL+++++
Sbjct: 481 TLDAMNKELRNSKGKIM-----EEI----------LLRFYARTAEVKARAVCAYLKSLVK 525
Query: 485 AGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLS 544
KF++FAHH+ M+DAI VH IRIDG T R +V+ FQ K + AVLS
Sbjct: 526 EQKKFIVFAHHRVMMDAISDCLSALNVHHIRIDGQTRSDLRADMVSAFQNKSSCRVAVLS 585
Query: 545 MKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVW 604
+KA G+TLTAA ++FAEL W P L QAE RAHRIGQ +V YLLAN+T DD +W
Sbjct: 586 LKACNAGITLTAAELIVFAELDWNPSTLAQAESRAHRIGQTKTVICRYLLANETADDTIW 645
Query: 605 DVVRSKLENLGQV-------LDGHENSLEVSSSQIRS--SPAK 638
++ +K + L QV G S +S++I SPAK
Sbjct: 646 KMLINKQKVLSQVGIFAENLQQGTHTSAPTTSNKIEQYFSPAK 688
>gi|195437364|ref|XP_002066610.1| GK24475 [Drosophila willistoni]
gi|194162695|gb|EDW77596.1| GK24475 [Drosophila willistoni]
Length = 734
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 225/650 (34%), Positives = 332/650 (51%), Gaps = 78/650 (12%)
Query: 21 ALQQIAQRHSKPFSDSPSYKVEALPQGSRTLPLSVAP---APKGSLGDFSKEQVPKLSV- 76
AL+ I Q S+ S + ++ + P GS L ++P P G F ++ +
Sbjct: 84 ALKAIKQTSSRELSRASAHPYQR-PNGSSKPTLRLSPEKEKPAGLAPVFVNAINCRVYLL 142
Query: 77 ---KFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEIS 133
+F +HTSG Y+ L++ F+ +P +++ R+W F + +K +S++
Sbjct: 143 SPQRFAVHTSG-------YNEQLIAVFKNMPSKSYDTTTRIWDFALTDYQLLQKHVSDLK 195
Query: 134 GYNV---------EIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRF 184
+ + ++ P+ AS P L EK L+PFQR+GV F
Sbjct: 196 PHVIIGTIPKKLLDLCQQPPVDPEWSVLASLEPSLNEK-----------LMPFQREGVCF 244
Query: 185 ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPS 244
+ GR+++ DEMGLGKT QA+A+A F+D WP+LI T +S R WA I + L
Sbjct: 245 GIAQKGRLMICDEMGLGKTYQALAIADYFKDDWPLLICTTASTRDAWARYIGELLPSVAL 304
Query: 245 EIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIAD 304
V VL N + + I SY+++ + + LM F ++I D
Sbjct: 305 HYVQVL----------------NNNQQYVGEAKVLITSYNMMERHADKLMQRKFGVLIFD 348
Query: 305 ESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYG 364
ESH LK+ +AK T + +A+ +LLSGTPALSRP+ELF QL+ + + + E+
Sbjct: 349 ESHTLKSGKAKCTTVAKRLADQAKRVVLLSGTPALSRPLELFTQLQ-MIDGKFMSFMEFT 407
Query: 365 NRYCKGGV--FGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA-- 419
RYC G FG QG SN +EL L+K M+RR K +VL +L K R+ V LD A
Sbjct: 408 TRYCDGKQTHFGWDAQGQSNLDELKVLLKLKYMVRRTKSEVLPELAEKNRETVILDPALV 467
Query: 420 ---EKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVL 476
++ + ++L+ KGK S EE+ + + Y +AE K AV
Sbjct: 468 WTNDETKTSLSDFTKQLQTSKGK-----SMEEI----------LLRFYARTAEVKTRAVC 512
Query: 477 DYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD 536
YL+T+I+ KF+IFAHH+ MLDAI KVH IRIDG T R V FQ+K
Sbjct: 513 AYLKTLIKEKIKFIIFAHHRIMLDAICDCLSTLKVHYIRIDGSTRSDLRADFVETFQKKS 572
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN 596
+ AVLS+KA G+TLTAA +IFAEL W P L QAE RAHRIGQ V YL+A+
Sbjct: 573 SCQVAVLSLKACNSGITLTAAEMIIFAELDWNPSTLAQAESRAHRIGQTKPVICRYLMAH 632
Query: 597 DTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFL 646
T DD +W+++++K + L +V EN + + + S+P K +D +
Sbjct: 633 QTADDTIWNMLKAKQDVLSKVGIFAENLQKATHT---SAPTMSKKMDEYF 679
>gi|195161250|ref|XP_002021481.1| GL26533 [Drosophila persimilis]
gi|194103281|gb|EDW25324.1| GL26533 [Drosophila persimilis]
Length = 747
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 216/593 (36%), Positives = 308/593 (51%), Gaps = 72/593 (12%)
Query: 74 LSVKFFLHTSGNIAAKFT-YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEI 132
++ ++ + AAK + Y L++ F+ IP ++++ RLW F V +
Sbjct: 140 ITCSVYMISVRRFAAKTSAYHEQLIAVFKNIPTRSYDSTTRLWNFDV----------KDY 189
Query: 133 SGYNVEIENLHPLV------QRAIASASAAPDLREKYDQIPAHIESKL----LPFQRDGV 182
+ + +L P V ++ + P E+ + A IE KL +PFQ+DGV
Sbjct: 190 QLFETHVADLKPHVTIKTIPKKILDLCRQPPKTLER--SVLASIEPKLADRLMPFQQDGV 247
Query: 183 RFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIP 242
FA+ GRI++ DEMGLGKT QA+AVA F++ WP+L+ T +S R WA I + L
Sbjct: 248 CFAIAQKGRIMICDEMGLGKTYQALAVADYFKEDWPLLVCTTASTRDSWAVHITELLPKV 307
Query: 243 PSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVI 302
P + VL N + D I SY+++ + + L + +I
Sbjct: 308 PLHYIQVL----------------NNNQQYVGDAQVLITSYNMMERHIDKLYQRKYGFII 351
Query: 303 ADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHE 362
DESH LKN++AK TA + +A+ +LLSGTPALSRP+ELF QL+ L + N E
Sbjct: 352 FDESHTLKNSKAKCTAVAKRLTDQAKRVVLLSGTPALSRPVELFTQLQ-LIDSKFLNFKE 410
Query: 363 YGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLD-- 417
+ RYC G FG G SN EEL ++ MIRR K +VL QL K R+ V LD
Sbjct: 411 FSTRYCDGKQSQFGWDANGQSNLEELKVILTLKYMIRRTKSEVLPQLAEKNRETVVLDPS 470
Query: 418 ---VAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPA 474
++ + A+ +EL KGKI EE+ + + Y +AE K A
Sbjct: 471 LIWTNDETKTTLDAMNKELRNSKGKIM-----EEI----------LLRFYARTAEVKARA 515
Query: 475 VLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE 534
V YL+++++ KF++FAHH+ M+DAI VH IRIDG T R +V+ FQ
Sbjct: 516 VCAYLKSLVKEQKKFIVFAHHRVMMDAISDCLSALNVHHIRIDGQTRSDLRADMVSAFQN 575
Query: 535 KDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLL 594
K + AVLS+KA G+TLTAA ++FAEL W P L QAE RAHRIGQ +V YLL
Sbjct: 576 KSSCRVAVLSLKACNAGITLTAAELIVFAELDWNPSTLAQAESRAHRIGQTKTVICRYLL 635
Query: 595 ANDTVDDIVWDVVRSKLENLGQV-------LDGHENSLEVSSSQIRS--SPAK 638
AN+T DD +W ++ +K + L +V G S SS++I SPAK
Sbjct: 636 ANETADDTIWKMLINKQKVLSKVGIFAENLQQGTHTSAPTSSNKIEQYFSPAK 688
>gi|281337653|gb|EFB13237.1| hypothetical protein PANDA_009544 [Ailuropoda melanoleuca]
Length = 1008
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/443 (40%), Positives = 265/443 (59%), Gaps = 37/443 (8%)
Query: 198 MGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGS 256
MGLGKTIQAIA+A +++ WP+LI+ PSSLR W I++W+ + P I V+
Sbjct: 1 MGLGKTIQAIAIAYFYKEEWPLLIVVPSSLRYPWTEEIEKWIPELGPEGISVI------Q 54
Query: 257 NRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK----LQNILMSSNFKIVIADESHFLKNA 312
N++ +S++ ++ Y ++ K L + L + FK+VI DESH++K+
Sbjct: 55 NKTDVGRISTSK---------VTVLGYGLLTKDAETLIDALNNQKFKVVIVDESHYMKSR 105
Query: 313 QAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV 372
A R+ LPI++KA+ A+LL+GTPAL RP ELF Q+EAL+P + EY RYC +
Sbjct: 106 NATRSKILLPIVQKAKRAILLTGTPALGRPEELFMQIEALFPQKFGTWTEYAKRYCNAHI 165
Query: 373 --FGI-----YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQ 425
FG +GASN ELH L+ + +MIRRLK DVL QLP K RQ++ D+ ++
Sbjct: 166 RFFGKRPQWDCRGASNLNELHQLL-SDIMIRRLKTDVLTQLPPKVRQRIPFDIPSAAAKE 224
Query: 426 IYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA 485
+ F E E + + +E T LI +++ +A AK AV DY++ +++
Sbjct: 225 LNTSFEEWEKLMRAPNSGATE--------TVMGLITRLFKQTAIAKAGAVKDYIKMMLQN 276
Query: 486 -GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLS 544
KFL+FAHH ML A + ++ K IRIDG P + R LV +FQ+ D + A+LS
Sbjct: 277 DSLKFLVFAHHLSMLQACTEAVIENKARYIRIDGSVPSSERIHLVNQFQKDPDTRVAILS 336
Query: 545 MKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVW 604
++A G GLT TAA+ V+FAEL W PG + QAEDRAHRIGQ +SVN++YL+AN T+D ++W
Sbjct: 337 IQAAGQGLTFTAATHVVFAELYWDPGHIKQAEDRAHRIGQCTSVNIHYLVANGTLDTLMW 396
Query: 605 DVVRSKLENLGQVLDGHENSLEV 627
++ K + G L+G + L+
Sbjct: 397 GMLNRKTQVTGSTLNGRKEQLQA 419
>gi|170592285|ref|XP_001900899.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
gi|158591594|gb|EDP30199.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
Length = 741
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 216/596 (36%), Positives = 319/596 (53%), Gaps = 65/596 (10%)
Query: 74 LSVKFFLHTSGNIAAKFT-YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEI 132
++V F L + +FT + ++SA + IP + K W+FP+ + + E VL +
Sbjct: 162 VNVIFKLIDTKYFQVQFTPFSQSILSALKTIPSRIYIPKITAWSFPLEDICTVENVLQSL 221
Query: 133 SGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLL----PFQRDGVRFALQH 188
++EIE V + + + + ++ + HIE L+ P+QR GV + +
Sbjct: 222 DDVSLEIEKFSDHVVKTLLTYRKS-NVGLNEPNLEKHIEKTLVDAFFPYQRRGVIYGVMR 280
Query: 189 GGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
GR+LLADEMGLGK+IQA+ +A F+ WP+LI+ PSS++ W + +L P ++
Sbjct: 281 RGRLLLADEMGLGKSIQALGIARYFKCDWPLLIICPSSVKFSWLNQFESFL--PAVGEII 338
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNIPLDG---LFNIISYDVVLKLQNILMSSNFKIVIADE 305
V+ + GS+R +PL + I+SYD+++ Q+ L+ +FK +I DE
Sbjct: 339 VIEK--GSDR-------------LPLKKTKQMVVIMSYDLMVSKQSHLIEYDFKAIIFDE 383
Query: 306 SHFLKNAQAKRTAAT-------LPII-----KKAQYALLLSGTPALSRPIELFKQLEALY 353
SH LK++ A+RT L II KKA +LL+GTPALSRP+ELF Q+ +
Sbjct: 384 SHLLKDSNAQRTKVATNISHVLLLIIDQFTQKKALRVILLTGTPALSRPVELFSQIRIID 443
Query: 354 PDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKR 410
++ N ++ RYC G G + +G +N +EL ++ TVM+RRLK DVL LP+K+
Sbjct: 444 SKMFPNYRDFAIRYCDGKQGKYSFEAKGCTNSDELAIILTGTVMLRRLKNDVLNDLPMKK 503
Query: 411 RQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEA 470
R+ V L IY +L K K + T+ + + Y ++ A
Sbjct: 504 REVVNLTDDS-----IYTNISKLREAKAAYSGAKDND-------TKHQRLVEYYYETGIA 551
Query: 471 KIPAVLDYL-ETVIEAGC---KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQ 526
K +V Y+ + G K LIFAHHQ +LD I KK + IRIDG T R
Sbjct: 552 KAKSVARYIIDHYFYDGAPKKKVLIFAHHQVVLDMISIDVAKKGLRSIRIDGTTASRLRD 611
Query: 527 ALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVS 586
FQE DDV AVLS+ A G+G+TLTAAS V+FAEL W PG L QAEDRAHR+GQ
Sbjct: 612 EQCRLFQENDDVMVAVLSITAAGIGVTLTAASVVVFAELHWNPGTLKQAEDRAHRLGQKD 671
Query: 587 SVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTL 642
SV V YL+A T DDI+W +++ KL+ L +S +SS R + + Q T+
Sbjct: 672 SVFVQYLIAKGTADDILWPLIQKKLDVL--------HSCSLSSDTYRGTDSVQTTM 719
>gi|328697302|ref|XP_001945056.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Acyrthosiphon pisum]
Length = 656
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 197/552 (35%), Positives = 304/552 (55%), Gaps = 37/552 (6%)
Query: 91 TYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY--NVEIENLHPLVQR 148
TY L+ F+ I ++ K W+F + ++++ I +V+IE L + +
Sbjct: 94 TYHQQLIDTFKTISSKNYDPKTSEWSF---LIKDHDQLMISIKPLEPDVKIEKLPHFILK 150
Query: 149 AIASASAAPDLREKYD--QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQA 206
+ K D I + L PFQ+ GV+F + GR L+AD+MGLGKT+QA
Sbjct: 151 LFKTKEDIETHWSKVDISSIGDDMLDNLYPFQKLGVQFGVSKKGRCLIADDMGLGKTLQA 210
Query: 207 IAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSS 266
I + + D +P+LI+ PSS+R W I+ L +P I +G ++S
Sbjct: 211 IGIVKYYSDNFPLLIVCPSSMRYTWEEEIR--LRMPNVPI------------TGIYVLSK 256
Query: 267 NTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKK 326
+ ++ I D I SYD++ K +++L+ F I+I DESH LK+ ++ RT L + +
Sbjct: 257 SNEQFI--DPAVVITSYDLMSKKKDMLIKYKFGIIIFDESHSLKSEKSARTRVALSLAMQ 314
Query: 327 AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG--GVFGI-YQGASNHE 383
++ +LLSGTPALSRPIEL+ Q++A+ + + EYG RYC G ++G + GA+N +
Sbjct: 315 SKQCILLSGTPALSRPIELYSQIKAITRNNFMTPVEYGVRYCNGRETIYGWDFSGATNMK 374
Query: 384 ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC 443
EL +++ MIRRLK +VL QLP K R V L ++++ +LE +
Sbjct: 375 ELKVILETQFMIRRLKSEVLKQLPQKIRNVVVL--KPENIKARSQNMDDLETMMNNKSLN 432
Query: 444 KSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
K E LK+ + + EAK+PA+ DY+ +++ G KF++FAHHQ +++ I
Sbjct: 433 KMEVRGALLKY---------FNHTGEAKLPAICDYILNLLKDGKKFIVFAHHQKVINGIC 483
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
+ + + IRIDG T R+ + +FQ +D + AVLS+ A G+TLTAA VIFA
Sbjct: 484 DVLENNETYYIRIDGKTSSEERKCVCDQFQSEDMYRVAVLSICAANSGITLTAAKLVIFA 543
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
EL W PG L QAEDRAHRIGQ +V + YLLA T DD +W +++SKL L + +N
Sbjct: 544 ELYWNPGILTQAEDRAHRIGQAETVTIQYLLAKGTADDHIWPLIQSKLSVLNKAGLSKDN 603
Query: 624 SLEVSSSQIRSS 635
+ S++ I S
Sbjct: 604 FKDDSTTVINCS 615
>gi|195401136|ref|XP_002059170.1| GJ16178 [Drosophila virilis]
gi|194156044|gb|EDW71228.1| GJ16178 [Drosophila virilis]
Length = 714
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 211/574 (36%), Positives = 303/574 (52%), Gaps = 67/574 (11%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEK---------VLSEISGYNVEI--E 140
Y L+ F+ +P ++++ R W F + ++ ++ I +E+ +
Sbjct: 143 YHEKLIEVFKNMPSKCYDSQTRNWDFDLKDYQLLQQHVGDLKPHVLIGTIPKKIIELCQQ 202
Query: 141 NLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGL 200
L PL + +AS I + KL+PFQ +GV FA+ GR+++ DEMGL
Sbjct: 203 PLKPLERSVLAS-------------IDPSLAQKLMPFQEEGVCFAIAQQGRVMICDEMGL 249
Query: 201 GKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSG 260
GKT QA+AVA F+D WP+LI T +S R WA I + L PS + V Q+ +N+
Sbjct: 250 GKTYQALAVADYFKDDWPLLICTTASTRDAWAMHITELL---PS-VSVHCIQVLTNNQVY 305
Query: 261 FTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAAT 320
T D I SY+++ + + L+ F VI DESH LKN +AK TA
Sbjct: 306 LT------------DAKILITSYNMMERYMDKLLQRKFGFVIYDESHTLKNGKAKCTAVA 353
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-YQ 377
+ +A+ +LLSGTPALSRP+ELF QL+ L + N E+ +RYC G FG
Sbjct: 354 KRLADQARRVILLSGTPALSRPLELFTQLQ-LVDSRFMNFMEFTSRYCDGKQTHFGWDAN 412
Query: 378 GASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA-----EKDMRQIYALFRE 432
G SN EEL ++ M+RR K +VL Q+ K R+ V LD A + + L E
Sbjct: 413 GQSNLEELRVILMLKYMLRRTKAEVLPQMAEKNRETVVLDPALVWSNDDAKTTCHELNSE 472
Query: 433 LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIF 492
L+ KGK S EE L+ + Y +AE K AV YL+++++ KF+IF
Sbjct: 473 LQKAKGK-----SREE----------LLLRFYARTAEVKTRAVCAYLKSLVKEPIKFIIF 517
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGL 552
AHH+ M+DAI + ++ IRIDG T R A V FQ+K KAAVLS+K+ G+
Sbjct: 518 AHHRVMMDAISDCLNELRISFIRIDGQTRSDLRAAYVDTFQKKSSCKAAVLSLKSCNAGI 577
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
TLTAA ++FAEL W P L QAE RAHRIGQ V YL+AN T DD +W+++R+K E
Sbjct: 578 TLTAAEMIVFAELDWNPSTLAQAESRAHRIGQTKPVVCRYLMANQTADDTIWNMLRNKQE 637
Query: 613 NLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFL 646
L +V EN + + ++P + ++ F
Sbjct: 638 VLSKVGVFAENLQHATHT---AAPTTSRKIEEFF 668
>gi|332019805|gb|EGI60266.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Acromyrmex
echinatior]
Length = 693
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 202/589 (34%), Positives = 320/589 (54%), Gaps = 61/589 (10%)
Query: 72 PKLSV--KFFLHTSGNIAAKFT-YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKV 128
P +SV K ++ ++ A + + + P ++ FR +P ++ K R+W F L +
Sbjct: 97 PMVSVTGKCYMISNDRFAIELSAFIPEIIDTFRTVPSRIYDLKSRIWNF---HLDDYNNL 153
Query: 129 LSEISGYNVEI------ENLHPLVQRAIASASAAPDLREKYD--QIPAHIESKLLPFQRD 180
L + + ++ E + + ++ + S + P+ YD +I + L+PFQR+
Sbjct: 154 LKTLYSKHCDLSLTRIPEAVLRIFKKNLKSDTQLPE----YDLSKIDEKLTKSLMPFQRE 209
Query: 181 GVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLN 240
G+ + + GR ++AD+MGLGKTIQA+ +A +++ WP+ I+TPSS+R W+A I ++L
Sbjct: 210 GICYGISKNGRCMIADDMGLGKTIQALGIAHYYKESWPLFIVTPSSVRYQWSAAICKFL- 268
Query: 241 IPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKI 300
PS V + Q + K I D + I SYD++++ +N +
Sbjct: 269 --PSVPVHYIHQF------------EHAKDRIEDDKI-TITSYDLLVRAENTFAKHIYGF 313
Query: 301 VIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNV 360
VI DESHFLK+ + R A I A++ +LL+GTPALSRPIEL+ Q+ P + +
Sbjct: 314 VILDESHFLKSNKTARFQAASRICTHARHIVLLTGTPALSRPIELYTQISLAIPH-FMSY 372
Query: 361 HEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLD 417
+YG RYC G +G + G+SN +EL L+K MIRRLK DVL Q+P K R+ + LD
Sbjct: 373 EDYGIRYCAGQRSAYGWDFLGSSNSQELQVLLKLNCMIRRLKADVLNQMPSKIREVIILD 432
Query: 418 VA----EKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIP 473
+K MR++ + ++ I A N + + Y+ S+ A++
Sbjct: 433 SGLVKTDKQMREMS------QQLQTNISA-----------LERHNALIQYYSQSSHARVK 475
Query: 474 AVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQ 533
AV +Y+ + + K +++ HHQ +LDAI + + IRIDG T RQ L+ +FQ
Sbjct: 476 AVRNYVTNLFKNKKKCILYGHHQIILDAICEAAESVDIVYIRIDGKTSSEQRQLLIDKFQ 535
Query: 534 EKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYL 593
E D+ AAVLS+ A G+TLTAA+ V+F EL W PG L QAEDR HRIGQ + V + YL
Sbjct: 536 ECDECLAAVLSITAVNTGVTLTAANLVVFTELFWNPGILSQAEDRVHRIGQNNIVTIQYL 595
Query: 594 LANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTL 642
+A +T DD +W ++ K + L V G + L +++ I +KQ+ L
Sbjct: 596 IAQNTADDYIWPLLNKKKDILNAV--GLKQDLSINNIDIVVQNSKQRDL 642
>gi|119632040|gb|EAX11635.1| zinc finger, RAN-binding domain containing 3, isoform CRA_f [Homo
sapiens]
Length = 1017
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/439 (40%), Positives = 262/439 (59%), Gaps = 29/439 (6%)
Query: 198 MGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGS 256
MGLGKTIQAI + +++ WP+LI+ PSSLR W I++W+ + P EI V+
Sbjct: 1 MGLGKTIQAIGITYFYKEEWPLLIVVPSSLRYPWTEEIEKWIPELSPEEINVI------Q 54
Query: 257 NRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKR 316
N++ +S+ +K + GL + ++ L N NFK+VI DESH++K+ A R
Sbjct: 55 NKTDVRRMST-SKVTVLGYGLLTADAKTLIDALNN----QNFKVVIVDESHYMKSRNATR 109
Query: 317 TAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FG 374
+ LPI++KA+ A+LL+GTPAL RP ELF Q+EAL+P + +Y RYC + FG
Sbjct: 110 SRILLPIVQKARRAILLTGTPALGRPEELFMQIEALFPQKFGRWTDYAKRYCNAHIRYFG 169
Query: 375 I-----YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYAL 429
+GASN ELH L+ + +MIRRLK +VL QLP K RQ++ D+ +++
Sbjct: 170 KRPQWDCRGASNLNELHQLL-SDIMIRRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTS 228
Query: 430 FRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCK 488
F E E + + E T LI +++ +A AK AV DY++ +++ K
Sbjct: 229 FEEWEKIMRTPNSGAME--------TVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLK 280
Query: 489 FLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAG 548
FL+FAHH ML A + ++ K IRIDG + R LV +FQ+ D + A+LS++A
Sbjct: 281 FLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAA 340
Query: 549 GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVR 608
G GLT TAAS V+FAEL W PG + QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++
Sbjct: 341 GQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLN 400
Query: 609 SKLENLGQVLDGHENSLEV 627
K + G L+G + ++
Sbjct: 401 RKAQVTGSTLNGRKEKIQA 419
>gi|119632036|gb|EAX11631.1| zinc finger, RAN-binding domain containing 3, isoform CRA_c [Homo
sapiens]
gi|119632038|gb|EAX11633.1| zinc finger, RAN-binding domain containing 3, isoform CRA_c [Homo
sapiens]
Length = 1019
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 179/439 (40%), Positives = 262/439 (59%), Gaps = 29/439 (6%)
Query: 198 MGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGS 256
MGLGKTIQAI + +++ WP+LI+ PSSLR W I++W+ + P EI V+
Sbjct: 1 MGLGKTIQAIGITYFYKEEWPLLIVVPSSLRYPWTEEIEKWIPELSPEEINVI------Q 54
Query: 257 NRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKR 316
N++ +S+ +K + GL + ++ L N NFK+VI DESH++K+ A R
Sbjct: 55 NKTDVRRMST-SKVTVLGYGLLTADAKTLIDALNN----QNFKVVIVDESHYMKSRNATR 109
Query: 317 TAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FG 374
+ LPI++KA+ A+LL+GTPAL RP ELF Q+EAL+P + +Y RYC + FG
Sbjct: 110 SRILLPIVQKARRAILLTGTPALGRPEELFMQIEALFPQKFGRWTDYAKRYCNAHIRYFG 169
Query: 375 I-----YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYAL 429
+GASN ELH L+ + +MIRRLK +VL QLP K RQ++ D+ +++
Sbjct: 170 KRPQWDCRGASNLNELHQLL-SDIMIRRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTS 228
Query: 430 FRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCK 488
F E E + + E T LI +++ +A AK AV DY++ +++ K
Sbjct: 229 FEEWEKIMRTPNSGAME--------TVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLK 280
Query: 489 FLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAG 548
FL+FAHH ML A + ++ K IRIDG + R LV +FQ+ D + A+LS++A
Sbjct: 281 FLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAA 340
Query: 549 GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVR 608
G GLT TAAS V+FAEL W PG + QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++
Sbjct: 341 GQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLN 400
Query: 609 SKLENLGQVLDGHENSLEV 627
K + G L+G + ++
Sbjct: 401 RKAQVTGSTLNGRKEKIQA 419
>gi|399216084|emb|CCF72772.1| unnamed protein product [Babesia microti strain RI]
Length = 744
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 197/578 (34%), Positives = 307/578 (53%), Gaps = 68/578 (11%)
Query: 102 KIPKATWNAKERLWTFPVPFLSSAEKVLS---EISG-----------YNVEIENLHPLVQ 147
+IP +N ++ PV L +++++ E+ G + EIE L V+
Sbjct: 201 RIPYEVYNTLDKF--NPVVRLRDNDRIVTFRAEVYGGLLDHLKQNFIFESEIEELPVFVK 258
Query: 148 RAI-------------ASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILL 194
RA S S D E +I + L PFQR GV F + G+++L
Sbjct: 259 RAFPHFCNDIRLKPYNISYSTTIDKDEVRTRIGDLLYDSLKPFQRQGVEFGISRAGKLIL 318
Query: 195 ADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLG 254
DEMGLGKT+QA+A+A + + WP+LI+ PSSLR W I WL +E+ +
Sbjct: 319 GDEMGLGKTLQALAIAAYYHNDWPLLIVCPSSLRFQWKDEILSWLPHLVNELEI------ 372
Query: 255 GSNRSGFTIVSSNTKR-NIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQ 313
+TI +S K ++ + + I+SYD ++++ L ++ V+ DESHF+KN
Sbjct: 373 ------YTIKTSKIKDLSLRIHKIL-ILSYDHLVRIGGYL--QHYACVVCDESHFIKNKN 423
Query: 314 AKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVF 373
AKRT LPI+K A +L SGTP+L+ P EL+ Q+ L D + + +++ NRY +
Sbjct: 424 AKRTKVLLPIMKNATRVILCSGTPSLNNPSELYHQIAPLV-DKFASFNDFANRYSYSSIH 482
Query: 374 GI-----YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA 428
Y G + +ELH+ + T+M+RRLKK+V LP K R ++ +D++ + +
Sbjct: 483 KFSRKVNYNGCKHGDELHSFLVRTIMLRRLKKNVQKDLPSKIRSKIIIDISMELKSKFIP 542
Query: 429 LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCK 488
L ++ K++E++ + N I +++ + EAK V DY+ ++ K
Sbjct: 543 LLAQI----------KNKEDI-----VDNNAIVELFNFTCEAKREGVCDYVNYLVGNNHK 587
Query: 489 FLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAG 548
F++FAHH MLD++ K V IRIDG T R+ LV FQ +D K A+LS+ A
Sbjct: 588 FILFAHHISMLDSLEGCVQKSGVDYIRIDGSTSQCKREDLVKRFQTCEDCKIAILSLTAC 647
Query: 549 GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVR 608
G GL LTAAS V+ EL W PG L QAEDRAHRIG +VYYL+A +T+D+++W +V
Sbjct: 648 GQGLNLTAASIVVMTELYWVPGLLFQAEDRAHRIGAQGVTHVYYLIAKNTLDEVIWRLVS 707
Query: 609 SKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFL 646
K +++ LDG + ++ + S + KQ + S+L
Sbjct: 708 RKWKDVTNTLDGKKENILMDSDD--AGNNKQSNMLSYL 743
>gi|157114821|ref|XP_001652438.1| hypothetical protein AaeL_AAEL006963 [Aedes aegypti]
gi|108877144|gb|EAT41369.1| AAEL006963-PA [Aedes aegypti]
Length = 726
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 212/556 (38%), Positives = 303/556 (54%), Gaps = 34/556 (6%)
Query: 96 LVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASA 155
L+ F+ + ++ +LWTF + + + ++ ++ + V I ++ + R +
Sbjct: 156 LIEVFKSVSSKQYDPSTKLWTFGIKDYAMVHERVTALNPH-VSIGSIPKFILRLFDGSPR 214
Query: 156 APDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRD 215
R + I + LL FQ+DGV +A+ GR L+ADEMGLGKT QA+AVA +++
Sbjct: 215 PKISRTCLNGIEPSLVDTLLDFQKDGVCYAIDKSGRALIADEMGLGKTYQALAVADFYKE 274
Query: 216 VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
WP+LI T +S R WA I+Q P + IV+ ++ D
Sbjct: 275 NWPLLICTTASTRDTWATKIRQLFRHVPL----------------YHIVTLQGSQDEIHD 318
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
I SY ++ K L+ F +I DESH LKN +AK TA + KKA+ +LLSG
Sbjct: 319 ARILISSYSLMEKCAEKLLERGFGFIIMDESHTLKNFKAKCTAVAQELAKKAKRVILLSG 378
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKAT 392
TPALSRP+ELF QL+ L + N EY RYC G FG G SN EEL+ L+ A
Sbjct: 379 TPALSRPVELFSQLQMLDRHFF-NFKEYSTRYCAGKQSKFGWDASGQSNLEELNLLLAAR 437
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL 452
MIRR K+DV++QL K R+ V LD + L + E + + + ++ +
Sbjct: 438 FMIRRTKQDVMSQLAEKNRETVILDGS---------LLSKNEETEENLNSYAADYSMSKG 488
Query: 453 KFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
+ E+ LI + Y+ +A AK PAV YL+ V++ KF+IFAHH MLDAI + K+KV
Sbjct: 489 REREEILI-QYYSATAVAKAPAVCGYLKQVLKEKQKFIIFAHHIKMLDAISKYLSKQKVD 547
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG T R +LV +FQ KD +AAVLS+KA G+TLTAA V+FAEL W P L
Sbjct: 548 FIRIDGTTRSDLRSSLVEKFQTKDSCRAAVLSLKACNAGITLTAAQLVMFAELDWNPSTL 607
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
QAE RAHRIGQ +V V YLLA T DDI+W +++ K L + +E + S S
Sbjct: 608 AQAESRAHRIGQEGTVIVRYLLAKGTADDIIWTMLQKKQNILNKAGLCNE---DFSDSTN 664
Query: 633 RSSPAKQKTLDSFLKR 648
+P ++ +L++
Sbjct: 665 VDAPCSAGNIEPYLEK 680
>gi|407037931|gb|EKE38854.1| helicase domain containing protein [Entamoeba nuttalli P19]
Length = 858
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 178/477 (37%), Positives = 281/477 (58%), Gaps = 37/477 (7%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
++Y IP+ + + + +QR GV+F L+ GR+L+ DEMGLGKT+QA+A+ + + + +L
Sbjct: 332 DRYKSIPSKLRNTMFEYQRIGVQFGLRKKGRLLIGDEMGLGKTLQALALVSAYPENEHIL 391
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
++TP+SL W IQ+WL++ P++I V + I NT+ F +
Sbjct: 392 VITPNSLVYQWCDQIQRWLDVDPNDIAVYKPK---------DIEVPNTR--------FVV 434
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
ISY+ + Q + S F +VI DE HF+K +KR+ TL + KKA+ + LSGTPALS
Sbjct: 435 ISYNSMANTQGNMFSHAFPMVICDECHFIKTDSSKRSKETLDVCKKAKQVIFLSGTPALS 494
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCK--GGVFGIYQGASNHEELHNLMKATVMIRRL 398
RP+EL+ L L D+ +G RYC+ G + Y N +EL L+ TVMIRRL
Sbjct: 495 RPMELYNILSVLIKDIGTK-ESFGKRYCEETGTRYKNYLSMKNEKELKYLL-TTVMIRRL 552
Query: 399 KKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE-LEVVKGKIKACKSEEEVQSLKFTEK 457
K DVL +LP K R++V+L +K+ +RE LE +K + + ++ + F
Sbjct: 553 KNDVLKELPPKIREKVYLGELDKNE------YRECLEKMKKDLDNARGVKQKRQQVF--- 603
Query: 458 NLINKIYTDSAEAKIPAVLDYLETVIEAGCK-FLIFAHHQPMLDAIHQLFLKKKVHCIRI 516
+++ + AKIP + YL+ V+++G K ++FAHH+ +LD I +KKV IRI
Sbjct: 604 ----ELHRSTGLAKIPLIQAYLDDVLDSGIKKVVVFAHHRDVLDGIVYNLQRKKVQFIRI 659
Query: 517 DGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAE 576
DG T +++ LV F++ D+ + AVLS+ A GL A+ IFAE+++ PG+++QAE
Sbjct: 660 DGETKSENKKELVDIFRDDDNCRVAVLSILAANCGLEFQKAALCIFAEMTFVPGEMLQAE 719
Query: 577 DRAHRIG-QVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
DR HRIG Q SV + YL+AN + D+ +W+ + KL+ +G+VLDG L+ + ++
Sbjct: 720 DRVHRIGQQADSVKIEYLIANKSYDEQIWNTIEKKLDVVGKVLDGKSRELDHCTKEV 776
>gi|432850159|ref|XP_004066741.1| PREDICTED: DNA annealing helicase and endonuclease ZRANB3-like
[Oryzias latipes]
Length = 1053
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 187/448 (41%), Positives = 268/448 (59%), Gaps = 29/448 (6%)
Query: 191 RILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVV 249
+ ++ADEMGLGKT+QAIAVA +R WP+L++ PSSL+ W +++W+ + P +I +V
Sbjct: 14 KCMIADEMGLGKTVQAIAVAYAYRQEWPLLVVVPSSLKYPWIEELERWIPELQPGDINLV 73
Query: 250 LSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFL 309
N+S T + S +K + GL + +V L F +V+ DESH+L
Sbjct: 74 ------ENKSQTTGICS-SKVTVLGYGLLTTDARPLV----EALTRQRFSVVVVDESHYL 122
Query: 310 KNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCK 369
K+ A RT +P+I+ A A+LL+GTPAL RP ELF Q++ALYP + +Y +YC
Sbjct: 123 KSRNAARTKILVPLIQSANRAILLTGTPALGRPEELFMQIDALYPRRFGTWTDYAKKYCN 182
Query: 370 GGV--FGI-----YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKD 422
FG +GASN EELH + + +MIRRLK DVL QLP K RQ++ D+ ++
Sbjct: 183 AHYRYFGPRRQWDCRGASNLEELHRRL-SQIMIRRLKADVLTQLPPKIRQRIPFDLPKEA 241
Query: 423 MRQIYALFRELE-VVKGKIKACKSEEEVQSLKFTE-KNLINKIYTDSAEAKIPAVLDYLE 480
++ A F E E ++KG V FTE +L+ ++Y +A AK AV DY++
Sbjct: 242 AKEAAASFAEWERLMKGLGSG------VADNPFTEVMSLVTQMYKQTAIAKAGAVKDYIK 295
Query: 481 TVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
++EA KFL+F HH ML A + ++ K IRIDG P + R LV +FQ +++
Sbjct: 296 MMLEAEQLKFLVFGHHLTMLQACTEAAIEAKAGYIRIDGSVPASERNQLVHKFQNDPEIR 355
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
A+LS++A G GLT TAAS V+FAEL W PG + QAEDRAHRIGQ SSVNV+YL+A T
Sbjct: 356 VAILSIQAAGQGLTFTAASHVVFAELYWNPGHIKQAEDRAHRIGQTSSVNVHYLIAKGTF 415
Query: 600 DDIVWDVVRSKLENLGQVLDGHENSLEV 627
D ++W ++ K G L+G + L+
Sbjct: 416 DTVMWSMLNRKETVTGSTLNGRKEYLKA 443
>gi|67479899|ref|XP_655331.1| helicase [Entamoeba histolytica HM-1:IMSS]
gi|56472459|gb|EAL49943.1| helicase domain-containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449710588|gb|EMD49636.1| helicase, putative [Entamoeba histolytica KU27]
Length = 858
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 177/477 (37%), Positives = 282/477 (59%), Gaps = 37/477 (7%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
++Y+ IP+ + + + +QR GV+F L+ GR+L+ DEMGLGKT+QA+A+ + + + +L
Sbjct: 332 DRYESIPSKLRNTMFEYQRIGVQFGLRKKGRLLIGDEMGLGKTLQALALVSAYPENEHIL 391
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
++TP+SL W IQ+WL++ P++I + + I NT+ F +
Sbjct: 392 VITPNSLVYQWCDQIQRWLDVDPNDIAIYKPK---------DIEVPNTR--------FVV 434
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
ISY+ + Q + S F +VI DE HF+K +KR+ TL + KKA+ + LSGTPALS
Sbjct: 435 ISYNSMANTQGNMFSHAFPMVICDECHFIKTDSSKRSKETLDVCKKAKQVIFLSGTPALS 494
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCK--GGVFGIYQGASNHEELHNLMKATVMIRRL 398
RP+EL+ L L D+ +G RYC+ G + Y N +EL L+ TVMIRRL
Sbjct: 495 RPMELYNILSVLIKDIGTK-ESFGKRYCEETGTRYKNYLSMKNEKELKYLL-TTVMIRRL 552
Query: 399 KKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE-LEVVKGKIKACKSEEEVQSLKFTEK 457
K DVL +LP K R++V+L +K+ +RE LE +K + + ++ + F
Sbjct: 553 KHDVLKELPPKIREKVYLGELDKNE------YRECLEKMKKDLDNARGVKQKRQQVF--- 603
Query: 458 NLINKIYTDSAEAKIPAVLDYLETVIEAGCK-FLIFAHHQPMLDAIHQLFLKKKVHCIRI 516
+++ + AKIP + YL+ V+++G K ++FAHH+ +LD I +KKV IRI
Sbjct: 604 ----ELHRSTGLAKIPLIQAYLDDVLDSGIKKVVVFAHHRDVLDGIVYNLQRKKVQFIRI 659
Query: 517 DGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAE 576
DG T +++ LV F++ D+ + AVLS+ A GL A+ IFAE+++ PG+++QAE
Sbjct: 660 DGETKSENKKELVDIFRDDDNCRVAVLSILAANCGLEFQKAALCIFAEMTFVPGEMLQAE 719
Query: 577 DRAHRIG-QVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
DR HRIG Q SV + YL+AN + D+ +W+ + KL+ +G+VLDG L+ + ++
Sbjct: 720 DRIHRIGQQADSVKIEYLIANKSYDEQIWNTIEKKLDVVGKVLDGKSRELDHCTKEV 776
>gi|195035831|ref|XP_001989375.1| GH11691 [Drosophila grimshawi]
gi|193905375|gb|EDW04242.1| GH11691 [Drosophila grimshawi]
Length = 735
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 207/545 (37%), Positives = 283/545 (51%), Gaps = 65/545 (11%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNV---EIENLHPLVQR 148
Y L+ F+ IP +++++ R+W F E+ Y + + +L P V
Sbjct: 152 YHAKLIEVFKNIPSKSYDSQTRIWNF-------------ELEDYQLLQQHVGDLKPQVLL 198
Query: 149 A--------IASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGL 200
+ A R I + KL+PFQ++GV FA+ GR+++ DEMGL
Sbjct: 199 GTIPKKVIKLCQQPAKSLERSVLASIDEKLAEKLMPFQKEGVCFAIAQQGRVMICDEMGL 258
Query: 201 GKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSG 260
GKT QA+AVA FR+ WP+L+ T +S R WA I + L P V VL+
Sbjct: 259 GKTYQALAVADYFREDWPLLVCTTASTRDTWARHITELLPSVPVHCVQVLAN-------- 310
Query: 261 FTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAAT 320
D I SY+++ + + L+ F VI DESH LKN +AK TA
Sbjct: 311 ---------NQYLQDAKVLIASYNMMERSIDKLLQRKFGFVIYDESHTLKNGKAKCTAVA 361
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG--GVFGI-YQ 377
+ +A+ +LLSGTPALSRP+ELF QL+ L + E+ +RYC G FG
Sbjct: 362 KRLADQAKRVILLSGTPALSRPLELFTQLQ-LIDGRFMTFMEFTSRYCDGKQTQFGWDAN 420
Query: 378 GASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA----EKDMRQIYALFRE- 432
G SN EEL ++ M+RR K +VL QL K R+ V LD A D + F
Sbjct: 421 GQSNLEELKVILTLKYMLRRTKAEVLPQLAEKNRETVVLDPALVWTNDDAKSTCNQFNTA 480
Query: 433 LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIF 492
L+ KGK S EEV + + Y +AE K AV YL+T+++ KF+IF
Sbjct: 481 LQNAKGK-----SREEV----------LLRFYARTAEVKTRAVCAYLKTLVKEQPKFIIF 525
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGL 552
AHH+ M+DAI + KV +RIDG T R V FQ+K KAAVLS+KA G+
Sbjct: 526 AHHRVMMDAISDCLRELKVQFVRIDGRTVSDVRADYVDTFQKKSSCKAAVLSLKACNSGI 585
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
TLTAA ++FAEL W P L QAE RAHRIGQ V YL+A+ T DDI+W++++SK E
Sbjct: 586 TLTAAELIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLMAHQTADDIIWNMLKSKQE 645
Query: 613 NLGQV 617
L +V
Sbjct: 646 VLSKV 650
>gi|390354115|ref|XP_781858.3| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Strongylocentrotus purpuratus]
Length = 976
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 206/582 (35%), Positives = 311/582 (53%), Gaps = 87/582 (14%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQ 147
A Y L+ F+ IP +++ + W+F LS ++++ + E+ L PL
Sbjct: 404 ADVGYHAKLIEIFKSIPSKSYDVNTKKWSFS---LSHYDELVKAVQVLKSEVV-LKPLPN 459
Query: 148 RAIASASAAPDLREKYDQIP----AHIESKL----LPFQRDGVRFALQHGGRILLADEMG 199
+ + + ++P + +++KL +PFQ+ GV FA+ GGR L+AD+MG
Sbjct: 460 SVCLAFRSQRSGKHTTLEVPEADLSGVDTKLAQGLMPFQKKGVDFAIHRGGRALIADDMG 519
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI VA +R WP+L+++PSS+R WA +W+ ++ E+ VV S
Sbjct: 520 LGKTIQAICVACYYRTEWPILVVSPSSMRFSWAESFLKWIPSLEEYEVNVVTS------- 572
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
G VS GL N+ISYD++ + L +S FK++I DESHFLK+ + RT
Sbjct: 573 -GRESVSC---------GLVNVISYDLMARKTKALQASGFKVIIMDESHFLKSYKTARTK 622
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
A LP++K A +LLSGTPALSRP ELF+Q+ + P ++ + H++ RYC
Sbjct: 623 AALPLLKAASRVILLSGTPALSRPSELFQQISVVNPRLFPSFHDFSLRYCDA-------- 674
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKG 438
K+ ++ VK Q L A KDM +
Sbjct: 675 --------------------KQVIMDPSSVKTGNQS-LKCAAKDMEKK------------ 701
Query: 439 KIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPM 498
KS+ + LK+ ++++ AKIPA+ +Y+ + E G KFL+FAHHQ +
Sbjct: 702 -----KSDTQGTLLKY---------FSETGLAKIPALKEYVIDLAECGHKFLVFAHHQKV 747
Query: 499 LDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAS 558
+DA+ + LKKK+ IRIDG T R LV +FQ D + AVLS+ A G+TLTAAS
Sbjct: 748 MDALAEALLKKKIKIIRIDGNTSSYMRNELVEKFQTNDSYQVAVLSITACNAGITLTAAS 807
Query: 559 TVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
TV+FAEL W PG L+QAEDR HRIGQ SV V YL+A T DD +W +++ KL L +
Sbjct: 808 TVLFAELFWNPGILVQAEDRVHRIGQQESVTVRYLIAKQTADDYIWPLIQKKLSILSKAG 867
Query: 619 DGHENSLEVSSSQIRSSPAKQKTLDSFLKRCNNVDDSEHQQK 660
++ E +++++ KQK++ SF ++ +D + Q+
Sbjct: 868 LSKDDFGEADTTELKD--PKQKSILSFFEQSFFEEDDQFSQE 907
>gi|156089377|ref|XP_001612095.1| helicase [Babesia bovis T2Bo]
gi|154799349|gb|EDO08527.1| helicase conserved C-terminal domain containing protein [Babesia
bovis]
Length = 879
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/467 (38%), Positives = 270/467 (57%), Gaps = 46/467 (9%)
Query: 172 SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHW 231
++L PFQR+GV + ++ GR+L+ DEMGLGKT+QA+A++ +R WP+LI+ PSSLR W
Sbjct: 427 NQLKPFQREGVNYGIRRNGRVLIGDEMGLGKTLQALAISAFYRINWPLLIICPSSLRFQW 486
Query: 232 AAMIQQWLN--IPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKL 289
+WL + +I ++++ G T + TK I SYD L +
Sbjct: 487 REQCLRWLPHLVKSDDICMIMT--------GKTEYTDETK--------IVITSYD--LCV 528
Query: 290 QNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQL 349
N + F+ +I DESH+LKN AKRT P++K+A +LLSGTP+L+ P EL++QL
Sbjct: 529 SNRRLRHGFETIICDESHYLKNQNAKRTQFITPLLKEATRVILLSGTPSLNNPAELYEQL 588
Query: 350 EALYPDVYKNVHEYGNRYCKGGVFGI-----YQGASNHEELHNLMKATVMIRRLKKDVLA 404
L P + + + RYC+ + Y G+ + ELH + TVMIRRLK++VL
Sbjct: 589 SCLIPS-FCSSSTFVERYCEKRLHWFTKRMTYSGSQHASELHMFLVKTVMIRRLKENVLN 647
Query: 405 QLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIY 464
+LP K R +V + +A +R + + K A ++E ++
Sbjct: 648 ELPPKIRSKVPIYIAPDILRGLSKTGPAIINSKPNFNAPNTQE---------------VF 692
Query: 465 TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHC--IRIDGGTPP 522
+ EAK+ V DY+ +I++ KF+IFAHH M+DAI Q+ K HC +RIDG T
Sbjct: 693 RKTGEAKVKGVCDYVLHLIKSSVKFIIFAHHMFMMDAIEQVL--KAQHCCYMRIDGSTNA 750
Query: 523 ASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
R++ VTEFQ + A+LS+ A GVGL LT++STV+FAEL W PG +IQAEDRAHR+
Sbjct: 751 QQRESRVTEFQNNSKCRVALLSLTACGVGLNLTSSSTVVFAELHWVPGQMIQAEDRAHRM 810
Query: 583 GQVSS-VNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
G +N++YL+A ++++ +W VV K E + L+G ++L ++
Sbjct: 811 GTKHRIINIHYLIAEGSIEETMWRVVSRKWETVTATLNGEVSNLAMT 857
>gi|323455831|gb|EGB11699.1| hypothetical protein AURANDRAFT_1193, partial [Aureococcus
anophagefferens]
Length = 453
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 196/461 (42%), Positives = 261/461 (56%), Gaps = 21/461 (4%)
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+ +KLL FQR+GV F L+ GR+L+ADEMG GK+ QAI + + WP LI+ P+SLR
Sbjct: 1 MNAKLLKFQREGVAFGLRAKGRVLIADEMGCGKSAQAIRLCLHYFAEWPALIVCPASLRY 60
Query: 230 HWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK 288
WA +++WL + PSEI V G S++ + K I LF S
Sbjct: 61 TWAHELEKWLPTLAPSEISVAK---GRSDKE--AVCRKGIKFCIVTQSLFTESS-----G 110
Query: 289 LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQ 348
+ + F++V+ DESH L+ ++RT LPI+K A +LLSGTPAL+RP+ELF Q
Sbjct: 111 VAKAVEDRKFQVVVVDESHGLRTRDSQRTKLLLPIMKAAPRLVLLSGTPALARPVELFSQ 170
Query: 349 LEALYPDVYKNVHEYGNRYCK--GGVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
+ A+ D + +++ RYC G FG GASN EELH + A VM+RRLK+DVL+Q
Sbjct: 171 VHAIDGDAFGTYNKFTKRYCAPFKGRFGWDVSGASNVEELHGKL-ARVMVRRLKRDVLSQ 229
Query: 406 LPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT 465
LP KRRQ V +D A +++ R L I A +++ + L +
Sbjct: 230 LPEKRRQLVAVDAAGAALKESRDAVRALGDASAAISAASNDDAWAARGEKNVALGDAWQK 289
Query: 466 DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLF---LKKKVHCIRIDGGTPP 522
LE + G K L+FAHH +LDA+ LK RIDG TPP
Sbjct: 290 SGLAKAPAVAAYALELLANEGAKILLFAHHVAVLDALEADLVRGLKGSSAHFRIDGSTPP 349
Query: 523 ASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
A RQ LV FQ V+ A+LS+ A GVGLTLTAAS V+FAEL WTPG L+QAEDRAHRI
Sbjct: 350 AERQRLVESFQNDPKVRCALLSVTAAGVGLTLTAASAVLFAELHWTPGVLVQAEDRAHRI 409
Query: 583 GQVSSVNVYYLL---ANDTVDDIVWDVVRSKLENLGQVLDG 620
GQ SSVNV+YL+ D+VD +W + K+ +G LDG
Sbjct: 410 GQRSSVNVHYLVLKDEKDSVDMALWRSIARKVSVVGAALDG 450
>gi|167539868|ref|XP_001741391.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165894093|gb|EDR22177.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 881
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 179/470 (38%), Positives = 279/470 (59%), Gaps = 37/470 (7%)
Query: 162 KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
+Y+ IP + + + +QR GV+F L+ GR+L+ DEMGLGKT+QA+A+ + + + +LI
Sbjct: 356 RYESIPIKLRNTMFEYQRIGVQFGLRKKGRLLIGDEMGLGKTLQALALVSAYPENEHILI 415
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
+TP+SL W IQ+WL++ P++I + + I NT+ F +I
Sbjct: 416 ITPNSLVYQWCDQIQRWLDVDPNDIAIYKPK---------DIEVPNTR--------FVVI 458
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSR 341
SY+ + Q + S +F +VI DE HF+K +KR+ TL + KKA+ + LSGTPALSR
Sbjct: 459 SYNSMANTQGNMFSHSFPMVICDECHFIKTDSSKRSKETLDVCKKAKQVIFLSGTPALSR 518
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCK--GGVFGIYQGASNHEELHNLMKATVMIRRLK 399
P+EL+ L L D+ +G RYC+ G + Y N +EL L+ TVMIRRLK
Sbjct: 519 PMELYNILSVLIKDIGTK-ESFGKRYCEETGTRYKNYLSMKNEKELKYLL-TTVMIRRLK 576
Query: 400 KDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE-LEVVKGKIKACKSEEEVQSLKFTEKN 458
DVL +LP K R++V+L +K+ +RE LE +K K + + LK ++
Sbjct: 577 NDVLKELPPKIREKVYLGELDKNE------YRECLEKMK------KDLDNARGLK-QKRQ 623
Query: 459 LINKIYTDSAEAKIPAVLDYLETVIEAGCK-FLIFAHHQPMLDAIHQLFLKKKVHCIRID 517
+ +++ + AKIP + YL+ V+++G K ++FAHH+ +LD I +KKV IRID
Sbjct: 624 QVFELHRSTGLAKIPLIQAYLDDVLDSGIKKVVVFAHHRDVLDGIVYNLQRKKVQFIRID 683
Query: 518 GGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
G T +++ V F++ D+ + AVLS+ A GL A+ IFAE+++ PG+++QAED
Sbjct: 684 GETKSENKKEFVDIFRDDDNCRVAVLSILAANCGLEFQKAALCIFAEMTFVPGEMLQAED 743
Query: 578 RAHRIG-QVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
R HRIG Q SV + YL+AN + D+ +W+ + KL+ +G+VLDG L+
Sbjct: 744 RLHRIGQQADSVKIEYLIANKSYDEQIWNTIEKKLDVVGKVLDGKSRELD 793
>gi|323448244|gb|EGB04145.1| hypothetical protein AURANDRAFT_39147 [Aureococcus anophagefferens]
Length = 684
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 220/600 (36%), Positives = 305/600 (50%), Gaps = 106/600 (17%)
Query: 86 IAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIEN---- 141
I + T P V+ R P A K+ W P LS+ + V ++N
Sbjct: 114 ITCESTLPPACVTIARSTPGAV--LKDNQWELP----------LSQHVNFCVAMQNERIV 161
Query: 142 LHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLG 201
+ QR +AS + A + D IP I + L PFQ+ GV + +++ GR LLADE GLG
Sbjct: 162 CERIPQRVLASLATA-----QLD-IPRSIWNALAPFQKYGVSWIVRNNGRALLADEPGLG 215
Query: 202 KTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL----NIPPSEIVVVLSQLGGSN 257
KTIQAI A + WPVL+++PSS R HW A QWL +P I+V+ S+
Sbjct: 216 KTIQAIGAACAYYHEWPVLVVSPSSARFHWEAEFLQWLPDEDYLPRDGILVITSE----- 270
Query: 258 RSGFTIVSSNTKRNIPLDGLFNIISYDVVLK--LQNILMSSNFKIVIADESHFLKNAQAK 315
R T K + SYD+V + ++ L ++I DE H+LKN +A+
Sbjct: 271 RIAATTAVDRAK--------ILVTSYDLVHREAVRKTLTRVAPNVIICDECHYLKNGKAQ 322
Query: 316 RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI 375
RT A LPIIK ++ A+LLSGTPALSRP+E+F QL AL + + ++ RYC G
Sbjct: 323 RTKALLPIIKASRRAILLSGTPALSRPMEVFWQLHALDDKQWTDPADFNKRYCSGRRKKD 382
Query: 376 --------------YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAE- 420
Y ASN EELH L++AT+M+RR K +L QLP KRR Q + + +
Sbjct: 383 DPKDTNEDGEKKKEYSAASNLEELHTLLRATLMLRRNKASILTQLPPKRRVQRKVSIDDV 442
Query: 421 -------KDMRQIYALFRELEVVKGK---------------IK--------------ACK 444
D+ + A EL + +K A
Sbjct: 443 SLALELRSDLEEFRARASELAELSNNQKRARRKRSKRSWLGVKEDTHVTLSTTLSGYATI 502
Query: 445 SEEEVQS-------LKFTEKNLINKIYTDSAEAKIPA----VLDYLETVIEA--GCKFLI 491
E++QS + +K L+ +++ S AK+PA + D L V E K L+
Sbjct: 503 EREDLQSPEMVRKEMAAKKKALLMELFRRSGPAKLPAIERRISDLLHGVDEERFSGKMLV 562
Query: 492 FAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVG 551
FAHH+ +LD + L + + IRIDG TP RQ+ VT FQ V+ A+L + A G+
Sbjct: 563 FAHHRKVLDTLANGIL-RDIKYIRIDGTTPAKDRQSRVTTFQNDAKVRVALLGITAAGIA 621
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
LTLTAAS VIF EL WTP L+QAEDRAHRIGQ S V V YLLA+D VD+I+W +++ K+
Sbjct: 622 LTLTAASRVIFTELYWTPAALLQAEDRAHRIGQTSEVVVEYLLADDCVDEILWPLIQHKM 681
>gi|26334961|dbj|BAC31181.1| unnamed protein product [Mus musculus]
Length = 482
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 179/428 (41%), Positives = 262/428 (61%), Gaps = 33/428 (7%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAIA+A +++ WP+LI+
Sbjct: 27 DFLPDKLRTKLLPFQKDGIVFALRRDGRCMVADEMGLGKTIQAIAIAYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQ--LGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
PSSLR W +++W+ + P EI VV+++ +G S T++ + +
Sbjct: 87 PSSLRYPWIEELEKWIPELEPEEINVVMNKTDIGRIPGSRVTVLG------------YGL 134
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
++ D L + L + NF++VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL
Sbjct: 135 LTTDAE-TLLDALNTQNFRVVIVDESHYMKSRTAARSKILLPMVQKARRAILLTGTPALG 193
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATV 393
RP ELF Q+EAL+P + EY RYC V FG +GASN ELH L+ +
Sbjct: 194 RPEELFMQIEALFPQKFGTWIEYAKRYCNAHVRYFGKRRQWDCRGASNLSELHQLLN-DI 252
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL+QLP K RQ++ D+ ++++ A F E + + + E
Sbjct: 253 MIRRLKSEVLSQLPPKVRQRIPFDLPPAAVKELNASFEEWQKLMRAPNSGAME------- 305
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 306 -TVMGLITRMFKQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSR 364
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG P + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG +
Sbjct: 365 YIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHI 424
Query: 573 IQAEDRAH 580
QAEDRA
Sbjct: 425 KQAEDRAQ 432
>gi|449018941|dbj|BAM82343.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a-like [Cyanidioschyzon merolae
strain 10D]
Length = 820
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 204/485 (42%), Positives = 286/485 (58%), Gaps = 32/485 (6%)
Query: 173 KLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWA 232
+LLPFQR GV A+ GGR+LLADEMGLGKTIQAIA+A R WPVLI+ PSSLR W
Sbjct: 273 QLLPFQRTGVERAIVQGGRVLLADEMGLGKTIQAIAIAWVLRKDWPVLIVCPSSLRGAW- 331
Query: 233 AMIQQWLNIPPSEIVVVLSQLGGSN--RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQ 290
++W + +L G++ S ++ + T PL + NI+SYD+V +L
Sbjct: 332 --CREWRD-----------RLAGASLTPSDIHVLETATDAGKPLRAV-NIVSYDLVGRLA 377
Query: 291 NILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLE 350
+ + ++I DESH++K+ AKRT LP +K+ LLL+GTPALSRP ELF QL
Sbjct: 378 DAQLQ-RVGVLILDESHYIKSVDAKRTQFLLPWLKRIPRVLLLTGTPALSRPAELFTQLH 436
Query: 351 ALYPDVYKNVHEYGNRYCKGGVFGIYQ-----GASNHEELHNLMKATVMIRRLKKDVLAQ 405
L P ++ + E+ RYC G ++ GA+N ELH ++ TVMIRRLK ++L Q
Sbjct: 437 GLAPSIFSDWKEFAYRYC-GARSTPWKALDTSGATNLSELHRILTQTVMIRRLKAEILDQ 495
Query: 406 LPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT 465
LP K R +++ A Q++A+ EL + K A +++ S K L++K +
Sbjct: 496 LPRKERGVAYVEPAASTPEQLHAVLDELAATEQK--ASTGDQQAAS---KVKALMSKAFH 550
Query: 466 DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASR 525
+A AK+PAVL + G KFL+FA+H+ MLDA+ +++ IRIDG T R
Sbjct: 551 LTAVAKVPAVLAQCADIWRTGHKFLLFAYHELMLDAVEGWLREQQGTWIRIDGKTQVTER 610
Query: 526 QALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQV 585
QALV FQ+ + A+L++ A G GLTLTAA V+FAEL W PG L QAEDR HRIGQ
Sbjct: 611 QALVDRFQDDPQCRVALLALTAAGAGLTLTAAHVVLFAELYWNPGTLRQAEDRVHRIGQK 670
Query: 586 SSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGH--ENSLEVSSSQIRSSPAKQKTLD 643
SV++ YL+ ++DD +W V++KL+ L LDG + V + ++P + LD
Sbjct: 671 ESVSIRYLILPRSLDDRMWRSVQNKLDILHSSLDGKIDRERVNVVAGSAWNAP-EPGPLD 729
Query: 644 SFLKR 648
F KR
Sbjct: 730 RFFKR 734
>gi|91089449|ref|XP_967843.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270011408|gb|EFA07856.1| hypothetical protein TcasGA2_TC005426 [Tribolium castaneum]
Length = 661
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 225/642 (35%), Positives = 331/642 (51%), Gaps = 70/642 (10%)
Query: 10 SAEELDFLEREALQQIAQ-RHSKPFSDSPSYKVEALPQG-------SRTLPLSVAPAPKG 61
+ EE++ R AL+++A+ R P S + + A PQ S+ + P K
Sbjct: 4 TPEEIEQKRRLALEKLAKKRLISPQSHNLQSEKNAAPQSPFRFKDQSQACKHNAKPYDKP 63
Query: 62 SLGDFSKEQV--PKLSV----KFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLW 115
L + K+ V K S+ +F + SG + + F+ IP +N K R W
Sbjct: 64 VLSFYGKDAVVTGKTSLIKEDRFVVELSG-------FSTPAIEIFKTIPTRNYNGKTRNW 116
Query: 116 TFPVPFLSSAEKVLSEISGY--NVEIENLHPLVQRAIASASAAPDLREKYDQIP-----A 168
F V + +++++ NV +E L + + R Y I
Sbjct: 117 DFHV---RDHDALIAKLQTLRPNVLVEKLPVFILSCVNKE------RTDYSNIDLSGLDP 167
Query: 169 HIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLR 228
+ L+PFQ++GVRF + GR L+AD+MGLGKT QA+ +A +++ WP+LI+T SS++
Sbjct: 168 ELGGALMPFQQEGVRFGIDKNGRCLIADDMGLGKTFQALGIANYYKNDWPLLIVTTSSMK 227
Query: 229 LHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK 288
W I ++L P I + G + G D I+S+D++ +
Sbjct: 228 NVWEETIHRYL--PSVPIFQIQYMTSGKDYIG--------------DSRVLIVSHDMMSR 271
Query: 289 LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQ 348
+ L+ F ++I DESH LKN +AK T A + KKA+ +LLSGTPALSRP ELF Q
Sbjct: 272 YVDNLLKKQFGVLIIDESHNLKNFKAKCTKAATALAKKAKRVVLLSGTPALSRPSELFSQ 331
Query: 349 LEALYPDVYKNVHEYGNRYCKGGV--FGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
L + + N +Y RYC G FG G SN +EL ++ MIRR K++VL
Sbjct: 332 LSLIDDKFFGNFFDYSKRYCDGKSTNFGWDASGKSNLQELEIVLNRKFMIRRTKEEVLKS 391
Query: 406 LPVKRRQQVFLDVAEKDMRQIYALFRE-LEVVKGKIKACKSEEEVQSLKFTEKNLINKIY 464
LP K ++ V LDV ++ Q +E L + K + K E ++ T +
Sbjct: 392 LPNKSQEVVTLDV---NLNQFSVEDKECLNALAAKYASQKKSAEKHAILLT-------FF 441
Query: 465 TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPAS 524
+++A+ KIP+V Y+ V+++G KFL+FAHHQ ML+A+ + KK V IRIDG T
Sbjct: 442 SETAKIKIPSVCSYILQVLKSGQKFLVFAHHQIMLNAVCNVLDKKNVKYIRIDGSTTSEQ 501
Query: 525 RQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQ 584
R+ V +FQ DD AVLS+ A G+TLTAA V+FAEL W P L QAE RAHRIGQ
Sbjct: 502 RKFFVDKFQLNDDCLVAVLSITAANAGITLTAAQLVLFAELHWNPSILSQAESRAHRIGQ 561
Query: 585 VSSVNVYYLLANDTVDDIVWDVVRSK---LENLGQVLDGHEN 623
+ V + YLLA T DD +W ++++K LE +G D EN
Sbjct: 562 QNPVIIKYLLAPGTADDSIWPMLQNKQKILEEVGLSRDSFEN 603
>gi|71029760|ref|XP_764523.1| DNA helicase [Theileria parva strain Muguga]
gi|68351477|gb|EAN32240.1| DNA helicase, putative [Theileria parva]
Length = 941
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 196/588 (33%), Positives = 303/588 (51%), Gaps = 121/588 (20%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
I + S+L+PFQR GV F L GR+L+ DEMGLGKT+QA+A+A + + WP+LI+ PS
Sbjct: 360 IGDELWSQLMPFQRQGVYFGLAKNGRVLIGDEMGLGKTLQALAIAAFYNNDWPLLIICPS 419
Query: 226 SLRLHWAAMIQQWLN--IPPSEIVVVLSQLGGSNRSGFTIVSSNTKR------------- 270
SLR W WL + +I++V+S FT S K+
Sbjct: 420 SLRFQWMDQCLTWLPHLVDEYQILMVMSS------KPFTTTESKRKKSKNLFDFDDFDTY 473
Query: 271 -------------------NIPLDGLFN--IISYDVVLKLQNILMSSNFKIVIADESHFL 309
++ L ++ IISYD++++++ + FK+VI DESH+L
Sbjct: 474 YAYNNSNTTVKTKTKSKGMDLELLDMYKVVIISYDLMVRIKEL---KEFKVVICDESHYL 530
Query: 310 KNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCK 369
KN ++R+ +P++K A+ +LLSGTPAL+ P ELF+Q+ ++ P + + H + +RYCK
Sbjct: 531 KNKASQRSKRVVPVLKSAKRVILLSGTPALNFPSELFEQISSIIPG-FSSSHLFIDRYCK 589
Query: 370 GGVFGI-----YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR 424
Y + + ELH + +TVMIRRLK DVL QLP K R ++ +++ EK ++
Sbjct: 590 KRTNWFTKRIEYVDSKHTNELHLFLISTVMIRRLKNDVLTQLPPKIRSKIPIEIPEKLVK 649
Query: 425 QI------------YALFRELEVVKG------------KIKACKSEEEVQS--------- 451
ALF L+ G KIK ++ +++
Sbjct: 650 TTKVMLEKFSSLKSNALFNNLDSDSGSTPDSELGSKRPKIKIGPGKDRIENYYNVVMEHL 709
Query: 452 ---------------LKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQ 496
+K +L+ K++ + E+K V Y+E ++E KF+IFAHH
Sbjct: 710 NSFGDGDEMGYKEGDVKRAHMSLMAKLFQLTGESKTKGVCKYIEEILENQNKFIIFAHHM 769
Query: 497 PMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD------------------- 537
M+DAI KKV IRIDG T R LV FQ ++
Sbjct: 770 FMMDAIEDTLRSKKVGYIRIDGSTKMNDRAKLVNLFQNTNESTKHEGKVDKVEDEDSPDY 829
Query: 538 -VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIG-QVSSVNVYYLLA 595
V+ A+LS+ + GVGL LT++STVIFAEL W PG L+QAEDR HRIG + + +N+ YL+A
Sbjct: 830 TVRVALLSLTSCGVGLNLTSSSTVIFAELYWVPGVLLQAEDRVHRIGTKFNKININYLIA 889
Query: 596 NDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLD 643
++V++++W V+ K + + LDG +L + ++ + + +Q TLD
Sbjct: 890 QNSVEEVMWKVINKKYKTVTSTLDGETGTLSLLTNNKKKN-YEQTTLD 936
>gi|84997577|ref|XP_953510.1| DEAD-box family helicase [Theileria annulata strain Ankara]
gi|65304506|emb|CAI76885.1| DEAD-box family helicase, putative [Theileria annulata]
Length = 927
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 203/591 (34%), Positives = 300/591 (50%), Gaps = 121/591 (20%)
Query: 148 RAIASASAAPDLREKYDQ----IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKT 203
R I S +E D I + S+L+PFQR GV F L GRIL+ DEMGLGKT
Sbjct: 327 RQIMSGVQDEYTKENMDNLSKLIGEELWSQLMPFQRQGVFFGLSKNGRILIGDEMGLGKT 386
Query: 204 IQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLN--IPPSEIVVVLSQLGGSNRSGF 261
+QA+A+A ++ WP+LI+ PSSLR W WL + +I++V+S F
Sbjct: 387 LQALAIAAFYQKDWPLLIICPSSLRFQWMDQCLTWLPHLVDEYQILMVMSS------KPF 440
Query: 262 TIVSSNTKRN-----------------------------IPLDGL----FNIISYDVVLK 288
T +TKR I D L IISYD++++
Sbjct: 441 TDSGKSTKREKTMFDFDDFDTYYAYSNAKTAKSKTKSKSISFDLLDMYKVVIISYDLMVR 500
Query: 289 LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQ 348
++ + F VI DESH+LKN ++R+ +P++K A+ A+LLSGTPAL+ P ELF+Q
Sbjct: 501 IKEL---KEFNAVICDESHYLKNKSSQRSKRVVPVLKSAKRAILLSGTPALNFPSELFEQ 557
Query: 349 LEALYPDVYKNVHEYGNRYCKGGVFGI-----YQGASNHEELHNLMKATVMIRRLKKDVL 403
+ A+ P + + H + +RYCK Y + + ELH + +TVMIRRLK DVL
Sbjct: 558 IAAIIPG-FSSSHLFIDRYCKKRTNWFTKRIEYVDSKHTNELHLFLISTVMIRRLKNDVL 616
Query: 404 AQLPVKRRQQVFLDVAEKDMRQIYALFRE----------------LEVVKGK----IKAC 443
QLP K R ++ +++ EK ++ + + LE G +K
Sbjct: 617 TQLPPKIRSKIPIEIPEKLIKTTKVMLEKFPSRKGGSGSGGDKITLESEFGNSGPSVKVG 676
Query: 444 KSEEEVQSL---------------KFTEKN---------LINKIYTDSAEAKIPAVLDYL 479
S++ +++ + EK+ L++K++ + E+K V Y+
Sbjct: 677 LSKDRIENYYNVVMEHLSNFSDGDEIVEKDSDVKRAHLSLMSKLFQLTGESKTKGVCKYI 736
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQ------ 533
E ++E KF+IFAHH M+DAI KKV IRIDG T R LV FQ
Sbjct: 737 EEILENNNKFIIFAHHMFMMDAIEDTLKSKKVGYIRIDGSTKINDRARLVNLFQNNSASN 796
Query: 534 -----------EKDD-----VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
E DD V+ A+LS+ + GVGL LT++STVIFAEL W PG L+QAED
Sbjct: 797 ESKSDAKANKVEGDDSPNNGVRVALLSLTSCGVGLNLTSSSTVIFAELYWVPGVLLQAED 856
Query: 578 RAHRIG-QVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
R HRIG + + +N+ YL+A ++V++++W V+ K + + LDG +L +
Sbjct: 857 RVHRIGTKFNKININYLIAQNSVEEVMWKVINKKYKTVTSTLDGETGTLSL 907
>gi|290986627|ref|XP_002676025.1| predicted protein [Naegleria gruberi]
gi|284089625|gb|EFC43281.1| predicted protein [Naegleria gruberi]
Length = 467
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 185/490 (37%), Positives = 279/490 (56%), Gaps = 41/490 (8%)
Query: 163 YDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
+ +IP +++ LPFQ+ GV F ++ GR+L++DEMGLGKTIQ IA+AT F + WP+ I+
Sbjct: 1 WKRIPKQLQNSFLPFQKIGVEFGIKKEGRVLISDEMGLGKTIQCIAIATHFSNDWPLWIV 60
Query: 223 TPSSLRLHWAAMIQQWLN-----IPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
P SL+ +W I +W+ + S+ + Q+ ++ ++++ N L
Sbjct: 61 CPGSLKANWKKEILKWMGGQTVKVDGSDEFITSMQI--------NVIDNSSQVNKGF-SL 111
Query: 278 FNIISYDVVLKLQNIL-------MSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
NIISYD++ K NI+ +++ DESH LK+ +KR+ + +P++++A
Sbjct: 112 INIISYDLLAK-DNIISLVEKEFEKKKKGVMVCDESHLLKSLSSKRSQSLVPLLEQATRT 170
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC----KGGVFGIYQGASNHEELH 386
+L SGT +SRPIELF Q++A+ E+G RYC K Y+G+S EL+
Sbjct: 171 ILASGTSCMSRPIELFSQIKAIIGKNSIKKLEFGYRYCGLTQKPKYDSDYKGSSRLSELY 230
Query: 387 NLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSE 446
L+ T+MIRRLK+DVL +LP KRR + +L V E+D++QI + G K +
Sbjct: 231 CLLSNTIMIRRLKRDVLTELPPKRRSKYYLHVKEEDLKQING-------IGGDSKKKFYQ 283
Query: 447 EEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLF 506
++ L+ +K++I K Y +AEAKI + YL +I KFLIFAHH+ ++DAI +
Sbjct: 284 KDWGKLQ-KDKDVIAK-YVKTAEAKIDGIRSYLRKIIPKKEKFLIFAHHRRVMDAIEETD 341
Query: 507 LKKKVH-CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAEL 565
K + IRIDG T R+ L F+ ++ A+LSM G GL STV+FAEL
Sbjct: 342 DDVKTYEYIRIDGETK--DREGLAHHFRSTENCLVAILSMNVAGCGLNFVPCSTVVFAEL 399
Query: 566 SWTPGDLIQAEDRAHRIGQVSS-VNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 624
W P L Q EDR HRIGQ + V++ YLLA T+DD +WD++ K + L+G +
Sbjct: 400 CWNPALLNQCEDRCHRIGQKGAFVDITYLLAKKTLDDFMWDLLTKKADITDLALNGQKE- 458
Query: 625 LEVSSSQIRS 634
E SS RS
Sbjct: 459 -EKSSHLTRS 467
>gi|401422772|ref|XP_003875873.1| putative DNA helicase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322492113|emb|CBZ27387.1| putative DNA helicase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1087
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/454 (37%), Positives = 265/454 (58%), Gaps = 42/454 (9%)
Query: 174 LLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAA 233
L PFQRDGVRF L+ GR ++AD+MGLGKT+QAIAVA +RD WPVL++ P SL +WA
Sbjct: 178 LKPFQRDGVRFVLERHGRAMIADDMGLGKTVQAIAVAHHYRDEWPVLVVCPMSLMENWAK 237
Query: 234 MIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNIL 293
++ IP + I + L G+ + ++ + I+SY + ++N
Sbjct: 238 EFNKFCGIPFARIAI----LQGAKATATSLQA------------VAIVSYSSLKCVEN-- 279
Query: 294 MSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALY 353
++F +VI DESH++K AKR +L + + ++ +LLSGTPA+SRPIEL+ QL+A+
Sbjct: 280 --AHFNVVILDESHYIKAGAAKRAQQSLKLCRASRRVILLSGTPAMSRPIELYAQLQAIQ 337
Query: 354 PDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKR 410
P + + ++G RYC G FGI G ++ +ELH+L++ +IRR K+++ ++LP K
Sbjct: 338 PSLVPSKTQFGARYCNSFVGRFGIDLTGHAHPDELHSLLR-HFLIRRTKRELGSELPSKS 396
Query: 411 RQQVFLDVAEKDMR----QIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTD 466
RQ +++ + EK+ + QI AL R L + ++ ++ E +
Sbjct: 397 RQLLYMYITEKEKKALEKQIIALRRSLSSTSFFVGNGGADWAARAPNVFEMKMA------ 450
Query: 467 SAEAKIPAVLDYLETVIE----AGCKFLIFAHHQPMLDAIHQ----LFLKKKVHCIRIDG 518
+A AKIPAV DY+ ++E +G K ++FAHHQ M++A+ + ++ + I I G
Sbjct: 451 TARAKIPAVQDYVSGIVEQHLDSGEKLILFAHHQCMMEALRSAVEVVRPRQPIDYIYISG 510
Query: 519 GTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDR 578
TPPA R+ F+ + A+LSM++ G+G T ASTV+F EL W P +Q EDR
Sbjct: 511 DTPPAQREPAAEHFRTEATCTVAILSMQSSGIGHNFTCASTVVFTELDWNPSTHLQCEDR 570
Query: 579 AHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
HRIGQ ++ YLLA T D ++W ++++KL
Sbjct: 571 VHRIGQAHPCHIKYLLAEGTSDSVIWPLLQTKLS 604
>gi|401414014|ref|XP_003886454.1| putative SNF2 family N-terminal domain-containing protein [Neospora
caninum Liverpool]
gi|325120874|emb|CBZ56429.1| putative SNF2 family N-terminal domain-containing protein [Neospora
caninum Liverpool]
Length = 791
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 187/479 (39%), Positives = 279/479 (58%), Gaps = 59/479 (12%)
Query: 173 KLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWA 232
+L PFQ +G RF LQ GR+L+ DEMGLGKT+QA+A+A + + WP L++ PSS+R W
Sbjct: 201 ELKPFQLEGYRFGLQRNGRVLVGDEMGLGKTLQALAIAAFYHNEWPFLVICPSSIRFQWR 260
Query: 233 AMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNI 292
+WL SE++V+ +V S + IP IIS + L LQ
Sbjct: 261 DQALRWL----SELLVL---------DEICLVKSG-RAEIPGRTKMVIISRPLSLCLQ-- 304
Query: 293 LMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEAL 352
+VI DESH+LKN QAKRT A P+++ A+ A+LLSGTPAL+RP+ELF+Q +AL
Sbjct: 305 -------VVICDESHYLKNYQAKRTQAICPLLRSAKRAILLSGTPALNRPVELFQQFDAL 357
Query: 353 YPDVYKNVHEYGNRYCKGGVFGI------YQGASNHEELHNLMKATVMIRRLKKDVLAQL 406
PD+ E+ +RY V+ Y+G + EELH L+K T+MIRRLK+ V ++L
Sbjct: 358 LPDLC-TYREFADRYSV-QVWNPFTRHFEYEGHQHPEELHLLLKHTIMIRRLKEQVHSEL 415
Query: 407 PVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC------------KSEEEVQSLKF 454
P K R +V +++ K++++I ELE +G+ +A E Q +
Sbjct: 416 PRKIRSRVPIEIPAKELKEIREKMAELE-AEGRPEAFLGGDSAMSGPDPNPENTDQRVSA 474
Query: 455 TEKNLINKIYTDSAEAKIPAVLDYLETVIEAG--CKFLIFAHHQPMLDAIHQLFLK-KKV 511
+ L+ +++T + AK V ++L + ++G K ++FAHH+ +LD I + + +K
Sbjct: 475 SSSPLVVELFTLTGLAKRAGVCEFLSYLFKSGGDMKVIVFAHHRAVLDYIEEYLQQTEKK 534
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
+RIDG TP R+ LV A+LS+ A G GL LTAA TVIFAEL W PG
Sbjct: 535 QSVRIDGRTPQDKRERLV-----------ALLSITACGHGLNLTAAGTVIFAELYWVPGQ 583
Query: 572 LIQAEDRAHRIG-QVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSS 629
+IQAEDR+HRIG + SS+ ++YL+A T+D+ V+ +++ K + LDG + L ++S
Sbjct: 584 MIQAEDRSHRIGTEFSSIQIHYLIAEGTLDETVFRILQRKWRLMTCTLDGEQQQLAINS 642
>gi|403223543|dbj|BAM41673.1| uncharacterized protein TOT_040000054 [Theileria orientalis strain
Shintoku]
Length = 866
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 199/601 (33%), Positives = 303/601 (50%), Gaps = 107/601 (17%)
Query: 131 EISGY--NVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQH 188
E SGY VE E L+ + ++ +K I + KL FQ++GV F L+
Sbjct: 268 EFSGYAKEVEAEEKTKLILKREQDEYTKENMSKKESLIGKVLWEKLFSFQKEGVNFGLKK 327
Query: 189 GGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLN--IPPSEI 246
GR+L+ DEMGLGK++QA+A++ ++ WP+LI+ PSSL+ W WL + EI
Sbjct: 328 NGRVLIGDEMGLGKSLQALAISAFYQKDWPLLIICPSSLKYQWMEQCVTWLPHLVTEEEI 387
Query: 247 VVVLS--QLGGSN---------------------------RSGFTIVSSNTK-RNIPLDG 276
+++ + Q N RS + VS ++ P+
Sbjct: 388 LLIKTSKQFSKENMKVNVVRKRRKNTKQEHDESTASEEKYRSEYEGVSRGSESEGKPVKI 447
Query: 277 LFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
+ IISYD++ + + S +F+ +I DESH+LKN+ +KRT PI++ A+ +LLSGT
Sbjct: 448 V--IISYDLLARAEE---SEHFETIICDESHYLKNSSSKRTKKVCPILRSAKRVILLSGT 502
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI-----YQGASNHEELHNLMKA 391
P L+ P EL++Q+ ++ P + + RYCK Y + + +ELH + +
Sbjct: 503 PELNLPTELYEQVSSILPG-FSRASVFNERYCKKKYNYFIKKMEYADSKHTQELHQFLTS 561
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFR--------ELEVVKGKIKAC 443
TVMIRRLK DVL QLP K R ++ +++ E+ +R L E G + +
Sbjct: 562 TVMIRRLKNDVLTQLPPKIRSKIPIEIHERAIRTTKMLLDSNPRSDPVSSEGGAGTVHSL 621
Query: 444 KSE------EEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQP 497
E +E + ++K +I K++ + AK V Y+E ++E KF+IFAHH
Sbjct: 622 WEEMSKYIRKEDDEGEGSQKYMITKLFMLTGHAKTSGVCRYVEEILENNEKFIIFAHHVF 681
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF------------------------- 532
MLDAI + KKKV IRIDG T R +V F
Sbjct: 682 MLDAIEETLRKKKVGYIRIDGTTKMEERSKMVQLFQNSGAETDRGQGEEAHAREGAKSGE 741
Query: 533 ------------QEKDD----------VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPG 570
Q+++D V+ A+LS+ GVGL LT++STVIFAEL W PG
Sbjct: 742 AASAPNQQGRYRQQQEDGQSSHRQSKTVRVALLSLTTCGVGLNLTSSSTVIFAELYWVPG 801
Query: 571 DLIQAEDRAHRIG-QVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSS 629
L QAEDR HRIG + S++N+ YL+A +++D+++W V+ K + L LDG +L +SS
Sbjct: 802 VLQQAEDRVHRIGTKFSTININYLIAQNSIDELMWKVINKKYKALTSTLDGTTGNLTISS 861
Query: 630 S 630
S
Sbjct: 862 S 862
>gi|341879801|gb|EGT35736.1| hypothetical protein CAEBREN_29645 [Caenorhabditis brenneri]
Length = 675
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 203/588 (34%), Positives = 305/588 (51%), Gaps = 67/588 (11%)
Query: 72 PKLSVKFFLHTSGNIAAKF-TYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLS 130
P + VK L I +F + V +++P ++ +R WT + S+ +
Sbjct: 111 PTIGVKLKLDVGDRIKIEFYPFHSSFVDLIKQVPSRAYDPSKRTWTVSISDHSTITNIFK 170
Query: 131 EISGYNVEIENLHPLVQRAIAS--ASAAP-DLREKYDQIPAHIESKLLPFQRDGVRFALQ 187
+ VE+E + P + + I + A P DL + D P I+ KL P+Q++GV FAL+
Sbjct: 171 NATTIKVEVEGIPPNILQLINNFKPKATPNDLTQVMD--PDLIQ-KLFPYQKEGVIFALE 227
Query: 188 HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIV 247
GRILLADEMGLGK++QA+ +A ++ WP+LI+ P+S++ W I + I
Sbjct: 228 RNGRILLADEMGLGKSVQALTIARYYKSDWPLLIVCPASVKGAWKKQINTFFPI------ 281
Query: 248 VVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESH 307
+R SS+ ++ I+SY+ + +IL + +I DESH
Sbjct: 282 --------IHRIFIVDKSSDPLPDVRTSNTVAIMSYEQMALKADILKREKYATIIFDESH 333
Query: 308 FLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRY 367
LK+ +A+RT + K A + +LLSGTPAL Y
Sbjct: 334 MLKDGKARRTKVATDLSKHALHVILLSGTPAL---------------------------Y 366
Query: 368 CKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR 424
C G G +G+ +G SN EEL +M +MIRRLK DVL LP KRR+ V++ D R
Sbjct: 367 CDGKQGRWGLESKGCSNSEELAAIMSRRLMIRRLKCDVLKDLPEKRREVVYVSGPTIDAR 426
Query: 425 QIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDY-LETVI 483
+L+ KA E++ ++ ++L+ + Y+ + K AV ++ LE
Sbjct: 427 -----MDDLQ------KARADYEKINAMDRKHESLL-EFYSLTGIVKAAAVCEHILENYF 474
Query: 484 EAGC---KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
K LIFAHHQ +LD I K+K+ IRIDG TP R AL +FQ ++ +
Sbjct: 475 YPDAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHQRTALCDQFQNDENCRV 534
Query: 541 AVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
AVLS+ A GVG+TLTAAS V+FAE+ + PG L+QAEDRAHR+GQ SV V YL+A T D
Sbjct: 535 AVLSITAAGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTAD 594
Query: 601 DIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKR 648
D++W++V+ KL+ LGQV + +R + Q T+ +L++
Sbjct: 595 DVMWNMVQQKLDVLGQVNLSSDTFRTADKMHLRFNDVTQPTMSEYLQK 642
>gi|405950921|gb|EKC18876.1| Zinc finger Ran-binding domain-containing protein 3 [Crassostrea
gigas]
Length = 1211
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 169/440 (38%), Positives = 262/440 (59%), Gaps = 26/440 (5%)
Query: 198 MGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGS 256
MGLGKT+QA++VA ++ WP+LI+ PSSLR W I++W + P +I +V + G+
Sbjct: 1 MGLGKTLQALSVAYLYQSEWPLLIIVPSSLRFCWVEEIEKWFPDTSPEDIFMVQT---GN 57
Query: 257 NRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKR 316
+ SG + K I GL + + VVL+ L + F++VI DESH+++N +
Sbjct: 58 DASGI----QDAKIVIATYGLLSKATSRVVLQ---ALTNQKFQVVIVDESHYIRNIKTAS 110
Query: 317 TAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FG 374
A P+I+ A +LLSGTP+LS+P+ELF Q++A+ P+ + + Y +C + FG
Sbjct: 111 CKAIGPLIRAANRRILLSGTPSLSKPVELFSQIDAICPNKFGSWWTYTAHFCDAKIQHFG 170
Query: 375 IYQ-----GASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDM-RQIYA 428
+ GA N EEL ++ +MIRR+K DVL QLP K+RQQ+ + + + + I
Sbjct: 171 KIRKRNVDGACNLEELQKKLRDVLMIRRMKDDVLTQLPAKQRQQILFQLKDSQVSKDIQK 230
Query: 429 LFRELEVVKGKIKACKSEEEVQSL--KFTEKN---LINKIYTDSAEAKIPAVLDYLETVI 483
F+EL+ + + C+ + +Q++ + + N LI K+Y S EAKI +Y+ +
Sbjct: 231 TFQELKSSMKRDR-CQVDTVLQTVANEGSSSNTLSLIQKLYQLSGEAKIGPAREYVAMLC 289
Query: 484 E-AGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAV 542
+ KFL+FA+H+ M++ + Q ++ V +RIDG T P+ RQ V +FQ D + A+
Sbjct: 290 DNKNLKFLVFAYHRAMMNGLQQTLMEHDVKFVRIDGDTKPSDRQLYVQQFQSDPDTRVAI 349
Query: 543 LSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDI 602
LS+ A GVGLT T A+ V+FAE+ WTPG LIQ EDRAHRIGQ V+++YL+A DT+D+
Sbjct: 350 LSILAAGVGLTFTKATLVVFAEMYWTPGVLIQCEDRAHRIGQTRCVSIHYLVAKDTMDEW 409
Query: 603 VWDVVRSKLENLGQVLDGHE 622
VW + K L+G +
Sbjct: 410 VWSAICRKTIVTTTALNGQK 429
>gi|431917999|gb|ELK17228.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Pteropus alecto]
Length = 1052
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 191/475 (40%), Positives = 272/475 (57%), Gaps = 44/475 (9%)
Query: 109 NAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLVQRAIAS----ASAAP--DLRE 161
N K R W F L K++ + V++ L + A AS S P D+ E
Sbjct: 385 NVKTRKWNF---LLEEHNKLIERVRCLPQVQLNPLPKTLTLAFASQLEKTSLCPTADIPE 441
Query: 162 -KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
++ + S LLPFQR GV FA+ GGR+LLAD+MGLGKTIQAI +A +R WP+L
Sbjct: 442 ADLSRVDPKLVSSLLPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWPLL 501
Query: 221 ILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
++ PSS+R W QWL ++ P I VV+ T ++ GL N
Sbjct: 502 VVVPSSVRFTWEQAFLQWLPSLSPENINVVV-----------------TGKDRLTAGLVN 544
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
I+S+D++ KL+ L ++FK+VI DESHFLKN + R A +P++K A+ +LLSGTPA+
Sbjct: 545 IVSFDLLSKLEKQL-KTHFKVVIIDESHFLKNIKTARCRAAVPLLKIAKRVILLSGTPAM 603
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVMIR 396
SRP EL+ Q+ A+ P + H +G RYC K +G Y G+SN EL L++ VM+R
Sbjct: 604 SRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRHAWGWDYSGSSNLGELKLLLEEAVMLR 663
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTE 456
RLK DVLAQLP K+R+ V + + + +L E + K K+ + E L F
Sbjct: 664 RLKSDVLAQLPAKQRKMVVFAPGQINAKARTSLDAAAEEMTTKGKSKGQQREALILFFNR 723
Query: 457 KNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
+AEAKIP++++Y+ ++E+G KFL+FAHH+ +LDAI ++ KK+V IR
Sbjct: 724 ----------TAEAKIPSIIEYILDLLESGREKFLVFAHHKVVLDAITKVLEKKQVQHIR 773
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPG 570
IDG T A R+ L +FQ + AVLS+ A +GLT ++A V+FAEL W PG
Sbjct: 774 IDGSTSSADREDLCQQFQLSERHAVAVLSITAANMGLTFSSADLVVFAELFWNPG 828
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS--S 629
L+QAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ LG+ N E++ +
Sbjct: 909 LMQAEDRVHRIGQSSSVGIHYLVARGTADDYLWPLIQEKIKVLGEAGVSEANFSEMTEDT 968
Query: 630 SQIRSSPAKQKTLDSFLK 647
I P +Q D F K
Sbjct: 969 DYIYKDPKQQNIYDLFQK 986
>gi|398015927|ref|XP_003861152.1| DNA helicase, putative [Leishmania donovani]
gi|322499377|emb|CBZ34450.1| DNA helicase, putative [Leishmania donovani]
Length = 1102
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 180/511 (35%), Positives = 286/511 (55%), Gaps = 57/511 (11%)
Query: 173 KLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWA 232
+L PFQRDGVRF L+ GR ++AD+MGLGKT+QAIAVA +RD WPVL++ P SL +WA
Sbjct: 177 RLKPFQRDGVRFVLERHGRAMIADDMGLGKTVQAIAVAHHYRDEWPVLVVCPMSLMENWA 236
Query: 233 AMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNI 292
++ IP + I + L G+ + ++ + I+SY + +++
Sbjct: 237 KEFNKFCGIPFARIAI----LQGAKATATSLQA------------VAIVSYSSLKCVED- 279
Query: 293 LMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEAL 352
++F +VI DESH++K AKR +L + + ++ +LLSGTPA+SRPIEL+ QL+A+
Sbjct: 280 ---AHFNVVILDESHYIKAGAAKRAQQSLKLCRASRRVILLSGTPAMSRPIELYAQLQAI 336
Query: 353 YPDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVK 409
P + + ++G RYC G FGI G ++ +ELH+L++ +IRR K+++ ++LP K
Sbjct: 337 QPSLVPSKAQFGARYCNSFVGRFGIDMTGHAHPDELHSLLR-HFLIRRTKRELGSELPSK 395
Query: 410 RRQQVFLDVAEKDMR----QIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLIN--KI 463
RQ +++ + EK+ + QI AL R L + S + N ++
Sbjct: 396 SRQLLYMYITEKEKKALEKQIIALRRSLSSTSAAASSSTSSLVDNGGGDSAARAPNVFEM 455
Query: 464 YTDSAEAKIPAVLDYLETVIE----AGCKFLIFAHHQPMLDA----IHQLFLKKKVHCIR 515
+A AKIPAV DY+ ++E +G K ++FAHHQ M++A + + ++ + I
Sbjct: 456 KMATARAKIPAVQDYVSGIVEQHLDSGEKLILFAHHQCMMEALRSAVEAVRPRQPIDYIY 515
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
I G TPPA R+ F+ + A+LSM++ G+G T ASTV+F EL W P +Q
Sbjct: 516 ISGDTPPAQREPAAEHFRTEATCTVAILSMQSSGIGHNFTCASTVVFTELDWNPSTHLQC 575
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD-----GHENSL----- 625
EDR HRIGQ ++ YLLA T D ++W ++++KL + + G E L
Sbjct: 576 EDRVHRIGQAQPCHIKYLLAEGTSDSVIWPLLQTKLSVTAAMFETSNVTGAEVRLHDGAD 635
Query: 626 -------EVSSSQIRSSP--AKQKTLDSFLK 647
+V ++ S+P ++Q TLD F++
Sbjct: 636 KQNVVRRDVVAATTSSTPSASQQSTLDQFMQ 666
>gi|291391484|ref|XP_002712469.1| PREDICTED: zinc finger, RAN-binding domain containing 3
[Oryctolagus cuniculus]
Length = 1062
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 180/475 (37%), Positives = 271/475 (57%), Gaps = 61/475 (12%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
++ D +P +++KLLPFQ+DG+ FAL+ GR ++ADE K + T + V
Sbjct: 24 KQLDFLPDKLKAKLLPFQKDGITFALKRDGRCMVADE----KKKPFVKAETILGLAYVVA 79
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
IL + R I S++ V+ G+ +++++ +
Sbjct: 80 ILEHINRR------------ISTSKVTVL----------GYGLLTTDAQ----------- 106
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
L + L + NFK+VI DESH++K+ A R+ LP++++A+ A+LL+GTPAL
Sbjct: 107 -------SLIDALNNQNFKVVIVDESHYMKSRNATRSKILLPLVQRAKRAILLTGTPALG 159
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATV 393
RP ELF Q+EAL+P + +Y RYC V FG +GASN ELH L+ + +
Sbjct: 160 RPEELFMQIEALFPQKFGTWTDYAKRYCNAHVRYFGKRSQWDCRGASNLNELHQLL-SDI 218
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL QLP K RQ++ D+ +++ A F E E + +K+ S+ V
Sbjct: 219 MIRRLKTEVLTQLPPKIRQRIPFDLPSAAAKELNASFEEWEKL---MKSPNSDATV---- 271
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 272 -TVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTR 330
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG P + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG +
Sbjct: 331 YIRIDGSVPSSERIRLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHI 390
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + L+
Sbjct: 391 KQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKERLQA 445
>gi|313224277|emb|CBY20066.1| unnamed protein product [Oikopleura dioica]
Length = 817
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 181/509 (35%), Positives = 289/509 (56%), Gaps = 20/509 (3%)
Query: 113 RLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIES 172
RLW F + KV+ + + +V R + A D +P + +
Sbjct: 105 RLWVFDLDCYHDFMKVVQNARIKRLTVNPFPTIVTRYLRQKPA--DTTAVSPNVPEKLLT 162
Query: 173 KLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWA 232
L PFQR+GV ++ GG+ +LADEMGLGKTIQA+A+A +R WP+LI+ PSS++ +W
Sbjct: 163 ALYPFQREGVDQIIRRGGKAILADEMGLGKTIQALALAAHYRKDWPLLIVAPSSVKFNWL 222
Query: 233 AMIQQWLNIPPSEIVVVLSQLG---GSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKL 289
+ W+ S+ +++ G R+ +V ++ + + ++ +
Sbjct: 223 IELSNWIGEIVSKDSILVLYTGKDVAKIRNTLKVVITSYEMTTKIVNSGKHMTDTSIFSE 282
Query: 290 QNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQL 349
+N S F++VI DESH++K A A+R +T I A L LSGTPAL++PIEL Q+
Sbjct: 283 END-RKSRFRMVILDESHYIKTATAQRAKSTKLICNGAARVLCLSGTPALAKPIELHSQI 341
Query: 350 EALYPDVYKNVHEYGNRYC---KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQL 406
E + D++ N H +G RYC K Y G+ N +EL+ ++ T+MIRRLK VL L
Sbjct: 342 EVVSKDLFSNRHSFGQRYCAAYKSKYGWNYSGSDNLQELNLILSKTIMIRRLKSQVLKDL 401
Query: 407 PVKRRQQVFLDVAEKDM-RQIYALFRELEVVKGKI-KACKSEEEVQSL--KFTEKN---- 458
P K R+ +++ V + M ++ +F+ ++ + ++ K E E++ L KF E +
Sbjct: 402 PPKIRKIIYMKVTDSPMMKKCNKIFQNIQKLPAQMTKNDFKEMELEKLSDKFEEADSSPL 461
Query: 459 -LINKIYTDSAEAKIPAVLDYL-ETVIEAGCKFLIFAHHQPMLDAIHQ-LFLKKKVHCIR 515
+ NK Y + +AKI AV +YL E + K ++FAHH+ ++D++ Q + K K + I+
Sbjct: 462 TIWNKWYCATGDAKIKAVSEYLIEKLENESEKIIVFAHHRAVIDSLEQNISPKIKGNLIK 521
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
I G T R V +FQ +++K A+LS+ A +G+TLT ASTV+FAEL +TPG ++QA
Sbjct: 522 ITGSTRSDDRTTYVEQFQNNENIKCALLSITAVNMGVTLTKASTVVFAELHYTPGVMVQA 581
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVW 604
EDRAHRIG+ + VN+ YL+A +T D+ +W
Sbjct: 582 EDRAHRIGRETDVNIEYLIAKNTADEWIW 610
>gi|339898362|ref|XP_001465890.2| putative DNA helicase [Leishmania infantum JPCM5]
gi|321399531|emb|CAM68321.2| putative DNA helicase [Leishmania infantum JPCM5]
Length = 1102
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 179/511 (35%), Positives = 286/511 (55%), Gaps = 57/511 (11%)
Query: 173 KLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWA 232
+L PFQR+GVRF L+ GR ++AD+MGLGKT+QAIAVA +RD WPVL++ P SL +WA
Sbjct: 177 RLKPFQREGVRFVLERHGRAMIADDMGLGKTVQAIAVAHHYRDEWPVLVVCPMSLMENWA 236
Query: 233 AMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNI 292
++ IP + I + L G+ + ++ + I+SY + +++
Sbjct: 237 KEFNKFCGIPFARIAI----LQGAKATATSLQA------------VAIVSYSSLKCVED- 279
Query: 293 LMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEAL 352
++F +VI DESH++K AKR +L + + ++ +LLSGTPA+SRPIEL+ QL+A+
Sbjct: 280 ---AHFNVVILDESHYIKAGAAKRAQQSLKLCRASRRVILLSGTPAMSRPIELYAQLQAI 336
Query: 353 YPDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVK 409
P + + ++G RYC G FGI G ++ +ELH+L++ +IRR K+++ ++LP K
Sbjct: 337 QPSLVPSKAQFGARYCNSFVGRFGIDMTGHAHPDELHSLLR-HFLIRRTKRELGSELPSK 395
Query: 410 RRQQVFLDVAEKDMR----QIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLIN--KI 463
RQ +++ + EK+ + QI AL R L + S + N ++
Sbjct: 396 SRQLLYMYITEKEKKALEKQIIALRRSLSSTSAAASSSTSSLVDNGGGDSAARAPNVFEM 455
Query: 464 YTDSAEAKIPAVLDYLETVIE----AGCKFLIFAHHQPMLDA----IHQLFLKKKVHCIR 515
+A AKIPAV DY+ ++E +G K ++FAHHQ M++A + + ++ + I
Sbjct: 456 KMATARAKIPAVQDYVSGIVEQHLDSGEKLILFAHHQCMMEALRSAVEAVRPRQPIDYIY 515
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
I G TPPA R+ F+ + A+LSM++ G+G T ASTV+F EL W P +Q
Sbjct: 516 ISGDTPPAQREPAAEHFRTEATCTVAILSMQSSGIGHNFTCASTVVFTELDWNPSTHLQC 575
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD-----GHENSL----- 625
EDR HRIGQ ++ YLLA T D ++W ++++KL + + G E L
Sbjct: 576 EDRVHRIGQAQPCHIKYLLAEGTSDSVIWPLLQTKLSVTAAMFETSNVTGAEVRLHDGAD 635
Query: 626 -------EVSSSQIRSSP--AKQKTLDSFLK 647
+V ++ S+P ++Q TLD F++
Sbjct: 636 KQNVARRDVVAATTSSTPSASQQSTLDQFMQ 666
>gi|209881905|ref|XP_002142390.1| helicase [Cryptosporidium muris RN66]
gi|209557996|gb|EEA08041.1| helicase conserved C-terminal domain-containing protein
[Cryptosporidium muris RN66]
Length = 836
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 181/502 (36%), Positives = 282/502 (56%), Gaps = 70/502 (13%)
Query: 174 LLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAA 233
L PFQ G+ F L++ GR+L+ DEMGLGKT+QA+++ + ++ WPVLI+ PSS+R W
Sbjct: 336 LRPFQCVGILFGLKNNGRLLIGDEMGLGKTLQALSLISYYQSEWPVLIICPSSIRFQWYQ 395
Query: 234 MIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNI- 292
+WLN ++ V+L I +SN K + + IISYD++++ +
Sbjct: 396 QSIEWLNPTINKSNVIL------------IRNSNDKYHKRAKII--IISYDLLVRNEYFR 441
Query: 293 -LMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEA 351
++ F ++IADESHFLKN+ AKRT +P++ A+ A+LLSGTPAL+ P EL++Q+
Sbjct: 442 KFLNVEFNVIIADESHFLKNSMAKRTQIIIPLLHNAKRAILLSGTPALNHPTELYEQINV 501
Query: 352 LYPDVYKNVHEYGNR---------------YCKGGVFGIY-------------------- 376
+ + +++ N+ Y + +F Y
Sbjct: 502 VVNQMNNLINDKRNKKLIKGKIMNDNINRSYARCPLFLKYLDFAHRYSDVRINKFSRKKE 561
Query: 377 -QGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKD-MRQIYALFRELE 434
G+ N EELH ++ VMIRRLKK VL +LP K R +V L++ +K+ +++I + +
Sbjct: 562 FYGSRNTEELHLFLRQCVMIRRLKKQVLHELPPKLRSKVPLEIKDKNGLKRIQEILNDEN 621
Query: 435 VVKGKIKACKSEEEVQSLKFTEK---NLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFL 490
+ +E+ + +F + N+ N ++ + + KI AV +Y+E +++ KF+
Sbjct: 622 YNNNEDINKIQKEQYHNKEFDDDLNVNMCN-LHKLTCQVKIEAVQEYIEYMLDNNDDKFV 680
Query: 491 IFAHHQPMLDAIHQLFLKKKVH-----------CIRIDGGTPPASRQALVTEFQEKDDVK 539
IF HH MLDAI + +K+K + IRIDG TP R+ V EFQ + K
Sbjct: 681 IFGHHHEMLDAIETILVKRKRNKSLSEINKHFVYIRIDGKTPGNKREEYVKEFQNNINCK 740
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIG-QVSSVNVYYLLANDT 598
AVLS+ A G GL LT+A TVIFAEL W PG ++QAEDR HR+G Q S +N++YL+A +T
Sbjct: 741 VAVLSITACGQGLNLTSAGTVIFAELYWVPGFMLQAEDRCHRMGTQYSCINIHYLVAENT 800
Query: 599 VDDIVWDVVRSKLENLGQVLDG 620
+DD +W ++ K + + LDG
Sbjct: 801 LDDKMWGILYKKQKIMASTLDG 822
>gi|157870051|ref|XP_001683576.1| putative DNA helicase [Leishmania major strain Friedlin]
gi|68126642|emb|CAJ04339.1| putative DNA helicase [Leishmania major strain Friedlin]
Length = 1029
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 181/511 (35%), Positives = 284/511 (55%), Gaps = 57/511 (11%)
Query: 173 KLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWA 232
+L PFQRDGVRF L+ GR ++AD+MGLGKT+QAIAVA +RD WPVL++ P SL +WA
Sbjct: 177 RLKPFQRDGVRFVLERHGRAMIADDMGLGKTVQAIAVAHHYRDEWPVLVVCPMSLMENWA 236
Query: 233 AMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNI 292
++ IP + I + L G+ + ++ + I+SY + ++N
Sbjct: 237 KEFNKFCGIPFARIAI----LQGAKATATSLQA------------VAIVSYSSLKCVEN- 279
Query: 293 LMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEAL 352
++F +VI DESH++K AKR +L + + ++ +LLSGTPA+SRPIEL+ QL+A+
Sbjct: 280 ---AHFNVVILDESHYIKAGAAKRAQQSLKLCRASRRVILLSGTPAMSRPIELYAQLQAI 336
Query: 353 YPDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVK 409
P + + ++G RYC G FGI G ++ +ELH+L++ +IRR K ++ ++LP K
Sbjct: 337 QPSLVPSKAQFGARYCNSFVGRFGIDMTGHAHPDELHSLLR-HFLIRRTKHELGSELPSK 395
Query: 410 RRQQVFLDVAEKDMR----QIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLIN--KI 463
RQ +++ + EK+ + QI AL R L + S N ++
Sbjct: 396 SRQLLYMYITEKEKKALEKQIIALRRSLSSTSAAATSSTSSLVDNGGGDWAARAPNVFEM 455
Query: 464 YTDSAEAKIPAVLDYLETVIE----AGCKFLIFAHHQPMLDA----IHQLFLKKKVHCIR 515
+A AKIPAV DY+ ++E +G K ++FAHHQ M++A + + ++ + I
Sbjct: 456 KMATARAKIPAVQDYVSGIVEQHLDSGEKLILFAHHQCMMEALRSAVEAVRPRQPIDYIY 515
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
I G TPPA R+ F+ + A+LSM++ G+G T ASTV+F EL W P +Q
Sbjct: 516 ISGDTPPAQREPAAEHFRTEATCTVAILSMQSSGIGHNFTCASTVVFTELDWNPSTHLQC 575
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD-----GHENSL----- 625
EDR HRIGQ ++ YLLA T D ++W ++++KL + + G E L
Sbjct: 576 EDRVHRIGQAQPCHIKYLLAEGTSDSVIWPLLQTKLSVTAAMFETSKMTGAEVRLHDGAD 635
Query: 626 -------EVSSSQIRSSP--AKQKTLDSFLK 647
+V ++ S+P ++Q TLD F++
Sbjct: 636 KQKVARRDVVAATTLSTPSASQQSTLDQFMQ 666
>gi|389601384|ref|XP_001565329.2| putative DNA helicase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|322505021|emb|CAM42238.2| putative DNA helicase [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 1096
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/471 (35%), Positives = 266/471 (56%), Gaps = 44/471 (9%)
Query: 174 LLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAA 233
L PFQRDGVRF L+ GR ++AD+MGLGKT+QAIAVA +R WPVL++ P SL +WA
Sbjct: 178 LRPFQRDGVRFVLERHGRAMIADDMGLGKTVQAIAVAHHYRGEWPVLVVCPMSLMENWAK 237
Query: 234 MIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNIL 293
++ IP S I + L G+ + ++ I+SY + +++
Sbjct: 238 EFNKFCGIPFSRIAI----LQGAKATATSLQD------------VVIVSYSSLKCVEH-- 279
Query: 294 MSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALY 353
++F +VI DESH++K AKR +L + ++++ A+LLSGTPA+SRPIEL+ QL+A+
Sbjct: 280 --AHFNVVILDESHYIKAGAAKRAQHSLKLCRESRRAILLSGTPAMSRPIELYAQLQAIQ 337
Query: 354 PDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKR 410
P + ++G RYC G FGI G ++ +ELH+L++ +IRR K+++ +LP K
Sbjct: 338 PGAVPSRAQFGARYCNSFVGRFGIDLTGHAHADELHSLLRH-YLIRRTKRELGRELPSKS 396
Query: 411 RQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNL---------IN 461
RQ +++ + EK+ + AL +++ ++ + + + + + + +
Sbjct: 397 RQLLYIYITEKEKK---ALEKQIIALRHSLSSTSTAAANSAFSLVDNSAGDCAARAPNVF 453
Query: 462 KIYTDSAEAKIPAVLDYLETVIE----AGCKFLIFAHHQPMLDAIHQLFLK----KKVHC 513
++ +A AKIPAV DY+ ++E +G K ++FAHHQ M++A+ K +
Sbjct: 454 EMKMATARAKIPAVQDYVSGIVEQHLHSGEKLILFAHHQCMMEALRSAVEAVQPLKPIDY 513
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
I I G TPPA R+ F+ + A+LSM++ G G T ASTV+F EL W P +
Sbjct: 514 IYISGDTPPAQREPAAEHFRTEATCTVAILSMQSSGTGHNFTCASTVVFTELDWNPSTHL 573
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 624
Q EDR HRIGQ + YLLA T D ++W ++++KL +L+ S
Sbjct: 574 QCEDRVHRIGQAQPCRIKYLLAEGTSDSVIWPLLQAKLSVTTAMLETSNTS 624
>gi|168028268|ref|XP_001766650.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162682082|gb|EDQ68503.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 1180
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 188/542 (34%), Positives = 290/542 (53%), Gaps = 74/542 (13%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTP 224
++P ++ LLPFQ++GV+F LQ GGR L ADEMG+GKTIQAIA+A+C+++ +L++ P
Sbjct: 62 KLPPNLSKTLLPFQKEGVKFGLQRGGRCLFADEMGVGKTIQAIAMASCYKEEGSLLVICP 121
Query: 225 SSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
+SLRL WA +++WL + P ++ +V + +N N+ L + + S+
Sbjct: 122 ASLRLVWADELERWLPYLSPVDVHLVFGR------------KNNLTENMELPKVV-VTSF 168
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAK-------RTAATLPIIKKAQYALLLSGT 336
+++ +L+ ++S + +VI DE+H ++ K T A L +++ + +LL+GT
Sbjct: 169 NMLTRLRESMLSRKWGMVIVDEAHNIRCTSRKVECDEVSLTMAVLEVVQYVKRVVLLTGT 228
Query: 337 PALSRPIELFKQLEALYPDVY-KNVHEYGNRYC------------KGGVF-GIYQGASNH 382
P+LSRP ++F Q+ L+P++ KN +E+ YC K VF Y S
Sbjct: 229 PSLSRPFDIFNQINCLWPNLLGKNKYEFARNYCDRQWSPCGHSNFKFCVFPQDYSRGSRL 288
Query: 383 EELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF----RELEVVKG 438
EL+ L+K TVMIRRLK+DV+ QLP KRRQ + L +A D+++ A RE V+
Sbjct: 289 TELNVLLKQTVMIRRLKEDVMMQLPPKRRQLICLQLAPSDVKEAKAFTAANARERISVQL 348
Query: 439 KIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIP------------------------- 473
+ACK + E ++ + DS E + P
Sbjct: 349 GEEACKCGFTRKGFCDCEDENEDESHADSEEGENPLASKTSARSLTEQEVGVAKLRGFQE 408
Query: 474 -----AVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQA 527
++ E+ EA K +IFAHH +LD I K V +RIDG T P R
Sbjct: 409 WLLNNSIFADRESQDEATREKIIIFAHHLKVLDTIQTFVQSKGVEYVRIDGSTLPQDRLK 468
Query: 528 LVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSS 587
V F+ + +VK A++ ++AGGVGL +AA +V+F EL + +++QAEDRAHR GQ +S
Sbjct: 469 NVNRFRSQREVKVAIVGLQAGGVGLDFSAAQSVVFVELPKSASEMLQAEDRAHRRGQKNS 528
Query: 588 VNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSS----SQIRSSPAKQKTLD 643
VN+Y +A T DD W + LE + + +G E +LEVS S IR S + D
Sbjct: 529 VNIYIFVAKGTADDRHWQSLSRSLERVSTMTNGAETTLEVSCYLSLSIIRISYILSRCSD 588
Query: 644 SF 645
SF
Sbjct: 589 SF 590
>gi|148667868|gb|EDL00285.1| Swi/SNF related matrix associated, actin dependent regulator of
chromatin, subfamily a-like 1, isoform CRA_b [Mus
musculus]
Length = 800
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 182/493 (36%), Positives = 272/493 (55%), Gaps = 47/493 (9%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLVQRAI 150
Y ++ F+++ +++ K R W+F L K+++ V+++ L V A
Sbjct: 320 YSEAVIGLFKQMESRSYDIKTRKWSF---LLEEHNKLIARSRELKQVQLDPLPKTVTLAF 376
Query: 151 ASA--SAAPDLREKYDQ-----IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKT 203
AS +P L+ + + A + S L+PFQR+GV FA+ GR+LLAD+MGLGKT
Sbjct: 377 ASQLEKTSPKLKADVPEADLSGVDAKLVSSLMPFQREGVSFAISKRGRLLLADDMGLGKT 436
Query: 204 IQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFT 262
+QAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G
Sbjct: 437 VQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPENINVVVTGKGRLT----- 491
Query: 263 IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLP 322
GL NI+S+D++ KL+ L + FK+VI DESHFLKN + R A +P
Sbjct: 492 ------------AGLVNIVSFDLLCKLERQL-KTPFKVVIIDESHFLKNIKTARCRAAVP 538
Query: 323 IIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI---YQGA 379
I+K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC Y G+
Sbjct: 539 ILKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRLPWGWDYSGS 598
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR-QIYALFRELEVVKG 438
SN EL L++ +M+RRLK DVL+QLP K+R+ V ++ R + E+ K
Sbjct: 599 SNLGELKLLLEEAIMLRRLKSDVLSQLPAKQRKMVVVNPGRISSRAKAALDAAAKEMTKD 658
Query: 439 KIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQP 497
K K +K + + +AEAKIP V++Y+ ++++G KFL+FAHH+
Sbjct: 659 KTKQ------------QQKEALLVFFNRTAEAKIPCVVEYILDLLDSGREKFLVFAHHKV 706
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
+LDA+ + +K V IRIDG TP A R+A FQ A+LS+ A +GLT + A
Sbjct: 707 ILDAVAKELERKNVQHIRIDGSTPSADREAQCQRFQLSKGHTVALLSITAANMGLTFSTA 766
Query: 558 STVIFAELSWTPG 570
V+FAEL W PG
Sbjct: 767 DLVVFAELFWNPG 779
>gi|26346797|dbj|BAC37047.1| unnamed protein product [Mus musculus]
Length = 788
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 182/493 (36%), Positives = 272/493 (55%), Gaps = 47/493 (9%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLVQRAI 150
Y ++ F+++ +++ K R W+F L K+++ V+++ L V A
Sbjct: 308 YSEAVIGLFKQMESRSYDIKTRKWSF---LLEEHNKLIARSRELKQVQLDPLPKTVTLAF 364
Query: 151 ASA--SAAPDLREKYDQ-----IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKT 203
AS +P L+ + + A + S L+PFQR+GV FA+ GR+LLAD+MGLGKT
Sbjct: 365 ASQLEKTSPKLKADVPEADLSGVDAKLVSSLMPFQREGVSFAISKRGRLLLADDMGLGKT 424
Query: 204 IQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFT 262
+QAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G
Sbjct: 425 VQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPENINVVVTGKGRLT----- 479
Query: 263 IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLP 322
GL NI+S+D++ KL+ L + FK+VI DESHFLKN + R A +P
Sbjct: 480 ------------AGLVNIVSFDLLCKLERQL-KTPFKVVIIDESHFLKNIKTARCRAAVP 526
Query: 323 IIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI---YQGA 379
I+K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC Y G+
Sbjct: 527 ILKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRLPWGWDYSGS 586
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR-QIYALFRELEVVKG 438
SN EL L++ +M+RRLK DVL+QLP K+R+ V ++ R + E+ K
Sbjct: 587 SNLGELKLLLEEAIMLRRLKSDVLSQLPAKQRKMVVVNPGRISSRAKAALDAAAKEMTKD 646
Query: 439 KIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQP 497
K K +K + + +AEAKIP V++Y+ ++++G KFL+FAHH+
Sbjct: 647 KTKQ------------QQKEALLVFFNRTAEAKIPCVVEYILDLLDSGREKFLVFAHHKV 694
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
+LDA+ + +K V IRIDG TP A R+A FQ A+LS+ A +GLT + A
Sbjct: 695 ILDAVAKELERKNVQHIRIDGSTPSADREAQCQRFQLSKGHTVALLSITAANMGLTFSTA 754
Query: 558 STVIFAELSWTPG 570
V+FAEL W PG
Sbjct: 755 DLVVFAELFWNPG 767
>gi|440297958|gb|ELP90599.1| hypothetical protein EIN_020780 [Entamoeba invadens IP1]
Length = 816
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 178/531 (33%), Positives = 284/531 (53%), Gaps = 49/531 (9%)
Query: 122 LSSAEKVLSEISGYNVEIENLHPL---VQRAIASASAAPDLREKYDQIPAHIESKLLPFQ 178
L S + VL ++ +E N+H + V + + D+ ++++IP I L FQ
Sbjct: 254 LGSYDAVLKLLTEQKLEFLNIHKIDDWVWKIVKMPDETGDI-GRFEKIPQKIRDMLYGFQ 312
Query: 179 RDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQW 238
+GV+F L+ G+ +L D+MGLGKTIQ IA+ + + ++ PVLI+ P+ L+L W +
Sbjct: 313 TEGVKFGLKKCGKFMLGDDMGLGKTIQTIAILSAYPELRPVLIVVPNILKLQWRMQLCDV 372
Query: 239 LNIPPSEIVVVLSQ--LGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSS 296
L++ +I + G+N F I SYD V L S
Sbjct: 373 LDVSDDDIAEYDPHVMVPGTN--------------------FVITSYDSVAASNGELFSH 412
Query: 297 NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDV 356
FK V+ DE H LKN KR TL I +K ++ + +SGTPA++RP+ELF L L +
Sbjct: 413 PFKYVVCDECHLLKNQTTKRATQTLEICRKVKHVVFMSGTPAVNRPLELFPVLSCLLDTI 472
Query: 357 YK-NVHEYGNRYCKGGVFGIYQG--ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQ 413
+ + +G+RYC + Y+ S +E+ N++ VMIRRLK DVL +L K R++
Sbjct: 473 HSVGMKRFGDRYCANQTYSKYKDYTGSKYEKELNILLEKVMIRRLKIDVLKELGKKERER 532
Query: 414 VFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTE-KNLINKIYTDSAEAKI 472
V+L+ E DM C+ ++++ + E K + ++Y + AK+
Sbjct: 533 VYLE--EPDMNDTL---------------CQMKKDMTESNWNEKKGPVFELYRSTGLAKM 575
Query: 473 PAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
P+V Y+ETV+E K +IFA+H ++ + Q + KK++ +RIDG T R LV +F
Sbjct: 576 PSVCGYIETVLEKEEKIVIFAYHVDVITGLTQFLIDKKINYVRIDGSTKADERGELVEKF 635
Query: 533 QEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSS-VNVY 591
+ + + A+LS++ G+ ++A+ IFAELS+ PG +IQAEDR HRIGQ + V +
Sbjct: 636 KN-EGCRVALLSIEVANCGVEFSSAAMCIFAELSFVPGKMIQAEDRIHRIGQKAKLVRIQ 694
Query: 592 YLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTL 642
YL+A +T D+ +W + K LG+++DG + LE S S A +K L
Sbjct: 695 YLIARNTYDETLWQIFMKKTATLGKIVDGKDAVLESKESNTDSFQAVKKDL 745
>gi|384245273|gb|EIE18768.1| hypothetical protein COCSUDRAFT_49196 [Coccomyxa subellipsoidea
C-169]
Length = 966
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 182/477 (38%), Positives = 266/477 (55%), Gaps = 56/477 (11%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
IP +L FQR+GVRFAL+HGGR L+AD+MGLGKT+QAI VA CF WP+L++ PS
Sbjct: 177 IPRETWERLYEFQREGVRFALKHGGRALIADDMGLGKTVQAICVAACFHADWPLLVVCPS 236
Query: 226 SLRLHWAAMIQQWLN---IP-PSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
S+ L W ++ WL +P P+ +VV+ S + T+ + I
Sbjct: 237 SMMLTWLELLSDWLPPDLLPDPANLVVITSSKDVDKKLDLAHGPPTTRHIV-------IA 289
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSR 341
SYD KL+ +F +VI DESH LK+ +KRT Q+ L+ A
Sbjct: 290 SYDCAQKLRGY--ERHFGMVICDESHALKSPGSKRT----------QFFEHLT---AAGG 334
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI-----YQGASNHEELHNLMKATVMIR 396
PI++ + P + + E+G RYC V ++GA N EEL+ +++ V+IR
Sbjct: 335 PIDMLR------PGLMGSYDEFGERYCGAKVQVAPGKMDWRGAQNLEELNGILREHVLIR 388
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE---LEVVKGKIKACKSEEEVQSLK 453
RLKKDVL +LP R + + + I A+ +E L+++ G++ SE+E S K
Sbjct: 389 RLKKDVLHELPQMTRSRRTIPPDPDLLPMIEAVKKEMAQLDLMAGRL----SEQEYDSQK 444
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKK--- 510
+ L+ ++Y + AK+ A + +E+ + G K L+FAHH+ +LDA+ L+ +
Sbjct: 445 ---RVLLMQLYRATGPAKVKAACELIESALNQGRKLLVFAHHKGVLDALEAAVLRMRIGE 501
Query: 511 ------VHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
V +RIDG + +R V FQ + A+LS++A G G+TL AASTV+F E
Sbjct: 502 DGRSHQVGHMRIDGRSTAQARGDAVNAFQNDPHCRVALLSIRAAGAGITLHAASTVLFVE 561
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGH 621
L+WTP +L QAE RAHR+GQ V+V YLLA +VDDI+W +V SKL +G LDGH
Sbjct: 562 LAWTPSELTQAEARAHRLGQEKEVDVLYLLAPGSVDDIIWSMVNSKLRVVGNALDGH 618
>gi|302760235|ref|XP_002963540.1| hypothetical protein SELMODRAFT_80139 [Selaginella moellendorffii]
gi|300168808|gb|EFJ35411.1| hypothetical protein SELMODRAFT_80139 [Selaginella moellendorffii]
Length = 959
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/510 (35%), Positives = 284/510 (55%), Gaps = 60/510 (11%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
+P ++ LLPFQ DG+R+ L+ GGR+L+ADEMGLGKT+QAIA+A C+ + +L++ P+
Sbjct: 80 LPWKLKQYLLPFQWDGIRYGLRRGGRVLIADEMGLGKTLQAIAIAACYLNDGSLLVVCPA 139
Query: 226 SLRLHWAAMIQQWLN-IPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
SLRL WA +++WL + PS++ +V + + +++ + +ISY+
Sbjct: 140 SLRLVWAEELERWLPFLSPSDVHLVFGR-------------EDDLKDLKTPKVV-VISYN 185
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQ----AKRTAATLPIIKKAQYALLLSGTPALS 340
++ +L+ ++ ++++VI DESH ++ ++ ++ T A + + + A A+ LSGTP+LS
Sbjct: 186 MLRRLRESILRCSWEMVIVDESHNIRCSKRPTDSEETTALMEVARAAPRAVFLSGTPSLS 245
Query: 341 RPIELFKQLEALYPDVY-KNVHEYGNRYCKGG---------VFGIYQGASNHEELHNLMK 390
RP ++F Q+ AL+P + KN + + YC F YQ EEL+ L++
Sbjct: 246 RPFDIFNQVNALWPGILGKNKYNFARNYCSSSSDAAYKFHHYFQDYQRGVRLEELNILLR 305
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQ 450
VMIRRLK +L QLP KRRQ + L ++ DM + K I A E Q
Sbjct: 306 EIVMIRRLKDQILTQLPPKRRQIIRLRLSSGDMLE----------AKASIDADGGSYERQ 355
Query: 451 SLKFTEKNLINKIYTDSAEAKIPAVLDYLET-----VIEAGCKFLIFAHHQPMLDAIHQL 505
L E + AK+ V D+L V E K +IF HH +++++ +
Sbjct: 356 -LNTQEIGI----------AKLKGVTDWLSNNPFSAVKEEMQKLIIFCHHHKVMNSLQEF 404
Query: 506 FLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAEL 565
++K++ IRIDG T RQ F++KD+VK A++ + AGGVGL L+AA V+F EL
Sbjct: 405 IVRKEIEFIRIDGHTDAKDRQKATEIFRQKDEVKVAIVGVTAGGVGLDLSAARNVVFVEL 464
Query: 566 SWTPGDLI-QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 624
T +L+ QAEDRAHR GQ S+VN+Y A +T D+ W + LE + + +G E++
Sbjct: 465 PKTASELVQQAEDRAHRRGQKSAVNIYIFCAKETSDECHWQSLSKSLERVTTMTNGSEDA 524
Query: 625 ---LEVSSSQIRSSPAKQKTLDSFLKRCNN 651
LEV + ++ K S L+RC N
Sbjct: 525 IPGLEVETLMDQTESGDTKAC-SLLRRCQN 553
>gi|123467717|ref|XP_001317270.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
gi|121900000|gb|EAY05047.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
Length = 904
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 284/534 (53%), Gaps = 44/534 (8%)
Query: 109 NAKER-LWTFPV-PFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQI 166
N+K R W + +L+ + S + + ++ + V +A+++ + +
Sbjct: 398 NSKNRPYWKINIRNYLTVKSALTSAYNTFTAVLDGIPDFVIKALSNFRPTKIPMNLFQNL 457
Query: 167 PAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWP---VLILT 223
P + KLLP Q++ +++ R L+ADEMGLGKT+QA+A+A+ F +P +L++
Sbjct: 458 PKRLSEKLLPHQKESIQYVASRNYRALIADEMGLGKTLQAVAIASLFG--FPSKRILVMC 515
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
P +L W +W NI PS I ++ N P D I +Y
Sbjct: 516 PINLVEAWTDTFSEWTNISPSRINIMTK-----------------SANFP-DNPLTIATY 557
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
VV K I + NF +VIADE H N K P+I +A+ ALLLSGTP+++RP
Sbjct: 558 PVVQKSDGIFQNRNFDMVIADECHEFSNQGTKLHKQVTPLISQAKAALLLSGTPSMNRPS 617
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGIYQ--GASNHEELHNLMKATVMIRRLK 399
ELF L L PDV+++ +EY RYC GG G YQ G+S+ +EL LM+ +MIRR K
Sbjct: 618 ELFTALNLLRPDVFRSFYEYSERYCHGGYNEAGNYQANGSSHTDELKILMETLLMIRRQK 677
Query: 400 KDVLAQLPVKRRQQVFLDVAEKD-MRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKN 458
+DVL+ LP K R+ + L + M ++ L R K KI K +Q+ + ++
Sbjct: 678 EDVLSDLPPKNREHIMLLYTPSNKMTEMVELIR-----KQKIGIKKG---LQTFRSAQRG 729
Query: 459 LINKIYTDSAEAKIPAVLDYL------ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
L+ + +T ++E K+ VL ++ + + K L FAHH ML I + + +
Sbjct: 730 LVWECFTLTSEEKVEPVLHWMTSQKFRDILFCQNRKILFFAHHTVMLKGISEWLTFRNID 789
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
I I+G T +R+ L+ +F+ + + K AVL ++ G+TL AS V+FAEL + P
Sbjct: 790 HILINGETSMKNRKILLDKFKSEPECKIAVLGIETISAGVTLVEASVVVFAELMYVPATH 849
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
+QAEDR HRIGQ V++YYL A +VDD VW+++ KLE LG V+ + SL+
Sbjct: 850 LQAEDRVHRIGQTQPVDIYYLHAPGSVDDRVWEILERKLEVLGSVITSNTLSLK 903
>gi|224008246|ref|XP_002293082.1| Hypothetical protein THAPSDRAFT_263934 [Thalassiosira pseudonana
CCMP1335]
gi|220971208|gb|EED89543.1| Hypothetical protein THAPSDRAFT_263934 [Thalassiosira pseudonana
CCMP1335]
Length = 434
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 190/466 (40%), Positives = 267/466 (57%), Gaps = 60/466 (12%)
Query: 172 SKLLPFQRDGVRFALQHG-GRILLADEMGLGKTIQAIAVATCFRDV-WPVLILTPSSLRL 229
SKL PFQR V FALQ+G GRILL DEMGLGKT+ ++A+ ++ +P+LIL P+SLR
Sbjct: 3 SKLRPFQRKAVDFALQNGTGRILLGDEMGLGKTLTSLAIMLSYQQTEFPLLILCPASLRY 62
Query: 230 HWAAMIQQ---WLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVV 286
W A I++ W IP + I V G + GF G I++Y ++
Sbjct: 63 TWPAEIEKVCPW--IPSTAIYCV----KGKDDVGFA-------------GEI-IVTYSLL 102
Query: 287 ---LKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
++ NIL NF+ +IADESH LK ++R LP+++ ++ LLLSGTPAL+RP+
Sbjct: 103 QERFQIANILKECNFQCIIADESHNLKQLSSQRCQLALPLLQNSKRLLLLSGTPALNRPV 162
Query: 344 ELFKQLEALYPD------VYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVM 394
EL+ Q+ AL P ++Y RYC K FG G+SN +ELH +K TVM
Sbjct: 163 ELWPQVHALDPKGKMFGKYGMRYNDYTKRYCNAKRTRFGWDVNGSSNADELHACLK-TVM 221
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKF 454
IRRLK +VL LP K+R V + ++ RQ + E++ G S++ S F
Sbjct: 222 IRRLKSEVLHDLPSKQRAIVPVTISA---RQAVS-----EIMDGV-----SDDMANSAHF 268
Query: 455 TEKNLINKIYTDSAEAKIPAVLDYLETVIE---AGCKFLIFAHHQPMLDAIHQLF---LK 508
+ L+N+ Y AK PA +Y+ ++ + K ++FAHH+ +LD I K
Sbjct: 269 EARRLLNQAYQAIGIAKAPASTEYIVDWLDGSDSSQKLVVFAHHKEVLDYIETTISAKYK 328
Query: 509 KKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWT 568
++ IRIDG PPA R V +FQ D ++ A+LSM A GVGLTLTAAS++IF EL W
Sbjct: 329 GRMGMIRIDGSVPPADRALRVRKFQTNDSIRLAILSMTAAGVGLTLTAASSIIFTELHWV 388
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLAND---TVDDIVWDVVRSKL 611
PG L QAEDR HRIGQV++VN+ Y + D +VD +W ++ K+
Sbjct: 389 PGVLAQAEDRCHRIGQVNAVNIMYAICKDEDVSVDRSLWAMLGRKV 434
>gi|302799561|ref|XP_002981539.1| hypothetical protein SELMODRAFT_233770 [Selaginella moellendorffii]
gi|300150705|gb|EFJ17354.1| hypothetical protein SELMODRAFT_233770 [Selaginella moellendorffii]
Length = 981
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/499 (34%), Positives = 278/499 (55%), Gaps = 56/499 (11%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
+P ++ LLPFQ DG+R+ L+ GGR+L+ADEMGLGKT+QAIA+A C+ + P+L++ P+
Sbjct: 125 LPWKLKQYLLPFQWDGIRYGLRRGGRVLIADEMGLGKTLQAIAIAACYLNDGPLLVVCPA 184
Query: 226 SLRLHWAAMIQQWLN-IPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
SLRL WA +++WL + PS++ +V + + +++ + +ISY+
Sbjct: 185 SLRLVWAEELERWLPFLSPSDVHLVFGR-------------EDDLKDLKTPKVV-VISYN 230
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQ----AKRTAATLPIIKKAQYALLLSGTPALS 340
++ +L+ ++ +++ VI DESH ++ ++ ++ T A + + + A A+ LSGTP+LS
Sbjct: 231 MLRRLRESILRCSWETVIVDESHNIRCSKRPTDSEETTALMEVARAAPRAVFLSGTPSLS 290
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKK 400
RP ++F Q+ AL + + + Y F YQ EEL+ L++ VMIRRLK
Sbjct: 291 RPFDIFNQVNALCIILRETTAAQSHHY-----FQDYQRGVRLEELNILLREIVMIRRLKD 345
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLI 460
+L QLP KRRQ + L ++ DM + K I A E ++ + +
Sbjct: 346 QILTQLPPKRRQIIRLRLSSGDMLE----------AKASIDADGDERQLNTQEI------ 389
Query: 461 NKIYTDSAEAKIPAVLDYLET-----VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
AK+ V D+L V E K +IF HH +++++ + + K++ IR
Sbjct: 390 -------GIAKLKGVTDWLSNNPFSAVKEEMQKLIIFCHHHKVMNSLQEFIVSKEIEFIR 442
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
IDG T RQ F++KD+VK A++ + AGGVGL L+AA V+F EL T +L+QA
Sbjct: 443 IDGHTDAKDRQKATEIFRQKDEVKVAIVGVTAGGVGLDLSAARNVVFVELPKTASELVQA 502
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS---LEVSSSQI 632
EDRAHR GQ S+VN+Y A +T D+ W + LE + + +G E++ LEV +
Sbjct: 503 EDRAHRRGQKSAVNIYIFCAKETSDECHWQSLSKSLERVTTMTNGSEDAIPGLEVETLMD 562
Query: 633 RSSPAKQKTLDSFLKRCNN 651
++ K S L+RC N
Sbjct: 563 QTESGDTKAC-SLLRRCQN 580
>gi|340058702|emb|CCC53062.1| putative DNA helicase [Trypanosoma vivax Y486]
Length = 948
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 189/554 (34%), Positives = 281/554 (50%), Gaps = 62/554 (11%)
Query: 108 WNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPL-------VQRAIASASAAPDLR 160
W R + +P+ S L +++ V +E + V+ +A L
Sbjct: 103 WYVPRRAYIYPMDSYDSLISALKKLTAPRVLLEEIPQFFFRCLREVREVMAQHEQNVSLS 162
Query: 161 EKYDQIPAHI-ESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPV 219
D P + ++L PFQ+ GV F + GGR ++AD+MGLGKT+Q IA A +R+ WP
Sbjct: 163 SSQDADPEDVVYTQLRPFQKRGVDFIVARGGRGMIADDMGLGKTVQGIAFAHHYRNEWPA 222
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVV-LSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
LI+ P SL +WA + ++ IP I + ++L S +++V
Sbjct: 223 LIVCPLSLMENWAKELTRFCGIPAGRIATIHTTKL--STLDVYSVV-------------- 266
Query: 279 NIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPA 338
I++Y + L I FK+VI DESH++K+ AKRT + L + + A+ LLLSGTP
Sbjct: 267 -IVAYSSLKCLDGI--KETFKVVILDESHYIKSVDAKRTVSALKLCRSAKRVLLLSGTPT 323
Query: 339 LSRPIELFKQLEALYPDVYKNVH-EYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVM 394
LSRPIEL+ QL+ + + ++G RYC G FGI + G SN ELH L++ V
Sbjct: 324 LSRPIELYPQLQTIMRSSWSPTKTQFGARYCNAFVGRFGIDFSGHSNMSELHVLLQQFV- 382
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKF 454
IRR KKD+ +LP K RQ ++L + K+ + + L+ G A S +L
Sbjct: 383 IRRTKKDMAGELPSKSRQMLYLYITPKERKAMEKDVLALKESFGSELADSSSPAPFALTT 442
Query: 455 T-------------------EKNLIN--KIYTDSAEAKIPAVLDYL----ETVIEAGCKF 489
T +N ++ +A AKIPAV DY+ E ++E G K
Sbjct: 443 TADWSSPVAGSLGGSPSGSGLSKPMNAFELRIATARAKIPAVQDYMRSMAEQMVETGEKV 502
Query: 490 LIFAHHQPMLDAIHQLF----LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSM 545
+ FAHHQ M+DA+ + KK + I + G TP A R L++ F+ A+LSM
Sbjct: 503 IFFAHHQIMMDALRETVETANPKKPLDYIYVTGDTPAAQRDTLISHFRSTPTCHVAILSM 562
Query: 546 KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWD 605
+ GVG +T A+ V+FAEL W P +Q EDR HRIGQ S + YLLA T D ++W
Sbjct: 563 HSCGVGHNMTCATMVVFAELDWNPSTHLQCEDRVHRIGQSSPCVIKYLLAEGTSDSVIWP 622
Query: 606 VVRSKLENLGQVLD 619
++R+KL V++
Sbjct: 623 LLRTKLTVTQAVME 636
>gi|407425421|gb|EKF39414.1| DNA helicase, putative [Trypanosoma cruzi marinkellei]
Length = 819
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/485 (37%), Positives = 266/485 (54%), Gaps = 58/485 (11%)
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+ S+L PFQ+ GV F + GGR ++AD+MGLGKT+QA+AVA +R+ WPVLI+ P SL
Sbjct: 71 VYSQLRPFQKKGVDFIIARGGRGMIADDMGLGKTVQALAVAHHYRNEWPVLIVCPLSLVE 130
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKL 289
+W + ++ +IP I ++ N+K + I+ Y + L
Sbjct: 131 NWTKELMRFCSIPIGRIAIL----------------QNSKVRVTDVHSAVIVPYSSLKSL 174
Query: 290 QNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQL 349
S+ F++VI DESH++K +KRT A L + + A+ LLLSGTP LSRPIEL+ QL
Sbjct: 175 DT--QSTTFQVVILDESHYIKTVDSKRTVAALKLCRVARRVLLLSGTPTLSRPIELYPQL 232
Query: 350 EA-LYPDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
+ ++P + + RYC G FG+ Y G S+ ELH L++ V IRR K+++ +
Sbjct: 233 QTIMHPSWTPSKSLFAARYCNAFVGRFGVDYLGHSHMSELHVLLQQFV-IRRTKRELGNE 291
Query: 406 LPVKRRQQVFLDVAEKDMR----QIYAL---FRE----------------LEVVKGKIKA 442
LP K RQ +++ + K+ + + AL FR+ + G +
Sbjct: 292 LPSKIRQLLYVYITPKEKKALEKSVLALRNSFRDGATLPTLGAVASTTNMTQCAGGNLTT 351
Query: 443 CKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYL----ETVIEAGCKFLIFAHHQPM 498
C + + T +L KI T A AKI AV DY+ E ++E+G K +IFAHHQ M
Sbjct: 352 CTAGGATATRNMTAFDL--KIAT--ARAKIAAVQDYVKSTTEQMVESGQKVIIFAHHQCM 407
Query: 499 LDAIHQLF----LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
++AI + K+ + I I G TP A R+AL T F+ + AVLSM + GVG L
Sbjct: 408 MEAIREAVESVQPKQPLDYIYITGETPAAQREALTTHFRTSTNCHVAVLSMHSCGVGHNL 467
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
T A+ V+FAEL W P +Q EDR HR+GQ S+ + YLLA T D ++W ++++KL
Sbjct: 468 TCATMVVFAELDWNPSTHLQCEDRVHRMGQSSACVIKYLLAEGTSDSVIWPMLQTKLNVT 527
Query: 615 GQVLD 619
VL+
Sbjct: 528 HAVLE 532
>gi|224001070|ref|XP_002290207.1| Hypothetical protein THAPSDRAFT_262487 [Thalassiosira pseudonana
CCMP1335]
gi|220973629|gb|EED91959.1| Hypothetical protein THAPSDRAFT_262487, partial [Thalassiosira
pseudonana CCMP1335]
Length = 466
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 175/465 (37%), Positives = 246/465 (52%), Gaps = 36/465 (7%)
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+ L P+QR GV F L GR LLADEMGLGKT+QAIA + +R WP+L+L PS+ R
Sbjct: 20 VAKALAPYQRGGVEFILDKEGRALLADEMGLGKTVQAIAAMSAYRHEWPLLVLCPSTARY 79
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--SYDVVL 287
HW + WL S GS+ +++S + DG ++ S +++
Sbjct: 80 HWEIEFRHWLGKT--------SLAKGSD--DINVLTSGKDYILRYDGTTKVVICSLGLIV 129
Query: 288 KLQN--ILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIEL 345
L N + FK VI DESH LKN +KRT + +P++K A LLLSGTPAL+RP EL
Sbjct: 130 ALVNNERIYPGMFKCVIVDESHALKNKSSKRTQSVVPLLKAADRCLLLSGTPALARPSEL 189
Query: 346 FKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE-------ELHNLMKATVMIRRL 398
+ QL L D Y G + S++ ELH L+ +TVMIRR+
Sbjct: 190 WPQLSVLSDDFYAKYTRGEKGEPDSGTRARWVSCSSYADASFWLAELHTLLTSTVMIRRM 249
Query: 399 KKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKN 458
K D+L LP K R++ F+ V + L RE V + E Q + K
Sbjct: 250 KADILKNLPSKIREKAFISVMGR-------LAREHTVADSSLGLGPQYNE-QGEEIKSKE 301
Query: 459 LINKIYTDSAEAKIPAVLDYLETVIE--AGCKFLIFAHHQPMLDAIHQL-----FLKKKV 511
+++ +Y + +KI V L++ + K IFAHH +L+AI + F+
Sbjct: 302 VLHHLYNITGRSKIDKVTKMLKSWLADPTKGKLCIFAHHLDVLNAITRGAGLSNFVGSNT 361
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
IRIDG T P +RQ + FQ V+ A+L + A GV +TLTA+STV FAEL WTP
Sbjct: 362 RFIRIDGATNPKTRQEQILTFQTDPTVRIAMLGITAAGVAVTLTASSTVWFAELFWTPAI 421
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
+IQAEDR HRIGQ + V Y +A T+D+++W ++ K +LG+
Sbjct: 422 MIQAEDRCHRIGQQARVRCLYFVAKSTLDEVLWKLIEKKFRDLGE 466
>gi|118372610|ref|XP_001019500.1| SNF2 family N-terminal domain containing protein [Tetrahymena
thermophila]
gi|89301267|gb|EAR99255.1| SNF2 family N-terminal domain containing protein [Tetrahymena
thermophila SB210]
Length = 731
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 274/513 (53%), Gaps = 47/513 (9%)
Query: 158 DLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW 217
D++ + +P I +L +Q++G+RF + + RIL+ADEMG+GKTIQAI +A +
Sbjct: 102 DIKTPENDLPQSILKQLFNYQKEGIRFGMMNKCRILIADEMGVGKTIQAICLAFAYLKNL 161
Query: 218 P--VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
++++ PSSL+ +W I +W + L G S F V + I
Sbjct: 162 SKKMIVICPSSLKFYWKQEINKWYRVI----------LNGRQVSQFIQVFQASNDQIEQQ 211
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
I SYD++ N + N + IADE+H+LKN KR+ A +P +K+ ++ +LL+G
Sbjct: 212 TKILICSYDIIQSAINKIEKYNAFLGIADEAHYLKNPDTKRSKAIIPYLKQLKHVILLTG 271
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVF--GI-YQGASNHEELHNLMK 390
TPA ++P E++ + L PDV+ N +YG RYC K F G+ Y G+SN ELH L+
Sbjct: 272 TPAFAKPQEMYSLVSILRPDVFTNFLDYGKRYCNPKKSNFHNGLDYSGSSNELELHYLLT 331
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKI---------- 440
+MIRRLKKDVL +LP K+R+++ + QI + ++++ +I
Sbjct: 332 RYMMIRRLKKDVLNELPDKKRKKIKVSTDSSIQSQIAQILKKVKDKTLQILMNPPPNQQF 391
Query: 441 --------KACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIF 492
+ QSLK Y S AK VL+YLE ++++ K ++F
Sbjct: 392 QNEPDSYFNGNHGSSQFQSLK--------TCYMLSGLAKQQQVLNYLEELLKSVDKVIVF 443
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGL 552
A H +LD I + +K IRIDG + V F+ ++ A+LS A +G+
Sbjct: 444 AEHIQILDNIEKFANDRKKKYIRIDGSVRDEEKSIRVQSFENNKNISIAILSFGAASLGI 503
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
TLT+AS ++FAE+ WTP + QAEDRAHRIGQ + V +YL+ T+D++++ + K +
Sbjct: 504 TLTSASNILFAEMHWTPAIMEQAEDRAHRIGQKNPVTCHYLIGEGTLDNMLYKKILEKQQ 563
Query: 613 NLGQVLDGHENSLEVSSS----QIRSSPAKQKT 641
+G +LDG +L+ + Q+ S+ Q++
Sbjct: 564 IVGAILDGKTVNLKFDETDTPNQMNSNTINQQS 596
>gi|407860316|gb|EKG07335.1| DNA helicase, putative [Trypanosoma cruzi]
Length = 942
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 188/526 (35%), Positives = 281/526 (53%), Gaps = 72/526 (13%)
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+ S+L PFQ+ GV F + GGR ++AD+MGLGKT+QA+AVA +R+ WPVLI+ P SL
Sbjct: 194 VYSQLRPFQKKGVDFIIARGGRGMIADDMGLGKTVQALAVAHHYRNEWPVLIVCPLSLVE 253
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKL 289
+W + ++ +IP I + N+K + I+ Y + L
Sbjct: 254 NWTKELMRFCSIPIGRIAIF----------------QNSKVRVTDVHSAVIVPYSSLKSL 297
Query: 290 QNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQL 349
S+ F++VI DESH++K +KRT A L + + A+ LLLSGTP LSRPIEL+ QL
Sbjct: 298 DT--QSTTFQVVILDESHYIKTVDSKRTVAALKLCRVARRVLLLSGTPTLSRPIELYPQL 355
Query: 350 EA-LYPDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
+ ++P + + RYC G FG+ Y G S+ ELH L++ V IRR K+++ +
Sbjct: 356 QTIMHPSWTPSKSLFAARYCNAFVGRFGVDYLGHSHMSELHVLLQQFV-IRRTKRELGNE 414
Query: 406 LPVKRRQQVFLDVAEKDMR----QIYAL---FRE----------------LEVVKGKIKA 442
LP K RQ +++ + K+ + + AL F++ + G +
Sbjct: 415 LPSKIRQLLYVYITPKEKKALEKSVLALRNSFKDGATLPTLGTAVSTTNMTQGTGGNLTT 474
Query: 443 CKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYL----ETVIEAGCKFLIFAHHQPM 498
C + T +L KI T A AKI AV DY+ E ++E+G K +IFAHHQ M
Sbjct: 475 CTPGGATATRNMTAFDL--KIAT--ARAKIAAVQDYVKSTTEQMVESGQKVIIFAHHQCM 530
Query: 499 LDAIHQLF----LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
++AI + K+ + I I G TP A R+AL T F+ + AVLSM + GVG L
Sbjct: 531 MEAIREAVESVQPKQPLDYIYITGETPAAQREALTTHFRTSTNCHVAVLSMHSCGVGHNL 590
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
T A+ V+FAEL W P +Q EDR HR+GQ S+ + YLLA T D ++W ++++KL
Sbjct: 591 TCATMVVFAELDWNPSTHLQCEDRVHRMGQSSACVIKYLLAEGTSDSVIWPMLQTKLNVT 650
Query: 615 GQVLDGHE----------NSLEVSSSQIRSSPA----KQKTLDSFL 646
VL+ + ++ + S + +P+ KQ TL+SFL
Sbjct: 651 HAVLEDSQAGGEGWSAGADTRRILRSDVPLTPSSPEKKQVTLESFL 696
>gi|71653795|ref|XP_815529.1| DNA helicase [Trypanosoma cruzi strain CL Brener]
gi|70880590|gb|EAN93678.1| DNA helicase, putative [Trypanosoma cruzi]
Length = 938
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 188/526 (35%), Positives = 280/526 (53%), Gaps = 72/526 (13%)
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+ S+L PFQ+ GV F + GGR ++AD+MGLGKT+QA+AVA +R+ WPVLI+ P SL
Sbjct: 190 VYSQLRPFQKKGVDFIIARGGRGMIADDMGLGKTVQALAVAHHYRNEWPVLIVCPLSLVE 249
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKL 289
+W + ++ +IP I + N+K + I+ Y + L
Sbjct: 250 NWTKELMRFCSIPIGRIAIF----------------QNSKVRVTDVHSAVIVPYSSLKSL 293
Query: 290 QNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQL 349
S+ F++VI DESH++K +KRT A L + + A+ LLLSGTP LSRPIEL+ QL
Sbjct: 294 DT--QSTTFQVVILDESHYIKTVDSKRTVAALKLCRVARRVLLLSGTPTLSRPIELYPQL 351
Query: 350 EA-LYPDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
+ ++P + + RYC G FG+ Y G S+ ELH L++ V IRR K+++ +
Sbjct: 352 QTIMHPSWTPSKSLFAARYCNAFVGRFGVDYLGHSHMSELHVLLQQFV-IRRTKRELGNE 410
Query: 406 LPVKRRQQVFLDVAEKDMR----QIYAL---FRE----------------LEVVKGKIKA 442
LP K RQ +++ + K+ + + AL FR+ + G +
Sbjct: 411 LPSKIRQLLYVYITPKEKKALEKSVLALRNSFRDGATLPTLGAAVGTTNMTQGTGGNLTK 470
Query: 443 CKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYL----ETVIEAGCKFLIFAHHQPM 498
C + T +L KI T A AKI AV DY+ E ++E+G K +IFAHHQ M
Sbjct: 471 CTPGGATATRNMTAFDL--KIAT--ARAKIAAVQDYVKSTTEQMVESGQKVIIFAHHQCM 526
Query: 499 LDAIHQLF----LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
++AI + K+ + I I G TP A R+AL T F+ + AVLSM + GVG L
Sbjct: 527 MEAIREAVESVQPKQPLDYIYITGETPAAQREALTTHFRTSTNCHVAVLSMHSCGVGHNL 586
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
T A+ V+FAEL W P +Q EDR HR+GQ S+ + YLLA T D ++W ++++KL
Sbjct: 587 TCATMVVFAELDWNPSTHLQCEDRVHRMGQSSACVIKYLLAEGTSDSVIWPMLQTKLNVT 646
Query: 615 GQVLDGHE----------NSLEVSSSQIRSSPA----KQKTLDSFL 646
VL+ + ++ + S + +P+ KQ TL+ FL
Sbjct: 647 HAVLEDSQAGGEGWSAGADTRRILRSDVPLTPSSPEKKQVTLEGFL 692
>gi|342185649|emb|CCC95134.1| putative SNF2 DNA repair protein [Trypanosoma congolense IL3000]
Length = 936
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 198/610 (32%), Positives = 299/610 (49%), Gaps = 92/610 (15%)
Query: 108 WNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIP 167
W + + +P+ F +L I V +E + P R S + QI
Sbjct: 105 WYVPKSAYIYPIEFYEEMIGLLKRIPRTKVLLEEVPPFFFRCWTSGKQ--RISTHMQQIK 162
Query: 168 AHIE----------SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW 217
+ S+L FQ+ GV F +Q GGR ++AD+MGLGKT+QAIAVA +R+ W
Sbjct: 163 CGVSQDTDPHDVVYSQLHDFQKKGVDFIIQRGGRGMIADDMGLGKTVQAIAVAHHYRNEW 222
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
P+LI+ P SL +W+ + ++ IPPS + + +Q F + ++
Sbjct: 223 PLLIVCPLSLVENWSRELTRFCLIPPSRMALAHTQ-------KFVMRDCHS--------- 266
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
I+ Y + L ++ F +VI DESHF+K+ A+RT ATL + K A+ LLLSGTP
Sbjct: 267 IAIVPYTSLRVLSDV--PKTFNVVILDESHFIKSTTAQRTIATLKVCKNAKRVLLLSGTP 324
Query: 338 ALSRPIELFKQLEALY-PDVYKNVHEYGNRYCKG--GVFGIYQ-GASNHEELHNLMKATV 393
A+SRPIELF QL+A+ P ++ RYC G FG+ G SN ELH L++
Sbjct: 325 AISRPIELFSQLQAIVEPSYMPTKTQFSARYCNAFVGRFGLDDTGHSNMSELHALLQQ-Y 383
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELE-------VVKG------KI 440
MIRR K ++ LP+K RQ +L + K+ + + L V+ G ++
Sbjct: 384 MIRRTKSELGRDLPLKNRQLFYLYIEPKERKALEGCVNTLRQSIKDGLVLPGLTGPSAQV 443
Query: 441 KAC--KSEEEVQSLKFTEKNLINK--------------IYTDSAEAKIPAVLDYLET--- 481
C +S V+ + NK + +++AK+ AV +++ T
Sbjct: 444 SGCGTQSPSAVEPAAAAANDSTNKCSLPISGRSLTLLEMRHATSKAKLTAVQEFVRTTCE 503
Query: 482 -VIEAGCKFLIFAHHQPMLD----AIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD 536
++E+ K + FAHH M+D AI + + + +RI G TP R+ L+ F+ D
Sbjct: 504 QIVESSEKVIFFAHHLVMIDGIAKAIESVKSRGPLDYVRIVGDTPAVQREKLLNHFRTAD 563
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN 596
A+LSM+ GVG LT A+ V+FAEL W P +Q EDR HRIGQ S + YLLA
Sbjct: 564 KCHIALLSMQTCGVGHNLTCATMVVFAELDWNPSTHLQCEDRVHRIGQSSPCFIKYLLAE 623
Query: 597 DTVDDIVWDVVRSKLENLGQVLD------------------GHENSLEVSSSQIRSS--P 636
T D ++W ++++KL V++ G EN +V+ SS P
Sbjct: 624 GTSDSVIWPLLQNKLTVTQAVMEDRNAVGNEDIGAASVCGWGSENRRKVNPDGTISSSQP 683
Query: 637 AKQKTLDSFL 646
KQ TL+SF+
Sbjct: 684 KKQVTLESFV 693
>gi|42567734|ref|NP_196398.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
gi|332003824|gb|AED91207.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
Length = 1190
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 178/508 (35%), Positives = 268/508 (52%), Gaps = 64/508 (12%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
+ +P + + LLPFQ DG+RF L+ GGR +ADEMGLGKT+QAIA+A CF +L++
Sbjct: 194 ETLPRKLVNALLPFQLDGLRFGLRRGGRCFIADEMGLGKTLQAIAIAGCFISEGSILVVC 253
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+ LR WA +++WL + PS++ +V G + + +P +IS
Sbjct: 254 PAVLRFTWAEELERWLPSCLPSDVHLV---FGHQDNPAY----------LPRWPKVVVIS 300
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAK----RTAATLPIIKKAQYALLLSGTPA 338
Y ++ L+ ++ + ++I DESH L+ ++ K L + +K ++ +LLSGTP+
Sbjct: 301 YKMLQHLRTTMLEREWALLIVDESHHLRCSKKKSDPPEIKTVLDVAEKVKHIILLSGTPS 360
Query: 339 LSRPIELFKQLEALYPDVY-KNVHEYGNRYC--------KGGVFGIYQGASNHEELHNLM 389
+SRP ++F Q+ L+P + K+ +E+ YC +G +F + + EL+ L+
Sbjct: 361 VSRPFDIFHQINMLWPGLLGKDKYEFAKTYCEVGLVRGIQGKIFQDFSKGTRLLELNILL 420
Query: 390 KATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVK-GKIKAC--KSE 446
TVMIRRLK+ +L QLP KRRQ V + + + D+ A+ E + K G I KS
Sbjct: 421 NQTVMIRRLKQHLLTQLPPKRRQIVTILLKKSDIALAMAIVSEAKKQKDGAIAEVTEKSH 480
Query: 447 EEVQSLKFT------------------EKNLINKI-YTDSAEAKIPAV------------ 475
E Q+ + + E L K+ Y AK+ A
Sbjct: 481 EPDQNARGSNEAGHVNAENSDGPNSDKENQLCGKLSYQQLGIAKLSAFREWLSLHPLLSG 540
Query: 476 LDYLETVIE---AGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
LDY I+ + K ++FAHH +LD I + K + +RIDG T P RQ V F
Sbjct: 541 LDYTPEEIDGDRSSTKMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSF 600
Query: 533 QEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYY 592
Q +VK A++ ++AGGVGL +AA V+F EL TP L+QAEDRAHR GQ S+VNVY
Sbjct: 601 QFSSEVKIAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYI 660
Query: 593 LLANDTVDDIVWDVVRSKLENLGQVLDG 620
A DT+D+ W + KL + DG
Sbjct: 661 FCAKDTMDESNWQNLNKKLHRISSTTDG 688
>gi|71648872|ref|XP_813216.1| DNA helicase [Trypanosoma cruzi strain CL Brener]
gi|70878080|gb|EAN91365.1| DNA helicase, putative [Trypanosoma cruzi]
Length = 744
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 185/520 (35%), Positives = 275/520 (52%), Gaps = 72/520 (13%)
Query: 176 PFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMI 235
PFQ+ GV F + GGR ++AD+MGLGKT+QA+AVA +R+ WPVLI+ P SL +W +
Sbjct: 2 PFQKKGVDFIIARGGRGMIADDMGLGKTVQALAVAHHYRNEWPVLIVCPLSLVENWTKEL 61
Query: 236 QQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMS 295
++ +IP I + N+K + I+ Y + L S
Sbjct: 62 MRFCSIPIGRIAIF----------------QNSKVRVTDVHSAVIVPYSSLKSLDT--QS 103
Query: 296 SNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEA-LYP 354
+ F++VI DESH++K +KRT A L + + A+ LLLSGTP LSRPIEL+ QL+ ++P
Sbjct: 104 TTFQVVILDESHYIKTVDSKRTVAALKLCRVARRVLLLSGTPTLSRPIELYPQLQTIMHP 163
Query: 355 DVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRR 411
+ + RYC G FG+ Y G S+ ELH L++ V IRR K+++ +LP K R
Sbjct: 164 SWTPSKSLFAARYCNAFVGRFGVDYLGHSHMSELHVLLQQFV-IRRTKRELGNELPSKIR 222
Query: 412 QQVFLDVA-------EKDMRQIYALFRE----------------LEVVKGKIKACKSEEE 448
Q +++ + EK + + FR+ + G + C +
Sbjct: 223 QLLYVYITPKEKKALEKSVSALRNSFRDGATLPTLGDVASTTNMAQGTGGNLTTCTAGGV 282
Query: 449 VQSLKFTEKNLINKIYTDSAEAKIPAVLDYL----ETVIEAGCKFLIFAHHQPMLDAIHQ 504
+ T +L KI T A AKI AV DY+ E ++E+G K +IFAHHQ M++AI +
Sbjct: 283 TATRNMTAFDL--KIAT--ARAKIAAVQDYVKSTTEQMVESGQKVIIFAHHQCMMEAIRE 338
Query: 505 LF----LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTV 560
K+ + I I G TP A R+AL T F+ + AVLSM + GVG LT A+ V
Sbjct: 339 AVESVQPKQPLDYIYITGETPAAQREALTTHFRTSTNCHVAVLSMHSCGVGHNLTCATMV 398
Query: 561 IFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
+FAEL W P +Q EDR HR+GQ S+ + YLLA T D ++W ++++KL VL+
Sbjct: 399 VFAELDWNPSTHLQCEDRVHRMGQSSACVIKYLLAEGTSDSVIWPMLQTKLNVTHAVLED 458
Query: 621 HE----------NSLEVSSSQIRSSPA----KQKTLDSFL 646
+ ++ + S + +P+ KQ TL+ FL
Sbjct: 459 SQAGGEGWSAGADTRRILRSDVPLTPSSPEKKQLTLEGFL 498
>gi|410968590|ref|XP_003990785.1| PREDICTED: DNA annealing helicase and endonuclease ZRANB3 [Felis
catus]
Length = 1088
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 162/438 (36%), Positives = 247/438 (56%), Gaps = 32/438 (7%)
Query: 198 MGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGS 256
MGLGKTIQAIA+A +++ WP+LI+ PSSLR W +++W+ + P +I V+
Sbjct: 1 MGLGKTIQAIAIAYFYKEEWPLLIVVPSSLRYPWTEEMEKWIPELSPEDINVI------Q 54
Query: 257 NRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKR 316
N++ +S+ +K I GL + ++ L N NFK+VI DESH++K+ A R
Sbjct: 55 NKTDIGRIST-SKVTILGYGLLTTDAETLICALNN----QNFKVVIVDESHYMKSRNATR 109
Query: 317 TAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIY 376
+ LPI++ A+ A+LL+GTPAL RP ELF Q+EAL+P + EY RYC +
Sbjct: 110 SKILLPIVQTAKRAILLTGTPALGRPEELFMQIEALFPQKFGTWTEYAKRYCNA-----H 164
Query: 377 QGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAE------KDMRQIYALF 430
+ HE + + + + + + V + V L A+ +++ F
Sbjct: 165 MRSHIHEYVAKGDVSEITVYVSSRSSCDRWTVGQGNYVMLIRAKLMYGLGNPCKELNTSF 224
Query: 431 RELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKF 489
E E + + +E T LI +++ +A AK AV DY++ +++ KF
Sbjct: 225 EEWEKLMRAPNSGATE--------TVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKF 276
Query: 490 LIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGG 549
L+FAHH ML A + ++ K IRIDG P + R LV +FQ+ D + A+LS++A G
Sbjct: 277 LVFAHHLSMLQACTEAVIENKTRYIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAG 336
Query: 550 VGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRS 609
GLT TAA+ V+FAEL W PG + QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++
Sbjct: 337 QGLTFTAATHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLVANGTLDTLMWGMLNR 396
Query: 610 KLENLGQVLDGHENSLEV 627
K + G L+G + L+
Sbjct: 397 KTQVTGSTLNGRKEQLQA 414
>gi|342185651|emb|CCC95136.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 936
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 195/610 (31%), Positives = 299/610 (49%), Gaps = 92/610 (15%)
Query: 108 WNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIP 167
W + + +P+ F +L I V +E + P R S + QI
Sbjct: 105 WYVPKSAYIYPIEFYEEMIGLLKRIPRTKVLLEEVPPFFFRCWTSGKQ--RISTHMQQIR 162
Query: 168 AHIE----------SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW 217
+ S+L FQ+ GV F ++ GGR ++AD+MGLGKT+QAIAVA +R+ W
Sbjct: 163 CGVSQDADPHDVVYSQLHDFQKKGVDFIIRRGGRGMIADDMGLGKTVQAIAVAHHYRNEW 222
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
P+LI+ P SL +W+ + ++ IPPS + + +Q F + ++
Sbjct: 223 PLLIVCPLSLVENWSRELTRFCLIPPSRMALAHTQ-------KFVMRDCHS--------- 266
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
I+ Y + L ++ F +VI DESHF+K+ A+RT ATL + K A+ LLLSGTP
Sbjct: 267 IAIVPYTALRVLSDV--PKTFNVVILDESHFIKSTTAQRTIATLKVCKNAKRVLLLSGTP 324
Query: 338 ALSRPIELFKQLEALY-PDVYKNVHEYGNRYCKG--GVFGIYQ-GASNHEELHNLMKATV 393
A+SRPIELF QL+A+ P ++ RYC G FG+ G SN ELH L++
Sbjct: 325 AISRPIELFSQLQAIVEPSYMPTKTQFSARYCNAFVGRFGLDDTGHSNMSELHALLQQ-Y 383
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELE-------VVKG------KI 440
MIRR K ++ LP+K RQ +L + K+ + + L V+ G ++
Sbjct: 384 MIRRTKSELGRDLPLKNRQLFYLYIEPKERKALEGCVNTLRQSIKDGLVLPGLTGPSAQV 443
Query: 441 KAC--KSEEEVQSLKFTEKNLINK--------------IYTDSAEAKIPAVLDYLET--- 481
C +S V+ + NK + +++AK+ AV +++ T
Sbjct: 444 SGCGTQSPSAVEPAAAAANDSTNKCSLPISGRSLTLLEMRHATSKAKLTAVQEFVRTTCE 503
Query: 482 -VIEAGCKFLIFAHHQPMLD----AIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD 536
++E+ K + FAHH M+D AI + + + +RI G TP R+ L+ F+ D
Sbjct: 504 QIVESSEKVIFFAHHLVMIDGIAKAIESVKSRGPLDYVRIVGDTPAVQREKLLNHFRTAD 563
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN 596
A+LSM+ GVG LT A+ V+FAEL W P +Q EDR HRIGQ S + YLLA
Sbjct: 564 KCHIALLSMQTCGVGHNLTCATMVVFAELDWNPSTHLQCEDRVHRIGQSSPCFIKYLLAE 623
Query: 597 DTVDDIVWDVVRSKLENLGQVLD------------------GHENSLEVSSSQIRSS--P 636
T D ++W ++++KL V++ G E+ +V+ SS P
Sbjct: 624 GTSDSVIWPLLQNKLTVTQAVMEDRSAVGNEDIGAASVCGWGSESRRKVNPDGTISSSQP 683
Query: 637 AKQKTLDSFL 646
+Q TL+SF+
Sbjct: 684 KRQVTLESFV 693
>gi|380804765|gb|AFE74258.1| zinc finger Ran-binding domain-containing protein 3, partial
[Macaca mulatta]
Length = 424
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/346 (42%), Positives = 214/346 (61%), Gaps = 17/346 (4%)
Query: 289 LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQ 348
L + L + NFK+VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL RP ELF Q
Sbjct: 1 LIDALNNQNFKVVIVDESHYMKSRNATRSRILLPVVQKARRAILLTGTPALGRPEELFMQ 60
Query: 349 LEALYPDVYKNVHEYGNRYCKGGV--FGIY-----QGASNHEELHNLMKATVMIRRLKKD 401
+EAL+P + +Y RYC + FG +GASN ELH L+ + +MIRRLK +
Sbjct: 61 IEALFPQKFGRWTDYAKRYCNARIRYFGKRPQWDCRGASNLNELHQLL-SDIMIRRLKTE 119
Query: 402 VLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLIN 461
VL QLP K RQ++ D+ +++ F E E + + E T LI
Sbjct: 120 VLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAME--------TVMGLIT 171
Query: 462 KIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
+++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K IRIDGG
Sbjct: 172 RMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGGV 231
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
+ R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG + QAEDRAH
Sbjct: 232 SSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAH 291
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
RIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 292 RIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQ 337
>gi|297810883|ref|XP_002873325.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297319162|gb|EFH49584.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 1194
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 177/513 (34%), Positives = 263/513 (51%), Gaps = 69/513 (13%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
+ +P + S LLPFQ DG+RF L+ GGR +ADEMGLGKT+QAIA+A CF +L++
Sbjct: 194 ETLPRKLVSALLPFQLDGLRFGLRRGGRCFIADEMGLGKTLQAIAIAGCFISEGSILVVC 253
Query: 224 PSSLRLHWAAMIQQWLNIP-PSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+ LR WA +++WL PS+I +V G + + +P +IS
Sbjct: 254 PAVLRFSWAEELERWLPFCLPSDIHLV---FGHQDNPAY----------LPRWPKVVVIS 300
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAK----RTAATLPIIKKAQYALLLSGTPA 338
Y ++ L+ ++ + ++I DESH L+ ++ K L + +K ++ +LLSGTP+
Sbjct: 301 YKMLQHLRTTMLEREWALLIVDESHHLRCSKKKSDPPEIKTVLNVAEKVKHIVLLSGTPS 360
Query: 339 LSRPIELFKQLEALYPDVY-KNVHEYGNRYC--------KGGVFGIYQGASNHEELHNLM 389
+SRP ++F Q+ L+P + K +E+ YC +G +F + + EL+ L+
Sbjct: 361 ISRPFDIFHQINILWPGLLGKEKYEFAKTYCEVGLVRGMQGKIFQDFSKGTRLLELNILL 420
Query: 390 KATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGK--------IK 441
TVMIRRLK+ VL QLP KRRQ V + + + D+ A+ E K +
Sbjct: 421 NQTVMIRRLKQHVLTQLPPKRRQIVTILLKKSDIALATAIVSEANQKANKQNDGTIAEVT 480
Query: 442 ACKSEEEVQSLKFT------------------EKNLINKI-YTDSAEAKIPAV------- 475
E + Q+ + + E L K+ Y AK+ A
Sbjct: 481 ENSHEPKDQNAQGSNEAGHVNAENSDGPNSDRENQLCGKLSYQQLGIAKLSAFREWLSLH 540
Query: 476 -----LDYLETVIE---AGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQA 527
LDY I+ + K ++FAHH +LD I + K + +RIDG T P RQ
Sbjct: 541 PLLSGLDYTPEDIDGDTSSTKMVVFAHHHKVLDGIQEFMCDKGIGFVRIDGMTLPRDRQL 600
Query: 528 LVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSS 587
V FQ +VK A++ ++AGGVGL +AA V+F EL TP L+QAEDRAHR GQ S+
Sbjct: 601 AVQSFQFSSEVKVAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSA 660
Query: 588 VNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
VNVY A DT+D+ W + KL + DG
Sbjct: 661 VNVYIFCAKDTMDESNWQNLNKKLHRISSTTDG 693
>gi|109104419|ref|XP_001101449.1| PREDICTED: zinc finger Ran-binding domain-containing protein
3-like, partial [Macaca mulatta]
Length = 958
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 148/347 (42%), Positives = 214/347 (61%), Gaps = 17/347 (4%)
Query: 289 LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQ 348
L + L + NFK+VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL RP ELF Q
Sbjct: 22 LIDALNNQNFKVVIVDESHYMKSRNATRSRILLPVVQKARRAILLTGTPALGRPEELFMQ 81
Query: 349 LEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMIRRLKKD 401
+EAL+P + +Y RYC + FG +GASN ELH L+ + +MIRRLK +
Sbjct: 82 IEALFPQKFGRWTDYAKRYCNARIRYFGKRPQWDCRGASNLNELHQLL-SDIMIRRLKTE 140
Query: 402 VLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLIN 461
VL QLP K RQ++ D+ +++ F E E + + E T LI
Sbjct: 141 VLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAME--------TVMGLIT 192
Query: 462 KIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
+++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K IRIDGG
Sbjct: 193 RMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGGV 252
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
+ R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG + QAEDRAH
Sbjct: 253 SSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAH 312
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
RIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 313 RIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQA 359
>gi|359491297|ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
[Vitis vinifera]
Length = 1280
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 167/500 (33%), Positives = 265/500 (53%), Gaps = 60/500 (12%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
+P + LLPFQ DGVRF L+ GGR L+ADEMGLGKT+QAIA+A+CF + P+L++ P+
Sbjct: 197 LPKRLLDALLPFQLDGVRFGLRRGGRCLIADEMGLGKTLQAIAIASCFMNEGPILVVCPA 256
Query: 226 SLRLHWAAMIQQWLNIP-PSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
LR WA +++WL P++I +V N ++ +ISY
Sbjct: 257 ILRFSWAEELERWLPFCLPADIHLVFGH-------------QNNPAHLTRCPRVVVISYT 303
Query: 285 VVLKLQNILMSSNFKIVIADESHFL----KNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
++ +L+ ++ + ++I DESH L K ++ ++ A L + K + +LLSGTP+LS
Sbjct: 304 MLHRLRKSMLEREWPLLIVDESHHLQCTKKKSEPQKIKAVLDVAMKVRRIVLLSGTPSLS 363
Query: 341 RPIELFKQLEALYPDVY-KNVHEYGNRYC--------KGGVFGIYQGASNHEELHNLMKA 391
RP ++F Q+ L+P + ++ +E+ YC +G VF + EEL+ L+K
Sbjct: 364 RPYDIFHQINMLWPGLLGRDKYEFAKIYCAVNFVRGSQGKVFQDFSKGIRLEELNVLLKQ 423
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACK-SEEEVQ 450
TVMIRRLK+ VL +LP KRRQ + L + D+ + + ++ C SE V
Sbjct: 424 TVMIRRLKEHVLGELPPKRRQIIRLLLKRADI--------DFAIAATRVTKCDASENNVA 475
Query: 451 SLKFTEKNLINKIYTDSAE----------AKIPAVLDYL-------------ETVIEAGC 487
K ++ + S+ AK+ L++L ++ C
Sbjct: 476 EEKPSDNKPDDSGGAHSSSKKLSNQQLGIAKLSGFLEWLSFHPIVADSDGVASLDMKPRC 535
Query: 488 -KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMK 546
K +IFAHH +LD I + KK + +RIDG T RQ+ V F+ +VK A++ +
Sbjct: 536 LKMIIFAHHLKVLDGIQEFICKKGIGFVRIDGNTLARDRQSAVLSFRSSTEVKIAIIGIT 595
Query: 547 AGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDV 606
AGG GL ++A V+F EL +P ++QAEDRAHR GQ ++VN+Y A DT+D+ W
Sbjct: 596 AGGFGLDFSSAQNVVFLELPQSPSIMLQAEDRAHRRGQTNAVNIYIFCAKDTMDESHWQN 655
Query: 607 VRSKLENLGQVLDGHENSLE 626
+ L + +G ++++
Sbjct: 656 LNKSLRRVSYTTNGKYDAIQ 675
>gi|118396328|ref|XP_001030505.1| Helicase conserved C-terminal domain containing protein
[Tetrahymena thermophila]
gi|89284810|gb|EAR82842.1| Helicase conserved C-terminal domain containing protein
[Tetrahymena thermophila SB210]
Length = 908
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/367 (39%), Positives = 226/367 (61%), Gaps = 18/367 (4%)
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
I+SYD+ K++ + IVIADE+H+LKNAQAKRT + LPI++K ++ +LL+GTPA
Sbjct: 6 IVSYDLAPKVEEKIKRFKTNIVIADEAHYLKNAQAKRTNSLLPILQKIKHVILLTGTPAF 65
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFG---IYQGASNHEELHNLMKATVM 394
+RP E+F L + PD++K +G+RYC K FG Y G++N +EL ++K T+M
Sbjct: 66 ARPKEMFTLLSIIRPDIFKTFKSFGDRYCDPKPARFGGGIDYTGSTNEKELFYILKKTIM 125
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE---------LEVVKGKIKACKS 445
IRRLK+DVL+QLP KRR++V ++V K + +I A+ + E + + ++
Sbjct: 126 IRRLKQDVLSQLPSKRRKKVHVNVDPKILSEIQAILNQTNKSSLEQLFEQAQKQNESSNE 185
Query: 446 EEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQL 505
E+ S F+ +L Y S +AK+ + +Y++ ++E K ++FAHH ML+ +
Sbjct: 186 EQNGSSSMFSALSLC---YQLSGQAKLHELKNYIKDLLENDIKIIVFAHHNEMLNQLENF 242
Query: 506 FLKK-KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
+ ++ IRIDG P R V +FQ VK A+LS+ A GLTLTA+S ++FAE
Sbjct: 243 VQNELQLKFIRIDGKVAPKERHERVQQFQTDPQVKVAILSLLAASTGLTLTASSNIVFAE 302
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 624
++WTP + QAEDRAHRIGQ +SV +Y+L T+DD+++ + K+ + +LDG +
Sbjct: 303 MNWTPAIMQQAEDRAHRIGQENSVLCHYILGEKTLDDLLYKKIEQKIAIVSNILDGESKA 362
Query: 625 LEVSSSQ 631
L++ Q
Sbjct: 363 LKIDEVQ 369
>gi|118400670|ref|XP_001032657.1| Helicase conserved C-terminal domain containing protein
[Tetrahymena thermophila]
gi|89287000|gb|EAR84994.1| Helicase conserved C-terminal domain containing protein
[Tetrahymena thermophila SB210]
Length = 1326
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/464 (35%), Positives = 255/464 (54%), Gaps = 56/464 (12%)
Query: 199 GLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLN--IPPSEIVVVLSQLGGS 256
G+GKT+QA+ +A ++D WP+LI+ PS LR I W + I PS I VV GS
Sbjct: 18 GVGKTLQALCIAYIYKDQWPLLIICPSCLRFTIKQEIVNWFSEYIDPSLIQVVS---KGS 74
Query: 257 NR--SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQA 314
++ IV IIS+DVV L ++ F+ I DE+H+LK+ +
Sbjct: 75 DQLLKKAEIV---------------IISFDVVNNLSEVIQIKKFQTCIIDEAHYLKSLDS 119
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
+R+ +P++++ + +LL+GTPALSRP ELF L+ + PD++ + + RYC +
Sbjct: 120 QRSKTIVPLVERMKNVILLTGTPALSRPKELFNILKIIRPDIFNDFKIFAYRYCNPRLNK 179
Query: 375 I-----YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDV----------- 418
I Y G N EL+ ++ +MIRRLK+ +L LP KRR+++ +++
Sbjct: 180 IVNCINYDGCDNELELNFILSERIMIRRLKEQILPDLPSKRRKKILIEIPQGSKNKINKA 239
Query: 419 ---AEKDMRQIY-ALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPA 474
A + + QIY A E + + + + K E+E Q K N +Y ++ AK+ A
Sbjct: 240 VKTANEKLFQIYLAKQMESQYLDDEFQNLKEEQENQD---QMKRTFNFVYQETGLAKLDA 296
Query: 475 VLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHC------IRIDGGTPPASRQAL 528
V +YLE ++++ K +IFAHHQ +LD I ++ V C IRIDG R L
Sbjct: 297 VKEYLEDLMDSQVKLIIFAHHQQVLDRIEKM-----VKCDFRRQYIRIDGNVKQEERVDL 351
Query: 529 VTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSV 588
V +FQ A+LS++A G+TLTA+S VIFAEL TP ++QAEDR+HRI Q ++V
Sbjct: 352 VNQFQNNTKTTVAILSLQAASHGITLTASSHVIFAELYPTPAVMLQAEDRSHRINQNNNV 411
Query: 589 NVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
+YL+ DTVD+ +++++ K + +LDG L++ Q+
Sbjct: 412 LCHYLIGKDTVDEDIFNLLMQKYKVTSSILDGQRKDLQIDEFQV 455
>gi|71755373|ref|XP_828601.1| SNF2 DNA repair protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833987|gb|EAN79489.1| SNF2 DNA repair protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 968
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 187/549 (34%), Positives = 282/549 (51%), Gaps = 64/549 (11%)
Query: 105 KATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYD 164
K W K + +P+ L + S + +++E + P + +A ++ E
Sbjct: 103 KPMWYVKRMAYVYPIESYERLILALRKFSSHQLQVEKIPPFFFSCVQAAKD--NVLEHEK 160
Query: 165 QIPAHIE----------SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFR 214
Q+ ++ S+L PFQ+ GV F + GGR ++AD+MGLGKT+QAIA A +R
Sbjct: 161 QVKVNLSQGPDPDDVVYSQLHPFQKRGVGFVIARGGRGMIADDMGLGKTVQAIAFAHHYR 220
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
+ WP+LI+ P SL +W I ++ +IP I +++T + +
Sbjct: 221 NEWPLLIICPLSLVDNWEKEIIRFCSIPVGR-----------------IATAHTTKRFRI 263
Query: 275 DGLFN--IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
DG+ + I+ Y + L+ + S FK+VI DESH++K+ A+RT ATL + + A+ LL
Sbjct: 264 DGVHSIVIVPYSSLKCLEGV--SVTFKVVIVDESHYIKSGTAQRTTATLKLCRAAKRVLL 321
Query: 333 LSGTPALSRPIELFKQLEALY-PDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNL 388
LSGTPA+SRP+EL+ QL+A P + ++ RYC G FG+ G SN ELH L
Sbjct: 322 LSGTPAMSRPVELYSQLQAFVNPSCMPSKTQFCARYCNSFQGRFGVDCTGHSNISELHAL 381
Query: 389 MKATVMIRRLKKDVLAQLPVKRRQQVFLDVA-------EKDMRQIYALFRELEVVKGKIK 441
++ V +RR K ++ +LP K R ++L + EKD+ ++ R + G
Sbjct: 382 IQHFV-VRRTKSELANELPSKSRHLLYLYITPKEKAALEKDITKLRECLRNGLALPGLTD 440
Query: 442 ACKSEEEVQSLKFTE----------KNL-INKIYTDSAEAKIPAVLDYL----ETVIEAG 486
T K L I ++ T +A AK AV DY+ E ++E
Sbjct: 441 PLTPSAFASDPHGTPGGPPSQYSAGKQLNILELRTATARAKTTAVQDYIRGVAEQLVETN 500
Query: 487 CKFLIFAHHQPML----DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAV 542
K ++FAHH+ ML DAI + +K + I I G T A R+ L+ F+ AV
Sbjct: 501 EKMIVFAHHRVMLDGIRDAIESVNPRKPLDYILICGNTAAAQREELLNHFRTSPTCHLAV 560
Query: 543 LSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDI 602
LSM GVGL LT A+ V+F EL W P +Q EDR HRIGQ SS + YLLA T D I
Sbjct: 561 LSMLVCGVGLNLTCATMVVFTELDWNPCTHLQCEDRVHRIGQSSSCFIKYLLAEGTSDTI 620
Query: 603 VWDVVRSKL 611
+W ++++KL
Sbjct: 621 IWPLLQNKL 629
>gi|34393589|dbj|BAC83216.1| putative DNA helicase [Oryza sativa Japonica Group]
Length = 1029
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 177/562 (31%), Positives = 291/562 (51%), Gaps = 62/562 (11%)
Query: 139 IENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEM 198
I+NL + AS L K +P H+ LLPFQ +GV+F L+ GR L+ADEM
Sbjct: 29 IKNLPKFFAESCASDKEVDGLLMK---LPQHLRDALLPFQLEGVKFGLRRHGRCLIADEM 85
Query: 199 GLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQW-LNIPPSEIVVVLSQLGGSN 257
GLGKT+QAIA+A C++D PVLI+ P+ LR WA +++W + P +I +V
Sbjct: 86 GLGKTLQAIAIACCYKDEGPVLIVCPAVLRYTWAEELERWDPSFLPKDIHLVFGHQDSLE 145
Query: 258 RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKR- 316
R G + +ISY ++ +L+ +M+ + ++I DESH ++ + K
Sbjct: 146 RLGACPKAV-------------VISYQMLSRLRKSMMNRRWALMIIDESHNIRCTKKKHE 192
Query: 317 ---TAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVY-KNVHEYGNRYC---- 368
T A L + +LLSGTP+LSRP +++ Q+ L+P + N ++ N+YC
Sbjct: 193 KNETQAVLELAPNVSRIVLLSGTPSLSRPFDIYHQINMLWPHLLGSNKFDFANKYCLLHT 252
Query: 369 ----KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR 424
G + + + EL+ L+ T+MIRRLK+ +L +LP KRRQ ++L + D++
Sbjct: 253 VQGCNGRTYQDFSKGARLTELNVLLSQTLMIRRLKEHLLNELPPKRRQIIWLKLNASDIK 312
Query: 425 QIYALFR------ELEVVKGKIKACKSEE----EVQSLKFTEKNLINKIYTDSAEAKIPA 474
+ + E+ + + SEE E K + +NL + + KIP
Sbjct: 313 TAISCIKGVNTSDEIPTIASPDNSNDSEEVNMEEADGCKKSPRNLTTQ---EIGIVKIPG 369
Query: 475 VLD-YLETVI------------EAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
+ +L I ++ C K +IFAHH +LD + ++++ +RIDG T
Sbjct: 370 FSEWFLNHFIMKEPADNGSLDSQSNCQKTIIFAHHLKVLDGVQVFVTEQRIKYVRIDGST 429
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P R+ V F+ +V A++ + AGGVGL ++A V+F EL + +L+QAEDRAH
Sbjct: 430 SPRERKDAVDSFRLNPEVMVAIIGITAGGVGLDFSSAQNVVFVELPKSASELLQAEDRAH 489
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSL-EVSSSQI----RSS 635
R GQ ++VN+Y A +T+D+ W + L + +++G ++++ E+ Q+ SS
Sbjct: 490 RRGQTNAVNIYIFCARNTLDESHWLHLNQSLFRVSSLMNGKKDAIREIEVDQVYHLEESS 549
Query: 636 PAKQKTLDSFLKRCNNVDDSEH 657
++ K+ FL N+ D H
Sbjct: 550 KSEGKSQLGFLPLENHNADCGH 571
>gi|297607570|ref|NP_001060181.2| Os07g0598300 [Oryza sativa Japonica Group]
gi|255677946|dbj|BAF22095.2| Os07g0598300, partial [Oryza sativa Japonica Group]
Length = 1158
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 177/562 (31%), Positives = 291/562 (51%), Gaps = 62/562 (11%)
Query: 139 IENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEM 198
I+NL + AS L K +P H+ LLPFQ +GV+F L+ GR L+ADEM
Sbjct: 158 IKNLPKFFAESCASDKEVDGLLMK---LPQHLRDALLPFQLEGVKFGLRRHGRCLIADEM 214
Query: 199 GLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQW-LNIPPSEIVVVLSQLGGSN 257
GLGKT+QAIA+A C++D PVLI+ P+ LR WA +++W + P +I +V
Sbjct: 215 GLGKTLQAIAIACCYKDEGPVLIVCPAVLRYTWAEELERWDPSFLPKDIHLVFGHQDSLE 274
Query: 258 RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKR- 316
R G + +ISY ++ +L+ +M+ + ++I DESH ++ + K
Sbjct: 275 RLGACPKAV-------------VISYQMLSRLRKSMMNRRWALMIIDESHNIRCTKKKHE 321
Query: 317 ---TAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVY-KNVHEYGNRYC---- 368
T A L + +LLSGTP+LSRP +++ Q+ L+P + N ++ N+YC
Sbjct: 322 KNETQAVLELAPNVSRIVLLSGTPSLSRPFDIYHQINMLWPHLLGSNKFDFANKYCLLHT 381
Query: 369 ----KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR 424
G + + + EL+ L+ T+MIRRLK+ +L +LP KRRQ ++L + D++
Sbjct: 382 VQGCNGRTYQDFSKGARLTELNVLLSQTLMIRRLKEHLLNELPPKRRQIIWLKLNASDIK 441
Query: 425 QIYALFR------ELEVVKGKIKACKSEE----EVQSLKFTEKNLINKIYTDSAEAKIPA 474
+ + E+ + + SEE E K + +NL + + KIP
Sbjct: 442 TAISCIKGVNTSDEIPTIASPDNSNDSEEVNMEEADGCKKSPRNLTTQ---EIGIVKIPG 498
Query: 475 VLD-YLETVI------------EAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
+ +L I ++ C K +IFAHH +LD + ++++ +RIDG T
Sbjct: 499 FSEWFLNHFIMKEPADNGSLDSQSNCQKTIIFAHHLKVLDGVQVFVTEQRIKYVRIDGST 558
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P R+ V F+ +V A++ + AGGVGL ++A V+F EL + +L+QAEDRAH
Sbjct: 559 SPRERKDAVDSFRLNPEVMVAIIGITAGGVGLDFSSAQNVVFVELPKSASELLQAEDRAH 618
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSL-EVSSSQI----RSS 635
R GQ ++VN+Y A +T+D+ W + L + +++G ++++ E+ Q+ SS
Sbjct: 619 RRGQTNAVNIYIFCARNTLDESHWLHLNQSLFRVSSLMNGKKDAIREIEVDQVYHLEESS 678
Query: 636 PAKQKTLDSFLKRCNNVDDSEH 657
++ K+ FL N+ D H
Sbjct: 679 KSEGKSQLGFLPLENHNADCGH 700
>gi|261334482|emb|CBH17476.1| SNF2 DNA repair protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 967
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 187/549 (34%), Positives = 282/549 (51%), Gaps = 64/549 (11%)
Query: 105 KATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYD 164
K W K + +P+ L + S + +++E + P + +A ++ E
Sbjct: 103 KPMWYVKRMAYVYPIESYERLILALRKFSSHQLQVEKIPPFFFSCVQAAKD--NVLEHEK 160
Query: 165 QIPAHIE----------SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFR 214
Q+ ++ S+L PFQ+ GV F + GGR ++AD+MGLGKT+QAIA A +R
Sbjct: 161 QVKVNLSQGPDPDDVVYSQLHPFQKRGVGFVIARGGRGMIADDMGLGKTVQAIAFAHHYR 220
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
+ WP+LI+ P SL +W I ++ +IP I +++T + +
Sbjct: 221 NEWPLLIICPLSLVDNWEKEIIRFCSIPVGR-----------------IATAHTTKRFRI 263
Query: 275 DGLFN--IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
DG+ + I+ Y + L+ + S FK+VI DESH++K+ A+RT ATL + + A+ LL
Sbjct: 264 DGVHSIVIVPYSSLKCLEGV--SVTFKVVIVDESHYIKSGTAQRTTATLKLCRAAKRVLL 321
Query: 333 LSGTPALSRPIELFKQLEALY-PDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNL 388
LSGTPA+SRP+EL+ QL+A P + ++ RYC G FG+ G SN ELH L
Sbjct: 322 LSGTPAMSRPVELYSQLQAFVNPSCMPSKTQFCARYCNSFQGRFGVDCTGHSNISELHAL 381
Query: 389 MKATVMIRRLKKDVLAQLPVKRRQQVFLDVA-------EKDMRQIYALFRELEVVKGKIK 441
++ V +RR K ++ +LP K R ++L + EKD+ ++ R + G
Sbjct: 382 IQHFV-VRRTKSELANELPSKSRHLLYLYITPKEKAALEKDITKLRECLRNGLALPGLTD 440
Query: 442 ACKSEEEVQSLKFTE----------KNL-INKIYTDSAEAKIPAVLDYL----ETVIEAG 486
T K L I ++ T +A AK AV DY+ E ++E
Sbjct: 441 PLTPSAFASDPHGTPGGPPSQYSAGKQLNILELRTATARAKTTAVQDYIRGVAEQLVETN 500
Query: 487 CKFLIFAHHQPML----DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAV 542
K ++FAHH+ ML DAI + +K + I I G T A R+ L+ F+ AV
Sbjct: 501 EKMIVFAHHRVMLDGIRDAIESVNPRKPLDYILICGNTAAAQREELLNHFRTSPTCHLAV 560
Query: 543 LSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDI 602
LSM GVGL LT A+ V+F EL W P +Q EDR HRIGQ SS + YLLA T D I
Sbjct: 561 LSMLVCGVGLNLTCATMVVFTELDWNPCTHLQCEDRVHRIGQSSSCFIKYLLAEGTSDTI 620
Query: 603 VWDVVRSKL 611
+W ++++KL
Sbjct: 621 IWPLLQNKL 629
>gi|189036176|gb|ACD75438.1| AMDV4_9 [uncultured virus]
Length = 542
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 189/534 (35%), Positives = 278/534 (52%), Gaps = 76/534 (14%)
Query: 108 WNAKERLW-TFPVPFLSSAEKVLSEISG--YNVEIENLHPLV---QRAIA-----SASAA 156
WN R W T + + S + L SG +NV E + + + IA S SA
Sbjct: 29 WNPAMRRWETTDIKVVESLIQTLHNTSGEEFNVITEEVKSAIFEKKNKIAEILKKSMSAT 88
Query: 157 PDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDV 216
D+ QIP + LPFQ+ G+ F + +L+ADEMGLGKTI+ I DV
Sbjct: 89 SDI-----QIPHPVNLDYLPFQKAGIDF-ISSQKNVLVADEMGLGKTIEVIGYINLNPDV 142
Query: 217 WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDG 276
VLI+ P+SL+++W A +++WL TI++ + ++I
Sbjct: 143 QSVLIICPASLKMNWEAEMKKWL----------------VRSYDLTILNGDGLKSI---- 182
Query: 277 LFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA-------------ATLPI 323
I +Y+ V K ++L S + +++ DESH++KN +A+RT +
Sbjct: 183 --TITNYESVKKNFDLLRSQTWDLLVLDESHYIKNYKAQRTKFITGFYEGSDTSDTSKTW 240
Query: 324 IKK----AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
IK A+ +LL+GTP L+RPIELF QL L ++ KN E+ N Y + G +G G+
Sbjct: 241 IKGLKDYAKQKILLTGTPVLNRPIELFTQLRVLGNEMGKNFMEFRNSYIEMGRYGPI-GS 299
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA-------EKDMRQIYALFRE 432
N EEL ++ T MIRR KKDVL +LP K RQ + L + E + + I L +
Sbjct: 300 KNLEELQRKLRTTCMIRREKKDVLLELPDKMRQIITLPSSILSNSDMENERKVIEYLAQN 359
Query: 433 LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIF 492
++ GK++ + F E I KI SA KIP V++++E V+E K ++F
Sbjct: 360 WDMGTGKLRNS------EGFPFEE---IAKIRHSSAIKKIPYVIEHIENVLENEDKIVVF 410
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGL 552
AHH ++DAI++ F K + + G R V +FQ K + S++A GVG+
Sbjct: 411 AHHHDVVDAIYEKF--KDISVVAT-GNESLNERNDAVNKFQNDPSCKIFIGSIQAMGVGI 467
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDV 606
TLTA+STVIF E+ W PGDL QAEDR HRIGQ S+V V YL+ ND++D + D
Sbjct: 468 TLTASSTVIFTEIEWRPGDLTQAEDRLHRIGQKSTVLVQYLVVNDSIDSYMIDT 521
>gi|255547283|ref|XP_002514699.1| ATP binding protein, putative [Ricinus communis]
gi|223546303|gb|EEF47805.1| ATP binding protein, putative [Ricinus communis]
Length = 1229
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 177/519 (34%), Positives = 268/519 (51%), Gaps = 86/519 (16%)
Query: 161 EKYDQI----PAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDV 216
EK D++ P I LLPFQ DG+RF L+ GGR L+ADEMGLGKT+QAIA+A CF +
Sbjct: 194 EKVDELIGNLPRKILDVLLPFQLDGLRFGLRRGGRCLIADEMGLGKTLQAIAIAGCFMNE 253
Query: 217 WPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P+L++ P+ LR WA +++WL + PSEI +V G N + + R +
Sbjct: 254 GPILVVCPAILRFSWAEELERWLPSCLPSEIHLV---FGHQNNPAYL---TRCPRVV--- 304
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK----RTAATLPIIKKAQYAL 331
+IS+ ++ L ++ + ++I DESH ++ ++ K A L + K + +
Sbjct: 305 ----VISFKMLHHLGKSMLEREWALLIVDESHHVRCSKKKSEPNEIKAVLDVAAKVKRMV 360
Query: 332 LLSGTPALSRPIELFKQLEALYPDVY-KNVHEYGNRYC--------KGGVFGIYQGASNH 382
LLSGTP+LSRP ++F Q+ P + ++ +++ YC +G F + +
Sbjct: 361 LLSGTPSLSRPYDIFHQIN--MPGLLGQSKYDFAKTYCAIKHVPTSEGKSFQDFSRGTRL 418
Query: 383 EELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVV--KGKI 440
EEL+ L+ TVMIRRLKK V+ QLP KRRQ + + L ++ +V KG
Sbjct: 419 EELNMLLTQTVMIRRLKKHVMEQLPPKRRQIIRI------------LLKKSNIVSAKGAF 466
Query: 441 KACKSEEEVQSLKFT--EKNL-------------------INKI-YTDSAEAKIPAVLDY 478
LKFT E N +NK+ Y + AK+PA ++
Sbjct: 467 GTMSDNASEALLKFTIHEDNTLHAFTLYLHFLSGCGSFCKLNKLSYQELGIAKLPAFREW 526
Query: 479 LE-----------TVIEAGC---KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPAS 524
L ++ C K +IFAHH +LD + +L +K + +RIDG T P
Sbjct: 527 LSIHPLITESDGVAELDVNCISQKMIIFAHHHKVLDGVQELIFEKGIGFVRIDGNTLPRD 586
Query: 525 RQALVTEFQEKDD---VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHR 581
RQ+ V FQ ++ VK A++ + AGGVGL ++A V+F EL + ++QAEDRAHR
Sbjct: 587 RQSAVRSFQSSNEASIVKIAIIGVTAGGVGLDFSSAQNVVFLELPQSSSLMLQAEDRAHR 646
Query: 582 IGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
GQ ++VN+Y A DTVD+ W + L + +G
Sbjct: 647 RGQTNAVNIYIFCAKDTVDERHWQYLNKSLHRVSSTTNG 685
>gi|10176715|dbj|BAB09945.1| unnamed protein product [Arabidopsis thaliana]
Length = 1178
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 175/507 (34%), Positives = 260/507 (51%), Gaps = 74/507 (14%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
+ +P + + LLPFQ DG+RF L+ GGR +ADEMGLGKT+QAIA+A CF +L++
Sbjct: 194 ETLPRKLVNALLPFQLDGLRFGLRRGGRCFIADEMGLGKTLQAIAIAGCFISEGSILVVC 253
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+ LR WA +++WL + PS++ +V G + + +P +IS
Sbjct: 254 PAVLRFTWAEELERWLPSCLPSDVHLV---FGHQDNPAY----------LPRWPKVVVIS 300
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAK----RTAATLPIIKKAQYALLLSGTPA 338
Y ++ L+ ++ + ++I DESH L+ ++ K L + +K ++ +LLSGTP+
Sbjct: 301 YKMLQHLRTTMLEREWALLIVDESHHLRCSKKKSDPPEIKTVLDVAEKVKHIILLSGTPS 360
Query: 339 LSRPIELFKQLEALYPDVYKNVHEYGNRYC--------KGGVFGIYQGASNHEELHNLMK 390
+SRP L K+ +E+ YC +G +F + + EL+ L+
Sbjct: 361 VSRPGLLG-----------KDKYEFAKTYCEVGLVRGIQGKIFQDFSKGTRLLELNILLN 409
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVK-GKIKAC--KSEE 447
TVMIRRLK+ +L QLP KRRQ V + + + D+ A+ E + K G I KS E
Sbjct: 410 QTVMIRRLKQHLLTQLPPKRRQIVTILLKKSDIALAMAIVSEAKKQKDGAIAEVTEKSHE 469
Query: 448 EVQSLKFT------------------EKNLINKI-YTDSAEAKIPAV------------L 476
Q+ + + E L K+ Y AK+ A L
Sbjct: 470 PDQNARGSNEAGHVNAENSDGPNSDKENQLCGKLSYQQLGIAKLSAFREWLSLHPLLSGL 529
Query: 477 DYLETVIE---AGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQ 533
DY I+ + K ++FAHH +LD I + K + +RIDG T P RQ V FQ
Sbjct: 530 DYTPEEIDGDRSSTKMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQ 589
Query: 534 EKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYL 593
+VK A++ ++AGGVGL +AA V+F EL TP L+QAEDRAHR GQ S+VNVY
Sbjct: 590 FSSEVKIAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIF 649
Query: 594 LANDTVDDIVWDVVRSKLENLGQVLDG 620
A DT+D+ W + KL + DG
Sbjct: 650 CAKDTMDESNWQNLNKKLHRISSTTDG 676
>gi|6562295|emb|CAB62593.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 786
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 175/507 (34%), Positives = 260/507 (51%), Gaps = 74/507 (14%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
+ +P + + LLPFQ DG+RF L+ GGR +ADEMGLGKT+QAIA+A CF +L++
Sbjct: 194 ETLPRKLVNALLPFQLDGLRFGLRRGGRCFIADEMGLGKTLQAIAIAGCFISEGSILVVC 253
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+ LR WA +++WL + PS++ +V G + + +P +IS
Sbjct: 254 PAVLRFTWAEELERWLPSCLPSDVHLV---FGHQDNPAY----------LPRWPKVVVIS 300
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAK----RTAATLPIIKKAQYALLLSGTPA 338
Y ++ L+ ++ + ++I DESH L+ ++ K L + +K ++ +LLSGTP+
Sbjct: 301 YKMLQHLRTTMLEREWALLIVDESHHLRCSKKKSDPPEIKTVLDVAEKVKHIILLSGTPS 360
Query: 339 LSRPIELFKQLEALYPDVYKNVHEYGNRYC--------KGGVFGIYQGASNHEELHNLMK 390
+SRP L K+ +E+ YC +G +F + + EL+ L+
Sbjct: 361 VSRPGLL-----------GKDKYEFAKTYCEVGLVRGIQGKIFQDFSKGTRLLELNILLN 409
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVK-GKIKAC--KSEE 447
TVMIRRLK+ +L QLP KRRQ V + + + D+ A+ E + K G I KS E
Sbjct: 410 QTVMIRRLKQHLLTQLPPKRRQIVTILLKKSDIALAMAIVSEAKKQKDGAIAEVTEKSHE 469
Query: 448 EVQSLKFT------------------EKNLINKI-YTDSAEAKIPAV------------L 476
Q+ + + E L K+ Y AK+ A L
Sbjct: 470 PDQNARGSNEAGHVNAENSDGPNSDKENQLCGKLSYQQLGIAKLSAFREWLSLHPLLSGL 529
Query: 477 DYLETVIE---AGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQ 533
DY I+ + K ++FAHH +LD I + K + +RIDG T P RQ V FQ
Sbjct: 530 DYTPEEIDGDRSSTKMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQ 589
Query: 534 EKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYL 593
+VK A++ ++AGGVGL +AA V+F EL TP L+QAEDRAHR GQ S+VNVY
Sbjct: 590 FSSEVKIAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIF 649
Query: 594 LANDTVDDIVWDVVRSKLENLGQVLDG 620
A DT+D+ W + KL + DG
Sbjct: 650 CAKDTMDESNWQNLNKKLHRISSTTDG 676
>gi|449441079|ref|XP_004138311.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealing helicase and
endonuclease ZRANB3-like [Cucumis sativus]
Length = 1211
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 170/499 (34%), Positives = 263/499 (52%), Gaps = 52/499 (10%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRD-VW 217
+ E ++P + ++LLPFQ DG+RF LQ GGR L+ADEMGLGKT+QAIA+A C D
Sbjct: 188 VEELMKKLPDRLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAIACCLMDEEG 247
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIP-PSEIVVVLSQLGG-SNRSGFTIVSSNTKRNIPLD 275
+L++ P+ LR WA +++WL PS+I +V L + S F +
Sbjct: 248 SILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIV---------- 297
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFL----KNAQAKRTAATLPIIKKAQYAL 331
+ISY ++ +L+ + + ++I DESH + K+++ + A L + K Q+ +
Sbjct: 298 ----VISYTMLQRLRKSIFQQKWSLLIVDESHHVRCAKKSSEPEEIKAVLDLATKVQHII 353
Query: 332 LLSGTPALSRPIELFKQLEALYPDVY-KNVHEYGNRYC--------KGGVFGIYQGASNH 382
LLSGTP+LSRP ++F Q+ P + K +E+ YC +G F +
Sbjct: 354 LLSGTPSLSRPYDIFHQIN--MPGLLGKTKYEFAKTYCAVKFVSTSQGKTFKDFSKGIRL 411
Query: 383 EELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKA 442
EL+ L+K TVMIRRLK VLAQLP KRRQ + L + D+ A R EV+
Sbjct: 412 NELNVLLKQTVMIRRLKVHVLAQLPPKRRQIIRLLLKSSDIIGAKAATR--EVINCGHDR 469
Query: 443 CKSEEEVQSLKFTEKNLINKIYTDSA--------EAKIPAVLDY-LETVIEAGCKFLIFA 493
+E ++ E + + I+ + + ++D L+T + K +IFA
Sbjct: 470 NAAENSSHNICGEETDACDDIFRHTTLLWWRLWNWETLDGLMDLDLKTDSQ---KMIIFA 526
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD------VKAAVLSMKA 547
HH +LD + +L +K + +RIDG T RQ+ V FQ + VK A++ + A
Sbjct: 527 HHHKVLDGLQELMCEKGIQFVRIDGTTLARDRQSAVLLFQSSAEVXYNSCVKIAIIGITA 586
Query: 548 GGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVV 607
GGVGL ++A V+F EL +P ++QAEDR+HR GQ +VN+Y A DT D+ W +
Sbjct: 587 GGVGLDFSSAQNVVFLELPQSPSLMLQAEDRSHRRGQTKAVNIYIFCAKDTSDESHWQNL 646
Query: 608 RSKLENLGQVLDGHENSLE 626
L + DG ++++
Sbjct: 647 NKSLRRITSTTDGKYDAIQ 665
>gi|222637395|gb|EEE67527.1| hypothetical protein OsJ_24993 [Oryza sativa Japonica Group]
Length = 1174
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 176/587 (29%), Positives = 289/587 (49%), Gaps = 84/587 (14%)
Query: 139 IENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEM 198
I+NL + AS L K +P H+ LLPFQ +GV+F L+ GR L+ADEM
Sbjct: 166 IKNLPKFFAESCASDKEVDGLLMK---LPQHLRDALLPFQLEGVKFGLRRHGRCLIADEM 222
Query: 199 GLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQW-LNIPPSEIVVVLSQLGGSN 257
GLGKT+QAIA+A C++D PVLI+ P+ LR WA +++W + P +I +V
Sbjct: 223 GLGKTLQAIAIACCYKDEGPVLIVCPAVLRYTWAEELERWDPSFLPKDIHLVFGHQDSLE 282
Query: 258 RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKR- 316
R G + +ISY ++ +L+ +M+ + ++I DESH ++ + K
Sbjct: 283 RLGACPKAV-------------VISYQMLSRLRKSMMNRRWALMIIDESHNIRCTKKKHE 329
Query: 317 ---TAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVY-KNVHEYGNRY----- 367
T A L + +LLSGTP+LSRP +++ Q+ L+P + N ++ N+Y
Sbjct: 330 KNETQAVLELAPNVSRIVLLSGTPSLSRPFDIYHQINMLWPHLLGSNKFDFANKYCLLHT 389
Query: 368 ---CKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR 424
C G + + + EL+ L+ T+MIRRLK+ +L +LP KRRQ ++L + D++
Sbjct: 390 VQGCNGRTYQDFSKGARLTELNVLLSQTLMIRRLKEHLLNELPPKRRQIIWLKLNASDIK 449
Query: 425 QIYALFR------ELEVVKGKIKACKSEEEVQSLKF------------------------ 454
+ + E+ + + SEE F
Sbjct: 450 TAISCIKGVNTSDEIPTIASPDNSNDSEEVNMEEGFKISKIGLSAPYKHCAHFLVFPFHL 509
Query: 455 -----TEKNLINKIYTDSAEAKIPAVLD-YLETVI------------EAGC-KFLIFAHH 495
+K+ N + KIP + +L I ++ C K +IFAHH
Sbjct: 510 PTADGCKKSPRNLTTQEIGIVKIPGFSEWFLNHFIMKEPADNGSLDSQSNCQKTIIFAHH 569
Query: 496 QPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLT 555
+LD + ++++ +RIDG T P R+ V F+ +V A++ + AGGVGL +
Sbjct: 570 LKVLDGVQVFVTEQRIKYVRIDGSTSPRERKDAVDSFRLNPEVMVAIIGITAGGVGLDFS 629
Query: 556 AASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLG 615
+A V+F EL + +L+QAEDRAHR GQ ++VN+Y A +T+D+ W + L +
Sbjct: 630 SAQNVVFVELPKSASELLQAEDRAHRRGQTNAVNIYIFCARNTLDESHWLHLNQSLFRVS 689
Query: 616 QVLDGHENSL-EVSSSQI----RSSPAKQKTLDSFLKRCNNVDDSEH 657
+++G ++++ E+ Q+ SS ++ K+ FL N+ D H
Sbjct: 690 SLMNGKKDAIREIEVDQVYHLEESSKSEGKSQLGFLPLENHNADCGH 736
>gi|449477556|ref|XP_004155056.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealing helicase and
endonuclease ZRANB3-like [Cucumis sativus]
Length = 1241
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/525 (32%), Positives = 262/525 (49%), Gaps = 74/525 (14%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRD-VW 217
+ E ++P + ++LLPFQ DG+RF LQ GGR L+ADEMGLGKT+QAIA+A C D
Sbjct: 188 VEELMKKLPDRLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAIACCLMDEEG 247
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIP-PSEIVVVLSQLGG-SNRSGFTIVSSNTKRNIPLD 275
+L++ P+ LR WA +++WL PS+I +V L + S F +
Sbjct: 248 SILVVCPAVLRFXWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIV---------- 297
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFL----KNAQAKRTAATLPIIKKAQYAL 331
+ISY ++ +L+ + + ++I DESH + K+++ + A L + K Q+ +
Sbjct: 298 ----VISYTMLQRLRKSIFQQKWSLLIVDESHHVRCAKKSSEPEEIKAVLDLATKVQHII 353
Query: 332 LLSGTPALSRPIELFKQLEALYPDVY-KNVHEYGNRYC--------KGGVFGIYQGASNH 382
LLSGTP+LSRP ++F Q+ P + K +E+ YC +G F +
Sbjct: 354 LLSGTPSLSRPYDIFHQIN--MPGLLGKTKYEFAKTYCAVKFVSTSQGKTFKDFSKGIRL 411
Query: 383 EELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE-LEVVKGKIK 441
EL+ L+K TVMIRRLK VLAQLP KRRQ + L + D+ A RE + +
Sbjct: 412 NELNVLLKQTVMIRRLKVHVLAQLPPKRRQIIRLLLKSSDIIGAKAATREVINCGHDRNA 471
Query: 442 ACKSEEEVQSLKFTEK------NLINKIYTDSAEAKIPAVLDYLETVIEA---------- 485
A S + + + LI+ ++D + I L + E I
Sbjct: 472 AENSSHNISQFQLLFELPIFFLXLISHYFSDGGDCGI-GKLSFQELGIAKLSGFREWFSI 530
Query: 486 ------------------GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQA 527
K +IFAHH +LD + +L +K + +RIDG T RQ+
Sbjct: 531 HPIISESDGLMDLDLKTDSQKMIIFAHHHKVLDGLQELMCEKGIQFVRIDGTTLARDRQS 590
Query: 528 LVTEFQEKDD------VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHR 581
V FQ + VK A++ + AGGVGL ++A V+F EL +P ++QAEDR+HR
Sbjct: 591 AVLLFQSSAEVXYNSCVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRSHR 650
Query: 582 IGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
GQ +VN+Y A DT D+ W + L + DG ++++
Sbjct: 651 RGQTKAVNIYIFCAKDTSDESHWQNLNKSLRRITSTTDGKYDAIQ 695
>gi|339241373|ref|XP_003376612.1| domain protein, SNF2 family [Trichinella spiralis]
gi|316974660|gb|EFV58143.1| domain protein, SNF2 family [Trichinella spiralis]
Length = 737
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 183/588 (31%), Positives = 287/588 (48%), Gaps = 122/588 (20%)
Query: 73 KLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKAT--WNAKERLWTFPVPFLSSAEKVLS 130
+++ K L + G +Y P +V FR +PK +NA +R W F V + +S
Sbjct: 212 EVTAKCVLISGGRFEIHSSYHPGMVELFRSLPKEKVFYNAVQRSWAFHVDMYPVVAESIS 271
Query: 131 EISGYNVEIENLHPLVQRAIASAS--AAPDLREKYDQIPAHIESKLLPFQRDGVRFALQH 188
+ V+ + L +VQ + + + +I + I+++L PFQ + V+
Sbjct: 272 KCKP-PVKFDGLPLIVQNVLKQKKDYYCTGIEREICRIDSEIKNQLFPFQLEAVK----- 325
Query: 189 GGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
GR+L+ADEMGLGKT++A+AVA+ +R+ WP+L++ PSS++ W I+ L S +V
Sbjct: 326 KGRLLIADEMGLGKTVEALAVASYYRNEWPLLVVCPSSMKYTWVEEIENRLPFVKSNQIV 385
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNI---PLDGLFNIISYDVVLKLQNILMSSNFKIVIADE 305
VL NT R+ P D I SYD ++ L+ F +VI DE
Sbjct: 386 VL----------------NTGRDSLPNPSDCSVLITSYDFMVNQSEALIGRKFSVVILDE 429
Query: 306 SHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGN 365
SH +KN + +R ++K A+ +LLSGTPALS+P ELF Q++ + P ++KN E+G
Sbjct: 430 SHNIKNFRTQRYKVATKLLKTAKRVILLSGTPALSKPSELFTQIDCIAPRMFKNFVEFGQ 489
Query: 366 RYCKGGVFGI-------YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDV 418
RYC + + Y GASN EEL ++K T+M+RR K VL+QLP K R+ V L+
Sbjct: 490 RYCNPKMIKLGSKTVYDYSGASNLEELQLILKETIMLRRTKDQVLSQLPPKIRKVVVLN- 548
Query: 419 AEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDY 478
+Q+ L +++ +S +E F + + + ++A+AKI A ++Y
Sbjct: 549 -----KQLINL---------GLESLQSAKEKMDQSFGKHEYLLSYFAETAQAKIQATIEY 594
Query: 479 LETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDV 538
+ +IE+ KF+IFAH H I +D ++EF
Sbjct: 595 ISELIESNQKFIIFAH-----------------HMIMLDA----------ISEF------ 621
Query: 539 KAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
LS K L+QAEDRAHR+GQ++SV + YL+A T
Sbjct: 622 ----LSSKI------------------------LVQAEDRAHRVGQLNSVLIIYLVAKGT 653
Query: 599 VDDIVWDVVRSKLE--NLGQVLDGHENSLEVSSSQIRSSPAKQKTLDS 644
DD +W +++ KLE +G + D S+E P TLD+
Sbjct: 654 ADDNIWTMIKKKLEILKMGGLSDQSFQSVE--------GPNADSTLDT 693
>gi|218199966|gb|EEC82393.1| hypothetical protein OsI_26740 [Oryza sativa Indica Group]
Length = 1165
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 176/587 (29%), Positives = 288/587 (49%), Gaps = 84/587 (14%)
Query: 139 IENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEM 198
I+NL + AS L K +P H+ LLPFQ +GV+F L+ GR L+ADEM
Sbjct: 166 IKNLPKFFAESCASDKEVDGLLMK---LPQHLRDALLPFQLEGVKFGLRRHGRCLIADEM 222
Query: 199 GLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQW-LNIPPSEIVVVLSQLGGSN 257
GLGKT+QAIA+A C++D PVLI+ P+ LR WA +++W + P +I +V
Sbjct: 223 GLGKTLQAIAIACCYKDEGPVLIVCPAVLRYTWAEELERWDPSFLPKDIHLVFGHQDSLE 282
Query: 258 RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKR- 316
R G + +ISY ++ +L+ +M+ + ++I DESH ++ + K
Sbjct: 283 RLGACPKAV-------------VISYQMLSRLRKSMMNRRWALMIIDESHNIRCTKKKHE 329
Query: 317 ---TAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVY-KNVHEYGNRY----- 367
T A L + +LLSGTP+LSRP +++ Q+ L+P + N ++ N+Y
Sbjct: 330 KNETQAVLELAPNVSRIVLLSGTPSLSRPFDIYHQINMLWPHLLGSNKFDFANKYCLLHT 389
Query: 368 ---CKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR 424
C G + + + EL+ L+ T+MIRRLK+ +L +LP KRRQ + L + D++
Sbjct: 390 VQGCNGRTYQDFSKGARLTELNVLLSQTLMIRRLKEHLLNELPPKRRQIIRLKLNASDIK 449
Query: 425 QIYALFR------ELEVVKGKIKACKSEEEVQSLKF------------------------ 454
+ + E+ + + SEE F
Sbjct: 450 TAISCIKGVNTSDEIPTIASPDNSNDSEEVNMEEGFKISKIGLSAPYKHCAHFLVFPFHL 509
Query: 455 -----TEKNLINKIYTDSAEAKIPAVLD-YLETVI------------EAGC-KFLIFAHH 495
+K+ N + KIP + +L I ++ C K +IFAHH
Sbjct: 510 PTADGCKKSPRNLTTQEIGIVKIPGFSEWFLNHFIMKEPADNGSLDSQSNCQKTIIFAHH 569
Query: 496 QPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLT 555
+LD + ++++ +RIDG T P R+ V F+ +V A++ + AGGVGL +
Sbjct: 570 LKVLDGVQVFVTEQRIKYVRIDGSTSPRERKDAVDSFRLNPEVMVAIIGITAGGVGLDFS 629
Query: 556 AASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLG 615
+A V+F EL + +L+QAEDRAHR GQ ++VN+Y A +T+D+ W + L +
Sbjct: 630 SAQNVVFVELPKSASELLQAEDRAHRRGQTNAVNIYIFCARNTLDESHWLHLNQSLFRVS 689
Query: 616 QVLDGHENSL-EVSSSQI----RSSPAKQKTLDSFLKRCNNVDDSEH 657
+++G ++++ E+ Q+ SS ++ K+ FL N+ D H
Sbjct: 690 SLMNGKKDAIREIEVDQVYHLEESSKSEGKSQLGFLPLENHNADCGH 736
>gi|297733908|emb|CBI15155.3| unnamed protein product [Vitis vinifera]
Length = 1201
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 162/502 (32%), Positives = 259/502 (51%), Gaps = 62/502 (12%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQA-IAVATCFRDVWPVLILTP 224
+P + LLPFQ DGVRF L+ GGR L+ADEMGLGKT+Q + C + P+L++ P
Sbjct: 197 LPKRLLDALLPFQLDGVRFGLRRGGRCLIADEMGLGKTLQVRVTTECCDINEGPILVVCP 256
Query: 225 SSLRLHWAAMIQQWLNIP-PSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
+ LR WA +++WL P++I +V N ++ +ISY
Sbjct: 257 AILRFSWAEELERWLPFCLPADIHLVFGH-------------QNNPAHLTRCPRVVVISY 303
Query: 284 DVVLKLQNILMSSNFKIVIADESHFL----KNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
++ +L+ ++ + ++I DESH L K ++ ++ A L + K + +LLSGTP+L
Sbjct: 304 TMLHRLRKSMLEREWPLLIVDESHHLQCTKKKSEPQKIKAVLDVAMKVRRIVLLSGTPSL 363
Query: 340 SR-PIELFKQLEALYPDVY-KNVHEYGNRYC--------KGGVFGIYQGASNHEELHNLM 389
SR P ++F Q+ L+P + ++ +E+ YC +G VF + EEL+ L+
Sbjct: 364 SRLPYDIFHQINMLWPGLLGRDKYEFAKIYCAVNFVRGSQGKVFQDFSKGIRLEELNVLL 423
Query: 390 KATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACK-SEEE 448
K TVMIRRLK+ VL +LP KRRQ + L + D+ + + ++ C SE
Sbjct: 424 KQTVMIRRLKEHVLGELPPKRRQIIRLLLKRADI--------DFAIAATRVTKCDASENN 475
Query: 449 VQSLKFTEKNLINKIYTDSAE----------AKIPAVLDYL-------------ETVIEA 485
V K ++ + S+ AK+ L++L ++
Sbjct: 476 VAEEKPSDNKPDDSGGAHSSSKKLSNQQLGIAKLSGFLEWLSFHPIVADSDGVASLDMKP 535
Query: 486 GC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLS 544
C K +IFAHH +LD I + KK + +RIDG T RQ+ V F+ +VK A++
Sbjct: 536 RCLKMIIFAHHLKVLDGIQEFICKKGIGFVRIDGNTLARDRQSAVLSFRSSTEVKIAIIG 595
Query: 545 MKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVW 604
+ AGG GL ++A V+F EL +P ++QAEDRAHR GQ ++VN+Y A DT+D+ W
Sbjct: 596 ITAGGFGLDFSSAQNVVFLELPQSPSIMLQAEDRAHRRGQTNAVNIYIFCAKDTMDESHW 655
Query: 605 DVVRSKLENLGQVLDGHENSLE 626
+ L + +G ++++
Sbjct: 656 QNLNKSLRRVSYTTNGKYDAIQ 677
>gi|357116480|ref|XP_003560009.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
[Brachypodium distachyon]
Length = 1153
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 161/521 (30%), Positives = 275/521 (52%), Gaps = 47/521 (9%)
Query: 146 VQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQ 205
VQ + ++ ++ + ++P H+ LLPFQ +GV+F L+ GR L+ADEMGLGKT+Q
Sbjct: 160 VQNCGTNWASDKEVNDLLTKLPDHLRDALLPFQLEGVKFGLRRRGRCLIADEMGLGKTLQ 219
Query: 206 AIAVATCFRDVWPVLILTPSSLRLHWAAMIQQW-LNIPPSEIVVVLSQLGGSNRSGFTIV 264
AIA+A CF+D +LI+ P+ LR WA +++W + P EI +V + + +
Sbjct: 220 AIAIACCFKDEGSLLIVCPAVLRYTWAEELERWDPSFLPKEIHLVFGR-----QDSLEYL 274
Query: 265 SSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKR----TAAT 320
+ K +ISY ++ +L+ +++ + ++I DESH ++ + K T A
Sbjct: 275 DACPK--------VVVISYKMLSRLRKSMVNRRWALMIIDESHNIRCTKMKEEKNETNAV 326
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVY-KNVHEYGNRYC--------KGG 371
L + +LLSGTP+LSRP +++ Q+ L P + + E+ +YC +G
Sbjct: 327 LELAPNINRIVLLSGTPSLSRPFDIYHQINMLCPHLLGSDKFEFAKKYCSLHVARSSQGK 386
Query: 372 VFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF- 430
++ + EL+ L+ T+MIRRLK+ +L +LP KRRQ + L + + A +
Sbjct: 387 IYQDFSKGVRLTELNVLLSQTLMIRRLKEHLLNELPPKRRQIIRLKLRALGFKTTMASYI 446
Query: 431 RELEV----------VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLE 480
+E++ V K+ E EV +K+ + + AKIP ++
Sbjct: 447 QEMDTGTYSSSDTPTVATSEKSNDYEAEVGEDDVCKKSPRHFSQQEIGIAKIPGFSEWFS 506
Query: 481 TVI-------EAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
+ ++ C K +IFAHH +LD + +K ++ +RIDG + P R+ V F
Sbjct: 507 NHLIHDNPDSQSSCQKTIIFAHHLKVLDGVQVFLCEKGINFVRIDGSSLPRERKEAVDSF 566
Query: 533 QEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYY 592
+ +VK V+ + AGGVGL ++A V+F EL + +L+QAEDRAHR GQ ++VN+Y
Sbjct: 567 RSNPEVKVVVIGITAGGVGLDFSSAQNVVFLELPRSSSELLQAEDRAHRRGQTNAVNIYI 626
Query: 593 LLANDTVDDIVWDVVRSKLENLGQVLDGHENSL-EVSSSQI 632
A +T D+ W + L + V++G ++++ E+ Q+
Sbjct: 627 FCAKNTSDESHWLHLNQSLFRVSSVMNGKKDAIREIEVDQV 667
>gi|356519100|ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
[Glycine max]
Length = 1193
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 261/500 (52%), Gaps = 54/500 (10%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTP 224
++P + +LLPFQ DG+RFAL+ G R L+AD+MGLGKT+QAIA+A CF + +L++ P
Sbjct: 196 RLPRTLLERLLPFQHDGLRFALRRGARCLIADDMGLGKTLQAIAIAGCFVEEGSILVVCP 255
Query: 225 SSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
+ LR WA +++WL + P+++ +V I + R + +ISY
Sbjct: 256 AVLRYSWAEELERWLPSCLPADVHLVFGHQDNP------IYLKRSPRVV-------VISY 302
Query: 284 DVVLKLQNILMSSNFKIVIADESHFL---KNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
++ +L+ ++ + ++I DESH + K + A L + K + +LLSGTP+LS
Sbjct: 303 TMLHRLRKSMLEREWALLIIDESHHVRCTKKTEPGEIQAVLDVASKVKRIILLSGTPSLS 362
Query: 341 RPIELFKQLEALYPDVY-KNVHEYGNRYC--------KGGVFGIYQGASNHEELHNLMKA 391
RP +++ Q+ P + K +E+ YC +G F Y EEL+ L+K
Sbjct: 363 RPYDIYHQIN--MPGLLGKTKYEFAKTYCDLKYIKGIQGKFFADYSKGVRLEELNVLLKQ 420
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDM---RQIYALFR----ELEVVKGKIKACK 444
TVMIRRLK+ V+ QLP KRRQ + L + D+ + + +F E E ++
Sbjct: 421 TVMIRRLKEHVMLQLPPKRRQIIRLLIKRSDIVAAKTVVGVFNIDASERESEDVPLETLD 480
Query: 445 SEEEVQSLKFTEKNLINKI-YTDSAEAKIPAVLDY--LETVI---EAGCKFLIFAHHQPM 498
+EV S ++ L K+ Y + AK+ ++ L +I E K +IFAHH +
Sbjct: 481 EPDEVSSFIYS-TFLSGKLSYQELGIAKLSGFREWLALHPIIAGSENASKMIIFAHHHKV 539
Query: 499 LDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD------------VKAAVLSMK 546
LD + +K + +RIDG T RQ+ V F+ + VK A++ +
Sbjct: 540 LDGVQVFLCEKGISFVRIDGNTLARDRQSAVVSFRSSPEVSQPLHFSPQVIVKIAIIGIL 599
Query: 547 AGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDV 606
A G GL + A V+F EL P ++QAEDRAHR GQ ++VNVY A DT+D+ W
Sbjct: 600 AAGFGLDFSTAQDVVFLELPKCPTIMLQAEDRAHRRGQTNAVNVYIFCAKDTLDESHWKN 659
Query: 607 VRSKLENLGQVLDGHENSLE 626
+ L+ + DG ++++
Sbjct: 660 LNKSLQRVSCTTDGKYDAMK 679
>gi|26340760|dbj|BAC34042.1| unnamed protein product [Mus musculus]
Length = 904
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 138/323 (42%), Positives = 199/323 (61%), Gaps = 17/323 (5%)
Query: 314 AKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV- 372
A R+ LP+++KA+ A+LL+GTPAL RP ELF Q+EAL+P + EY RYC V
Sbjct: 2 AARSKILLPMVQKARRAILLTGTPALGRPEELFMQIEALFPQKFGTWIEYAKRYCNAHVR 61
Query: 373 -FGI-----YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI 426
FG +GASN ELH L+ +MIRRLK +VL+QLP K RQ++ D+ ++++
Sbjct: 62 YFGKRRQWDCRGASNLSELHQLLN-DIMIRRLKSEVLSQLPPKVRQRIPFDLPPAAVKEL 120
Query: 427 YALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA- 485
A F E + + + E T L+ +++ +A AK AV DY++ +++
Sbjct: 121 NASFEEWQKLMRAPNSGAME--------TVMGLMTRMFKQTAIAKAGAVKDYIKMLLQND 172
Query: 486 GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSM 545
KFL+FAHH ML A + ++ K IRIDG P + R LV +FQ+ D + A+LS+
Sbjct: 173 SLKFLVFAHHLSMLQACTEAVIESKSRYIRIDGSVPSSERIHLVNQFQKDPDTRVAILSI 232
Query: 546 KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWD 605
+A G GLT TAAS V+FAEL W PG + QAEDRAHRIGQ SSVN++YL+AN T+D ++W
Sbjct: 233 QAAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDSLMWA 292
Query: 606 VVRSKLENLGQVLDGHENSLEVS 628
++ K + G L+G + L+ +
Sbjct: 293 MLNRKAQVTGSTLNGRKEKLQAT 315
>gi|308808864|ref|XP_003081742.1| Vacuolar H+-ATPase V1 sector, subunit A (ISS) [Ostreococcus tauri]
gi|116060208|emb|CAL56267.1| Vacuolar H+-ATPase V1 sector, subunit A (ISS) [Ostreococcus tauri]
Length = 1791
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 179/538 (33%), Positives = 279/538 (51%), Gaps = 88/538 (16%)
Query: 162 KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
++ I +I L PFQ GV+FA++ GR L+AD+MG+GKT+QAIAVA +RD P+L+
Sbjct: 189 RFGTIAGNIRRALYPFQETGVKFAIRRNGRALIADQMGVGKTLQAIAVADAYRDAGPLLV 248
Query: 222 LTPSSLRLHWAAMIQQWL-NIPPSEIVVV--------LSQLGGSNRSGFTIVSSNTKRNI 272
+ P+++R WA I++WL ++ P ++ V+ L +L +R + ++ +R +
Sbjct: 249 IVPAAMRFVWADEIERWLTDVTPRQLSVIFGSGDKFLLEKLAKESREANSAAATTGRRVV 308
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFL------KNAQAKRTAATLPIIKK 326
+ SY ++ L + + + VIADESH + ++ K T +IKK
Sbjct: 309 -------VSSYHMLAPLFDEFLEVKWGCVIADESHNMHVSKSFNGSETKMTETAWKLIKK 361
Query: 327 AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH-EYGNRYC------KGGVFGIYQGA 379
A+YA+L +GTP+L++P ++F Q++AL P + E+ YC KG G
Sbjct: 362 AKYAVLTTGTPSLTKPFDMFYQIDALRPGMLGQTKWEFAEYYCDVKFDMKG--RSDVSGG 419
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR----QIYALFRELEV 435
S EL +L+ T MIRRLKKDV+ LP KRRQ V +D+ + R +I+A
Sbjct: 420 SRLLELRSLLTHTTMIRRLKKDVMGDLPPKRRQVVPIDIDQSIARVGGPKIWAKI----- 474
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAE------------------------AK 471
KA ++ + S + N++++ D E K
Sbjct: 475 ----AKAARAPRDEMSYGEEDDNILDEDERDDVEYVLNAKLCNLEKGRRVSVSQIVGMLK 530
Query: 472 IPAVLDYLETVI--EAGCKFLIFAHHQPMLDAIHQ---LFLKKKVHC--IRIDGGTPPAS 524
I ++D+LE+ + + +F+IFAHHQ +LDAI + + L+K+ +RIDG TP
Sbjct: 531 IAPIIDWLESDLLRDDSMQFVIFAHHQAVLDAIERDVCMCLEKQNRGTYVRIDGSTPSDE 590
Query: 525 RQALVTEFQEKDDVKA--------AVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAE 576
R+ LV +F+E V A A+LS+KA G GL + AS V+FAEL L QAE
Sbjct: 591 RKVLVDKFREGAAVGADGVVSVRIALLSVKAAGTGLDFSTASCVVFAELPDDASLLEQAE 650
Query: 577 DRAHRIGQVSSVNVYYLLANDTV---DDIVWDVVRSKLENLGQVLDGHEN--SLEVSS 629
R HR G S VNVY+L A D+ W + S+L+ + +DG + L+VS+
Sbjct: 651 ARVHRRGNDSGVNVYFLCARGGACSHDEDRWQRLESQLDVCKEAIDGDDARVGLDVSA 708
>gi|70944659|ref|XP_742238.1| DNA helicase [Plasmodium chabaudi chabaudi]
gi|56521100|emb|CAH78659.1| DNA helicase, putative [Plasmodium chabaudi chabaudi]
Length = 437
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/330 (38%), Positives = 206/330 (62%), Gaps = 17/330 (5%)
Query: 314 AKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGG 371
+KRT A +PIIK A+ +LLSGTPAL++P EL++Q+ ++ P+++ N +E+ +RYC
Sbjct: 1 SKRTKAIVPIIKSAKRCVLLSGTPALNKPSELYEQVSSIIPNLF-NYNEFCDRYCYKDKN 59
Query: 372 VFGI---YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA 428
++ Y G + EELH + T+MIRRLKKDVL +LP K R ++ +++ + ++ +I
Sbjct: 60 IYTRKIEYVGCKHTEELHLFLTNTIMIRRLKKDVLKELPDKLRSKIPIEIPQNELSEILL 119
Query: 429 LFRELEVVKG---------KIKACKSEEEVQSLKFTEKNL-INKIYTDSAEAKIPAVLDY 478
++LE K + E+N+ I++++ + AK+ A+ +Y
Sbjct: 120 YAKKLESKKNININDLDNISLSRFNDFNSNHDNNIDEENITISQLFKMTGYAKVKAIKEY 179
Query: 479 LETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDV 538
+ +I+A KFL+F HH+ ++D I + +KK+ IR+DG TP R+ + FQ + +
Sbjct: 180 ITYLIDADIKFLLFCHHKLVMDEIDEFLKEKKLGFIRVDGLTPIDKREVYIKNFQSDEKI 239
Query: 539 KAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQV-SSVNVYYLLAND 597
+ A+LS+ A GVGL LTAA+TV+F EL W PG +IQAEDRAHRIG ++N++YL+A +
Sbjct: 240 RIAILSITACGVGLNLTAANTVVFGELYWVPGQMIQAEDRAHRIGTTHDTINIHYLVAQN 299
Query: 598 TVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
T+D++VW ++ K L L+G E+SL V
Sbjct: 300 TIDEVVWKIINRKWNTLTTALNGAEDSLNV 329
>gi|145351304|ref|XP_001420022.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580255|gb|ABO98315.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1148
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 277/523 (52%), Gaps = 68/523 (13%)
Query: 158 DLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW 217
D+ Y++I I L FQ +GVRFAL+ GR L+AD+MG+GKT+QAIA+A +RD
Sbjct: 181 DVDAVYEKIAPRIREALYSFQEEGVRFALRRRGRALIADQMGVGKTLQAIAIADAYRDAG 240
Query: 218 PVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDG 276
P+L + P+++R WA +++WL ++ P ++ V+ G S++ +++ +K G
Sbjct: 241 PLLCVVPAAMRFVWADELERWLTDMTPRQLSVI---FGSSDKFMLDKLAAESKTAKTWTG 297
Query: 277 LFNII--SYDVVLKLQNILMSSNFKIVIADESHFLK------NAQAKRTAATLPIIKKAQ 328
++ SY ++ L ++ + VIADESH + + K T A +IK+A+
Sbjct: 298 GRRVVVTSYHMLAPLLEEFLAVKWGCVIADESHTMHVSKKYGGDETKLTDAAWRLIKRAK 357
Query: 329 YALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC------KGGVFGIYQGASNH 382
YA+L +GTP+L++P ++F Q++AL P + ++ YC KG G S
Sbjct: 358 YAVLTTGTPSLTKPFDMFYQIDALRPGILGKKWDFAEHYCDIQFDQKG--RSDVSGGSRL 415
Query: 383 EELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR--------QIYALFR--- 431
EL L+ T M+RRLK+DV+ LP KRRQ V +D+ + R +I + R
Sbjct: 416 LELRTLLTHTTMVRRLKRDVMRDLPPKRRQVVPIDITQSIARVGGPKIWSKIAKVARAPR 475
Query: 432 -ELEVVKGKIKACKS---------------EEEVQSLKFTEKNLINKIYTDSAEAKIPAV 475
+L G+ + +++ L+ ++ +++I K+ +
Sbjct: 476 DDLRYDDGEDDDAGNILEEDDEQDDIEYVLNQKIGELERGKRVSVSQIV---GMLKVEPI 532
Query: 476 LDYLETVI--EAGCKFLIFAHHQPMLDAIHQLFL-----KKKVHCIRIDGGTPPASRQAL 528
+++LE+ + + +F+IFAHHQ +LDA+ + + + +RIDG TP R+ L
Sbjct: 533 VEWLESGVLKDDSMQFVIFAHHQAVLDALEREVCVRIQNQNRGSYVRIDGSTPSDERKVL 592
Query: 529 VTEFQE----KDD----VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
V +F+E ++D V+ A+LS+KA G GL + AS VIFAEL L QAEDRAH
Sbjct: 593 VDKFREGAQTREDGVVGVRVALLSVKAAGTGLDFSTASCVIFAELPDDASLLEQAEDRAH 652
Query: 581 RIGQVSSVNVYYLLANDTV---DDIVWDVVRSKLENLGQVLDG 620
R G S VNVY+L A D+ W + S+L+ + LDG
Sbjct: 653 RRGNDSGVNVYFLCARGGACAHDEDRWARLESQLDLCREALDG 695
>gi|159479316|ref|XP_001697739.1| SNF2 superfamily protein [Chlamydomonas reinhardtii]
gi|158274107|gb|EDO99891.1| SNF2 superfamily protein [Chlamydomonas reinhardtii]
Length = 876
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 167/522 (31%), Positives = 251/522 (48%), Gaps = 77/522 (14%)
Query: 172 SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQ-AIAVATCFRDVWPVLILTPSSLRLH 230
+L +QR+GV ++ GGR+L ADEMGLGKT+Q A+ + +C+ + WP+LI+ P+SLR
Sbjct: 261 GRLFAYQREGVLAGVRFGGRVLYADEMGLGKTVQQALTLMSCYTEDWPLLIICPTSLRFA 320
Query: 231 WAAMIQQWLNIPPSEIVVVLSQLG----------------GSNRSGFTIVSSNTKRNIPL 274
W A +QQWL L Q+G GS+ + L
Sbjct: 321 WVAAVQQWLPPHLQPAPADLWQVGAVTDWDRLAAAAGIEPGSDHEEYPRGGGRAGGGGRL 380
Query: 275 DGLFNIISYDVVLKL--QNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
++SYD+ K+ Q+ + ++ +I DE H LKN +R P+++ A A+L
Sbjct: 381 RPHIAVVSYDLATKIAPQHASRAHRYRAIICDECHALKNRTTQRAQKIGPLVRAADRAVL 440
Query: 333 LSGTPALSRPIELFKQL---EALYPDVYKNVHEYGNRYCKGGVFGIYQ------------ 377
+GT L+RPIELF Q+ + L P + + EYG+RYC YQ
Sbjct: 441 CTGTAILNRPIELFTQVTQVDMLKPGLLGSYTEYGDRYCVNTANTFYQQQQQQHQTPNFP 500
Query: 378 -----GASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE 432
GA+ EL ++ VM+RR K +VL LP K R +V L E D+R++ A RE
Sbjct: 501 GQEYTGANALGELKAVLGECVMVRRRKDEVLGDLPPKIRSKVPLQPCEDDLRRVAADLRE 560
Query: 433 LEVVKGKIKACK-------SEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIE- 484
L+ V A S + +L T + Y + AK+ +L ++E
Sbjct: 561 LKRVLAAAAAGHMSGHEALSARQQHTLSHTHAQAWSAAYRATGPAKLTEAKAFLTRLLER 620
Query: 485 --AGCKFLIFAHHQPMLDAIH----QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDV 538
CK L+FAHHQ +L+ + Q+ ++ KV +RIDG TP R V FQ
Sbjct: 621 VSGPCKVLVFAHHQEVLNGLQEHLKQVRVQLKVMHMRIDGSTPAHERDKAVAAFQR---- 676
Query: 539 KAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN-- 596
+G V+F EL +P L+QAEDRAHR+GQ + V+VYYL+A
Sbjct: 677 -----------LGPRTPRVQVVVFVELDQSPSLLVQAEDRAHRVGQAAHVHVYYLMAKGY 725
Query: 597 -----DTVDDIVWDVVRSK--LENLGQVLDGHENSLEVSSSQ 631
T+D+ +W ++ K + + L+G + L S+SQ
Sbjct: 726 TLRHAGTLDEQIWAMLERKRFVCEVDLDLEGLDEQLFESASQ 767
>gi|428172225|gb|EKX41136.1| hypothetical protein GUITHDRAFT_142285 [Guillardia theta CCMP2712]
Length = 1294
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 154/501 (30%), Positives = 266/501 (53%), Gaps = 80/501 (15%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
+++P + + L P+Q +G++F L R ++ADEMGLGK++QA+AVA C D WP+L++
Sbjct: 218 ERLPMGMRACLCPYQIEGIKFVLSRSCRCMIADEMGLGKSLQALAVAACL-DAWPLLVVV 276
Query: 224 PSSLRLHWAAMIQQWLN-IPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P++LRL WA I++W+ + P++I V+ S ++ +V I+S
Sbjct: 277 PATLRLGWAEEIEKWITWLLPTDIHVIFSSTDRPPQATPKVV---------------IVS 321
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAK----RTAATLPIIKKAQYALLLSGTPA 338
Y ++ +L++ L+S +++V+ DESH L+ +A+ +T+ ++ +I+ + LLL+GTP+
Sbjct: 322 YKMLHRLRSDLLSRQWRLVVFDESHTLRTPKARADVQQTSTSIRLIRNVRRCLLLTGTPS 381
Query: 339 LSRPIELFKQLEALYPDVYKNVH-EYGNRYCKGGVFGIYQGAS--NHEELHNLMKATVMI 395
RP+++F QL+AL+ + + E+ N +C+ F Y EL+ ++ ++VM+
Sbjct: 382 PHRPMDMFLQLDALHAGLLGSSKFEFANSFCEVARFPFYSVGRCVRAHELNLILASSVML 441
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLKKD++ QLP KRR ++ + +R + A E KG EE+Q LK
Sbjct: 442 RRLKKDIMKQLPPKRRCLIYAPIDCSRLRLVNASGEE----KG--------EELQ-LKNH 488
Query: 456 EKN----LINKIYTDSAEAKIPAVLDYLE-TVIEAGC--KFLIFAHHQPMLDAIHQLFLK 508
+N + Y AK+ A ++L+ I +GC K ++FAHH+ +++ + L+
Sbjct: 489 TRNHEVLVATTAYQLVGLAKLYAAKEWLQHAAISSGCSSKIVVFAHHRRVMNELESFLLQ 548
Query: 509 KKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWT 568
V C+RIDG T R L+ +F+ + VK A++S+ A G G+ L+ AST IF
Sbjct: 549 HNVSCVRIDGETAGRERVDLLNQFRHRAHVKVALISVTASGQGVDLSVASTAIF------ 602
Query: 569 PGDLIQAEDRAHRI--GQVSSVNVYYLLANDT---VDDIV-------------------- 603
+ A R + GQ V++YYL+A DD++
Sbjct: 603 ----VGAPSRHLLVPRGQTGCVDIYYLVARSPWKHYDDLLQPHCHGRDQSQHRLSNFDMH 658
Query: 604 -WDVVRSKLENLGQVLDGHEN 623
W + LE++ V DG +N
Sbjct: 659 RWISLSRDLEDVSSVTDGPKN 679
>gi|30044094|ref|NP_835691.1| similar to DNA helicase [Rhodothermus phage RM378]
Length = 670
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 178/562 (31%), Positives = 277/562 (49%), Gaps = 76/562 (13%)
Query: 101 RKIPKAT---WNAKERLW-TFPVPFLSSAEKVLSEISG--YNVEIENL-HPLVQRAIASA 153
R IPK W+ +R+W T + + S + E + YN+ +E H L ++ S+
Sbjct: 34 RLIPKNAGWKWDPDKRVWYTTILDYASKLKGYFDEKAAQQYNLLLEEKNHKLELSSVTSS 93
Query: 154 SAAPDLREKYDQIPAHIESKLLPFQRDGVRFA---LQHGGRILLADEMGLGKTIQAIAVA 210
A +PA PFQ+ GV F + L+ADEMG GKTIQ+ V
Sbjct: 94 DFA---------VPAPTGYDYFPFQKAGVHFVTEVFKEYPGALIADEMGTGKTIQSAGVI 144
Query: 211 TCFRDVWP--VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNT 268
P VL++ P+SL+ +W +++W+ + EI+VV N F+
Sbjct: 145 NVMN---PDRVLVVCPASLKYNWERELKRWV-VHEKEIIVV-----NGNEVDFS------ 189
Query: 269 KRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK--- 325
L II+YD++ ++ + +VI DE H++KN + KR+ I+K
Sbjct: 190 -----LKNTIYIINYDILHRISE--EDYAYDLVIVDECHYIKNPKTKRSGFVKSIVKSSI 242
Query: 326 -KAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI---YQGASN 381
+ L L+GTP ++RPIEL+ LE P V+ N Y RYC G ++GASN
Sbjct: 243 EQGGKVLFLTGTPIVNRPIELYPILEMAAPKVFGNFWGYAKRYCNAYYNGYGWDFRGASN 302
Query: 382 HEELHNLMKATVMIRRLKKDVLAQLPVKRRQQV------------FLDVAE--KDMRQIY 427
EEL +++T+MIRRLKKDVL +LP K R+ V +AE ++++
Sbjct: 303 LEELQGKLRSTIMIRRLKKDVLKELPPKSRKIVPVKLNKMFAEEEIFKLAEDLQNLKNYI 362
Query: 428 ALFRELEVVKGK----IKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVI 483
++ RE E V + +A +E + F + + Y A K P DY+ +++
Sbjct: 363 SVLREFERVGVESADLAEAMAEFDEKMKVMFERVAEMRRFY---AIHKAPFAADYIVSLV 419
Query: 484 --EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
E ++FAHH + + I ++ K + RI G RQ V +FQ V
Sbjct: 420 KEEEVDGLVVFAHHHDVFEIIQKVLEAKGITYARITGEENVVQRQKAVEDFQ-SGKVDVV 478
Query: 542 VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQ-VSSVNVYYLLANDTVD 600
+ S+ A GVG+TLT A T +F EL W PG+++QAEDR HRIGQ V+++Y++A T+D
Sbjct: 479 LCSILAAGVGITLTRAKTAVFVELDWVPGNILQAEDRLHRIGQEAECVDIHYIVARHTLD 538
Query: 601 DIVWDVVRSKLENLGQVLDGHE 622
+ D + K+E + + L+ HE
Sbjct: 539 ENFADYLTRKIEIIEKALN-HE 559
>gi|126667815|ref|ZP_01738782.1| Superfamily II DNA/RNA helicase [Marinobacter sp. ELB17]
gi|126627763|gb|EAZ98393.1| Superfamily II DNA/RNA helicase [Marinobacter sp. ELB17]
Length = 877
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 190/626 (30%), Positives = 302/626 (48%), Gaps = 90/626 (14%)
Query: 68 KEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATW----NAKERLWTFPVPFLS 123
K QVP+ L G D L P A W + R + F V
Sbjct: 190 KIQVPRPEDSELLLAGGAGPDTVRSDDGLYDTIMDFPGAEWIKGKKGQSRGY-FRVAVTH 248
Query: 124 SAEKVLSEI-SGYNVEIENLHPLVQRAIA------------SASAAPDLREKYDQIPAHI 170
K++ + S Y + +L P + RAIA S ++A DL Q+P
Sbjct: 249 DTPKMVKVLNSQYGL---SLSPELPRAIAERIGKLHRDLKLSRNSAADL-----QLPVPQ 300
Query: 171 ESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLH 230
LP+Q+ G+ +A++ G L+ADE GLGKTIQA+ V+ C + + VLI+ P++L+++
Sbjct: 301 GLNYLPYQKAGIAYAVRKGN-ALIADEPGLGKTIQAVGVSNCVKAIRSVLIVVPATLKIN 359
Query: 231 WAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQ 290
W Q+W V L+ +NRS + + R+ + +I+YD+V +
Sbjct: 360 WEREWQKW-------CVKGLTTGQVTNRSASSWPTDAEGRSPNV----VVINYDLVEAHK 408
Query: 291 NILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKA-----QYALLLSGTPALSRPIEL 345
L + ++I DE+H LKN +AKRT L KK LLL+GTP LSRP E+
Sbjct: 409 ARLTRHTWDLMIVDEAHALKNDKAKRTQLILGHGKKEPGIPRHRTLLLTGTPILSRPKEI 468
Query: 346 FKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQ--------GASNHEELHNLMKATVMIRR 397
+ AL P+ + N + RYC YQ GASN EL ++A +M+RR
Sbjct: 469 WTLAHALDPEYFSNRMRFALRYCAA-----YQAEHGWNMDGASNLGELQRELRARIMVRR 523
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVK------------GKIKACKS 445
LK +VL++LP K RQ + L+ +R+ + L + + +K + +
Sbjct: 524 LKANVLSELPPKTRQIIPLENGLATLRETHVLKQAAQALKDIQRERARLDPNNEATYRTA 583
Query: 446 EEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPML----D 500
+ + ++ +++ ++A AKIP V++ +E + G K ++FAHH+ ++ D
Sbjct: 584 ADRLTDMEVAVFEQLSRQRKETALAKIPQVMELVEQALNEGSGKLILFAHHREVVEAYQD 643
Query: 501 AIHQLFLKKKVHCIR----------------IDGGTPPASRQALVTEFQEKDDVKAAVLS 544
A++ LF+K+ R + G TP RQA FQ + S
Sbjct: 644 ALNALFIKQAKAQDRETRQRIGTTQPNSLALVYGPTPKGKRQAEADRFQADPKCTVFLGS 703
Query: 545 MKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVW 604
+ A GVG+TLTAA+ V+F EL W PG + QAEDRAHRIGQ+ +V V++ + + ++D +
Sbjct: 704 IGAAGVGITLTAATKVLFGELDWVPGIVSQAEDRAHRIGQLDNVLVWHAVVDGSIDARMV 763
Query: 605 DVVRSKLENLGQVLDGHENSLEVSSS 630
+ K + L LD E +++ SS+
Sbjct: 764 RRLIEKQKVLDSALD-DEKTIQASST 788
>gi|378756194|gb|EHY66219.1| hypothetical protein NERG_00915 [Nematocida sp. 1 ERTm2]
Length = 584
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 255/466 (54%), Gaps = 57/466 (12%)
Query: 174 LLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHW-- 231
L P Q +G++ A++ R+L+ADEMGLGKT+QAI++A + + +L +
Sbjct: 126 LKPHQIEGIKIAVKRNYRVLIADEMGLGKTLQAISIARTLLETHKSNYDRCNQTKLVYIV 185
Query: 232 ----AAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVL 287
A+ +Q W+N E +S+ + FT S T +N + + + SY L
Sbjct: 186 IFAPASNVQMWIN----EAKKFISE-ESYDIKNFT-PSPPTYQNKAKNPIVLVSSYAGAL 239
Query: 288 KLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFK 347
+ ++ + IADES LKN ++KR + +P + K ++ LLLSGTPALS P EL+
Sbjct: 240 TKITKIDLNDVILGIADESQNLKNPESKRASILVPFLSKLKHVLLLSGTPALSNPNELYT 299
Query: 348 QLEALYPDVYKNVHEYGNRYCKGG------------VFGIYQGASNHEELHNLMKATVMI 395
Q++ + P ++ + EY RYC+ Y+G+ N +EL ++K VMI
Sbjct: 300 QIKIINPSLFSYL-EYHERYCRLADNHYNALNPRLKQLVKYRGSKNLDELKVILKELVMI 358
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RR+KK+ L+ + EK ++I F ++VK ++ + +LK
Sbjct: 359 RRVKKECLS-------------LGEK--KRILVTF-STDLVKKELNS--------NLKIN 394
Query: 456 EKNLINKI---YTDSAEAKIPAVLDYL-ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKV 511
K L N++ Y SA+ K+ ++ ++ E + K ++FAHH +L +I+Q F+K
Sbjct: 395 SKTLQNELLSEYNQSAKDKVSDLILFIKELKMRVKGKVIVFAHHTEILTSIYQEFIK--- 451
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
+ + I G TP A R+ + T+F+E ++ AVLS+KA GLTL A+TV+FAEL WTPGD
Sbjct: 452 NAVIITGSTPKAKRETICTKFKEDLNINLAVLSLKACSTGLTLVCATTVVFAELPWTPGD 511
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
L QAEDR +RIGQ+ +V +YYL+A+ VD +W ++R K L +
Sbjct: 512 LHQAEDRIYRIGQLETVRIYYLIAS-YVDKYMWPLLRRKNNMLNTI 556
>gi|299472392|emb|CBN77580.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 991
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 197/349 (56%), Gaps = 44/349 (12%)
Query: 100 FRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDL 159
F+ P AT++ KER W FP L + E + +S V++ P+ ++A+A+A+ A +
Sbjct: 86 FKLTPGATYDEKERRWKFP---LGAHENLAGALSRQGVQVV---PVPRQALAAATLAVEP 139
Query: 160 REKYD------------QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAI 207
+ D +P I L PFQ+ GV F L+ GR ++ADEMGLGKTIQAI
Sbjct: 140 EQGADGEKEPPVKLCEKMVPECIRKHLAPFQKQGVEFVLKKEGRAMIADEMGLGKTIQAI 199
Query: 208 AVATCFRDVWPVLILTPSSLRLHWAAMIQQWLN---IPPSEIVVVLSQLGGSNRSGFTIV 264
A + WP+LI++PSS R HW + +WL+ I +IVVV NR +V
Sbjct: 200 CCAAAYESEWPLLIVSPSSARYHWQHELLKWLDEDSITKKQIVVVSKSKQDLNRGVTKVV 259
Query: 265 SSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPII 324
IISY++V +++ L NF +V+ DE H+LKN +A RT A +P+
Sbjct: 260 ---------------IISYELVNRMKEELDLFNFGVVVCDECHYLKNQRAARTRAIVPLA 304
Query: 325 KKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC-------KGGVFGI-Y 376
KA+ A+LLSGTPALSRP ELF QL L + + ++G RYC K G FG +
Sbjct: 305 TKARRAILLSGTPALSRPSELFTQLNLLSAATWASFRDFGKRYCAGKKGKGKKGKFGADF 364
Query: 377 QGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQ 425
GAS+ ELH L++ATVM+RRLKK++L LP K+R V + V ++ R+
Sbjct: 365 SGASHIAELHALLRATVMVRRLKKNILKHLPPKQRSLVEVHVQDEGARR 413
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 123/183 (67%), Gaps = 6/183 (3%)
Query: 457 KNLINKIYTDSAEAKIPAVLDYLETVIE---AGCKFLIFAHHQPMLDAIHQLFLKK-KVH 512
++L+ K++ ++ AKIPAV+ ++ V+ G K L+FAHH+ +LDA+ Q ++ +V
Sbjct: 548 RSLLMKLFANTGTAKIPAVIRHVSDVLADEMTGGKILVFAHHRNVLDALEQSVVRTGRVE 607
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG T P RQ LV FQ V+ A+L + A G+G+TLTAAS V+FAEL WTP L
Sbjct: 608 YIRIDGRTKPKDRQDLVDTFQSNPSVRVALLGLTAAGIGITLTAASRVVFAELYWTPAQL 667
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL--DGHENSLEVSSS 630
+QAEDR HRIGQ + V V YL+A ++DD +W +++ K++ LG+++ +G N +EV SS
Sbjct: 668 LQAEDRCHRIGQATVVKVQYLVAKGSLDDALWPLIQEKIKLLGEMVEGEGEANHMEVESS 727
Query: 631 QIR 633
R
Sbjct: 728 APR 730
>gi|299471940|emb|CBN79620.1| harp (smarcal1)-related [Ectocarpus siliculosus]
Length = 1197
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/411 (34%), Positives = 222/411 (54%), Gaps = 57/411 (13%)
Query: 89 KFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQR 148
+ Y L++ ++ I + ++ RLW FP+ + K + ++G EIE+L P V+
Sbjct: 22 RHPYSNALIAVYKAISDSVFDHPNRLWHFPLGLRTEVVKKVRGVAG--TEIEDLPPFVET 79
Query: 149 AIAS----ASAAPDLREKYDQI-------PAHIESKLLPFQRDGVRFALQHGGRILLADE 197
+AS S A +E D+I P + S L FQ + +RFA++ G++LL DE
Sbjct: 80 LLASIKKDGSDALSEQEMKDEISLRMESVPEDLMSTLYQFQVECLRFAIRKKGKLLLGDE 139
Query: 198 MGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN 257
MGLGKT+QA+AVA +R+ WPVL++ PSSL+ +W +W +P G
Sbjct: 140 MGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKW--VP------------GLT 185
Query: 258 RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKL--QNILMSSNFKIVIADESHFLKNAQAK 315
+ IV + K + I+SYD+ ++ +++L F+IVIADESH+LK+ AK
Sbjct: 186 KEAIQIVR-DAKMGVRDSAQLVIVSYDLATRMVEKSLLWKGQFEIVIADESHYLKSVDAK 244
Query: 316 RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG--GVF 373
R+ A +P+++KA A+ ++GTPALSRP ELF QL+AL P ++ H + RYC G F
Sbjct: 245 RSQAVVPLMQKASRAICVTGTPALSRPAELFMQLKALMPQAFRTFHPFAVRYCAAFQGPF 304
Query: 374 GI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE 432
G+ G+SN EL +++A +M+RRLK+ +VAE L +
Sbjct: 305 GLDVTGSSNSAELKMILEAAIMVRRLKE----------------EVAE--------LMEQ 340
Query: 433 LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVI 483
E +K + + + E+ L K+L K+Y +S AKI VLD+L ++
Sbjct: 341 KEAIKSSLGSVADDAEMGRLVGQMKSLTTKLYIESGRAKIQGVLDHLRGML 391
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 78/128 (60%), Gaps = 1/128 (0%)
Query: 488 KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKA 547
K ++FAHH+ ++DA+ + + V +RIDG T RQ +V FQ V +LS+ A
Sbjct: 790 KLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITA 849
Query: 548 GGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQ-VSSVNVYYLLANDTVDDIVWDV 606
GVG+TLTAAS +FAEL WTPG + QAEDR HRIGQ +V + YL+ T+DD V
Sbjct: 850 AGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGVIST 909
Query: 607 VRSKLENL 614
+ K L
Sbjct: 910 IHRKQTTL 917
>gi|21754605|dbj|BAC04536.1| unnamed protein product [Homo sapiens]
Length = 368
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 206/364 (56%), Gaps = 29/364 (7%)
Query: 198 MGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGS 256
MGLGKTIQAI + +++ WP+LI+ PSSLR W I++W+ + P EI V+
Sbjct: 1 MGLGKTIQAIGITYFYKEEWPLLIVVPSSLRYPWTEEIEKWIPELSPEEINVI------Q 54
Query: 257 NRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKR 316
N++ +S+ +K + GL + ++ L N NFK+VI DESH++K+ A R
Sbjct: 55 NKTDVRRMST-SKVTVLGYGLLTADAKTLIDALNN----QNFKVVIVDESHYMKSRNATR 109
Query: 317 TAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FG 374
+ LPI++KA+ A+LL+GTPAL RP ELF Q+EAL+P + +Y RYC + FG
Sbjct: 110 SRILLPIVQKARRAILLTGTPALGRPEELFMQIEALFPQKFGRWTDYAKRYCNAHIRYFG 169
Query: 375 I-----YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYAL 429
+GASN ELH L+ + +MIRRLK +VL QLP K RQ++ D+ +++
Sbjct: 170 KRPQWDCRGASNLNELHQLL-SDIMIRRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTS 228
Query: 430 FRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCK 488
F E E + + E T LI +++ +A AK AV DY++ +++ K
Sbjct: 229 FEEWEKIMRTPNSGAME--------TVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLK 280
Query: 489 FLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAG 548
FL+FAHH ML A + ++ K RIDG + R LV +FQ+ D + A+LS++A
Sbjct: 281 FLVFAHHLSMLQACTEAVIENKTRYTRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAA 340
Query: 549 GVGL 552
G L
Sbjct: 341 GQDL 344
>gi|387593884|gb|EIJ88908.1| hypothetical protein NEQG_00727 [Nematocida parisii ERTm3]
Length = 582
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 172/547 (31%), Positives = 273/547 (49%), Gaps = 85/547 (15%)
Query: 104 PKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKY 163
P + +N W F + + ++S ++E + +A+A + +
Sbjct: 63 PGSNYNLSSNAWRFHISVYAG---LISNCLSMKKKVEGPPYTLIKALADSYIKKQTQAPA 119
Query: 164 DQIPAHIES-------KLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCF--- 213
I + +ES +L P Q +GV+ A + R+L+ADEMGLGKT+QAI++A +
Sbjct: 120 VNIVSRLESLDGGCVIQLQPHQIEGVQVACERNYRLLIADEMGLGKTLQAISIAKTYLQE 179
Query: 214 ---RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKR 270
+ I+ PSS W +++++ +E+ + + + +S NT
Sbjct: 180 HSNETKKGLFIVAPSSNVPMWVGEVKKYI----TEVCYDVKEWRYAQKS-------NTSG 228
Query: 271 NIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
+ L I SY+ + +M +F + IADES LKN ++KR A +P + K +
Sbjct: 229 IVAL-----ITSYNGASTYIDEIMPGDFFMGIADESQSLKNNESKRAQALVPFLTKLRSV 283
Query: 331 LLLSGTPALSRPIELFKQLEALYPDV--YKNVHEYGNRYCKGGVFGI------------Y 376
+LLSGTPALS EL+ Q+ ++P + YK+ HE RYCK Y
Sbjct: 284 ILLSGTPALSNTYELYTQISIIHPTLFSYKDYHE---RYCKISDNHYQAANPKFKHLIKY 340
Query: 377 QGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFL--DVAEKDMRQIYALFRELE 434
+G+ N +EL + V+IRR+K+D L QL KRR V D+ +K+MR
Sbjct: 341 RGSKNLDELKIAVNELVLIRRVKQDCL-QLGKKRRIHVTFISDLVKKEMRS--------- 390
Query: 435 VVKGKIKACKSEEEVQSLKFTEKNLINKI---YTDSAEAKIPAVLDYLETVI-EAGCKFL 490
++ K L N++ Y +A+ K+P +L +++ + K +
Sbjct: 391 ----------------NVPINTKTLQNELLLEYNKAAKEKLPDILCFIKQARNKTKEKII 434
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGV 550
IFAHH+ L+A L+++ K I+IDG T R+ L +F+ D+ AVLS+KA
Sbjct: 435 IFAHHKDTLNA---LYMEFKDRAIKIDGSTARQKREILCDKFRNCPDIDVAVLSLKACST 491
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
GLTL A+ VIFAEL WTPGDL QAEDR +RIGQ +V +YYL+A+ VD +W +++ K
Sbjct: 492 GLTLVCATMVIFAELPWTPGDLHQAEDRIYRIGQTQTVKIYYLIASH-VDKHMWPLLKRK 550
Query: 611 LENLGQV 617
L +
Sbjct: 551 HNTLNGI 557
>gi|442759453|gb|JAA71885.1| Putative chromatin remodeling protein harp/smarcal1 dead-box
superfamily [Ixodes ricinus]
Length = 561
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 158/463 (34%), Positives = 246/463 (53%), Gaps = 59/463 (12%)
Query: 45 PQ-GSRTLPLSVAPAPKGSL---GDFSKEQVPKLSVK-----FFLHTSGNIAAKFTYDPV 95
PQ G++ P S + GS G F + L K L + Y
Sbjct: 75 PQWGTQNSPQSWGQSRAGSCQQDGTFKADATRSLPAKTVNGSCILVSPSRFVVDVPYHQQ 134
Query: 96 LVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY--NVEIENLHPLVQRAIASA 153
++ F I ++A ++ W+F LSS +++ ++ NV + + P V +
Sbjct: 135 MIEIFXTISSRNYDAVQKRWSFA---LSSHNELVQKLKPLRPNVLVAEIPPHVLKVF--- 188
Query: 154 SAAPDLREKYD----QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAV 209
AAP E+Y+ I +E LLPFQ++GV A++ GR+L+AD+MGLGKTIQ+IAV
Sbjct: 189 EAAPT--EEYEVSLSGIDCKLEQALLPFQKEGVCTAIRRNGRLLIADDMGLGKTIQSIAV 246
Query: 210 ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTK 269
A FR+ WPVL++ PSS+R W W+ + V VL + GS++
Sbjct: 247 ACYFREEWPVLVVAPSSVRFTWKEAFLHWMPSLRDDQVTVL--VTGSDK----------- 293
Query: 270 RNIPLDGLFNIISYDVV-LKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQ 328
+ D I SYD++ K+ +I F++VI DESHF+K+ +A RT A +I KA+
Sbjct: 294 --VDKDHQVVITSYDLLSRKVDDI--RGKFQVVILDESHFIKSHKAARTKACQKVIAKAK 349
Query: 329 YALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-YQGASNHEEL 385
LLL+GTPALSRPIEL+ Q+ A+ P + ++ EYG RYC G V +G Y G+SN +EL
Sbjct: 350 RVLLLTGTPALSRPIELYTQICAVRPKCFPSIQEYGIRYCNGKVTQWGWDYSGSSNMQEL 409
Query: 386 HNLMKATVMIRRLKKDVLAQLPVKRRQQVFLD--VAEKDMRQIYALFRELEVVKGKIKAC 443
L++ ++MIRRLK DVL+QLP K+RQ V LD + + + + +E++
Sbjct: 410 QLLLEKSIMIRRLKSDVLSQLPAKQRQVVVLDPLTIKTTDKVLQHMAKEMQ--------- 460
Query: 444 KSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAG 486
E +Q ++ + ++ + ++ K A+ YL+T+ +AG
Sbjct: 461 --NESIQGMQ--RRGVLLTYFRETGLHKCKAICKYLDTLSKAG 499
>gi|120536993|ref|YP_957051.1| helicase domain-containing protein [Marinobacter aquaeolei VT8]
gi|120326827|gb|ABM21136.1| helicase domain protein [Marinobacter aquaeolei VT8]
Length = 906
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 178/570 (31%), Positives = 277/570 (48%), Gaps = 89/570 (15%)
Query: 100 FRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISG-YNVEIENLHPL--------VQRAI 150
+ K K K R F VP + ++ + Y + +E+ P ++ +
Sbjct: 265 YVKSRKGRGTTKGRAGYFRVPISETTVALIKALQHQYGLTLESHAPTLGLPTPTAIKNRL 324
Query: 151 ASASAAPDLREKYD---QIPAHIESKL--------LPFQRDGVRFALQHGGRILLADEMG 199
+ A DL + D +P H SKL LP+Q+ G+ +ALQ G L+ADE G
Sbjct: 325 TTLKATHDLSGQADLDAALPTH--SKLVAPEGLDYLPYQKAGIAYALQLGN-ALIADEPG 381
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRS 259
LGKTIQAI V+ +V +L++ P+SL+++W ++W + + V S S
Sbjct: 382 LGKTIQAIGVSNALPEVRRILVIVPASLKINWQREFEKW-DTKALSVSRVRDGRPDSWPS 440
Query: 260 GFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
G V +I++D+V + L + ++I DE+H LKN AKRT A
Sbjct: 441 GTPEVV--------------VINFDLVEQHYERLTEQPWDLLIIDEAHALKNEDAKRTKA 486
Query: 320 TL---------PIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG 370
L P I A L L+GTP L+RP E++ AL PD + + H + RYC
Sbjct: 487 ILGHGSGEKRTPGIP-ANRKLFLTGTPILNRPAEIWPLAHALDPDFFADKHRFEIRYCNA 545
Query: 371 --GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA-------- 419
FG +G+SN EL+ ++A +M+RR K VL LP K RQ + LD
Sbjct: 546 HKTEFGWNTRGSSNLPELNRQLRARIMVRRRKAQVLKDLPPKTRQIIELDRPALADHNGQ 605
Query: 420 ----EKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTE-----KNLINKIYT----- 465
E+ + ALF + ++ + + ++E + S++ T +NL+ + T
Sbjct: 606 YRRLEQATATLEALFEKRSALRTEYEHAQAETALSSVQRTRYRLQAENLVKEARTAFHQM 665
Query: 466 -----DSAEAKIPAVLDYLETVIEAGCKFLIFAHH----QPMLDAIHQLFLKKK------ 510
++A +K+P V++ +T + G K ++F HH + +DA++ F ++
Sbjct: 666 SEVRKETALSKVPQVVELAKTALANG-KIILFCHHAEVVEAYVDALNHHFKRQAGKRGTP 724
Query: 511 VHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPG 570
+ G TP RQA FQ + K V +++A GVGLTLTAA TV+FAEL W PG
Sbjct: 725 ATVAVVTGKTPNEQRQAQADRFQSDEQCKVFVGTIQAAGVGLTLTAAQTVLFAELDWVPG 784
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
++ QAEDRAHRIGQ+ V VY+ ++D
Sbjct: 785 NMNQAEDRAHRIGQLDHVLVYHTAVEGSID 814
>gi|429964074|gb|ELA46072.1| hypothetical protein VCUG_02434 [Vavraia culicis 'floridensis']
Length = 792
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 135/341 (39%), Positives = 185/341 (54%), Gaps = 34/341 (9%)
Query: 292 ILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEA 351
+ +S ++I DE H+LKN Q+KRT LP IKK +L+SGTPALSRPIEL
Sbjct: 439 LTTTSRINVIIVDECHYLKNMQSKRTRTLLPFIKKMNRVVLVSGTPALSRPIEL------ 492
Query: 352 LYPDVYK----NVHEYGNRYCKGGV-----FGIYQGASNHEELHNLMKATVMIRRLKKDV 402
YP +Y N ++Y NRYC G F ++G SN++EL +L+ +M+RR K+DV
Sbjct: 493 -YPLIYVLEGFNYNDYANRYCMDGRSRFNRFMRHKGCSNYDEL-SLVIGGMMVRRTKEDV 550
Query: 403 LAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINK 462
++ LP K R+ V L+ + G A + S+ + ++
Sbjct: 551 MSDLPRKYREHVLLECTGSTAGSGVSSTNNAGAGTGSTSA-----NITSIDDVDHTIM-A 604
Query: 463 IYTDSAEAKIPAVLDYLETVIE-----AGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRID 517
+Y +AE K+ +V+ Y+ I K +IF HH+ M+ I V I+ID
Sbjct: 605 LYAQAAEIKLSSVITYIHNYIHKHIKGTANKLVIFCHHKCMITGIINSL---DVGHIKID 661
Query: 518 GGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
G RQ LV FQ D +K AVLS+ + GL LTAASTVIF+EL W PG+L+QAED
Sbjct: 662 GSVSSTIRQRLVNSFQLDDSIKVAVLSITSANTGLNLTAASTVIFSELYWNPGNLLQAED 721
Query: 578 RAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK---LENLG 615
R HRIGQ V VY+LL TVD++VW + K LE LG
Sbjct: 722 RVHRIGQRRDVRVYFLLGKGTVDEMVWPKIVGKLGVLERLG 762
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
Query: 149 AIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIA 208
A++S + P H+++ LLPFQ+ V A+ +GGRI+LAD MGLGKTIQA++
Sbjct: 242 AVSSGAVFPTATTSNKFSFVHLKTYLLPFQKQSVNKAISNGGRIILADSMGLGKTIQALS 301
Query: 209 VATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVS 265
+A + WP+LI+ P+SL +W I+++ + V V+ +G +VS
Sbjct: 302 IALYYSLEWPLLIVAPASLLDNWRDEIEKFCGVK----VCVVRDIGDIGNGSVFVVS 354
>gi|159470465|ref|XP_001693380.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277638|gb|EDP03406.1| predicted protein [Chlamydomonas reinhardtii]
Length = 594
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 209/376 (55%), Gaps = 63/376 (16%)
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLK------NAQAKRTAATLPIIKKAQYALLL 333
++SYD V + + ++V+ DE+H++K + A+RT +PI++ A+ A+LL
Sbjct: 248 VVSYDTVSRTPEPFEALKPRMVVLDEAHYIKASGGGGSMSAQRTKMVMPIVQSAKRAVLL 307
Query: 334 SGTPALSRPIELFK---------QLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE 384
+GTPA ++P+E+ Q +AL P + ++G RY + F + G+ N E
Sbjct: 308 TGTPAANKPMEIMALLVVLRAQPQPQALVPKAKIHQKDFGARYARQDKFNKFIGSRNEAE 367
Query: 385 LHNLMKAT-VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC 443
L+ L+ T VMIRRLK +VL LP KRRQQV + G +
Sbjct: 368 LNRLLLGTGVMIRRLKSEVLKHLPPKRRQQVGRE-------------------GGWVAGV 408
Query: 444 KSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA--GCKFLIFAHHQPMLDA 501
++ E Q N I +++ +A+ K AV +Y E ++E KFL+F +
Sbjct: 409 GAQREQQ-------NEIMQLWRQNAKLKGAAVAEYCEDLLEGEDPPKFLLFGEGR----- 456
Query: 502 IHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVI 561
K + IRIDG TP R L +FQE++DVK A+LS+KA GVGLT T +S V+
Sbjct: 457 ------KLRFKYIRIDGDTPGEDRNRLTQKFQEEEDVKVALLSIKAAGVGLTFTRSSLVV 510
Query: 562 FAELSWTPGDLIQAEDRAHRIGQ-VSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
F+ELSW PGD+ QAEDR HRIGQ +SVN++YLL +VD+I+WD ++SKL ++G+ LDG
Sbjct: 511 FSELSWIPGDIQQAEDRCHRIGQAATSVNIHYLLVRGSVDEIMWDCLQSKLGSVGKALDG 570
Query: 621 HENSLEVSSSQIRSSP 636
S + I++ P
Sbjct: 571 -------SGAYIKAQP 579
>gi|290984089|ref|XP_002674760.1| predicted protein [Naegleria gruberi]
gi|284088352|gb|EFC42016.1| predicted protein [Naegleria gruberi]
Length = 566
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 148/430 (34%), Positives = 223/430 (51%), Gaps = 63/430 (14%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTP 224
++P+++ + +LPFQ++G+ +A+ GR++L DEMGLGKT+QA+ +A+ + WP+LI+ P
Sbjct: 156 RLPSNLYNNILPFQKEGIEYAISRDGRVMLCDEMGLGKTLQALGIASFYPKEWPMLIIGP 215
Query: 225 SSLRLHWAAMIQQWLN------------------IPPSEIVVVLSQLGGSNRSGFTIVSS 266
SL +W + W++ + P +V SQ G V
Sbjct: 216 CSLHNNWRRELNTWIDAEWLKKHMGKEFNFTGDSLDPYICIVDSSQ-------GLAKVIE 268
Query: 267 NTKRNIPLDGLFNIISYDVVLKLQNILMSS------NFKIVIADESHFLKNAQAKRTAAT 320
T+ N P L IISYD+ K S +F I+I DESH LKN +KRT
Sbjct: 269 ETREN-PKKYLVYIISYDLASKNAEDENSDAVKWLLDFSIIITDESHMLKNDGSKRTQNI 327
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEAL-----YPDVYKNVHEYGNRYC--KGGVF 373
+P+++ A+ +L+SGT + SRPIELF Q++AL E+G RYC K F
Sbjct: 328 IPLLRSAKRLVLISGTASPSRPIELFTQMKALLCGPKSKKTLLKKTEFGYRYCDLKTNFF 387
Query: 374 --GIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFR 431
Y+G EL+ L+ ++MIRRLK+DVL QLP KRR +L + ++D+ F
Sbjct: 388 TGADYRGNRFLSELNLLLSRSIMIRRLKRDVLTQLPPKRRYLTYLSLPDEDIGPHRLTFE 447
Query: 432 ELEVVKGKIKACKSEEEVQSLKFTEKNL-INKIYTDSAEAKIPAVLDYLETVIEAGCKFL 490
KGK +L+F ++ I + + +A AK V Y + G KF+
Sbjct: 448 NFNQRKGK-----------NLRFDPNDIEILQKFNLTAIAKQKTVARYARYTFKKGEKFI 496
Query: 491 IFAHHQPMLDAIHQLFLK----------KKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
IFAHH+ +++AI + K KK+ +RIDG TP R A+ EF+E DVK
Sbjct: 497 IFAHHRSVMNAIEEEIKKEIEEVEKNEGKKLKFVRIDGETPVEQRHAISQEFREDPDVKV 556
Query: 541 AVLSMKAGGV 550
A+LS+ G+
Sbjct: 557 AILSIAVAGM 566
>gi|412992577|emb|CCO18557.1| SNF2 super family [Bathycoccus prasinos]
Length = 1344
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 165/545 (30%), Positives = 273/545 (50%), Gaps = 95/545 (17%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFR-DVWPVLIL 222
++IP K+ FQ +GV++ L GGR+++AD+MG+GKT+QAIA+ C+ PVLI+
Sbjct: 182 NRIPKETLEKMYKFQIEGVKYGLSRGGRVMIADQMGVGKTLQAIALMCCYEVKEGPVLIV 241
Query: 223 TPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN-- 279
P+S+R WA +++W+ +I P ++VVV G + + + K+N +
Sbjct: 242 APASMRTVWANELERWIPDIGPEDVVVV---EGSTAKWDLEALGEAYKKNEREGREYKGK 298
Query: 280 ----IISYDVVLKLQNILMSSNFKIVIADESHFLKN----AQAKRTAATLPIIK-KAQYA 330
+ SY ++ L+ ++ N+ +I DESH L ++A TA ++K +++ A
Sbjct: 299 RKIAVSSYHMLSNLRTSFLNINWGTIICDESHVLSTSVYGSEAAYTAIATQLLKTRSRRA 358
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCK---------GGVFGIYQGASN 381
+L +GTP+L +P ++F QL++L P+++ E+G YC+ G F G
Sbjct: 359 ILCTGTPSLVKPFDIFNQLDSLRPNMFGTKQEFGVNYCRLVLAQASRSGNKFWKSLGGRR 418
Query: 382 HEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAE------KDMRQIYALFR-ELE 434
ELH L+K VMIRRLK +V+ QLP KRRQ ++LD++ K+ + +AL R +L
Sbjct: 419 LNELHTLLKHAVMIRRLKCEVMDQLPPKRRQVIYLDISSEFTHWMKEHAKKFALLRKQLG 478
Query: 435 VVKGK----------------------IKACKSEEEVQSLKFTEKNLINKIYTDSAEA-- 470
V +G + + EE+ EK+ +N + EA
Sbjct: 479 VGEGGDDEREHRYVVSDEDDEDEEPIVVSQRNTFEEIDE----EKDDLNIVTDTDGEAQA 534
Query: 471 ----KIPAVLDYLET--VIEAGCKFLIFAHHQPMLDAIH----QLFLKKKVHCIRIDGGT 520
K+ + +LE +I+ + ++F HH +LD I+ ++ +++ C +DG T
Sbjct: 535 IGKLKVKKAVKFLEESILIDKSQQVVVFGHHHSVLDEIYAGLQKVLSPEEIVC--VDGRT 592
Query: 521 PPASRQALVTEFQ-------EKD-------DVKAAVLSMKAGGVGLTLTAASTVIFAELS 566
R+ V +F E+D V+ AV + VG+ L++ASTV F EL
Sbjct: 593 DAVERRERVDKFYGGKSQGFEEDGKTPSPAKVRVAVFGITL-AVGIDLSSASTVCFVELP 651
Query: 567 WTPGDLIQAEDRA---HRIGQVS--SVNVYYLLAND---TVDDIVWDVVRSKLENLGQVL 618
P DL+QAEDRA R G+ S VN+YY +A D W + K+E +
Sbjct: 652 QKPADLLQAEDRAWRRERNGKNSKTCVNIYYCIAKAEGCAFDTDRWQRLGRKIEQNTMMT 711
Query: 619 DGHEN 623
DG ++
Sbjct: 712 DGSDD 716
>gi|397642908|gb|EJK75533.1| hypothetical protein THAOC_02744 [Thalassiosira oceanica]
Length = 977
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/350 (39%), Positives = 198/350 (56%), Gaps = 25/350 (7%)
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYK-----NVHEYGNRYC--KGGVF 373
+PI++ ++ LLLSGTPAL+RP+EL+ QL +L P + EY RYC K F
Sbjct: 1 MPILQSSKRCLLLSGTPALNRPVELWPQLLSLDPKGRMFGKGMSYTEYTKRYCNAKRTRF 60
Query: 374 GI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDV---AEKDMRQIYAL 429
G +G S EEL+ ++ VMIRRLK DVL LP K+R V + + E++ R +
Sbjct: 61 GWDVKGVSRPEELNQSLR-RVMIRRLKADVLQDLPAKQRSIVPVGIDKERERECRDNITM 119
Query: 430 FRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAG--- 486
I +++E + F + L+N+ Y S AK PA +Y+ +E
Sbjct: 120 LGAAREAVMSISLDDADDEANAANFEARQLLNQAYQTSGVAKAPATTEYILDWLEGSDPS 179
Query: 487 CKFLIFAHHQPMLDAIHQLFLKK---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVL 543
K ++FAHH+ ++D I KK K+ +RIDG PPA R V +FQ + + A+L
Sbjct: 180 QKLVVFAHHKQVIDYIETTISKKYKGKLGMMRIDGSVPPAERALRVKKFQNNKNCRLAIL 239
Query: 544 SMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAND---TVD 600
S+ A GVGLTLTAAS ++FAEL W PG L QAEDR HRIGQ +SVNV Y + D +VD
Sbjct: 240 SVTAAGVGLTLTAASNIVFAELHWVPGVLAQAEDRCHRIGQANSVNVMYCICKDEDLSVD 299
Query: 601 DIVWDVVRSKLENLGQVLDGHE----NSLEVSSSQIRSSPAKQKTLDSFL 646
I+W ++ K+ +LG+V+DG + N+ EV S S + ++ L +F
Sbjct: 300 MILWRMLSRKVGSLGRVVDGQKGSCLNAEEVDGSSKISGKSVEEELQNFF 349
>gi|410969384|ref|XP_003991176.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1,
partial [Felis catus]
Length = 737
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/352 (38%), Positives = 200/352 (56%), Gaps = 33/352 (9%)
Query: 77 KFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY- 135
+ L + A Y L + F+++ ++AK R W+F L K+++++
Sbjct: 336 RCVLISRARFEADIGYSEHLTALFKQMDSRNYDAKTRRWSF---LLEEHNKLIAQVRCLP 392
Query: 136 NVEIENLHPLVQRAIAS-----ASAAPDLREKYD--QIPAHIESKLLPFQRDGVRFALQH 188
V+++ L + A AS + P+ + D + + + S LLPFQR GV FA+
Sbjct: 393 QVQLDPLPKTLTLAFASQLEKTSPCVPETIPEADLSGVDSKLVSSLLPFQRVGVNFAIAK 452
Query: 189 GGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIV 247
GR+LLAD+MGLGKTIQAI +A +R WP+L++ PSS+R W +WL ++ P I
Sbjct: 453 RGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDRIN 512
Query: 248 VVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESH 307
VV++ G +R GL NI+S+D++ KL+ L + FK+VI DESH
Sbjct: 513 VVVT---GKDRL--------------TAGLVNIVSFDLLSKLEKQL-KTPFKVVIIDESH 554
Query: 308 FLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRY 367
FLKN + R A +PI+K A+ +LLSGTPA+SRP EL+ Q+ + P + H +G RY
Sbjct: 555 FLKNIKTARCRAAMPILKVAKRVILLSGTPAMSRPAELYTQIIGVRPTFFPQFHAFGLRY 614
Query: 368 C--KGGVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFL 416
C K +G Y G+SN EL L++ VM+RRLK DVLAQLP K+R+ V +
Sbjct: 615 CDAKQQPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLAQLPAKQRKMVVI 666
>gi|323448985|gb|EGB04877.1| hypothetical protein AURANDRAFT_1482 [Aureococcus anophagefferens]
Length = 411
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 230/456 (50%), Gaps = 64/456 (14%)
Query: 174 LLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAA 233
LLP+Q + V FA++ GGR+ L DEMGLGKT QA+ + + + WPVL++ P ++ W
Sbjct: 1 LLPYQVEAVGFAMERGGRVFLNDEMGLGKTAQALTLMRQYPNDWPVLVVAPKAVLTQWEQ 60
Query: 234 MIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVL---KLQ 290
+ +W+ S + +L+ D I +YD+ LQ
Sbjct: 61 EVHRWI---ASNVQTILTSWN-------------------YDSQICICTYDIFRANRTLQ 98
Query: 291 NILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLE 350
+ ++ VI DESH K+ KR +P++ +A + LL+GTPA + +L+ QL+
Sbjct: 99 APPGGAQWRCVILDESHKCKDPSTKRAKEIMPVVMRADHVALLTGTPAPAGANDLWSQLK 158
Query: 351 ALYPDVYKNVHEYGN----RYCKGGVFGIYQGASNHE-----------ELHNLMKATVMI 395
+ P ++ + N RYC IY G E E++ L+K T+ +
Sbjct: 159 MVLPKAAQDHMPFHNQWQQRYCV--CKEIYTGLRTIENWTGFNPGTQTEVNGLLK-TMQM 215
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +VL QLP K+R ++L+ + + L + E ++ K + +++E +++
Sbjct: 216 RRLKTEVLTQLPEKQRHVLYLEASPGAANKASGLKAKFEALRNKDEILAADQEPPCVEWV 275
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLK-KKVHCI 514
+++ + D + + K ++FAHH+ +LD + F K K I
Sbjct: 276 KEHF----FEDDNDTQ----------------KIIVFAHHREVLDRLEAGFQKIKGATTI 315
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
R+DG P A R+ + F+ + A+LSM GL +T AST++FAE++W+P D +Q
Sbjct: 316 RVDGSVPGAQREERIKRFKTDATCRVALLSMGTCSNGLNMTEASTILFAEMTWSPTDHMQ 375
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
AEDR HR+ Q ++ N+YY + +++ ++ +++K
Sbjct: 376 AEDRIHRVSQTNACNIYYAMLPNSLGSFMFRRLQAK 411
>gi|313212367|emb|CBY36356.1| unnamed protein product [Oikopleura dioica]
Length = 534
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 140/430 (32%), Positives = 229/430 (53%), Gaps = 20/430 (4%)
Query: 113 RLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIES 172
RLW F + KV+ + + +V R + A D +P + +
Sbjct: 105 RLWVFDLNCYHDFMKVVQNSRIQRLTVNPFPTIVTRYLRQKPA--DTTAVTPNVPEKLLT 162
Query: 173 KLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWA 232
L PFQR+GV ++ GG+ +LADEMGLGKTIQA+A+A +R WP+LI+ PSS++ +W
Sbjct: 163 ALYPFQREGVDQIIRRGGKAILADEMGLGKTIQALALAAHYRKDWPLLIVAPSSVKFNWL 222
Query: 233 AMIQQWLNIPPSEIVVVLSQLG---GSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKL 289
+ W+ S+ +++ G R+ +V ++ + + ++ +
Sbjct: 223 IELSNWIGEIVSKDSILVLYTGKDVAKIRNTLKVVITSYEMTTKIVNSGKHMTDTSIFSE 282
Query: 290 QNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQL 349
+N S F++VI DESH++K A A+R +T I A L LSGTPAL++PIEL Q+
Sbjct: 283 END-RKSRFRMVILDESHYIKTATAQRAKSTKLICNGAARVLCLSGTPALAKPIELHSQI 341
Query: 350 EALYPDVYKNVHEYGNRYC---KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQL 406
E + D++ N H +G RYC K Y G+ N +EL+ ++ T+MIRRLK VL L
Sbjct: 342 EVVSKDLFSNRHSFGQRYCAAYKSKYGWNYSGSDNLQELNLILSKTIMIRRLKSQVLKDL 401
Query: 407 PVKRRQQVFLDVAEKDM-RQIYALFRELEVVKGKI-KACKSEEEVQSL--KFTEKN---- 458
P K R+ +++ V + M ++ +F+ ++ + ++ K E E++ L KF E +
Sbjct: 402 PPKIRKIIYMKVTDSPMIKKCNKIFQNIQKLPAQMTKNDFKEMELEKLSDKFEEADSSPL 461
Query: 459 -LINKIYTDSAEAKIPAVLDYL-ETVIEAGCKFLIFAHHQPMLDAIHQ-LFLKKKVHCIR 515
+ NK Y + +AKI AV +YL E + K ++FAHH+ ++D++ Q + K K + I+
Sbjct: 462 TIWNKWYCATGDAKIKAVSEYLIEKLENESEKIIVFAHHRAVIDSLEQNISPKIKGNLIK 521
Query: 516 IDGGTPPASR 525
I G T R
Sbjct: 522 ITGSTRSDDR 531
>gi|340058903|emb|CCC53274.1| putative putative SNF2 DNA repair protein [Trypanosoma vivax Y486]
Length = 703
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 151/466 (32%), Positives = 236/466 (50%), Gaps = 57/466 (12%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
+P + + L Q +G+ AL GGR L ADEMG+GKT+QAI R +PVLI+ P+
Sbjct: 175 LPKKLFAALHQHQINGILQALSFGGRALFADEMGVGKTLQAIGTVVALR-AFPVLIVCPA 233
Query: 226 SLRLHWAAMIQQWLN--IPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
+LR W+ +++WL + +I V+ S S F N K I S+
Sbjct: 234 ALRFMWSEEVEKWLMEVVELDDIHVITSS------SDFLPAKENPK--------IVITSF 279
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKN-----AQAKRTAATLPIIKKAQYALLLSGTPA 338
+ L L +K ++ DESH L A+ T+ + K A++ LLLSGTP+
Sbjct: 280 HMASLLATHLQGRRWKCLVVDESHMLHTTVDDCGDARYTSLLCELGKHAKHCLLLSGTPS 339
Query: 339 LSRPIELFKQLEALYPDVYK-NVHEYGNRYCKGGVFGIYQ--GASNHEELHNLMKATVMI 395
+ P +L+ Q++ L P + + E+ RYC+ ++ + ELH+L++ T MI
Sbjct: 340 PTTPFDLYNQIDTLVPGLLGLSRFEFALRYCRIEFTPHFKPRECTRSTELHSLLRTTCMI 399
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK + L LP K Q+V L VAE +M L+V K + +E +
Sbjct: 400 RRLKTETLIDLPSK--QRVLLRVAEHEMC--------LDVAKPPFQKTYAE------NWM 443
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
+KN KI V+D+L + K ++FAHH +LD + + +K V CIR
Sbjct: 444 KKN-----------DKIGGVVDFL---LSKHNKLVLFAHHIALLDMLTKHVSEKGVSCIR 489
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
+DG TP SR +++ F + + A++ + A GVG+ LT AS +FAEL + QA
Sbjct: 490 VDGNTPTHSRAEILSMFN-SGETRVAIMGITACGVGIQLTGASCALFAELPPDVTWMQQA 548
Query: 576 EDRAHRIGQVSSVNVYYLLANDTV-DDIVWDVVRSKLENLGQVLDG 620
EDR HR GQ +V +Y++ + ++ D ++ + S + + QV DG
Sbjct: 549 EDRLHRPGQKKNVTFFYVIGSGSLFDSAHFNRLSSSFQAVRQVTDG 594
>gi|307564877|ref|ZP_07627402.1| SNF2 family N-terminal domain protein [Prevotella amnii CRIS 21A-A]
gi|307346413|gb|EFN91725.1| SNF2 family N-terminal domain protein [Prevotella amnii CRIS 21A-A]
Length = 477
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 138/469 (29%), Positives = 242/469 (51%), Gaps = 31/469 (6%)
Query: 169 HIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLR 228
H+ + P+Q +G+RF +++ RIL+ DE GLGKT+Q+I + + +P L++ PSSL+
Sbjct: 8 HLRIEPYPYQAEGIRFGIENK-RILIGDEPGLGKTLQSIGIVDT-ANAYPCLVICPSSLK 65
Query: 229 LHWAAMIQQWLNIPPSEIVV---VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDV 285
++W +++ + S +V+ V + G + G V+ ++ +++I
Sbjct: 66 INWQREFEKFTD--KSALVLDNSVQTTWGYLLKMGVHKVAIVNYESLRKYFVWDIKGCRK 123
Query: 286 VLKLQNILMSSN---FKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
+L++++ FK +I DESH +K+ A++T + ++ LLSGTP ++RP
Sbjct: 124 SFRLKDVVFHPAIKVFKSIIIDESHRVKDPSAQQTIFAKGLSVGKEWITLLSGTPVVNRP 183
Query: 343 IELFKQLEALYPDVYKNVHEYGNR------YCKGGVFGIYQGASNHEELHNLMKATVMIR 396
+L QL + ++E+G R YC A EL N + ++ MIR
Sbjct: 184 EDLIAQLS-----IMGRLNEFGGRSQFVADYCTDPKDKDATPAVPLSELSNKLYSSCMIR 238
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKF 454
R K VL QLP K R +++D++ ++ A L LE + C E + ++
Sbjct: 239 REKTKVLPQLPDKTRTDLYVDISNREEYNTAATNLVAYLE----QYTECTDWEIRRKMRM 294
Query: 455 TEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
+ + + KI +D++ T +E+G K ++F ++D + + F K +
Sbjct: 295 EALVKFMTLRALATKGKIAQAIDFISTFLESGKKLIVFCSLHEIVDELCKTFPKA----V 350
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
+ G ++QA V FQ ++ + + S+KA GVGLTLTAAS V F EL WT D Q
Sbjct: 351 TVTGRDSAVNKQAAVDAFQTGENTRLIICSIKAAGVGLTLTAASDVAFCELPWTMADCCQ 410
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
EDRAHRIGQ +VN YYLL T+D+ ++ +++ K ++++ ++
Sbjct: 411 CEDRAHRIGQNDNVNCYYLLGRGTIDNTIYSLIQRKKSIAKEIMNSEDD 459
>gi|281207984|gb|EFA82162.1| SNF2-related domain-containing protein [Polysphondylium pallidum
PN500]
Length = 498
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 169/272 (62%), Gaps = 6/272 (2%)
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G SN EL NL +MIRR K +VL +LP RR+++ ++V + +M++I A+ ++
Sbjct: 9 YFGLSNPVEL-NLYLERIMIRRKKDEVLTELPEMRREKIMVEVKKSEMKKIKAVMENIKS 67
Query: 436 VKGKIKACKSEEE---VQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIF 492
+ K++ + V S K+L +++ D+ K+ A+ ++E +E KFLIF
Sbjct: 68 ARQKMEESSKDNNRKGVNSEGGKRKSLYTQLFRDTGLGKMAAISKFIEDKLEDNSKFLIF 127
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGL 552
AHH+ ++D I QL KKKV I+IDG TP +R LV FQ + +K A+LS+ A G GL
Sbjct: 128 AHHKTVMDGIEQLVKKKKVEYIKIDGTTPAHARSNLVNIFQTDEKIKVAILSITAAGTGL 187
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
TLTAAS IFAEL WTPG L+QAE R HR GQ SV + YL+ +T+D+ +W ++ SK +
Sbjct: 188 TLTAASVAIFAELYWTPGVLMQAEARVHRFGQNRSVLIQYLVGINTIDESIWSMLESKKD 247
Query: 613 NLGQVLDGHENSLEVSSSQ--IRSSPAKQKTL 642
LG++LDG ++LE + ++S+P + ++
Sbjct: 248 VLGRILDGESDTLEFEKGEQILQSTPHENDSI 279
>gi|293372914|ref|ZP_06619283.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CMC
3f]
gi|298480929|ref|ZP_06999124.1| SNF2 family domain-containing protein [Bacteroides sp. D22]
gi|292631982|gb|EFF50591.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CMC
3f]
gi|298272952|gb|EFI14518.1| SNF2 family domain-containing protein [Bacteroides sp. D22]
Length = 578
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 165/587 (28%), Positives = 278/587 (47%), Gaps = 88/587 (14%)
Query: 89 KFTYDPVLVSAFRKIP-KATWNAKERLWTFPV-----PFLSSAEKVLSEISGYNVEIENL 142
+F Y P LV + IP K ++ +R W + P A + + + V++
Sbjct: 16 QFEYHPKLVEVIKMIPSKPRYDGTDRAWLVSINDTRYPIGRDANWYVRAFAQWAVQMRYC 75
Query: 143 HPLVQRAIAS------ASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLAD 196
+ +R + P + E Y + + +Q +GV++A++H R D
Sbjct: 76 STVKEREVTEDINYDIPPMKPFVGEHYMLLQPY------EYQLEGVQYAIEHK-RCFFGD 128
Query: 197 EMGLGKTIQAIAV-------ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVV 249
+ GLGKT+QAI A + + +PVL++ P++L+++W +++ + + I+
Sbjct: 129 QPGLGKTLQAICAVVKAHKEAPIYGESFPVLVICPAALKVNWQREFKKFAGM--NSII-- 184
Query: 250 LSQLGGSNRSGF-TIVSSNTKRNIPLDGLFNIISYDVV-------------LKLQNILMS 295
L NR + + PL +F I +Y+ + L +++I
Sbjct: 185 ---LDDRNRQSWQSFYECKKSDGNPLCEVF-ITNYESLNKFFVKAVNKESKLTMKSIAFD 240
Query: 296 ---SNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEAL 352
S F+ VI DESH K+++ +++ I K +Y L+GTP ++ +L +QL+ L
Sbjct: 241 QRVSLFRSVIIDESHKCKSSKTQQSKYVEGICKGKRYIFALTGTPVVNNNTDLLQQLKIL 300
Query: 353 YP-DVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRR 411
+ + Y RYC G + ASN +EL+ + T RR K VL QLP K R
Sbjct: 301 GRLEDFGGYSRYVERYCDGP-----KQASNVKELNWRLWNTCFFRREKSKVLTQLPDKTR 355
Query: 412 QQVFLDV--------AEKDMRQIYALFRELEVVKGKIKACKSEEEVQ----SLKFTEKNL 459
Q + +D+ AE DM + ++ S+E+VQ + L
Sbjct: 356 QYLTVDITTTKEYKAAEADMVKYLKKYKNA-----------SDEQVQKSMNGAVMVQMQL 404
Query: 460 INKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGG 519
+ +I SA KI AV +++ VI+ G K ++F + + ++ + + F K + + G
Sbjct: 405 LKQI---SARGKIKAVCEFVHDVIDGGEKLILFGYLKEVVAELKKEFPK----AVTVTGS 457
Query: 520 TPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRA 579
+Q V FQ D K +L+ K+GG GLTLTAAS V F E WT D QAEDRA
Sbjct: 458 DSVNQKQYAVDSFQNNPDCKLIILNFKSGGTGLTLTAASRVAFIEFPWTFSDCEQAEDRA 517
Query: 580 HRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
HR GQ ++VN YY L DT+D ++DV+++K +N+ + G ++ +E
Sbjct: 518 HRNGQKNNVNCYYFLGKDTIDKYMYDVIQTK-KNIANGVTGTDDQVE 563
>gi|237721132|ref|ZP_04551613.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229449967|gb|EEO55758.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 578
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 165/587 (28%), Positives = 278/587 (47%), Gaps = 88/587 (14%)
Query: 89 KFTYDPVLVSAFRKIP-KATWNAKERLWTFPV-----PFLSSAEKVLSEISGYNVEIENL 142
+F Y P LV + IP K ++ +R W + P A + + + V++
Sbjct: 16 QFEYHPKLVEVIKMIPSKPRYDGTDRAWLVSINDTRYPIGRDANWYVRAFAQWAVQMRYC 75
Query: 143 HPLVQRAIAS------ASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLAD 196
+ +R + P + E Y + + +Q +GV++A++H R D
Sbjct: 76 STVKEREVTEDINYDIPPMKPFVGEHYMLLQPY------EYQLEGVQYAIEHK-RCFFGD 128
Query: 197 EMGLGKTIQAIAV-------ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVV 249
+ GLGKT+QAI A + + +PVL++ P++L+++W +++ + + I+
Sbjct: 129 QPGLGKTLQAICAVVKAHKEAPIYGESFPVLVICPAALKVNWQREFKKFAGM--NSII-- 184
Query: 250 LSQLGGSNRSGF-TIVSSNTKRNIPLDGLFNIISYDVV-------------LKLQNILMS 295
L NR + + PL +F I +Y+ + L +++I
Sbjct: 185 ---LDDRNRQSWQSFYECKKSDGSPLCEVF-ITNYESLNKFFVKAVNKESKLTMKSIAFD 240
Query: 296 ---SNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEAL 352
S F+ VI DESH K+++ +++ I K +Y L+GTP ++ +L +QL+ L
Sbjct: 241 QRVSLFRSVIIDESHKCKSSKTQQSKYVEGICKGKRYIFALTGTPVVNNNTDLIQQLKIL 300
Query: 353 YP-DVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRR 411
+ + Y RYC G + ASN +EL+ + T RR K VL QLP K R
Sbjct: 301 GRLEDFGGYSRYVERYCDGP-----KQASNVKELNWRLWNTCFFRREKSKVLTQLPDKTR 355
Query: 412 QQVFLDV--------AEKDMRQIYALFRELEVVKGKIKACKSEEEVQ----SLKFTEKNL 459
Q + +D+ AE DM + ++ S+E+VQ + L
Sbjct: 356 QYLTVDITTTKEYKAAEADMVKYLKKYKNA-----------SDEQVQKSMNGAVMVQMQL 404
Query: 460 INKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGG 519
+ +I SA KI AV +++ VI+ G K ++F + + ++ + + F K + + G
Sbjct: 405 LKQI---SARGKIKAVCEFVHDVIDGGEKLILFGYLKEVVAELKKEFPK----AVTVTGS 457
Query: 520 TPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRA 579
+Q V FQ D K +L+ K+GG GLTLTAAS V F E WT D QAEDRA
Sbjct: 458 DSVNQKQYAVDSFQNNPDCKLIILNFKSGGTGLTLTAASRVAFIEFPWTFSDCEQAEDRA 517
Query: 580 HRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
HR GQ ++VN YY L DT+D ++DV+++K +N+ + G ++ +E
Sbjct: 518 HRNGQKNNVNCYYFLGKDTIDKYMYDVIQTK-KNIANGVTGTDDQVE 563
>gi|407424939|gb|EKF39207.1| SNF2 DNA repair protein, putative [Trypanosoma cruzi marinkellei]
Length = 1001
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 158/493 (32%), Positives = 241/493 (48%), Gaps = 59/493 (11%)
Query: 148 RAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAI 207
R +A +S + + +PA + S L Q DG+ AL GGR L ADEMG+GKT+QAI
Sbjct: 206 REVAFSSRVSNPFHLTELLPARLLSALHQHQIDGICKALAFGGRALFADEMGVGKTLQAI 265
Query: 208 AVATCFRDVWPVLILTPSSLRLHWAAMIQQWLN--IPPSEIVVVLSQLGGSNRSGFTIVS 265
+P LI+ P++LR W +++WL I +I V+ S S F V+
Sbjct: 266 GTVAALH-AFPTLIVCPAALRHMWVEEVEKWLTELIELEDIHVITSS------SQFLSVN 318
Query: 266 SNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA-----QAKRTAAT 320
K I SY + L + S + V+ DESH L A T+
Sbjct: 319 DAPK--------VVITSYHMASILATQMKSREWCCVVVDESHTLHTTLDVSNDAHYTSLV 370
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNV-HEYGNRYCKGGV---FGIY 376
+ K+++Y LLLSGTP+L+ P +LF Q++ L + +E+ +YC+ F +
Sbjct: 371 CNLGKRSKYCLLLSGTPSLASPFDLFNQIDTLSGGLLGETRYEFALQYCRTEFSPHFKVC 430
Query: 377 QGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVV 436
+ N E+H+L+ AT MIRRLK + L LP K Q++ V EK I+ +E+
Sbjct: 431 ECVRN-VEVHSLLVATCMIRRLKSETLIDLPSK--QRILFRVPEK---AIHVQRKEMH-- 482
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQ 496
K Y+ S E K +++ ++ +++ K ++FAHH
Sbjct: 483 -----------------------FQKEYSLSWERKRDEIMELVDFLLKKYAKVVLFAHHT 519
Query: 497 PMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTA 556
+LD + K+KV IRIDG TP SR AL++ F + D + A++ + A VG+ LTA
Sbjct: 520 KLLDILMVHVRKQKVSWIRIDGSTPVYSRAALLSRFNQ-GDARVAIIGITACAVGIHLTA 578
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLL-ANDTVDDIVWDVVRSKLENLG 615
AS +FAEL + QAEDR HR GQ V +Y++ AN D + + +++
Sbjct: 579 ASCALFAELPPDATWMQQAEDRLHRPGQEKHVVFFYIVGANSFFDSERFARLCRSFQSVR 638
Query: 616 QVLDGHENSLEVS 628
+ DG +SL S
Sbjct: 639 RTTDGVSSSLTAS 651
>gi|407859780|gb|EKG07156.1| SNF2 DNA repair protein, putative [Trypanosoma cruzi]
Length = 984
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 160/493 (32%), Positives = 243/493 (49%), Gaps = 59/493 (11%)
Query: 148 RAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAI 207
R +A AS P+ + +PA + S L Q DG+ AL GR L ADEMG+GKT+QAI
Sbjct: 157 REVALASRVPNPFHLSELLPARLLSALHQHQIDGICKALAFCGRALFADEMGVGKTLQAI 216
Query: 208 AVATCFRDVWPVLILTPSSLRLHWAAMIQQWLN--IPPSEIVVVLSQLGGSNRSGFTIVS 265
+P LI+ P++LR W +++WL I +I V+ S S F +S
Sbjct: 217 GTVAALH-AFPTLIVCPAALRHMWVEEVERWLAELIELEDIHVITSS------SQFLSLS 269
Query: 266 SNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLK-----NAQAKRTAAT 320
+ K I SY + L + S + V+ DESH L ++ A T+
Sbjct: 270 NAPK--------VVITSYHMASILATQMKSREWCCVVVDESHTLHTTLDASSDAHYTSLV 321
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNV-HEYGNRYCKGGV---FGIY 376
+ K+++Y LLLSGTP+L+ P +LF Q++ L + +E+ RYC+ F +
Sbjct: 322 CNLGKRSKYCLLLSGTPSLTTPFDLFNQIDTLSDGLLGETRYEFALRYCRTEFSPHFKVC 381
Query: 377 QGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVV 436
+ N ELH+L+ AT MIRRLK + L LP K Q++ V EK +
Sbjct: 382 ECVRN-VELHSLLVATCMIRRLKSETLIDLPSK--QRILFRVPEK-------------AI 425
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQ 496
G+ K ++E Y S E+K +++ ++ +++ K ++FAHH
Sbjct: 426 HGQRKEMYFQKE---------------YALSWESKRDEIMELVDFLLKKYPKVVLFAHHI 470
Query: 497 PMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTA 556
+LD + K KV IRIDG TP SR A ++ F + D + A++ + A VG+ LTA
Sbjct: 471 KLLDCLMVHVGKLKVSWIRIDGSTPIYSRAASLSRFNQ-GDARVAIIGITACAVGIQLTA 529
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLL-ANDTVDDIVWDVVRSKLENLG 615
AS +FAEL + QAEDR HR GQ V +Y++ AN D + + +++
Sbjct: 530 ASCALFAELPPDATWMQQAEDRLHRPGQEKHVVFFYIVGANSFFDSERFARLCRSFQSVR 589
Query: 616 QVLDGHENSLEVS 628
+ DG +SL S
Sbjct: 590 RTTDGVPSSLTAS 602
>gi|423218721|ref|ZP_17205217.1| hypothetical protein HMPREF1061_01990 [Bacteroides caccae
CL03T12C61]
gi|392626338|gb|EIY20384.1| hypothetical protein HMPREF1061_01990 [Bacteroides caccae
CL03T12C61]
Length = 556
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 160/556 (28%), Positives = 260/556 (46%), Gaps = 41/556 (7%)
Query: 85 NIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHP 144
N F Y P +V R+IP ++ ++W P E+++ +I + EN++
Sbjct: 9 NFELSFKYKPSIVDRIRQIPGRRFDGARKVWIVPTRSRVDLERMIYQIQQF----ENINW 64
Query: 145 LVQRAIASASAAPDLREKYD-QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKT 203
+ A D+ E D IP ++ + P+Q G+ L+ R + DE GLGKT
Sbjct: 65 VSGTTKKEEDIAYDVPELPDLTIPHSLKIQPYPYQLKGIARGLELK-RFMNCDEPGLGKT 123
Query: 204 IQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTI 263
+Q+IA + +P L++ PSSL+++W ++W + +V+ ++ R +T
Sbjct: 124 LQSIATIN-LANAFPCLVICPSSLKINWQ---REWEKFTDKKAMVLTDKV----RDTWTF 175
Query: 264 VSSNTKRNIPLDGLFNIISYDV---------VLKLQNILMSSN-FKIVIADESHFLKNAQ 313
+ + ++ Y V L+ S N FK VI DESH K+A
Sbjct: 176 FYQTGMHQVFIVNYESLKKYFVQRIKKAEGWTLRDVEFRNSINLFKSVIIDESHRCKSAS 235
Query: 314 AKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYP-DVYKNVHEYGNRYCKGGV 372
++ I ++ + L+GTP ++RP +L QL L D + + NRYC G
Sbjct: 236 TQQAKFCKGICTGKEWVIELTGTPVVNRPKDLIPQLAILNRMDDFGGYKPFVNRYCSGQ- 294
Query: 373 FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE 432
+ ASN +EL+ + M RR K VL LP K RQ ++ E R+ Y + E
Sbjct: 295 ----REASNLKELNFNLWKYCMFRREKSLVLTDLPDKIRQ---VNTCEITNRKEY-MDAE 346
Query: 433 LEVVK--GKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFL 490
+++ K K E+ ++L+ IN + SA K+ V+++++ E G K +
Sbjct: 347 CDLIMYLQKYKDADDEKIEKALRGEVMVRINILRQISARGKVRDVIEFVKDFRENGKKII 406
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGV 550
+F ++D + + F + + G P +Q V FQ + S+KA GV
Sbjct: 407 LFCSLHEVVDQLKRYF----PTAVSVTGRESPDMKQRAVDAFQNNPKTDIIICSIKAAGV 462
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
GLTLTA+S V F E WT D Q EDRAHRIGQ SV YY L T+D+ V+ +++ K
Sbjct: 463 GLTLTASSNVAFVEFPWTYADCCQCEDRAHRIGQKDSVTCYYFLGRRTIDEKVYRIIQEK 522
Query: 611 LENLGQVLDGHENSLE 626
+N+ + G +E
Sbjct: 523 -KNIANAVTGSTEDIE 537
>gi|71409128|ref|XP_806927.1| SNF2 DNA repair protein [Trypanosoma cruzi strain CL Brener]
gi|70870808|gb|EAN85076.1| SNF2 DNA repair protein, putative [Trypanosoma cruzi]
Length = 697
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 160/493 (32%), Positives = 241/493 (48%), Gaps = 59/493 (11%)
Query: 148 RAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAI 207
R +A AS P+ + +PA + S L Q DG+ AL GR L ADEMG+GKT+QAI
Sbjct: 157 REVALASRVPNPFHLSELLPARLLSALHQHQIDGICKALAFCGRALFADEMGVGKTLQAI 216
Query: 208 AVATCFRDVWPVLILTPSSLRLHWAAMIQQWLN--IPPSEIVVVLSQLGGSNRSGFTIVS 265
+P LI+ P++LR W +++WL I +I V+ S S F V+
Sbjct: 217 GTVAALH-AFPTLIVCPAALRHMWVEEVERWLAELIELEDIHVITSS------SQFLSVN 269
Query: 266 SNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLK-----NAQAKRTAAT 320
K I SY + L + S + V+ DESH L ++ A T+
Sbjct: 270 DAPK--------VVITSYHMASILATQMKSREWCCVVVDESHTLHTTLDASSDAHYTSLV 321
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNV-HEYGNRYCKGGV---FGIY 376
+ K+++Y LLLSGTP+L+ P +LF Q++ L + +E+ RYC+ F +
Sbjct: 322 CDLGKRSKYCLLLSGTPSLASPFDLFNQIDTLSDGLLGETRYEFALRYCRTEFSPHFKVC 381
Query: 377 QGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVV 436
+ N ELH+L+ AT MIRRLK + L LP K Q++ V EK +
Sbjct: 382 ECVRN-VELHSLLVATCMIRRLKSETLIDLPSK--QRILFRVPEKP-------------I 425
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQ 496
G+ K ++E Y S E+K +++ ++ +++ K ++FAHH
Sbjct: 426 HGQRKEMYFQKE---------------YALSWESKRDEIMELVDFLLKKYPKVVLFAHHI 470
Query: 497 PMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTA 556
+LD + K KV IRIDG TP SR A ++ F + D + A++ + A VG+ LTA
Sbjct: 471 KLLDCLMVHVGKLKVSWIRIDGNTPIYSRAASLSRFNQ-GDARVAIIGITACAVGIQLTA 529
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLL-ANDTVDDIVWDVVRSKLENLG 615
AS +FAEL + QAEDR HR GQ V +Y++ AN D + + ++
Sbjct: 530 ASCALFAELPPDATWMQQAEDRLHRPGQEKHVVFFYIVGANSFFDSERFARLCRSFHSVR 589
Query: 616 QVLDGHENSLEVS 628
+ DG +SL S
Sbjct: 590 RTTDGVPSSLTAS 602
>gi|423299567|ref|ZP_17277592.1| hypothetical protein HMPREF1057_00733 [Bacteroides finegoldii
CL09T03C10]
gi|408473376|gb|EKJ91898.1| hypothetical protein HMPREF1057_00733 [Bacteroides finegoldii
CL09T03C10]
Length = 578
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 165/583 (28%), Positives = 277/583 (47%), Gaps = 80/583 (13%)
Query: 89 KFTYDPVLVSAFRKIP-KATWNAKERLWTFPV-----PFLSSAEKVLSEISGYNVEIENL 142
+F Y P LV + IP K ++ +R W + P A + S + V++
Sbjct: 16 QFEYHPKLVEVIKMIPSKPRYDGTDRAWLVSINDTRYPIGRDANWYVRAFSQWAVQMRFC 75
Query: 143 HPLVQRAIAS------ASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLAD 196
+ +R + P + E Y + + +Q +GV++A++H R D
Sbjct: 76 STVKEREVTEDINYDIPPMKPFVGEHYMLLQPY------EYQLEGVQYAIEHK-RCFFGD 128
Query: 197 EMGLGKTIQAIAV-------ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVV 249
+ GLGKT+QAI A + + +PVL++ P++L+++W +++ + + I+
Sbjct: 129 QPGLGKTLQAICAVVKAHKEAPIYGESFPVLVICPAALKVNWQREFKKFAGM--NAII-- 184
Query: 250 LSQLGGSNRSGF-TIVSSNTKRNIPLDGLFNIISYDVVLK-------------LQNILMS 295
L NR + + PL +F I +Y+ + K +++I
Sbjct: 185 ---LDDRNRQSWQSFYECKKSDGSPLCEVF-ITNYESLNKFFVRAVDKESKFTMKSIAFD 240
Query: 296 ---SNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEAL 352
S F+ VI DESH K+++ ++ I K +Y L+GTP ++ +L +QL+ L
Sbjct: 241 QRVSLFRSVIIDESHKCKSSKTQQGKFVEGICKGKRYVFALTGTPVVNNNTDLIQQLKIL 300
Query: 353 YP-DVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRR 411
+ + Y RYC G + ASN +EL+ + T RR K VL QLP K R
Sbjct: 301 GRLEDFGGYSRYVERYCDGP-----KQASNVKELNWRLWNTCFFRREKSKVLTQLPDKTR 355
Query: 412 QQVFLDV--------AEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKI 463
Q + +D+ AE DM + L+ K A + ++ + + L+ +I
Sbjct: 356 QYLTVDITTTKEYKAAEADM------VKYLKKYKNASDA-QVQKSMNGAVMVQMQLLKQI 408
Query: 464 YTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
SA KI AV +++ VI+ G K ++F + + ++ + + F K + + G
Sbjct: 409 ---SARGKIKAVCEFVHDVIDGGEKLILFGYLKEVVAELKKEFPK----AVTVTGSDNVN 461
Query: 524 SRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIG 583
+Q V FQ D K +L+ K+GG GLTLTAAS V F E WT D QAEDRAHR G
Sbjct: 462 QKQYAVDSFQNNPDCKLIILNFKSGGTGLTLTAASRVAFIEFPWTFSDCEQAEDRAHRNG 521
Query: 584 QVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
Q ++VN YY L DT+D ++DV+++K +N+ + G ++ +E
Sbjct: 522 QKNNVNCYYFLGKDTIDKYMYDVIQTK-KNIANGVTGTDDQVE 563
>gi|423225144|ref|ZP_17211611.1| hypothetical protein HMPREF1062_03797 [Bacteroides cellulosilyticus
CL02T12C19]
gi|423286419|ref|ZP_17265270.1| hypothetical protein HMPREF1069_00313 [Bacteroides ovatus
CL02T12C04]
gi|423296206|ref|ZP_17274291.1| hypothetical protein HMPREF1070_02956 [Bacteroides ovatus
CL03T12C18]
gi|392633600|gb|EIY27542.1| hypothetical protein HMPREF1062_03797 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392670816|gb|EIY64294.1| hypothetical protein HMPREF1070_02956 [Bacteroides ovatus
CL03T12C18]
gi|392675106|gb|EIY68548.1| hypothetical protein HMPREF1069_00313 [Bacteroides ovatus
CL02T12C04]
Length = 478
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 242/474 (51%), Gaps = 31/474 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
+++ H+ + +QR+G+ + L+H R+++ DE GLGKT+Q+I + + +P L++
Sbjct: 2 NRLKHHLRVEPYDYQREGIVYGLEHR-RLIIGDEPGLGKTLQSIGIVDT-ANAYPCLVIC 59
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
PSSL+++W +++ + + VVL + + + + + + L +
Sbjct: 60 PSSLKINWQREFEKFTD----KSAVVLDNAVRTTWNYLLSMGVHQVAVVNYESLRKYFVW 115
Query: 284 DV-----VLKLQNILMSSN---FKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
D+ + +L++++ FK +I DESH +K+ A++T T + ++ +LLSG
Sbjct: 116 DIKAESKLFRLKDVVFCPQIQMFKSIIIDESHRVKDPSAQQTIFTKGLSVGKEWIILLSG 175
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNR------YCKGGVFGIYQGASNHEELHNLM 389
TP ++RP +L QL + ++++G R YC + A EL +
Sbjct: 176 TPVVNRPEDLIAQLS-----IMNRLNDFGGRGKFIADYCTDPKDKDAEPAVPLSELSRQL 230
Query: 390 KATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEV 449
T MIRR K VL QLP K R +++D++ + A +L + C E
Sbjct: 231 YDTCMIRREKAKVLPQLPDKTRVDLYVDISNSAEYNLAA--SDLATYLQEYTECTDWEIR 288
Query: 450 QSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKK 509
+ ++ + + + + KI +D+++T +++G K ++F ++D + ++F K
Sbjct: 289 RKMRMEALVRFMTLRSLATKGKIAQAVDFIKTFLDSGKKLIVFCSLHEIVDELQRVFPKA 348
Query: 510 KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTP 569
+ + G ++QA V FQ +V+ + S+KA GVGLTLTA+S V F EL+WT
Sbjct: 349 ----VTVTGRDSAINKQASVDAFQNNPNVQLIICSIKAAGVGLTLTASSNVAFIELAWTY 404
Query: 570 GDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
D Q EDRAHRIGQ +V YYLL T+D ++ ++ K ++++ ++
Sbjct: 405 ADCCQCEDRAHRIGQKDNVTCYYLLGRGTIDHTIYSLIHRKKSIASEIMNSDDD 458
>gi|284046270|ref|YP_003396610.1| helicase [Conexibacter woesei DSM 14684]
gi|283950491|gb|ADB53235.1| helicase domain protein [Conexibacter woesei DSM 14684]
Length = 726
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 171/563 (30%), Positives = 268/563 (47%), Gaps = 94/563 (16%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPV-PFLSSAEKVLSEISGYNVEIENLHPLVQRAI 150
+DP AF P N ER T PV P+L E + + I+ + VE+ +
Sbjct: 189 WDPTAGVAFDDFPG---NEGER--TVPVDPWL--LEPLDAFIALHEVEV---------SY 232
Query: 151 ASASAAPDLREKYDQ------------------IPAHIESKLLPFQRDGVRFALQHGGRI 192
++ A LRE++D+ + A + L PFQ GVR+ L R
Sbjct: 233 SATLALAKLREEHDRAATAIRASRATEAEPIAAVDARLGGTLEPFQWAGVRYVLD-ARRA 291
Query: 193 LLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQ 252
LADE GLGKT++A+A A D +PV+++ P+SL+L+W ++WL P V V+
Sbjct: 292 FLADEQGLGKTVEALA-AVEADDAYPVVVVCPASLKLNWERETRRWL---PHRSVAVI-- 345
Query: 253 LGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA 312
++ +P I++Y+VV + L ++ DE+H+ KN
Sbjct: 346 --------------EGRQAVPPTAEITIVNYEVVDNHRETLARLRPGALVIDEAHYCKNP 391
Query: 313 QAKRTAATLPI---IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCK 369
AKRT A + + + + L L+GTP L+ P EL QL V + ++G+
Sbjct: 392 SAKRTRAVRRLAESMGREKLRLALTGTPVLNHPDELISQLR-----VLGRLDDFGS---- 442
Query: 370 GGVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQ--- 425
G F ++G E LH ++ +RRLK +VL QLP KR QV + VA + R+
Sbjct: 443 GARFKQQFRGPLTEERLHWHLRRRCFVRRLKSEVLPQLPAKR--QVVVPVALDNEREYRL 500
Query: 426 ----IYALFRE----LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLD 477
+ RE L ++ KI A +++ + + + +I +A K+ A L
Sbjct: 501 AERDVIRWLREQPLDLSELRAKIAAT-----LRAKRLAQLGALQRI---AARGKLHAALA 552
Query: 478 YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD 537
++ + +G ++FA H + DA+ + F H + DG T +R+A V FQ+ D
Sbjct: 553 WIHDFLASGEPLVVFARHVEVQDAVLERF-ADAAHLLGRDGAT---AREATVRAFQQPDG 608
Query: 538 VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAND 597
+ V + + G+TLT AS V F EL WTP QAEDR HRIGQ +V +YLLA
Sbjct: 609 PQLIVAATQVAAQGITLTRASNVAFLELEWTPAMHDQAEDRCHRIGQHDAVTAWYLLAAR 668
Query: 598 TVDDIVWDVVRSKLENLGQVLDG 620
T+D+ + +++ K + V DG
Sbjct: 669 TIDETMAHLIQRKRGIVAAVTDG 691
>gi|393907875|gb|EFO16766.2| hypothetical protein LOAG_11737 [Loa loa]
Length = 562
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 227/449 (50%), Gaps = 63/449 (14%)
Query: 74 LSVKFFLHTSGNIAAKFT-YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEI 132
+SV F L S + +FT + P +VS + IP + + + W+FP+ + + EK L +
Sbjct: 154 VSVIFKLINSKSFQVQFTPFSPSVVSILKAIPSKVYLPEIKAWSFPLEDICTVEKALQSL 213
Query: 133 SGYNVEIENLHP-LVQRAIASASAAPDLREKYDQIPAHIESKLL----PFQRDGVRFALQ 187
++EIE +V+ + + L E + HIE L+ P+QR GV + +
Sbjct: 214 DDVSLEIEKFSDHVVKTLLTYGKSNVGLNEP--NLEKHIEKTLVDALFPYQRRGVMYGVM 271
Query: 188 HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIV 247
GR+LLADEMGLGK+IQA+ +A +R P + EIV
Sbjct: 272 KRGRLLLADEMGLGKSIQALGIARNWRVFLPDV-----------------------DEIV 308
Query: 248 VVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESH 307
++ GS+R + TK+ + I+SYD+++ Q+ L+ +FK +I DESH
Sbjct: 309 IIEK---GSDR----LPVKKTKQTVV------IMSYDLMVSKQSHLVEYDFKAIIFDESH 355
Query: 308 FLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRY 367
LK++ A+RT A I KKA +LL+GTPALSRP+ELF Q+ + ++ N ++ RY
Sbjct: 356 LLKDSNAQRTKAATNISKKALRIILLTGTPALSRPVELFSQIRIIDSKMFPNYRDFAIRY 415
Query: 368 CKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR 424
C G G + +G +N +EL ++ +VM+RRLKKDVL LPVKRR+ V L
Sbjct: 416 CDGKRGKYSFEAKGCTNSDELAIILTGSVMLRRLKKDVLNDLPVKRREVVNLTDDS---- 471
Query: 425 QIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDY-LETVI 483
IYA +L K K + T+ + + Y ++ AK +V Y ++
Sbjct: 472 -IYANISKLREAKAAYSGAKDND-------TKHQRLVEYYYETGIAKARSVARYIIDHYF 523
Query: 484 EAGC---KFLIFAHHQPMLDAIHQLFLKK 509
G K LIFAHHQ +LD I KK
Sbjct: 524 YDGAPKRKLLIFAHHQVVLDMISMDVAKK 552
>gi|312092341|ref|XP_003147303.1| hypothetical protein LOAG_11737 [Loa loa]
Length = 552
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 227/449 (50%), Gaps = 63/449 (14%)
Query: 74 LSVKFFLHTSGNIAAKFT-YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEI 132
+SV F L S + +FT + P +VS + IP + + + W+FP+ + + EK L +
Sbjct: 154 VSVIFKLINSKSFQVQFTPFSPSVVSILKAIPSKVYLPEIKAWSFPLEDICTVEKALQSL 213
Query: 133 SGYNVEIENLHP-LVQRAIASASAAPDLREKYDQIPAHIESKLL----PFQRDGVRFALQ 187
++EIE +V+ + + L E + HIE L+ P+QR GV + +
Sbjct: 214 DDVSLEIEKFSDHVVKTLLTYGKSNVGLNEP--NLEKHIEKTLVDALFPYQRRGVMYGVM 271
Query: 188 HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIV 247
GR+LLADEMGLGK+IQA+ +A +R P + EIV
Sbjct: 272 KRGRLLLADEMGLGKSIQALGIARNWRVFLPDV-----------------------DEIV 308
Query: 248 VVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESH 307
++ GS+R + TK+ + I+SYD+++ Q+ L+ +FK +I DESH
Sbjct: 309 IIEK---GSDR----LPVKKTKQTVV------IMSYDLMVSKQSHLVEYDFKAIIFDESH 355
Query: 308 FLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRY 367
LK++ A+RT A I KKA +LL+GTPALSRP+ELF Q+ + ++ N ++ RY
Sbjct: 356 LLKDSNAQRTKAATNISKKALRIILLTGTPALSRPVELFSQIRIIDSKMFPNYRDFAIRY 415
Query: 368 CKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR 424
C G G + +G +N +EL ++ +VM+RRLKKDVL LPVKRR+ V L
Sbjct: 416 CDGKRGKYSFEAKGCTNSDELAIILTGSVMLRRLKKDVLNDLPVKRREVVNLTDDS---- 471
Query: 425 QIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDY-LETVI 483
IYA +L K K + T+ + + Y ++ AK +V Y ++
Sbjct: 472 -IYANISKLREAKAAYSGAKDND-------TKHQRLVEYYYETGIAKARSVARYIIDHYF 523
Query: 484 EAGC---KFLIFAHHQPMLDAIHQLFLKK 509
G K LIFAHHQ +LD I KK
Sbjct: 524 YDGAPKRKLLIFAHHQVVLDMISMDVAKK 552
>gi|329764968|ref|ZP_08256555.1| SNF2-related protein [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138505|gb|EGG42754.1| SNF2-related protein [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 574
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 142/464 (30%), Positives = 237/464 (51%), Gaps = 29/464 (6%)
Query: 172 SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHW 231
KLL FQ++G+ F L+ G LLADEMGLGKT+Q ++ + +PVL++ P +W
Sbjct: 112 GKLLNFQKEGLDFLLKSSGNALLADEMGLGKTVQTLSYVATEKQTFPVLVVAPLVTLNNW 171
Query: 232 AAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQN 291
I +++ ++ S+ S TI+ + + +P+ F II+Y+++ K +
Sbjct: 172 EREIAKFMKKKSRNGRIIESE-----SSTATIIRTGKSKELPVTD-FYIINYELLYKRLS 225
Query: 292 ILMSSNFKIVIADESHFL--KNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQL 349
L N + ++ DE H L K Q + L + Y + LSGTP +R E++ +
Sbjct: 226 DLSKLNIRTIVCDEVHNLRSKTTQKYKAVKKLAALPSISYRIGLSGTPIYNRGSEIWPIV 285
Query: 350 EALYPDVYKNVHEYGNRYC----KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
+ L P + + E+ +C KG + + L N ++ VM+RR K DVL +
Sbjct: 286 DILKPGLLGSFKEFCEYFCYVNEKGKAIVL---ENKRASLRNELQKHVMLRRKKSDVLKE 342
Query: 406 LPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK-FTEKNLINKIY 464
L K R + +D A+ D F EL + K++A + + E K + + I
Sbjct: 343 LKDKVRYKEVID-ADTDY-----YFDELGKIWTKLEAEQKDAESAFDKSASYQRAIQSER 396
Query: 465 TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKK--KVHCIRIDGGTPP 522
+ AK+P V+++++ ++E ++F HH+ IH+L +K + + I GG
Sbjct: 397 QIAGVAKLPHVINFVKNIMEIEESVVVFCHHK----VIHKLLHEKLGEFSPVSIIGGQSD 452
Query: 523 ASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
RQ + +FQ K + K + ++AG VG+ LT A VIFAEL W+P QAEDR HRI
Sbjct: 453 KMRQEAIDKFQ-KGESKLMIAGLRAGNVGINLTRAKYVIFAELDWSPAIHRQAEDRLHRI 511
Query: 583 GQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
GQ ++V YYL+ N T+DD V +++ K + ++D ++ E
Sbjct: 512 GQKNTVFAYYLIGNGTLDDHVANILVDKSYEIDSIMDETADTYE 555
>gi|407462264|ref|YP_006773581.1| SNF2-like protein [Candidatus Nitrosopumilus koreensis AR1]
gi|407045886|gb|AFS80639.1| SNF2-related protein [Candidatus Nitrosopumilus koreensis AR1]
Length = 574
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 239/473 (50%), Gaps = 47/473 (9%)
Query: 172 SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHW 231
KLL FQ++G+ F ++ G LLADEMGLGKT+Q ++ + +PVL++ P +W
Sbjct: 112 GKLLNFQKEGLDFLMKSSGNALLADEMGLGKTVQTLSYVATEKQTFPVLVVAPLVTLNNW 171
Query: 232 AAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQN 291
I+++L +V ++ T++ + ++ +P ++ +I+Y+++ K +
Sbjct: 172 EREIEKFLKKKSRNGRIVENE-----SPSVTLIRTGKRKELPKSDIY-VINYELLFKRYD 225
Query: 292 ILMSSNFKIVIADESHFL--KNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQL 349
L + K ++ DE H L K Q ++ L + Y + LSGTP +R E++ +
Sbjct: 226 DLANVGIKTIVCDEVHNLRSKTTQKYKSIKKLAALPSVSYRIGLSGTPIYNRGSEIWPIV 285
Query: 350 EALYPDVYKNVHEYGNRYC----KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
+ L P + N E+ +C KG + + L N ++ VM+RR K DVL +
Sbjct: 286 DILKPGLLGNFKEFCEYFCYVNEKGKAIVL---ENKRASLRNELQKHVMLRRKKSDVLKE 342
Query: 406 LPVK-RRQQVFLDVAEKDMRQIYALFRELEVVKGKI-----------KACKSEEEVQSLK 453
L K R ++V + + ++ ++++LE + +A +SE ++ L
Sbjct: 343 LKDKVRYKEVIAADTDYYLEELDKIWKKLEEEQKDADSEFSKSASYHRAIQSERQIAGL- 401
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHC 513
AK+P V+++++ ++E ++F HH+ + +H+ ++
Sbjct: 402 ----------------AKLPHVINFVKNIMEIEESVVVFCHHKVIHKLLHESL--QEFAP 443
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
+ I GG + RQ + +FQ K + K + ++AG VG+ LT A VIFAEL W+P
Sbjct: 444 VSIIGGQSDSVRQDQIDKFQ-KGESKLMIAGIRAGNVGINLTKAKYVIFAELDWSPAIHR 502
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
QAEDR HRIGQ ++V YYL+ N T+DD V DV+ K + +++D + E
Sbjct: 503 QAEDRLHRIGQKNTVFAYYLIGNGTLDDHVADVLVDKSYEIDEIMDESAENFE 555
>gi|393796694|ref|ZP_10380058.1| SNF2-related protein [Candidatus Nitrosoarchaeum limnia BG20]
Length = 570
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 142/464 (30%), Positives = 237/464 (51%), Gaps = 29/464 (6%)
Query: 172 SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHW 231
KLL FQ++G+ F L+ G LLADEMGLGKT+Q ++ + +PVL++ P +W
Sbjct: 108 GKLLNFQKEGLDFLLKSSGNALLADEMGLGKTVQTLSYVATEKQTFPVLVVAPLVTLNNW 167
Query: 232 AAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQN 291
I +++ ++ S+ S TI+ + + +P+ F II+Y+++ K +
Sbjct: 168 EREIAKFMKKKSRNGRIIESE-----SSTATIIRTGKSKELPVTD-FYIINYELLYKRLS 221
Query: 292 ILMSSNFKIVIADESHFL--KNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQL 349
L N + ++ DE H L K Q + L + Y + LSGTP +R E++ +
Sbjct: 222 DLSKLNIRTIVCDEVHNLRSKTTQKYKAVKKLAALPSISYRIGLSGTPIYNRGSEIWPIV 281
Query: 350 EALYPDVYKNVHEYGNRYC----KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
+ L P + + E+ +C KG + + L N ++ VM+RR K DVL +
Sbjct: 282 DILKPGLLGSFKEFCEYFCYVNEKGKAIVL---ENKRASLRNELQKHVMLRRKKSDVLKE 338
Query: 406 LPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK-FTEKNLINKIY 464
L K R + +D A+ D F EL + K++A + + E K + + I
Sbjct: 339 LKDKVRYKEVID-ADTDY-----YFDELGKIWTKLEAEQKDAESAFDKSASYQRAIQSER 392
Query: 465 TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKK--KVHCIRIDGGTPP 522
+ AK+P V+++++ ++E ++F HH+ IH+L +K + + I GG
Sbjct: 393 QIAGVAKLPHVINFVKNIMEIEESVVVFCHHK----VIHKLLHEKLGEFSPVSIIGGQSD 448
Query: 523 ASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
RQ + +FQ K + K + ++AG VG+ LT A VIFAEL W+P QAEDR HRI
Sbjct: 449 KMRQEAIDKFQ-KGESKLMIAGLRAGNVGINLTRAKYVIFAELDWSPAIHRQAEDRLHRI 507
Query: 583 GQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
GQ ++V YYL+ N T+DD V +++ K + ++D ++ E
Sbjct: 508 GQKNTVFAYYLIGNGTLDDHVANILVDKSYEIDSIMDETADTYE 551
>gi|298385406|ref|ZP_06994964.1| zinc finger Ran-binding domain-containing protein 3 [Bacteroides
sp. 1_1_14]
gi|298261547|gb|EFI04413.1| zinc finger Ran-binding domain-containing protein 3 [Bacteroides
sp. 1_1_14]
Length = 502
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 238/469 (50%), Gaps = 31/469 (6%)
Query: 169 HIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLR 228
H+ + +QR+G+ + L+H R+++ DE GLGKT+Q+I + + +P L++ PSSL+
Sbjct: 31 HLRVEPYDYQREGIVYGLEHR-RLIIGDEPGLGKTLQSIGIVDT-ANAYPCLVICPSSLK 88
Query: 229 LHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK 288
++W +++ + + VVL + + + + + + L +D+ K
Sbjct: 89 INWQREFEKFTD----KSAVVLDNAVRTTWNYLLSMGVHQVAVVNYESLRKYFVWDIKAK 144
Query: 289 -----LQNILMSSN---FKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
L++++ FK +I DESH +K+ A++T T + ++ +LLSGTP ++
Sbjct: 145 SKQFRLKDVVFCPQIQMFKSIIIDESHRVKDPSAQQTIFTKGLSVGKEWIILLSGTPVVN 204
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNR------YCKGGVFGIYQGASNHEELHNLMKATVM 394
RP +L QL + ++++G R YC + A EL + T M
Sbjct: 205 RPEDLIAQLS-----IMNRLNDFGGRGKFIADYCTDPKDKDAEPAVPLSELSRQLYDTCM 259
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKF 454
IRR K VL QLP K R +++D++ + A +L + C E + ++
Sbjct: 260 IRREKAKVLPQLPDKTRVDLYVDISNSAEYNLAA--SDLATYLQEYTECTDWEIRRKMRM 317
Query: 455 TEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
+ + + + KI +D+++T +++G K ++F ++D + ++F K +
Sbjct: 318 EALVKFMTLRSLATKGKIAQAVDFIKTFLDSGKKLIVFCSLHEIVDELQKVFPKA----V 373
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
+ G ++QA V FQ +V+ + S+KA GVGLTLTA+S V F EL+WT D Q
Sbjct: 374 TVTGRDSAINKQASVDAFQNNPNVQLIICSIKAAGVGLTLTASSNVAFIELAWTYADCCQ 433
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
EDRAHRIGQ +V YYLL T+D ++ ++ K ++++ ++
Sbjct: 434 CEDRAHRIGQKDNVTCYYLLGRGTIDHTIYSLIHRKKSIASEIMNSDDD 482
>gi|336413240|ref|ZP_08593592.1| hypothetical protein HMPREF1017_00700 [Bacteroides ovatus
3_8_47FAA]
gi|335938284|gb|EGN00174.1| hypothetical protein HMPREF1017_00700 [Bacteroides ovatus
3_8_47FAA]
Length = 555
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 156/555 (28%), Positives = 260/555 (46%), Gaps = 39/555 (7%)
Query: 85 NIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHP 144
N F Y P +V R+IP ++ +++W P E+++ +I + EN++
Sbjct: 9 NFELSFKYKPSIVDRVRQIPGRRFDGAKKVWIVPARSRVDLERMIYQIRQF----ENINW 64
Query: 145 LVQRAIASASAAPDLREKYD-QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKT 203
+ A D+ E D +P +++ + P+Q G+ LQ R + DE GLGKT
Sbjct: 65 VNGTEKKEEDIAYDIPELPDLTVPHNLKIQPYPYQLKGIARGLQLK-RFMNCDEPGLGKT 123
Query: 204 IQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTI 263
+Q+IA D +P L++ PSSL+++W +++W + +++ ++ R +T
Sbjct: 124 LQSIATIN-LADAFPCLVVCPSSLKINW---LREWEKFTDKKAMILTDKV----RDTWTF 175
Query: 264 VSSNTKRNIPLDGLFNIISYDV---------VLKLQNILMSSN-FKIVIADESHFLKNAQ 313
+ + ++ Y V L+ S N FK VI DESH K+A
Sbjct: 176 FFQTGMHQVFIVNYESLKKYFVQRIKKAEGWTLRDVEFRNSINLFKSVIIDESHRCKSAS 235
Query: 314 AKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEAL-YPDVYKNVHEYGNRYCKGGV 372
++ I ++ + L+GTP ++RP +L QL L + + + +RYC G
Sbjct: 236 TQQAKFCKGICTGKEWVIELTGTPVVNRPKDLIPQLAILDRMNDFGGYKPFVDRYCSGQ- 294
Query: 373 FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFR 431
+ ASN EL+ + M RR K VL LP K RQ ++ E R+ Y R
Sbjct: 295 ----REASNLRELNFNLWKYCMFRREKSLVLTDLPDKIRQ---VNTCEITNRKEYMDAER 347
Query: 432 ELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLI 491
+L + K K ++ ++++ IN + SA K+ V+++++ E G K ++
Sbjct: 348 DLIMYLQKYKDADDDKIAKAMRGEVMVRINILRQISARGKVRDVIEFVKDFRENGKKIIL 407
Query: 492 FAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVG 551
F ++D + + F + + G +Q V FQ + S+KA GVG
Sbjct: 408 FCSLHEVVDQLKRYF----PTAVSVTGRDSQDEKQRAVDAFQNNPKADIIICSIKAAGVG 463
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
LTLTA+S V F E WT D Q EDRAHRIGQ SV YY L T+D+ V+ +++ K
Sbjct: 464 LTLTASSNVAFVEFPWTYADCCQCEDRAHRIGQKDSVTCYYFLGRRTIDEKVYRIIQEK- 522
Query: 612 ENLGQVLDGHENSLE 626
+N+ + G +E
Sbjct: 523 KNIANAVTGSTEDIE 537
>gi|281210112|gb|EFA84280.1| hypothetical protein PPL_03357 [Polysphondylium pallidum PN500]
Length = 1494
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 144/230 (62%), Gaps = 22/230 (9%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
IP+ + LLPFQ G+ F +QH G+ ++ADEMGLGKTIQA+A+A+ + WP+LI+ PS
Sbjct: 663 IPSKLLEALLPFQTKGLLFGIQHHGKCMIADEMGLGKTIQALAIASFYIQEWPILIICPS 722
Query: 226 SLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDV 285
SLR W+ IQ+W I ++ + G +N L NI+SYD+
Sbjct: 723 SLRYTWSREIQKWFPEYTGRISLITTGDGKAN------------------SLINIVSYDL 764
Query: 286 VLKLQNI-LMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
V KL N LM NF+++I DESH+LKN AKRT+A L +IK A +LL+GTPALSRPIE
Sbjct: 765 VTKLYNTELMPRNFRVIICDESHYLKNINAKRTSAVLKLIKSAVRRILLTGTPALSRPIE 824
Query: 345 LFKQLEALYPDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKA 391
L+ QL AL +Y ++E+G RYC G +G Y G S+ ELH L+++
Sbjct: 825 LYPQLVALETPIYSKMNEFGLRYCAAFKGRYGWDYTGNSHLPELHVLLES 874
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 111/181 (61%), Gaps = 4/181 (2%)
Query: 466 DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASR 525
+S AK+P DY+ +++ KFL+FAHH +LD + + +RIDG TP +R
Sbjct: 873 ESGRAKLPGAQDYIVGLVKENKKFLVFAHHTDILDGLERSIKSTGTGYMRIDGSTPAEAR 932
Query: 526 QALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQV 585
Q VT FQ D + A+LS+ A G GLTLTA+S V+F EL WTPG L QAEDR HRIGQ
Sbjct: 933 QTYVTRFQNSDKCRVALLSITAAGTGLTLTASSLVVFVELYWTPGVLRQAEDRVHRIGQR 992
Query: 586 SSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSF 645
V+++YL+ +T+DD +W + +KLE LG+ LDG E L +RS+ LD F
Sbjct: 993 EDVHIHYLIGKNTLDDKMWPTICNKLEVLGETLDGQEEILHTEIHDLRSN----TKLDQF 1048
Query: 646 L 646
+
Sbjct: 1049 I 1049
>gi|407464616|ref|YP_006775498.1| SNF2-like protein [Candidatus Nitrosopumilus sp. AR2]
gi|407047804|gb|AFS82556.1| SNF2-related protein [Candidatus Nitrosopumilus sp. AR2]
Length = 574
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 241/475 (50%), Gaps = 25/475 (5%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWP 218
L+ K + KLL FQ++G+ F L+ G LLADEMGLGKT+Q ++ A + +P
Sbjct: 99 LKLKRAKTGEQFRGKLLNFQKEGLDFLLKSSGNALLADEMGLGKTVQTLSYAATEKQTFP 158
Query: 219 VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
+L++ P +W I+++L ++ S+ TI+ + + +P ++
Sbjct: 159 LLVVAPLVTLNNWEREIEKFLKKKSRNGRIIESE-----SPSVTIIRTGKSQELPKTDIY 213
Query: 279 NIISYDVVLKLQNILMSSNFKIVIADESHFL--KNAQAKRTAATLPIIKKAQYALLLSGT 336
II+Y+++ K + L + ++ DE H L K Q + L + Y + LSGT
Sbjct: 214 -IINYELLFKRNDDLSKLGLRTIVCDEVHNLRSKTTQKYKAVKKLAALPSILYRIGLSGT 272
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYC----KGGVFGIYQGASNHEELHNLMKAT 392
P +R E++ ++ + P + + E+ +C KG + + L N ++
Sbjct: 273 PIYNRGSEIWPIIDIIKPGLLGSFKEFCEYFCYVNEKGKAIVL---ENKRASLRNELQKH 329
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQ-S 451
VM+RR K DVL +L K R + + A+ D EL+ + K++A + + E + S
Sbjct: 330 VMLRRKKADVLKELKDKVRYKEVI-AADTDY-----YLEELDKIWKKVEAEQKDAETEFS 383
Query: 452 LKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKV 511
+ I + AK+P V+++++ ++E ++F HH+ + +H ++
Sbjct: 384 KSASYHRAIQSERQIAGIAKLPHVINFVKNIMEIEESVVVFCHHKVIHKLLHDSL--QEF 441
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
+ I GG A+RQ + +FQ + + K + ++AG VG+ LT A VIFAEL W+P
Sbjct: 442 SPVSIIGGQSDATRQDQIDKFQ-RGESKLMIAGIRAGNVGINLTRAKYVIFAELDWSPAI 500
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
QAEDR HRIGQ ++V YYL+ N T+DD V +V+ K + +++D + + E
Sbjct: 501 HRQAEDRLHRIGQKNTVFAYYLIGNGTLDDHVANVLVDKSYEIDEIMDESKENYE 555
>gi|383111868|ref|ZP_09932672.1| hypothetical protein BSGG_4581 [Bacteroides sp. D2]
gi|313697046|gb|EFS33881.1| hypothetical protein BSGG_4581 [Bacteroides sp. D2]
Length = 557
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 162/562 (28%), Positives = 263/562 (46%), Gaps = 53/562 (9%)
Query: 85 NIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHP 144
N F Y P +V R+IP ++ ++W P E+++ +I + EN++
Sbjct: 9 NFELSFKYKPSIVDRIRQIPGRRFDGTRKVWIIPTRSRVDLERMIYQIQQF----ENINW 64
Query: 145 LVQRAIASASAAPDLREKYD-QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKT 203
L A D+ E + IP +++ + P+Q G+ L+ R + DE GLGKT
Sbjct: 65 LSGNEKREEEAVYDIPELPELVIPHNLKIQPYPYQLKGIARGLELK-RFMNCDEPGLGKT 123
Query: 204 IQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTI 263
+Q+IA +P L++ PSSL+++W +++W + +++ ++ R +T
Sbjct: 124 LQSIATIN-IAGAFPCLVICPSSLKINW---MREWEKFTDKKAMILTDKV----RDTWTF 175
Query: 264 VSSNTKRNIPLDGLFNIISYDVVLK--LQNILMSSN--------------FKIVIADESH 307
+ I++Y+ + K +Q I S FK VI DESH
Sbjct: 176 FFQTGMHQV------FIVNYESLKKYFVQRIKKSEGWTLRDVEFRNSINLFKSVIIDESH 229
Query: 308 FLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYP-DVYKNVHEYGNR 366
K+A ++ I ++ + L+GTP ++RP +L QL L + + + NR
Sbjct: 230 RCKSASTQQAKFCKGICTGKEWIIELTGTPVVNRPKDLIPQLAILNRMEDFGGYKPFVNR 289
Query: 367 YCKGGVFGIYQGASNHEELH-NLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQ 425
YC G + ASN +EL+ NL K V RR K VL LP K RQ ++ E R+
Sbjct: 290 YCSGQ-----REASNLKELNFNLWKYCVF-RREKSLVLTDLPDKIRQ---VNTCEITNRK 340
Query: 426 IYA-LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIE 484
Y R+L + K K E+ ++L+ IN + SA K+ V+++++ E
Sbjct: 341 EYVDAERDLIMYLQKYKDADDEKIEKALRGEVMVRINILRQISARGKVRDVIEFVKDFRE 400
Query: 485 AGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLS 544
G K ++F ++D + + F + + G +Q V FQ + S
Sbjct: 401 NGKKIILFCSLHEVVDQLKRYF----PTAVSVTGRDSQDVKQRAVDAFQNNPKTDIIICS 456
Query: 545 MKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVW 604
+KA GVGLTLTA+S V F E WT D Q EDRAHRIGQ SV YY L T+D+ V+
Sbjct: 457 IKAAGVGLTLTASSNVAFVEFPWTYADCCQCEDRAHRIGQKDSVTCYYFLGRRTIDEKVY 516
Query: 605 DVVRSKLENLGQVLDGHENSLE 626
+++ K +N+ + G +E
Sbjct: 517 RIIQEK-KNIANAVTGSTEDIE 537
>gi|268572145|ref|XP_002641246.1| Hypothetical protein CBG09114 [Caenorhabditis briggsae]
Length = 467
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 206/404 (50%), Gaps = 34/404 (8%)
Query: 50 TLPLSVAPAPKGSLGDFSKEQVPKLSVKFFLHTSGNIAAKF-TYDPVLVSAFRKIPKATW 108
T PL+ AP P ++ P + VK L + +F + +V +++P +
Sbjct: 76 TQPLNPAP-PTSNIK-------PTIVVKLKLDVEDRVKIEFYPFHSAIVDLIKQVPSRNY 127
Query: 109 NAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPA 168
+ ++LWT + S+ +L VEIE + + + S P + +
Sbjct: 128 DPNKKLWTVSLSEHSTMSNLLKNAQSVKVEIEPIPMNILGMMTSFKPKPTPSDLTKIMDP 187
Query: 169 HIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLR 228
+ +L P+Q++GV FAL+ GRILLADEMGLGK++QA+ +A ++ WP+LI+ P+S++
Sbjct: 188 ELIKRLFPYQKEGVTFALERNGRILLADEMGLGKSVQALTIARYYKADWPLLIVCPASVK 247
Query: 229 LHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK 288
W I + I +R SS+ ++ I+SY+ ++
Sbjct: 248 GAWKKQINTFFPI--------------IHRIFIVDKSSDPLPDVRTSNTVAIMSYEQMVL 293
Query: 289 LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQ 348
++L + +I DESH LK+ +A+RT + K A +A+LLSGTPALSRP ELF Q
Sbjct: 294 KADLLKREKYSTIIFDESHMLKDGKARRTKVATDLAKIALHAILLSGTPALSRPSELFTQ 353
Query: 349 LEALYPDVYKNVHEYGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
+ + ++ N HE+ RYC G G F +G +N EEL +M MIRRLK DVL
Sbjct: 354 IRLIDHKLFTNFHEFAIRYCDGKQGRFCFEAKGCTNSEELAAIMFRRFMIRRLKADVLKD 413
Query: 406 LPVKRRQQVF-----LDVAEKDMRQIYALFRELEVV---KGKIK 441
LP KRR+ V+ +D D+++ A + ++ + GKIK
Sbjct: 414 LPEKRREVVYVSGPTIDARMDDLQKAKADYEKINSMTKTTGKIK 457
>gi|198276225|ref|ZP_03208756.1| hypothetical protein BACPLE_02416 [Bacteroides plebeius DSM 17135]
gi|198271037|gb|EDY95307.1| helicase C-terminal domain protein [Bacteroides plebeius DSM 17135]
Length = 558
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 159/556 (28%), Positives = 256/556 (46%), Gaps = 60/556 (10%)
Query: 80 LHTSGNI-AAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVE 138
+ GN+ F Y P +V R+I ++ + W PV EK++ +I +
Sbjct: 3 IELKGNVFEVTFKYKPTIVDRIRQITGKRYDGSRKKWLIPVSSRVELEKMVYQIRPF--- 59
Query: 139 IENLHPLV----QRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILL 194
EN+ + Q A P+L E IP ++ P+Q G+ LQ R +
Sbjct: 60 -ENIQWVTGQQKQEEEEVAYNIPELPEL--DIPHLLKVNPYPYQLKGIARGLQLK-RFMN 115
Query: 195 ADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLG 254
DE GLGKT+Q+IA + +P L++ PS+L+++W ++W + +V+ ++
Sbjct: 116 CDEPGLGKTLQSIATIN-LGNAFPCLVICPSALKVNWE---REWHKFTDKKAMVLTDKV- 170
Query: 255 GSNRSGFTIVSSNTKRNIPLDGLFN--IISYDVVLK--LQNILMSSN------------- 297
R +T G++ I++Y+ + K +Q I S
Sbjct: 171 ---RDTWTFFYQT--------GMYQVFIVNYESLKKYFVQRIKKESGWTLRDVEFRNSIQ 219
Query: 298 -FKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYP-D 355
FK VI DESH K++ ++ I ++ + L+GTP +++P +L QL L +
Sbjct: 220 LFKSVIIDESHRCKSSSTQQAKFCKGICNGKEWVIELTGTPVVNKPKDLIPQLSILSRME 279
Query: 356 VYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVF 415
+ + NRYC G ASN +EL+ ++ M RR K VL LP K RQ
Sbjct: 280 DFGGYKTFVNRYCSGQ-----NEASNLKELNYMLWTKCMFRREKSLVLTDLPDKIRQ--- 331
Query: 416 LDVAEKDMRQIYA-LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPA 474
++ E R+ Y R+L + K K E+ ++L+ IN + SA K+
Sbjct: 332 VNTCEITNRKEYIDAERDLIMYLQKYKEADDEKIEKALRGEVMVRINILRQISARGKVRD 391
Query: 475 VLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE 534
V+++++ E G K ++F ++D + F + + G +Q V FQ
Sbjct: 392 VIEFVKDFRENGKKIILFCSLHEVVDQLKSYF----PTAVSVTGRDSQDEKQRAVDSFQN 447
Query: 535 KDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLL 594
+ S+KA GVGLTLTA+S V F E WT D Q EDRAHRIGQ SV YY L
Sbjct: 448 NPKTDIIICSIKAAGVGLTLTASSNVAFVEFPWTYADCCQCEDRAHRIGQKDSVTCYYFL 507
Query: 595 ANDTVDDIVWDVVRSK 610
T+D+ V+ ++++K
Sbjct: 508 GRRTIDEKVYRIIQNK 523
>gi|193084005|gb|ACF09679.1| helicase SNF2/RAD54 family [uncultured marine crenarchaeote
AD1000-202-A2]
Length = 569
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 142/464 (30%), Positives = 236/464 (50%), Gaps = 29/464 (6%)
Query: 172 SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHW 231
KLL FQ++G+ F L+ G+ LLADEMGLGKT+Q +A + P L++ P +W
Sbjct: 107 GKLLNFQKEGLDFLLKSTGKALLADEMGLGKTVQTLAYIASEKQSLPALVIAPLVTLNNW 166
Query: 232 AAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQN 291
I +++ ++ + + S T++ + I D F II+Y+++ K N
Sbjct: 167 QREIGKFMKKKSGNGRIIENGIPTS-----TMIRKGKEEPIG-DFDFYIINYELLHKRLN 220
Query: 292 ILMSSNFKIVIADESHFLKNAQAKRTAATLPI--IKKAQYALLLSGTPALSRPIELFKQL 349
L N + ++ DE L++ ++ AA I +K +Y + LSGTP +R E++ +
Sbjct: 221 DLSELNIRTLVCDEVQHLRSKTTQKYAAVKNIAAMKSVKYRVGLSGTPIYNRGSEIWPIV 280
Query: 350 EALYPDVYKNVHEYGNRYC----KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
+ L P + N E+ +C +G + S L +L+ VM+RR K DVL +
Sbjct: 281 DILKPGLLGNFKEFCEYFCYLDERGKAIVV---PSKRNGLRHLLTDHVMLRRKKSDVLKE 337
Query: 406 LPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTE-KNLINKIY 464
L K R +D A+K+ Q EL + K++ + E + LK + I
Sbjct: 338 LKEKVRYTEIID-ADKNYYQ-----DELNKIWSKLENEQKTAETEFLKHASYQRAIQSER 391
Query: 465 TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLK--KKVHCIRIDGGTPP 522
+ AK+P+V+++++ ++E ++F HH+ AIH+L + ++ H I GG
Sbjct: 392 QAAGVAKLPSVIEFVKNIMEIEESVVVFCHHK----AIHRLLHESLQEFHPSSIIGGQTD 447
Query: 523 ASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
RQ + FQ+ D K + ++AG +G+ LT A VIF EL W+P QAEDR HRI
Sbjct: 448 KVRQLNIDRFQD-GDTKLMIAGLRAGNLGINLTRAKYVIFGELDWSPAIHRQAEDRLHRI 506
Query: 583 GQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
GQ ++V YYL+ N T+D+ V +++ K + ++D S E
Sbjct: 507 GQKNTVFAYYLIGNGTLDEHVANILVDKSYEIDTIMDEVRESFE 550
>gi|193083817|gb|ACF09499.1| helicase SNF2/RAD54 family [uncultured marine crenarchaeote
SAT1000-23-F7]
Length = 571
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 142/465 (30%), Positives = 234/465 (50%), Gaps = 31/465 (6%)
Query: 172 SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHW 231
KLL FQ++G+ F L+ G LLADEMGLGKT+Q +A + P L++ P +W
Sbjct: 107 GKLLNFQKEGLDFLLKSTGNALLADEMGLGKTVQTLAYIASEKQSSPTLVIAPLVTLNNW 166
Query: 232 AAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL-DGLFNIISYDVVLKLQ 290
I +++ ++ + S T++ + PL D F II+Y+++ K
Sbjct: 167 QREIGKFMKKKSRNGRIIEDGIPTS-----TMIRKGKQE--PLGDFDFYIINYEMLRKRF 219
Query: 291 NILMSSNFKIVIADESHFLKNAQAKRTAATLPI--IKKAQYALLLSGTPALSRPIELFKQ 348
N L N + ++ DE L++ ++ AA I +K +Y + LSGTP +R E++
Sbjct: 220 NDLSKLNIRTLVCDEVQHLRSKTTQKYAAVKKIAAMKSVKYRVGLSGTPIYNRGSEIWPI 279
Query: 349 LEALYPDVYKNVHEYGNRYC----KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLA 404
++ L P + N E+ +C KG + S L +L+ +M+RR K DVL
Sbjct: 280 VDILKPGLLGNFKEFCEYFCYLDEKGKAIVV---PSKRNGLRHLLTDHIMLRRKKSDVLK 336
Query: 405 QLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTE-KNLINKI 463
+L K R +D A+ + Q EL + K++ + E + LK + I
Sbjct: 337 ELKAKVRYTEIID-ADANYYQ-----DELNKIWSKLENEQKTAETEFLKHASYQRAIQSE 390
Query: 464 YTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLK--KKVHCIRIDGGTP 521
+ AK+P+++++++ ++E ++F HH+ AIH+L + ++ H I GG
Sbjct: 391 RQAAGVAKLPSIIEFVKNIMEIEESVVVFCHHK----AIHRLLHESLQEFHPSSIIGGQT 446
Query: 522 PASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHR 581
RQA + FQ D K + ++AG +G+ LT A VIF EL W+P QAEDR HR
Sbjct: 447 DKDRQANIDRFQN-GDTKLMIAGLRAGNLGINLTRAKYVIFGELDWSPAIHRQAEDRLHR 505
Query: 582 IGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
IGQ ++V YYL+ N T+D+ V +++ K + ++D S E
Sbjct: 506 IGQKNTVFAYYLIGNGTLDEHVANILVDKSYEIDTIMDEVHESFE 550
>gi|326670855|ref|XP_003199305.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Danio rerio]
Length = 668
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 168/310 (54%), Gaps = 39/310 (12%)
Query: 81 HTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVP--------------FLSSAE 126
H+ + Y L+ F+ IP ++ ++W F + L
Sbjct: 159 HSENRFRVEVGYHADLILVFKSIPSKNYDPATKMWNFSLEDYQMLNMKTRKWTFLLEDYG 218
Query: 127 KVLSEISGY-NVEIENLHPLVQRAIASA-----SAAPDLRE-KYDQIPAHIESKLLPFQR 179
K++++++ VE E L V ++ +S S AP E I + L+PFQR
Sbjct: 219 KLMADLNELPTVETEPLPHAVLQSFSSQFEKTQSQAPVPPEADLSHIDPQLTRSLMPFQR 278
Query: 180 DGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL 239
DGV FA+ GR+LLAD+MGLGKT+QAI +A +R WP+L++ PSS+R WA ++WL
Sbjct: 279 DGVNFAVSREGRLLLADDMGLGKTVQAICIAAYYRSEWPLLVVAPSSVRFTWAEAFRRWL 338
Query: 240 -NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNF 298
++ P I VV + ++ R+ GL NIISYD++ K+ SS F
Sbjct: 339 PSVKPDSINVV-------------VKGKDSLRS----GLINIISYDLLNKMDKQPPSSPF 381
Query: 299 KIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYK 358
++I DESHFLKN + R A LP++K A+ +LLSGTPA+SRP EL+ Q++A+ P ++
Sbjct: 382 NVIIMDESHFLKNMKTARCRAALPLLKTAKRVILLSGTPAMSRPAELYTQIQAVRPALFP 441
Query: 359 NVHEYGNRYC 368
H++G RYC
Sbjct: 442 RFHDFGTRYC 451
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 150/263 (57%), Gaps = 17/263 (6%)
Query: 404 AQLPV-KRRQQVFLDVAEKDMRQIYALFRELEVVKGKI---------KACKSEEEVQSLK 453
A LP+ K ++V L M + L+ +++ V+ + + C ++++ Q
Sbjct: 402 AALPLLKTAKRVILLSGTPAMSRPAELYTQIQAVRPALFPRFHDFGTRYCDAKQKSQ--- 458
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVH 512
EK + + +AEAKI A+++Y+ ++E G KFL+FAHH+ +LD+I + +K +
Sbjct: 459 --EKEALLVFFNHTAEAKIRAIMEYISDMLECGREKFLVFAHHKLVLDSITKELGEKSIS 516
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG TP A RQ L FQ AVLS+ A +GLTL +A+ V+FAEL W PG L
Sbjct: 517 FIRIDGSTPSAERQLLCERFQASQQSCVAVLSITAANMGLTLHSAALVVFAELFWNPGVL 576
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN-SLEVSSSQ 631
IQAEDR HRIGQ S+V+++YL+A T DD +W ++++K+ L QV N S S+
Sbjct: 577 IQAEDRVHRIGQTSNVDIHYLVAKGTADDYLWPMIQAKMNVLEQVGLSESNISENAESAS 636
Query: 632 IRSSPAKQKTLDSFLKRCNNVDD 654
S +Q T+ +R + D+
Sbjct: 637 FHSRDRQQLTITEMFQRSFDEDE 659
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 453 KFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKV 511
K EK + + +AEAKI A+++Y+ ++E G KFL+FAHH+ +LD+I + L +K
Sbjct: 34 KSQEKEALLVFFNHTAEAKIRAIMEYISDMLECGREKFLVFAHHKLVLDSITKE-LGEKT 92
Query: 512 HCIRIDGGT----PPASRQALVT 530
I I+ PP S A T
Sbjct: 93 QLIDINAACTKTAPPTSITAAST 115
>gi|340344677|ref|ZP_08667809.1| SNF2-related protein [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519818|gb|EGP93541.1| SNF2-related protein [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 574
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 234/462 (50%), Gaps = 27/462 (5%)
Query: 173 KLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWA 232
KLL FQR+G+ F L+ G LLADEMGLGKT+Q ++ + +PVL++ P +W
Sbjct: 113 KLLNFQREGLDFLLKSSGNALLADEMGLGKTVQTLSYVATEKQTFPVLVVAPLVTLNNWE 172
Query: 233 AMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNI 292
I ++L ++ S+ S TI+ + + +P+ F II+Y+++ K +
Sbjct: 173 REISKFLKKKSRNGRIIESESPTS-----TIIRTGKSKELPVTD-FYIINYELLYKRLSD 226
Query: 293 LMSSNFKIVIADESHFL--KNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLE 350
L N + ++ DE H L K Q + L + Y + LSGTP +R E++ ++
Sbjct: 227 LSKLNIRTIVCDEVHNLRSKTTQKYKAVKKLAALPSISYRIGLSGTPIYNRGSEIWPIVD 286
Query: 351 ALYPDVYKNVHEYGNRYC----KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQL 406
L P + + E+ +C KG + + L N ++ VM+RR K DVL +L
Sbjct: 287 ILRPGLLGSFKEFCEYFCYVNEKGKAIVL---ENKRASLRNELQKHVMLRRKKSDVLKEL 343
Query: 407 PVKRRQQVFLDVAEKD--MRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIY 464
K R + +D A+ D + ++ ++ +LE + K E + + I
Sbjct: 344 KDKVRYKEVID-ADTDYYLDELGKIWNKLE------EEQKDAETAFDKSASYQRAIQSER 396
Query: 465 TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPAS 524
+ AK+P V+++++ ++E ++F HH+ + +H ++ + I GG +
Sbjct: 397 QIAGIAKVPHVINFVKNIMEIEESVVVFCHHKVIHKLLHTSL--EEFSPVTIIGGQSDKT 454
Query: 525 RQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQ 584
RQ + +FQ K + K + ++AG VG+ LT A VIFAEL W+P QAEDR HRIGQ
Sbjct: 455 RQEQIDKFQ-KGESKLMIAGIRAGNVGINLTRAKYVIFAELDWSPAIHRQAEDRLHRIGQ 513
Query: 585 VSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
++V YYL+ T+DD V +++ K + ++D ++ E
Sbjct: 514 KNTVFAYYLIGKGTLDDHVANILVDKSYEIDSIMDETADTYE 555
>gi|330841728|ref|XP_003292844.1| hypothetical protein DICPUDRAFT_58185 [Dictyostelium purpureum]
gi|325076886|gb|EGC30638.1| hypothetical protein DICPUDRAFT_58185 [Dictyostelium purpureum]
Length = 931
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 161/285 (56%), Gaps = 5/285 (1%)
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G + +ELH L++ +MIRRLK DVL LP K R +V +D + + +F +
Sbjct: 3 YTGNGHLQELHVLLRG-IMIRRLKVDVLHDLPPKHRIKVVVDTPTQMQSTLGNVFSKSNK 61
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHH 495
+ + ++++E L K I ++Y ++ +AK+ + +Y+ +I+ KFLIFAHH
Sbjct: 62 ISMFQQFKQNQDESNGLV---KGQIMELYRETGKAKLKSSCEYISKLIKEKEKFLIFAHH 118
Query: 496 QPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLT 555
++D + K K IRIDG TP RQ V +FQ + A+LS+ A G GLTLT
Sbjct: 119 SDIMDGLESAIQKSKAGYIRIDGSTPAVLRQTYVNKFQTNSSCQVALLSITAAGTGLTLT 178
Query: 556 AASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLG 615
A++ V+F EL WTPG L QAEDR HRIGQ V ++YL+ +T+DD +W ++ +KLE LG
Sbjct: 179 ASNLVVFVELYWTPGVLRQAEDRVHRIGQTKDVYIHYLIGKNTLDDRIWPIICNKLEVLG 238
Query: 616 QVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKRCNNVDDSEHQQK 660
+ LDG E L +RS T+D + + D E ++
Sbjct: 239 ETLDGQEEILRTRDIDVRSKIGGN-TIDRYFVGKDGAIDLEKEEN 282
>gi|154335774|ref|XP_001564123.1| SNF2/RAD54 related DNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061157|emb|CAM38179.1| SNF2/RAD54 related DNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 958
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 144/485 (29%), Positives = 234/485 (48%), Gaps = 54/485 (11%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D+IP + + Q +GVR AL+ GGRIL AD+MG+GKT+QA+A + +P+LI+
Sbjct: 173 DRIPHLLRRTMKAHQEEGVRTALRWGGRILFADDMGVGKTMQALATVAAL-EAYPLLIVC 231
Query: 224 PSSLRLHWAAMIQQWLN--IPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
PS+++L WA +I+Q+L+ + EI I +N +I + ++
Sbjct: 232 PSAVKLMWADLIEQYLHEQVSVDEI--------------HLIHGANDALSIDVQPKVVLV 277
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKN----AQAKRTAATLPIIKKAQYALLLSGTP 337
S+ + L+ L S +++ ++ DESH L+ A T + I K+ + LLLSGTP
Sbjct: 278 SFHMATVLEKQLRSRSWQCLLCDESHLLRTNISGVDAVYTRVVVAIGKRTPHCLLLSGTP 337
Query: 338 ALSRPIELFKQLEALYPDVY-KNVHEYGNRYCKGGVFGIYQ-GASNHE-ELHNLMKATVM 394
P +LF Q++ L P + K+ E+ RYC+ + Q G S EL +L+++ M
Sbjct: 338 VTDTPFDLFNQIDTLRPSLLGKSRFEFAMRYCRLTLSPYLQIGESTRRMELSSLLRSCCM 397
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKF 454
+RRLK+DVL +LP R+ +V + VA + + E +
Sbjct: 398 LRRLKEDVL-ELP--RKSRVVMRVAHRLLPH------------------SRERRSGDTSY 436
Query: 455 TEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
E+ Y +S + + + +E + ++ AHH ++DA+ Q + H +
Sbjct: 437 QER------YANSWKENWSGITEAVEHCCSKYDRVVLLAHHIGLIDALVQWTRDHRKHAV 490
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDG P R L+ F + + + A++ + A VG++L A +F EL + Q
Sbjct: 491 RIDGRVPVQQRGDLLDAFH-RGEARIAIIGITACAVGISLAPAQCAVFCELPPDAAWMRQ 549
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRS 634
AEDR HR GQ V VYYLL + D D+ NL + + SL +S S
Sbjct: 550 AEDRLHRPGQRDEVVVYYLLGLHSQFDA--DLFSRLCSNLSEAEESRGTSLLLSQMDHVS 607
Query: 635 SPAKQ 639
P +
Sbjct: 608 HPTRH 612
>gi|294933433|ref|XP_002780713.1| DNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239890749|gb|EER12508.1| DNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 318
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/269 (41%), Positives = 160/269 (59%), Gaps = 14/269 (5%)
Query: 378 GASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVK 437
GA N EEL+NL+ T+MIRRLKKDVL +LP K R +V LD+ + +++ A E++ +
Sbjct: 8 GAKNKEELYNLLTNTIMIRRLKKDVLKELPEKNRIKVPLDITDGKSQKVLA---EVQQAQ 64
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQP 497
++ E + +I+ + EAKI AV DYL+ +++ CK L+FAHH+
Sbjct: 65 KTMRELSRESLMNGDGRQRSQGFLEIWRKTGEAKIGAVKDYLDYLLDNDCKMLVFAHHRS 124
Query: 498 MLDAIHQ-----LFLK-----KKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKA 547
MLD + + L +K K IRIDG TP R LV +FQE DD++ AVLS+ A
Sbjct: 125 MLDKLEEKVEGILHIKGSSAGKNFGLIRIDGQTPQTKRPELVKKFQEDDDIRVAVLSITA 184
Query: 548 GGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQV-SSVNVYYLLANDTVDDIVWDV 606
GLTLTAAS V+FAEL W PG + QAE R HRIGQ S V+++YL+A + D+ V+
Sbjct: 185 CSEGLTLTAASVVVFAELYWVPGTIEQAEARVHRIGQTKSCVDIHYLIARGSPDEAVYAC 244
Query: 607 VRSKLENLGQVLDGHENSLEVSSSQIRSS 635
++ K E+ +L+G +L+ S I S
Sbjct: 245 LKRKKEDTSAILNGEVETLKAYDSPIGSG 273
>gi|319642264|ref|ZP_07996923.1| helicase domain-containing protein [Bacteroides sp. 3_1_40A]
gi|317386120|gb|EFV67040.1| helicase domain-containing protein [Bacteroides sp. 3_1_40A]
Length = 559
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 157/553 (28%), Positives = 254/553 (45%), Gaps = 53/553 (9%)
Query: 80 LHTSGNI-AAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NV 137
+ GN+ F Y P +V R+I ++ + W PV EK++ +I + N+
Sbjct: 3 IELKGNVFEVTFKYKPTIVDRIRQITGKRYDGSRKKWLIPVSSRVELEKMVYQIRPFENI 62
Query: 138 EIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADE 197
+ + A P+L E IP ++ P+Q G+ LQ R + DE
Sbjct: 63 QWVTGQQKQEEEEEVAYNIPELPEL--DIPHLLKVTPYPYQLKGIARGLQLK-RFMNCDE 119
Query: 198 MGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN 257
GLGKT+Q+IA + +P L++ PS+L+++W ++W + +V+ ++
Sbjct: 120 PGLGKTLQSIATIN-LGNAFPCLVICPSALKVNWE---REWHKFTDKKAMVLTDKV---- 171
Query: 258 RSGFTIVSSNTKRNIPLDGLFN--IISYDVVLK--LQNILMSSN--------------FK 299
R +T G++ I++Y+ + K +Q I S FK
Sbjct: 172 RDTWTFFYQT--------GMYQVFIVNYESLKKYFVQRIKKESGWTLRDVEFRNSIQLFK 223
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYP-DVYK 358
VI DESH K++ ++ I ++ + L+GTP +++P +L QL L + +
Sbjct: 224 SVIIDESHRCKSSSTQQAKFCKGICNGKEWVIELTGTPVVNKPKDLIPQLSILSRMEDFG 283
Query: 359 NVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDV 418
+ NRYC G ASN +EL+ ++ M RR K VL LP K RQ ++
Sbjct: 284 GYKTFVNRYCSGQ-----NEASNLKELNYMLWTKCMFRREKSLVLTDLPDKIRQ---VNT 335
Query: 419 AEKDMRQIYA-LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLD 477
E R+ Y R+L + K K E+ ++L+ IN + SA K+ V++
Sbjct: 336 CEITNRKEYIDAERDLIMYLQKYKEADDEKIEKALRGEVMVRINILRQISARGKVRDVIE 395
Query: 478 YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD 537
+++ E G K ++F ++D + F + + G +Q V FQ
Sbjct: 396 FVKDFRENGKKIILFCSLHEVVDQLKSYF----PTAVSVTGRDSQDEKQRAVDSFQNNPK 451
Query: 538 VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAND 597
+ S+KA GVGLTLTA+S V F E WT D Q EDRAHRIGQ SV YY L
Sbjct: 452 TDIIICSIKAAGVGLTLTASSNVAFVEFPWTYADCCQCEDRAHRIGQKDSVTCYYFLGRR 511
Query: 598 TVDDIVWDVVRSK 610
T+D+ V ++++K
Sbjct: 512 TIDEKVCRIIQNK 524
>gi|386876202|ref|ZP_10118331.1| SNF2 family N-terminal domain protein [Candidatus Nitrosopumilus
salaria BD31]
gi|386805983|gb|EIJ65473.1| SNF2 family N-terminal domain protein [Candidatus Nitrosopumilus
salaria BD31]
Length = 570
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 236/461 (51%), Gaps = 37/461 (8%)
Query: 172 SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHW 231
KLL FQ++G+ F L+ G LLADEMGLGKT+Q ++ + + +PVL++ P +W
Sbjct: 108 GKLLNFQKEGLDFLLKSSGNALLADEMGLGKTVQTLSYVSTEKQTFPVLVIAPLVTLNNW 167
Query: 232 AAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQN 291
I+++L ++ ++ TI+ + + +P ++ II+Y+++ K N
Sbjct: 168 EREIEKFLKKKSRNGRIIETE-----SPSVTIIRTGKSQELPKTDIY-IINYELLFKRYN 221
Query: 292 ILMSSNFKIVIADESHFL--KNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQL 349
L K ++ DE H L K Q ++ L + Y + LSGTP +R E++ +
Sbjct: 222 DLAKLGIKTIVCDEVHNLRSKTTQKYKSVKKLAALSSISYRIGLSGTPIYNRGSEIWPII 281
Query: 350 EALYPDVYKNVHEYGNRYC----KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
+ L P + + E+ +C KG + + L N ++ VM+RR K DVL +
Sbjct: 282 DILKPGLLGSFKEFCEYFCYVNEKGKAIVL---ENKRASLRNELQKHVMLRRKKSDVLKE 338
Query: 406 LPVK-RRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIY 464
L K R ++V + + ++ ++++LE E++ +F++ N+
Sbjct: 339 LKDKVRYKEVIAADTDFYIEELNKIWKKLE----------EEQKGADTEFSKSASYNRAI 388
Query: 465 TDSAE----AKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLK--KKVHCIRIDG 518
+ AK+P V+++++ ++E ++F HH+ IH+L + ++ + I G
Sbjct: 389 QSERQIAGLAKLPHVINFVKNIMEIEESVVVFCHHK----IIHKLLNESLQEFSPVTIIG 444
Query: 519 GTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDR 578
G RQ + +FQ K + K + ++AG VG+ LT A VIFAEL W+P QAEDR
Sbjct: 445 GQSDTLRQDQIDKFQ-KGESKLMIAGIRAGNVGINLTRAKYVIFAELDWSPAIHRQAEDR 503
Query: 579 AHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
HRIGQ ++V YYL+ + T+DD V +++ K + ++D
Sbjct: 504 LHRIGQKNTVFAYYLIGSGTLDDHVANILVDKSYEIDAIMD 544
>gi|161528234|ref|YP_001582060.1| SNF2-related protein [Nitrosopumilus maritimus SCM1]
gi|160339535|gb|ABX12622.1| SNF2-related protein [Nitrosopumilus maritimus SCM1]
Length = 574
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 236/473 (49%), Gaps = 47/473 (9%)
Query: 172 SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHW 231
KLL FQ++G+ F ++ G LLADEMGLGKT+Q ++ + +PVL++ P +W
Sbjct: 112 GKLLNFQKEGLDFLMKSSGNALLADEMGLGKTVQTLSYVATEKQTFPVLVVAPLVTLNNW 171
Query: 232 AAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQN 291
I+++L +L S T++ + K+ +P ++ +I+Y+++ K +
Sbjct: 172 EREIEKFLKKKSRN-----GRLLESESPTVTLIRTGKKKKLPKTDIY-VINYELLFKRYD 225
Query: 292 ILMSSNFKIVIADESHFL--KNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQL 349
L K V+ DE H L K Q ++ L + Y + LSGTP +R E++ +
Sbjct: 226 DLAKVGIKTVVCDEVHNLRSKTTQKYKSIKKLAALPSVSYRIGLSGTPIYNRGSEIWPII 285
Query: 350 EALYPDVYKNVHEYGNRYC----KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
+ L P + + E+ +C KG + + L N ++ VM+RR K DVL +
Sbjct: 286 DILKPGLLGSFKEFCEYFCYVNEKGKAIVL---ENKRASLRNELQKHVMLRRKKSDVLKE 342
Query: 406 LPVK-RRQQVFLDVAEKDMRQIYALFRELEVVKGKI-----------KACKSEEEVQSLK 453
L K R ++V + + ++ +++ LE + + +A +SE ++ L
Sbjct: 343 LKDKVRYKEVIAADTDYYVEELDKIWKRLEEEQKEAESEFSKSASYHRAIQSERQIAGL- 401
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHC 513
AK+P V+++++ ++E ++F HH+ + +H+ ++
Sbjct: 402 ----------------AKLPHVINFVKNIMEIEESVVVFCHHKVIHKLLHESL--QEFSP 443
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
+ I GG RQ + +FQ K + K + ++AG VG+ LT A VIFAEL W+P
Sbjct: 444 VSIIGGQSDTLRQDQIDKFQ-KGESKLMIAGIRAGNVGINLTRAKYVIFAELDWSPAIHR 502
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
QAEDR HRIGQ ++V YYL+ N T+DD V +V+ K + +++D + E
Sbjct: 503 QAEDRLHRIGQQNTVFAYYLIGNGTLDDHVANVLVDKSYEIDEIMDESVETFE 555
>gi|329954230|ref|ZP_08295324.1| helicase protein [Bacteroides clarus YIT 12056]
gi|328527936|gb|EGF54922.1| helicase protein [Bacteroides clarus YIT 12056]
Length = 562
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 150/550 (27%), Positives = 262/550 (47%), Gaps = 62/550 (11%)
Query: 89 KFTYDPVLVSAFRKIPKATWNAK------ERLWTFPVPFLSSAEKVLSEISGYNVEIENL 142
KF Y P+L+ + IP NAK E+ W + + E ++ ++ + V+
Sbjct: 17 KFMYHPMLIKCVKNIPSVKANAKKAYLFNEKAWWVDL----ADEWYVNTMANWAVQYGYC 72
Query: 143 HPLVQRAIASASAAPDLREKYD-QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLG 201
+ + A D+ +P + + +Q++G+ +AL H R + D+ GLG
Sbjct: 73 GSVQRSEQRKADITFDIAPMPQLTVPHGLLLEPYDYQKEGIAYALSHK-RCIFGDQPGLG 131
Query: 202 KTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
KT+QAI T + +P L++ P++L+++W +++ + ++L + F
Sbjct: 132 KTLQAIGTVTIAKS-YPCLVICPAALKINWQREFKKF----AGKQALILDDKNKNTWQRF 186
Query: 262 T------IVSSNT---KRNIPLDGLFNIISYDVVLKLQNILMSSN---FKIVIADESHFL 309
I +N K+ LD + DV +++I FK VI DESH
Sbjct: 187 IETKCCDIFITNYESLKKFFVLD-----VKDDVRFTMKSISFDPRITLFKSVIIDESHKC 241
Query: 310 KNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYP-DVYKNVHEYGNRYC 368
K+ + +++ I K ++ L L+GTP ++ +L +QL+ + + + + R+C
Sbjct: 242 KSTKTQQSKFVEGICKGKEFILELTGTPVVNDNTDLIQQLKIMGRLEDFGGYKTFTERFC 301
Query: 369 KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDV--------AE 420
G + ASN +EL+ + T RR K VL QLP K RQ + +D+ AE
Sbjct: 302 NGP-----KKASNLKELNWRLWNTCFFRREKAKVLTQLPDKTRQYIEMDITTRLEYEKAE 356
Query: 421 KDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLE 480
D+ Q +F+ + E+ +S++ + + SA KI A +++
Sbjct: 357 SDLIQYLRVFKNAD----------DEKIAKSMRGEVMVRMGILKAISARGKIKAAAEFIH 406
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
VI+ G K ++FA+ + ++ + ++F + + G +Q V FQ D
Sbjct: 407 DVIDGGEKLIVFAYLKEVVMELKKMF----PQAVTVTGEDNAIRKQMSVDAFQNNPDCTL 462
Query: 541 AVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+L+ K+GG GLTLTA+S V F E WT D QAEDRAHR GQ ++VN YY L +T+D
Sbjct: 463 IILNYKSGGTGLTLTASSRVAFIEFPWTFSDCEQAEDRAHRNGQKNNVNCYYFLGKNTID 522
Query: 601 DIVWDVVRSK 610
+ ++DV++ K
Sbjct: 523 EYMYDVIQRK 532
>gi|307106882|gb|EFN55126.1| hypothetical protein CHLNCDRAFT_57917 [Chlorella variabilis]
Length = 914
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 175/308 (56%), Gaps = 53/308 (17%)
Query: 158 DLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW 217
++R Y ++PA +E+ LLPFQR+GV F L GR L+ADEMG+GKT+QAIA+A+CF++ W
Sbjct: 339 EVRALYARMPAFLEAALLPFQREGVLFGLARAGRCLIADEMGVGKTVQAIALASCFQEEW 398
Query: 218 PVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGF---TIVSSNTKRNIP 273
P+L++ P+SLRL WA +++WL ++ P+ I +V + R TI S + +
Sbjct: 399 PLLVIVPASLRLVWAEELEKWLPHLRPACIHLVEGKEDRVARGALPLVTITSYEMMQRLT 458
Query: 274 LDGLFNIISYDVVLK---------LQNILMSSNFKIVIADESHFLKNAQ----AKRTAAT 320
D N + ++ LQN + S +K+VI DESH L+ + A T AT
Sbjct: 459 CDACKNRVVQGAGMRAGRRPSCRDLQNCMASQRWKVVIVDESHTLRTSNKPPDALHTEAT 518
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDV-----------YKNVHEY------ 363
+ +K A+ A+LL+GTP+LSRP +LF+Q++A+ P + Y N E
Sbjct: 519 VTAVKLARRAILLTGTPSLSRPFDLFRQVDAVAPGLLGANRICFASAYCNRREVALTVHN 578
Query: 364 GNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQ---------------LPV 408
G R + V G+ +G ELH+++KA VM+RRLK+DVL+Q LP
Sbjct: 579 GERTTRWDVGGLSRGG----ELHDMLKAEVMLRRLKQDVLSQASGMGALGRAAKSHALPP 634
Query: 409 KRRQQVFL 416
KRRQ + L
Sbjct: 635 KRRQVIRL 642
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 74/131 (56%), Gaps = 4/131 (3%)
Query: 485 AGCKFLIFAHHQPMLDAIHQLFLKKK----VHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
G KFL+FAHH+ +++ + K V+ +RIDGGT R+ V F V+
Sbjct: 756 GGPKFLVFAHHKTVMNRLAAALEGAKQYAPVNYVRIDGGTDQEDRRQAVRRFHSDSAVRV 815
Query: 541 AVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
A+LS+ A GVGL +AAS V+FAEL + QAEDRAHR GQ VNVY+L A T D
Sbjct: 816 ALLSVTAAGVGLDFSAASVVVFAELPDEVAHVRQAEDRAHRQGQRHPVNVYFLCAKGTAD 875
Query: 601 DIVWDVVRSKL 611
D W + L
Sbjct: 876 DRRWQALNRSL 886
>gi|387595915|gb|EIJ93538.1| hypothetical protein NEPG_01880 [Nematocida parisii ERTm1]
Length = 384
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 192/358 (53%), Gaps = 53/358 (14%)
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
I SY+ + +M +F + IADES LKN ++KR A +P + K + +LLSGTPAL
Sbjct: 35 ITSYNGASTYIDEIMPGDFFMGIADESQSLKNNESKRAQALVPFLTKLRSVILLSGTPAL 94
Query: 340 SRPIELFKQLEALYPDV--YKNVHEYGNRYCKGGVFGI------------YQGASNHEEL 385
S EL+ Q+ ++P + YK+ HE RYCK Y+G+ N +EL
Sbjct: 95 SNTYELYTQISIIHPTLFSYKDYHE---RYCKISDNHYQAANPKFKHLIKYRGSKNLDEL 151
Query: 386 HNLMKATVMIRRLKKDVLAQLPVKRRQQVFL--DVAEKDMRQIYALFRELEVVKGKIKAC 443
+ V+IRR+K+D L QL KRR V D+ +K+MR
Sbjct: 152 KIAVNELVLIRRVKQDCL-QLGKKRRIHVTFISDLVKKEMRS------------------ 192
Query: 444 KSEEEVQSLKFTEKNLINKI---YTDSAEAKIPAVLDYLETVI-EAGCKFLIFAHHQPML 499
++ K L N++ Y +A+ K+P +L +++ + K +IFAHH+ L
Sbjct: 193 -------NVPINTKTLQNELLLEYNKAAKEKLPDILCFIKQARNKTKEKIIIFAHHKDTL 245
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
+A L+++ K I+IDG T R+ L +F+ D+ AVLS+KA GLTL A+
Sbjct: 246 NA---LYMEFKDRAIKIDGSTARQKREILCDKFRNCPDIDVAVLSLKACSTGLTLVCATM 302
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
VIFAEL WTPGDL QAEDR +RIGQ +V +YYL+A+ VD +W +++ K L +
Sbjct: 303 VIFAELPWTPGDLHQAEDRIYRIGQTQTVKIYYLIASH-VDKHMWPLLKRKHNTLNGI 359
>gi|195342588|ref|XP_002037882.1| GM18506 [Drosophila sechellia]
gi|194132732|gb|EDW54300.1| GM18506 [Drosophila sechellia]
Length = 592
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 162/295 (54%), Gaps = 26/295 (8%)
Query: 363 YGNRYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
+ RYC G FG G SN EEL ++ M+RR K +VL QL K R+ V LD A
Sbjct: 256 FATRYCDGKQSTFGWDANGQSNLEELKVILNFKYMLRRTKVEVLPQLAEKNRETVVLDPA 315
Query: 420 -----EKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPA 474
E+ + A +EL+ KG+ SEE ++ + Y +AE K A
Sbjct: 316 LVWTNEETKETLDAFNKELKTAKGRA----SEE-----------ILLRFYARTAEVKTRA 360
Query: 475 VLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE 534
V YL+T+++ KF+IFAHH+ M+DAI KVH IRIDG T R V FQ+
Sbjct: 361 VCAYLKTIVKEQKKFIIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDLRSDSVDTFQK 420
Query: 535 KDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLL 594
K K A+LS+KA G+TLTAA ++FAEL W P L QAE RAHRIGQ V YL+
Sbjct: 421 KSSCKVALLSLKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLM 480
Query: 595 ANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKRC 649
A++T DDI+W+++++K E L +V EN + +++ ++P ++ + C
Sbjct: 481 AHNTADDIIWNMLKNKQEVLSKVGIFAENLQKATAT---AAPTSSHKIEEYFSPC 532
>gi|449678278|ref|XP_002170635.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like,
partial [Hydra magnipapillata]
Length = 316
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 161/287 (56%), Gaps = 17/287 (5%)
Query: 267 NTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKK 326
+T + P G NIISYD+ KL L+S F I++ DESHFLK+ A RT P+++
Sbjct: 44 STGKENPCKGQVNIISYDLASKLSKALLSQKFDIIVMDESHFLKSHNASRTKNIFPLLQA 103
Query: 327 AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHE 383
+++ +LLSGTPALSRP ELF Q+ AL ++ + H + RYC K +G G SN E
Sbjct: 104 SKHVILLSGTPALSRPKELFTQISALDQKLFGSFHSFRLRYCNAKETKYGWDDNGCSNSE 163
Query: 384 ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC 443
EL ++ +T+MIRR+K +VL QLP K+RQ + LD + +E K +C
Sbjct: 164 ELSAVLSSTIMIRRMKSEVLNQLPEKQRQIIILDPS------------FVECSKKLQNSC 211
Query: 444 KSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
+ V S K ++ + Y D++ AK+ V +++ + G K ++FAHH MLD I
Sbjct: 212 --QYFVTSQKKDKRTALLAYYEDTSSAKLNGVCEFISDKLLIGQKIIVFAHHIKMLDGIE 269
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGV 550
++ KK + IRIDG T RQ LV +F + A+LS+ A G
Sbjct: 270 EVVRKKNICSIRIDGSTNSKQRQILVDDFTNNKECLIAILSLTAAGT 316
>gi|402889336|ref|XP_003907975.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like,
partial [Papio anubis]
Length = 612
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 167/290 (57%), Gaps = 30/290 (10%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A Y L++ F+++ ++ K R W+F L K+++++ V+++ L +
Sbjct: 340 ADIGYSQDLIALFKQMDSRRYDVKTRKWSF---LLEEHSKLIAKVRCLPQVQLDPLPTTL 396
Query: 147 QRAIASA------SAAPDLREK-YDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS S PD+ E ++ + S L+PFQR GV FA+ GGR+LLAD+MG
Sbjct: 397 TLAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMG 456
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G +R
Sbjct: 457 LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVT---GKDR 513
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN++ R
Sbjct: 514 L--------------TAGLINIVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNSRTARCR 558
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
A +P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC
Sbjct: 559 AAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYC 608
>gi|422843982|ref|ZP_16890692.1| non-specific serine/threonine protein kinase [Lactobacillus
delbrueckii subsp. lactis DSM 20072]
gi|325685916|gb|EGD27981.1| non-specific serine/threonine protein kinase [Lactobacillus
delbrueckii subsp. lactis DSM 20072]
Length = 1185
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 153/471 (32%), Positives = 239/471 (50%), Gaps = 42/471 (8%)
Query: 158 DLREKYDQIPAHIESKLLPFQRDGV----RFALQHGGRILLADEMGLGKTIQAIAVATCF 213
D +E ++P +E L P+Q+ G R A QHG +LADEMGLGKT+Q I++
Sbjct: 711 DQKEAPLKLPTGLEKILRPYQKTGTAWMNRLA-QHGFGGILADEMGLGKTLQVISLLASQ 769
Query: 214 RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
+D P LI+ P+SL L+W A +++ P +VLS GS + ++ T+ ++
Sbjct: 770 KD-QPSLIVAPASLVLNWEAEFKKF---APEMKTLVLS---GSKKERSGQLADLTEIDVV 822
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPI-IKKAQYALL 332
I SYD++ + F + DE+ +KN RTAA + + KA++
Sbjct: 823 ------ITSYDLLKRDIANYEPHTFAYEVIDEAQMIKNP---RTAAAKAVSVVKAKHRFA 873
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
L+GTP +R EL+ + P K+ E+ + V Q N N M
Sbjct: 874 LTGTPIENRLSELWSIFNFVMPGFLKSYREFKKDFESPIVKEDDQDCLNR---LNQMVGP 930
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSE----EE 448
++RRLK+DVL LP K + ++ + K+ R++Y E+ +K K+ A E E+
Sbjct: 931 FILRRLKRDVLKDLPDKLEEVRYVGMG-KEQRKLYDA--EIARLKNKVMAEDDEGIKREQ 987
Query: 449 VQSLK--------FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLD 500
++ L + L+ + Y +E ++ A +D +++ I+ G K L+F+ MLD
Sbjct: 988 IEILAALTRIREICCDPGLLYEDYKGESEKRL-ACVDLIKSAIDGGHKVLLFSQFTSMLD 1046
Query: 501 AIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD-VKAAVLSMKAGGVGLTLTAAST 559
+ + +++ +RIDG TP A R LV F KD K ++S+KAGG GL LT A T
Sbjct: 1047 LLEESLKAEEIGFLRIDGQTPKARRLTLVNVFNHKDSPAKVFLISLKAGGTGLNLTGADT 1106
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
VI + W QA DRAHRIGQ V VY L+A DTV++ + D+ +K
Sbjct: 1107 VIHYDPWWNVAAQNQATDRAHRIGQEKKVTVYKLIAKDTVEEAILDLQEAK 1157
>gi|345883501|ref|ZP_08834942.1| hypothetical protein HMPREF0666_01118 [Prevotella sp. C561]
gi|345043606|gb|EGW47661.1| hypothetical protein HMPREF0666_01118 [Prevotella sp. C561]
Length = 485
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 225/461 (48%), Gaps = 36/461 (7%)
Query: 176 PFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMI 235
P+QR+G+ ++ R+L+ DE GLGKT+Q+I + + +P L++ PSSL+++W
Sbjct: 14 PYQREGILAGMEMK-RLLIGDEPGLGKTLQSIGIVDT-ANAYPCLVVCPSSLKINWQREF 71
Query: 236 QQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDV----VLKLQN 291
+++ N + +VL + + + + L +D+ +L++
Sbjct: 72 EKFTN----KKALVLENAVQTTWPYLLKMRMHHVAICNYESLRKYFVWDIKQKGSFRLKD 127
Query: 292 ILMSSNFKI---VIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQ 348
++ + KI +I DESH +K+ A++T T I Y +LLSGTP ++RP +L Q
Sbjct: 128 VVFNPAIKIFRSIIIDESHRVKDPSAQQTIFTRGIADGKPYRILLSGTPVVNRPADLIAQ 187
Query: 349 LEAL--YPDVYKNVH---EYGNRYCKGGVFGIYQGASNHEELHNLMK------ATVMIRR 397
L + P+ H EYG GG + +E+ NL K + MIRR
Sbjct: 188 LSIMGRLPEFGGRTHFLQEYG-----GGDLNRENRSQEPDEVKNLDKLSSELYSRCMIRR 242
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEK 457
K VL QLP K R +++D++ + A +L + K C E + ++
Sbjct: 243 EKAKVLTQLPDKTRTDLYVDISNSEEYACAA--EDLATYLREYKECTDYEVARKMRMEAL 300
Query: 458 NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRID 517
+ + +A+ K+ +D+ T + G ++F ++D + + F K + +
Sbjct: 301 VKFMALRSIAAKGKVKQAIDFCRTFLANGKPLILFCSLHEIVDELKKAFPKA----VTVT 356
Query: 518 GGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
G +QA V FQ + + S+KA GVGLTLTA+S V F E WT D Q ED
Sbjct: 357 GRDSMMMKQAAVDAFQS-GQAQLIICSIKAAGVGLTLTASSNVAFCEFPWTYSDCCQCED 415
Query: 578 RAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
RAHRIGQ +V YYL+ T+D +++++++K Q++
Sbjct: 416 RAHRIGQKDNVTCYYLIGRGTIDHTLYNIIQNKRSVANQIM 456
>gi|300811728|ref|ZP_07092202.1| SNF2 family N-terminal domain protein [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
gi|300497304|gb|EFK32352.1| SNF2 family N-terminal domain protein [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
Length = 1185
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 158/494 (31%), Positives = 248/494 (50%), Gaps = 46/494 (9%)
Query: 158 DLREKYDQIPAHIESKLLPFQRDGV----RFALQHGGRILLADEMGLGKTIQAIAVATCF 213
D +E ++P +E L P+Q+ G R A QHG +LADEMGLGKT+Q I++
Sbjct: 711 DQKEAPLKLPTGLEKILRPYQKTGTAWMNRLA-QHGFGGILADEMGLGKTLQVISLLASQ 769
Query: 214 RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
+D P LI+ P+SL L+W A +++ P +VLS GS + ++ T ++
Sbjct: 770 KD-QPSLIVAPASLVLNWEAEFKKF---APEMKTLVLS---GSKKERSGQLADLTDIDVV 822
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPI-IKKAQYALL 332
I SYD++ + F + DE+ +KN RTAA + + KA++
Sbjct: 823 ------ITSYDLLKRDITNYEPHTFAYEVIDEAQMIKNP---RTAAAKAVSVVKAKHRFA 873
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
L+GTP +R EL+ + P K+ E+ + V Q N + M
Sbjct: 874 LTGTPIENRLSELWSIFNFVMPGFLKSYREFKKDFESPIVKEDDQDCLNR---LSQMVGP 930
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSE----EE 448
++RRLKKDVL LP K + ++ + K+ R++Y E+ +K K+ A E E+
Sbjct: 931 FILRRLKKDVLKDLPDKLEEVRYVGMG-KEQRKLYD--AEIARLKNKVMAEDDEGIKREQ 987
Query: 449 VQSLK--------FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLD 500
++ L + L+ + Y +E ++ A +D +++ I+ G K L+F+ MLD
Sbjct: 988 IEILAALTRIREICCDPGLLYEDYKGESEKRL-ACVDLIKSAIDGGHKVLLFSQFTSMLD 1046
Query: 501 AIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD-VKAAVLSMKAGGVGLTLTAAST 559
+ + +++ +RIDG TP A R LV F KD K ++S+KAGG GL LT A T
Sbjct: 1047 LLEESLKAEEIVFLRIDGQTPKAKRLTLVNVFNHKDSPAKVFLISLKAGGTGLNLTGADT 1106
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
VI + W QA DRAHRIGQ V VY L+A DTV++ + D+ +K Q+
Sbjct: 1107 VIHYDPWWNVAAQNQATDRAHRIGQEKKVTVYKLIAKDTVEEAILDLQEAK----SQLAQ 1162
Query: 620 GHENSLEVSSSQIR 633
G + VSS+ ++
Sbjct: 1163 GILTAESVSSTSLQ 1176
>gi|418035093|ref|ZP_12673552.1| Non-specific serine/threonine protein kinase [Lactobacillus
delbrueckii subsp. bulgaricus CNCM I-1519]
gi|354691031|gb|EHE90971.1| Non-specific serine/threonine protein kinase [Lactobacillus
delbrueckii subsp. bulgaricus CNCM I-1519]
Length = 757
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 155/478 (32%), Positives = 236/478 (49%), Gaps = 56/478 (11%)
Query: 158 DLREKYDQIPAHIESKLLPFQRDGV----RFALQHGGRILLADEMGLGKTIQAIAVATCF 213
D +E ++P +E L P+Q+ G R A QHG +LADEMGLGKT+Q I++
Sbjct: 283 DQKEAPLKLPTGLEKILRPYQKTGTAWMNRLA-QHGFGGILADEMGLGKTLQVISLLASQ 341
Query: 214 RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
+D P LI+ P+SL L+W A +++ P +VLS RSG
Sbjct: 342 KD-QPSLIVAPASLVLNWEAEFKKF---APEMKTLVLSG-SKKERSG------------- 383
Query: 274 LDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPI-IK 325
L ++ DVV+ ++L F + DE+ +KN RTAA + +
Sbjct: 384 --QLADLTDIDVVITFYDLLKRDIANYEPHTFAYEVIDEAQMIKNP---RTAAAKSVSVV 438
Query: 326 KAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEEL 385
KA++ L+GTP +R EL+ + P K+ E+ + V Q N
Sbjct: 439 KAKHRFALTGTPIENRLSELWSIFNFVMPGFLKSYREFKKDFESPIVKEDDQDCLNR--- 495
Query: 386 HNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKS 445
+ M ++RRLKKDVL LP K + ++ V K+ R++Y E+ +K K+ A
Sbjct: 496 LSQMVGPFILRRLKKDVLKDLPDKLEEVRYVGVG-KEQRRLYD--AEIARLKNKVMAEDD 552
Query: 446 E----EEVQSLK--------FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFA 493
E E+++ L + L+ + Y +E ++ A +D +++ I+ G K L+F+
Sbjct: 553 EGIKREQIEILAALTRIREICCDPGLLYEDYKGESEKRL-ACVDLIKSAIDEGHKVLLFS 611
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD-VKAAVLSMKAGGVGL 552
MLD + + +++ +RIDG TP A R LV F KD K ++S+KAGG GL
Sbjct: 612 QFTSMLDLLEESLKAEEIGFLRIDGQTPKARRLTLVNVFNHKDSPAKVFLISLKAGGTGL 671
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
LT A TVI + W QA DRAHRIGQ V VY L+A DTV++ + D+ +K
Sbjct: 672 NLTGADTVIHYDPWWNVAAQNQATDRAHRIGQEKKVTVYKLIAKDTVEEAILDLQEAK 729
>gi|385815993|ref|YP_005852384.1| SNF2-related domain:Helicase, C-terminal:SWIM Zn-finger
[Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|325126030|gb|ADY85360.1| SNF2-related domain:Helicase, C-terminal:SWIM Zn-finger
[Lactobacillus delbrueckii subsp. bulgaricus 2038]
Length = 637
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 155/478 (32%), Positives = 236/478 (49%), Gaps = 56/478 (11%)
Query: 158 DLREKYDQIPAHIESKLLPFQRDGV----RFALQHGGRILLADEMGLGKTIQAIAVATCF 213
D +E ++P +E L P+Q+ G R A QHG +LADEMGLGKT+Q I++
Sbjct: 163 DQKEAPLKLPTGLEKILRPYQKTGTAWMNRLA-QHGFGGILADEMGLGKTLQVISLLASQ 221
Query: 214 RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
+D P LI+ P+SL L+W A +++ P +VLS RSG
Sbjct: 222 KDQ-PSLIVAPASLVLNWEAEFKKF---APEMKTLVLSG-SKKERSG------------- 263
Query: 274 LDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPI-IK 325
L ++ DVV+ ++L F + DE+ +KN RTAA + +
Sbjct: 264 --QLADLTDIDVVITFYDLLKRDIANYEPHTFAYEVIDEAQMIKNP---RTAAAKSVSVV 318
Query: 326 KAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEEL 385
KA++ L+GTP +R EL+ + P K+ E+ + V Q N
Sbjct: 319 KAKHRFALTGTPIENRLSELWSIFNFVMPGFLKSYREFKKDFESPIVKEDDQDCLNR--- 375
Query: 386 HNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKS 445
+ M ++RRLKKDVL LP K + ++ V K+ R++Y E+ +K K+ A
Sbjct: 376 LSQMVGPFILRRLKKDVLKDLPDKLEEVRYVGVG-KEQRRLYD--AEIARLKNKVMAEDD 432
Query: 446 E----EEVQSLK--------FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFA 493
E E+++ L + L+ + Y +E ++ A +D +++ I+ G K L+F+
Sbjct: 433 EGIKREQIEILAALTRIREICCDPGLLYEDYKGESEKRL-ACVDLIKSAIDEGHKVLLFS 491
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD-VKAAVLSMKAGGVGL 552
MLD + + +++ +RIDG TP A R LV F KD K ++S+KAGG GL
Sbjct: 492 QFTSMLDLLEESLKAEEIGFLRIDGQTPKARRLTLVNVFNHKDSPAKVFLISLKAGGTGL 551
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
LT A TVI + W QA DRAHRIGQ V VY L+A DTV++ + D+ +K
Sbjct: 552 NLTGADTVIHYDPWWNVAAQNQATDRAHRIGQEKKVTVYKLIAKDTVEEAILDLQEAK 609
>gi|224009872|ref|XP_002293894.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970566|gb|EED88903.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 718
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 151/474 (31%), Positives = 231/474 (48%), Gaps = 64/474 (13%)
Query: 167 PAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVAT---CFRDVWP----V 219
P+ L PFQ GV L R+LLAD+MGLGKT+Q+I+ C ++ P V
Sbjct: 35 PSQPSRALFPFQEVGVA-RLVSDRRLLLADDMGLGKTVQSISAINSLFCKGELSPSTFRV 93
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD---G 276
LI+ P S+ W +++W++ + V L +VS+ + +D G
Sbjct: 94 LIICPKSVVSVWVDELEEWID----DRYVSLEH-------SLHVVSAGIADPLDVDASFG 142
Query: 277 LFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQ-----YAL 331
II+YD+ + ++IL + F ++I DE+H+LK+ Q +RT A L I +K++ Y
Sbjct: 143 TIQIINYDICHRHRDILQNVPFDVLICDEAHYLKSPQTQRTDAILGIKEKSKGIQSRYTW 202
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
LSGTP L+R E++ L A+ D + + + + +Y G Y N +L +++
Sbjct: 203 FLSGTPILNRLNEIYPLLFAINKDKWNSYYAFKKKYA-----GSYDEVVNLGQLKLMLRP 257
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAE--KDMRQIYAL---FRELEVVKGKIKACKSE 446
+ ++RR K DVL LP K V L+ +E K+ Q +A EL V + K A
Sbjct: 258 S-LLRRKKVDVLKDLPPKLHSVVSLEGSEGVKEREQEFAFESYGMELNVAQIKDSAV--- 313
Query: 447 EEVQSL-KFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKF---------------- 489
++ SL KF E K Y K A+L L V F
Sbjct: 314 -DISSLGKFGENASSLKEYGIGTYLKGTALLSALAKVRSITSSFKLEPSVQLLKQYIMCE 372
Query: 490 --LIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKA 547
++FAHH+ ++ + + F C+ I GG SR V FQ + + S++A
Sbjct: 373 KVVVFAHHRQLIMDLVEAFGDS---CVHIIGGMDAKSRAEAVQRFQNDASCRLFIGSIRA 429
Query: 548 GGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 601
GVGLTLTA+S V+F EL W+P + QAEDR HR+GQ SV V Y + ++D+
Sbjct: 430 AGVGLTLTASSHVVFLELDWSPSIMTQAEDRCHRVGQQDSVLVEYFVFKGSLDE 483
>gi|313124061|ref|YP_004034320.1| DNA/RNA helicase, superfamily ii, snf2 family protein [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312280624|gb|ADQ61343.1| DNA/RNA helicase, superfamily II, SNF2 family protein [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 1185
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 155/493 (31%), Positives = 246/493 (49%), Gaps = 44/493 (8%)
Query: 158 DLREKYDQIPAHIESKLLPFQRDGV----RFALQHGGRILLADEMGLGKTIQAIAVATCF 213
D +E ++ +E L P+Q+ G R A QHG +LADEMGLGKT+Q I++
Sbjct: 711 DQKEAPLKLATGLEKILRPYQKTGTAWMNRLA-QHGFGGILADEMGLGKTLQVISLLASQ 769
Query: 214 RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
+D P LI+ P+SL L+W A +++ P +VLS GS + ++ T+ ++
Sbjct: 770 KD-QPSLIVAPASLVLNWEAEFKKF---APEMKTLVLS---GSKKERSGQLADLTEIDVV 822
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
I SYD++ + F + DE+ +KN + AA + + KA++ L
Sbjct: 823 ------ITSYDLLKRDIANYEPHTFAYEVIDEAQMIKNPRT--AAAKVVSVVKAKHRFAL 874
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV 393
+GTP +R EL+ + P K+ E+ + V Q N N M
Sbjct: 875 TGTPIENRLSELWSIFNFVMPGFLKSYREFKKDFESPIVKEDDQDCLNR---LNQMVGPF 931
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSE----EEV 449
++RRLK+DVL LP K + ++ + K+ R++Y E+ +K K+ A E E++
Sbjct: 932 ILRRLKRDVLKDLPDKLEEVRYVGMG-KEQRKLYDA--EIARLKNKVMAEDDEGIKREQI 988
Query: 450 QSLK--------FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDA 501
+ L + L+ + Y +E ++ A +D +++ I+ G K L+F+ MLD
Sbjct: 989 EILAALTRIREICCDPGLLYEDYKGESEKRL-ACVDLIKSAIDGGHKVLLFSQFTSMLDL 1047
Query: 502 IHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD-VKAAVLSMKAGGVGLTLTAASTV 560
+ + ++ +RIDG TP A R LV F KD K ++S+KAGG GL LT A TV
Sbjct: 1048 LEESLKADEIGFLRIDGQTPKARRLTLVNVFNHKDSPAKVFLISLKAGGTGLNLTGADTV 1107
Query: 561 IFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
I + W QA DRAHRIGQ V VY L+A DTV++ + D+ +K Q+ G
Sbjct: 1108 IHYDPWWNVAAQNQATDRAHRIGQEKKVTVYKLIAKDTVEEAILDLQEAK----SQLAQG 1163
Query: 621 HENSLEVSSSQIR 633
+ VSS+ ++
Sbjct: 1164 ILTAESVSSASLQ 1176
>gi|193084170|gb|ACF09835.1| helicase SNF2/RAD54 family [uncultured marine crenarchaeote
AD1000-207-H3]
Length = 569
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/485 (28%), Positives = 231/485 (47%), Gaps = 26/485 (5%)
Query: 150 IASASAAPDLREKYDQIPA-HIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIA 208
I + P + + IP KLL FQ+ G+ F L+ G LLAD+MGLGKT+Q +A
Sbjct: 84 IIKKPSNPKIEKLSKAIPKKQFRGKLLNFQKMGLDFLLKSSGNALLADDMGLGKTVQTLA 143
Query: 209 VATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNT 268
+ PVL++ P +W I++++ +V + T + S
Sbjct: 144 YIASEKQSLPVLVVAPLVTLTNWQREIERFMKKKSKNGRIVEDGV-----PTITTIRSGK 198
Query: 269 KRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFL--KNAQAKRTAATLPIIKK 326
+ + D F +I+Y+++ K Q L + ++ DE L K Q R L +K
Sbjct: 199 HKELS-DYDFYLINYELLHKRQIDLSKLKIRTLVCDEVQHLRSKTTQKYRAVKNLAGMKS 257
Query: 327 AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC----KGGVFGIYQGASNH 382
+Y + LSGTP + E++ ++ L P + N E+ +C +G + S
Sbjct: 258 VKYRVGLSGTPIYNHGSEIWPIVDILKPGLLGNFKEFCEYFCYQDERGKAIVV---PSKR 314
Query: 383 EELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKA 442
+ L ++++ VM+RR K DVL +L K R + +D E + +EL + K++
Sbjct: 315 DGLRHVLQRDVMLRRKKSDVLKELKDKVRYKEAIDADETYYK------KELNKIWNKLEE 368
Query: 443 CKSEEEVQSLKFTE-KNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDA 501
+ E + KF + I + AK+P V+D+++ ++E ++F HH +
Sbjct: 369 EQKSAETEFSKFASYQRAIQSERQAAGVAKLPHVIDFVKNIMEIEESVVVFCHHISIHKL 428
Query: 502 IHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVI 561
+H+ ++ + I GG RQ + FQ D K + ++AG +G+ LT A VI
Sbjct: 429 LHESL--QEFNPASIIGGQSDKVRQKNIDYFQN-GDTKLLIAGLRAGNLGINLTRAKYVI 485
Query: 562 FAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGH 621
FAEL W P QAEDR HRIGQ ++V YYL+ T+D+ V +++ K + ++D
Sbjct: 486 FAELDWVPAVHRQAEDRLHRIGQKNTVFAYYLIGKRTLDEHVANILVDKSYEIDAIMDES 545
Query: 622 ENSLE 626
S E
Sbjct: 546 HESYE 550
>gi|118576973|ref|YP_876716.1| superfamily II DNA/RNA helicase, SNF2 family [Cenarchaeum symbiosum
A]
gi|118195494|gb|ABK78412.1| superfamily II DNA/RNA helicase, SNF2 family [Cenarchaeum symbiosum
A]
Length = 574
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 139/490 (28%), Positives = 240/490 (48%), Gaps = 49/490 (10%)
Query: 157 PDLREKYDQI-PA-HIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFR 214
P EK D++ P KLL FQ++G+ F ++ G LL DEMGLGKT+Q +A + R
Sbjct: 90 PHRLEKLDRVRPGEQFRGKLLDFQKEGLDFLIKSSGNALLVDEMGLGKTVQTLAYLSSER 149
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWL-----------NIPPSEIVVVLSQLGGSNRSGFTI 263
P L++ P +W I++++ + PPS +++ + G F I
Sbjct: 150 QALPALVVAPLVTLHNWQREIERFVKKKSKNGRILEDQPPSSVMIRRGRGGKIGEYDFYI 209
Query: 264 VSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAAT--L 321
I+Y+++ K + L N K ++ DE L++ K+ AA L
Sbjct: 210 -----------------INYELLDKRLDDLSELNIKSLVCDEVQNLRSKSTKKYAAVKKL 252
Query: 322 PIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC---KGGVFGIYQG 378
+ + + LSGTP +R E++ ++ L P + + E+ +C + G + +G
Sbjct: 253 AELDSIRQRVGLSGTPIYNRGSEIWPIVDILKPGLLGSYSEFCEYFCYVNEKGKAIVLEG 312
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKD--MRQIYALFRELEVV 436
E L ++ VM+RR K DVL +L K R + +D ++ D ++++ ++++LE
Sbjct: 313 --KRESLRRELQKHVMLRRKKSDVLKELKDKVRYKEVID-SDTDYYLKELDRIWKKLE-- 367
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQ 496
+ KS E + + I + AKIP +++++ ++E ++F HH+
Sbjct: 368 ----EEQKSAESGFDRSASLQRAIQSERQAAGAAKIPHIINFVRNIMEIEESVVVFCHHK 423
Query: 497 PMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTA 556
+ +H + + + I GG SRQ + FQE K + ++AG VG+ L+
Sbjct: 424 AIHKILHGVL--SEFSPVSIIGGQSDRSRQDQIDSFQEGRS-KLMIAGLRAGNVGINLSR 480
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A VIFAEL W+P QAEDR HRIGQ ++V YYL+ N T+D+ V +++ K +
Sbjct: 481 ARYVIFAELDWSPAIHRQAEDRLHRIGQKNTVFAYYLIGNGTLDEHVANILVDKSYEIDS 540
Query: 617 VLDGHENSLE 626
++D +S E
Sbjct: 541 IMDETADSYE 550
>gi|402889350|ref|XP_003907981.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like,
partial [Papio anubis]
Length = 328
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 160/272 (58%), Gaps = 13/272 (4%)
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKG 438
+SN EL L++ VM+RRLK DVL+QLP K+R+ V + + R AL
Sbjct: 1 SSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAAL--------- 51
Query: 439 KIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQP 497
A K + K +K+ + + +AEAKIP+V++Y+ ++E+G KFL+FAHH+
Sbjct: 52 -DAAAKEMTTMDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAHHKV 110
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
+LDAI Q +K V IRIDG T A R+ L +FQ + AVLS+ A +GLT ++A
Sbjct: 111 VLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTFSSA 170
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ L +
Sbjct: 171 DLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVLAEA 230
Query: 618 LDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
N E++ S + P +QK D F K
Sbjct: 231 GLSETNFSEMTESTDYLYKDPKQQKIYDLFQK 262
>gi|380797685|gb|AFE70718.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1, partial [Macaca
mulatta]
Length = 327
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 152/258 (58%), Gaps = 13/258 (5%)
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL 452
VM+RRLK DVL+QLP K+R+ V + + R AL A K +
Sbjct: 14 VMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAAL----------DAAAKEMTTMDKT 63
Query: 453 KFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKV 511
K +K+ + + +AEAKIP+V++Y+ ++E+G KFL+FAHH+ +LDAI Q +K V
Sbjct: 64 KQQQKDALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAHHKVVLDAITQELERKHV 123
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
IRIDG T A R+ L +FQ + AVLS+ A +GLT ++A V+FAEL W PG
Sbjct: 124 QHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTFSSADLVVFAELFWNPGV 183
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ 631
LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ L + N E++ S
Sbjct: 184 LIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVLAEAGLSETNFSEMTEST 243
Query: 632 --IRSSPAKQKTLDSFLK 647
+ P +Q+ D F K
Sbjct: 244 DYLYKDPKQQQIYDLFQK 261
>gi|395732312|ref|XP_002812483.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3
[Pongo abelii]
Length = 827
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 141/235 (60%), Gaps = 9/235 (3%)
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL QLP K RQ++ D+ +++ F E E + + E
Sbjct: 1 MIRRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAME------- 53
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 54 -TVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTR 112
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG +
Sbjct: 113 YIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHI 172
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 173 KQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQA 227
>gi|193785976|dbj|BAG54763.1| unnamed protein product [Homo sapiens]
Length = 827
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 141/235 (60%), Gaps = 9/235 (3%)
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL QLP K RQ++ D+ +++ F E E + + E
Sbjct: 1 MIRRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAME------- 53
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 54 -TVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTR 112
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG +
Sbjct: 113 YIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHI 172
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 173 KQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQA 227
>gi|426337274|ref|XP_004032638.1| PREDICTED: DNA annealing helicase and endonuclease ZRANB3 [Gorilla
gorilla gorilla]
Length = 827
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 141/235 (60%), Gaps = 9/235 (3%)
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL QLP K RQ++ D+ +++ F E E + + E
Sbjct: 1 MIRRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAME------- 53
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 54 -TVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTR 112
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG +
Sbjct: 113 YIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHI 172
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 173 KQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQA 227
>gi|320526909|ref|ZP_08028099.1| protein, SNF2 family [Solobacterium moorei F0204]
gi|320132877|gb|EFW25417.1| protein, SNF2 family [Solobacterium moorei F0204]
Length = 1079
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 154/490 (31%), Positives = 234/490 (47%), Gaps = 77/490 (15%)
Query: 166 IPAHIESKLLPFQRDGVR--FALQH---GGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
IP IE L P+Q+ G R +AL+ GG LLADEMGLGK+IQ I++ ++D L
Sbjct: 615 IPQEIEPILRPYQKKGFRWLYALKENHLGG--LLADEMGLGKSIQIISLLAAWKDRKRTL 672
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN- 279
I+ PSSL +WA I +++ P ++ SGF +N ++ + L N
Sbjct: 673 IVCPSSLVYNWANEINKFM--PNMHYTMI---------SGF----ANIRKELIHTSLEND 717
Query: 280 --IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
I SYD + + ++ + F + DE+ ++KNA + I + + + L+GTP
Sbjct: 718 ILITSYDALKRDIDVYRTMEFSCQVIDEAQYIKNASTLAAQSVKEI--DSHFRIALTGTP 775
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNL--------- 388
+R EL+ + + P G FG YQ + EL +
Sbjct: 776 IENRLSELWSIFDFILP----------------GFFGSYQKFRTNYELPIVRDQDEFLEA 819
Query: 389 ----MKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY-ALFRELEVVKGKIKAC 443
M ++RR KKDVL LP K + V+ E + + +Y A + L+++ K
Sbjct: 820 ELQKMVTPFILRRRKKDVLHDLPDKI-EDVYYGQLEDEQKDLYKARVQRLKLMLQK---- 874
Query: 444 KSEEEVQSLKF-------------TEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFL 490
+S+EE + K + +LI Y ++ AK LD +E IE G K L
Sbjct: 875 QSDEEFKENKIAVLAELTRLRQLCCDPHLIYDHYKGNS-AKKELCLDIVENAIEEGHKIL 933
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGV 550
+F+ MLD + Q F KK + ++ G TP R +V FQ DDV +S+KAGG
Sbjct: 934 LFSQFTSMLDTLTQEFDKKGIRYHKLVGSTPQFERARMVESFQ-TDDVPIFCISLKAGGT 992
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
GL LTAA VI + W QA DRAHRIGQ + VNV+ L+ DT+++ + + + K
Sbjct: 993 GLNLTAADIVIHYDPWWNTAVENQASDRAHRIGQTNVVNVFRLIIKDTIEERIIQLQKEK 1052
Query: 611 LENLGQVLDG 620
++L G
Sbjct: 1053 SNLADRILSG 1062
>gi|432103391|gb|ELK30496.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Myotis davidii]
Length = 387
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 164/276 (59%), Gaps = 15/276 (5%)
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V + A R
Sbjct: 50 YSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKMV-----------VVAPGRISAK 98
Query: 436 VKGKIKACKSEEEVQ-SLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFA 493
+ + A E + + K ++ + + +AEAKIP V++Y+ ++E+G KFL+FA
Sbjct: 99 ARASLDAAAKEMTTKDNSKGQQREALILFFHRTAEAKIPCVIEYILDLLESGREKFLVFA 158
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLT 553
HH+ +LDAI + +KKV IRIDG T A R+ L +FQ + AVLS+ A +GLT
Sbjct: 159 HHKVVLDAITKELERKKVQHIRIDGATSSADREQLCQQFQLSERHAVAVLSITAANMGLT 218
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLEN 613
++A V+FAEL W PG L+QAEDR HRIGQ +SV ++YL+A T DD +W +++ K++
Sbjct: 219 FSSADLVVFAELFWNPGVLMQAEDRVHRIGQSNSVGIHYLVARGTADDYLWPLIQEKIKV 278
Query: 614 LGQ--VLDGHENSLEVSSSQIRSSPAKQKTLDSFLK 647
LG+ V + + + + ++ I P + K D F K
Sbjct: 279 LGEAGVSEANFSEMTEATDYIYKDPKQLKIYDLFQK 314
>gi|67587278|ref|XP_665245.1| DNA helicase [Cryptosporidium hominis TU502]
gi|54655812|gb|EAL35016.1| DNA helicase [Cryptosporidium hominis]
Length = 405
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 152/257 (59%), Gaps = 21/257 (8%)
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK-DMRQIYALFRELE 434
+ G+ N EELH ++ +VMIRRLKK VL +LP K+R ++ L++ +K ++ I L +
Sbjct: 142 FYGSRNTEELHLFIRESVMIRRLKKQVLHELPPKQRSKIPLEIKDKVGIKMIKELLAD-- 199
Query: 435 VVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFA 493
C+ E + ++ N ++ + E KI V +Y+E ++E K++IF
Sbjct: 200 ------PNCQVELSNFDEDESSSSMCN-LHKLTCEIKINPVQEYIEYLLEYNDEKYVIFG 252
Query: 494 HHQPMLDAIHQLFLKK-KVHC--------IRIDGGTPPASRQALVTEFQEKDDVKAAVLS 544
HH MLDAI + LKK K C IRIDG TP R+ V EFQ ++ K A+LS
Sbjct: 253 HHHVMLDAIESVLLKKRKTACNSGGPFLFIRIDGKTPGNKREEYVKEFQNNENCKVALLS 312
Query: 545 MKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIG-QVSSVNVYYLLANDTVDDIV 603
+ A G GL LT+A TVIFAEL W PG ++QAEDR HRIG Q S +N++YL+A +T+DD +
Sbjct: 313 ITACGQGLNLTSAGTVIFAELYWVPGTMLQAEDRCHRIGTQYSCINIHYLIAEETLDDKM 372
Query: 604 WDVVRSKLENLGQVLDG 620
W + K + + LDG
Sbjct: 373 WGTLCRKQKIMASTLDG 389
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGAS 380
+P++ KA+ A+LLSGTPAL+ P EL++Q+ A+ V N Y + K S
Sbjct: 3 VPLLHKARRAILLSGTPALNNPTELYEQINAI---VKPNPQFYSEKKNK--------TKS 51
Query: 381 NHEELHNLMKATVMIRRLKKD 401
N EEL K I++L D
Sbjct: 52 NKEELGTRKKTKSRIKKLTSD 72
>gi|66357602|ref|XP_625979.1| HARP like SWI/SNF ATpase [Cryptosporidium parvum Iowa II]
gi|46227244|gb|EAK88194.1| HARP like SWI/SNF ATpase [Cryptosporidium parvum Iowa II]
Length = 908
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 152/257 (59%), Gaps = 21/257 (8%)
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK-DMRQIYALFRELE 434
+ G+ N EELH ++ +VMIRRLKK VL +LP K+R ++ L++ +K ++ I L +
Sbjct: 645 FYGSRNTEELHLFIRESVMIRRLKKQVLHELPPKQRSKIPLEIKDKVGIKMIKELLAD-- 702
Query: 435 VVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFA 493
C+ E + ++ N ++ + E KI V +Y+E ++E K++IF
Sbjct: 703 ------PNCQVELSNFDEDDSSSSMCN-LHKLTCEIKINPVQEYIEYLLEYNDEKYVIFG 755
Query: 494 HHQPMLDAIHQLFLKK-KVHC--------IRIDGGTPPASRQALVTEFQEKDDVKAAVLS 544
HH MLDAI + LKK K C IRIDG TP R+ V EFQ ++ K A+LS
Sbjct: 756 HHHVMLDAIESVLLKKRKTACNSGGPFLFIRIDGKTPGNKREEYVKEFQNNENCKVALLS 815
Query: 545 MKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIG-QVSSVNVYYLLANDTVDDIV 603
+ A G GL LT+A TVIFAEL W PG ++QAEDR HRIG Q S +N++YL+A +T+DD +
Sbjct: 816 ITACGQGLNLTSAGTVIFAELYWVPGTMLQAEDRCHRIGTQYSCINIHYLIAEETLDDKM 875
Query: 604 WDVVRSKLENLGQVLDG 620
W + K + + LDG
Sbjct: 876 WGTLCRKQKIMASTLDG 892
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 118/188 (62%), Gaps = 26/188 (13%)
Query: 172 SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHW 231
S L PFQ+ G+ L+ GR+L+ DEMGLGKT+QA+++ T FR WPVL++ PSS+R W
Sbjct: 369 SSLRPFQKVGILVGLKKHGRVLIGDEMGLGKTLQALSIITYFRQEWPVLVICPSSIRFQW 428
Query: 232 AAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNT-----KRNIPLDGLFNIISYDVV 286
WL+ EI N+S T++ ++ K NI IISYD++
Sbjct: 429 YQQALDWLS---PEI----------NKSNITLIRTSNDTYSRKSNII------IISYDLI 469
Query: 287 LKLQNI--LMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
+ ++ S+F++VIADESHFLKN+ AKRT +P++ KA+ A+LLSGTPAL+ P E
Sbjct: 470 TRNEHFRSFFGSDFQVVIADESHFLKNSTAKRTQMIVPLLHKARRAILLSGTPALNNPTE 529
Query: 345 LFKQLEAL 352
L++Q+ A+
Sbjct: 530 LYEQINAI 537
>gi|193084404|gb|ACF10057.1| SNF2-related protein [uncultured marine crenarchaeote
SAT1000-21-C11]
Length = 569
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/462 (28%), Positives = 226/462 (48%), Gaps = 25/462 (5%)
Query: 172 SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHW 231
KLL FQ+ G+ F L+ G LLAD+MGLGKT+Q +A + PVL++ P +W
Sbjct: 107 GKLLNFQKMGLDFLLKSSGNALLADDMGLGKTVQTLAYIASEKQSSPVLVVAPLVTLTNW 166
Query: 232 AAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQN 291
I++++ +V + T + S ++ IP D F +I+Y+++ K Q
Sbjct: 167 HREIERFMKKKSRNGRIVEDGV-----PTITSIRSGKQKEIP-DHDFYLINYELLYKRQI 220
Query: 292 ILMSSNFKIVIADESHFLKNAQAK--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQL 349
L + ++ DE L++ K R L +K +Y + LSGTP + E++ +
Sbjct: 221 DLSKLKIRTLVCDEVQHLRSKTTKKYRAIKKLARMKSIKYRVGLSGTPIYNHGSEIWPIV 280
Query: 350 EALYPDVYKNVHEYGNRYC----KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
+ L P + E+ +C +G + S + L ++++ VM+RR K DVL +
Sbjct: 281 DILKPGLLGTFKEFCEYFCYQDERGKAIVV---PSKRDSLRHVLQRDVMLRRKKSDVLKE 337
Query: 406 LPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTE-KNLINKIY 464
L K R + +D E + EL + K++ + E + K + I
Sbjct: 338 LKDKVRYKETIDADETYYKN------ELNKIWSKLEEEQKSAETEFSKVASYQRAIQSER 391
Query: 465 TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPAS 524
+ AK+ V+D+++ ++E ++F HH+ + +H+ ++ + I GG
Sbjct: 392 QAAGVAKLHHVIDFVKNIMEIEESVVVFCHHKSIHKLLHESL--QEFNPAAIIGGQTDKV 449
Query: 525 RQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQ 584
RQ + FQ K V+ ++AG +G+ LT A VIFAEL W+P QAEDR HRIGQ
Sbjct: 450 RQENIDNFQN-GGTKLIVVGLRAGNLGINLTRAKYVIFAELDWSPAIHRQAEDRLHRIGQ 508
Query: 585 VSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
++V YYL+ T+D+ V +++ K + ++D ++ E
Sbjct: 509 KNTVFAYYLIGKRTLDEHVANILVDKSYEIDAIMDESHDAYE 550
>gi|340505166|gb|EGR31523.1| hypothetical protein IMG5_107420 [Ichthyophthirius multifiliis]
Length = 600
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 145/244 (59%), Gaps = 24/244 (9%)
Query: 198 MGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLN-IPPSEIVVVLSQLGGS 256
MG+GKTIQA+ +ATC + WP+LI+TPSSLRL+W I +W+ I I+++ Q
Sbjct: 1 MGVGKTIQALGLATCLQQKWPLLIITPSSLRLNWKLEIMEWIKFIKECNILIIDKQTSKF 60
Query: 257 NRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKR 316
IV IISY++ + N L + FKI IADE+H+LKN QA+R
Sbjct: 61 YEENIKIV---------------IISYELCKQYNNYLKT--FKIAIADEAHYLKNYQAQR 103
Query: 317 TAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFG 374
+ +PI++ + +LL+GTPAL++P EL+ L + PD++K + RYC K F
Sbjct: 104 SQLLIPILQNMHHIILLTGTPALAKPKELYNLLSIIRPDIFKFPKSFLERYCDPKPNPFY 163
Query: 375 ----IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF 430
Y+GASN +ELH ++K MIRRLK+DVL +LP+KRR++V + K M A+
Sbjct: 164 ENKIDYEGASNCDELHFILKNNFMIRRLKQDVLTELPLKRRRKVVVKTDIKKMDWTPAIM 223
Query: 431 RELE 434
++ E
Sbjct: 224 QQAE 227
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGH-E 622
++ WTP + QAEDRAHR+GQ+ V +YL+ +T+D ++D + K + ++DG
Sbjct: 215 KMDWTPAIMQQAEDRAHRVGQIGCVECFYLIGENTLDQYIYDKLNRKSNIVQSIIDGQSS 274
Query: 623 NSLEVSSSQIRSSPAKQKTLD--SFLKRCNNVDDSEHQQKLKYRK 665
N+ + + +S+ ++K ++ S +++ +D E+ K KYRK
Sbjct: 275 NNFSLQQLEFQSNQKQEKIIENKSTVQKKKFID--EYFDKFKYRK 317
>gi|193084056|gb|ACF09729.1| helicase SNF2/RAD54 family [uncultured marine crenarchaeote
KM3-86-C1]
Length = 569
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 227/462 (49%), Gaps = 25/462 (5%)
Query: 172 SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHW 231
KLL FQ+ G+ F L+ G LLAD+MGLGKT+Q +A + PVL++ P +W
Sbjct: 107 GKLLNFQKMGLDFLLKSSGNALLADDMGLGKTVQTLAYIASEKQSSPVLVVAPLVTLTNW 166
Query: 232 AAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQN 291
I++++ +V + T + S + I D F +I+Y+++ K Q
Sbjct: 167 QREIERFMKKKSRNGRIVEDGV-----PTITSIRSGKHKEIS-DYDFYLINYELLYKRQI 220
Query: 292 ILMSSNFKIVIADESHFLKNAQAKRTAAT--LPIIKKAQYALLLSGTPALSRPIELFKQL 349
L + ++ DE L++ K+ A L +K +Y + LSGTP + E++ +
Sbjct: 221 DLSKLKIRTLVCDEVQHLRSKTTKKYRAIKKLAGMKSIKYRVGLSGTPIYNHGSEIWPIV 280
Query: 350 EALYPDVYKNVHEYGNRYC----KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
+ L P + N E+ +C +G + S + L ++++ VM+RR K DVL +
Sbjct: 281 DILKPGLLGNFKEFCEYFCYQDERGRAIVV---PSKRDGLRHVLQRDVMLRRKKSDVLKE 337
Query: 406 LPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKF-TEKNLINKIY 464
L K R + +D E + EL + K++ + E + K + + I
Sbjct: 338 LKDKVRYKETIDADETYYKN------ELNKIWSKLEEEQKHAETEFSKVASYQRAIQSER 391
Query: 465 TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPAS 524
+ AK+ V+D+++ ++E ++F HH+ + +H+ ++ + I GG
Sbjct: 392 QAAGVAKLHHVIDFVKNIMEIEESVVVFCHHKYIHKLLHESL--QEFNPAAIIGGQSDKV 449
Query: 525 RQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQ 584
RQ + FQ K ++ ++AG +G+ LT A VIFAEL W+P QAEDR HRIGQ
Sbjct: 450 RQENIDNFQN-GGTKLIIVGLRAGNLGINLTRAKYVIFAELDWSPAIHRQAEDRLHRIGQ 508
Query: 585 VSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
++V YYL+ T+D+ V +++ K + ++D ++ E
Sbjct: 509 KNTVFAYYLIGKRTLDEHVANILVDKSYEIDAIMDESHDAYE 550
>gi|312374467|gb|EFR22018.1| hypothetical protein AND_15887 [Anopheles darlingi]
Length = 606
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 173/335 (51%), Gaps = 24/335 (7%)
Query: 86 IAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPL 145
IA Y ++ F++IP + K W+F + S L+ ++ NV I +
Sbjct: 120 IADTNGYHEQMIEEFKQIPSQPASKK---WSFELKDYSLLLTRLTPLNP-NVVICPIPSF 175
Query: 146 VQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQ 205
V R +S + I + S LL FQ++GV FA+ GR L+ADEMGLGKT Q
Sbjct: 176 VMREFSSGPKPKPSHVCLNAIDPSLVSSLLKFQKEGVAFAIDKSGRALIADEMGLGKTYQ 235
Query: 206 AIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVS 265
AIAVA ++ WP+LI T ++ R WA +Q L P++ ++VL
Sbjct: 236 AIAVADFYQQDWPLLICTTATTRDSWAVKFRQLLPHIPAQRIMVL--------------- 280
Query: 266 SNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK 325
N ++ D I SY ++ + + L F ++I DESH LKN +AK T + + K
Sbjct: 281 -NNGQDFIGDCRVLISSYSLMERCGDKLQDRGFGMLIFDESHTLKNFKAKCTNVAMALSK 339
Query: 326 KAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG--GVFGI-YQGASNH 382
KA+ +LLSGTPALSRP+ELF QL+ L + EY RYC G FG G SN
Sbjct: 340 KARRVILLSGTPALSRPVELFTQLQML-DSRFCTFKEYSTRYCAGKQSSFGWDASGQSNL 398
Query: 383 EELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLD 417
EL+ L+ M+RR K +V+++L K R+ V LD
Sbjct: 399 AELNILLARKFMVRRTKDEVMSELTEKNRETVILD 433
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 15/90 (16%)
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIR 633
QAE RAHRIGQ+ +V V YLLA+ T DDI+W +++ K + L +V +E+ + S+ Q
Sbjct: 472 QAESRAHRIGQMDNVTVRYLLAHKTADDIIWAMLQRKQDILTKVGLCNEDFSDASNVQAL 531
Query: 634 S-------------SPAKQKT--LDSFLKR 648
S SPA++ LD F++R
Sbjct: 532 SDAGSILPYLNESVSPARKSIGPLDQFIQR 561
>gi|219116554|ref|XP_002179072.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409839|gb|EEC49770.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 822
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 155/294 (52%), Gaps = 23/294 (7%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + L PFQR GV F L+ GR L+AD+MGLGKT+Q IA + +R WP+L+L
Sbjct: 434 DGVPRGLAKALAPFQRGGVDFVLEKDGRALIADDMGLGKTMQGIASMSVYRHEWPLLVLC 493
Query: 224 PSSLRLHWAAMIQQWLNIPP-----SEIVVVLSQLGGSNRSGFT-----IVSSNTKRNIP 273
PS R HW + WL + SE + GG + T +++S IP
Sbjct: 494 PSGARYHWESEFHYWLGVDSAINKRSEDDAENEEAGGIDEDLLTSSEIHVLTSGKDEVIP 553
Query: 274 LDGLFNII-SYDV--VLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
+I SY + VL L F+ I DESH LKN AKRTA +P++
Sbjct: 554 HKWTKVVICSYGLAPVLVDTGKLFPGQFRCAIVDESHMLKNKNAKRTALLMPVLNATDRC 613
Query: 331 LLLSGTPALSRPIELFKQLEALYPDV---YKNVHEYGNRYCKGGVFGIYQGASNHEELHN 387
+LLSGTPALSRP+EL+ QL L + + + E+ +Y K G G ELH
Sbjct: 614 VLLSGTPALSRPLELWPQLFILGTEQHGWWNSEAEFIEKYVKKG------GPRLKAELHT 667
Query: 388 LMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFRELEVVKGKI 440
L+ +TVMIRRLK D+L LPVK R++ + V ++ R+ + L +L KG +
Sbjct: 668 LLTSTVMIRRLKIDILKSLPVKIREKAEIHVLHEEQRKEFMQLLLDLRQGKGAL 721
>gi|298376514|ref|ZP_06986469.1| zinc finger Ran-binding domain-containing protein 3 [Bacteroides
sp. 3_1_19]
gi|298266392|gb|EFI08050.1| zinc finger Ran-binding domain-containing protein 3 [Bacteroides
sp. 3_1_19]
Length = 563
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 226/467 (48%), Gaps = 47/467 (10%)
Query: 176 PFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMI 235
P+Q G+ LQ R + D+MGLGKT+++IA D +P L++ P++++++W
Sbjct: 105 PYQLQGIARGLQLK-RFINGDDMGLGKTLESIATIN-KADAFPCLVICPNTVKINWQ--- 159
Query: 236 QQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK------- 288
++W + +V L S R+ + ++ +F I++Y+ + K
Sbjct: 160 REWHKFTDKKAMV----LTDSVRTSWPFFWQT-----GMNHVF-IVNYESLRKYFVRRIN 209
Query: 289 ------LQNILMSSN---FKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
L+++ + FK VI DESH +K+ +++ I ++ +LL+GTP +
Sbjct: 210 KSEKWTLKDVEFHNTIKLFKSVIIDESHKVKSTATQQSKFCKGITAGKEWIILLTGTPVV 269
Query: 340 SRPIELFKQLEALYPDVYKNV---HEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIR 396
++P +L QL + D ++ + +RYC G GASN +EL+ ++ R
Sbjct: 270 NKPNDLICQLAIM--DRMNDLGGWKYFTSRYCSGP-----HGASNLKELNFMLWKHCFFR 322
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTE 456
R K VL QLP K RQ V ++ + ++ R+L + K E+ +SLK
Sbjct: 323 REKSKVLTQLPDKVRQIVTCEITNR--KEYQDAERDLVDYLRRYKEADDEKVQKSLKGEV 380
Query: 457 KNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRI 516
I + +A K+ V+D+++ E G K ++F + ++D + Q F + +
Sbjct: 381 MVRIGILKDITARGKLREVIDFVKDFRENGKKIILFCNLHEIVDRLLQAF----PSAVCV 436
Query: 517 DGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAE 576
G +QA + FQ + S+KA G+TLTA+S V F EL WT D QAE
Sbjct: 437 TGRQDMQQKQAAIDAFQRNPKTDVIICSIKAAAAGITLTASSNVAFIELPWTYADCDQAE 496
Query: 577 DRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
RAHRIGQ SVN YYLL T+D ++ ++ K VL +N
Sbjct: 497 SRAHRIGQKDSVNCYYLLGRKTIDQKLYRIIEEKKHISNAVLGAKDN 543
>gi|409101026|ref|ZP_11221050.1| helicase [Pedobacter agri PB92]
Length = 572
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 149/567 (26%), Positives = 265/567 (46%), Gaps = 47/567 (8%)
Query: 87 AAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLV 146
A +F P +++A +++P +W+ + W P LS + V + ++ +
Sbjct: 14 ALQFKPIPKVLAAAKELPGRSWDWNNKYWKVP---LSHKDAVADFAKRFGLDFDRQPEAK 70
Query: 147 QRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQA 206
+ + P L + P ++ L FQ GV + +Q R + D+MG+GKT QA
Sbjct: 71 NTSQFVIAPLPAL-----ETPIPLKRPLFHFQEGGVAYMMQKR-RCISGDDMGMGKTSQA 124
Query: 207 IAVATCFRD----VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGS----NR 258
IA V+P L++ PSS++++W +++ + ++ +V+ + + R
Sbjct: 125 IAALHGLHAQGEAVYPALVVCPSSVKINWQ---REFATVSGAKAIVLTDSIKNTFPEYYR 181
Query: 259 SGFT---IVSSNTKRNIPLD-----GLFNIISYDVVLKLQNILMSSN----FKIVIADES 306
+G IV+ + + +D G+ L +++ FK V+ADE+
Sbjct: 182 AGMAQIFIVNYESLKKYFVDHIDDPGINEETGKKKKLTIKHFHFKEKYLNFFKTVVADEA 241
Query: 307 HFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEAL-YPDVYKNVHEYGN 365
H LK+ T I + LLL+GTP +++P +L L + + +
Sbjct: 242 HRLKSLATITTKIVKGISSGKENILLLTGTPVINKPQDLVALLGIMDHMKTLGGYQHFMK 301
Query: 366 RYCKGGVFGIYQGASNHEELHNLMKATVMIRRLK--KDVLAQLPVKRRQQVFLDVAEKDM 423
YC G + ASN EL+ + RR K KD++ LP K RQ++ ++ K+
Sbjct: 302 HYCGGP-----REASNLLELNYNLNKHCFYRRNKTDKDIIQDLPDKMRQKIICQLS-KEA 355
Query: 424 RQIYALFRE-LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETV 482
R+ Y R+ + K K + E +S+ I + SA K+ V D++
Sbjct: 356 RKEYNDARDNVAAYLAKYKNSTTHEIEKSMNAEVLMQIGVLKNISARGKLKDVFDFIHDT 415
Query: 483 IEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAV 542
+++G K ++FA ++ A+ + F H +RI G +QA + FQ+ ++K V
Sbjct: 416 LDSGQKLVVFASLTEIIAAVQKEF----PHSVRITGQDDTNQKQAAIDRFQQDPEMKLIV 471
Query: 543 LSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDI 602
++KA GVG+TLTAAS V F E W + QAEDR RIGQ ++V Y L DT+D+
Sbjct: 472 CNLKAAGVGVTLTAASNVAFIEQGWHSAIMDQAEDRCFRIGQKNNVMCTYFLGEDTIDED 531
Query: 603 VWDVVRSKLENLGQVLDGHENSLEVSS 629
++D+++ K E + + G + E ++
Sbjct: 532 IYDLIQEKRE-IANTVSGAVDEFETTT 557
>gi|14548140|gb|AAK66797.1|U40238_20 SWI/SNF family helicase [uncultured crenarchaeote 4B7]
Length = 570
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 221/464 (47%), Gaps = 33/464 (7%)
Query: 174 LLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAA 233
LL FQR+G+ F ++ G LLADEMGLGKT+Q +A + ++ +P LI+ P +W
Sbjct: 109 LLDFQREGLDFLIKSSGNALLADEMGLGKTVQTLAYLSKEKNSFPALIIAPLVTLTNWQR 168
Query: 234 MIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL----FNIISYDVVLKL 289
IQ++L ++ + SS RN L + F II+Y+++ K
Sbjct: 169 EIQKFLKKKGKNGKIIED----------GVPSSTMIRNGKLADIDEYDFYIINYELLNKR 218
Query: 290 QNILMSSNFKIVIADESHFLKNAQAKRTAAT--LPIIKKAQYALLLSGTPALSRPIELFK 347
L++ + ++ DE L++ ++ AA L + +Y + LSGTP +R E++
Sbjct: 219 LPDLLNLGIRSLVCDEVQHLRSKTTQKYAAVKELAAAESVKYRVGLSGTPIYNRGSEIWP 278
Query: 348 QLEALYPDVYKNVHEYGNRYC----KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVL 403
++ L P + + E+ +C KG + + + L N + VM+RR K DVL
Sbjct: 279 IVDILKPGLLGSFKEFCEYFCYVNEKGKAIVL---ENKRDTLRNQLTKHVMLRRKKSDVL 335
Query: 404 AQLPVKRRQQVFLDVAEKDMR-QIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINK 462
+L K R + EK + ++ ++++LE + K E + I
Sbjct: 336 KELKDKVRYPEMIHADEKFYKAELSKIWKKLE------EEQKYAESAFDKSASYHRAIES 389
Query: 463 IYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPP 522
+ AK+ V +++ ++E ++F HH+ + +H I GG
Sbjct: 390 ERQAAGLAKLSHVTNFVTNIMEIEESVVVFCHHKAIHSLLHHSL--SDYDPASIIGGQTD 447
Query: 523 ASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
RQ + FQ K K + ++AG VG+ LT A VIFAEL W+P QAEDR HRI
Sbjct: 448 VVRQREIDRFQ-KGQTKLMIAGLRAGNVGINLTTAKYVIFAELDWSPAIHRQAEDRLHRI 506
Query: 583 GQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
GQ ++V YYL+ T+D+ V +++ K + +LD S E
Sbjct: 507 GQKNTVFAYYLVGKGTLDEHVAEILVDKSYEIDTILDKQGESFE 550
>gi|432103390|gb|ELK30495.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 [Myotis davidii]
Length = 662
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 126/211 (59%), Gaps = 32/211 (15%)
Query: 172 SKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHW 231
S LLPFQR GV FA+ GGR+LLAD+MGLGKTIQAI +A +R WP+L++ PSS+R W
Sbjct: 452 SSLLPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTW 511
Query: 232 AAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQ 290
QWL ++ P I VV++ G +R GL NI+S+D++ KL+
Sbjct: 512 EQAFLQWLPSLNPELINVVVT---GKDRL--------------TTGLVNIVSFDLLSKLE 554
Query: 291 NILMSSNFKIVI-------------ADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
L + FK+VI DESHFLKN + R A +P++K A+ +LLSGTP
Sbjct: 555 KQL-KTPFKVVIIDVTLFTYVTVSFQDESHFLKNIKTARCRAAMPLLKMAKRVILLSGTP 613
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
A+SRP EL+ Q+ A+ P + H +G RYC
Sbjct: 614 AMSRPAELYTQIIAVKPTFFPQFHAFGLRYC 644
>gi|403336465|gb|EJY67431.1| DNA helicase, putative [Oxytricha trifallax]
Length = 2270
Score = 171 bits (432), Expect = 2e-39, Method: Composition-based stats.
Identities = 125/486 (25%), Positives = 226/486 (46%), Gaps = 76/486 (15%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
+P + L +Q++ V ++ GR ++ DEMGLGKT++++AVA + D WP+L++ PS
Sbjct: 291 LPPSMRDNLFEYQKNSVILGVKQQGRFMILDEMGLGKTLESLAVAMVYFDEWPLLVVCPS 350
Query: 226 SLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
++ HW I +W+ + PS+I V+ R G + N+K I
Sbjct: 351 QMKNHWREEILKWIPDFDPSQITVM--------RKGREAFNDNSKVFI------------ 390
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
+++KI +S K Q+ + PI+ K + +L S P + +P
Sbjct: 391 -----------TSYKIAARQQSQIQKRFQSPVSRILCPILSKMKRLVLTSSAPLMEKPQH 439
Query: 345 LFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLA 404
L+ + PD++++ E+ +RYC G G N E+H ++ ++ R KKDV
Sbjct: 440 LYNLFNMIRPDIFQDQMEFISRYCFSRD-GQILGPQNQREMHFILDNKIISTRKKKDVAH 498
Query: 405 QLPVKRRQQVFLDVAEKDMRQI-------------YALFRELEVVKGK------IKACKS 445
+P +Q++ + +M++I LF +L+ ++ + I CK
Sbjct: 499 DMPPILKQKLHIKCDLNEMQEIRVILNGRMLSESMQTLFVQLKNIEKEAQRITEIIKCKM 558
Query: 446 EEEVQS----------LKFTEKN--LINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFA 493
+ S L +K+ LI++++ S++A+I +L + ++E K ++ A
Sbjct: 559 DRMSTSANNYNDVGNLLGSNQKDDQLIDQLFEVSSQARIKGILKTVSQILENEQKVIVIA 618
Query: 494 HHQPMLDAIHQLFLK----------KKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVL 543
++ I K + IRID TP +Q ++ FQE +K +L
Sbjct: 619 QQNQSIEEIENTVRKVFDDQREKNESNYNYIRIDNNTPSDLKQQMIRNFQENPIIKVVIL 678
Query: 544 SMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDR-AHRIGQ-VSSVNVYYLLANDTVDD 601
S+ + LT+AS +IFAE W + QA R A + Q +NVYYL A D++D+
Sbjct: 679 SLATSSLASVLTSASNIIFAETYWNNEQMAQAIFRDARSLNQDQQCLNVYYLYAKDSLDE 738
Query: 602 IVWDVV 607
I++ ++
Sbjct: 739 IIFQIM 744
>gi|157134957|ref|XP_001663375.1| hypothetical protein AaeL_AAEL013189 [Aedes aegypti]
gi|108870352|gb|EAT34577.1| AAEL013189-PA [Aedes aegypti]
Length = 1904
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 152/537 (28%), Positives = 244/537 (45%), Gaps = 101/537 (18%)
Query: 165 QIPAHIESKLLPFQRDGVR---FALQHGGRILLADEMGLGKTIQAIAVAT---------- 211
+IP I + L +Q+ GV F ++ +L D+MGLGKT+QAI +
Sbjct: 1310 KIPVEINADLRSYQQSGVNWLWFLNKYKLHGILCDDMGLGKTLQAICILAGDHHQRSLDP 1369
Query: 212 -CFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKR 270
C + P L++ P +L HW ++++L P+ + L +G
Sbjct: 1370 KCAK--LPSLVICPPTLTGHWVYEVEKFL---PTRFLRPLHYVG---------------- 1408
Query: 271 NIPLD--------GLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAAT 320
+P+D G +N+I SY++V K S ++ + DE H +KN + K + A
Sbjct: 1409 -LPVDRERLRHKLGTYNLIIASYEIVRKDIEFFSSVHWNYCVLDEGHIIKNGRTKSSKAI 1467
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC---------KGG 371
++ A + L+LSGTP + +EL+ + L P ++ R+ K
Sbjct: 1468 KQLV--ANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFSTRFSRPILASRDPKSS 1525
Query: 372 VFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF- 430
GA E LH + ++RR+K+DVL LP K Q + +++ R +Y F
Sbjct: 1526 AKEQEAGALAMEALHRQV-LPFLLRRVKEDVLTDLPPKITQDLLCELSPLQER-LYEDFS 1583
Query: 431 --------RE-LEVVKGKIKACKSEEEVQSLKFTE-----------------KNLINKIY 464
RE LE + G+I K Q+L++ + + ++++I
Sbjct: 1584 RMHLNSDIRECLENIDGQI-VSKKTHVFQALRYLQNVCNHPKLVLQPSHPEYQTILSEIS 1642
Query: 465 T-DSAE--AKIPAVLDYL--------ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKK--- 510
+ D E AK+PA+ L E + + LIF + MLD I LKK
Sbjct: 1643 SMDDIEHSAKLPALKQLLLDCGIGTNEDMSVNQHRALIFCQLKAMLDIIENDLLKKHLPA 1702
Query: 511 VHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPG 570
V +R+DG PP+SR +VT+F + +L+ + GG+GL LT A TVIF E W P
Sbjct: 1703 VSYLRLDGSVPPSSRHQIVTKFNGDPSIDVLLLTTQVGGLGLNLTGADTVIFVEHDWNPM 1762
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
+QA DRAHRIGQ VNVY L+ ++++ + + + KL V+ S+E
Sbjct: 1763 KDLQAMDRAHRIGQKKVVNVYRLITRKSLEEKIMGLQKFKLLTANTVVSDENASMET 1819
>gi|357610923|gb|EHJ67216.1| putative TATA-binding protein-associated factor 172 [Danaus
plexippus]
Length = 1868
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/519 (27%), Positives = 232/519 (44%), Gaps = 69/519 (13%)
Query: 165 QIPAHIESKLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIAV--------ATCF 213
+IP + ++L +Q+ GV RF ++ +L D+MGLGKT+Q++ V A
Sbjct: 1305 KIPIPVTAELRSYQQAGVNWLRFLNEYKLHGVLCDDMGLGKTLQSVVVVAGSHYERAQSG 1364
Query: 214 RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P L++ P +L HW + +++ P + + L +G + + +P
Sbjct: 1365 APQMPSLVVCPPTLTGHWVFEVTKFI---PCQYLKPLPYVGPP------VERERLRAQVP 1415
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
L + SYD+V K + + I DE H +KN + K A I+ A + L+L
Sbjct: 1416 FYNLI-VASYDIVRKDIDFFSGIKWNYCILDEGHVIKNGKTKAFKAIKQIV--ANHRLIL 1472
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCK---------GGVFGIYQGASNHEE 384
SGTP + +EL+ + L P + + ++ RY + + GA E
Sbjct: 1473 SGTPIQNNVLELWSLFDFLMPGLLGSERQFTARYSRPLLAARDPRASPHHLQAGALACEA 1532
Query: 385 LHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR-------------------Q 425
LH + ++RR+K+DVL +LP K Q + D++ R
Sbjct: 1533 LHRQV-LPFLLRRVKEDVLRELPPKITQDYYCDLSPLQRRLYEHFSKEHMPQEATHSHTH 1591
Query: 426 IYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAE--AKIPAVLDYL---- 479
++ L+ V K E ++ + T++ D + AK+PA+ L
Sbjct: 1592 VFQALHYLQNVCNHPKLVLVESHPETNRVTQQLAAAGSSLDDIQHGAKLPALKQLLLDCG 1651
Query: 480 --------ETVIEAGCKFLIFAHHQPMLDAIHQLFLKK---KVHCIRIDGGTPPASRQAL 528
E+ + + + LIF + MLD + + ++K V +R+DG PP R A+
Sbjct: 1652 IGSASTGDESAVVSQHRALIFCQLKKMLDIVEKDLIQKHLPSVSYLRLDGSVPPHQRHAI 1711
Query: 529 VTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSV 588
VT F + +L+ GG+GL LT A TVIF E W P +QA DRAHRIGQ V
Sbjct: 1712 VTRFNTDVSIDVLLLTTAVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVV 1771
Query: 589 NVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
NVY L+ DT+++ + + + KL V+ +LE
Sbjct: 1772 NVYRLITRDTLEEKIMGLQKFKLMTANTVISSENAALET 1810
>gi|357629862|gb|EHJ78380.1| hypothetical protein KGM_21178 [Danaus plexippus]
Length = 402
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 174/317 (54%), Gaps = 23/317 (7%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIA 151
+ P L++ F+ + ++++ +LW F +S E ++S+++ I + PL +
Sbjct: 97 FCPPLINIFKTLRSRSYDSNTKLWNF---LMSDYENLMSKVTPLAPHIV-IGPLPAFVLK 152
Query: 152 SASAAPDLREKYDQIP--AHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAV 209
+ P D P A + +KLLPFQ +GVRF + GR L+AD+MGLGKT QA+A+
Sbjct: 153 ILNDPPIDHSAVDLTPIEATLRNKLLPFQEEGVRFGIARKGRCLIADDMGLGKTFQALAI 212
Query: 210 ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTK 269
A+ +R WP+LI+T SS+R W I + L PS +V ++ L + F +
Sbjct: 213 ASYYRHDWPLLIVTTSSMRETWQNKISELL---PSVPLVNVATLTSNKDVNFV-----SD 264
Query: 270 RNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQY 329
R + + I+SY ++ +L F VI DESH LK+ +A+ T+A + + +
Sbjct: 265 RQVEVV----IVSYKIISLHTELLRQKRFGFVIVDESHHLKSPKAQCTSALFKLCGQGR- 319
Query: 330 ALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELH 386
A+LLSGTPALSRP+EL+ QL L P ++ EYG RYC K FG G SN EL
Sbjct: 320 AVLLSGTPALSRPVELYTQLSLLEPRLFTYT-EYGKRYCDAKQTNFGWDMTGKSNLAELL 378
Query: 387 NLMKATVMIRRLKKDVL 403
+++ +IRR K+ VL
Sbjct: 379 VILQRRFLIRRTKEQVL 395
>gi|324500954|gb|ADY40432.1| Chromatin-remodeling complex ATPase chain isw-1 [Ascaris suum]
Length = 1053
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 139/479 (29%), Positives = 236/479 (49%), Gaps = 49/479 (10%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRD-- 215
++++ P +IE+ ++ +Q G+ + +LQH G +LADEMGLGKT+Q IA+ +
Sbjct: 141 RFEKTPFYIENGEMRDYQIRGLNWLISLQHNGINGILADEMGLGKTLQTIAMLGFMKHYK 200
Query: 216 --VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P L++TP S +W ++W PS + L G+ + R++
Sbjct: 201 NAAGPHLVITPKSTLQNWLNEFEKWC---PSLKAIALI--------GYAEARAELIRDVI 249
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
L G ++++ SY++VL+ +++L +K ++ DE+H +KN +K + K++ L
Sbjct: 250 LPGGWDVLVTSYEMVLREKSLLRKYVWKFLVIDEAHRIKNENSKLSEIVREF--KSKNRL 307
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PD++ ++ + + + G S LH ++K
Sbjct: 308 LITGTPLQNNLHELWALLNFLLPDMFALASDFDSWFTTNEMMGNQNLVSR---LHQVLKP 364
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK DV L K+ ++++ ++ K R+ Y L ++++VV G K K+ +
Sbjct: 365 -FLLRRLKSDVETTLLPKKEVKIYVGLS-KMQREWYTKILLKDIDVVNGAGKLEKAR--I 420
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFA 493
++ + N Y D AE P D L+ + E G + LIF+
Sbjct: 421 MNILMHLRKCCNHPYLFDGAEPGPPYTTDQHLVDNAGKMVLLDKLLKKLKEQGSRVLIFS 480
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + + R+DG T A RQ + EF D K +L+ +AGG+G+
Sbjct: 481 QMSRMLDLLEDYCWWRNYQYCRLDGQTAHADRQMSIDEFNRPDSEKFIFMLTTRAGGLGI 540
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
LTAA VI + W P +QA DRAHRIGQ V V+ + TVD+ + + KL
Sbjct: 541 NLTAADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITESTVDERIIERAEMKL 599
>gi|326678434|ref|XP_003201057.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3,
partial [Danio rerio]
Length = 270
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/287 (38%), Positives = 162/287 (56%), Gaps = 28/287 (9%)
Query: 193 LLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLS 251
++ADEMGLGKTIQAI+VA F+ WP+LI+ PSSL+ W +++W+ + P +I +V S
Sbjct: 4 MIADEMGLGKTIQAISVAYIFKQEWPLLIVVPSSLKYPWIEELEKWIPELDPRDINLVES 63
Query: 252 QLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKN 311
+ T+ S +K I GL + L L F +V+ DESH+LK+
Sbjct: 64 KTD-------TMSISTSKVTILGYGLLTTDAR----ALLEALNKQQFAVVLVDESHYLKS 112
Query: 312 AQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGG 371
A R+ +PII+ A+ A+LL+GTPAL RP ELF Q++ALYP + +Y N+YC
Sbjct: 113 RNAARSKILVPIIQSAKRAILLTGTPALGRPEELFMQIDALYPRRFGTWSDYANKYCNAH 172
Query: 372 --VFGI-----YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR 424
FG +GAS+ +ELH + + +MIRRLK VL QLP K RQ++ D+ + +
Sbjct: 173 YRYFGARRQWDCRGASHLDELHKRL-SEIMIRRLKNQVLTQLPPKIRQRIPFDLPKDAAK 231
Query: 425 QIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAK 471
+ A F + E K SE E Q ++ +LI +Y +A AK
Sbjct: 232 EASASFEQWE------KLMSSESENQFVEVM--SLITHMYKQTAVAK 270
>gi|410726738|ref|ZP_11364973.1| DNA/RNA helicase, superfamily II, SNF2 family [Clostridium sp.
Maddingley MBC34-26]
gi|410600191|gb|EKQ54723.1| DNA/RNA helicase, superfamily II, SNF2 family [Clostridium sp.
Maddingley MBC34-26]
Length = 1085
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 149/504 (29%), Positives = 234/504 (46%), Gaps = 69/504 (13%)
Query: 166 IPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
+P ++++L +Q G ++ L GG +LADEMGLGKT+Q IA D +
Sbjct: 626 MPDKLKTQLRDYQITGFKWFKNLSYLGFGG--ILADEMGLGKTVQTIAFLLS-EDGKKSI 682
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
I+ P+SL +W +++ PS + V+ G N + NI
Sbjct: 683 IIAPTSLVYNWK---NEFIKFAPSMKIGVVH--GNKNERANVVE--------------NI 723
Query: 281 ISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
YDV+L L + +F I DE +KN AK T I KA+ +L
Sbjct: 724 NKYDVLLTTYGTLRNDEENYENLHFDYCILDEGQNIKNPLAKSTKCVKNI--KAKSKFVL 781
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV 393
+GTP + IEL+ + + P+ N + ++ I EL ++
Sbjct: 782 TGTPIENNLIELWSIFDFIMPNYLYNPTFFKKKFIDNDNSAI--------ELQKFIRP-F 832
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
M+RRLKKDV+ +LP K + ++++ K R++YA + VK IKA +E K
Sbjct: 833 MLRRLKKDVIKELPDKIEKNYYVELT-KQQRKVYATY-----VKD-IKAKMEDESFGGDK 885
Query: 454 FTEKNLINK---------IYTD---SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDA 501
T + + K I D AKI L +E IE G K L+F+ +L
Sbjct: 886 ITIFSYLTKLRQLCLDPSIVVDKYAGGSAKIEEALKLIEENIENGHKILLFSQFTSVLSN 945
Query: 502 IHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVI 561
I K K+ + +DG T R LV EF + + K ++S+KAGG GL LT+A +I
Sbjct: 946 ISDELSKNKIEHMYLDGSTKADKRLELVEEFNKSNKCKVFLISLKAGGTGLNLTSADVII 1005
Query: 562 FAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGH 621
+ W P QA DRAHRIGQ + V V+ L++ T+++ + ++ SK E + VLD
Sbjct: 1006 HFDPWWNPAVEDQATDRAHRIGQKNVVQVFKLISEGTIEERIINLQDSKKELISDVLDS- 1064
Query: 622 ENSLEVSSSQIRSSPAKQKTLDSF 645
+ S + S+ +K++ ++ F
Sbjct: 1065 ----DYKSENMLSALSKEELMELF 1084
>gi|391347377|ref|XP_003747940.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Metaseiulus occidentalis]
Length = 1049
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 242/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
IA++S ++D+ P +I +L +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 145 IANSSTQEVACVRFDESPKYITGGELRDYQIRGLNWMISLYENGINGILADEMGLGKTLQ 204
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ FR++ P ++L P S +W A ++W PS V+L G +
Sbjct: 205 TISLLGYMKHFRNINGPHMVLVPKSTLANWEAEFERWC---PSLRTVILI---GDQEARN 258
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
T++ R++ + ++++ SY++V++ + +L N++ ++ DE+H +KN ++K +
Sbjct: 259 TLI-----RDVVMQEKWDVLITSYEMVIREKGVLKKFNWRYLVIDEAHRIKNEKSKLSEI 313
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + VFG
Sbjct: 314 VREF--KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFSTNSVFGDQDLV 371
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVK 437
E LH +++ ++RRLK +V +LP K+ ++++ ++ K R+ Y L ++++VV
Sbjct: 372 ---ERLHAVLRP-FLLRRLKSEVEKKLPPKKEVKIYVGLS-KMQREWYTKCLMKDIDVVN 426
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLET 481
G K K + ++ + N Y D AE P D L
Sbjct: 427 GAGKVDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVVLDKLLPR 484
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ MLD + + R+DG TP R + E+ K
Sbjct: 485 LKEQGSRVLIFSQMTRMLDILEDYCYWRNWQYCRLDGQTPHEDRTKSIIEYNRPGSEKFV 544
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ+ V V+ + +T++
Sbjct: 545 FMLSTRAGGLGINLYTADIVILFDSDWNPQADLQAMDRAHRIGQLKPVKVFRFVTENTIE 604
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 605 ERIVEKAEVKL 615
>gi|427782997|gb|JAA56950.1| Putative chromatin remodeling complex swi/snf component swi2
[Rhipicephalus pulchellus]
Length = 1022
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 241/481 (50%), Gaps = 53/481 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAV---ATCFR 214
+++ P +I+ +L +Q G+ + + +HG +LADEMGLGKT+Q I++ +R
Sbjct: 134 RFETSPTYIKGGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTLQTISLLGYMKHYR 193
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
++ P +++ P S +W + ++W PS V L +G N I R+
Sbjct: 194 NINGPHMVIVPKSTLANWMSEFERWC---PSLRTVCL--IGDQNARAALI------RDTL 242
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
+ G +++ SY++V++ + +L N++ ++ DE+H +KN ++K + K L
Sbjct: 243 MPGEWDVCVTSYEMVIREKAVLKKFNWRYLVIDEAHRIKNEKSKLSEIVREF--KTTNRL 300
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNH--EELHNLM 389
LL+GTP + EL+ L L PDV+ + ++ + G NH E LH ++
Sbjct: 301 LLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDAWFNTNNCLG-----DNHLVERLHAVL 355
Query: 390 KATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKIKACKSEE 447
+ ++RRLK +V +LP K+ ++++ ++ K R+ Y L ++++VV G K K
Sbjct: 356 RP-FLLRRLKSEVEKKLPPKKEVKIYVGLS-KMQREWYTKCLLKDIDVVNGAGKVDKMR- 412
Query: 448 EVQSLKFTEKNLINKIYT-DSAEAKIP--------------AVLDYLETVIEA-GCKFLI 491
+ ++ + N Y D AE P +LD L ++A G + LI
Sbjct: 413 -LLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVYNCGKMVILDKLLPKLKAQGSRVLI 471
Query: 492 FAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGV 550
F+ MLD + L ++ R+DG TP R + EF + + K +LS +AGG+
Sbjct: 472 FSQMTRMLDILEDYCLWRRYGYCRLDGQTPHEERTLSINEFNKPNSDKFLFMLSTRAGGL 531
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
G+ L A VI + W P +QA DRAHRIGQ +V V+ ++ +TV++ + + K
Sbjct: 532 GINLATADVVILFDSDWNPQVDLQAMDRAHRIGQTKAVRVFRMITENTVEERIVERAEVK 591
Query: 611 L 611
L
Sbjct: 592 L 592
>gi|392548557|ref|ZP_10295694.1| hypothetical protein PrubA2_19377 [Pseudoalteromonas rubra ATCC
29570]
Length = 1411
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 238/478 (49%), Gaps = 29/478 (6%)
Query: 166 IPAHIESKLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
+P ++++L +Q G +A++ GG LAD+MGLGKT+QA+AV P LI+
Sbjct: 936 VPPTLQAQLRDYQLAGFDWAMRLAHWGGGACLADDMGLGKTLQALAVILARASEGPALII 995
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+S+ +W Q+ P+ + + S ++ + + P D + +IS
Sbjct: 996 APTSVCFNWQ---QEASKFAPALNMTLFSDHSNAHEREQLLTQAG-----PFDCV--VIS 1045
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
Y ++ + +L + ++ +IADE+ LKN AKRT A + K ++ ++ +GTP +
Sbjct: 1046 YGLLQRQAELLKAKHWHTIIADEAQALKNPLAKRTVAACAL--KGEFKMITTGTPIENNL 1103
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNH---EELHNLMKATVMIRRLK 399
EL+ + P + N+ + R+ + + + H + L L+K ++ RRLK
Sbjct: 1104 TELWSLFRFVNPGLLGNLKRFNARFAQPMENAVQDKLAAHKARQSLKQLVKPFIL-RRLK 1162
Query: 400 KDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL--EVVKGKIKACKSEEEVQSL----K 453
VL +LP K + + ++E +M AL + ++++ + +E+ ++ L K
Sbjct: 1163 SQVLTELPEKTEINLTVSLSEDEMNFYEALRQHAIDQIMESSSTSSAAEQRIRMLAELTK 1222
Query: 454 FTEKNLINKIYTDSA---EAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKK 510
+ K+ + +K+ A+ + L + + K LIF+ L I L +
Sbjct: 1223 LRQACCHPKLVMAESTLPSSKLEALSELLNELRQNNHKALIFSQFVGHLQIIKNLLEQSN 1282
Query: 511 VHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPG 570
V +DG TP A RQ V FQ + + ++S+KAGG GL LTAA VI + W P
Sbjct: 1283 VPYQYLDGSTPAAQRQERVNAFQHGNG-EVFLISLKAGGSGLNLTAADYVIHMDPWWNPA 1341
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
QA DRAHR+GQ V +Y L+A +T+++ + + + K + Q+L G+E + ++S
Sbjct: 1342 VEAQASDRAHRMGQQRPVTIYRLIAKNTIEEKIVALHQHKRDLADQLLAGNEQANKLS 1399
>gi|423345321|ref|ZP_17323010.1| hypothetical protein HMPREF1060_00682 [Parabacteroides merdae
CL03T12C32]
gi|409223107|gb|EKN16044.1| hypothetical protein HMPREF1060_00682 [Parabacteroides merdae
CL03T12C32]
Length = 564
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 147/540 (27%), Positives = 249/540 (46%), Gaps = 57/540 (10%)
Query: 108 WNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIP 167
W+ + W P AE L +++ Y + + P+ +A + D+ + ++P
Sbjct: 38 WDKQTGAWLIPATNKCKAE--LDQLTYY---VRHFEPVQWGTVAQSQTEEDVAFQIPEMP 92
Query: 168 A-----HIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
++ + P+Q G+ LQ R + D+MGLGK++++IA D +P L++
Sbjct: 93 ELDGDHGLKIQPYPYQLQGIARGLQLK-RFINGDDMGLGKSLESIATIN-KADAFPCLVI 150
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+ ++++W ++W + +V L S R + ++ +F I++
Sbjct: 151 CPNVVKINWQ---REWHKFTDKKAMV----LTDSVRDSWPFFWQT-----GMNQVF-IVN 197
Query: 283 YDVVLK-------------LQNILMSSN---FKIVIADESHFLKNAQAKRTAATLPIIKK 326
Y+ + K L+++ + FK VI DESH +K+ ++T I
Sbjct: 198 YESLRKYFVRRITKAEKWTLKDVEFHNTIKLFKSVIIDESHKVKSTATQQTKFCKGIASG 257
Query: 327 AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGN---RYCKGGVFGIYQGASNHE 383
+Y +LL+GTP +++P +L QL + D ++ + RYC G ASN +
Sbjct: 258 KEYIILLTGTPVVNKPKDLVAQLGIM--DRMIDMGGWKGFMLRYCSGP-----NQASNLK 310
Query: 384 ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC 443
EL+ + RR K VL QLP K RQ V ++ + ++ R+L + K
Sbjct: 311 ELNYKLWQHCFFRREKSKVLTQLPDKVRQIVSCEITNR--KEYMDAERDLIDYLKRYKEA 368
Query: 444 KSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
E+ +SLK I + +A K+ V+D+++ E G K ++F + ++D +
Sbjct: 369 DDEKIQKSLKGEVMVRIGILKDITARGKLKEVIDFVKDFRENGKKIILFCNLHEIVDRLM 428
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
F + + G +QA V FQ+ + S+KA G+TLTAAS V F
Sbjct: 429 IAF----PSAVCVTGRQNMQEKQASVDAFQKNPKTDVIICSIKAASAGITLTAASDVAFI 484
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
EL WT D QAE RAHRIGQ SVN YYLL T+D ++ ++ K VL +N
Sbjct: 485 ELPWTYADCDQAESRAHRIGQKDSVNCYYLLGRRTIDQKLYRIIEEKKHISNAVLGAEDN 544
>gi|449499854|ref|XP_002191591.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Taeniopygia
guttata]
Length = 1005
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 253/513 (49%), Gaps = 59/513 (11%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S ++ ++++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 107 LTESSKTTNVCTRFEESPSYVKWGKLRDYQIRGLNWLISLYENGINGILADEMGLGKTLQ 166
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W ++W +P V ++ R+ F
Sbjct: 167 TISLLGYMKHYRNIPGPHMVLVPKSTLQNWMNEFKRW--VPTLRAVCLIGD--KDQRAAF 222
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 223 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 275
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 276 VREF--KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNCLGDQKLV 333
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 334 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 388
Query: 438 --GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------L 479
GK+ + + ++ + N Y D AE P D L
Sbjct: 389 SAGKLDKMR----LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLL 444
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
+ E G + LIF+ +LD + + + R+DG TP RQA + F + D K
Sbjct: 445 PKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHNERQASINAFNDPDSSK 504
Query: 540 AA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++T
Sbjct: 505 FVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNT 564
Query: 599 VDDIVWDVVRSKLE------NLGQVLDGHENSL 625
V++ + + KL G+++D + N L
Sbjct: 565 VEERIVERAEMKLRLDSIVIQQGRLVDQNLNKL 597
>gi|154488684|ref|ZP_02029533.1| hypothetical protein BIFADO_01991 [Bifidobacterium adolescentis
L2-32]
gi|154082821|gb|EDN81866.1| SNF2 family N-terminal domain protein [Bifidobacterium adolescentis
L2-32]
Length = 1272
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 231/481 (48%), Gaps = 37/481 (7%)
Query: 165 QIPAHIESKLLPFQRDGVRFA---LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
++P +++ L P+Q +G ++ G +LADEMGLGK++Q +++ + P LI
Sbjct: 785 EVPERLKTVLRPYQVEGFQWLSTLWDKGFGGILADEMGLGKSVQLLSLIEARKGNGPSLI 844
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRN--------IP 273
+ P+SL +WAA +++ E+V + R V++ ++ N
Sbjct: 845 VCPASLVYNWAAECEKFAGDLTVEVV---AGTKAQRRKAIATVAAQSQENDGATTNGATT 901
Query: 274 LDGLFNII-SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
DG +I SYD++ + + + +F ++ DE+ ++KN K + + ++AL
Sbjct: 902 YDGTDVVITSYDLLRRDVDDYAACHFALMALDEAQYIKNHATKVAKSVKQVTADHRFAL- 960
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
+GTP +R EL+ + L P + ++ +Y + I H + + ++A
Sbjct: 961 -TGTPIENRLSELWSIFDFLMPGLLGTYTKFREKYEQP----IMAPGPEHSVMADKLQAL 1015
Query: 393 VMI---RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEV 449
V + RRLKKDVL LP K + V E + R++YA E + KA ++
Sbjct: 1016 VGLFIKRRLKKDVLTDLPDKF-ENVLTVKLEGEQRKLYAA-HEQRLRATLTKASDADFNT 1073
Query: 450 QSLK-FTEKNLINKIYTD---------SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
+ ++ E L+ +I D +A AK+ A+ + + T + G K L+F+ L
Sbjct: 1074 KKIRILAEFTLLREICCDPRLVYADAKNASAKLDAIAELVATCMGEGKKVLVFSQFTSFL 1133
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
+ I ++ V I G TP R LV EF +DV ++S+KAG GL L AS
Sbjct: 1134 ELIGARLAEQGVEYYTITGETPKKRRVELVDEFN-GNDVPVFLISLKAGNTGLNLVGASV 1192
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
V+ A+ W QA DRAHRIGQ VNVY ++A DT+++ + + K E Q D
Sbjct: 1193 VVHADPWWNAAAQNQATDRAHRIGQTQDVNVYQIVAKDTIEERILKLQEKKNELARQFTD 1252
Query: 620 G 620
G
Sbjct: 1253 G 1253
>gi|410478503|ref|YP_006766140.1| superfamily II DNA/RNA helicase [Leptospirillum ferriphilum ML-04]
gi|406773755|gb|AFS53180.1| superfamily II DNA/RNA helicase, SNF2 family [Leptospirillum
ferriphilum ML-04]
Length = 1016
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 239/491 (48%), Gaps = 55/491 (11%)
Query: 170 IESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL---ILT 223
+ +L +Q+ GV + L + G +LADEMGLGKT+ +A + D PVL I+
Sbjct: 541 FQGQLRVYQKQGVGWLLRLRERGLHGILADEMGLGKTVTTLAFLSHILDGQPVLAVLIVV 600
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+SL +W ++Q+L N+P + QL G R+ P GL + +
Sbjct: 601 PASLVYNWEKEVRQFLPNVPCTIYHGSQRQLAG--------------RDFPAHGLV-VTT 645
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK-KAQYALLLSGTPALSR 341
Y V + L F +VI DE+ +KN + + +L I + + + L LSGTP +
Sbjct: 646 YGTVRNDIDFLSERRFSMVILDEAQTIKNPE---SGISLAISRLRGDFRLALSGTPLENN 702
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNL--MKATVMIRRLK 399
++L+ L+P + + + RY +G ++Q E + L + + +++RR K
Sbjct: 703 LVDLWSLFRFLFPGLLGSRKFFEERYVQGKGSPLWQ----KERIGWLRTLVSPLVLRRTK 758
Query: 400 KDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGK--IKACKSEEEVQSLKFTEK 457
KDVLA LP K +++ E++ +RE+ +++GK I+A + + +
Sbjct: 759 KDVLADLPEKTVVDHWVEPGEEER----TAYREI-LLRGKEEIRAVSKDRKAFRMNMLAL 813
Query: 458 NLINKIYT-------DSAEAKIPAVLDYLETV------IEAGCKFLIFAHHQPMLDAIHQ 504
L +++ + +PA ++ET+ + G + L+F+ MLD +
Sbjct: 814 LLRLRLFCCHPDLVPNPKGISVPAPAKFMETLAKIREALADGHRILLFSQFTGMLDILEN 873
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQ-EKDDVKAAVLS-MKAGGVGLTLTAASTVIF 562
K + R+DG TPP RQ LV EFQ +K D + LS +KAGGVGLTLT A V
Sbjct: 874 ALRKDGILFSRLDGKTPPKERQRLVEEFQRQKPDSPSVFLSSLKAGGVGLTLTNADFVFH 933
Query: 563 AELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL-DGH 621
+ W P QA DR+HRIGQ V VY +L TV++ V + KLE V+ +G
Sbjct: 934 YDPWWNPQVENQATDRSHRIGQKRPVFVYRMLTRGTVEEKVKALKEEKLELFDLVMGEGQ 993
Query: 622 ENSLEVSSSQI 632
+ E S Q+
Sbjct: 994 PVAQEWLSRQL 1004
>gi|150017526|ref|YP_001309780.1| non-specific serine/threonine protein kinase [Clostridium
beijerinckii NCIMB 8052]
gi|149903991|gb|ABR34824.1| Non-specific serine/threonine protein kinase [Clostridium
beijerinckii NCIMB 8052]
Length = 1057
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 237/484 (48%), Gaps = 61/484 (12%)
Query: 166 IPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
+P +++++L +Q G ++ L GG +LADEMGLGKT+Q IA +D L
Sbjct: 598 MPDNLKTQLRDYQITGFKWFKNLSYLGFGG--VLADEMGLGKTVQTIAFLLSEKD-KKSL 654
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
I+ P+SL +W ++L PS + V+ G N I S I
Sbjct: 655 IIAPTSLIYNWK---NEFLKFAPSMKICVVH--GNKNERVKNIES--------------I 695
Query: 281 ISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
YDVVL L + +F I DE +KN A+ T I KA+ +L
Sbjct: 696 DEYDVVLTTYGTLRNDEENYEKLHFDYCILDEGQNIKNPLAQSTKCVKNI--KAKNKFVL 753
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV 393
+GTP + IEL+ + + P+ N + ++ S+ EL ++
Sbjct: 754 TGTPLENNLIELWSIFDFIMPNYLYNSTFFKKKFI--------DNDSSTIELQKFIRP-F 804
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSE-EEVQSL 452
M+RRLKKDV+ +LP K + ++++ +K+ +++YA + ++ +K K++A E +++
Sbjct: 805 MLRRLKKDVIRELPDKIEKNYYVEL-KKEQKKVYASY--VKDIKEKMEAENFERDKITIF 861
Query: 453 KFTEK--------NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
+ K +++ YT AK+ L+ +E I G K L+F+ +L+ I +
Sbjct: 862 SYLTKLRQLCLDPSIVVDKYT-GGSAKLEEALNLIEDNIANGHKILLFSQFTSVLNNISK 920
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
+ K+ + +DG T R LV EF D K ++S+KAGG GL LT+A +I +
Sbjct: 921 ELSENKIEHMYLDGSTKATKRSELVDEFNGSDKYKVFLISLKAGGTGLNLTSADIIIHFD 980
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGH--- 621
W P QA DRAHRIGQ + V V+ L++ T+++ + ++ SK E + +L+
Sbjct: 981 PWWNPAVEDQATDRAHRIGQKNVVQVFKLISEGTIEERIINLQESKKELINGILESDYKS 1040
Query: 622 ENSL 625
EN+L
Sbjct: 1041 ENAL 1044
>gi|193596661|ref|XP_001945595.1| PREDICTED: chromatin-remodeling complex ATPase chain Iswi-like
[Acyrthosiphon pisum]
Length = 1048
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 252/506 (49%), Gaps = 55/506 (10%)
Query: 155 AAPDLREKYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAV- 209
AA ++D+ P +I++ +L +Q G+ + + ++G +LADEMGLGKT+Q I++
Sbjct: 140 AADKFITQFDESPYYIQNGELRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 199
Query: 210 --ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSS 266
+R++ P +++ P S +W ++W P V ++ G + +
Sbjct: 200 GYMKHYRNIPGPHMVIVPKSTLQNWVNEFKKW--CPTIRTVCMI----GDRDTRVKFIRE 253
Query: 267 NTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKK 326
IP D I SY+++++ + +L ++ ++ DE+H +KN ++K + II++
Sbjct: 254 TF---IPGDWDVCITSYEMIIRERAVLRKIQWRYLVIDEAHRIKNEKSKLSE----IIRE 306
Query: 327 AQYA--LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE 384
+ LLL+GTP + EL+ L L PDV+ + ++ + FG + E
Sbjct: 307 FETTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSDDFDQWFNTNNCFG---DNALIER 363
Query: 385 LHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKA 442
LH +++ ++RRLK +V +L K+ +V++ ++ K R+ Y L ++++VV G K
Sbjct: 364 LHAVLRP-FLLRRLKSEVEKRLKPKKEVKVYVGLS-KLQREWYTKVLMKDIDVVNGAGKV 421
Query: 443 CKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAG 486
K +Q++ + N Y D AE P D L+ + E
Sbjct: 422 EKMR--LQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHIVFNCGKMVVFDKLLKALKEQD 479
Query: 487 CKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSM 545
+ L+F+ M+D + K + R+DG TP RQ + E+ E + K +LS
Sbjct: 480 SRVLVFSQMTRMMDILEDYMHWKGYNYCRLDGQTPHEDRQRQINEYNEPNSKKFVFILST 539
Query: 546 KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWD 605
+AGG+G+ L A VI + W P +QA DRAHRIGQ V V+ L+ +TV++ + +
Sbjct: 540 RAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVE 599
Query: 606 V--VRSKLENL----GQVLDGHENSL 625
V+ +L+ L G+++D +N+L
Sbjct: 600 RAEVKLRLDKLVIQQGRLMDNQKNTL 625
>gi|119025981|ref|YP_909826.1| helicase [Bifidobacterium adolescentis ATCC 15703]
gi|118765565|dbj|BAF39744.1| possible helicase [Bifidobacterium adolescentis ATCC 15703]
Length = 1279
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 232/481 (48%), Gaps = 37/481 (7%)
Query: 165 QIPAHIESKLLPFQRDGVRFA---LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
++ +++ L P+Q +G ++ G +LADEMGLGK++Q +++ + P LI
Sbjct: 792 EVSERLKTVLRPYQVEGFQWLSTLWDKGFGGILADEMGLGKSVQLLSLIEARKGSGPSLI 851
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRN--------IP 273
+ P+SL +WAA +++ E+V + R V++ ++ N
Sbjct: 852 VCPASLVYNWAAECEKFAGDLTVEVV---AGTKAQRRKAIATVATQSQENDGATTNGATT 908
Query: 274 LDGLFNII-SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
DG +I SYD++ + + + +F ++ DE+ ++KN K + + ++AL
Sbjct: 909 YDGTDVVITSYDLLRRDVDDYAACHFALMALDEAQYIKNHATKVAKSVKQVTADHRFAL- 967
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
+GTP +R EL+ + L P + ++ +Y + I H + + ++A
Sbjct: 968 -TGTPIENRLSELWSIFDFLMPGLLGTYTKFREKYEQP----IMAPGPEHSVMADKLQAL 1022
Query: 393 VMI---RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEV 449
V + RRLKKDVL LP K + V E + R++YA E + KA ++
Sbjct: 1023 VGLFIKRRLKKDVLTDLPDKF-ENVLTVKLEGEQRKLYAA-HEQRLRATLTKASDADFNT 1080
Query: 450 QSLK-FTEKNLINKIYTD---------SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
+ ++ E L+ +I D +A AK+ A+++ + T ++ G K L+F+ L
Sbjct: 1081 KKIRILAEFTLLREICCDPRLVYADAKNASAKLDAIVELVATCMDEGKKVLVFSQFTSFL 1140
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
+ I ++ V I G TP R LV EF +DV ++S+KAG GL L AS
Sbjct: 1141 ELIGARLAEQGVEYYTITGETPKKRRVELVDEFN-GNDVPVFLISLKAGNTGLNLVGASV 1199
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
V+ A+ W QA DRAHRIGQ VNVY ++A DT+++ + + K E Q D
Sbjct: 1200 VVHADPWWNAAAQNQATDRAHRIGQTQDVNVYQIVAKDTIEERILKLQEKKNELARQFTD 1259
Query: 620 G 620
G
Sbjct: 1260 G 1260
>gi|392598126|gb|EIW87448.1| hypothetical protein CONPUDRAFT_87220 [Coniophora puteana
RWD-64-598 SS2]
Length = 1098
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 138/483 (28%), Positives = 232/483 (48%), Gaps = 52/483 (10%)
Query: 163 YDQIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFR----D 215
+++ P++I + +Q G+ + +L H G +LADEMGLGKT+Q I+ R
Sbjct: 188 FEESPSYIHGTMRAYQLQGLNWMVSLHHNGLNGILADEMGLGKTLQTISFLGYLRHHRNT 247
Query: 216 VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P LI+ P S +WA W P IVV L GS I+++ R IP D
Sbjct: 248 AGPHLIVVPKSTLQNWAREFNNW--TPDVNIVV----LTGSKEERAEIIAN---RLIPQD 298
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
I SY++ L ++ L +F+ ++ DE+H +KN + + I + + LL++G
Sbjct: 299 FDVCITSYEICLIEKSALKKFSFEYIVIDEAHRIKNVDSILSQIVRSFISRGR--LLITG 356
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE--------LHN 387
TP + ELF L + P+++ + + + +G +GA N E+ LH
Sbjct: 357 TPLQNNLKELFALLNFICPEIFTDYADLDSFLHQGD-----EGAENEEDKSRKVVEALHK 411
Query: 388 LMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKIKACKS 445
+++ ++RR+K DV L K+ +++ + E R+ Y L ++++ V G +
Sbjct: 412 ILRP-FLLRRVKADVEKNLLPKKEINIYVGLTEM-QRKWYRSVLEKDIDAVNGLTGKKEG 469
Query: 446 EEEVQSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKF 489
+ + ++ + + Y D AE P A+LD L+++ E G +
Sbjct: 470 KTRLMNMVMQLRKVSCHPYLFDGAEPGPPYTTDEHLIQNCGKMAILDKLLKSLKEKGSRV 529
Query: 490 LIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAG 548
LIF+ +LD + L + RIDGGT R + E+ + D K +L+ +AG
Sbjct: 530 LIFSQMSRVLDILEDYSLFRGYKYCRIDGGTAHDDRIVAIDEYNKPDSEKFLFLLTTRAG 589
Query: 549 GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVR 608
G+G+ LT+A VI + W P +QA DRAHRIGQ V V+ + DTV++ + +
Sbjct: 590 GLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITEDTVEERMLERAA 649
Query: 609 SKL 611
KL
Sbjct: 650 QKL 652
>gi|299471835|emb|CBN77005.1| hypothetical protein Esi_0026_0017 [Ectocarpus siliculosus]
Length = 514
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 154/276 (55%), Gaps = 34/276 (12%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPS 225
+PA + LLPFQRDGV + L+ GR L+ADEMG GKT+QA+ V C+R+ WP+LI+ P+
Sbjct: 244 LPAGLRETLLPFQRDGVLYGLRRRGRCLIADEMGTGKTLQALGVMGCYREDWPLLIVAPA 303
Query: 226 SLRLHWAAMIQQWLN-IPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
S+RL WA +++W + PSEI ++ G ++ T VS + + ++SY
Sbjct: 304 SMRLMWAEEVERWYPFLAPSEIHLI---KGNKDKLYLTNVSRHLWPRV------VVVSYF 354
Query: 285 VVLKLQNILMSSNFKIVIADESHFL------KNAQAKRTAATLPIIKKAQYALLLSGTPA 338
++ L + ++K VI DESH + ++AQ+++ + +A+ ++LSGTP+
Sbjct: 355 MLRMLSASVGKGDWKAVIFDESHMISTSLGGESAQSQQVTVCRQVAGRAKRVVMLSGTPS 414
Query: 339 LSRPIELFKQLEALYPD------VYKNVHEYGNRYCKGGVFG------------IYQGAS 380
LS+P +LF Q+EAL P + K + YC G + G G+
Sbjct: 415 LSKPFDLFNQVEALSPGLLGRAPLLKAKQGFAASYCGGTMRGQMSRGGHVNRVPFISGSE 474
Query: 381 NHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFL 416
+ELH L++ VMIRRLK +V+ QLP R+ FL
Sbjct: 475 YPDELHLLLRNEVMIRRLKANVVNQLPPLRQASFFL 510
>gi|255935291|ref|XP_002558672.1| Pc13g02310 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583292|emb|CAP91300.1| Pc13g02310 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1908
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 152/549 (27%), Positives = 247/549 (44%), Gaps = 116/549 (21%)
Query: 165 QIPAHIESKLLPFQRDGV-------RFALQHGGRILLADEMGLGKTIQAIAVATCFRDV- 216
+IP I+++L P+Q+DGV R+ L HG +L D+MGLGKT+Q I + +
Sbjct: 1311 EIPVAIKAELRPYQQDGVNWLAFLNRYNL-HG---ILCDDMGLGKTLQTICIVASDHHMR 1366
Query: 217 --------------WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFT 262
P LI+ P SL HW ++Q+ + + ++ +G
Sbjct: 1367 AEEFAKSQSTDSRKLPSLIVCPPSLSGHWQQEVKQY-----APFLSCIAYVGPP------ 1415
Query: 263 IVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAAT 320
+ R PL ++I SYDV +IL NF + DE H +KN +AK T++
Sbjct: 1416 ---AERTRLQPLLATTDVIVTSYDVCRNDNDILSPINFNYCVLDEGHLIKNPKAKITSS- 1471
Query: 321 LPIIKK--AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
+KK + + L+LSGTP + +EL+ + L P + +R+ K +
Sbjct: 1472 ---VKKLASNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSK 1528
Query: 379 ASNHEE------LHNLMKATV--MIRRLKKDVLAQLPVK-----------RRQQVFLDVA 419
+S+ E+ + L K + ++RRLK++VL LP K ++++F D
Sbjct: 1529 SSSKEQEAGALAIEALHKQVLPFLLRRLKEEVLNDLPPKIIQNYYCDPSELQKKLFEDFT 1588
Query: 420 EKDMRQIYA------------LFRELEVVKGKIKACKSE-----------EEVQSLKFTE 456
+K+ +++ +F+ L+ ++ + C S EVQS +
Sbjct: 1589 KKEQKELADKVGSADRGDKEHIFQALQYMR---RLCNSPALVVKEGHKQYNEVQSFLSAK 1645
Query: 457 KNLINKIYTDSAEAKIPAVLDYL-----------ETVIEAGCKF------LIFAHHQPML 499
++ I + S K+ A+ D L E ++ G + L+F + ML
Sbjct: 1646 RSNIRDV---SHAPKLNALKDLLVDCGIGLDHTAEGELDTGASYVSPHRALVFCQMKEML 1702
Query: 500 DAIHQLFLKK---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTA 556
D + LKK V +R+DGG RQ +V F +L+ GG+GL LT
Sbjct: 1703 DIVQNDVLKKLLPSVQYLRLDGGVEATKRQDIVNRFNTDPSYDVLLLTTSVGGLGLNLTG 1762
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A TVIF E W P IQA DRAHRIGQ VNVY L+ T+++ + ++ R K++
Sbjct: 1763 ADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAST 1822
Query: 617 VLDGHENSL 625
V++ L
Sbjct: 1823 VVNQQNAGL 1831
>gi|425771331|gb|EKV09777.1| TBP associated factor (Mot1), putative [Penicillium digitatum PHI26]
Length = 2854
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 248/548 (45%), Gaps = 114/548 (20%)
Query: 165 QIPAHIESKLLPFQRDGV-------RFALQHGGRILLADEMGLGKTIQAIAVATCFRDV- 216
+IP I+++L P+Q+DGV R+ L HG +L D+MGLGKT+Q I + +
Sbjct: 2257 EIPVAIKAELRPYQQDGVNWLAFLNRYNL-HG---ILCDDMGLGKTLQTICIVASDHHMR 2312
Query: 217 --------------WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG-SNRSGF 261
P LI+ P SL HW ++Q+ + + ++ +G + RS
Sbjct: 2313 AEEFAKSQSTDSRKLPSLIVCPPSLSGHWQQEVKQY-----APFLSCIAYVGPPAERSRL 2367
Query: 262 TIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATL 321
+ + T + SYDV +IL NF + DE H +KN +AK T++
Sbjct: 2368 QSLLATTD--------VIVTSYDVCRNDNDILCPINFNYCVLDEGHLIKNPKAKITSS-- 2417
Query: 322 PIIKK--AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
+KK + + L+LSGTP + +EL+ + L P + +R+ K + +
Sbjct: 2418 --VKKLASNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKS 2475
Query: 380 SNHEE------LHNLMKATV--MIRRLKKDVLAQLPVK-----------RRQQVFLDVAE 420
S+ E+ + L K + ++RRLK++VL LP K ++++F D ++
Sbjct: 2476 SSKEQEAGALAIEALHKQVLPFLLRRLKEEVLNDLPPKIIQNYYCDPSELQKKLFEDFSK 2535
Query: 421 KDMRQIYA------------LFRELEVVKGKIKACKSE-----------EEVQSLKFTEK 457
K+ +++ +F+ L+ ++ + C S EVQS ++
Sbjct: 2536 KEQKELADKVGSADRGDKEHIFQALQYMR---RLCNSPALVVKEGHKQYNEVQSFLAAKR 2592
Query: 458 NLINKIYTDSAEAKIPAVLDYL-----------ETVIEAGCKF------LIFAHHQPMLD 500
+ I + S K+ A+ D L E ++ G + L+F + MLD
Sbjct: 2593 SNIRDL---SHAPKLNALKDLLVDCGIGLDHTAEGELDTGASYVSPHRALVFCQMKEMLD 2649
Query: 501 AIHQLFLKK---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
+ LKK V +R+DGG RQ +V F +L+ GG+GL LT A
Sbjct: 2650 IVQNDVLKKLLPSVQYLRLDGGVEATKRQDIVNRFNTDPSYDVLLLTTSVGGLGLNLTGA 2709
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
TVIF E W P IQA DRAHRIGQ VNVY L+ T+++ + ++ R K++ V
Sbjct: 2710 DTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTV 2769
Query: 618 LDGHENSL 625
++ L
Sbjct: 2770 VNQQNAGL 2777
>gi|417405705|gb|JAA49556.1| Putative chromatin remodeling complex swi/snf component swi2
[Desmodus rotundus]
Length = 1052
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + F E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAFNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|328702354|ref|XP_003241882.1| PREDICTED: TATA-binding protein-associated factor 172-like
[Acyrthosiphon pisum]
Length = 1782
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 144/537 (26%), Positives = 240/537 (44%), Gaps = 88/537 (16%)
Query: 165 QIPAHIESKLLPFQRDGVR---FALQHGGRILLADEMGLGKTIQAIAVATC--------F 213
++P I +KL +Q+ GV F ++ +L D+MGLGKTIQ++ + +
Sbjct: 1199 KVPIMINAKLRSYQQTGVNWLAFLNKYKLHGILCDDMGLGKTIQSLCILASDHYNKNKKY 1258
Query: 214 RDV-------WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSS 266
++ P +++ P +L HW +Q+++ P I+ L SG +
Sbjct: 1259 KETGGPDSVPLPSIVVCPPTLIGHWTHEVQKFI---PKNILRPLQ------YSGLPVERQ 1309
Query: 267 NTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKK 326
+ LF I+SYD+V K F I DE H +KN + K + A + K
Sbjct: 1310 KLRVYADDYNLF-IVSYDIVRKDIEFFSKIKFNYCILDECHIIKNGKTKASQAIKQL--K 1366
Query: 327 AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELH 386
A + L+LSGTP + +EL+ + L P ++ +Y K + S+ E+
Sbjct: 1367 ANHRLVLSGTPIQNSVLELWSLFDFLMPGFLGTEKQFAAKYSKPILASRDAKCSSKEQET 1426
Query: 387 NLMKATVM--------IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKG 438
++ + +RR+K+DVL+ LP K Q + D++ +Q+Y F + + K
Sbjct: 1427 GVLAMEALHRQVLPFVLRRMKQDVLSDLPAKITQDYYCDLSPIQ-QQLYEDFSKTHIHKH 1485
Query: 439 KIKACKSEEEV----------QSLKFTEK-----------------NLINKIYTDSAE-- 469
+ E+ V Q+L++ + N+I +I ++
Sbjct: 1486 LSETETDEKSVNNPPNKNNILQALRYLQNVCNHPKLVLTPQHPQYSNIIKQISESNSSLT 1545
Query: 470 -----AKIPAVLDYL-----------ETVIEAGCKFLIFAHHQPMLDAIHQLFLKK---K 510
AK+PA+ L +TVI + LIF + ML+ I K
Sbjct: 1546 DIQHAAKLPALKQLLMDCGIGLVSNNDTVISQH-RALIFCQLKSMLNIIENDLFKAHMPN 1604
Query: 511 VHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPG 570
V +R+DG P + R ALV F + +++ + GG+GL LT A TVIF E W+P
Sbjct: 1605 VSYLRLDGSVPVSQRYALVNRFNVDPSIDTLIMTTQVGGLGLNLTGADTVIFVEHDWSPM 1664
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
+QA DRAHRIGQ VNVY L+ T+++ + + + KL+ V+ +SL+
Sbjct: 1665 KDLQAMDRAHRIGQKKVVNVYRLITRSTLEEKIMNFQKFKLKTANTVISSENSSLQT 1721
>gi|301604374|ref|XP_002931866.1| PREDICTED: probable global transcription activator SNF2L1 [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 245/500 (49%), Gaps = 57/500 (11%)
Query: 162 KYDQIPAHIESKLL-PFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATC---FR 214
++++ P++I+ L +Q G+ + + ++G +LADEMGLGKT+Q IA+ +R
Sbjct: 142 RFEESPSYIKGGTLRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYR 201
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-RSGFTIVSSNTKRNI 272
++ P ++L P S +W ++W+ PS V L +G N R+ F R++
Sbjct: 202 NIPGPHMVLVPKSTLHNWMNEFKRWI---PSLCAVCL--IGDKNARAAFI-------RDV 249
Query: 273 PLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
+ G +++ SY++V+K +++ N++ ++ DE+H +KN ++K + K
Sbjct: 250 MMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF--KTTNR 307
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
LLL+GTP + EL+ L L PDV+ + ++ + + G + E LH ++K
Sbjct: 308 LLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNCLGDQKLV---ERLHAVLK 364
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
++RR+K +V LP K+ +++L + K R+ Y L ++++++ K K
Sbjct: 365 P-FLLRRIKAEVEKSLPPKKEVKIYLGLG-KMQREWYTKILMKDIDILNSAGKMDKMR-- 420
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIF 492
+ ++ + N Y D AE P D L E G + LIF
Sbjct: 421 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLVYNSGKMVVLDKLLPKFKEQGSRVLIF 480
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVG 551
+ +LD + + + R+DG TP R+A + F + K +LS +AGG+G
Sbjct: 481 SQMTRVLDILEDYCMWRGYEYCRLDGQTPHEQREAAIETFNSPNSSKFIFMLSTRAGGLG 540
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ L A VI + W P +QA DRAHRIGQ +V V+ L+ ++TV++ + + KL
Sbjct: 541 INLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKTVRVFRLITDNTVEERIVERAEIKL 600
Query: 612 E------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 601 RLDSIVIQQGRLIDQQSNKL 620
>gi|348582546|ref|XP_003477037.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Cavia
porcellus]
Length = 1051
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 244/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 154 LTESSKATNICTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 213
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + +++W +P V ++ R+ F
Sbjct: 214 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSELKRW--VPTLRSVCLIGD--KEQRAAF 269
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 270 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 322
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 323 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 380
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 381 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 435
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 436 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 493
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 494 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 553
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 554 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 613
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 614 ERIVERAEMKL 624
>gi|424866227|ref|ZP_18290068.1| Putative helicase, Snf2 family [Leptospirillum sp. Group II 'C75']
gi|124515798|gb|EAY57307.1| putative helicase, Snf2 family [Leptospirillum rubarum]
gi|387223024|gb|EIJ77396.1| Putative helicase, Snf2 family [Leptospirillum sp. Group II 'C75']
Length = 1049
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 234/489 (47%), Gaps = 51/489 (10%)
Query: 170 IESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDVWP---VLILT 223
+ +L +Q+ GV + L + G +LADEMGLGKT+ +A + D P VLI+
Sbjct: 574 FQGQLRVYQKQGVGWLLRLRERGLHGILADEMGLGKTVTTLAFLSHILDGQPGLAVLIVV 633
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+SL +W ++Q+L N+P + QL G R+ P GL + +
Sbjct: 634 PASLVYNWEKEVRQFLPNVPCTIYHGSQRQLAG--------------RDFPAHGLV-VTT 678
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK-KAQYALLLSGTPALSR 341
Y V + L F +VI DE+ +KN + + +L I + + + L LSGTP +
Sbjct: 679 YGTVRNDIDFLSEQRFSMVILDEAQTIKNPE---SGISLAISRLRGDFRLALSGTPLENN 735
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNL--MKATVMIRRLK 399
++L+ L+P + + + RY +G ++Q E + L + + +++RR K
Sbjct: 736 LVDLWSLFRFLFPGLLGSRKFFEERYVQGKGSPLWQ----KERIGWLRTLVSPLVLRRTK 791
Query: 400 KDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNL 459
KDVLA LP K +++ E++ A+ L + K +I+A + + + L
Sbjct: 792 KDVLADLPEKTVVDHWVEPGEEERTAYRAI---LLMGKEEIRAVSKDRKTFRMNMLALLL 848
Query: 460 INKIYT-------DSAEAKIPAVLDYLETV------IEAGCKFLIFAHHQPMLDAIHQLF 506
+++ + +PA +LET+ + G + L+F+ MLD +
Sbjct: 849 RLRLFCCHPDLVPNPKGISVPAPAKFLETLAKIREALADGHRILLFSQFTGMLDILENAL 908
Query: 507 LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVL--SMKAGGVGLTLTAASTVIFAE 564
LK + R+DG TP RQ LV EFQ + +V S+KAGGVGLTLT A V +
Sbjct: 909 LKDGILFSRLDGKTPLKERQRLVEEFQRQKPGSPSVFLSSLKAGGVGLTLTNADFVFHYD 968
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL-DGHEN 623
W P QA DR+HRIGQ V VY +L TV++ V + KLE V+ +G
Sbjct: 969 PWWNPQVENQATDRSHRIGQKRPVFVYRMLTRGTVEEKVKALKEEKLELFDLVMGEGQPV 1028
Query: 624 SLEVSSSQI 632
+ E S Q+
Sbjct: 1029 AQEWLSRQL 1037
>gi|194466323|ref|ZP_03072310.1| Non-specific serine/threonine protein kinase [Lactobacillus reuteri
100-23]
gi|194453359|gb|EDX42256.1| Non-specific serine/threonine protein kinase [Lactobacillus reuteri
100-23]
Length = 1162
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 140/475 (29%), Positives = 231/475 (48%), Gaps = 40/475 (8%)
Query: 165 QIPAHIESKLLPFQRDGVRFAL-----QHGGRILLADEMGLGKTIQAIAVATCFRDVWPV 219
++PA++ + L P+Q DGV++ + GG LLADEMGLGKT+Q I V +
Sbjct: 695 KVPANLHATLRPYQYDGVQWLMALMKYHFGG--LLADEMGLGKTLQIITVLLSEQGNGQN 752
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
LI+ P+++ +W I ++ P V VL R F + +T+R+I
Sbjct: 753 LIVAPAAVIYNWQDEINKF---APDLKVTVLDGSKAERRKQF---AQSTERDII------ 800
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
I SYD + + F I + DE+ ++KN Q I K ++AL +GTP
Sbjct: 801 ITSYDAAKRDIDFYEGHVFNIEVIDEAQYIKNPQTAAAKTVKAINAKQRFAL--TGTPIE 858
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLK 399
+R EL+ + L P + ++ +Y +G + Q ++L L++ M+RRLK
Sbjct: 859 NRLSELWSIFDYLMPGFLGSYQQFRKQY-EGPIIK-NQDDQAQDDLKRLVQP-FMLRRLK 915
Query: 400 KDVLAQLPVKRRQQVFLD------------VAEKDMRQIYALFRELEVVKGKIKACKSEE 447
KDVL LP+K +QVFL A++ +RQI E E + K+
Sbjct: 916 KDVLNDLPMKN-EQVFLTPMVGKQESLYQARAQRLIRQIQKQNDE-EFQQNKLAVLAEIT 973
Query: 448 EVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFL 507
++ L + + L+++ Y+ KI A ++ ++ + K L+F+ L + +
Sbjct: 974 RLRELCCSPQ-LLDRGYS-GPSGKIKATMNLIKDEVADNHKILLFSQFTSALAILKEKLA 1031
Query: 508 KKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSW 567
K + I+G T A R V EF D ++S+KAGG GL LT+A VI + W
Sbjct: 1032 KAGIKYFVIEGKTKKADRLQFVDEFNSYDQPAVFLISLKAGGTGLNLTSADVVIHFDPWW 1091
Query: 568 TPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
QA DRAHRIGQ ++V +Y ++A +T+++ + ++ + K +L G+E
Sbjct: 1092 NIAAENQATDRAHRIGQKNNVTIYKMIAQNTIEEKIIEMQQKKAALANSILSGNE 1146
>gi|212715703|ref|ZP_03323831.1| hypothetical protein BIFCAT_00603 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212661070|gb|EEB21645.1| hypothetical protein BIFCAT_00603 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 1239
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 224/477 (46%), Gaps = 34/477 (7%)
Query: 165 QIPAHIESKLLPFQRDGVRFA---LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
++P+ +++ L P+Q +G ++ G +LADEMGLGK++Q +++ + P LI
Sbjct: 757 EVPSKLKNVLRPYQVEGFQWLSTLWDKGFGGILADEMGLGKSVQLLSLVEARKGSGPALI 816
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN-- 279
+ P+SL +WAA +++ E+V + R + N P
Sbjct: 817 VCPASLVYNWAAECEKFTQDLTIEVVAGTK----AQRRKLIATVAQQWNNSPATNETQQT 872
Query: 280 ---IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
I SYD++ + + F ++ DE+ ++KN K A I + ++AL +GT
Sbjct: 873 DVVITSYDLLRRDVDDYADCRFALMALDEAQYIKNHATKLAKAVKQITAEHRFAL--TGT 930
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMI- 395
P +R EL+ + L P + ++ +Y + I H + + ++A V +
Sbjct: 931 PIENRLSELWSIFDFLMPGLLGTYTKFREKYEQP----IMAPGPEHSVMADKLQALVGLF 986
Query: 396 --RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
RRLKKDVL LP K + V E + R++YA E + K ++ + ++
Sbjct: 987 IKRRLKKDVLTDLPDKF-ENVLTVKLEGEQRKLYAA-HEQRLRATLTKTKDADFNTKKIR 1044
Query: 454 -FTEKNLINKIYTD---------SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
E L+ +I D +A AK+ A+ + + T ++ G K L+F+ LD I
Sbjct: 1045 ILAEFTLLREICCDPRLVYADAKNASAKLDAICELVSTCMDEGKKVLVFSQFTSFLDLIG 1104
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
+ V I G TP R LV EF +D+ ++S+KAG GL L AS V+ A
Sbjct: 1105 TRLAEHGVDFYTITGETPKKRRVELVDEFN-GNDIPVFLISLKAGNTGLNLVGASVVVHA 1163
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
+ W QA DRAHRIGQ VNVY ++A DT+++ + + K E Q DG
Sbjct: 1164 DPWWNAAAQNQATDRAHRIGQTQDVNVYQIVAKDTIEERILKLQEKKSELAQQFTDG 1220
>gi|355720696|gb|AES07016.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Mustela putorius furo]
Length = 1030
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|301777862|ref|XP_002924349.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Ailuropoda melanoleuca]
Length = 1052
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|149698191|ref|XP_001502076.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Equus
caballus]
Length = 1052
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|341896012|gb|EGT51947.1| CBN-ISW-1 protein [Caenorhabditis brenneri]
Length = 1009
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 232/476 (48%), Gaps = 45/476 (9%)
Query: 163 YDQIPAHIES-KLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFR---- 214
+D+ P +IE+ ++ +Q G+ + +LQH +LADEMGLGKT+Q I++ +
Sbjct: 120 FDKSPFYIENGEMRDYQVRGLNWLASLQHNNINGILADEMGLGKTLQTISLLGYMKHYKN 179
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P S +WA ++W P + VV++ NR T++ +P
Sbjct: 180 KASPHLVIVPKSTLQNWANEFKKW--CPSIKAVVLIGDEEARNRVLQTVI-------LPQ 230
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
D +Y+++LK++ L +K +I DE+H +KN ++K + + ++ LL++
Sbjct: 231 DFDVCCTTYEMMLKVKGQLKKLRWKYIIIDEAHRIKNEKSKLSETVREL--NSENRLLIT 288
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVM 394
GTP + EL+ L L PD++ + ++ + + + G + LH +++ +
Sbjct: 289 GTPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSNDAMSG---NTDLVQRLHKVLQP-FL 344
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSL 452
+RR+K DV L K+ +V++ ++ K R+ Y L ++++++ G K K+ + ++
Sbjct: 345 LRRIKSDVEKSLLPKKEVKVYVGLS-KMQREWYTKVLMKDIDIINGAGKVEKAR--LMNI 401
Query: 453 KFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAHHQ 496
+ +N Y D AE P D L + E G + LIF+
Sbjct: 402 LMHLRKCVNHPYLFDGAEPGPPYTTDQHLVDNSGKMVVLDKLLVKLKEQGSRVLIFSQFS 461
Query: 497 PMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLT 555
MLD + + R+DG TP R + + D K +L+ +AGG+G+ L
Sbjct: 462 RMLDLLEDYCWWRHYDYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLA 521
Query: 556 AASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
A VI + W P +QA DRAHRIGQ V V+ L+ +TVD+ + + +KL
Sbjct: 522 TADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKL 577
>gi|431918301|gb|ELK17528.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Pteropus alecto]
Length = 1149
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 154 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 213
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 214 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 269
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 270 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 322
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 323 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 380
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 381 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 435
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 436 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 493
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 494 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFV 553
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 554 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 613
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 614 ERIVERAEMKL 624
>gi|335293809|ref|XP_003129222.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Sus scrofa]
Length = 1052
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|225352246|ref|ZP_03743269.1| hypothetical protein BIFPSEUDO_03862 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225157493|gb|EEG70832.1| hypothetical protein BIFPSEUDO_03862 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 1158
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 137/476 (28%), Positives = 228/476 (47%), Gaps = 32/476 (6%)
Query: 165 QIPAHIESKLLPFQRDGVRFA---LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
++P ++++ L P+Q +G ++ G +LADEMGLGK++Q +++ + P LI
Sbjct: 676 EVPRNLKNVLRPYQVEGFQWLSTLWDKGFGGILADEMGLGKSVQLLSLVEARKGSGPALI 735
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL---- 277
+ P+SL +WAA +++ E+V + R V+ K + +
Sbjct: 736 VCPASLVYNWAAECEKFTQDLTIEVV---AGTKAQRRKLIAAVAQQWKNPSESNDMQRTD 792
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
I SYD++ + + + F ++ DE+ ++KN K A I + ++AL +GTP
Sbjct: 793 VVITSYDLLRRDVDDYAACRFALMALDEAQYIKNHATKLAKAVKQITAEHRFAL--TGTP 850
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMI-- 395
+R EL+ + L P + ++ +Y + I S H + + ++A V +
Sbjct: 851 IENRLSELWSIFDFLMPGLLGTYTKFREKYEQP----IMAPGSEHSVMADKLQALVGLFI 906
Query: 396 -RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK- 453
RRLKKDVL LP K + V E + R++YA E + K ++ + ++
Sbjct: 907 KRRLKKDVLTDLPDKF-ENVLTVKLEGEQRKLYAA-HEQRLRATLTKTKDADFNTKKIRI 964
Query: 454 FTEKNLINKIYTD---------SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
E L+ +I D +A AK+ A+ + + T ++ K L+F+ LD I
Sbjct: 965 LAEFTLLREICCDPRLVYADAKNASAKLDAICELVSTCMDESKKVLVFSQFTSFLDLIGT 1024
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
++ V I G TP R LV EF +DV ++S+KAG GL L AS V+ A+
Sbjct: 1025 RLAEQGVDFYTITGETPKKRRVELVDEFN-GNDVPVFLISLKAGNTGLNLVGASVVVHAD 1083
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
W QA DRAHRIGQ VNVY ++A DT+++ + + K E Q DG
Sbjct: 1084 PWWNAAAQNQATDRAHRIGQTQDVNVYQIVAKDTIEERILKLQEKKSELAQQFTDG 1139
>gi|344291654|ref|XP_003417549.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Loxodonta
africana]
Length = 1052
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|410956805|ref|XP_003985028.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Felis
catus]
Length = 1052
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|281337316|gb|EFB12900.1| hypothetical protein PANDA_013661 [Ailuropoda melanoleuca]
Length = 912
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 72 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 131
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 132 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 187
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 188 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 240
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 241 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 298
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 299 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 353
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 354 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 411
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 412 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFV 471
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 472 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 531
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 532 ERIVERAEMKL 542
>gi|57096815|ref|XP_532676.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 isoform 1
[Canis lupus familiaris]
Length = 1052
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|157427958|ref|NP_001098886.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Bos taurus]
gi|157279332|gb|AAI53226.1| SMARCA5 protein [Bos taurus]
Length = 1052
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFN--IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G ++ + SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDLCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|351713893|gb|EHB16812.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5, partial [Heterocephalus
glaber]
Length = 993
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 96 LTESSKATNICTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 155
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 156 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 211
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 212 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 264
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 265 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 322
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 323 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 377
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 378 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 435
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 436 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 495
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 496 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 555
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 556 ERIVERAEMKL 566
>gi|40254124|ref|NP_444354.2| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Mus musculus]
gi|55977469|sp|Q91ZW3.1|SMCA5_MOUSE RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5; AltName:
Full=Sucrose nonfermenting protein 2 homolog;
Short=mSnf2h
gi|16551316|gb|AAL25793.1|AF375046_1 ATP-dependent chromatin remodeling protein SNF2H [Mus musculus]
gi|31419851|gb|AAH53069.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Mus musculus]
Length = 1051
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 154 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 213
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 214 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKKW--VPTLRSVCLIGD--KEQRAAF 269
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 270 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 322
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 323 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 380
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 381 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 435
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 436 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 493
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 494 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 553
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 554 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 613
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 614 ERIVERAEMKL 624
>gi|426246999|ref|XP_004017274.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Ovis aries]
Length = 1052
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|296478735|tpg|DAA20850.1| TPA: SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin a5 [Bos taurus]
gi|440889489|gb|ELR44647.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Bos grunniens mutus]
Length = 1052
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|291401180|ref|XP_002716976.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a5-like [Oryctolagus cuniculus]
Length = 1051
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 154 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 213
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 214 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 269
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 270 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 322
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 323 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 380
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 381 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 435
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 436 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 493
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 494 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 553
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 554 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 613
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 614 ERIVERAEMKL 624
>gi|307105253|gb|EFN53503.1| hypothetical protein CHLNCDRAFT_136836 [Chlorella variabilis]
Length = 445
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 159/286 (55%), Gaps = 26/286 (9%)
Query: 357 YKNVHEYGNRYCKGGVF--GIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQV 414
++ G R +GG + G+SN ELH L+++ +M+RRLKKDVL LP K R+++
Sbjct: 36 FRQAQGAGLRSGRGGRWPAAAAGGSSNLVELHELLESHIMVRRLKKDVLDDLPDKIRKRI 95
Query: 415 FLDVAEKDMRQIYALFRELEVVK-----GKIKACKSEEEVQSLKFTEKNLINKIYTDSAE 469
++ + + RE++ V+ G+I EE V++ + L+++ Y +
Sbjct: 96 PIEPDPAHVPGLQKTVREMKQVEQDEVGGRISG---EEAVRA----RQQLLSEYYRRTGP 148
Query: 470 AKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPAS----- 524
AK+ ++ +++EAG K L+FAHHQ +LD + +++V +RIDG
Sbjct: 149 AKVQDARAHIVSLLEAGVKVLVFAHHQAVLDGLQAALREEQVAHVRIDGQASAPLAAAAS 208
Query: 525 ------RQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDR 578
R+A V FQ +AA+LS+ A G G+TLT A V+F EL W PG L+QAEDR
Sbjct: 209 SVLNERRKAAVDTFQRDRACRAALLSITAAGTGITLTEAQAVVFVELYWNPGQLVQAEDR 268
Query: 579 AHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 624
AHR+GQ + V+YL+A T DD +W + + KL +G + G E++
Sbjct: 269 AHRLGQRRVLEVHYLVAPGTADDTIWRLCQHKLGVVGGAM-GEEDA 313
>gi|296195484|ref|XP_002745366.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 isoform 1
[Callithrix jacchus]
Length = 1052
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|157817975|ref|NP_001100889.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Rattus norvegicus]
gi|149037939|gb|EDL92299.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 995
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 98 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 157
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 158 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 213
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 214 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 266
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 267 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 324
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 325 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 379
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 380 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 437
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 438 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 497
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 498 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 557
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 558 ERIVERAEMKL 568
>gi|388453347|ref|NP_001253253.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Macaca mulatta]
gi|332217318|ref|XP_003257807.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Nomascus
leucogenys]
gi|402870539|ref|XP_003899273.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Papio
anubis]
gi|355687630|gb|EHH26214.1| hypothetical protein EGK_16126 [Macaca mulatta]
gi|380783625|gb|AFE63688.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Macaca mulatta]
gi|383408717|gb|AFH27572.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Macaca mulatta]
gi|384941584|gb|AFI34397.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Macaca mulatta]
Length = 1052
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|432114072|gb|ELK36119.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Myotis davidii]
Length = 1052
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|297674406|ref|XP_002815220.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like,
partial [Pongo abelii]
Length = 816
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|403272423|ref|XP_003928064.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Saimiri
boliviensis boliviensis]
Length = 1052
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|325651836|ref|NP_003592.3| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Homo sapiens]
gi|57014128|sp|O60264.1|SMCA5_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5;
Short=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin A5; AltName: Full=Sucrose
nonfermenting protein 2 homolog; Short=hSNF2H
gi|2967452|dbj|BAA25173.1| hSNF2H [Homo sapiens]
gi|18606276|gb|AAH23144.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Homo sapiens]
gi|119625476|gb|EAX05071.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Homo sapiens]
gi|168275690|dbj|BAG10565.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [synthetic construct]
gi|325463895|gb|ADZ15718.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [synthetic construct]
Length = 1052
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|395834498|ref|XP_003790238.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Otolemur
garnettii]
Length = 1052
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|148678936|gb|EDL10883.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Mus musculus]
Length = 993
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 96 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 155
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 156 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKKW--VPTLRSVCLIGD--KEQRAAF 211
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 212 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 264
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 265 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 322
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 323 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 377
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 378 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 435
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 436 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 495
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 496 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 555
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 556 ERIVERAEMKL 566
>gi|426345573|ref|XP_004040481.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Gorilla
gorilla gorilla]
Length = 1000
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 103 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 162
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 163 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 218
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 219 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 271
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 272 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 329
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 330 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 384
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 385 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 442
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 443 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 502
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 503 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 562
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 563 ERIVERAEMKL 573
>gi|397500075|ref|XP_003820752.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Pan
paniscus]
Length = 1052
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|227545238|ref|ZP_03975287.1| SNF2 helicase associated domain protein [Lactobacillus reuteri
CF48-3A]
gi|338202421|ref|YP_004648566.1| non-specific serine/threonine protein kinase [Lactobacillus reuteri
SD2112]
gi|227184771|gb|EEI64842.1| SNF2 helicase associated domain protein [Lactobacillus reuteri
CF48-3A]
gi|336447661|gb|AEI56276.1| non-specific serine/threonine protein kinase [Lactobacillus reuteri
SD2112]
Length = 1161
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 140/475 (29%), Positives = 231/475 (48%), Gaps = 40/475 (8%)
Query: 165 QIPAHIESKLLPFQRDGVRFAL-----QHGGRILLADEMGLGKTIQAIAVATCFRDVWPV 219
++PA++ + L P+Q DGV++ + GG LLADEMGLGKT+Q I V +
Sbjct: 694 KVPANLHATLRPYQYDGVQWLMALMKYHFGG--LLADEMGLGKTLQIITVLLSEQGNGQN 751
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
LI+ P+++ +W I+++ P V VL R F + +T+R+I
Sbjct: 752 LIVAPAAVIYNWQDEIKKF---APDLKVTVLDGSKAERRKQF---AQSTERDII------ 799
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
I SYD + + F I + DE+ ++KN Q I K ++AL +GTP
Sbjct: 800 ITSYDAAKRDIDFYEGHLFNIEVIDEAQYIKNPQTAAAKTVKAINAKQRFAL--TGTPIE 857
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLK 399
+R EL+ + L P + ++ +Y +G + Q ++L L++ M+RRLK
Sbjct: 858 NRLSELWSIFDYLMPGFLGSYQQFRKQY-EGPIIK-NQDNQAQDDLKRLVQP-FMLRRLK 914
Query: 400 KDVLAQLPVKRRQQVFLD------------VAEKDMRQIYALFRELEVVKGKIKACKSEE 447
KDVL LP+K +QVFL A++ +RQI E E + K+
Sbjct: 915 KDVLNDLPMKN-EQVFLTPMVGKQESLYQARAQRLIRQIQKQNDE-EFQQNKLAVLAEIT 972
Query: 448 EVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFL 507
++ L + + L++ Y+ KI A ++ ++ + K L+F+ L + +
Sbjct: 973 RLRELCCSPQ-LLDSGYS-GPSGKIKATMNLIKDEVADNHKILLFSQFTSALAILKEKLA 1030
Query: 508 KKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSW 567
K + I+G T A R V EF D ++S+KAGG GL LT+A VI + W
Sbjct: 1031 KAGIKYFVIEGKTKKADRLQFVDEFNSYDQPAVFLISLKAGGTGLNLTSADVVIHFDPWW 1090
Query: 568 TPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
QA DRAHRIGQ ++V +Y ++A +T+++ + ++ + K +L G+E
Sbjct: 1091 NIAAENQATDRAHRIGQKNNVTIYKMIAQNTIEEKIIEMQQKKAALANSILSGNE 1145
>gi|218191385|gb|EEC73812.1| hypothetical protein OsI_08529 [Oryza sativa Indica Group]
Length = 1765
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 205/427 (48%), Gaps = 53/427 (12%)
Query: 193 LLADEMGLGKTIQAIAV---ATCFRDVW-PVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
+LADEMGLGKTI I++ C + +W P LI+ P+S+ L+W +W P +I+
Sbjct: 544 ILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKW--CPAFKIL- 600
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN-------IISYDVVLKLQNILMSSNFKIV 301
T S +R G I +Y +V++ + +K +
Sbjct: 601 -------------TYFGSAKERKQKRQGWMKPNYFHVCITTYRLVIQDSKVFKRKKWKYL 647
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
I DE+H +KN +++R L K + +LL+GTP + +EL+ + L P V+++
Sbjct: 648 ILDEAHLIKNWKSQRWQTLLNFNSKRR--ILLTGTPLQNDLMELWSLMHFLMPHVFQSHQ 705
Query: 362 EYGNRYCKGGVFGIYQGAS--NHE---ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFL 416
E+ + +C + G+ +G N E LHN+++ ++RRLK+DV QLP K ++
Sbjct: 706 EFKDWFC-NPISGMVEGQDKVNKEVIDRLHNVLRP-FILRRLKRDVEKQLPQKHEHVIYC 763
Query: 417 DVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVL 476
++ + R +Y F I + +++ + S + +I+ I E I
Sbjct: 764 RLSRR-QRNLYEDF---------IASSETQATLASGNYF--GMISIIMQLRKELAI---- 807
Query: 477 DYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD 536
L + G + LIF MLD + + +R+DG T P RQ L+ F
Sbjct: 808 -LLRRLKSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLDGSTQPEERQTLMQRFNTNP 866
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN 596
+LS ++GGVG+ L A TVIF + W P QA+DR HRIGQ V++Y L++
Sbjct: 867 KFFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISE 926
Query: 597 DTVDDIV 603
T+++ +
Sbjct: 927 STIEENI 933
>gi|410223740|gb|JAA09089.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Pan troglodytes]
gi|410267210|gb|JAA21571.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Pan troglodytes]
Length = 1052
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|355749594|gb|EHH53993.1| hypothetical protein EGM_14722 [Macaca fascicularis]
Length = 1052
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|194380928|dbj|BAG64032.1| unnamed protein product [Homo sapiens]
Length = 995
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 98 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 157
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 158 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 213
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 214 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 266
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 267 VREF--KTTNRLLLTGTPLQNSLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 324
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 325 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 379
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 380 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 437
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 438 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 497
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 498 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 557
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 558 ERIVERAEMKL 568
>gi|354488354|ref|XP_003506335.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Cricetulus griseus]
Length = 1042
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 145 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 204
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 205 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 260
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 261 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 313
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 314 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 371
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 372 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 426
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 427 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 484
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 485 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 544
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 545 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 604
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 605 ERIVERAEMKL 615
>gi|410442557|ref|NP_001258588.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Pan troglodytes]
gi|343962353|dbj|BAK62764.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Pan troglodytes]
Length = 1052
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTADMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|410294848|gb|JAA26024.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Pan troglodytes]
Length = 1052
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>gi|295424920|ref|ZP_06817632.1| possible non-specific serine/threonine protein kinase [Lactobacillus
amylolyticus DSM 11664]
gi|295065359|gb|EFG56255.1| possible non-specific serine/threonine protein kinase [Lactobacillus
amylolyticus DSM 11664]
Length = 1090
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 144/484 (29%), Positives = 235/484 (48%), Gaps = 55/484 (11%)
Query: 162 KYDQIPAHIESKLLPFQRDGVRFA---LQHGGRILLADEMGLGKTIQAIAV--ATCFRDV 216
K ++IPA ++ L P+Q G ++ L + LLADEMGLGKT+Q I+V A +
Sbjct: 618 KKNKIPASLKKVLRPYQVKGYQWMTTLLDYNLGGLLADEMGLGKTLQVISVLLARKAKTK 677
Query: 217 WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDG 276
P LI+ P+S+ +W A I+++ P E++V LGGS + + T + +
Sbjct: 678 LPSLIVVPASVVYNWEAEIKKF--APELEMIV----LGGSKKERREQLERVTDQVL---- 727
Query: 277 LFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
I SYD + + + F + + DE+ +KNA+A + A I A++ L L+GT
Sbjct: 728 ---ITSYDSLKRDLKLYEKIGFDLEVIDEAQNIKNAKAAVSKAVKII--NARHRLALTGT 782
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIR 396
P + EL+ + L P + + Y K V + ++L ++ A ++R
Sbjct: 783 PIENNLSELWSIFDYLMPGFLGEYEYFRSNYEKPIVKD--EDKKKGKQLSQII-APFVLR 839
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF--RELEVVKGKIKAC------KSEEE 448
RLKKDVL LP EKD + IYA R+ E+ + + + + +++
Sbjct: 840 RLKKDVLKDLP------------EKDEQVIYAKLSGRQDELYQAQTQKLIAQLNKQDDKD 887
Query: 449 VQSLKFTEKNLINKI----------YTD--SAEAKIPAVLDYLETVIEAGCKFLIFAHHQ 496
+ +F I K+ Y D AK+ A ++ +E I G K L+F+
Sbjct: 888 FKKQRFQVLAAITKLRELCCDPHLLYEDYRGKSAKLAATMELIEDSIADGHKILLFSQFT 947
Query: 497 PMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTA 556
ML+ I Q + K+ I G TP RQ L+ +F + D ++S+KAGG G+ LT+
Sbjct: 948 SMLELIEQKLKQAKIVTFVITGSTPKQKRQELIKQFNKLDHPAIFLISLKAGGTGINLTS 1007
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A VI + W QA DRAHRIGQ +V +Y ++A T+++ + ++ K + +
Sbjct: 1008 ADVVIHYDPWWNVAAENQATDRAHRIGQKHNVQIYKMVAKGTIEEKIVELQERKEKLADE 1067
Query: 617 VLDG 620
VL G
Sbjct: 1068 VLSG 1071
>gi|321469421|gb|EFX80401.1| hypothetical protein DAPPUDRAFT_318579 [Daphnia pulex]
Length = 1037
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 247/497 (49%), Gaps = 51/497 (10%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAV---ATCFR 214
++D P +I+ ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +R
Sbjct: 123 RFDTSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYR 182
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
++ P +++ P S +W ++W P+ V L+ G + IV +P
Sbjct: 183 NINGPHMVIVPKSTLANWMNEFKKWC---PTLRAVCLT---GDQETRANIVRDEI---MP 233
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
+ + SY++V+K + + N++ ++ DE+H +KN ++K + K LL+
Sbjct: 234 GEWDACVTSYEIVMKERAVFKKFNWRYMVIDEAHRIKNEKSKLSEIVREF--KTSNRLLI 291
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV 393
+GTP + EL+ L L PD++ N ++ + G S LH +++
Sbjct: 292 TGTPLQNNLHELWALLNFLLPDIFNNSEDFDEWFNANNCLG---DDSLIHRLHAVLRP-F 347
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEVQS 451
++RRLK +V +L K+ +V++ ++ K R++Y L R++++V G K K +Q+
Sbjct: 348 LLRRLKAEVEKRLKPKKEVKVYIGLS-KMQREMYTKILMRDIDIVNGAGKLEKMR--LQN 404
Query: 452 LKFTEKNLINKIYT-DSAEAKIP--------------AVLDYLETVIEA-GCKFLIFAHH 495
+ + N Y D AE P +LD L ++A G + LIF+
Sbjct: 405 ILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVYNCGKMVILDKLLPKLKAQGSRVLIFSQM 464
Query: 496 QPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTL 554
MLD + L + + R+DG TP R + E+ D K +LS +AGG+G+ L
Sbjct: 465 TRMLDILEDYSLWRGYNYCRLDGSTPHEDRHRQIEEYNAPDSKKFLFMLSTRAGGLGINL 524
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDV--VRSKLE 612
A V+ + W P +QA DRAHRIGQ+ V V+ + ++TV++ + + V+ +L+
Sbjct: 525 ATADVVVLFDSDWNPQMDLQAMDRAHRIGQLKQVRVFRFITDNTVEEKIVEKAEVKLRLD 584
Query: 613 NL----GQVLDGHENSL 625
L G++LD ++L
Sbjct: 585 KLVIQQGRLLDKTNSAL 601
>gi|221046276|dbj|BAH14815.1| unnamed protein product [Homo sapiens]
Length = 995
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 242/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 98 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 157
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 158 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 213
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H KN ++K +
Sbjct: 214 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRTKNEKSKLSEI 266
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 267 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 324
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 325 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 379
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 380 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 437
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 438 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 497
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 498 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 557
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 558 ERIVERAEMKL 568
>gi|115389418|ref|XP_001212214.1| hypothetical protein ATEG_03036 [Aspergillus terreus NIH2624]
gi|114194610|gb|EAU36310.1| hypothetical protein ATEG_03036 [Aspergillus terreus NIH2624]
Length = 1896
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 153/553 (27%), Positives = 241/553 (43%), Gaps = 124/553 (22%)
Query: 165 QIPAHIESKLLPFQRDGV-------RFALQHGGRILLADEMGLGKTIQAIAVATCFRDV- 216
Q+P I+++L P+Q++GV R+ L HG +L D+MGLGKT+Q I + +
Sbjct: 1298 QLPVAIKAELRPYQQEGVNWLAFLNRYNL-HG---ILCDDMGLGKTLQTICIVASDHHMR 1353
Query: 217 --------------WPVLILTPSSLRLHWAAMIQQW---LNI-----PPSEIVVVLSQLG 254
P LI+ P SL HW I+Q+ LN PP+E +L
Sbjct: 1354 AEEFAKTQAPEVRKLPSLIVCPPSLSGHWQQEIKQYAPFLNCVAYVGPPAE----RGKLK 1409
Query: 255 GSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQA 314
G+ +V+S YD+ L N+ + DE H +KN +A
Sbjct: 1410 GALADADIVVTS----------------YDICRNDSETLCPINWNYCVLDEGHLIKNPKA 1453
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
K T A I + + L+LSGTP + +EL+ + L P + +R+ K
Sbjct: 1454 KVTIAVKRI--SSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAAS 1511
Query: 375 IYQGASNHEE------LHNLMKATV--MIRRLKKDVLAQLPVK-----------RRQQVF 415
+ +S+ E+ + L K + ++RRLK++VL LP K ++++F
Sbjct: 1512 RFSKSSSKEQEAGALAIEALHKQVLPFLLRRLKEEVLNDLPPKIIQNYYCDPSELQKKLF 1571
Query: 416 LDVAEKDMRQIYA------------LFRELEVVKGKIKACKSE-----------EEVQSL 452
D +K+ +Q+ + +F+ L+ ++ + C S EVQ
Sbjct: 1572 EDFTKKEQKQLASKMGSSEKSDKEHIFQALQYMR---RLCNSPALVVKEGHKQYNEVQQY 1628
Query: 453 KFTEKNLINKIYTDSAEAKIPAVLDYL-----------ETVIEAGCKF------LIFAHH 495
+ + I + S K+ A+ D L ET + G + L+F
Sbjct: 1629 LHAKNSYIRDV---SHAPKLTALRDLLLDCGIGVAPPSETDLGTGASYVSPHRALVFCQM 1685
Query: 496 QPMLDAIHQLFLKK---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGL 552
+ MLD + LKK V +R+DGG RQ +V F +L+ GG+GL
Sbjct: 1686 KEMLDIVQSEVLKKLLPSVQFLRLDGGVEATRRQDIVNRFNTDPSYDVLLLTTSVGGLGL 1745
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
LT A TVIF E W P IQA DRAHRIGQ VNVY L+ T+++ + ++ R K++
Sbjct: 1746 NLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKID 1805
Query: 613 NLGQVLDGHENSL 625
V++ L
Sbjct: 1806 VASTVVNQQNAGL 1818
>gi|326918376|ref|XP_003205465.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Meleagris gallopavo]
Length = 1020
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/513 (25%), Positives = 252/513 (49%), Gaps = 59/513 (11%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S ++ ++++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 122 LTESSKTTNVCTRFEESPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 181
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W ++W +P V ++ R+ F
Sbjct: 182 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRW--VPTLRAVCLIGD--KDQRAAF 237
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 238 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 290
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 291 VREF--KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLV 348
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 349 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 403
Query: 438 --GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------L 479
GK+ + + ++ + N Y D AE P D L
Sbjct: 404 SAGKLDKMR----LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLL 459
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
+ E G + LIF+ +LD + + + R+DG TP RQA + + E K
Sbjct: 460 PKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSK 519
Query: 540 AA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++T
Sbjct: 520 FVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNT 579
Query: 599 VDDIVWDVVRSKLE------NLGQVLDGHENSL 625
V++ + + KL G+++D + N L
Sbjct: 580 VEERIVERAEMKLRLDSIVIQQGRLVDQNLNKL 612
>gi|312079660|ref|XP_003142270.1| transcription activator [Loa loa]
Length = 1062
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 235/479 (49%), Gaps = 49/479 (10%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDV- 216
++++ P +IE+ ++ +Q G+ + +LQH G +LADEMGLGKT+Q +AV +
Sbjct: 153 RFEKTPFYIENGEMRDYQIRGLNWLISLQHNGINGILADEMGLGKTLQTVAVIGFMKHYK 212
Query: 217 ---WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P L++ P S +W +W PS + L G ++ RN
Sbjct: 213 NASGPHLVIAPKSTLQNWINEFGKWC---PSLKAIALI--------GIAEARADLIRNEI 261
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
L G ++++ SY++VLK +++L ++ ++ DE+H +KN +K + K+++ L
Sbjct: 262 LPGKWDVLVTSYEMVLKEKSLLRKYAWQYLVIDEAHRIKNEHSKLSEIVREF--KSRHRL 319
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PD++ ++ + + + G + LH ++K
Sbjct: 320 LITGTPLQNNLHELWALLNFLLPDMFALASDFDSWFTTNDMMGNQDLVAR---LHKVLKP 376
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK DV L K+ ++++ ++ K R+ Y L ++++VV G K K+ +
Sbjct: 377 -FLLRRLKSDVEKSLLPKKEVKIYVGLS-KMQREWYTKILMKDIDVVNGAGKLEKAR--I 432
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFA 493
++ + N Y D AE P D L + E G + LIF+
Sbjct: 433 MNILMHLRKCCNHPYLFDGAEPGPPYTTDQHLVDNSGKMVLLDKLLVKLKEQGSRVLIFS 492
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + + R+DG T RQ + EF + D K +L+ +AGG+G+
Sbjct: 493 SMSRMLDLLEDYCWWRSYRYCRLDGQTVHDERQKSIDEFNKPDSDKFIFMLTTRAGGLGI 552
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
LTAA VI + W P +QA DRAHRIGQ V V+ + ++TVD+ + + KL
Sbjct: 553 NLTAADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNTVDERIIERAEMKL 611
>gi|363733106|ref|XP_001234486.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Gallus
gallus]
Length = 1001
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/513 (25%), Positives = 252/513 (49%), Gaps = 59/513 (11%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S ++ ++++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 103 LTESSKTTNVCTRFEESPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 162
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W ++W +P V ++ R+ F
Sbjct: 163 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRW--VPTLRAVCLIGD--KDQRAAF 218
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 219 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 271
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 272 VREF--KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLV 329
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 330 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 384
Query: 438 --GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------L 479
GK+ + + ++ + N Y D AE P D L
Sbjct: 385 SAGKLDKMR----LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLL 440
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
+ E G + LIF+ +LD + + + R+DG TP RQA + + E K
Sbjct: 441 PKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSK 500
Query: 540 AA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++T
Sbjct: 501 FVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNT 560
Query: 599 VDDIVWDVVRSKLE------NLGQVLDGHENSL 625
V++ + + KL G+++D + N L
Sbjct: 561 VEERIVERAEMKLRLDSIVIQQGKLVDQNLNKL 593
>gi|393911512|gb|EFO21800.2| transcription activator [Loa loa]
Length = 1110
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 235/479 (49%), Gaps = 49/479 (10%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDV- 216
++++ P +IE+ ++ +Q G+ + +LQH G +LADEMGLGKT+Q +AV +
Sbjct: 201 RFEKTPFYIENGEMRDYQIRGLNWLISLQHNGINGILADEMGLGKTLQTVAVIGFMKHYK 260
Query: 217 ---WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P L++ P S +W +W PS + L G ++ RN
Sbjct: 261 NASGPHLVIAPKSTLQNWINEFGKWC---PSLKAIALI--------GIAEARADLIRNEI 309
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
L G ++++ SY++VLK +++L ++ ++ DE+H +KN +K + K+++ L
Sbjct: 310 LPGKWDVLVTSYEMVLKEKSLLRKYAWQYLVIDEAHRIKNEHSKLSEIVREF--KSRHRL 367
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PD++ ++ + + + G + LH ++K
Sbjct: 368 LITGTPLQNNLHELWALLNFLLPDMFALASDFDSWFTTNDMMGNQDLVA---RLHKVLKP 424
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK DV L K+ ++++ ++ K R+ Y L ++++VV G K K+ +
Sbjct: 425 -FLLRRLKSDVEKSLLPKKEVKIYVGLS-KMQREWYTKILMKDIDVVNGAGKLEKAR--I 480
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFA 493
++ + N Y D AE P D L + E G + LIF+
Sbjct: 481 MNILMHLRKCCNHPYLFDGAEPGPPYTTDQHLVDNSGKMVLLDKLLVKLKEQGSRVLIFS 540
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + + R+DG T RQ + EF + D K +L+ +AGG+G+
Sbjct: 541 SMSRMLDLLEDYCWWRSYRYCRLDGQTVHDERQKSIDEFNKPDSDKFIFMLTTRAGGLGI 600
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
LTAA VI + W P +QA DRAHRIGQ V V+ + ++TVD+ + + KL
Sbjct: 601 NLTAADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNTVDERIIERAEMKL 659
>gi|221058248|ref|XP_002261632.1| DNA helicase [Plasmodium knowlesi strain H]
gi|194247637|emb|CAQ41037.1| DNA helicase, putative [Plasmodium knowlesi strain H]
Length = 1506
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 232/512 (45%), Gaps = 69/512 (13%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWP 218
L E ++P I+ +LP+Q + V F + GRIL+ADEMGLGKT+QAI + FR ++P
Sbjct: 599 LEEIKKKLPRRIQKVILPYQLESVYFFKKQNGRILIADEMGLGKTLQAICILHFFR-LYP 657
Query: 219 VLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
LI+TPSSL+L+WA I+++L P++++VV G SN + R + +
Sbjct: 658 TLIVTPSSLKLNWACEIEKFLPAFDPAKVLVV----GDSN---------DFPRGTRIYRI 704
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK----KAQYALLL 333
I+S+++ KL +++ NFK++I DESHF++ Q + + +IK K + + L
Sbjct: 705 I-IVSFELYRKLAHLINQINFKLIIVDESHFIRTVQYGKQSQLAKMIKGTLRKTKKVIFL 763
Query: 334 SGTPALSRPIELFKQLEALYPD---VYKNVHEYGNRYCKGGVF---GIYQGASNHEELHN 387
SGTP+++RPI ++ Q++ L + KN +G +CK I++ E H
Sbjct: 764 SGTPSINRPINIYHQIKYLINNKKIFCKNKFTFGEEFCKKYFCRGEKIFEENLRSWEFHL 823
Query: 388 LMKATVMIRRLKKDVL-AQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSE 446
+K TVMIRR DV + P +R V+L M ++ +V C
Sbjct: 824 FLKKTVMIRRSISDVFTSNFPDLKRFFVYLPHGSHTMD------KDDQVNFFSSSPCAPS 877
Query: 447 EEVQSLKFTEKNLINKIYTDS---------------AEAKIPAVLDYLETVIEA------ 485
EE +++ T K+ + DS E K V + L V+ A
Sbjct: 878 EEGNAIQSTGKDSEEILSADSDFATPNRQALSEFFHVEIKTKKVEEGLSKVVHAMKYMER 937
Query: 486 ---GCKFLIFAHHQPMLDAIHQLFLK----KK------VHCIRIDGGTPPASRQALVTEF 532
G K +IF +H + I + LK KK V + ++G ++ + F
Sbjct: 938 HFPGKKKIIFCYHLNVCKCIEEELLKMIKRKKQTEQAIVDYVVLNGNLSEKEKREKIQFF 997
Query: 533 QEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYY 592
+ + + ++ + GL T + F E L Q E R R Q V+Y
Sbjct: 998 RMNHSCQYGIFTICSVSHGLDFTFCNLCFFLEFPINFFHLQQCESRLFRKNQQFDTYVFY 1057
Query: 593 LLANDTV--DDIVWDVVRSKLENLGQVLDGHE 622
L + + D W + +LDG E
Sbjct: 1058 FLLKNGLGSDYKTWRRFMLCAHSTRSILDGTE 1089
>gi|196234384|ref|ZP_03133212.1| Non-specific serine/threonine protein kinase [Chthoniobacter flavus
Ellin428]
gi|196221576|gb|EDY16118.1| Non-specific serine/threonine protein kinase [Chthoniobacter flavus
Ellin428]
Length = 897
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 170/577 (29%), Positives = 262/577 (45%), Gaps = 79/577 (13%)
Query: 85 NIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENL-- 142
IA YD L AF ++P+ A E++ P+ + + EI+ +E L
Sbjct: 228 EIAVHVRYDGELRLAF-ELPRKLSPAAEKILG---PWRERFAQTIEEIAELFTALEALEA 283
Query: 143 -------HPLVQRAIASASAAPDLREKYDQI----PAH------IESKLLPFQRDGVRFA 185
+P + IA A L E+ QI AH ++++LLP+Q DG+ FA
Sbjct: 284 AHEPVVVYPDAEERIAQALHQRRLSEQVAQIRKNPAAHPLRSSLLKTELLPYQLDGIAFA 343
Query: 186 LQHGGRILLADEMGLGKTIQAIAVATCFR---DVWPVLILTPSSLRLHWAAMIQQWLNIP 242
GR +LADEMGLGKTIQ + VA + VLI+ P+SL+ WAA I ++
Sbjct: 344 -AGAGRAVLADEMGLGKTIQGVGVAEFLAREAGISRVLIVCPASLKSQWAAEIGRF---- 398
Query: 243 PSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL-DG-LFNIISYDVVLKLQNILMSSNFKI 300
R I N +RN +G F + +Y+ VL+ + + + +
Sbjct: 399 -------------CGRGVRLISGRNAERNAQYAEGEFFTVCNYEQVLRDYLAVERTPWDL 445
Query: 301 VIADESHFLKNAQAKRTAATLPIIK--KAQYALLLSGTPALSRPIELFKQLE-----ALY 353
+I DE+ +KN +AK T +IK ++++AL+L+GTP +R +LF +E L
Sbjct: 446 IILDEAQRIKNWEAK----TSHVIKSLRSRFALVLTGTPVENRIDDLFSIVEFIDDRRLG 501
Query: 354 PDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQ 413
P ++ H + G V G A+ + L A V++RR + V +P R
Sbjct: 502 P-AFRFFHTHRTASETGKVLGYKNLAALRQRL-----APVLLRRTRSSVALDVPT--RTT 553
Query: 414 VFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSA----- 468
+ +A D Q+ L+VV I K E+ L+ ++ DS
Sbjct: 554 EIVRIAPTD-EQLALHNSNLQVVVA-ITRKKFISEMDLLRLRRALAACRMAADSTFLVDK 611
Query: 469 -EAKIPAVLDYLETVIEAGC-----KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPP 522
E + L+ L ++ A C K ++F+ MLD I + +R+DG P
Sbjct: 612 TEPGYSSKLERLGELLAALCAEPERKIIVFSEWTTMLDLIETQLKNLRAKFVRLDGSVPQ 671
Query: 523 ASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
A R+ LV EFQ+ + L+ AG GL L AA TVI +L W P L Q RAHR+
Sbjct: 672 ARRKQLVAEFQDNPQCRV-FLTTNAGSTGLNLQAADTVINVDLPWNPALLEQRIARAHRM 730
Query: 583 GQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
GQ V+VY + T+++ + + +K E G VLD
Sbjct: 731 GQKRKVHVYLFVTEKTIEENLLATLGAKHELAGAVLD 767
>gi|312374256|gb|EFR21846.1| hypothetical protein AND_16272 [Anopheles darlingi]
Length = 1024
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 247/500 (49%), Gaps = 57/500 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDV- 216
+++ P +I++ ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ ++V
Sbjct: 118 RFESSPPYIKAGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKNVR 177
Query: 217 ---WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG-SNRSGFTIVSSNTKRNI 272
P +++ P S +W +W PS V L +G R+ F R++
Sbjct: 178 NNHGPHIVIVPKSTLQNWVNEFGRWC---PSLRPVCL--IGDQETRNAFI-------RDV 225
Query: 273 PLDGLFN--IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
+ G ++ I SY++ ++ + + N++ ++ DE+H +KN ++K + L K A
Sbjct: 226 LMPGEWDVCITSYEMCIREKAVFKKFNWRYMVIDEAHRIKNEKSK-LSEILREFKTAN-R 283
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
LLL+GTP + EL+ L L PD++ + ++ + + G S E LH ++K
Sbjct: 284 LLLTGTPLQNNLHELWALLNFLLPDIFNSAEDFDSWFDANQCMG---DNSLIERLHAVLK 340
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
++RRLK +V +L K+ ++F+ ++ K R+ Y L ++++VV G K K
Sbjct: 341 P-FLLRRLKSEVEKRLLPKKEVKIFVGLS-KMQREWYTKILMKDIDVVNGAGKVEKMR-- 396
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LETVIEAGCKFLIF 492
+Q++ + N Y D AE P DY L + E + LIF
Sbjct: 397 LQNILMQLRKCTNHPYLFDGAEPGPPYTTDYHLLENSGKMVVLDKLLRKLQEQESRVLIF 456
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVG 551
+ MLD + + H R+DG TP R ++ ++ D K +LS +AGG+G
Sbjct: 457 SQMTRMLDILEDFCHWRGYHYCRLDGQTPHEDRSNMIADYNAPDSKKFIFMLSTRAGGLG 516
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDV--VRS 609
+ L A VI + W P +QA DRAHRIGQ V V+ L+ +TV++ + + V+
Sbjct: 517 INLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVERAEVKL 576
Query: 610 KLENL----GQVLDGHENSL 625
KL+ L G+++D N L
Sbjct: 577 KLDKLVIQQGRLVDNKTNQL 596
>gi|149198233|ref|ZP_01875280.1| swf/snf family helicase [Lentisphaera araneosa HTCC2155]
gi|149138835|gb|EDM27241.1| swf/snf family helicase [Lentisphaera araneosa HTCC2155]
Length = 1308
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 237/479 (49%), Gaps = 35/479 (7%)
Query: 166 IPAHIESKLLPFQRDGVRF---ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
P + +++L +Q +G ++ + G LAD+MGLGKT+QA+AV + + P L++
Sbjct: 848 FPKNFKAELRSYQEEGFQWLSRMAEWGAGACLADDMGLGKTVQALAVLSARAHLGPSLVV 907
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+S+ +W +Q++ P ++ + S S + N + S
Sbjct: 908 APTSVCGNWQEEVQRF--APMLKVQIYDSTFA---ESAMESLDEND---------LLVCS 953
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
Y ++ + ++ + ++ DE+ +KN Q+ R+ A + ++++ + +GTP + P
Sbjct: 954 YTMLQRDVELISKRQWNGIVLDEAQAIKNPQSGRSKAARSL--ESKFKIATTGTPVENHP 1011
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDV 402
E++ + L P + +G GV G E L ++ ++ RRLKKDV
Sbjct: 1012 GEIWALFDFLNPGYLGSQTSFGKEINSAGVSQAINGLG--ERLRRRVQPFIL-RRLKKDV 1068
Query: 403 LAQLPVKRRQQVFLDVA-EKDMRQIYALFRELEVVK-GKIKACKSE-----EEVQSLK-- 453
L LP R ++ L + D R +Y R + GK +++ EE+ L+
Sbjct: 1069 LKDLP--ERTEINLRIPLSPDERGVYNGLRARASDRLGKRGGDRNDKFFILEEITRLRQA 1126
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHC 513
+L++K ++D + AK+ ++ ++ + EAG + L+F+ LD + + ++ V
Sbjct: 1127 ACSPSLLDKQFSDQS-AKLKRFIELVKELKEAGHRALVFSQFTSFLDLVEKALAEEDVDF 1185
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
+R+DG TP R LV +FQ ++S+KAGG GL LTAA+ VI + W P
Sbjct: 1186 LRLDGSTPAKKRPQLVKKFQVGKS-SVFLISLKAGGFGLNLTAANYVIHLDPWWNPAVED 1244
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
QA DRAHRIGQ +V VY L++ T+++ + + SK E +L S ++S+ ++
Sbjct: 1245 QATDRAHRIGQEKAVTVYRLISEGTIEEKILKLHESKRELADFMLGNQNQSAKMSADEL 1303
>gi|206602042|gb|EDZ38524.1| Putative helicase, Snf2 family [Leptospirillum sp. Group II '5-way
CG']
Length = 1049
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 232/488 (47%), Gaps = 49/488 (10%)
Query: 170 IESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDVWP---VLILT 223
+ +L +Q+ GV + L + G +LADEMGLGKT+ ++ + D P VLI+
Sbjct: 574 FQGQLRVYQKQGVGWLLRLREKGLHGILADEMGLGKTVTTLSFLSHILDGQPGAAVLIVV 633
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+SL +W ++Q+L N+P + QL G + P +GL + +
Sbjct: 634 PASLVYNWEKEVRQFLPNVPCTIYHGSQRQLAGPD--------------FPANGLV-VTT 678
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
Y V L F +VI DE+ +KN ++ + A + + + L LSGTP +
Sbjct: 679 YGTVRNDIGFLSDRRFSMVILDEAQTIKNPESGISLAVSRL--RGDFRLALSGTPLENNL 736
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNL--MKATVMIRRLKK 400
++L+ L+P + + + RY +G ++Q E + L + + +++RR KK
Sbjct: 737 VDLWSLFRFLFPGLLGSRKFFEERYVQGKGSPLWQ----KERIGWLRTLVSPLVLRRTKK 792
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLI 460
DVLA LP K +++ E++ A+ L + K +I+A + + + L
Sbjct: 793 DVLADLPEKTVVDHWVEPGEEERTAYRAI---LLMGKEEIRAVSKDRKTFRMNMLALLLR 849
Query: 461 NKIYT-------DSAEAKIPAVLDYLETV------IEAGCKFLIFAHHQPMLDAIHQLFL 507
+++ + +PA +LET+ + G + L+F+ MLD + L
Sbjct: 850 LRLFCCHPDLVPNPKGISVPAPAKFLETLAKIREALADGHRILLFSQFTGMLDILENALL 909
Query: 508 KKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVL--SMKAGGVGLTLTAASTVIFAEL 565
K + R+DG TP RQ LV EFQ + +V S+KAGGVGLTLT A V +
Sbjct: 910 KDGILFSRLDGKTPLKERQRLVEEFQRQKPGSPSVFLSSLKAGGVGLTLTNADFVFHYDP 969
Query: 566 SWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL-DGHENS 624
W P QA DR+HRIGQ V VY +L TV++ V + KLE V+ +G +
Sbjct: 970 WWNPQVENQATDRSHRIGQKRPVFVYRMLTRGTVEEKVKALKEEKLELFDLVMGEGQPVA 1029
Query: 625 LEVSSSQI 632
E S Q+
Sbjct: 1030 QEWLSRQL 1037
>gi|440296382|gb|ELP89209.1| helicase, putative [Entamoeba invadens IP1]
Length = 948
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 149/511 (29%), Positives = 245/511 (47%), Gaps = 44/511 (8%)
Query: 163 YDQIPAHIE-SKLLPFQRDGVRFALQH---GGRILLADEMGLGKTIQAIAVATCFRDVW- 217
++ P +I+ K+ PFQ D + + ++ G +LADEMGLGKT++ I++ V
Sbjct: 95 FENSPPYIKCGKMKPFQIDALNWLIRRHHLGVNSILADEMGLGKTLETISLLGYLYHVQD 154
Query: 218 ---PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSN-TKRNIP 273
P L+++P S +W +Q+WL PS + + +GG+ S T +
Sbjct: 155 VHGPHLVVSPKSTIDNWRKEVQKWL---PS---ISVGLMGGTKESRDECKKECFTGNKLT 208
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
+D L + SY VVLK +N+L F +I DE+H KN Q + I +A + L L
Sbjct: 209 VDVL--VCSYQVVLKEKNLLRKQKFVYLILDEAHSAKNEQTQFYDGLSEI--RAAHKLFL 264
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYG-NRYCKGGVFGIYQGASNHEELHNLMKAT 392
+GTP + EL+ L+ L P +++ G + F Y G+ + + +K
Sbjct: 265 TGTPLQNTLHELWALLQFLLPGIFRISQLDGIFDSIESEKFERYIGS-----IRDFIKP- 318
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY---ALFRELEVVKGK--IKACKSEE 447
M+RRLK DV +LP K+ ++F+ + E ++I+ L ++ + G+ IK +
Sbjct: 319 FMLRRLKSDVQKELPPKKEIKLFVPLTE--FQRIWYKKVLMGDITTIIGERVIKTKLNNT 376
Query: 448 EVQSLKFTEKNLI----------NKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQP 497
+Q K + + N + ++ AK+ ++ L+ I+ K L+F+
Sbjct: 377 MMQLRKVCDHPYLMPGAEPEPYENGDHICNSSAKMIVMMKLLDKHIKNKGKVLVFSQMTR 436
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD-DVKAAVLSMKAGGVGLTLTA 556
MLD I K++ RIDG T R + +F D V +LS ++GG+G+ L +
Sbjct: 437 MLDIIDDYLYFKEIEHYRIDGQTQQDLRVEQIDDFNNPDGKVNVFLLSTRSGGLGINLQS 496
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A TVI + W P IQA DRAHRIGQ V VY L+A T ++ + V KL
Sbjct: 497 ADTVILYDSDWNPQSDIQAMDRAHRIGQTKPVTVYRLIAEKTAEERLIRVAERKLMLNQL 556
Query: 617 VLDGHENSLEVSSSQIRSSPAKQKTLDSFLK 647
V+ + + E + + Q+ L+S LK
Sbjct: 557 VMQSGKTARETTMGKEEFQQIMQQELNSCLK 587
>gi|25144179|ref|NP_498468.2| Protein ISW-1 [Caenorhabditis elegans]
gi|21264515|sp|P41877.2|ISW1_CAEEL RecName: Full=Chromatin-remodeling complex ATPase chain isw-1;
AltName: Full=Nucleosome-remodeling factor subunit isw-1
gi|351062670|emb|CCD70709.1| Protein ISW-1 [Caenorhabditis elegans]
Length = 1009
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 232/478 (48%), Gaps = 49/478 (10%)
Query: 163 YDQIPAHIES-KLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFR---- 214
+D+ P +IE+ ++ +Q G+ + +LQH +LADEMGLGKT+Q I++ +
Sbjct: 120 FDKSPFYIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKN 179
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P S +WA ++W P VV++ N+ R++ L
Sbjct: 180 KASPHLVIVPKSTLQNWANEFKKW--CPSINAVVLIGDEAARNQ---------VLRDVIL 228
Query: 275 DGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
F++ +Y+++LK++ L N++ +I DE+H +KN ++K + + ++ LL
Sbjct: 229 PQKFDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVREL--NSENRLL 286
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
++GTP + EL+ L L PD++ + ++ + + + G + LH +++
Sbjct: 287 ITGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSNDAMSG---NTDLVQRLHKVLQP- 342
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEVQ 450
++RR+K DV L K+ +V++ ++ K R+ Y L ++++++ G K K+ +
Sbjct: 343 FLLRRIKSDVEKSLLPKKEVKVYVGLS-KMQREWYTKVLMKDIDIINGAGKVEKAR--LM 399
Query: 451 SLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAH 494
++ + +N Y D AE P D L E G + LIF+
Sbjct: 400 NILMHLRKCVNHPYLFDGAEPGPPFTTDQHLVDNSGKMVVLDKLLMKFKEQGSRVLIFSQ 459
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLT 553
MLD + + R+DG TP R + + D K +L+ +AGG+G+
Sbjct: 460 FSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGIN 519
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
L A VI + W P +QA DRAHRIGQ V V+ L+ +TVD+ + + +KL
Sbjct: 520 LATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKL 577
>gi|402832027|ref|ZP_10880691.1| SNF2 family N-terminal domain protein [Capnocytophaga sp. CM59]
gi|402279715|gb|EJU28493.1| SNF2 family N-terminal domain protein [Capnocytophaga sp. CM59]
Length = 952
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 145/516 (28%), Positives = 246/516 (47%), Gaps = 78/516 (15%)
Query: 138 EIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQH---GGRILL 194
E+ L P+ A S +P+L+ + L P+QR+GV++ LQH G L
Sbjct: 450 ELPELRPMAPMAEVQYSPSPNLK-----------ATLRPYQREGVQWLLQHHYNGLGACL 498
Query: 195 ADEMGLGKTIQAIAVATCFRDVWP----------------------VLILTPSSLRLHWA 232
AD+MGLGKT+Q IA+ D P LI+ PSSL +W
Sbjct: 499 ADDMGLGKTLQTIALLVHIHDSLPERENPFPTSIFDLGKPQKEALKCLIIMPSSLLFNWY 558
Query: 233 AMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQ 290
I+++ P + +Q G +R + SN ++I+ SY +VL+
Sbjct: 559 EEIKRF---APH---LSCTQYVGLDRKNKALRLSN----------YDIVLSSYPIVLRDA 602
Query: 291 NILMSSNFKIVIADESHFLKNAQAK--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQ 348
+L +F+ +I DES +KN +K +T +TL KA++ + LSGTP + +L+ Q
Sbjct: 603 KLLERYSFRYIILDESQRIKNNNSKIFKTISTL----KAEHKISLSGTPIENSLSDLWAQ 658
Query: 349 LEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPV 408
++ + P++ + ++ N+Y + + + + EEL ++ + ++RR K+ VL LP
Sbjct: 659 MQFINPNILGSYSQF-NKYFRTEIEKKHNPIA-LEELKGII-SPFLLRRTKQQVLQDLPD 715
Query: 409 KRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDS- 467
Q + ++E + +E V+ ++ +E + ++K N++ K+ S
Sbjct: 716 MEEQIAYCPMSETQEKWYE---QEKSKVRNQLLHIDTEADPAAVKLNTLNMLTKLRQISN 772
Query: 468 ------AEAKIPA-----VLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRI 516
+++IP+ V +LE + AG K L+F+ L K+K + +
Sbjct: 773 HPRLVDPQSEIPSGKYEEVTSHLEQLWRAGQKALVFSSFVSHLAIYEDWCQKEKFKYVSL 832
Query: 517 DGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAE 576
G T RQ V +FQ DV +S+KAG VGL LTAAS V+ + W P QA
Sbjct: 833 TGATSLEGRQRAVEQFQNNQDVSFFFISLKAGEVGLNLTAASYVLLLDPWWNPFSERQAI 892
Query: 577 DRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
RAHR+GQ VNV ++ +T+++ + + +SK E
Sbjct: 893 GRAHRMGQQHKVNVIRFVSRNTLEEKIIHLQQSKKE 928
>gi|227529368|ref|ZP_03959417.1| SNF2 helicase associated domain protein [Lactobacillus vaginalis ATCC
49540]
gi|227350725|gb|EEJ41016.1| SNF2 helicase associated domain protein [Lactobacillus vaginalis ATCC
49540]
Length = 1173
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 226/473 (47%), Gaps = 36/473 (7%)
Query: 165 QIPAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
++P +++ L P+Q+ G R+ ++G LLADEMGLGKTIQ I++ ++
Sbjct: 706 KVPGMLQATLRPYQKAGFRWLAMLAKYGFGGLLADEMGLGKTIQIISLILNNYHDGQSIV 765
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
+TP+++ +W ++ PS + VL RS FT SS K I I
Sbjct: 766 ITPAAVIYNWQ---NEFAKFAPSLTLQVLDGSKAERRSLFT--SSRDKDVI-------IT 813
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSR 341
SY + + +F I DE+ ++KN Q + A + ++AL +GTP ++
Sbjct: 814 SYGAFKRDVDFYQDYHFNNEIIDEAQYIKNPQTAASKAVKSVAADHRFAL--TGTPIENQ 871
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKD 401
EL+ + L P N ++ Y + Q +EL L++ ++ RRLKKD
Sbjct: 872 LSELWSIFDFLMPGFLNNYSQFRKNYESPII--KRQDRKAEDELKKLIQPFIL-RRLKKD 928
Query: 402 VLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE----------EVQS 451
VL +LP K V+ + + + A R +VK ++++ EE E+
Sbjct: 929 VLKELPDKTEHLVYTPMIGQQAKLYQA--RATRLVK-RLQSQDDEEFKNNRFEMLAEITR 985
Query: 452 LK--FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKK 509
L+ L+N Y + K+ ++ + I AG K L+F+ L + Q K+
Sbjct: 986 LRQLCCSPKLLNADYRGRS-GKVDQTMELIRDEIAAGHKILLFSQFTSALAILRQRIEKE 1044
Query: 510 KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTP 569
++ I+G T + RQA V EF + ++S+KAGG GL LT+A VI + W
Sbjct: 1045 QISDFVIEGKTKKSDRQAFVKEFNTYNGPAIFLISLKAGGTGLNLTSADVVIHFDPWWNV 1104
Query: 570 GDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
QA DRAHRIGQ +V++Y ++A DT+++ + + + K E +L G E
Sbjct: 1105 AAENQATDRAHRIGQQHNVSIYKMIAKDTIEERIIAMQKQKSELANAILSGDE 1157
>gi|441500800|ref|ZP_20982950.1| hypothetical protein C900_05783 [Fulvivirga imtechensis AK7]
gi|441435443|gb|ELR68837.1| hypothetical protein C900_05783 [Fulvivirga imtechensis AK7]
Length = 827
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 235/487 (48%), Gaps = 40/487 (8%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRD---VWPVL 220
D I++KL P+Q +GV FA + GR L+AD+MGLGKTIQAIA A + + L
Sbjct: 217 DYFDTLIKAKLFPYQIEGVTFAAK-AGRCLIADDMGLGKTIQAIATAEWMKKELHISRAL 275
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL----DG 276
I+ P+SL+ W A I+++ + S T++ N+ + D
Sbjct: 276 IVCPTSLKYQWKAEIEKFTD------------------STATVIEGNSLKREKFYKEDDS 317
Query: 277 LFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
++I+SY+VV IL S +VI DE+ +KN + K + ++ YA++L+GT
Sbjct: 318 FYHILSYNVVANDVEILNRSIPDLVILDEAQRIKNWKTKVAHGVKKL--ESPYAVVLTGT 375
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIR 396
P ++ EL+ ++ + P + + + G G + ++ L+ + ++IR
Sbjct: 376 PLENKLEELYSIVQFVEPFRLGALFRFLEEHQVADDTGKVVGYRDLNKISQLL-SDIVIR 434
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMR--QIYALFRELEVVKGKIKACKSEEEVQSLKF 454
R KK VL QLP + + +F+ + E+ M Q Y+ K + SE++ Q L
Sbjct: 435 RTKKKVLKQLPERMDKNLFVPMTERQMEVHQDYSDLAAKIAKKWRTYGFLSEQDRQRLLL 494
Query: 455 T---EKNLINKIYTDSAEA----KIPAVLDYLETVIE-AGCKFLIFAHHQPMLDAIHQLF 506
+ + + N Y E K+ ++ L+ V+E K ++F+ + M +
Sbjct: 495 SLNCMRMVCNSTYILDQETRHDTKVDELMSILDEVLEDPDQKVVVFSQWERMTRLVAAEL 554
Query: 507 LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELS 566
K+ + ++G P R+AL F KD LS AGGVGL L AAS +I +L
Sbjct: 555 DKRHIEYENLNGSVPSEKRKALFDNFN-KDPESRVFLSTDAGGVGLNLQAASWLINLDLP 613
Query: 567 WTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
W P L Q R +R+GQ +VN+ +++ T++ + DV+ K +LD ++S+
Sbjct: 614 WNPAVLEQRIARIYRLGQKKNVNIINMVSTGTIEHKMLDVLSFKSSLAKGILDNGDDSIF 673
Query: 627 VSSSQIR 633
+ S+ +
Sbjct: 674 MEESRFK 680
>gi|302386693|ref|YP_003822515.1| SNF2-like protein [Clostridium saccharolyticum WM1]
gi|302197321|gb|ADL04892.1| SNF2-related protein [Clostridium saccharolyticum WM1]
Length = 1047
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 155/545 (28%), Positives = 256/545 (46%), Gaps = 59/545 (10%)
Query: 96 LVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASA 155
LV P A N RL + +L S +L E SG + + L+ V R + S
Sbjct: 519 LVEGLSADPDA-LNKTYRLPKYRALYLDS---ILKEGSGITLYRDQLYKAVVRGMKSVED 574
Query: 156 APDLREKYDQIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAV- 209
+ D +IP + L +Q+ G R+ + GG +LAD+MGLGKTIQ IA+
Sbjct: 575 S-DF-----EIPKPLRQVLRGYQKTGYRWLKTLDSYGFGG--ILADDMGLGKTIQVIALL 626
Query: 210 --ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSN 267
++ LI+ P+SL +W + P ++V V Q G ++
Sbjct: 627 LDEAGKKEHTTSLIVCPASLVYNWENEFH--IFAPSLKVVTVTGQAGERE----ALLMHK 680
Query: 268 TKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKA 327
+ ++ I SYD++ + ++ S F+ I DE+ ++KNA + A I
Sbjct: 681 GEEDVL------ITSYDLLKRDIDLYKSRFFRFQIIDEAQYIKNASTQSARAVKSIDAGN 734
Query: 328 QYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHN 387
++AL +GTP +R EL+ + L P ++ Y + V Q + E LH
Sbjct: 735 RFAL--TGTPIENRLSELWSIFDFLMPGFLFTYRKFKKEYEQPIVRD--QEQTVLESLHR 790
Query: 388 LMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-----LFRELEVVKGKIKA 442
L+ ++RRLKKDVL +LP K V+ V +K+ +++Y L +ELE ++ +
Sbjct: 791 LI-GPFLLRRLKKDVLKELPDKLETIVY-SVFDKEQKELYTANAFLLKQELERLEDR--- 845
Query: 443 CKSEEEVQSLKFTEKNLINKIYTD---------SAEAKIPAVLDYLETVIEAGCKFLIFA 493
+ + +Q L + + +I D AK+ +D + +E G K L+F+
Sbjct: 846 -RGRDNIQILAALTR--LRQICCDPHLCYNNYKGESAKLETCMDLIRNGVEGGHKILLFS 902
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLT 553
ML+ + Q K+ V + G TP R +V F++ D++ ++S+KAGG GL
Sbjct: 903 QFTSMLEIMEQRLKKEAVPYYMLTGATPKEERLHMVNSFKD-DEIPLFLISLKAGGTGLN 961
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLEN 613
LTAA VI + W QA DRAHRIGQ V+V+ L+ +T+++ + + SK +
Sbjct: 962 LTAADVVIHFDPWWNVAAQNQATDRAHRIGQEKQVSVFKLITKNTIEENILKLQESKKDL 1021
Query: 614 LGQVL 618
Q++
Sbjct: 1022 AEQII 1026
>gi|423336292|ref|ZP_17314040.1| putative SNF2 family DNA helicase [Lactobacillus reuteri ATCC 53608]
gi|337729492|emb|CCC04622.1| putative SNF2 family DNA helicase [Lactobacillus reuteri ATCC 53608]
Length = 1161
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 136/474 (28%), Positives = 229/474 (48%), Gaps = 38/474 (8%)
Query: 165 QIPAHIESKLLPFQRDGVRFAL-----QHGGRILLADEMGLGKTIQAIAVATCFRDVWPV 219
++PA++ + L P+Q DGV++ + GG LLADEMGLGKT+Q I V +
Sbjct: 694 KVPANLHATLRPYQYDGVQWLITLMKYHFGG--LLADEMGLGKTLQIITVLLSEQGNGQN 751
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
LI+ P+++ +W I ++ P V VL R F + +T R+I
Sbjct: 752 LIVAPAAVIYNWQDEINKF---APDLKVTVLDGSKAERRKQF---AQSTGRDII------ 799
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
I SYD + + F I + DE+ ++KN Q I K ++AL +GTP
Sbjct: 800 ITSYDAAKRDIDFYEGHLFNIEVIDEAQYIKNPQTAAAKTVKAINAKQRFAL--TGTPIE 857
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLK 399
+R EL+ + L P + + ++ +Y +G + Q ++L L++ M+RRLK
Sbjct: 858 NRLSELWSIFDYLMPGLLGSYQQFRKQY-EGPIIK-NQDEQAQDDLKRLVQP-FMLRRLK 914
Query: 400 KDVLAQLPVKRRQQVFLDVAEKDMRQIYA-----LFREL------EVVKGKIKACKSEEE 448
+DVL LP+K +QVFL ++Y L R++ E + K+
Sbjct: 915 QDVLNDLPMKN-EQVFLTPMVGKQERLYQARAQRLIRQIQKQNDKEFQQNKLAVLAEITR 973
Query: 449 VQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLK 508
++ L + + L+++ Y+ KI A ++ ++ + K L+F+ L + +
Sbjct: 974 LRELCCSPQ-LLDRGYS-GPSGKIKATMNLIKDEMADNHKILLFSQFTSALAILKEKLAN 1031
Query: 509 KKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWT 568
+ I+G T A R V EF D ++S+KAGG GL LT+A VI + W
Sbjct: 1032 AGIKYFVIEGKTKKADRLQFVDEFNSYDQPAVFLISLKAGGTGLNLTSADVVIHFDPWWN 1091
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
QA DRAHRIGQ ++V +Y ++A +T+++ + ++ + K +L G+E
Sbjct: 1092 IAAENQATDRAHRIGQKNNVTIYKMIAQNTIEEKIIEMQQKKAALANSILSGNE 1145
>gi|432097421|gb|ELK27660.1| Zinc finger Ran-binding domain-containing protein 3 [Myotis
davidii]
Length = 319
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 128/239 (53%), Gaps = 48/239 (20%)
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK DVL QLP K RQ + D+
Sbjct: 1 MIRRLKTDVLTQLPPKIRQCIPFDLP---------------------------------- 26
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
SA AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 27 -------------SAAAKAGAVKDYIKMMLQNDSLKFLVFAHHLLMLQACTEAVIENKTR 73
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
+RIDG P + R LV +FQ+ + + A+LS++A G GLT TAA+ V+FAEL W PG +
Sbjct: 74 YVRIDGSVPSSERIHLVNQFQKDPETRVAILSIQAAGQGLTFTAATHVVFAELYWDPGHI 133
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ 631
QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K++ G L+G + L+ +
Sbjct: 134 KQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKVQVTGSTLNGRKERLQAEEGE 192
>gi|334350211|ref|XP_001373609.2| PREDICTED: probable global transcription activator SNF2L1
[Monodelphis domestica]
Length = 1153
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 245/500 (49%), Gaps = 57/500 (11%)
Query: 162 KYDQIPAHIESKLL-PFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATC---FR 214
+++ P++++ L +Q G+ + + ++G +LADEMGLGKT+Q IA+ +R
Sbjct: 156 RFEVSPSYVKGGTLRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYR 215
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-RSGFTIVSSNTKRNI 272
++ P ++L P S +W ++W+ PS V L +G + R+ F R++
Sbjct: 216 NIPGPHMVLVPKSTLHNWMNEFKRWV---PSLRAVCL--IGDKDARAAFI-------RDV 263
Query: 273 PLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
+ G +++ SY++V+K +++ N++ ++ DE+H +KN ++K + K
Sbjct: 264 MMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF--KTTNR 321
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
LLL+GTP + EL+ L L PDV+ + ++ + + G ++ E LH ++K
Sbjct: 322 LLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDHKLV---ERLHAVLK 378
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
++RR+K +V LP K+ +++L ++ K R+ Y L ++++++ K K
Sbjct: 379 P-FLLRRIKAEVEKSLPPKKEVKIYLGLS-KMQREWYTRILMKDIDILNSAGKMDKMR-- 434
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIF 492
+ ++ + N Y D AE P D L + E G + LIF
Sbjct: 435 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLVNNSGKMVALDKLLSKLKEQGSRVLIF 494
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVG 551
+ +LD + + + R+DG TP R+ + F + K +LS +AGG+G
Sbjct: 495 SQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSTKFIFMLSTRAGGLG 554
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ L A VI + W P +QA DRAHRIGQ V V+ L+ ++TV+D + + KL
Sbjct: 555 INLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEDRIVERAEIKL 614
Query: 612 E------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 615 RLDSIVIQQGRLIDQQSNKL 634
>gi|328699200|ref|XP_001946170.2| PREDICTED: chromatin-remodeling complex ATPase chain Iswi-like
[Acyrthosiphon pisum]
Length = 1051
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 250/506 (49%), Gaps = 55/506 (10%)
Query: 155 AAPDLREKYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAV- 209
AA ++D+ P +I++ +L +Q G+ + + ++G +LADEMGLGKT+Q I++
Sbjct: 140 AADKFITQFDESPYYIQNGELRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLL 199
Query: 210 --ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSS 266
+R++ P +++ P S +W ++W P V ++ G + +
Sbjct: 200 GYMKHYRNIPGPHMVIVPKSTLQNWVNEFKKW--CPTIRTVCMI----GDRDTRVKFIRE 253
Query: 267 NTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKK 326
IP D I SY++++ + +L ++ ++ DE+H +KN ++K + II++
Sbjct: 254 TF---IPGDWDVCITSYEMIICERAVLRKIQWRYLVIDEAHRIKNEKSKLSE----IIRE 306
Query: 327 AQYA--LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE 384
+ LLL+GTP + EL+ L L PDV+ + ++ + FG + E
Sbjct: 307 FETTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSDDFDQWFNTNNCFG---DNALIER 363
Query: 385 LHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKA 442
LH +++ ++RRLK +V +L K+ +V++ ++ K R+ Y L ++++VV G K
Sbjct: 364 LHAVLRP-FLLRRLKAEVEKRLKPKKEVKVYVGLS-KLQREWYTKVLMKDIDVVNGAGKV 421
Query: 443 CKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAG 486
K +Q++ + N Y D E P D L+ + E
Sbjct: 422 EKMR--LQNILMQLRKCSNHPYLFDGVEPGPPYTTDEHIVFNCGKMVVFDKLLKALKEQD 479
Query: 487 CKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSM 545
+ L+F+ M+D + K + R+DG TP RQ + E+ E + K +LS
Sbjct: 480 SRVLVFSQMTRMMDILEDYMHWKGYNYCRLDGQTPHEDRQRQINEYNEPNSKKFVFILST 539
Query: 546 KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWD 605
++GG+G+ L A VI + W P +QA DRAHRIGQ V V+ L+ +TV++ + +
Sbjct: 540 RSGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVE 599
Query: 606 V--VRSKLENL----GQVLDGHENSL 625
V+ +L+ L G+++D +N+L
Sbjct: 600 RAEVKLRLDKLVIQQGRLMDNQKNTL 625
>gi|430813641|emb|CCJ29016.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1408
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 162/567 (28%), Positives = 251/567 (44%), Gaps = 108/567 (19%)
Query: 166 IPAHIESKLLPFQRDGV-------RFALQHGGRILLADEMGLGKTIQAIAVATC------ 212
IPA I++ L +Q++GV R+ L HG +L D+MGLGKT+Q+I +
Sbjct: 819 IPACIKANLRKYQQEGVNWLAFLNRYQL-HG---ILCDDMGLGKTLQSICIIASDHFSKS 874
Query: 213 ------FRDVWPV--LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIV 264
F++ P+ LI+ P +L HW + + I GGS +
Sbjct: 875 QEHESEFKEFQPIPSLIICPPTLSRHWQHEFSTYAPFMKTLIY------GGSPSERIKLR 928
Query: 265 SSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPII 324
S + ++ I SYD+ N+ + DE H +KNA+AK T A I
Sbjct: 929 DSFEEYDVV------ITSYDICRNDSEEFSKRNWNYCVLDEGHIIKNAKAKLTKAIKLI- 981
Query: 325 KKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE 384
KA Y L+LSGTP + +EL+ + L P + R+ K S+ E+
Sbjct: 982 -KANYRLILSGTPIQNNILELWSLFDFLMPGFLGTQKSFHERFVKPITASRDSKVSSREQ 1040
Query: 385 ------LHNLMKATV--MIRRLKKDVLAQLPVKRRQQVFLDVA--EKDMRQIYALFRELE 434
L L K + ++RRLK+DVL LP K Q + D++ +K + + +A + E
Sbjct: 1041 EAGALALEALHKQVLPFLLRRLKEDVLDDLPPKIIQDYYCDLSPIQKQLYEDFAKTQISE 1100
Query: 435 VVKGKIKACKSEEE---VQSLKFTEKN------LINKIYTDSAEAKI------------- 472
V+K + K K E++ Q+L++ K ++NK + + I
Sbjct: 1101 VIK-RFKGEKIEKKSHIFQALQYMRKLCNSPALVLNKKHPQYEKINIELQKQNSNIYDIE 1159
Query: 473 --PAVLDYLETVIEAG-C-------------KFLIFAHHQPMLDAIHQLFLKK---KVHC 513
P ++ +++ G C + LIF + MLD I KK V
Sbjct: 1160 HSPKLMALRNLLLDCGICLNDDTLGIQANQHRALIFCQLKDMLDMIENQVFKKLLPNVLY 1219
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
+R+DG T R + +F + +L+ GG+GL LT A TVIF E W P +
Sbjct: 1220 LRLDGDTDAKQRYEIAHKFNSDFSIDVLLLTTHVGGLGLNLTGADTVIFVEHDWNPMKDL 1279
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL---------ENLG-------QV 617
QA DRAHRIGQ + VNVY L+ T+++ + + R KL +N G Q+
Sbjct: 1280 QAMDRAHRIGQKNVVNVYRLVTKGTLEEKIMSLQRFKLNIASSIINQQNFGLSTMDTSQI 1339
Query: 618 LDGHENSLEVSSSQIRSSPAKQKTLDS 644
LD + SS +++S +K LDS
Sbjct: 1340 LDLFSTIQDEQSSDVQNS-SKMDILDS 1365
>gi|409201852|ref|ZP_11230055.1| SNF2-like protein [Pseudoalteromonas flavipulchra JG1]
Length = 1401
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 144/526 (27%), Positives = 251/526 (47%), Gaps = 49/526 (9%)
Query: 142 LHPLVQRAIASASAAPDLR---------EKYDQ-------IPAHIESKLLPFQRDGVRFA 185
HPL IA A+ ++ EK Q +P+ ++++L +Q+ G +A
Sbjct: 886 FHPLAAPLIAEATTGMRMKTLPAWEEQNEKMQQAVALTPALPSTLQAELRDYQQAGFDWA 945
Query: 186 LQ---HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIP 242
++ G LAD+MGLGKTIQA+A+ +V P L++ P+S+ +W IQ++
Sbjct: 946 MRLAHWGAGACLADDMGLGKTIQALAMILARANVGPTLVIAPTSVCFNWQQEIQKF---A 1002
Query: 243 PSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVI 302
P+ V + S S+ + SN + PLD + I+SY ++ + +IL F+ ++
Sbjct: 1003 PTLSVKLFSDYPHSDARAEML--SNLQ---PLDCV--ILSYGLLQREVDILKPIAFETIV 1055
Query: 303 ADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHE 362
ADE+ LKN AKRT A + K ++ L+ +GTP + EL+ + P + N+
Sbjct: 1056 ADEAQALKNPLAKRTQAACAL--KGKFKLITTGTPIENNLTELWSLFRFVNPGLLGNLKR 1113
Query: 363 YGNRYCKGGVFGIYQGASNHEELHNL--MKATVMIRRLKKDVLAQLPVKRRQQVFLDVAE 420
+ ++ + H L + ++RR+K VL +LP + V + +++
Sbjct: 1114 FSEKFSAPIENANEDKLAAHRARKGLKHLIQPFILRRMKHQVLTELPPRTEINVPIQLSQ 1173
Query: 421 KDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDS-------AEAKIP 473
++ + Y R+ + +I ++ +F + ++ AE++I
Sbjct: 1174 EE-QTFYEALRQNAI--DEISQSTQQDSANEQRFKMLAALTRLRQACCHPKLLMAESQIT 1230
Query: 474 ----AVLDYLETVI-EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQAL 528
A LD L T + E K LIF+ L I K+ + +DG TP +RQ
Sbjct: 1231 SSKLAALDELLTELQENNHKALIFSQFVGHLQLIKARLEKRGIRFQYLDGSTPSKARQQA 1290
Query: 529 VTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSV 588
V FQ K + + ++S+KAGG GL LTAA VI + W P QA DRAHR+GQ V
Sbjct: 1291 VNAFQ-KGEGEVFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEEQASDRAHRMGQTRPV 1349
Query: 589 NVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRS 634
+Y L+A T+++ + ++ K + Q+L + +++ + + S
Sbjct: 1350 TIYRLIAKGTIEEQIVELHHHKKDLADQLLANTDKVMKLDVNDVLS 1395
>gi|168061453|ref|XP_001782703.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162665796|gb|EDQ52468.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 2113
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 251/534 (47%), Gaps = 58/534 (10%)
Query: 131 EISGYNVEIENLHPLVQRAIASASAAPDLREKY------DQI--------PAHIESKLL- 175
E +G E EN H +Q AI+ +L EK DQ+ P +I +L
Sbjct: 819 EYNGSTWEEENNHEDMQEAISKFIERHNLAEKRACTDQADQVIAPAITEQPKYISGGVLH 878
Query: 176 PFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR----DVWPVLILTPSSLR 228
+Q G+++ L Q ++LADEMGLGKTIQA++ + PVL++ P S
Sbjct: 879 DYQLQGLKWLLSNFQQRKSVILADEMGLGKTIQAVSFIMALKYENLSNKPVLVIGPKSTL 938
Query: 229 LHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK 288
+ W QW +++ V+ Q +R+ T+ IPL + + SYD+ +
Sbjct: 939 VGWEQEFGQW----GADLNTVIYQGDKESRTMIRNYEFFTREKIPLFDVL-VTSYDLAML 993
Query: 289 LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQ 348
++L ++ +I DE H +KN ++K L +KA + LLL+GTP + ELF
Sbjct: 994 DSSLLEKMDWACIIVDEGHRVKNTRSK--LGILLRRQKADFRLLLTGTPVQNTLTELFAL 1051
Query: 349 LEAL----YPDVYKNVHEYGNRYCKGGVFGIYQGASNHE--ELHNLMKATVMIRRLKKDV 402
L L +PD ++ E+ G +G + + LH L+ M+RRLK DV
Sbjct: 1052 LHFLDPVEFPDPERSAQEFSQVDALSGAGSKGEGGVDQQVSRLHKLLTPR-MLRRLKADV 1110
Query: 403 L-AQLPVKR-----------RQQVFLDVAEKDMRQI-----YALFRELEVVKGKIKACKS 445
+ +P K+ ++ ++ + +K+ +Q+ R L + +K +
Sbjct: 1111 MQGMIPGKKYVEVLCALTPLQRHLYGAILKKNYKQLNRGNTTGKKRSLNFILMDLKMVCN 1170
Query: 446 EEEVQSLKFTEKNLINKIYT--DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
+ K E ++++ +A K+ + L + E G + L+F+ + MLD +
Sbjct: 1171 HPYLFPGKEPEHGDADELFRLLITASGKLQVLAKLLPRLKEGGHRVLLFSQMKSMLDILE 1230
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD-DVKAAVLSMKAGGVGLTLTAASTVIF 562
RIDG TP + RQ + +F + DV ++S +AGG+G+ L +A TVI
Sbjct: 1231 DFLSHLDYKFCRIDGSTPASGRQKQIADFNSANSDVFIFLISTRAGGLGINLPSADTVII 1290
Query: 563 AELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL--ENL 614
+ + P +QA+ RAHRIGQ + V VY L+ +V++ + + R KL ENL
Sbjct: 1291 YDPDFNPFVDLQAQARAHRIGQRNVVLVYQLITKCSVEEKITERSRQKLAMENL 1344
>gi|405972247|gb|EKC37026.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
[Crassostrea gigas]
Length = 2123
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 141/515 (27%), Positives = 234/515 (45%), Gaps = 67/515 (13%)
Query: 146 VQRAIASASAAPDLREKYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMG 199
+Q + + + DLR+K+++ PA+I++ L P+Q +GV R++ +G +LADEMG
Sbjct: 649 IQVKMPPSYPSTDLRKKWEKQPAYIDATGGTLHPYQLEGVNWLRYSWSNGTDTILADEMG 708
Query: 200 LGKTIQAIAVATCF----RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG 255
LGKTIQ I P L+ P S ++W + W + + V++ +G
Sbjct: 709 LGKTIQTIVFLQSLYQEGHSKGPFLVSAPLSTIINWEREFEFW-----APDLYVVTYIGD 763
Query: 256 SN-----------------RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNF 298
+ RSG +S K + + + SY+++ L S ++
Sbjct: 764 KDCRSVIREHEFSFEENAIRSG--AKASKLKSDCQVKFHVLLTSYELISIDSACLGSVDW 821
Query: 299 KIVIADESHFLKNAQAK--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDV 356
+++ DE+H LKN Q+K R + I Y LLL+GTP + ELF L L PD
Sbjct: 822 AVLVVDEAHRLKNNQSKFFRILSNYKI----GYKLLLTGTPLQNNLEELFHLLNFLSPDK 877
Query: 357 YKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFL 416
+ ++ + + F ++LH+++ ++RRLK DVL +P K V +
Sbjct: 878 FNDLTVFLDE------FADIAKEDQVKKLHDML-GPHLLRRLKADVLKGMPSKSEFIVRV 930
Query: 417 DVAEKDMRQI-YALFRELEVVKGK--------------IKACKSEEEVQSLKFTEKNLIN 461
+++ + Y L R + + K K C + L N
Sbjct: 931 ELSPMQKKYYKYILTRNFDALNSKGGNQVSLLNIMMDLKKCCNHPYLFPTASNDAPKLPN 990
Query: 462 KIYTDSAEAKIPAVLDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRID 517
+Y +A K L+ L ++ E G + LIF+ MLD + + RID
Sbjct: 991 GMYEGTAMTKACGKLELLSNMMKKLKEKGHRLLIFSQMTKMLDILEDFLEYEGYKYERID 1050
Query: 518 GGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAE 576
GG + RQ + F D + A +LS +AGG+G+ L A TVI + W P + IQA
Sbjct: 1051 GGITGSMRQDAIDRFNAPDAPQFAFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAF 1110
Query: 577 DRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
RAHRIGQ + V +Y + ++V++ + V + K+
Sbjct: 1111 SRAHRIGQANKVMIYRFVTRNSVEERITQVAKKKM 1145
>gi|182625182|ref|ZP_02952958.1| DNA/RNA helicase, SNF2 [Clostridium perfringens D str. JGS1721]
gi|177909641|gb|EDT72075.1| DNA/RNA helicase, SNF2 [Clostridium perfringens D str. JGS1721]
Length = 1069
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 139/490 (28%), Positives = 236/490 (48%), Gaps = 64/490 (13%)
Query: 166 IPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
+P + ++L P+Q++G ++ L GG +LAD+MGLGKT+Q IA + ++
Sbjct: 588 VPKALNAELRPYQKEGFKWINEITDLGFGG--VLADDMGLGKTLQIIAFLLSQKKSKSIV 645
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRS----------GFTIVSSNTKR 270
++ P+S+ +W +++ PS I V L S R G I N K
Sbjct: 646 VV-PTSVIYNWMDEFEKF---APS-IRVGLVHGSKSKRDKVLRDFKRGLGIKIEEENLKE 700
Query: 271 NIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPI 323
+ YDV+L L + +F I DE+ +KN A+ T + I
Sbjct: 701 K-------SYEKYDVLLTTYGTLKNDEKAYENLSFDYCIIDEAQNIKNPVAQATLSVKNI 753
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE 383
K++ + L+GTP + +EL+ + + P + R+ SN
Sbjct: 754 --KSRCNIALTGTPIENNLMELWSIFDFVMPGYLFTKERFRERFI--------LDESNLS 803
Query: 384 ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC 443
EL +L+ ++RRLK+DVL++LP K ++ +++ K +Q+Y+ + ++ +K ++
Sbjct: 804 ELKSLI-TPFILRRLKEDVLSELPEKLEKKYLVEMKGK-QKQLYSFY--VKAIKNQLNEN 859
Query: 444 KSEEEVQSLKFTEKNLINKI-------------YTDSAEAKIPAVLDYLETVIEAGCKFL 490
KS E+ K + K+ YT +K+ V + ++ E+G K L
Sbjct: 860 KSSEKSGRDKINLFAYLTKLREICLDPSLVVPDYT-GGSSKLTVVKEIVKDASESGKKIL 918
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGV 550
+F+ +L I + F K + + +DGGT R V +F E ++K ++S+KAGGV
Sbjct: 919 LFSQFTSVLQKIEEDFKKDDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGV 978
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
GL LT+AS VI + W P QA DRAHR GQ + V V L+ANDT+++ + + K
Sbjct: 979 GLNLTSASVVIHFDPWWNPAVEDQATDRAHRFGQENKVEVIKLVANDTIEEKIVLMQEDK 1038
Query: 611 LENLGQVLDG 620
E + ++DG
Sbjct: 1039 RELIQSLMDG 1048
>gi|403372559|gb|EJY86178.1| hypothetical protein OXYTRI_15831 [Oxytricha trifallax]
Length = 982
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 221/493 (44%), Gaps = 46/493 (9%)
Query: 157 PDLREKYDQ-IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRD 215
P +R K ++ +P I +L FQRDG+ ++ GRIL+ D+ G GK++QA+ ++ +R+
Sbjct: 454 PTVRLKLEEFLPPLIYRQLYSFQRDGIMKGIKFNGRILINDDFGTGKSLQALGLSIAYRN 513
Query: 216 VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
WP+LIL P + W I +WL P +I NR + N K+
Sbjct: 514 EWPLLILCPRFCQYMWRYEILKWL--PGYDI----------NR---IQIIRNDKQEFTSQ 558
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
II YD+ + + + FK+ IADE K + K + +I K + +LL+G
Sbjct: 559 FQMVIIPYDIAATIPVRIENFGFKVCIADEVQLFKQRETKTNKILIELISKMKRVILLTG 618
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKAT 392
+ +P E++ ++ + PD+ +E+G RYC + GI + A N EL L+
Sbjct: 619 SNLTKKPQEIYSMMKMVRPDIMPGFYEFGYRYCDPRQSFDGIDFSNAGNMIELKQLLDKR 678
Query: 393 VMIRRLKKDVLAQLP---------------VKRRQQVFLD------VAEKDM----RQIY 427
+ +K V +LP + + QQ+ L+ V D+
Sbjct: 679 IQTIFKRKYVFNELPDIVRQKLEVHCETSIIVKMQQLLLNYVVPREVQNPDLSFFEEMFL 738
Query: 428 ALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC 487
F+ + V+ K ++ S + + + +Y S +AK+ A + ++ ++E G
Sbjct: 739 TYFQTPDKVQSKFLCDPIDDSKLSFQKSLVQIFRDLYDYSGQAKLKATYEVIDNILENGM 798
Query: 488 KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKA 547
+ LIF +H + AI L KV + + +Q + +F E D KA ++ +
Sbjct: 799 RVLIFGYHLYFITAIED-HLTSKVKFLYLGKNVDTDYKQDICQKFNEDDSYKAVLIDLSE 857
Query: 548 GGVGLTLTAASTVI-FAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDV 606
+ +TVI FAE W + +AE G S+ NV YL T+D+ ++ +
Sbjct: 858 DLSDIQFLTPNTVILFAETFWNWDYMEKAESLIVTPGMKSANNVIYLFGRYTLDEYIFKL 917
Query: 607 VRSKLENLGQVLD 619
+ + L Q L+
Sbjct: 918 LYRQNNELYQQLE 930
>gi|327273932|ref|XP_003221733.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like [Anolis
carolinensis]
Length = 1036
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 251/513 (48%), Gaps = 59/513 (11%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 138 LTESSKTTNVCTRFEASPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 197
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W ++W +P V ++ R+ F
Sbjct: 198 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRW--VPTLRAVCLIGD--KEQRAAF 253
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 254 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 306
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 307 VREF--KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNCLGDQKLV 364
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K +V LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 365 ---ERLHLVLRP-FLLRRIKAEVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 419
Query: 438 --GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------L 479
GK+ + + ++ + N Y D AE P D L
Sbjct: 420 SAGKLDKMR----LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLL 475
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
+ E G + LIF+ +LD + + + R+DG TP RQA + + E K
Sbjct: 476 PKLKEQGSRILIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSK 535
Query: 540 AA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++T
Sbjct: 536 FVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNT 595
Query: 599 VDDIVWDVVRSKLE------NLGQVLDGHENSL 625
V++ + + KL G+++D + N L
Sbjct: 596 VEERIVERAEMKLRLDSIVIQQGRLVDQNLNKL 628
>gi|172087300|ref|XP_001913192.1| TBP-associated factor 172 [Oikopleura dioica]
gi|48994300|gb|AAT47874.1| TBP-associated factor 172 [Oikopleura dioica]
Length = 1665
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 233/503 (46%), Gaps = 55/503 (10%)
Query: 165 QIPAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAI-AVAT----CFRDV 216
+IP +KL P+Q+DGV + + + G +L+DEMGLGKT+Q I VA+ C ++
Sbjct: 1097 KIPIPFAAKLRPYQQDGVNWLMFLNKFGLNGILSDEMGLGKTLQTILTVASDHYRCTQNG 1156
Query: 217 ---WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
+I++P S+ HW +++++ P + ++ G+ R + + +
Sbjct: 1157 EKNVKSIIISPPSVTGHWYDEVKKFV---PESLSMIHYYGNGAERKKLRELFMSAENQ-- 1211
Query: 274 LDGLFN--IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
FN I SY+VV + + + DE H ++N + K + + I +A++ L
Sbjct: 1212 ----FNAVIASYEVVRNDIDFFNKYTWNYCVLDEGHVIRNTKTKVSQSIRSI--RARHRL 1265
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE----LHN 387
+L+GTP + IEL+ + L P E+ Y + + N E L N
Sbjct: 1266 MLTGTPIQNSVIELWSLFDFLMPGFLGTDKEFNTVYGRPILNSRDPRCKNPEAGLLALQN 1325
Query: 388 LMKATV--MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKS 445
L + + M+RR+K DVL LP K Q + +++ R +Y F ++ K +I+
Sbjct: 1326 LHRQCLPFMLRRVKSDVLKDLPPKIIQDFYCELSPLQKR-LYEEFTRSKL-KKRIEEVID 1383
Query: 446 EEEVQSLKFTEKNLINKIYTD-----SAEAKI---PAVLDYLETVIEAGC---------- 487
+E + + I TD S+ I P + + + E G
Sbjct: 1384 DERKDTSERAAHPDYQSIMTDLDRNGSSIRDIEHAPKIKALKQLLTECGIGQRNGSVVSE 1443
Query: 488 -KFLIFAHHQPMLDAIHQLFLKKK----VHCIRIDGGTPPASRQALVTEFQEKDDVKAAV 542
+ LIF H+ MLD I + K V R+DG P +R +V+ F + +
Sbjct: 1444 HRALIFCQHKSMLDIIERDLFKSNQLPSVSFSRLDGSVPAGARHGIVSRFNRDPTIDVLL 1503
Query: 543 LSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDI 602
L+ K GG+GL LT A VIF E W P +QA DRAHRIGQ +VNVY L+ +TV++
Sbjct: 1504 LTTKVGGLGLNLTGADVVIFVEHDWNPQMDLQAMDRAHRIGQKKTVNVYRLITRNTVEEK 1563
Query: 603 VWDVVRSKLENLGQVLDGHENSL 625
+ + + KL ++ G S+
Sbjct: 1564 IMGLQKFKLSIANSLVSGDNASM 1586
>gi|324502629|gb|ADY41155.1| DNA excision repair protein ERCC-6, partial [Ascaris suum]
Length = 1156
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 136/486 (27%), Positives = 223/486 (45%), Gaps = 55/486 (11%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQ-H----GGRILLADEMGLGKTIQAIAVATC------- 212
++P +KL +Q+ GVR+ + H GG +LADEMGLGKTIQ I
Sbjct: 256 RVPNVCWNKLFKYQKTGVRWLSELHEQCVGG--ILADEMGLGKTIQVICFLRALAFSQAE 313
Query: 213 -----FRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSN 267
FR + PVL++ P++L W W P I V+ S + +
Sbjct: 314 TRGFGFRGLGPVLLICPTTLMHQWLKEFHNWF--PLCRIAVLHSSGCFRGPQSHLLSKFS 371
Query: 268 TKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKA 327
T R DG + SY K + L ++N+ VI DE H ++N A+ T A + +
Sbjct: 372 TYRK---DGCTLLTSYSTFTKKRKALANANWHYVILDEGHKIRNPGAQMTRAVKEV--RT 426
Query: 328 QYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHN 387
+ L+L+G+P + EL+ ++ +YP + + ++ G Y AS +
Sbjct: 427 PHRLILTGSPLQNSLKELWSLMDFVYPGRLGALQTFTEKFAIPITQGGYANASAIQVRTA 486
Query: 388 LMKATVM--------IRRLKKDV--LAQLPVKRRQQVFLDV--AEKDMRQIYALFREL-E 434
A V+ +RR+KKDV QLP K Q +F ++ ++ + Y RE
Sbjct: 487 YKCACVLRDAINPYILRRMKKDVEMTVQLPSKTEQVLFCNITPCQRTFYKDYISSRECAR 546
Query: 435 VVKGKIKA----------CKSEEEVQSL--KFTEKNLINKIYTDSAEAKIPAVLDYLETV 482
++ G + A C + V K E N+ D A + L+ +
Sbjct: 547 ILAGGMDAFVGLITLRKLCNHPDLVTGGPNKHNEYNVTLDEEMDFGAASRSGKMIVLKAL 606
Query: 483 I----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDV 538
+ + K L+F+ + ML + + +K+ +R+DG TP SRQ LV +F +D+
Sbjct: 607 LKLWKDQNQKVLLFSQSRQMLTLLEKFVIKEGYEYLRMDGSTPIGSRQPLVEKFNTNEDI 666
Query: 539 KAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
+L+ K GG+G+ LT A+ V+ + W P +QA +RA RIGQ +V VY LL + T
Sbjct: 667 FLFLLTTKVGGLGVNLTGANRVVIFDPDWNPSTDVQARERAWRIGQERAVTVYRLLTSGT 726
Query: 599 VDDIVW 604
+++ ++
Sbjct: 727 IEEKIY 732
>gi|392542695|ref|ZP_10289832.1| SNF2-like protein [Pseudoalteromonas piscicida JCM 20779]
Length = 1401
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 144/526 (27%), Positives = 251/526 (47%), Gaps = 49/526 (9%)
Query: 142 LHPLVQRAIASASAAPDLR---------EKYDQ-------IPAHIESKLLPFQRDGVRFA 185
HPL IA A+ ++ EK Q +P+ ++++L +Q+ G +A
Sbjct: 886 FHPLAAPLIAEATTGMRMKTLPAWEEQNEKMQQAVGLTPTLPSTLQAELRDYQQAGFDWA 945
Query: 186 LQ---HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIP 242
++ G LAD+MGLGKTIQA+A+ +V P L++ P+S+ +W IQ++
Sbjct: 946 MRLAHWGAGACLADDMGLGKTIQALAMILARANVGPTLVIAPTSVCFNWQQEIQKF---A 1002
Query: 243 PSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVI 302
P+ V + S S+ + SN + PLD + I+SY ++ + +IL F+ ++
Sbjct: 1003 PTLSVKLFSDYPHSDARAEML--SNLQ---PLDCV--ILSYGLLQREVDILKPIAFETIV 1055
Query: 303 ADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHE 362
ADE+ LKN AKRT A + K ++ L+ +GTP + EL+ + P + N+
Sbjct: 1056 ADEAQALKNPLAKRTQAACAL--KGKFKLITTGTPIENNLTELWSLFRFVNPGLLGNLKR 1113
Query: 363 YGNRYCKGGVFGIYQGASNHEELHNL--MKATVMIRRLKKDVLAQLPVKRRQQVFLDVAE 420
+ ++ + H L + ++RR+K VL +LP + V + +++
Sbjct: 1114 FSEKFSAPIENANEDKLAAHRARKGLKHLIQPFILRRMKHQVLTELPPRTEINVPIQLSQ 1173
Query: 421 KDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDS-------AEAKIP 473
++ + Y R+ + +I ++ +F + ++ AE++I
Sbjct: 1174 EE-QTFYEALRQNAI--DEISQSTQQDSANEQRFKMLAALTRLRQACCHPKLLMAESQIT 1230
Query: 474 ----AVLDYLETVI-EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQAL 528
A LD L T + E K LIF+ L I K+ + +DG TP +RQ
Sbjct: 1231 SSKLAALDELLTELQENNHKALIFSQFVGHLQLIKARLEKRGIRFQYLDGSTPSKARQQA 1290
Query: 529 VTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSV 588
V FQ K + + ++S+KAGG GL LTAA VI + W P QA DRAHR+GQ V
Sbjct: 1291 VNAFQ-KGEGEVFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEEQASDRAHRMGQTRPV 1349
Query: 589 NVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRS 634
+Y L+A T+++ + ++ K + Q+L + +++ + + S
Sbjct: 1350 TIYRLIAKGTIEEQIVELHHHKKDLADQLLANTDKVMKLDVNDVLS 1395
>gi|392311297|ref|ZP_10273831.1| SNF2-like protein [Pseudoalteromonas citrea NCIMB 1889]
Length = 1398
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 238/480 (49%), Gaps = 33/480 (6%)
Query: 166 IPAHIESKLLPFQRDGVRFA--LQH-GGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
+P+ +++ L +Q DG +A L H G LAD+MGLGKT+QA+AV P L++
Sbjct: 923 VPSTLQATLRDYQIDGFDWASRLAHWGAGACLADDMGLGKTLQALAVLLDRAKDGPSLVI 982
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+S+ +W +Q+ PS +++L+ L S + + P D + +IS
Sbjct: 983 APTSVCFNW---LQEACKFAPSLNMILLADLKSSAERATMLNALQ-----PFDCV--VIS 1032
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
Y ++ + +L + ++ ++ADE+ LKN AKR+ A + K + L+ +GTP +
Sbjct: 1033 YGLLQRESELLQALTWRTIVADEAQALKNPLAKRSIAACAL--KGDFKLITTGTPIENNL 1090
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI----YQGASNHEELHNLMKATVMIRRL 398
EL+ + P + N+ + R+ + I +L NL++ ++ RR+
Sbjct: 1091 SELWSLFRFVNPGLLGNLKRFSARFSTP-IEAIKDDPIAAKKARTKLKNLIQPFIL-RRM 1148
Query: 399 KKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKN 458
K VL +LP + + + +++++M +Y R+ + + + + Q +K +
Sbjct: 1149 KHQVLTELPARTDINIKVQLSDEEMA-LYEALRQSAIDNLTQSSSQDQPGAQRIKMLAEL 1207
Query: 459 LINK--------IYTDSA--EAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLK 508
+ + + TD+ AK+ A+ L+ + E K LIF+ L I Q
Sbjct: 1208 IKLRQACCNPALVLTDNTIPSAKLTALDKLLDELQENNHKALIFSQFVGHLQLIKQHLDA 1267
Query: 509 KKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWT 568
+ V+ +DG TP RQ V FQ+ ++S+KAGG GL LTAA VI + W
Sbjct: 1268 RGVNYQYLDGSTPNKQRQLRVNAFQQGGG-DVFLISLKAGGSGLNLTAADYVIHMDPWWN 1326
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
P QA DRAHR+GQ V +Y L+A+DT+++ + + + K + +L G++ + ++S
Sbjct: 1327 PAVEEQASDRAHRMGQQRPVTIYRLIASDTIEEKIVALHQHKRDLAQTLLSGNDQTSKLS 1386
>gi|315650529|ref|ZP_07903595.1| Snf2 family helicase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315487184|gb|EFU77500.1| Snf2 family helicase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 1142
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 142/476 (29%), Positives = 229/476 (48%), Gaps = 44/476 (9%)
Query: 167 PAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAV---ATCFRDVWP 218
P + + L +Q++G ++ L GG +LAD+MGLGKT+Q I++ A +
Sbjct: 674 PDEVINVLRGYQKEGFKWLRSVEELGFGG--ILADDMGLGKTLQVISLLIDAKQNGRLTK 731
Query: 219 VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
LI+ P+SL +W+ I ++ N E ++ +S L + + N +I
Sbjct: 732 ALIVCPASLVYNWSEEISKFDN----ENILKVSVLAAAKEERQKSLEENEDVDIY----- 782
Query: 279 NIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPA 338
I SYD + + ++ F I DE+ F+KN A + ++AL +GTP
Sbjct: 783 -ISSYDTLRRDISLYHDMRFSHQIIDEAQFIKNQNTGVAKAVKAVQADVKFAL--TGTPI 839
Query: 339 LSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRL 398
+R EL+ + + P + + RY V G + +L + M A ++RRL
Sbjct: 840 ENRLSELWSIFDYIMPGFLYSYTAFRTRYENDIV---KTGNEDSAKLLSKMIAPFVLRRL 896
Query: 399 KKDVLAQLPVK----------RRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEE 448
K +V LP K R+QQ+ D ++++I ++ K + A E
Sbjct: 897 KSEVALDLPDKIEEVRVSRFDRKQQLAYDGELSNLKKILLGDKDYNNKKMIVLA-----E 951
Query: 449 VQSLK--FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLF 506
+ L+ + NLI Y+ + AK+ +D +++ IEAG K L+F+ MLD I + F
Sbjct: 952 ITKLRQICCDPNLIFDDYSGES-AKLDTCIDLVKSGIEAGHKILLFSQFSSMLDIISKRF 1010
Query: 507 LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELS 566
K+K+ I G TP R LV +F DD ++S+KAGG GL LT A VI +
Sbjct: 1011 EKEKITSFMITGSTPKDKRLTLVNKFNH-DDTNVFLISLKAGGTGLNLTGADIVIHYDPW 1069
Query: 567 WTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
W QA DRAHRIGQ ++V VY L+A T+++ + + SK + +VL+ E
Sbjct: 1070 WNFAAQNQATDRAHRIGQKNTVTVYRLIAKGTIEERIVKLQESKKDLADRVLNFEE 1125
>gi|261337693|ref|ZP_05965577.1| SNF2 family protein [Bifidobacterium gallicum DSM 20093]
gi|270277134|gb|EFA22988.1| SNF2 family protein [Bifidobacterium gallicum DSM 20093]
Length = 1221
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 151/492 (30%), Positives = 242/492 (49%), Gaps = 57/492 (11%)
Query: 166 IPAHIESKLLPFQRDGVRFAL----QHGGRILLADEMGLGKTIQAIAV---ATCF----- 213
+PA + + L P+Q +G R+ +H G IL AD+MGLGKT+Q I+V AT
Sbjct: 748 VPAALHATLRPYQLEGYRWLRTLMDKHLGGIL-ADDMGLGKTVQMISVLVDATAREQQES 806
Query: 214 ----RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTK 269
R P L++ P+SL +WA ++ N P V V++ R K
Sbjct: 807 IQEQRQPDPCLVVCPASLVYNWA---RELRNFAPDLPVSVVAGAKAQRR----------K 853
Query: 270 RNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQ- 328
+ L G+ + SYDV + L + +++ DE+ +KN K A +K+AQ
Sbjct: 854 QYADLTGVV-VTSYDVFRLDIDDLADQRWLVMVLDEAQAIKNPATKIAQA----VKRAQA 908
Query: 329 -YALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHN 387
+ L+GTP +R EL+ + L P + + + Y K + G A + LH+
Sbjct: 909 RHRFALTGTPIENRLSELWSIFDFLMPGFLGSYRSFRDTYEKPMLDGRDDVA---QRLHH 965
Query: 388 LMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA-EKDMRQIYALF-RELEVV--------K 437
++ ++ RRLK+DVL LP K + +DVA + R++YA R+L ++ +
Sbjct: 966 AVRPFIL-RRLKRDVLTDLPEK--TESVIDVALTGEQRKLYAASERKLRMMLQSSQDMNE 1022
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQP 497
+ + + +++ L + + + A AK+ A+ + + E+G K LIF+
Sbjct: 1023 DRFQVLSALTQLRQLCCDPRLVFENV--SHAGAKMDAIAELVTAARESGQKVLIFSQFVS 1080
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
LD I + + V + I G TP R LV F DD ++S+KAGG GL LT A
Sbjct: 1081 FLDLIADMLDELGVAHMAITGSTPKQRRLELVDTFN-MDDTPVMLISLKAGGTGLNLTGA 1139
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
S VI A+ W QA DRAHRIGQ +VNVY ++A+DTV++ + + K E L +
Sbjct: 1140 SVVIHADPWWNEAAQNQATDRAHRIGQRHTVNVYKIVASDTVEERILGLQERKSE-LART 1198
Query: 618 LDGHENSLEVSS 629
L ++S+ V++
Sbjct: 1199 LLDTQSSVNVAA 1210
>gi|419719866|ref|ZP_14247127.1| SNF2 helicase [Lachnoanaerobaculum saburreum F0468]
gi|383303912|gb|EIC95336.1| SNF2 helicase [Lachnoanaerobaculum saburreum F0468]
Length = 1142
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 142/476 (29%), Positives = 229/476 (48%), Gaps = 44/476 (9%)
Query: 167 PAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAV---ATCFRDVWP 218
P + + L +Q++G ++ L GG +LAD+MGLGKT+Q I++ A +
Sbjct: 674 PDEVINVLRGYQKEGFKWLRSVEELGFGG--ILADDMGLGKTLQVISLLIDAKQNGRLTK 731
Query: 219 VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
LI+ P+SL +W+ I ++ N E ++ +S L + + N +I
Sbjct: 732 ALIVCPASLVYNWSEEISKFDN----ENILKVSVLAAAKEERQKSLEENEDVDIY----- 782
Query: 279 NIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPA 338
I SYD + + ++ F I DE+ F+KN A + ++AL +GTP
Sbjct: 783 -ISSYDTLRRDISLYHDMRFSHQIIDEAQFIKNQNTGVAKAVKAVQADVKFAL--TGTPI 839
Query: 339 LSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRL 398
+R EL+ + + P + + RY V G + +L + M A ++RRL
Sbjct: 840 ENRLSELWSIFDYIMPGFLYSYTAFRTRYENDIV---KTGNEDSAKLLSKMIAPFVLRRL 896
Query: 399 KKDVLAQLPVK----------RRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEE 448
K +V LP K R+QQ+ D ++++I ++ K + A E
Sbjct: 897 KSEVALDLPDKIEEVRVSRFDRKQQLAYDGELSNLKKILLGDKDYNNKKMIVLA-----E 951
Query: 449 VQSLK--FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLF 506
+ L+ + NLI Y+ + AK+ +D +++ IEAG K L+F+ MLD I + F
Sbjct: 952 ITKLRQICCDPNLIFDDYSGES-AKLDTCIDLVKSGIEAGHKILLFSQFSSMLDIISKRF 1010
Query: 507 LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELS 566
K+K+ I G TP R LV +F DD ++S+KAGG GL LT A VI +
Sbjct: 1011 EKEKITSFMITGSTPKDKRLTLVNKFNH-DDTNVFLISLKAGGTGLNLTGADIVIHYDPW 1069
Query: 567 WTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
W QA DRAHRIGQ ++V VY L+A T+++ + + SK + +VL+ E
Sbjct: 1070 WNFAAQNQATDRAHRIGQKNTVTVYRLIAKGTIEERIVKLQESKKDLADRVLNFEE 1125
>gi|171742723|ref|ZP_02918530.1| hypothetical protein BIFDEN_01837 [Bifidobacterium dentium ATCC
27678]
gi|171278337|gb|EDT45998.1| SNF2 family N-terminal domain protein [Bifidobacterium dentium ATCC
27678]
Length = 1283
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 142/481 (29%), Positives = 224/481 (46%), Gaps = 34/481 (7%)
Query: 165 QIPAHIESKLLPFQRDGVRFA---LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
++P + + L P+Q +G R+ G +LADEMGLGK++Q +A+ + P LI
Sbjct: 793 EVPQALRNVLRPYQAEGFRWLSTLWDKGFGGILADEMGLGKSVQLLALVEARKGNGPTLI 852
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVV--------VLSQLGGSNRSGFTIVSSNTKRNIP 273
+ P+SL +WAA +++ E+V VL +L +S + S + +
Sbjct: 853 VCPASLVYNWAAECEKFTADLTVEVVAGTKTERRNVLRRLRAMAKSESSSSSVSEASSES 912
Query: 274 LDGL-FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
DG I SYD++ + + F ++ DE+ ++KN A + A + + A +
Sbjct: 913 EDGPDILITSYDLLRRDIDEYAGCRFACMVLDEAQYIKN-HATKVAKVVKQVNAA-HRFA 970
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
L+GTP +R EL+ + L P + + RY + I + + ++A
Sbjct: 971 LTGTPIENRLSELWSIFDFLMPGLLGTYTRFRERYEQP----ILAPGPEQSVMADKLRAL 1026
Query: 393 VMI---RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEV 449
V + RRLKKDVL LP K V + +A + R++YA E + K ++
Sbjct: 1027 VGLFIKRRLKKDVLTDLPDKFENVVTVKLA-GEQRKLYAA-HEQRLRAALTKTRDADFNT 1084
Query: 450 QSLK-FTEKNLINKIYTD---------SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
++ E L+ ++ D + AK+ A+ D + ++ G K LIF+ L
Sbjct: 1085 SRIRILAEFTLLRELCCDPRLVYADAKNGSAKLEAIDDLVANCMDEGKKVLIFSQFTSFL 1144
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
D I + V I G TP R LV EF DD ++S+KAG GL L AS
Sbjct: 1145 DLIGVRLAEHGVAFHAITGETPKRKRVELVDEFN-GDDAPVFLISLKAGNTGLNLVGASV 1203
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
VI A+ W QA DRAHRIGQ VNVY ++A DT+++ + + R K Q D
Sbjct: 1204 VIHADPWWNEAAQNQATDRAHRIGQTQDVNVYRIVAKDTIEERMLKLQRDKSRLARQFTD 1263
Query: 620 G 620
G
Sbjct: 1264 G 1264
>gi|403337139|gb|EJY67775.1| hypothetical protein OXYTRI_11712 [Oxytricha trifallax]
Length = 1091
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/495 (25%), Positives = 222/495 (44%), Gaps = 50/495 (10%)
Query: 157 PDLREKYDQ-IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRD 215
P +R K ++ +P I +L FQRDG+ ++ GRIL+ D+ G GK++QA+ ++ +R+
Sbjct: 460 PTVRLKLEEFLPPLIYRQLYSFQRDGIMKGIKFNGRILINDDFGTGKSLQALGLSIAYRN 519
Query: 216 VWPVLILTPSSLRLHWAAMIQQWLNIPPSEI--VVVLSQLGGSNRSGFTIVSSNTKRNIP 273
WP+LIL P + W I +WL P +I + ++ S F +V
Sbjct: 520 EWPLLILCPRFCQYMWRYEILKWL--PGYDINRIQIIRNDKQEFTSQFQMV--------- 568
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
II YD+ + + + FK+ IADE K + K + +I K + +LL
Sbjct: 569 ------IIPYDIAATIPVRIENFGFKVCIADEVQLFKQRETKTNKILIELISKMKRVILL 622
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMK 390
+G+ +P E++ ++ + PD+ +E+G RYC + GI + A N EL L+
Sbjct: 623 TGSNLTKKPQEIYSMMKMVRPDIMPGFYEFGYRYCDPRQSFDGIDFSNAGNMIELKQLLD 682
Query: 391 ATVMIRRLKKDVLAQLP---------------VKRRQQVFLD------VAEKDM----RQ 425
+ +K V +LP + + QQ+ L+ V D+
Sbjct: 683 KRIQTIFKRKYVFNELPDIVRQKLEVHCETSIIVKMQQLLLNYVVPREVQNPDLSFFEEM 742
Query: 426 IYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA 485
F+ + V+ K ++ S + + + +Y S +AK+ A + ++ ++E
Sbjct: 743 FLTYFQTPDKVQSKFLCDPIDDSKLSFQKSLVQIFRDLYDYSGQAKLKATYEVIDNILEN 802
Query: 486 GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSM 545
G + LIF +H + AI L KV + + +Q + +F E D KA ++ +
Sbjct: 803 GMRVLIFGYHLYFITAIED-HLTSKVKFLYLGKNVDTDYKQDICQKFNEDDSYKAVLIDL 861
Query: 546 KAGGVGLTLTAASTVI-FAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVW 604
+ +TVI FAE W + +AE G S+ NV YL T+D+ ++
Sbjct: 862 SEDLSDIQFLTPNTVILFAETFWNWDYMEKAESLIVTPGMKSANNVIYLFGRYTLDEYIF 921
Query: 605 DVVRSKLENLGQVLD 619
++ + L Q L+
Sbjct: 922 KLLYRQNNELYQQLE 936
>gi|339242337|ref|XP_003377094.1| chromatin-remodeling complex ATPase chain Iswi [Trichinella
spiralis]
gi|316974135|gb|EFV57661.1| chromatin-remodeling complex ATPase chain Iswi [Trichinella
spiralis]
Length = 1075
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 219/459 (47%), Gaps = 50/459 (10%)
Query: 186 LQHGGRILLADEMGLGKTIQAIAVATCFRDV----WPVLILTPSSLRLHWAAMIQQWLNI 241
L++G +LADEMGLGKT+Q I+ + P L++ P S +W +W
Sbjct: 193 LENGINGILADEMGLGKTLQTISFIGYLKHYKNMPSPHLVICPKSTLPNWVNEFNRWC-- 250
Query: 242 PPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS +VV QL G + I++ +P + SY++ ++ + +L N++ +
Sbjct: 251 -PSIVVV---QLIGDQETRDAIINEKL---MPGKWDVCVTSYEMAIREKCVLRKFNWRYI 303
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + ++ + LLL+GTP + EL+ L L PDV+ +
Sbjct: 304 VIDEAHRIKNEKSKLSEIVRQF--RSSHRLLLTGTPLQNNLHELWALLNFLLPDVFNSSD 361
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA-- 419
++ + FG E LH ++K ++RRLK +V LP K+ ++++ ++
Sbjct: 362 DFDAWFNTSSCFG---DTGLVERLHTVLKP-FLLRRLKSEVEKALPPKKELKIYIGLSKL 417
Query: 420 EKDMRQIYA----------LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSA 468
++D I+ L +++++V G K K+ + ++ + N Y D A
Sbjct: 418 QRDWFVIFCSFSFCMYTKILMKDIDIVNGAGKLEKAR--LLNILMQLRKCCNHPYLFDGA 475
Query: 469 EAKIPAVLD---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHC 513
E P D L + E G + LIF+ MLD + L K+
Sbjct: 476 EPGPPFTTDQHLVDNCGKMVLVDKLLPKLKEQGSRVLIFSQMSRMLDILEDYCLWKQYPY 535
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
R+DG TP RQA + F + K +L+ +AGG+G+ L A VI + W P
Sbjct: 536 CRLDGQTPHQERQASIDAFNAPNSEKFIFMLTTRAGGLGINLATADIVILYDSDWNPQMD 595
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+QA DRAHRIGQ +V V+ L+ +TV++ + + KL
Sbjct: 596 LQAMDRAHRIGQKKTVRVFRLITENTVEERIVERAEIKL 634
>gi|283456215|ref|YP_003360779.1| helicase [Bifidobacterium dentium Bd1]
gi|283102849|gb|ADB09955.1| Helicase [Bifidobacterium dentium Bd1]
Length = 1274
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 142/481 (29%), Positives = 224/481 (46%), Gaps = 34/481 (7%)
Query: 165 QIPAHIESKLLPFQRDGVRFA---LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
++P + + L P+Q +G R+ G +LADEMGLGK++Q +A+ + P LI
Sbjct: 784 EVPQALRNVLRPYQAEGFRWLSTLWDKGFGGILADEMGLGKSVQLLALVEARKGNGPTLI 843
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVV--------VLSQLGGSNRSGFTIVSSNTKRNIP 273
+ P+SL +WAA +++ E+V VL +L +S + S + +
Sbjct: 844 VCPASLVYNWAAECEKFTADLTVEVVAGTKTERRNVLRRLRAMAKSESSSSSVSEASSES 903
Query: 274 LDGL-FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
DG I SYD++ + + F ++ DE+ ++KN A + A + + A +
Sbjct: 904 EDGPDILITSYDLLRRDIDEYAGCRFACMVLDEAQYIKN-HATKVAKVVKQVNAA-HRFA 961
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
L+GTP +R EL+ + L P + + RY + I + + ++A
Sbjct: 962 LTGTPIENRLSELWSIFDFLMPGLLGTYTRFRERYEQP----ILAPGPEQSVMADKLRAL 1017
Query: 393 VMI---RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEV 449
V + RRLKKDVL LP K V + +A + R++YA E + K ++
Sbjct: 1018 VGLFIKRRLKKDVLTDLPDKFENVVTVKLA-GEQRKLYAA-HEQRLRAALTKTRDADFNT 1075
Query: 450 QSLK-FTEKNLINKIYTD---------SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
++ E L+ ++ D + AK+ A+ D + ++ G K LIF+ L
Sbjct: 1076 SRIRILAEFTLLRELCCDPRLVYADAKNGSAKLEAIDDLVANCMDEGKKVLIFSQFTSFL 1135
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
D I + V I G TP R LV EF DD ++S+KAG GL L AS
Sbjct: 1136 DLIGVRLAEHGVAFHAITGETPKRKRVELVDEFN-GDDAPVFLISLKAGNTGLNLVGASV 1194
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
VI A+ W QA DRAHRIGQ VNVY ++A DT+++ + + R K Q D
Sbjct: 1195 VIHADPWWNEAAQNQATDRAHRIGQTQDVNVYRIVAKDTIEERMLKLQRDKSRLARQFTD 1254
Query: 620 G 620
G
Sbjct: 1255 G 1255
>gi|325841031|ref|ZP_08167240.1| SNF2 family N-terminal domain protein [Turicibacter sp. HGF1]
gi|325490097|gb|EGC92440.1| SNF2 family N-terminal domain protein [Turicibacter sp. HGF1]
Length = 1080
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 236/484 (48%), Gaps = 47/484 (9%)
Query: 140 ENLHPLVQRAIASASAAPDLREKYDQI-PAHIESKLLPFQRDGVRF-----ALQHGGRIL 193
E LH + + S L E D I P ++ L +Q+ G R+ Q GG +
Sbjct: 580 ETLHAVRDASFKSMVREFKLVEDADFIVPEPLQKTLRRYQKTGFRWIKTLAKYQMGG--I 637
Query: 194 LADEMGLGKTIQAIAV--ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLS 251
LAD+MGLGKT+Q I+V + P LI+ PSSL +W + I+++ PS V++++
Sbjct: 638 LADDMGLGKTLQIISVLLSEQSESTKPSLIVAPSSLIYNWKSEIEKF---APSLNVLIVT 694
Query: 252 QLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKN 311
G +++++T ++ I SYD++ + + + ++ I DE+HF+KN
Sbjct: 695 ---GEPTVRQDLINTSTDYDVV------ITSYDLIRRDIEVYETQQYRFCILDEAHFIKN 745
Query: 312 AQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGG 371
+ + I + ++AL +GTP + +L+ + + P + + ++ +Y
Sbjct: 746 HTTQNAKSVKRIRSEVRFAL--TGTPIENSLADLWSIFDFILPGYFGSYSQFKKKYEAPI 803
Query: 372 VFGIYQGASNHEELHNLMK-----ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI 426
V H LH L + A ++RRLKKDVL +LP K V+ ++ +
Sbjct: 804 V--------KHHHLHLLTRIHQQVAPFILRRLKKDVLKELPDKIETNVYCEMGKTQRDLY 855
Query: 427 YALF----RELEVVKGKIKACKSEEEVQSLKFTEKNLIN--KIYTDS---AEAKIPAVLD 477
YA+ +E+ ++ +S ++ +L + L +Y ++ AK+ +
Sbjct: 856 YAMLSQMKQEMHHEIEEVGVERSRIKILALLMRLRQLCCHPSLYLENYRGESAKLNLCMQ 915
Query: 478 YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD 537
++ I +G K LIF+ ML+ + + K++ + + G T + R AL +F + DD
Sbjct: 916 LVQDCIASGHKVLIFSQFTSMLEILGRELKAKEIKFLTLTGATKTSDRLALTEQFNQ-DD 974
Query: 538 VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAND 597
K ++S+KAGG GL LT A VI + W QA DRAHR+GQ +V V+ L+ +
Sbjct: 975 TKVFLISLKAGGTGLNLTGADVVIHYDPWWNMSAQNQATDRAHRLGQDKTVQVFKLMVKN 1034
Query: 598 TVDD 601
T+++
Sbjct: 1035 TIEE 1038
>gi|327277378|ref|XP_003223442.1| PREDICTED: probable global transcription activator SNF2L1-like
[Anolis carolinensis]
Length = 1049
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 245/500 (49%), Gaps = 57/500 (11%)
Query: 162 KYDQIPAHIESKLL-PFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATC---FR 214
++++ P++++ L +Q G+ + + ++G +LADEMGLGKT+Q IA+ +R
Sbjct: 161 RFEESPSYVKGGTLRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYR 220
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-RSGFTIVSSNTKRNI 272
++ P ++L P S +W ++W+ PS V L +G + R+ F R++
Sbjct: 221 NIPGPHMVLVPKSTLHNWMNEFKRWV---PSLRAVCL--IGDKDARAAFI-------RDV 268
Query: 273 PLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
+ G +++ SY++V+K +++ N++ ++ DE+H +KN ++K + K
Sbjct: 269 MMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF--KTTNR 326
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
LLL+GTP + EL+ L L PDV+ + ++ + + G + E LH ++K
Sbjct: 327 LLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTKNCLGDQKLV---ERLHAVLK 383
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
++RR+K +V LP K+ +++L ++ K R+ Y L ++++++ K K
Sbjct: 384 P-FLLRRIKAEVEKSLPPKKEVKIYLGLS-KMQREWYTKILMKDIDILNSAGKMDKMR-- 439
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIF 492
+ ++ + N Y D AE P D L + E G + L+F
Sbjct: 440 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLVTNSGKMVALDKLLSKLKEQGSRVLVF 499
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVG 551
+ +LD + + + R+DG TP R+ + F + K +LS +AGG+G
Sbjct: 500 SQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSRKFVFMLSTRAGGLG 559
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ L A VI + W P +QA DRAHRIGQ V V+ L+ ++TV++ + + KL
Sbjct: 560 INLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 619
Query: 612 E------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 620 RLDSIVIQQGRLIDQQSNKL 639
>gi|451821625|ref|YP_007457826.1| superfamily II DNA/RNA helicase SNF2 family [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451787604|gb|AGF58572.1| superfamily II DNA/RNA helicase SNF2 family [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 979
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 142/477 (29%), Positives = 228/477 (47%), Gaps = 63/477 (13%)
Query: 166 IPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
+P +L +Q G ++ L GG +LADEMGLGKTIQ IA + L
Sbjct: 522 LPDDFVGELREYQMRGFKWFKTISELGFGG--ILADEMGLGKTIQTIAFLLSEKSKRS-L 578
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
I+ P+SL +W Q++ P I++V G+ R ++ + N
Sbjct: 579 IVCPTSLIYNWKEEFQKF--APSLNILIV----HGAQR---------------IEEISNS 617
Query: 281 ISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
+YDV+L L S +F I DE +KNA A+ T I K ++AL
Sbjct: 618 SNYDVILTTYGTLRSDINYYEDISFDYCIIDEGQNIKNASAQNTKVIKEIKAKIKFAL-- 675
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV 393
+GTP + EL+ + + P + + ++ I +G N E L L+K +
Sbjct: 676 TGTPIENNLTELWSIFDFVMPGYLYSKEVFQEKF-------ISKGEENLESLKLLIKPFI 728
Query: 394 MIRRLKKDVLAQLP--VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQS 451
+ RR K +V+ +LP V+++ V + A+K + Y ++ VK K+K +++ ++
Sbjct: 729 L-RRTKNEVMKELPDKVEKKLLVEMTAAQKGLYSNY-----VKRVKAKMKD-NNDKRIEI 781
Query: 452 LKFTEK--------NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
L + K +LI + Y D K+ V++ ++ IE G K L+F+ LD I
Sbjct: 782 LSYLTKLRQICLDPSLILEDY-DGGSGKLEVVIELIKEHIETGSKVLLFSQFTSALDKIG 840
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
+ K++++ + G T P R LV EF + VK ++S+KAGG GL LT+A+ VI
Sbjct: 841 ERLNKEEINFFHLQGKTKPKDRIKLVKEFNSSEVVKVFLISLKAGGTGLNLTSANLVIHF 900
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
+ W P QA DRAHRIGQ V V L+A T+++ + + K E + +L G
Sbjct: 901 DPWWNPAVEDQATDRAHRIGQEKEVEVIRLVAKGTIEEKIILLQEDKKELINDILTG 957
>gi|257064183|ref|YP_003143855.1| DNA/RNA helicase [Slackia heliotrinireducens DSM 20476]
gi|256791836|gb|ACV22506.1| DNA/RNA helicase, superfamily II, SNF2 family [Slackia
heliotrinireducens DSM 20476]
Length = 1082
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 234/480 (48%), Gaps = 48/480 (10%)
Query: 167 PAHIESKLLPFQRDGVRFA---LQHGGRILLADEMGLGKTIQAIAVATCFRD----VWPV 219
P + + L P+Q G ++ G +LADEMGLGK++Q I + R P
Sbjct: 614 PIGLNATLRPYQVLGFQWLSGLCDAGFGGILADEMGLGKSLQLITLLLDRRSEARLTGPS 673
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
LI+ P+SL +W A +++ P ++V V S + + + ++ ++
Sbjct: 674 LIVCPASLVYNWKAEFERF--APQLDVVTV------SGTAAERVAARASRADVL------ 719
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
+ SYD++ + S +F + DE+ ++KN QA TA + + A + L+GTP
Sbjct: 720 VTSYDLLRRDIGDYESMHFFCEVLDEAQYIKN-QATITARAVKRLD-ALHRFALTGTPIE 777
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLK 399
+R EL+ + L P + + + +RY + I+ G +N + A ++RRLK
Sbjct: 778 NRLSELWSIFDFLMPGLLGSYKRFRDRYEQP----IFDGDTNVSKRLQSAVAPFILRRLK 833
Query: 400 KDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELE-VVKGKIKACKSEE----------- 447
KDVL LP K ++ + K + L+R E +++ KI + E+
Sbjct: 834 KDVLTDLPEKLESVIYAHLEGKQLE----LYRAHEQMLRQKIASQTDEDMKDGTQKIEVL 889
Query: 448 -EVQSLK--FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
E+ L+ + +L+ Y A AK+ A+ D + + ++AG K L+F+ + LD I
Sbjct: 890 AELMHLRQICCDPHLMTSRYNGPA-AKLDALSDLIGSCMDAGQKMLVFSQFKSFLDIIAD 948
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
++++ I G TP A R LV F DD ++S+KAGG GL LT AS VI A+
Sbjct: 949 RLDEQRIAHFAITGDTPSAKRLELVERFN-ADDTPVFLISLKAGGTGLNLTGASVVIHAD 1007
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 624
W QA DRAHRIGQ V+V+ ++A DT+++ + + +K + Q++ E S
Sbjct: 1008 PWWNAAAQNQATDRAHRIGQTHVVSVHKIIAKDTIEERIMALQDAKRDLAEQIIGATEGS 1067
>gi|340370186|ref|XP_003383627.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Amphimedon
queenslandica]
Length = 1047
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 239/489 (48%), Gaps = 63/489 (12%)
Query: 172 SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAV---ATCFRDV-WPVLILTP 224
K+ +Q G+ + + ++G +LADEMGLGKT+Q IA+ RDV P +++ P
Sbjct: 156 GKMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYMIHLRDVPGPHIVIAP 215
Query: 225 SSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--S 282
S +W ++W PS + + L G+ I+S L G +N++ S
Sbjct: 216 KSTLANWMMEFKRWC---PSIVTICLI---GTQEERARIISEEI-----LPGEWNVVITS 264
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA--LLLSGTPALS 340
Y++VLK + +++ ++ DE+H +KN ++K + I+++ A LLL+GTP +
Sbjct: 265 YEMVLKEKATFKKFSWRYMVIDEAHRIKNEKSKLSE----IVREFNTANRLLLTGTPLQN 320
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKK 400
EL+ L L PD + + ++ + K + + + + LH +++ ++RRLK
Sbjct: 321 NLHELWALLNFLLPDFFDSSEDFDAWFNKSNL----EDSKLVDRLHTVLRP-FLLRRLKS 375
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTE-- 456
DV +LP K+ +V++ ++ K R++Y L ++++VV G K E+V+ L
Sbjct: 376 DVEKKLPPKKETKVYVGLS-KMQRELYTGILLKDIDVVNGVGKM----EKVRLLNILMQL 430
Query: 457 KNLINKIYT-DSAEAKIPAVLD-----------YLETVI----EAGCKFLIFAHHQPMLD 500
+ N Y D AE P D LE ++ G + LIF MLD
Sbjct: 431 RKCCNHPYLFDGAEPGPPYTTDSHIVYNCGKLSLLEKLLPRLQSEGSRVLIFCQMTRMLD 490
Query: 501 AIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAAVLSMKAGGVGLTLTAAST 559
+ L K+ R+DG T + RQ + +F D +LS +AGG+G+ L A
Sbjct: 491 ILEDYCLWKEYKYCRLDGQTAHSDRQDSINDFNRPGSDKFIFMLSTRAGGLGINLATADV 550
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------N 613
VI + W P +QA+DRAHRIGQ V ++ + ++V++ + + KL
Sbjct: 551 VILYDSDWNPQVDLQAQDRAHRIGQTKQVRIFRFITENSVEERIVERAEMKLHLDQVVIQ 610
Query: 614 LGQVLDGHE 622
G+++D H+
Sbjct: 611 QGRLVDSHK 619
>gi|309800861|ref|ZP_07694993.1| SNF2 family N-terminal domain protein [Bifidobacterium dentium
JCVIHMP022]
gi|308222397|gb|EFO78677.1| SNF2 family N-terminal domain protein [Bifidobacterium dentium
JCVIHMP022]
Length = 1277
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 144/485 (29%), Positives = 225/485 (46%), Gaps = 34/485 (7%)
Query: 165 QIPAHIESKLLPFQRDGVRFA---LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
++P + + L P+Q +G R+ G +LADEMGLGK++Q +A+ + P LI
Sbjct: 787 EVPQALRNVLRPYQEEGFRWLSTLWDKGFGGILADEMGLGKSVQLLALVEARKGNGPTLI 846
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVV--------VLSQLGGSNRSGFTIVSSNTKRNIP 273
+ P+SL +WAA +++ E+V VL +L S + S + +
Sbjct: 847 VCPASLVYNWAAECEKFTADLTVEVVAGTKTERRNVLRRLRAMVESESSSSSVSEASSES 906
Query: 274 LDGL-FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
DG I SYD++ + F ++ DE+ ++KN A + A + + A +
Sbjct: 907 EDGPDILITSYDLLRRDIAEYAGCRFACMVLDEAQYIKN-HATKVAKVVKQVNVA-HRFA 964
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
L+GTP +R EL+ + L P + + RY + I + + ++A
Sbjct: 965 LTGTPIENRLSELWSIFDFLMPGLLGTYTRFRERYEQP----ILAPGPEQSVMADKLRAL 1020
Query: 393 VMI---RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEV 449
V + RRLKKDVL LP K V + +A + R++YA E + K ++
Sbjct: 1021 VGLFIKRRLKKDVLTDLPDKFENVVTVKLA-GEQRKLYAA-HEQRLRAALTKTRDADFNT 1078
Query: 450 QSLK-FTEKNLINKIYTD---------SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
++ E L+ ++ D + AK+ A+ D + ++ G K LIF+ L
Sbjct: 1079 SRIRILAEFTLLRELCCDPRLVYADAKNGSAKLEAIDDLVVNCMDEGKKVLIFSQFTSFL 1138
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
D I + V I G TP R LV EF DDV ++S+KAG GL L AS
Sbjct: 1139 DLIGVRLAEHGVAFHAITGETPKRKRVELVDEFN-GDDVPVFLISLKAGNTGLNLVGASV 1197
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
VI A+ W QA DRAHRIGQ VNVY ++A DT+++ + + R K Q D
Sbjct: 1198 VIHADPWWNEAAQNQATDRAHRIGQTQDVNVYRIVAKDTIEERMLKLQRDKSRLARQFTD 1257
Query: 620 GHENS 624
G +S
Sbjct: 1258 GGASS 1262
>gi|212527854|ref|XP_002144084.1| TBP associated factor (Mot1), putative [Talaromyces marneffei ATCC
18224]
gi|210073482|gb|EEA27569.1| TBP associated factor (Mot1), putative [Talaromyces marneffei ATCC
18224]
Length = 1894
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 239/549 (43%), Gaps = 116/549 (21%)
Query: 165 QIPAHIESKLLPFQRDGV-------RFALQHGGRILLADEMGLGKTIQAIAVATCFRDV- 216
+IP I+++L +Q+DGV R+ L HG +L D+MGLGKT+Q + + +
Sbjct: 1295 EIPVAIKAELRSYQQDGVNWLAFLNRYHL-HG---ILCDDMGLGKTLQTLCIVASDHHMR 1350
Query: 217 --------------WPVLILTPSSLRLHWAAMIQQW---LNI-----PPSEIVVVLSQLG 254
P LI+ P +L HW I+Q+ LN PPS+ SQL
Sbjct: 1351 AEEYARTQKPEVRKLPSLIVCPPTLSGHWQQEIKQYAPFLNCVAYVGPPSQ----RSQLR 1406
Query: 255 GSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQA 314
G +++S YD+ I ++ + DE H +KN +A
Sbjct: 1407 GELEKADIVITS----------------YDICRNDTQIFTPISWNYCVLDEGHLIKNPKA 1450
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
K T A ++ + + L+LSGTP + +EL+ + L P + +R+ K
Sbjct: 1451 KITLAVKQLV--SNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAAS 1508
Query: 375 IYQGASNHEE------LHNLMKATV--MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI 426
+ +S+ E+ + L K + ++RRLK++VL LP K Q + D ++ R++
Sbjct: 1509 RFSKSSSKEQEAGALAIEALHKQVLPFLLRRLKEEVLNDLPPKIIQNYYCDPSDL-QRKL 1567
Query: 427 YALF-----RELEVVKGKIKACKSEEEVQSLKFTEKNLIN----------KIYTD----- 466
+ F ++L+ G + E Q+L++ + L N K Y D
Sbjct: 1568 FEDFSKKEQKDLQSKMGSTEKSAKEHIFQALQYM-RRLCNSPALVIKEGHKQYDDVQKYL 1626
Query: 467 ----------SAEAKIPAVLDYL-----------ETVIEAGCKF------LIFAHHQPML 499
S K+ A+ D L E ++ G + L+F + ML
Sbjct: 1627 SAKNSHIRDISHAPKLTALRDLLIDCGIGVDPNTEGELDTGASYVSPHRALVFCQMKEML 1686
Query: 500 DAIHQLFLKK---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTA 556
D + + LKK V +R+DG RQ +V +F +L+ GG+GL LT
Sbjct: 1687 DIVQEDVLKKMLPSVQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLTG 1746
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A TVIF E W P IQA DRAHRIGQ VNVY L+ T+++ + + R K++
Sbjct: 1747 ADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFKIDVAST 1806
Query: 617 VLDGHENSL 625
V++ L
Sbjct: 1807 VVNQQNAGL 1815
>gi|306822587|ref|ZP_07455965.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
gi|304554132|gb|EFM42041.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
Length = 1286
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 144/485 (29%), Positives = 225/485 (46%), Gaps = 34/485 (7%)
Query: 165 QIPAHIESKLLPFQRDGVRFA---LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
++P + + L P+Q +G R+ G +LADEMGLGK++Q +A+ + P LI
Sbjct: 796 EVPQALRNVLRPYQEEGFRWLSTLWDKGFGGILADEMGLGKSVQLLALVEARKGNGPTLI 855
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVV--------VLSQLGGSNRSGFTIVSSNTKRNIP 273
+ P+SL +WAA +++ E+V VL +L S + S + +
Sbjct: 856 VCPASLVYNWAAECEKFTADLTVEVVAGTKTERRNVLRRLRAMVESESSSSSVSEASSES 915
Query: 274 LDGL-FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
DG I SYD++ + F ++ DE+ ++KN A + A + + A +
Sbjct: 916 EDGPDILITSYDLLRRDIAEYAGCRFACMVLDEAQYIKN-HATKVAKVVKQVNVA-HRFA 973
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
L+GTP +R EL+ + L P + + RY + I + + ++A
Sbjct: 974 LTGTPIENRLSELWSIFDFLMPGLLGTYTRFRERYEQP----ILAPGPEQSVMADKLRAL 1029
Query: 393 VMI---RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEV 449
V + RRLKKDVL LP K V + +A + R++YA E + K ++
Sbjct: 1030 VGLFIKRRLKKDVLTDLPDKFENVVTVKLA-GEQRKLYAA-HEQRLRAALTKTRDADFNT 1087
Query: 450 QSLK-FTEKNLINKIYTD---------SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
++ E L+ ++ D + AK+ A+ D + ++ G K LIF+ L
Sbjct: 1088 SRIRILAEFTLLRELCCDPRLVYADAKNGSAKLEAIDDLVVNCMDEGKKVLIFSQFTSFL 1147
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
D I + V I G TP R LV EF DDV ++S+KAG GL L AS
Sbjct: 1148 DLIGVRLAEHGVAFHAITGETPKRKRVELVDEFN-GDDVPVFLISLKAGNTGLNLVGASV 1206
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
VI A+ W QA DRAHRIGQ VNVY ++A DT+++ + + R K Q D
Sbjct: 1207 VIHADPWWNEAAQNQATDRAHRIGQTQDVNVYRIVAKDTIEERMLKLQRDKSRLARQFTD 1266
Query: 620 GHENS 624
G +S
Sbjct: 1267 GGASS 1271
>gi|194883574|ref|XP_001975876.1| GG20326 [Drosophila erecta]
gi|190659063|gb|EDV56276.1| GG20326 [Drosophila erecta]
Length = 1027
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 241/499 (48%), Gaps = 55/499 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++D PA+I+S ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +
Sbjct: 115 RFDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFK 174
Query: 215 -DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P +++ P S +W ++W PS V L +G + I R++
Sbjct: 175 NQAGPHIVIVPKSTLQNWVNEFKKWC---PSLRAVCL--IGDQDTRNTFI------RDVL 223
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
+ G +++ SY++ ++ +++ N++ ++ DE+H +KN ++K + L K A L
Sbjct: 224 MPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSK-LSEILREFKTAN-RL 281
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PDV+ + ++ + G + LH ++K
Sbjct: 282 LITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLG---DDALITRLHAVLKP 338
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK +V +L K+ ++F+ ++ K R Y L ++++VV G K K +
Sbjct: 339 -FLLRRLKAEVEKRLKPKKEMKIFVGLS-KMQRDWYTKVLLKDIDVVNGAGKVEKMR--L 394
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLIFA 493
Q++ + N Y D AE P A+LD L + E G + LIF+
Sbjct: 395 QNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFS 454
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + + + R+DG TP R + EF + K +LS +AGG+G+
Sbjct: 455 QMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSTKFLFMLSTRAGGLGI 514
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA DRAHRIGQ V V+ L+ TV++ + + KL
Sbjct: 515 NLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLR 574
Query: 613 ------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 575 LDKMVIQGGRLVDNRSNQL 593
>gi|395542615|ref|XP_003773222.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Sarcophilus
harrisii]
Length = 1041
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 241/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 144 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 203
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W ++W +P V ++ R+ F
Sbjct: 204 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRW--VPTLRSVCLIGD--KEQRAAF 259
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 260 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 312
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 313 VREF--KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 370
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 371 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 425
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 426 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 483
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 484 LKEQDSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSSKFV 543
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 544 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 603
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 604 ERIVERAEMKL 614
>gi|126331506|ref|XP_001377204.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Monodelphis
domestica]
Length = 1050
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 241/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 153 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 212
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W ++W +P V ++ R+ F
Sbjct: 213 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRW--VPTLRSVCLIGD--KEQRAAF 268
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 269 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 321
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 322 VREF--KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 379
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 380 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 434
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 435 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 492
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 493 LKEQDSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSSKFV 552
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 553 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 612
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 613 ERIVERAEMKL 623
>gi|384875322|gb|AFI26247.1| imitation SWI [Drosophila melanogaster]
gi|384875323|gb|AFI26248.1| imitation SWI [Drosophila melanogaster]
gi|384875324|gb|AFI26249.1| imitation SWI [Drosophila melanogaster]
Length = 1027
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 241/499 (48%), Gaps = 55/499 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++D PA+I+S ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +
Sbjct: 115 RFDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFK 174
Query: 215 -DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P +++ P S +W ++W PS V L +G + I R++
Sbjct: 175 NQAGPHIVIVPKSTLQNWVNEFKKWC---PSLRAVCL--IGDQDTRNTFI------RDVL 223
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
+ G +++ SY++ ++ +++ N++ ++ DE+H +KN ++K + L K A L
Sbjct: 224 MPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSK-LSEILREFKTAN-RL 281
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PDV+ + ++ + G + LH ++K
Sbjct: 282 LITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLG---DDALITRLHAVLKP 338
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK +V +L K+ ++F+ ++ K R Y L ++++VV G K K +
Sbjct: 339 -FLLRRLKAEVEKRLKPKKEMKIFVGLS-KMQRDWYTKVLLKDIDVVNGAGKVEKMR--L 394
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLIFA 493
Q++ + N Y D AE P A+LD L + E G + LIF+
Sbjct: 395 QNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFS 454
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + + + R+DG TP R + EF + K +LS +AGG+G+
Sbjct: 455 QMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGI 514
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA DRAHRIGQ V V+ L+ TV++ + + KL
Sbjct: 515 NLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLR 574
Query: 613 ------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 575 LDKMVIQGGRLVDNRSNQL 593
>gi|118781335|ref|XP_311417.3| AGAP010700-PA [Anopheles gambiae str. PEST]
gi|116130122|gb|EAA07020.3| AGAP010700-PA [Anopheles gambiae str. PEST]
Length = 1026
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 237/480 (49%), Gaps = 51/480 (10%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDV- 216
++++ P +I++ ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +++
Sbjct: 116 RFEESPPYIKAGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKNIR 175
Query: 217 ---WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG-SNRSGFTIVSSNTKRNI 272
P +++ P S +W +W PS V L +G R+ F R++
Sbjct: 176 NNPGPHIVIVPKSTLQNWVNEFGRWC---PSIRAVCL--IGDQETRTAFI-------RDV 223
Query: 273 PLDGLFN--IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
+ G ++ I SY++ ++ + + N++ ++ DE+H +KN ++K + L K A
Sbjct: 224 LMPGEWDVCITSYEMCIREKAVFKKFNWRYMVIDEAHRIKNEKSK-LSEILREFKTAN-R 281
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
LLL+GTP + EL+ L L PD++ + ++ + + G S E LH ++K
Sbjct: 282 LLLTGTPLQNNLHELWALLNFLLPDIFNSADDFDSWFDANQCMG---DNSLIERLHAVLK 338
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
++RRLK +V +L K+ ++F+ ++ K R+ Y L ++++VV G K K
Sbjct: 339 P-FLLRRLKSEVEKRLLPKKEVKIFVGLS-KMQREWYTKILMKDIDVVNGAGKVEKMR-- 394
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LETVIEAGCKFLIF 492
+Q++ + N Y D AE P DY L + E + LIF
Sbjct: 395 LQNILMQLRKCTNHPYLFDGAEPGPPYTTDYHLLENAGKMVVLDKLLRKLQEQDSRVLIF 454
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVG 551
+ MLD + + R+DG TP R ++ ++ ++ K +LS +AGG+G
Sbjct: 455 SQMTRMLDILEDFCHWRGYQYCRLDGQTPHEDRSNMIADYNAENSTKFIFMLSTRAGGLG 514
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ L A VI + W P +QA DRAHRIGQ V V+ L+ +TV++ + + KL
Sbjct: 515 INLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVERAEVKL 574
>gi|17737463|ref|NP_523719.1| imitation SWI, isoform A [Drosophila melanogaster]
gi|24653132|ref|NP_725203.1| imitation SWI, isoform B [Drosophila melanogaster]
gi|24653134|ref|NP_725204.1| imitation SWI, isoform C [Drosophila melanogaster]
gi|6647560|sp|Q24368.1|ISWI_DROME RecName: Full=Chromatin-remodeling complex ATPase chain Iswi;
AltName: Full=CHRAC 140 kDa subunit; AltName:
Full=Nucleosome-remodeling factor 140 kDa subunit;
Short=NURF-140; AltName: Full=Protein imitation swi
gi|439197|gb|AAA19868.1| ISWI protein [Drosophila melanogaster]
gi|7303422|gb|AAF58479.1| imitation SWI, isoform A [Drosophila melanogaster]
gi|21627326|gb|AAM68637.1| imitation SWI, isoform B [Drosophila melanogaster]
gi|21627327|gb|AAM68638.1| imitation SWI, isoform C [Drosophila melanogaster]
gi|206597326|gb|ACI15757.1| FI04427p [Drosophila melanogaster]
Length = 1027
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 241/499 (48%), Gaps = 55/499 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++D PA+I+S ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +
Sbjct: 115 RFDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFK 174
Query: 215 -DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P +++ P S +W ++W PS V L +G + I R++
Sbjct: 175 NQAGPHIVIVPKSTLQNWVNEFKKWC---PSLRAVCL--IGDQDTRNTFI------RDVL 223
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
+ G +++ SY++ ++ +++ N++ ++ DE+H +KN ++K + L K A L
Sbjct: 224 MPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSK-LSEILREFKTAN-RL 281
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PDV+ + ++ + G + LH ++K
Sbjct: 282 LITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLG---DDALITRLHAVLKP 338
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK +V +L K+ ++F+ ++ K R Y L ++++VV G K K +
Sbjct: 339 -FLLRRLKAEVEKRLKPKKEMKIFVGLS-KMQRDWYTKVLLKDIDVVNGAGKVEKMR--L 394
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLIFA 493
Q++ + N Y D AE P A+LD L + E G + LIF+
Sbjct: 395 QNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFS 454
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + + + R+DG TP R + EF + K +LS +AGG+G+
Sbjct: 455 QMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGI 514
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA DRAHRIGQ V V+ L+ TV++ + + KL
Sbjct: 515 NLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLR 574
Query: 613 ------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 575 LDKMVIQGGRLVDNRSNQL 593
>gi|424827078|ref|ZP_18251900.1| helicase, Snf2 family protein [Clostridium sporogenes PA 3679]
gi|365980387|gb|EHN16420.1| helicase, Snf2 family protein [Clostridium sporogenes PA 3679]
Length = 1098
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 243/507 (47%), Gaps = 62/507 (12%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAIAVATCF 213
+ +Y ++P ++ + L +Q G ++ L+ GG +LADEMGLGKTIQ I+
Sbjct: 632 MNNEYYEVPKNLNATLREYQIAGYKWMKTLSNLRFGG--VLADEMGLGKTIQTISFLLSE 689
Query: 214 RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
+ LI+TP+SL +W Q++ N I VV L +R
Sbjct: 690 KGC-KSLIVTPTSLIYNWQDEFQRFAN--DLRIGVVHGSLD--------------QRMKV 732
Query: 274 LDGLFNIISYDVVLKLQNILMSSN-------FKIVIADESHFLKNAQAKRTAATLPIIKK 326
LD NI YDV+L L + F I DE +KN A+ T + I K
Sbjct: 733 LD---NIEEYDVLLTTYGTLRNDVKLYKEIIFDYCIIDEGQNIKNPLAQSTDSVKKINSK 789
Query: 327 AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELH 386
++AL +GTP + +EL+ + + P N + ++ I G N ++L
Sbjct: 790 VRFAL--TGTPIENNLMELWSIFDFIMPGYLYNEERFQEKF-------INAGEENIDKLK 840
Query: 387 NLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSE 446
++ ++ RR KKDVL LP K ++ +++ R IY + ++ +K K+K K E
Sbjct: 841 TFIRPFIL-RREKKDVLKDLPDKIEKKFLVEMTSNQGR-IYKAY--MKSIKEKLKNSK-E 895
Query: 447 EEVQSLKFTEK--------NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPM 498
+ + + K +LI Y K+ ++ L+ ++ G K L+F+ +
Sbjct: 896 DRITIFSYLTKLRQLCLDPSLIIDEYK-GGSGKLKIAMELLQEGVDEGKKILLFSQFTSV 954
Query: 499 LDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAS 558
L I +L K+ + + +DG T + R LV +F + +K ++S+KAGG GL LT+A+
Sbjct: 955 LKNISKLLDKEGIEYLYLDGSTNASDRIKLVNKFNDSSHIKVFLISLKAGGTGLNLTSAN 1014
Query: 559 TVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
VI + W P QA DRAHRIGQ + V+V L+ +T+++ + + K E + V+
Sbjct: 1015 LVIHFDPWWNPAIEDQATDRAHRIGQKNLVDVIKLVCKETIEEKIITLQEDKKELINNVM 1074
Query: 619 DGHENSLEVSSSQIRSSPAKQKTLDSF 645
+ ++ + + ++ +K++ LD F
Sbjct: 1075 NS-----DLKNGHLINTLSKEEILDLF 1096
>gi|20151803|gb|AAM11261.1| RH13158p [Drosophila melanogaster]
Length = 1027
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 241/499 (48%), Gaps = 55/499 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++D PA+I+S ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +
Sbjct: 115 RFDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFK 174
Query: 215 -DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P +++ P S +W ++W PS V L +G + I R++
Sbjct: 175 NQAGPHIVIVPKSTLQNWVNEFKKWC---PSLRAVCL--IGDQDTRNTFI------RDVL 223
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
+ G +++ SY++ ++ +++ N++ ++ DE+H +KN ++K + L K A L
Sbjct: 224 MPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSK-LSEILREFKTAN-RL 281
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PDV+ + ++ + G + LH ++K
Sbjct: 282 LITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLG---DDALITRLHAVLKP 338
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK +V +L K+ ++F+ ++ K R Y L ++++VV G K K +
Sbjct: 339 -FLLRRLKAEVEKRLKPKKEMKIFVGLS-KMQRDWYTKVLLKDIDVVNGAGKVEKMR--L 394
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLIFA 493
Q++ + N Y D AE P A+LD L + E G + LIF+
Sbjct: 395 QNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFS 454
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + + + R+DG TP R + EF + K +LS +AGG+G+
Sbjct: 455 QMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGI 514
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA DRAHRIGQ V V+ L+ TV++ + + KL
Sbjct: 515 NLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLR 574
Query: 613 ------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 575 LDKMVIQGGRLVDNRSNQL 593
>gi|195333840|ref|XP_002033594.1| GM21414 [Drosophila sechellia]
gi|194125564|gb|EDW47607.1| GM21414 [Drosophila sechellia]
Length = 1027
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 241/499 (48%), Gaps = 55/499 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++D PA+I+S ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +
Sbjct: 115 RFDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFK 174
Query: 215 -DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P +++ P S +W ++W PS V L +G + I R++
Sbjct: 175 NQAGPHIVIVPKSTLQNWVNEFKKWC---PSLRAVCL--IGDQDTRNTFI------RDVL 223
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
+ G +++ SY++ ++ +++ N++ ++ DE+H +KN ++K + L K A L
Sbjct: 224 MPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSK-LSEILREFKTAN-RL 281
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PDV+ + ++ + G + LH ++K
Sbjct: 282 LITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLG---DDALITRLHAVLKP 338
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK +V +L K+ ++F+ ++ K R Y L ++++VV G K K +
Sbjct: 339 -FLLRRLKAEVEKRLKPKKEMKIFVGLS-KMQRDWYTKVLLKDIDVVNGAGKVEKMR--L 394
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLIFA 493
Q++ + N Y D AE P A+LD L + E G + LIF+
Sbjct: 395 QNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFS 454
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + + + R+DG TP R + EF + K +LS +AGG+G+
Sbjct: 455 QMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGI 514
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA DRAHRIGQ V V+ L+ TV++ + + KL
Sbjct: 515 NLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLR 574
Query: 613 ------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 575 LDKMVIQGGRLVDNRSNQL 593
>gi|345306756|ref|XP_001509678.2| PREDICTED: probable global transcription activator SNF2L1-like
[Ornithorhynchus anatinus]
Length = 1011
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 244/500 (48%), Gaps = 57/500 (11%)
Query: 162 KYDQIPAHIESKLL-PFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATC---FR 214
+++ P++++ L +Q G+ + + ++G +LADEMGLGKT+Q IA+ +R
Sbjct: 123 RFEVSPSYVKGGTLRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYR 182
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-RSGFTIVSSNTKRNI 272
++ P ++L P S +W ++W+ PS V L +G + R+ F R++
Sbjct: 183 NIPGPHMVLVPKSTLHNWMNEFKRWV---PSLRAVCL--IGDKDARAAFI-------RDV 230
Query: 273 PLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
+ G +++ SY++V+K +++ N++ ++ DE+H +KN ++K + K
Sbjct: 231 MMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF--KTTNR 288
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
LLL+GTP + EL+ L L PDV+ + ++ + + G + E LH ++K
Sbjct: 289 LLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV---ERLHAVLK 345
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
++RR+K +V LP K+ +++L ++ K R+ Y L ++++++ K K
Sbjct: 346 P-FLLRRIKAEVEKSLPPKKEVKIYLGLS-KMQREWYTRILMKDIDILNSAGKMDKMR-- 401
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIF 492
+ ++ + N Y D AE P D L + E G + LIF
Sbjct: 402 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLVNNSGKMVALDKLLSKLKEQGSRVLIF 461
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVG 551
+ +LD + + + R+DG TP R+ + F + K +LS +AGG+G
Sbjct: 462 SQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLG 521
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ L A VI + W P +QA DRAHRIGQ V V+ L+ ++TV+D + + KL
Sbjct: 522 INLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEDRIVERAEIKL 581
Query: 612 E------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 582 RLDSIVIQQGRLIDQQSNKL 601
>gi|325956842|ref|YP_004292254.1| Non-specific serine/threonine protein kinase [Lactobacillus
acidophilus 30SC]
gi|325333407|gb|ADZ07315.1| Non-specific serine/threonine protein kinase [Lactobacillus
acidophilus 30SC]
Length = 1179
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 234/478 (48%), Gaps = 52/478 (10%)
Query: 160 REKYDQIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATC-- 212
R + D IP +++ L P+Q+ G + GG LLADEMGLGKT+Q IAV
Sbjct: 703 RIRRDAIPQTLQNTLRPYQKAGFNWLSTIINYNFGG--LLADEMGLGKTLQVIAVLLARK 760
Query: 213 --FRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKR 270
+ P L++ P+S+ +W A I+++ P V VL GGSN ++ K
Sbjct: 761 QQHKSNLPSLVIAPASVIYNWQAEIKKF---APELSVGVL---GGSNDERRNMLVHQNKY 814
Query: 271 NIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
++ I SY + + +F + I DE+ +KN Q+ TA ++ +IK AQ+
Sbjct: 815 DVL------ITSYQSLNHDLEAYHNLSFNLQILDEAQNIKNHQSI-TAQSVKVIK-AQHR 866
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
L L+GTP ++ EL+ + L P + ++ + F + ++L + +
Sbjct: 867 LALTGTPIENKLSELWSIFDYLMPGFLGSYVDFKKK------FEVPIVKKEDKDLESALS 920
Query: 391 ATV---MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE 447
TV ++RRLKKDVL LP K + + + + +K +Y L ++ + ++ + ++
Sbjct: 921 ETVAPFILRRLKKDVLKDLPAKDEEVIPIKMNQKQA-GLYHL--QMNKIIAQLNG-QDDD 976
Query: 448 EVQSLKF-------------TEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAH 494
+ + +F + +L+ Y ++ K+ A +D +++ +E G K L+F+
Sbjct: 977 DFKKFRFQILAQITKLREICCDPHLLYDNYHGKSD-KLKATIDLIKSNLENGHKILLFSQ 1035
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
MLD + + K KV + G TP RQ + F ++S+KAGG G+ L
Sbjct: 1036 FTSMLDILQEKLAKLKVPTFMLTGSTPKEKRQEDIQHFNSLKQPGVFLISLKAGGTGINL 1095
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
T+A VI + W QA DRAHRIGQ +SV +Y ++ DTV++ + + + K E
Sbjct: 1096 TSADVVIHYDPWWNIAAENQATDRAHRIGQKNSVKIYKMVTQDTVEERIIKLQQKKAE 1153
>gi|195485258|ref|XP_002091017.1| GE12485 [Drosophila yakuba]
gi|194177118|gb|EDW90729.1| GE12485 [Drosophila yakuba]
Length = 1027
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 241/499 (48%), Gaps = 55/499 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++D PA+I+S ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +
Sbjct: 115 RFDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFK 174
Query: 215 -DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P +++ P S +W ++W PS V L +G + I R++
Sbjct: 175 NQAGPHIVIVPKSTLQNWVNEFKKWC---PSLRAVCL--IGDQDTRNTFI------RDVL 223
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
+ G +++ SY++ ++ +++ N++ ++ DE+H +KN ++K + L K A L
Sbjct: 224 MPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSK-LSEILREFKTAN-RL 281
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PDV+ + ++ + G + LH ++K
Sbjct: 282 LITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLG---DDALITRLHAVLKP 338
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK +V +L K+ ++F+ ++ K R Y L ++++VV G K K +
Sbjct: 339 -FLLRRLKAEVEKRLKPKKEMKIFVGLS-KMQRDWYTKVLLKDIDVVNGAGKVEKMR--L 394
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLIFA 493
Q++ + N Y D AE P A+LD L + E G + LIF+
Sbjct: 395 QNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFS 454
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + + + R+DG TP R + EF + K +LS +AGG+G+
Sbjct: 455 QMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGI 514
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA DRAHRIGQ V V+ L+ TV++ + + KL
Sbjct: 515 NLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLR 574
Query: 613 ------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 575 LDKMVIQGGRLVDNRSNQL 593
>gi|225681546|gb|EEH19830.1| modifier of transcription [Paracoccidioides brasiliensis Pb03]
Length = 1912
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 146/543 (26%), Positives = 239/543 (44%), Gaps = 104/543 (19%)
Query: 165 QIPAHIESKLLPFQRDGV-------RFALQHGGRILLADEMGLGKTIQAIAVATCFRDV- 216
+IP I+++L +Q++GV R+ L HG +L D+MGLGKT+Q + + +
Sbjct: 1312 EIPVAIKAELRSYQQEGVNWLAFLNRYHL-HG---ILCDDMGLGKTLQTLCIVASDHHMR 1367
Query: 217 --------------WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFT 262
P LI+ P +L HW I+Q+ + + L+ +G
Sbjct: 1368 AEEFARTGAPEAKRLPSLIICPPTLSGHWQQEIKQY-----APFLSCLAYVGPP------ 1416
Query: 263 IVSSNTKRNIPLDGL-FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATL 321
+ + + LD + I SYD+ + N+ + DE H +KN +AK T A
Sbjct: 1417 --AERARLRVSLDSVDIVITSYDICRNDNDTFRPLNWNYCVLDEGHLIKNPKAKITRAVK 1474
Query: 322 PIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASN 381
+ K+ + L+LSGTP + +EL+ + L P + +R+ K + +S+
Sbjct: 1475 CL--KSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASRFSKSSS 1532
Query: 382 HEE------LHNLMKATV--MIRRLKKDVLAQLPVKRRQQVFLDVAE------------- 420
E+ + L K + ++RRLK++VL LP K Q + D+++
Sbjct: 1533 KEQEAGALAIEALHKQVLPFLLRRLKEEVLNDLPPKILQNYYCDLSDLQRKLFEDFTKKE 1592
Query: 421 -KDMRQIYA---------LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT----- 465
KD+ +I +F+ L+ ++ + C S V N I K+
Sbjct: 1593 QKDIAKIVGSTDKEAKQHIFQALQYMR---RLCNSPALVVKENHKRYNEIQKLLEAKNSH 1649
Query: 466 --DSAEA-KIPAVLDYL-----------ETVIEAGCKF------LIFAHHQPMLDAIHQL 505
D A A K+ A+ D L E ++ G + L+F + MLD +
Sbjct: 1650 IRDVAHAPKLSALRDLLVDCGIGVDPSTEGELDTGANYVSPHRALVFCQMKEMLDIVQND 1709
Query: 506 FLKK---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIF 562
K+ V +R+DG A RQ +V +F +L+ GG+GL LT A TVIF
Sbjct: 1710 VFKRLLPSVQYLRLDGSVEAAKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLTGADTVIF 1769
Query: 563 AELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
E W P IQA DRAHRIGQ VNVY L+ T+++ + ++ R K++ V++
Sbjct: 1770 VEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVNQQN 1829
Query: 623 NSL 625
L
Sbjct: 1830 AGL 1832
>gi|345324924|ref|XP_001513276.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5
[Ornithorhynchus anatinus]
Length = 1051
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 241/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 154 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 213
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W ++W +P V ++ R+ F
Sbjct: 214 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRW--VPTLRSVCLIGD--KEQRAAF 269
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 270 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 322
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 323 VREF--KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 380
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 381 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 435
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 436 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 493
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 494 LKEQDSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSSKFV 553
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 554 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 613
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 614 ERIVERAEMKL 624
>gi|157103787|ref|XP_001648130.1| helicase [Aedes aegypti]
gi|108880485|gb|EAT44710.1| AAEL003968-PA [Aedes aegypti]
Length = 1027
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 247/500 (49%), Gaps = 57/500 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDV- 216
+++ P +I++ ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ ++
Sbjct: 128 RFEASPPYIKTGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKNFR 187
Query: 217 ---WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG-SNRSGFTIVSSNTKRNI 272
P +++ P S +W +W PS V L +G R+ F R++
Sbjct: 188 NNPGPHIVIVPKSTLQNWVNEFGRWC---PSLRAVCL--IGDQETRNAFI-------RDV 235
Query: 273 PLDGLFN--IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
+ G ++ I SY++ ++ + + N++ ++ DE+H +KN ++K + L K A
Sbjct: 236 LMPGEWDVCITSYEMCIREKAVFKKFNWRYMVIDEAHRIKNEKSK-LSEILREFKTAN-R 293
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
LLL+GTP + EL+ L L PD++ + ++ + + G + E LH ++K
Sbjct: 294 LLLTGTPLQNNLHELWALLNFLLPDIFNSADDFDSWFDANECIGDNKLI---ERLHAVLK 350
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
++RRLK +V +L K+ ++F+ ++ K R+ Y L +++++V G K K
Sbjct: 351 P-FLLRRLKSEVEKRLLPKKEVKIFVGLS-KMQREWYTKILMKDIDIVNGAGKMEKMR-- 406
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LETVIEAGCKFLIF 492
+Q++ + N Y D AE P DY L + E G + L+F
Sbjct: 407 LQNILMQLRKCTNHPYLFDGAEPGPPYTTDYHLLENSGKMVVLDKLLTKLQEQGSRVLVF 466
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVG 551
+ MLD + + R+DG TP R ++ E+ ++ K +LS +AGG+G
Sbjct: 467 SQMTRMLDILEDYCYWRGYQYCRLDGQTPHEDRTKMIDEYNAENSSKFIFMLSTRAGGLG 526
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDV--VRS 609
+ L A VI + W P +QA DRAHRIGQ V V+ L+ +TV++ + + ++
Sbjct: 527 INLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVERAEIKL 586
Query: 610 KLENL----GQVLDGHENSL 625
KL+ L G+++D N L
Sbjct: 587 KLDKLVIQQGRLVDNKTNQL 606
>gi|388853645|emb|CCF52817.1| probable ISW2-ATPase component of a two subunit chromatin
remodeling complex [Ustilago hordei]
Length = 1113
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 231/481 (48%), Gaps = 53/481 (11%)
Query: 163 YDQIPAHIESKLL-PFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDVWP 218
+++ P++++ + +Q G+ + +L H G +LADEMGLGKT+Q I+ RD+
Sbjct: 216 FNESPSYVKGGTMRDYQIQGLNWMISLYHNGINGILADEMGLGKTLQTISFLGYLRDLRD 275
Query: 219 V----LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
L++ P S +W Q+W+ P VV L G G I +N L
Sbjct: 276 TPGFHLVVVPKSTLDNWYREFQRWV---PGFNVVTLK--GAKEERGQVI------QNHLL 324
Query: 275 DGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
G F+++ +Y++ L+ ++ L +++ ++ DE+H +KN + + +++ LL
Sbjct: 325 SGDFDVLITTYEMCLREKSALKKLSWEYIVIDEAHRIKNVDSILSQIVRAFNSRSR--LL 382
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE----LHNL 388
++GTP + +EL+ L L PDV+ N ++ + KG +G N ++ LH +
Sbjct: 383 ITGTPLQNNLMELWSLLNFLLPDVFSNSEDF-ETWFKG------KGDENQDQVVQQLHKV 435
Query: 389 MKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF-RELEVVKGKIKACKSEE 447
++ ++RR+K DV L K+ +F+ + + R ++ ++++ V G + + +
Sbjct: 436 LRP-FLLRRVKADVEKSLLPKKEINIFVGLTDMQRRWYKSILEKDIDAVNGGVGRKQGKT 494
Query: 448 EVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLI 491
+ ++ + N Y D AE P D L + E G + LI
Sbjct: 495 RLLNIVMQLRKCCNHPYLFDGAEPGPPFTTDEHLVDNSGKMVILDRLLRKMKEKGSRVLI 554
Query: 492 FAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGV 550
F+ MLD + L ++ RIDGGT R A + ++ + D K +L+ +AGG+
Sbjct: 555 FSQMSRMLDILEDYCLFREYQYCRIDGGTAHEDRIAAIDDYNQPDSEKFIFLLTTRAGGL 614
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
G+ LT A V+ + W P +QA DRAHRIGQ V V+ + +++ + D K
Sbjct: 615 GINLTTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVYVFRFVTEHAIEERILDRAAQK 674
Query: 611 L 611
L
Sbjct: 675 L 675
>gi|340380649|ref|XP_003388834.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 homolog
[Amphimedon queenslandica]
Length = 1451
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 145/503 (28%), Positives = 229/503 (45%), Gaps = 66/503 (13%)
Query: 158 DLREKYDQIPAHIE---SKLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIAVAT 211
D ++KY P +I L P+Q +G+ RF+ +LADEMGLGKTIQ I+
Sbjct: 198 DPKKKYTVQPDYISQTGGTLHPYQLEGINWIRFSWAQNTNTILADEMGLGKTIQTISFLY 257
Query: 212 CF----RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRS-----GFT 262
P LI P S ++W + W ++ VV NR+ F+
Sbjct: 258 SLVKEGHTNGPFLISAPLSTIINWEREFEFW----APDLYVVTYHGSKDNRAIIREHEFS 313
Query: 263 IVSS----------NTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLK 310
VS K+++P+ FN++ SY+ V +L S N+ +++ DE+H LK
Sbjct: 314 FVSGAVKGTSKQLQRVKKDLPIK--FNVLLTSYEYVSVDATVLQSINWAVLVVDEAHRLK 371
Query: 311 NAQAK--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
N Q+K R + K +Y LLL+GTP + ELF L L D + ++ E+
Sbjct: 372 NNQSKFFRVLSQY----KIKYKLLLTGTPLQNNLEELFHLLNFLSRDNFNSLEEFQEE-- 425
Query: 369 KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA---EKDMRQ 425
F +LH+++ A ++RRLK DVL +P K V +D+A +K R
Sbjct: 426 ----FADISKEDQVSKLHDML-APHLLRRLKADVLKNIPSKTELIVRVDLAPMQKKFYRW 480
Query: 426 IYAL-FRELEVVKGK----------IKACKSEEEVQSLKFTEKNLINKIYTD-----SAE 469
I F +L K +K C + + E L Y + ++
Sbjct: 481 ILTKNFEKLNTKGAKPVSLINIMMDLKKCSNHPYLFPTAAEEAPLTAGGYYEGTALIASS 540
Query: 470 AKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALV 529
K+ + L+ + E+G + LIF+ MLD + RIDGG + RQ +
Sbjct: 541 GKLIVLEKMLKKLKESGHRVLIFSQMTKMLDILEDFLEHLSYKYERIDGGVTGSERQQCI 600
Query: 530 TEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSV 588
F + +LS +AGG+G+ L +A TVI + W P + +QA RAHRIGQ + V
Sbjct: 601 DRFNAPGAEQFVFLLSTRAGGLGINLASADTVIIFDSDWNPHNDVQAFSRAHRIGQANKV 660
Query: 589 NVYYLLANDTVDDIVWDVVRSKL 611
+Y + ++V++ V +V + K+
Sbjct: 661 MIYRFVTRNSVEERVCEVAKRKM 683
>gi|301062743|ref|ZP_07203355.1| SNF2 family N-terminal domain protein [delta proteobacterium
NaphS2]
gi|300443150|gb|EFK07303.1| SNF2 family N-terminal domain protein [delta proteobacterium
NaphS2]
Length = 896
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 241/489 (49%), Gaps = 50/489 (10%)
Query: 165 QIP-AHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWP---VL 220
Q+P +++ L P+Q DGV+FAL L+ DEMGLGKT+QAIA+A ++++ VL
Sbjct: 301 QVPTCELKTSLYPYQDDGVKFALFKKA-ALIGDEMGLGKTLQAIALAVMKKEIFGFERVL 359
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDG--LF 278
++T +SL+ W I+++ N E VV++ ++ +R I DG F
Sbjct: 360 VVTLASLKDQWKREIERFSN----ETSVVVAG------------PADKRRGIYRDGQYFF 403
Query: 279 NIISYDVVLKLQNILMSSNFK--IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
I +Y+ VL+ ++ + S+FK +VI DE+ +KN K A + +K +AL+L+GT
Sbjct: 404 AITNYEAVLR--DVTVISDFKPDLVILDEAQRIKNFSTKTAEAVKRLPRK--HALVLTGT 459
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYG------NRYCKGGVFGIYQGASNHEELHNLMK 390
P ++ +++ ++ L P + + ++ +R KG + G + HE L+ L+
Sbjct: 460 PLENKLEDVYSIVQFLDPHLLSPLWQFAADHFMISRKKKGYILGYHNLERLHERLNPLV- 518
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL--EVVKGKIKACKSEEE 448
IRR K++VL LP + ++D+ + R+IY+ + + ++ K
Sbjct: 519 ----IRRKKEEVLKDLPDEVVNNYYVDL-HYEQREIYSGYVRVLHPLLNKKFLTPMDIRR 573
Query: 449 VQSLKFTEKNLINKIYTDSAEAKIPAVLDYL-----ETVIEAGCKFLIFAHHQPMLDAIH 503
+Q L + + + Y + + L L E VIE+ K +IF+ M I
Sbjct: 574 IQELLVRMRMVCDSTYLIDRKTHVSPKLTELASVIDELVIESKRKMVIFSEWTTMTFLIA 633
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
+ + + + + G P RQ+L+ EF D + LS AGG GL L AA V+
Sbjct: 634 RHLSEVGIPFVELSGKIPVKKRQSLIDEFTNNPDCRV-FLSTDAGGTGLNLQAADCVVNF 692
Query: 564 ELSWTPGDLIQAEDRAHRIGQVS-SVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
EL W P L Q R RIGQ S +NV + TV++ ++ ++ K E V +G E
Sbjct: 693 ELPWNPAKLNQRIGRVSRIGQKSQCINVVNFICKGTVEEKIFAGIQLKTELFKGVFEGGE 752
Query: 623 NSLEVSSSQ 631
+ +E + +
Sbjct: 753 DIVEFTQEK 761
>gi|268573820|ref|XP_002641887.1| C. briggsae CBR-ISW-1 protein [Caenorhabditis briggsae]
Length = 1012
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 240/498 (48%), Gaps = 54/498 (10%)
Query: 147 QRAIASASAAPDLREKYDQIPAHIES-KLLPFQRDGVRF--ALQHGG-RILLADEM---- 198
+ +A A A +L +D+ P +IE+ ++ +Q G+ + +LQH +LADEM
Sbjct: 105 EEMVADADKADELV-VFDKSPFYIENGEMRDYQVRGLNWLASLQHNNINGILADEMVFFK 163
Query: 199 GLGKTIQAIAVATCFR----DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLG 254
GLGKT+Q I++ + P L++ P S +W +W + I++
Sbjct: 164 GLGKTLQTISLLGYMKHYKNQASPHLVIVPKSTLQNWLNEFNKWCPSINAHILI------ 217
Query: 255 GSNRSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNA 312
G + T R++ L F+++ +Y+++LK++ L N+K +I DE+H +KN
Sbjct: 218 -----GDEAARNVTLRDVVLPQKFDVLCTTYEMMLKVKTQLRKLNWKYIIIDEAHRIKNE 272
Query: 313 QAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV 372
++K + + +Q LL++GTP + EL+ L L PD++ + ++ + + +
Sbjct: 273 KSKLSETVREL--NSQNRLLITGTPLQNNLHELWALLNFLLPDIFTSSEDFDSWFSSEAM 330
Query: 373 FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LF 430
G + LH +++ ++RR+K DV L K+ +V++ ++ K R+ Y L
Sbjct: 331 SGNIDLV---QRLHKVLQP-FLLRRIKSDVEKSLLPKKEVKVYVGLS-KMQREWYTKILL 385
Query: 431 RELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD------------ 477
++++V+ G K K+ + ++ + +N Y D AE P D
Sbjct: 386 KDIDVINGAGKVEKAR--LMNILMHLRKCVNHPYLFDGAEPGPPYTTDQHLVDNCGKMVV 443
Query: 478 ---YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE 534
L + E G + LIF+ MLD + +K R+DG T R + + +
Sbjct: 444 LDKLLSRLQEQGSRVLIFSQFSRMLDLLEDYCWWRKYEYCRLDGSTAHVDRTSAIEAYNA 503
Query: 535 KDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYL 593
D K +L+ +AGG+G+ L A VI + W P +QA DRAHRIGQ V V+ L
Sbjct: 504 PDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVKVFRL 563
Query: 594 LANDTVDDIVWDVVRSKL 611
+ +TVDD + + +KL
Sbjct: 564 ITENTVDDRIIEKAEAKL 581
>gi|168206269|ref|ZP_02632274.1| putative helicase [Clostridium perfringens E str. JGS1987]
gi|170662244|gb|EDT14927.1| putative helicase [Clostridium perfringens E str. JGS1987]
Length = 1067
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 146/530 (27%), Positives = 251/530 (47%), Gaps = 75/530 (14%)
Query: 126 EKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFA 185
++ LS I G NV E + L+ + K +P + ++L P+Q++G ++
Sbjct: 557 DRTLSFIKGGNVLQEIVGKLLNKEF-----------KRKLVPKALNAELRPYQKEGFKWI 605
Query: 186 -----LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLN 240
L GG +LAD+MGLGKT+Q IA + ++++ P+S+ +W +++
Sbjct: 606 NEIIDLGFGG--VLADDMGLGKTLQIIAFLLSQKKSKSIVVV-PTSVIYNWMDEFEKF-- 660
Query: 241 IPPSEIVVVLSQLGGSNRS----------GFTIVSSNTKRNIPLDGLFNIISYDVVLKLQ 290
PS I V L S R G + N K + YDV+L
Sbjct: 661 -APS-IRVGLVHGSKSKRDKVLRDFKRGFGIKVEEENLKEK-------SYEKYDVLLTTY 711
Query: 291 NILMSS-------NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
L + +F I DE+ +KN A+ T + I K++ + L+GTP + +
Sbjct: 712 GTLKNDEKAYENLSFDYCIIDEAQNIKNPAAQATLSVKNI--KSRCNIALTGTPIENNLM 769
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVL 403
EL+ + + P + R+ SN EL +L+ ++RRLK+DVL
Sbjct: 770 ELWSIFDFVMPGYLFTKERFRERFI--------LDESNLSELKSLI-TPFILRRLKEDVL 820
Query: 404 AQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKI 463
++LP K ++ +++ K +Q+Y+ + ++ +K ++ KS E+ K + K+
Sbjct: 821 SELPEKLEKKYLVEMKGK-QKQLYSFY--VKAIKNQLNENKSSEKSGRDKINLFAYLTKL 877
Query: 464 -------------YTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKK 510
YT + +K+ V + ++ E+G K L+F+ +L I + F K+
Sbjct: 878 REICLDPSLVVPDYTGES-SKLTVVKEIVKDASESGKKILLFSQFTSVLKKIEEDFKKED 936
Query: 511 VHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPG 570
+ + +DGGT R +V F E ++K ++S+KAGGVGL LT+AS VI + W P
Sbjct: 937 ISYLYLDGGTYAKDRVEIVKNFNEDSNIKVFLISLKAGGVGLNLTSASVVIHFDPWWNPA 996
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
QA DRAHR GQ + V V L+A DT+++ + + K E + ++DG
Sbjct: 997 VEDQATDRAHRFGQENKVEVIKLVAKDTIEEKIVLMQEDKRELIQSLMDG 1046
>gi|402590468|gb|EJW84398.1| chromatin-remodeling complex ATPase chain isw-1 [Wuchereria
bancrofti]
Length = 1063
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 235/482 (48%), Gaps = 56/482 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDV- 216
++++ P +IE+ ++ +Q G+ + +LQH G +LADEMGLGKT+Q +AV +
Sbjct: 154 RFEKTPFYIENGEMRDYQIRGLNWLISLQHNGINGILADEMGLGKTLQTVAVIGFMKHYK 213
Query: 217 ---WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P L++ P S +W +W PS + L G ++ RN
Sbjct: 214 NASGPHLVIAPKSTLQNWINEFGKWC---PSLKAIALI--------GIAEARADLIRNEI 262
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
L G ++++ SY++VLK +++L ++ ++ DE+H +KN +K + K+++ L
Sbjct: 263 LPGKWDVLVTSYEMVLKEKSLLRKYAWQYLVIDEAHRIKNEHSKLSEIVREF--KSKHRL 320
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE---ELHNL 388
L++GTP + EL+ L L PD++ ++ + + + NH+ LH +
Sbjct: 321 LITGTPLQNNLHELWALLNFLLPDMFALASDFDSWFTNDMM-------GNHDLVSRLHKV 373
Query: 389 MKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSE 446
+K ++RRLK DV L K+ ++++ ++ K R+ Y L ++++VV G K K+
Sbjct: 374 LKP-FLLRRLKSDVEKTLLPKKEVKIYVGLS-KMQREWYTRILMKDIDVVNGAGKLEKAR 431
Query: 447 EEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFL 490
+ ++ + N Y D AE P D L + G + L
Sbjct: 432 --IMNILMHLRKCCNHPYLFDGAEPGPPYTTDQHLVDNSGKMVLLDKLLVKLKAQGSRVL 489
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGG 549
IF+ MLD + + R+DG T RQ + EF + D K +L+ +AGG
Sbjct: 490 IFSSMSRMLDLLEDYCWWRGYRYCRLDGQTVHDERQKSIDEFNKPDSDKFIFMLTTRAGG 549
Query: 550 VGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRS 609
+G+ LTAA VI + W P +QA DRAHRIGQ V V+ + ++TVD+ + +
Sbjct: 550 LGINLTAADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNTVDERIIERAEM 609
Query: 610 KL 611
KL
Sbjct: 610 KL 611
>gi|359457581|ref|ZP_09246144.1| SNF2 family helicase [Acaryochloris sp. CCMEE 5410]
Length = 1407
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 242/489 (49%), Gaps = 36/489 (7%)
Query: 158 DLREKYDQIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFR 214
D++ Q+P ++++L +Q++G + L H G LAD+MGLGKT+QA+AV
Sbjct: 934 DVQALQPQLPTTLQAELRDYQQEGFEWLARLSHWGVGACLADDMGLGKTLQALAVMLTRA 993
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P L++ P+S+ L+W + Q++ + P Q G S R + P
Sbjct: 994 PEGPALVIAPTSVGLNWISEAQRFAPTLRPL-------QFGTSQRQELL------DQLQP 1040
Query: 274 LDGLFNIISYDVVLK--LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
D L + SY ++ + + +L N+++++ DE+ +KN KR+ A + + +A++ L
Sbjct: 1041 FDLL--VCSYGLLQQEEVAQMLAQVNWQMIVLDEAQAIKNMTTKRSQAAMNL--QAEFKL 1096
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L +GTP + EL+ + P + ++ + ++ Q + L L++
Sbjct: 1097 LTTGTPIENHLGELWNLFRFINPGLLGSMERFNQQF--AAPIEKSQDPQARQRLKKLIQP 1154
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL------EVVKGKIKACKS 445
++RR K VL +LP + + ++++E++M AL R+ + K +
Sbjct: 1155 -FLLRRTKSQVLEELPSRTEITLQVELSEEEMALYEALRRKAIANLADSDAQAGAKHLQV 1213
Query: 446 EEEVQSLKFTEKNLINKIYTDS--AEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
E+ L+ T N + +S A AK+ + LE ++ K L+F+ L +
Sbjct: 1214 LAEIMKLRRTCCN-AQLVMPESPPASAKLQLFGEVLEELLANHHKALVFSQFVDHLKILQ 1272
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
KK++ +DG TP RQ V FQ + + ++S+KAGG GL LTAA VI
Sbjct: 1273 DYLDKKQIAYQYLDGSTPAKVRQQRVKAFQSGEG-EVFLISLKAGGTGLNLTAADYVIHM 1331
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
+ W P QA DRAHRIGQ V +Y L+A +T+++ + D+ R K + +L+G E
Sbjct: 1332 DPWWNPAVEDQASDRAHRIGQRRPVTIYRLVAKNTIEEKIVDLHRHKRDLADSLLEGTEI 1391
Query: 624 SLEVSSSQI 632
S ++S+ ++
Sbjct: 1392 SGKISTDEL 1400
>gi|156100755|ref|XP_001616071.1| helicase [Plasmodium vivax Sal-1]
gi|148804945|gb|EDL46344.1| helicase, putative [Plasmodium vivax]
Length = 1522
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 149/520 (28%), Positives = 235/520 (45%), Gaps = 58/520 (11%)
Query: 146 VQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQ 205
V+R I L E ++P I+ +LP+Q V F + GRIL+ DEMGLGKT+Q
Sbjct: 606 VRREIWGEIKNSCLEEIKKRLPRRIQKVILPYQLQSVYFFKEKNGRILIGDEMGLGKTLQ 665
Query: 206 AIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIV 264
AI + FR ++P LI+TPSSL+L+WA I+++L + PS+++VV GGSN
Sbjct: 666 AICIFHFFR-LYPTLIVTPSSLKLNWACEIEKFLPALDPSKVLVV----GGSN------- 713
Query: 265 SSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA----QAKRTAAT 320
+ R L + I+S+++ KL ++L NFK+VI DESHF++ Q++
Sbjct: 714 --DFPRGARLYRII-IVSFELYKKLAHLLNEINFKLVIVDESHFIRTVHYGKQSQLAKTI 770
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPD---VYKNVHEYGNRYCKGGVF---G 374
+KK + + LSGTP+++RPI ++ Q++ L KN +G +CK
Sbjct: 771 KGTLKKTKRVIFLSGTPSINRPINIYHQIKYLINSKRLFCKNKITFGEEFCKKYFCRGQK 830
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVL-AQLPVKRRQQVFL---DVAEKDMRQIYALF 430
I++ E H +K TVMIRR +V + P +R V+L D + +
Sbjct: 831 IFEENLRSWEFHLFLKKTVMIRRSISEVFTSNFPHLKRFFVYLPHGDYTIGSGNPVNSWS 890
Query: 431 RELEVVKGKIKACK-----SEEEVQSL--KFTEKNLIN-------KIYTDSAEAKIPAVL 476
G+ A + S+E QS+ FT N KI + E + V+
Sbjct: 891 PPRCTPSGEENALQSVGRDSKEGTQSVAPDFTPPNRKTLSEFFQVKIKSKKVEEGLSKVI 950
Query: 477 DYLETVIE--AGCKFLIFAHHQPMLDAIHQLFL-----KKKVHCIRID-----GGTPPAS 524
++ + E G K +IF +H + I + L KK+ + ID G
Sbjct: 951 HSMKYMEEHFPGKKKIIFCYHLTVCKCIEEELLKMIKRKKQTEQVIIDYVVLKGSLSEKE 1010
Query: 525 RQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQ 584
++ + F+ D + + ++ A GL T F E L Q E R R Q
Sbjct: 1011 KREKIQFFRMNDTCQYGIFTICAVSHGLDFTFCHLCFFLEFPVNFFHLQQCESRLFRKNQ 1070
Query: 585 VSSVNVYYLLANDTV--DDIVWDVVRSKLENLGQVLDGHE 622
V+Y L + + D W + ++DG E
Sbjct: 1071 QFDTYVFYFLLKNGLGSDYKTWRRFTLCAHSTRSIVDGTE 1110
>gi|385817690|ref|YP_005854080.1| Non-specific serine/threonine protein kinase [Lactobacillus
amylovorus GRL1118]
gi|327183628|gb|AEA32075.1| Non-specific serine/threonine protein kinase [Lactobacillus
amylovorus GRL1118]
Length = 1179
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 234/478 (48%), Gaps = 52/478 (10%)
Query: 160 REKYDQIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATC-- 212
R + D IP +++ L P+Q+ G + GG LLADEMGLGKT+Q IAV
Sbjct: 703 RIRRDAIPQTLQNTLRPYQKAGFNWLSTIINYNFGG--LLADEMGLGKTLQVIAVLLARK 760
Query: 213 --FRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKR 270
+ P L++ P+S+ +W A I+++ P V VL GGSN ++ K
Sbjct: 761 QQHKSNLPSLVIAPASVIYNWQAEIKKF---APELSVGVL---GGSNDERRNMLVHQNKY 814
Query: 271 NIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
++ I SY + + +F + I DE+ +KN Q+ TA ++ +IK AQ+
Sbjct: 815 DVL------ITSYQSLNHDLEAYHNLSFNLQILDEAQNIKNHQSI-TAQSVKVIK-AQHR 866
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
L L+GTP ++ EL+ + L P + ++ + F + ++L + +
Sbjct: 867 LALTGTPIENKLSELWSIFDYLMPGFLGSYVDFKKK------FEVPIVKKEDKDLESALS 920
Query: 391 ATV---MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE 447
TV ++RRLKKDVL LP K + + + + +K +Y L ++ + ++ + ++
Sbjct: 921 ETVAPFILRRLKKDVLKDLPAKDEEVIPIKMNQKQA-GLYHL--QMNKIIAQLNG-QDDD 976
Query: 448 EVQSLKF-------------TEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAH 494
+ + +F + +L+ Y ++ K+ A +D +++ +E G K L+F+
Sbjct: 977 DFKKFRFQILAQITKLREICCDPHLLYDNYHGKSD-KLKATIDLIKSNLENGHKILLFSQ 1035
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
MLD + + K KV + G TP RQ + F ++S+KAGG G+ L
Sbjct: 1036 FTSMLDILQEKLAKLKVPTFMLTGSTPKEKRQEDIQHFNSLKQPGVFLISLKAGGTGINL 1095
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
T+A VI + W QA DRAHRIGQ +SV +Y ++ DT+++ + + + K E
Sbjct: 1096 TSADVVIHYDPWWNIAAENQATDRAHRIGQKNSVKIYKMVTQDTIEERIIKLQQKKAE 1153
>gi|402828491|ref|ZP_10877378.1| bacterial SNF2 helicase associated [Slackia sp. CM382]
gi|402286299|gb|EJU34774.1| bacterial SNF2 helicase associated [Slackia sp. CM382]
Length = 1078
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 219/457 (47%), Gaps = 40/457 (8%)
Query: 165 QIPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAIAVATCFRD---- 215
++P + + L P+Q G R+ L GG +LADEMGLGKT+Q I + RD
Sbjct: 608 RVPVGLAATLRPYQEAGFRWMSHLMDLGFGG--ILADEMGLGKTLQLICLLLARRDEARA 665
Query: 216 VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P L++ P+SL +WAA +++ P + VV +G V + +R D
Sbjct: 666 TGPSLVVCPASLVYNWAAEFERF--APDLRVAVV---------AGDADVRAEARRGADAD 714
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
+F I SYD++ + F DE+ ++KN + + A+ I A + + L+G
Sbjct: 715 -VF-ITSYDLLKRDIEDYAGMRFWCEALDEAQYVKNHETQAAASVKAI--DAAHRIALTG 770
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMI 395
TP +R E++ + L P + + + +R+ + G + A+ L ++
Sbjct: 771 TPIENRVSEVWSIFDYLMPGLLGSYTRFRDRFEAPIMDGDEEAAARLSAL----VGPFIL 826
Query: 396 RRLKKDVLAQLPVKRRQQVF--LDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL- 452
RR K DVL LP K V+ L+ ++ + Q + +++ + S +V+ L
Sbjct: 827 RRRKADVLTDLPEKWESIVYARLEGEQRALYQAHEQMLRMKIAHEGEEGDDSRSKVEILA 886
Query: 453 KFTEKNLI----NKIYTD--SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLF 506
+ T I + +Y D AK A++D + + I +G K L+F+ LD I
Sbjct: 887 ELTRLRQIALDPSLLYADYRGGGAKEQAIMDTIASCIASGEKMLVFSQFTSYLDIIGAKL 946
Query: 507 LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELS 566
++ V I G TP R ALV F DD ++S+KAGG GL LT AS V+ A+
Sbjct: 947 SEQGVKHYVITGSTPKKKRLALVDAFN-ADDTPIFLISLKAGGTGLNLTGASVVLHADPW 1005
Query: 567 WTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIV 603
W QA DRAHR+GQ VNVY ++A DT+++ +
Sbjct: 1006 WNAAAQNQATDRAHRMGQTRIVNVYRVIAKDTIEERI 1042
>gi|240281557|gb|EER45060.1| transcriptional accessory protein [Ajellomyces capsulatus H143]
Length = 1913
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 148/543 (27%), Positives = 244/543 (44%), Gaps = 104/543 (19%)
Query: 165 QIPAHIESKLLPFQRDGV-------RFALQHGGRILLADEMGLGKTIQAIAVATCFRDV- 216
+IP I+++L +Q++GV R+ L HG +L D+MGLGKT+Q + + +
Sbjct: 1313 EIPVAIKAELRSYQQEGVNWLAFLNRYHL-HG---ILCDDMGLGKTLQTLCIVASDHHMR 1368
Query: 217 --------------WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFT 262
P LI+ P +L HW I+Q+ + + L+ +G
Sbjct: 1369 SEEFARTGAPEARRLPSLIICPPTLSGHWQQEIKQY-----APFLSCLAYVGAP------ 1417
Query: 263 IVSSNTKRNIPLDGL-FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATL 321
S +K L + I SYD+ ++ + N+ + DE H +KN +AK T A
Sbjct: 1418 --SERSKLRGSLGSVDIVITSYDICRNDNDVFVPLNWNYCVLDEGHLIKNPKAKITLAVK 1475
Query: 322 PIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASN 381
+ K+ + L+LSGTP + +EL+ + L P + +R+ K + +S+
Sbjct: 1476 RL--KSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASQFSKSSS 1533
Query: 382 HEE------LHNLMKATV--MIRRLKKDVLAQLPVKRRQQVFLDVAE------------- 420
E+ + L K + ++RRLK++VL LP K Q + D+++
Sbjct: 1534 KEQEVGALAIEALHKQVLPFLLRRLKEEVLNDLPPKILQNYYCDLSDLQRKLFEDFTKKE 1593
Query: 421 -KDMRQIYA---------LFRELEVVKGKIKACKS-----EEEVQSLKFTEKNLI--NKI 463
KD+ +I +F+ L+ ++ + C S +E + +K+L N
Sbjct: 1594 QKDITKIVGSTDKEAKQHIFQALQYMR---RLCNSPALVVKESHKQYDEIQKSLAAKNSH 1650
Query: 464 YTDSAEA-KIPAVLDYL-----------ETVIEAGCKF------LIFAHHQPMLDAIHQL 505
D A A K+ A+ D L E ++ G + L+F + MLD +
Sbjct: 1651 IRDVAHAPKLIALRDLLVDCGIGVDPSTEGELDTGASYVSPHRALVFCQMKEMLDIVQND 1710
Query: 506 FLKK---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIF 562
LKK V +R+DG RQ++V +F +L+ GG+GL LT A TVIF
Sbjct: 1711 VLKKLLPSVQFLRLDGSVEATKRQSIVNQFNTDPSYDVLLLTTSVGGLGLNLTGADTVIF 1770
Query: 563 AELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
E W P IQA DRAHRIGQ VNVY L+ T+++ + ++ R K++ V++
Sbjct: 1771 VEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVNQQN 1830
Query: 623 NSL 625
L
Sbjct: 1831 AGL 1833
>gi|440680991|ref|YP_007155786.1| SNF2-related protein [Anabaena cylindrica PCC 7122]
gi|428678110|gb|AFZ56876.1| SNF2-related protein [Anabaena cylindrica PCC 7122]
Length = 1403
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 139/483 (28%), Positives = 232/483 (48%), Gaps = 44/483 (9%)
Query: 165 QIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
++P+ +++L +Q DG + L H G LAD+MGLGKT+QA+AV P LI
Sbjct: 937 ELPSTFQAELRDYQMDGFCWLARLAHWGVGACLADQMGLGKTVQALAVILRNAHAGPTLI 996
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL---- 277
+ P+S+ ++W + Q++ P I+ Q G+NR LDGL
Sbjct: 997 IAPTSVCMNWVSEAQKF--APTLNIM----QFSGANRQKL------------LDGLQPLD 1038
Query: 278 FNIISYDVVLK--LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
I SY ++ + + +L +++ ++ DE+ +KN KR+ A + + K+ + LL +G
Sbjct: 1039 MLICSYGLLQQEEVSQMLAQVDWQTIVLDEAQAIKNMSTKRSQAAMNL--KSSFKLLTTG 1096
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMI 395
TP + EL+ + P + + + R+ YQ +L L++ ++
Sbjct: 1097 TPIENHLGELWNLFRFINPGLLGSFESFNQRF--ANPIEKYQDKQARNKLKKLIQP-FLL 1153
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVA-EKDMRQIYALFRELEVVK-GKIKACKSEEEVQSLK 453
RR K VL +LP R ++ L V K+ + Y R + K + A ++ +Q L
Sbjct: 1154 RRTKNQVLEELP--SRTEILLHVELSKEEKAFYEALRRQAISKLTESNADAGQKHLQVLA 1211
Query: 454 FTEK---NLINKIY----TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLF 506
K N T+ + +K+ + L+ ++E K L+F+ L I
Sbjct: 1212 EIMKLRRACCNPSLVMPDTELSSSKLQLFGEVLDELLENRHKALVFSQFVDHLHIIRDYL 1271
Query: 507 LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELS 566
K+ + +DG TP A R+ V FQ D ++S+KAGG GL LTAA VI +
Sbjct: 1272 DKQSIKYQYLDGSTPMAERKRSVDAFQAGDG-DVFLISLKAGGTGLNLTAADYVIHTDPW 1330
Query: 567 WTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
W P QA DRAHRIGQ V +Y L+A DT++D + ++ K + +L+G + S +
Sbjct: 1331 WNPAVEDQASDRAHRIGQQRPVTIYRLVAKDTIEDKIVELHHHKRDLADSLLEGTDMSGK 1390
Query: 627 VSS 629
+S+
Sbjct: 1391 IST 1393
>gi|256419374|ref|YP_003120027.1| SNF2-like protein [Chitinophaga pinensis DSM 2588]
gi|256034282|gb|ACU57826.1| SNF2-related protein [Chitinophaga pinensis DSM 2588]
Length = 1354
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 239/485 (49%), Gaps = 31/485 (6%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
+IPA ++++L P+Q +G R+ + G LAD+MGLGKTIQAIA+ P L+
Sbjct: 887 EIPATLQTQLRPYQEEGFRWMARLAAWGAGACLADDMGLGKTIQAIAMLLYRAHEGPALV 946
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
+ P+S+ +W + + PS + + Q+ GS R + P D + +I
Sbjct: 947 VCPASVLPNW---VNELYKFAPS---LQVRQIAGSKRHAILKAAG------PFDVV--LI 992
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSR 341
+Y ++ +L + V+ DE+H +KN Q K + A + + +A + L+L+GTP +
Sbjct: 993 TYGILQSEDELLSVIPWNTVVLDEAHTIKNYQTKTSKAAMAL--QAGFRLILTGTPVQNH 1050
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKD 401
E++ + P + ++ + ++ ++ + H L ++ A M+RR K
Sbjct: 1051 LTEIWNLFNFINPGLLGSLPYFNKQFTTPVIYNAESTVTKH--LRKIV-APFMLRRTKTA 1107
Query: 402 VLAQLPVKRRQQVFLDVAEKDMRQIYAL-FRELEVVKGKIKACKSEEEVQSLKFTEKNLI 460
VL +LP K + ++ ++ AL + +E +K K S+ + +L K +
Sbjct: 1108 VLDELPEKTEIVKMISLSPEEAAFYEALRLKAVENIKRYSKDKTSKHNLNTLTEIGKLRM 1167
Query: 461 NKIYTD--SAEAKIPA-----VLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHC 513
T E +IP+ ++ ++ +I+ + L+F+ + LD + + V
Sbjct: 1168 AACNTQMIDPEIRIPSSKLAVFIEIVKELIDNNHRALVFSQYVKHLDLVRLALDELNVSY 1227
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
+DG TP R+ +V EFQ ++S+KAGG GL LTAA VI + W P
Sbjct: 1228 CYLDGSTPIPVRERVVKEFQAGAG-SLFLISLKAGGTGLNLTAADYVIHLDPWWNPAIEE 1286
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIR 633
QA DRA+RIGQ V +Y L+ T+++ + + SK + ++L+G + S ++S+ ++
Sbjct: 1287 QASDRAYRIGQTRPVTIYRLVTRHTIEEKIIALHNSKRDLADRLLEGSDISGKLSTDELL 1346
Query: 634 SSPAK 638
S AK
Sbjct: 1347 SLIAK 1351
>gi|168216008|ref|ZP_02641633.1| putative helicase [Clostridium perfringens NCTC 8239]
gi|182381656|gb|EDT79135.1| putative helicase [Clostridium perfringens NCTC 8239]
Length = 1065
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 236/490 (48%), Gaps = 64/490 (13%)
Query: 166 IPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
+P + ++L P+Q++G ++ L GG +LAD+MGLGKT+Q IA + ++
Sbjct: 584 VPKALNAELRPYQKEGFKWINEITDLGFGG--VLADDMGLGKTLQIIAFLLSQKKSKSIV 641
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRS----------GFTIVSSNTKR 270
++ P+S+ +W +++ PS I + L S R G I N K
Sbjct: 642 VV-PTSVIYNWMDEFEKF---APS-IRIGLVHGSKSKRDKVLREFKRGLGIKIEEDNLKE 696
Query: 271 NIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPI 323
+ YDV+L L + +F I DE+ +KN A+ T + I
Sbjct: 697 K-------SYEKYDVLLTTYGTLKNDEKAYENLSFDYCIIDEAQNIKNPAAQATLSVKNI 749
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE 383
K++ + L+GTP + +EL+ + + P + R+ SN
Sbjct: 750 --KSRCNIALTGTPIENNLMELWSIFDFVMPGYLFTKERFRERFI--------LDESNLS 799
Query: 384 ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC 443
EL L+ ++RRLK+DVL++LP K ++ +++ K +Q+Y+ + ++ +K ++
Sbjct: 800 ELKYLI-TPFILRRLKEDVLSELPEKLEKKYLVEMKGK-QKQLYSFY--VKAIKNQLNEN 855
Query: 444 KSEEEVQSLKFTEKNLINKI-------------YTDSAEAKIPAVLDYLETVIEAGCKFL 490
KS E+ K + + K+ YT +K+ V + ++ E+G K L
Sbjct: 856 KSSEKSGRDKINLFSYLTKLREICLDPSLVVPDYT-GGSSKLTVVKEIVKDASESGKKIL 914
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGV 550
+F+ +L I + F K+ + + +DGGT R V +F E ++K ++S+KAGGV
Sbjct: 915 LFSQFTSVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGV 974
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
GL LT+AS VI + W P QA DRAHR GQ + V V L+A DT+++ + + K
Sbjct: 975 GLNLTSASVVIHFDPWWNPAVEDQATDRAHRFGQENKVEVIKLVAKDTIEEKIVLMQEDK 1034
Query: 611 LENLGQVLDG 620
E + ++DG
Sbjct: 1035 RELIQSLMDG 1044
>gi|168209499|ref|ZP_02635124.1| putative helicase [Clostridium perfringens B str. ATCC 3626]
gi|170712417|gb|EDT24599.1| putative helicase [Clostridium perfringens B str. ATCC 3626]
Length = 1067
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 237/490 (48%), Gaps = 64/490 (13%)
Query: 166 IPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
+P + ++L P+Q++G ++ L GG +LAD+MGLGKT+Q IA + ++
Sbjct: 586 LPKALNAELRPYQKEGFKWINEITDLGFGG--VLADDMGLGKTLQIIAFLLSQKKSKSIV 643
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRS----------GFTIVSSNTKR 270
++ P+S+ +W +++ PS I V L S R G I N K
Sbjct: 644 VV-PTSVIYNWMDEFEKF---APS-IRVGLVHGSKSKRDKVLRDFKRGLGIKIEEENLKE 698
Query: 271 NIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPI 323
+ YDV+L L + +F I DE+ +KN A+ T + I
Sbjct: 699 K-------SYEKYDVLLTTYGTLKNDEKAYENLSFDYCIIDEAQNIKNPSAQATLSVKNI 751
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE 383
K++ + L+GTP + +EL+ + + P + R+ SN
Sbjct: 752 --KSRCNIALTGTPIENNLMELWSIFDFVMPGYLFTKERFRERFI--------LDESNLS 801
Query: 384 ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC 443
EL +L+ ++RRLK+DVL++LP K ++ +++ K +Q+Y+ + ++ +K ++
Sbjct: 802 ELKSLI-TPFILRRLKEDVLSELPEKLEKKYLVEMKGK-QKQLYSFY--VKAIKNQLNEN 857
Query: 444 KSEEEVQSLKFTEKNLINKI-------------YTDSAEAKIPAVLDYLETVIEAGCKFL 490
KS E+ K + K+ YT + +K+ V + ++ E+G K L
Sbjct: 858 KSSEKSGRDKINLFAYLTKLREICLDPSLVVPDYTGES-SKLTVVKEIVKDASESGKKIL 916
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGV 550
+F+ +L I + F K+ + + +DGGT R V +F E ++K ++S+KAGGV
Sbjct: 917 LFSQFTSVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGV 976
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
GL LT+AS VI + W P QA DRAHR GQ + V V L+A DT+++ + + K
Sbjct: 977 GLNLTSASVVIHFDPWWNPAVEDQATDRAHRFGQENKVEVIKLVAKDTIEEKIVLMQEDK 1036
Query: 611 LENLGQVLDG 620
E + ++DG
Sbjct: 1037 RELIQSLMDG 1046
>gi|257094070|ref|YP_003167711.1| Non-specific serine/threonine protein kinase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046594|gb|ACV35782.1| Non-specific serine/threonine protein kinase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 1400
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 217/466 (46%), Gaps = 45/466 (9%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQ-----HGGRILLADEMGLGKTIQAIAVATCFRDVWPV 219
++P+ +++ L P+Q DG ++A++ GG LAD+MGLGKT+QA+ V P
Sbjct: 931 KLPSLLQATLRPYQEDGYQWAIRLATAGMGG--CLADDMGLGKTLQALGVLLERAAGGPA 988
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
L++ P+S+ +W A Q+ P+ + S+ G S R +VS +++
Sbjct: 989 LVIAPTSVCGNWLAEAQR---FAPTLNARIYSEAGDSERD--ELVSQAGPQDV------L 1037
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
I+SY ++L Q + ++ADE+ +KNA AKR+ A + A + L ++GTP
Sbjct: 1038 IVSYTLLLLAQERFAGRTWHTLVADEAQAIKNAAAKRSQAVFELT--ADFRLAMTGTPVE 1095
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK--ATVMIRR 397
+R +L+ + P + +VH + R+ G + + E H L + ++RR
Sbjct: 1096 NRLADLWSIMRFANPGLLGSVHRFNERFA-----GPIERNRDREAQHVLKRLVGPFILRR 1150
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT-- 455
K +VL LP R ++ L V + + E + E Q+ +F
Sbjct: 1151 TKSEVLQDLPP--RTELILTVTPEAAEAAHYEALRREAASDIDATLDAAPEAQA-RFNIL 1207
Query: 456 -----------EKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
+ L N + + AK+ A + +I G K L+F+ L + +
Sbjct: 1208 AQLTRLRRAACDPRLCNPEFGITG-AKVQAFAELASELIANGHKALVFSQFVDFLQVLRE 1266
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
+ VH +DG TP A R V FQ + ++S+KAGG GL LTAA V+ +
Sbjct: 1267 PLDESGVHYQYLDGATPAAERSRRVAAFQAGEG-DLFLISLKAGGFGLNLTAADYVVITD 1325
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
W P QA RAHRIGQ+ V VY L+ TV++ + D+ K
Sbjct: 1326 PWWNPAAEDQAMGRAHRIGQLRPVTVYRLVTRGTVEERIVDLHHEK 1371
>gi|293375830|ref|ZP_06622099.1| SNF2 family N-terminal domain protein [Turicibacter sanguinis PC909]
gi|292645538|gb|EFF63579.1| SNF2 family N-terminal domain protein [Turicibacter sanguinis PC909]
Length = 1080
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 235/484 (48%), Gaps = 47/484 (9%)
Query: 140 ENLHPLVQRAIASASAAPDLREKYDQI-PAHIESKLLPFQRDGVRF-----ALQHGGRIL 193
E LH + + S L E D I P ++ L +Q+ G R+ Q GG +
Sbjct: 580 ETLHAVRDASFKSMVREFKLVEDADFIVPEPLQKTLRRYQKTGFRWIKTLAKYQMGG--I 637
Query: 194 LADEMGLGKTIQAIAV--ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLS 251
LAD+MGLGKT+Q I+V + P LI+ PSSL +W + I ++ PS V++++
Sbjct: 638 LADDMGLGKTLQIISVLLSEQSESTKPSLIVAPSSLIYNWKSEIGKF---APSLNVLIVT 694
Query: 252 QLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKN 311
G +++++T ++ I SYD++ + + + ++ I DE+HF+KN
Sbjct: 695 ---GEPTVRQDLINTSTDYDVV------ITSYDLIRRDIEVYETQQYRFCILDEAHFIKN 745
Query: 312 AQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGG 371
+ + I + ++AL +GTP + +L+ + + P + + ++ +Y
Sbjct: 746 HTTQNAKSVKRIRSEVRFAL--TGTPIENSLADLWSIFDFILPGYFGSYSQFKKKYEAPI 803
Query: 372 VFGIYQGASNHEELHNLMK-----ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI 426
V H LH L + A ++RRLKKDVL +LP K V+ ++ +
Sbjct: 804 V--------KHHHLHLLTRIHQQVAPFILRRLKKDVLKELPDKIETNVYCEMGKTQRDLY 855
Query: 427 YALF----RELEVVKGKIKACKSEEEVQSLKFTEKNLIN--KIYTDS---AEAKIPAVLD 477
YA+ +E+ ++ +S ++ +L + L +Y ++ AK+ +
Sbjct: 856 YAMLSQMKQEMHHEIEEVGVERSRIKILALLMRLRQLCCHPSLYLENYRGESAKLNLCMQ 915
Query: 478 YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD 537
++ I +G K LIF+ ML+ + + K++ + + G T + R AL +F + DD
Sbjct: 916 LVQDCIASGHKVLIFSQFTSMLEILGRELKAKEIKFLTLTGATKTSDRLALTEQFNQ-DD 974
Query: 538 VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAND 597
K ++S+KAGG GL LT A VI + W QA DRAHR+GQ +V V+ L+ +
Sbjct: 975 TKVFLISLKAGGTGLNLTGADVVIHYDPWWNMSAQNQATDRAHRLGQDKTVQVFKLMVKN 1034
Query: 598 TVDD 601
T+++
Sbjct: 1035 TIEE 1038
>gi|19704495|ref|NP_604057.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19714769|gb|AAL95356.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 1089
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 147/538 (27%), Positives = 258/538 (47%), Gaps = 54/538 (10%)
Query: 130 SEISGYNVEIENLHP----LVQRAIASASAAPDLREKYDQ----IPAHIESKLLPFQRDG 181
S++ N++I N ++Q D + ++Q IP+ + L +Q G
Sbjct: 581 SDLKKGNIKIPNFRAYQLNVLQNKYMDIEKNQDFNKLFEQKVIEIPSKYKKILREYQIVG 640
Query: 182 VRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQ 236
V + A+ GG +LAD+MGLGKT+Q I + LI+TP+SL L+W
Sbjct: 641 VEWMLKLRAMNLGG--ILADDMGLGKTLQVITYLESVKRERACLIVTPASLILNWENEFN 698
Query: 237 QWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSS 296
++ + V+ LS G +R ++ SN K + I SYD + + ++ +
Sbjct: 699 KF-----NSSVLTLSIYG--DRKNREVLLSNLKNEVV------ITSYDYLKRDMDLYENI 745
Query: 297 NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDV 356
+F +I DE+ ++KN + K A I +++ L L+GTP + E++ + L
Sbjct: 746 DFDTIILDEAQYIKNHKTKVAQAVKKI--NSKFKLALTGTPLENSLAEIWSIFDFLMNGY 803
Query: 357 YKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFL 416
N + Y K V + + E L N+++ ++ RRLKKDVL +LP K + ++
Sbjct: 804 LFNYDYFYKNYEKAIVLQTEKRVT--ERLKNMVEPFIL-RRLKKDVLKELPEKIEETYYV 860
Query: 417 DVAEKDMRQIY---------ALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDS 467
D+ +++ +++Y L + ++V KI+ +++ + + L + S
Sbjct: 861 DMNQEE-KKLYQANLIKINETLAQNIDVNTNKIEVLAMLTKLRQICIDPRLLYEDV--SS 917
Query: 468 AEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQA 527
+ +KI A ++ +E IE K L+F+ +LD + Q + + G T R+
Sbjct: 918 SSSKINACIELIEKSIENNQKILLFSSFTTVLDLVAQECDNLSIPYFMLTGETNKVKRKE 977
Query: 528 LVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSS 587
+V FQ + V ++S+KAGG GL LT AS VI + W QA DRAHRIGQ +
Sbjct: 978 MVENFQ-NEAVPLFLISLKAGGTGLNLTKASVVIHLDPWWNISAQNQATDRAHRIGQEDT 1036
Query: 588 VNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSF 645
V V+ L+ +T+++ + + ++SK + L + +E S SS K++ LD F
Sbjct: 1037 VQVFNLITKNTIEEKILN-LQSKKKELSDIF------VENSKGSF-SSLTKEQLLDLF 1086
>gi|410621116|ref|ZP_11331969.1| helicase [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410159416|dbj|GAC27343.1| helicase [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 1431
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 145/523 (27%), Positives = 244/523 (46%), Gaps = 55/523 (10%)
Query: 142 LHPLVQRAIASASAAPDLR--EKYDQ--------------IPAHIESKLLPFQRDGVRFA 185
HPL I A+A ++ +DQ IP+ +++L +Q +G +A
Sbjct: 916 FHPLASLQIEEATAGMRMKTIHAWDQQTRKMRQANTIEPKIPSTFQAQLRDYQLEGFDWA 975
Query: 186 --LQH-GGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIP 242
L H G LAD+MGLGKT+QA+AV P L++ P+S+ +W Q+ +
Sbjct: 976 SRLAHWGAGACLADDMGLGKTLQALAVLLSRAGQGPSLVIAPTSVCFNWH---QEAIKFT 1032
Query: 243 PSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN-----IISYDVVLKLQNILMSSN 297
P+ + + + S+NT++ + L N IISY ++ + NIL +
Sbjct: 1033 PTLNIKLFAD------------STNTEQRMGLLNDLNPFDCVIISYGLLQRETNILKTVQ 1080
Query: 298 FKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVY 357
+ ++ADE+ LKN KRT A + + K ++ ++ +GTP + EL+ + P +
Sbjct: 1081 WHTIVADEAQALKNPLTKRTKAAMAL--KGEFKMITTGTPIENDLTELWSLFRFINPGLL 1138
Query: 358 KNVHEYGNRYC---KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQ-- 412
N+ +G R+ + + L L++ ++ RR+K VL +LP +
Sbjct: 1139 GNLKRFGERFSSPIENAKEDKLAARKASQGLKTLIQPFIL-RRMKNQVLTELPPRTEINI 1197
Query: 413 QVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL----KFTEKNLINKIY---T 465
QV + E+D + L + + +A E+ ++ L K + K+ T
Sbjct: 1198 QVEMSPKERDFYEALRLNAIDNISQSGQQANPGEQRIRMLAELVKLRQACCNPKLVMAET 1257
Query: 466 DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASR 525
D AK+ A+ + L+ + K LIF+ L I + K +DG TP R
Sbjct: 1258 DIPSAKLAALSELLDELKVNNHKALIFSQFVGHLQLIKKHIEAKGFSYQYLDGSTPQKDR 1317
Query: 526 QALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQV 585
Q V FQ + ++S+KAGG GL LTAA VI + W P QA DRAHRIGQ
Sbjct: 1318 QKRVNAFQSGEG-DIFLISLKAGGSGLNLTAADYVIHMDPWWNPAVEEQASDRAHRIGQK 1376
Query: 586 SSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
V +Y L+A +T+++ + + + K + ++L G+E ++S
Sbjct: 1377 RPVTIYRLIAKNTIEEKIVALHKHKRDLADKLLSGNEAVTKLS 1419
>gi|110800073|ref|YP_695594.1| helicase [Clostridium perfringens ATCC 13124]
gi|110674720|gb|ABG83707.1| putative helicase [Clostridium perfringens ATCC 13124]
Length = 1069
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 237/490 (48%), Gaps = 64/490 (13%)
Query: 166 IPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
+P + ++L P+Q++G ++ L GG +LAD+MGLGKT+Q IA + ++
Sbjct: 588 LPKALNAELRPYQKEGFKWINEITDLGFGG--VLADDMGLGKTLQIIAFLLSQKKSKSIV 645
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRS----------GFTIVSSNTKR 270
++ P+S+ +W +++ PS I V L S R G I N K
Sbjct: 646 VV-PTSVIYNWMDEFEKF---APS-IRVGLVHGSKSKRDKVLRDFKRGLGIKIEEENLKE 700
Query: 271 NIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPI 323
+ YDV+L L + +F I DE+ +KN A+ T + I
Sbjct: 701 K-------SYEKYDVLLTTYGTLKNDEKAYENLSFDYCIIDEAQNIKNPSAQATLSVKNI 753
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE 383
K++ + L+GTP + +EL+ + + P + R+ SN
Sbjct: 754 --KSRCNIALTGTPIENNLMELWSIFDFVMPGYLFTKERFRERFI--------LDESNLS 803
Query: 384 ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC 443
EL +L+ ++RRLK+DVL++LP K ++ +++ K +Q+Y+ + ++ +K ++
Sbjct: 804 ELKSLI-TPFILRRLKEDVLSELPEKLEKKYLVEMKGK-QKQLYSFY--VKAIKNQLNEN 859
Query: 444 KSEEEVQSLKFTEKNLINKI-------------YTDSAEAKIPAVLDYLETVIEAGCKFL 490
KS E+ K + K+ YT + +K+ V + ++ E+G K L
Sbjct: 860 KSSEKSGRDKINLFAYLTKLREICLDPSLVVPDYTGES-SKLTVVKEIVKDASESGKKIL 918
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGV 550
+F+ +L I + F K+ + + +DGGT R V +F E ++K ++S+KAGGV
Sbjct: 919 LFSQFTSVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGV 978
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
GL LT+AS VI + W P QA DRAHR GQ + V V L+A DT+++ + + K
Sbjct: 979 GLNLTSASVVIHFDPWWNPAVEDQATDRAHRFGQENKVEVIKLVAKDTIEEKIVLMQEDK 1038
Query: 611 LENLGQVLDG 620
E + ++DG
Sbjct: 1039 RELIQSLMDG 1048
>gi|422345598|ref|ZP_16426512.1| hypothetical protein HMPREF9476_00585 [Clostridium perfringens
WAL-14572]
gi|373228323|gb|EHP50633.1| hypothetical protein HMPREF9476_00585 [Clostridium perfringens
WAL-14572]
Length = 1067
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 237/488 (48%), Gaps = 60/488 (12%)
Query: 166 IPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
+P + ++L P+Q++G ++ L GG +LAD+MGLGKT+Q IA + ++
Sbjct: 586 VPKALNAELRPYQKEGFKWINEIIDLGFGG--VLADDMGLGKTLQIIAFLLSQKKSKSIV 643
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRS--------GFTIVSSNTKRNI 272
++ P+S+ +W +++ P +I +V +++ G I N K
Sbjct: 644 VV-PTSVIYNWMDEFEKF--APSIKIGLVHGSKSKRDKALRDFKRGLGIKIEEENLKEK- 699
Query: 273 PLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPIIK 325
+ YDV+L L + +F I DE+ +KN A+ T + I
Sbjct: 700 ------SYEKYDVLLTTYGTLKNDEKAYENLSFDYCIIDEAQNIKNPAAQATLSVKNI-- 751
Query: 326 KAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEEL 385
K++ + L+GTP + +EL+ + + P + R+ SN EL
Sbjct: 752 KSRCNIALTGTPIENNLMELWSIFDFVMPGYLFTKERFRERFI--------LDESNLSEL 803
Query: 386 HNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKS 445
+L+ ++RRLK+DVL++LP K ++ +++ K +Q+Y+ + ++ +K ++ KS
Sbjct: 804 KSLI-TPFILRRLKEDVLSELPEKLEKKYLVEMKGK-QKQLYSFY--VKAIKNQLNENKS 859
Query: 446 EEEVQSLKFTEKNLINKI-------------YTDSAEAKIPAVLDYLETVIEAGCKFLIF 492
E+ K + K+ YT +K+ V + ++ E+G K L+F
Sbjct: 860 SEKSGRDKINLFAYLTKLREICLDPSLVVPDYT-GGSSKLTVVKEIVKDASESGKKILLF 918
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGL 552
+ +L I + F K+ + + +DGGT R V +F E ++K ++S+KAGGVGL
Sbjct: 919 SQFTSVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGVGL 978
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
LT+AS VI + W P QA DRAHR GQ + V V L+A DT+++ + + K E
Sbjct: 979 NLTSASVVIHFDPWWNPAVEEQATDRAHRFGQENKVEVIKLVAKDTIEEKIVLMQEDKRE 1038
Query: 613 NLGQVLDG 620
+ ++DG
Sbjct: 1039 LIQSLMDG 1046
>gi|225556696|gb|EEH04984.1| transcriptional accessory protein [Ajellomyces capsulatus G186AR]
Length = 1984
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 148/543 (27%), Positives = 244/543 (44%), Gaps = 104/543 (19%)
Query: 165 QIPAHIESKLLPFQRDGV-------RFALQHGGRILLADEMGLGKTIQAIAVATCFRDV- 216
+IP I+++L +Q++GV R+ L HG +L D+MGLGKT+Q + + +
Sbjct: 1384 EIPVAIKAELRSYQQEGVNWLAFLNRYHL-HG---ILCDDMGLGKTLQTLCIVASDHHMR 1439
Query: 217 --------------WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFT 262
P LI+ P +L HW I+Q+ + + L+ +G
Sbjct: 1440 SEEFARTGAPEARRLPSLIICPPTLSGHWQQEIKQY-----APFLSCLAYVGAP------ 1488
Query: 263 IVSSNTKRNIPLDGL-FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATL 321
S +K L + I SYD+ ++ + N+ + DE H +KN +AK T A
Sbjct: 1489 --SERSKLRGSLGSVDIVITSYDICRNDNDVFVPLNWNYCVLDEGHLIKNPKAKITLAVK 1546
Query: 322 PIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASN 381
+ K+ + L+LSGTP + +EL+ + L P + +R+ K + +S+
Sbjct: 1547 RL--KSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASQFSKSSS 1604
Query: 382 HEE------LHNLMKATV--MIRRLKKDVLAQLPVKRRQQVFLDVAE------------- 420
E+ + L K + ++RRLK++VL LP K Q + D+++
Sbjct: 1605 KEQEVGALAIEALHKQVLPFLLRRLKEEVLNDLPPKILQNYYCDLSDLQRKLFEDFTKKE 1664
Query: 421 -KDMRQIYA---------LFRELEVVKGKIKACKS-----EEEVQSLKFTEKNLI--NKI 463
KD+ +I +F+ L+ ++ + C S +E + +K+L N
Sbjct: 1665 QKDIAKIVGSTDKEAKQHIFQALQYMR---RLCNSPALVVKESHKQYDEIQKSLAAKNSH 1721
Query: 464 YTDSAEA-KIPAVLDYL-----------ETVIEAGCKF------LIFAHHQPMLDAIHQL 505
D A A K+ A+ D L E ++ G + L+F + MLD +
Sbjct: 1722 IRDVAHAPKLIALRDLLVDCGIGVDPSTEGELDTGASYVSPHRALVFCQMKEMLDIVQND 1781
Query: 506 FLKK---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIF 562
LKK V +R+DG RQ++V +F +L+ GG+GL LT A TVIF
Sbjct: 1782 VLKKLLPSVQFLRLDGSVEATKRQSIVNQFNTDPSYDVLLLTTSVGGLGLNLTGADTVIF 1841
Query: 563 AELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
E W P IQA DRAHRIGQ VNVY L+ T+++ + ++ R K++ V++
Sbjct: 1842 VEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVNQQN 1901
Query: 623 NSL 625
L
Sbjct: 1902 AGL 1904
>gi|443692402|gb|ELT93996.1| hypothetical protein CAPTEDRAFT_18898 [Capitella teleta]
Length = 910
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 240/489 (49%), Gaps = 49/489 (10%)
Query: 152 SASAAPDLREKYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAI 207
S A+ + +++ P++I+ ++ +Q G+ + + +HG +LADEMGLGKT+Q I
Sbjct: 40 SRKASTPVITRFESSPSYIKGGEMRDYQVRGLNWMISLYEHGINGILADEMGLGKTLQTI 99
Query: 208 AV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTI 263
++ +R++ P LI+ P S ++W A +++W P+ + L +G + I
Sbjct: 100 SLLGYMKHYRNIPSPHLIIAPKSTLMNWMAELERWC---PTLRSICL--IGDQEKRAAMI 154
Query: 264 VSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATL 321
R+ L G +++ SY++V+K +++ N++ ++ DE+H +KN ++K +
Sbjct: 155 ------RDEILPGEWDVCVSSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVR 208
Query: 322 PIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASN 381
K+ LLL+GTP + EL+ L L PDV+ + ++ + + F +
Sbjct: 209 EF--KSASRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFNTSNCF---ENDDL 263
Query: 382 HEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGK 439
LH +++ ++RR+K DV +L K+ +V++ ++ K R+ Y L ++++VV G
Sbjct: 264 VTRLHAVLRP-FLLRRIKADVEKRLLPKKETKVYIGLS-KMQREWYTKILMKDIDVVNGA 321
Query: 440 IKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVI 483
K+ K + ++ + N Y D AE P D L +
Sbjct: 322 GKSDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDQHLVDNCGKMVLLDKLLPKLQ 379
Query: 484 EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-V 542
E + LIF+ +LD + K + R+DG T RQ + EF + K +
Sbjct: 380 EQDSRVLIFSQMTRILDILEDYCYWKNYNYCRLDGQTAHEDRQKSINEFNAPNSTKFVFM 439
Query: 543 LSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDI 602
LS +AGG+G+ L A V+ + W P +QA DRAHRIGQ V V+ L +TV++
Sbjct: 440 LSTRAGGLGINLATADVVVLFDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFLTENTVEER 499
Query: 603 VWDVVRSKL 611
+ + KL
Sbjct: 500 IVERAEMKL 508
>gi|339442159|ref|YP_004708164.1| hypothetical protein CXIVA_10950 [Clostridium sp. SY8519]
gi|338901560|dbj|BAK47062.1| hypothetical protein CXIVA_10950 [Clostridium sp. SY8519]
Length = 1255
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 225/509 (44%), Gaps = 64/509 (12%)
Query: 165 QIPAHIESKLLPFQRDG---VRFALQHGGRILLADEMGLGKTIQAIAVATCFRDV----- 216
++PA +++ + +Q G +R LQ G +LAD+MGLGKT+Q IAV R+
Sbjct: 750 EVPASLKAVMRDYQVTGYQWMRTLLQAGFGGILADDMGLGKTLQMIAVLQALREEQTSGT 809
Query: 217 -------------------------------WPVLILTPSSLRLHWAAMIQQWLNIPPSE 245
P L++ P+SL +W ++++ PS
Sbjct: 810 PGALEAEENRGTGDPAAAGGPEEAAEHRLPEGPALVICPASLVYNWEEELRRF---APSL 866
Query: 246 IVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADE 305
VV +S L + N P + SY+++ + + F I + DE
Sbjct: 867 SVVTVSGLKKERHRQIHAM------NAPSHADVYVTSYELLRRDIERYENCRFGIQVLDE 920
Query: 306 SHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGN 365
+ ++KN QA + A I ++AL +GTP +R EL+ + L P + +
Sbjct: 921 AQYIKNPQAAVSKAVKIIRSGHRFAL--TGTPIENRLSELWSIFDYLMPGFLYSYEVFRR 978
Query: 366 RYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQ 425
+ Y+ A ++L M A ++RRLK DVL +LP K + F + EK R
Sbjct: 979 EFELPAA--KYKDAEALQQLKQ-MVAPFVLRRLKTDVLKELPEKLEEVRFARMGEKQRRL 1035
Query: 426 IYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSA---------EAKIPAVL 476
A ++ + + ++ ++ L E I +I D A AK A
Sbjct: 1036 YDAQVAHMQQLLEEPSDTPGKDRIRIL--AELTKIRQICCDPALLVEDYRGDSAKREACR 1093
Query: 477 DYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD 536
D +++ ++AG + L+F+ ML + + K + C +I G TP R LV F E
Sbjct: 1094 DLVQSAVDAGHRILLFSQFTSMLALLEEDLKKAGIACFKIIGSTPKKERIRLVHAFNESA 1153
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN 596
+V ++S+KAGG GL LT A VI + W QA DRAHRIGQ V VY L+A
Sbjct: 1154 EVPVFLISLKAGGTGLNLTGADLVIHYDPWWNLAAQNQATDRAHRIGQTHRVTVYRLIAQ 1213
Query: 597 DTVDDIVWDVVRSKLENLGQVLDGHENSL 625
DT+++ + + SK + +L G +
Sbjct: 1214 DTIEEKIVKLQESKKDLADAILSGQSEGI 1242
>gi|325087704|gb|EGC41014.1| TBP associated factor [Ajellomyces capsulatus H88]
Length = 1756
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 148/543 (27%), Positives = 244/543 (44%), Gaps = 104/543 (19%)
Query: 165 QIPAHIESKLLPFQRDGV-------RFALQHGGRILLADEMGLGKTIQAIAVATCFRDV- 216
+IP I+++L +Q++GV R+ L HG +L D+MGLGKT+Q + + +
Sbjct: 1156 EIPVAIKAELRSYQQEGVNWLAFLNRYHL-HG---ILCDDMGLGKTLQTLCIVASDHHMR 1211
Query: 217 --------------WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFT 262
P LI+ P +L HW I+Q+ + + L+ +G
Sbjct: 1212 SEEFARTGAPEARRLPSLIICPPTLSGHWQQEIKQY-----APFLSCLAYVGAP------ 1260
Query: 263 IVSSNTKRNIPLDGL-FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATL 321
S +K L + I SYD+ ++ + N+ + DE H +KN +AK T A
Sbjct: 1261 --SERSKLRGSLGSVDIVITSYDICRNDNDVFVPLNWNYCVLDEGHLIKNPKAKITLAVK 1318
Query: 322 PIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASN 381
+ K+ + L+LSGTP + +EL+ + L P + +R+ K + +S+
Sbjct: 1319 RL--KSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAASQFSKSSS 1376
Query: 382 HEE------LHNLMKATV--MIRRLKKDVLAQLPVKRRQQVFLDVAE------------- 420
E+ + L K + ++RRLK++VL LP K Q + D+++
Sbjct: 1377 KEQEVGALAIEALHKQVLPFLLRRLKEEVLNDLPPKILQNYYCDLSDLQRKLFEDFTKKE 1436
Query: 421 -KDMRQIYA---------LFRELEVVKGKIKACKS-----EEEVQSLKFTEKNLI--NKI 463
KD+ +I +F+ L+ ++ + C S +E + +K+L N
Sbjct: 1437 QKDITKIVGSTDKEAKQHIFQALQYMR---RLCNSPALVVKESHKQYDEIQKSLAAKNSH 1493
Query: 464 YTDSAEA-KIPAVLDYL-----------ETVIEAGCKF------LIFAHHQPMLDAIHQL 505
D A A K+ A+ D L E ++ G + L+F + MLD +
Sbjct: 1494 IRDVAHAPKLIALRDLLVDCGIGVDPSTEGELDTGASYVSPHRALVFCQMKEMLDIVQND 1553
Query: 506 FLKK---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIF 562
LKK V +R+DG RQ++V +F +L+ GG+GL LT A TVIF
Sbjct: 1554 VLKKLLPSVQFLRLDGSVEATKRQSIVNQFNTDPSYDVLLLTTSVGGLGLNLTGADTVIF 1613
Query: 563 AELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
E W P IQA DRAHRIGQ VNVY L+ T+++ + ++ R K++ V++
Sbjct: 1614 VEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVNQQN 1673
Query: 623 NSL 625
L
Sbjct: 1674 AGL 1676
>gi|322787688|gb|EFZ13700.1| hypothetical protein SINV_08345 [Solenopsis invicta]
Length = 1008
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 250/512 (48%), Gaps = 57/512 (11%)
Query: 149 AIASASAAPDLREKYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTI 204
A ++AS AP R ++ P +I+S +L +Q G+ + + +HG +LADEMGLGKT+
Sbjct: 107 AESNASVAPTTR--FESSPHYIKSGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTL 164
Query: 205 QAIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSG 260
Q I++ FR++ P +++ P S +W ++W PS V L G +
Sbjct: 165 QTISLLGYMKHFRNIPGPHIVIVPKSTLANWMNEFKKWC---PSLRAVCLI---GDAETR 218
Query: 261 FTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
T + R++ + G +++ SY++V+K +++ N++ ++ DE+H +KN ++K +
Sbjct: 219 NTFI-----RDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSE 273
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
K LLL+GTP + EL+ L L PDV+ + ++ + + G
Sbjct: 274 ILREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDSWFNTNSFLG---D 328
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVV 436
S E LH +++ ++RRLK +V L K+ +V++ ++ K R+ Y L +++++V
Sbjct: 329 NSLVERLHAVLRP-FLLRRLKSEVEKGLKPKKEIKVYIGLS-KMQREWYTKVLMKDIDIV 386
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLE 480
G K K +Q++ + N Y D AE P D L
Sbjct: 387 NGAGKIEKMR--LQNILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLP 444
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
+ + + LIF+ MLD + + R+DG T RQ + E+ K
Sbjct: 445 KLQQQESRVLIFSQMTRMLDILEDYCHWRCFQYCRLDGNTAHEDRQRQINEYNAPGSEKF 504
Query: 541 A-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ V V+ + +TV
Sbjct: 505 IFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTV 564
Query: 600 DDIVWDV--VRSKLENL----GQVLDGHENSL 625
++ + + V+ +L+ L G+++D + +L
Sbjct: 565 EEKIVERAEVKLRLDKLVIQQGRLVDAKQQAL 596
>gi|195380475|ref|XP_002048996.1| GJ21345 [Drosophila virilis]
gi|194143793|gb|EDW60189.1| GJ21345 [Drosophila virilis]
Length = 714
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 140/496 (28%), Positives = 236/496 (47%), Gaps = 59/496 (11%)
Query: 163 YDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDV-- 216
++ PA+IE ++ +Q G+ + + ++G +LADEMGLGKT+Q +++ +
Sbjct: 125 FNASPAYIEGGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTVSLIGYLKHFKN 184
Query: 217 --WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P S +W + W P V ++ L +R F R++ +
Sbjct: 185 QSGPHLVVVPKSTLQNWMNEFKHW--CPSLNAVCLIGDL--KSRKTFI-------RDVLV 233
Query: 275 DGLFN--IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA-- 330
G ++ I SY++ L+ ++ L S +++ ++ DE+H +KN + K II++ A
Sbjct: 234 SGNWDVCITSYEMCLREKSALKSFHWQYLVMDEAHRIKNEKTK----LAEIIREFNSANR 289
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
LLL+GTP + EL+ L L PDV+ + ++ + G S LH ++K
Sbjct: 290 LLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNSCLGDETLVS---RLHAVLK 346
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
++RRLK +V L K+ ++F+ ++ K R+ Y L ++++VV G K K
Sbjct: 347 P-FLLRRLKSEVEKSLKPKKETKIFVGMS-KLQREWYTKLLLKDIDVVNGAGKIEKMR-- 402
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIF 492
+Q++ + N Y D AE P D L + E G + LIF
Sbjct: 403 LQNILVHLRKCTNHPYLFDGAEPGPPYTTDEHLVNDSGKMIILDKLLPKLQEQGSRVLIF 462
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQ-EKDDVKAAVLSMKAGGVG 551
+ MLD + + + R+DG T R ++ E+ EK +LS +AGG+G
Sbjct: 463 SQMTRMLDILEDYCAWRNYNYCRLDGKTEHEDRNQMIQEYNMEKSTKFIFLLSTRAGGLG 522
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ L A VI + W P +QA DRAHRIGQ V V+ L+ +TVD+ + + KL
Sbjct: 523 INLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLVTENTVDEKIVERAEVKL 582
Query: 612 E------NLGQVLDGH 621
G+VL+ H
Sbjct: 583 RLDRMVIQAGRVLENH 598
>gi|308809077|ref|XP_003081848.1| putative SNF2 domain-containing protein (ISS) [Ostreococcus tauri]
gi|116060315|emb|CAL55651.1| putative SNF2 domain-containing protein (ISS) [Ostreococcus tauri]
Length = 1782
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 150/508 (29%), Positives = 237/508 (46%), Gaps = 66/508 (12%)
Query: 165 QIPAHIESKLLPFQRDGV-------RFALQHGGRILLADEMGLGKTIQAIAV--ATCF-- 213
++P L P+Q+DGV RF L HG LAD+MGLGKT+Q+ + AT
Sbjct: 1219 KLPFKCARTLRPYQQDGVNWLAFLRRFKL-HGA---LADDMGLGKTLQSTCILAATTVER 1274
Query: 214 -RD---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTK 269
RD P L++ P++L HWA I L + P + + Q GS + K
Sbjct: 1275 KRDGLKKLPHLVICPTTLVSHWAYEIS--LYVEPDVLRPLEYQ--GSPPERLALQKDFGK 1330
Query: 270 RNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQY 329
+I I+SY+ + N L S ++ + DE H ++N +++ T A + +A++
Sbjct: 1331 YDI------VIMSYESLRADFNTLDSFDWCYCVLDEGHAIRNPKSRVTQAVKKV--RAEH 1382
Query: 330 ALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC----------KGGVFGIYQGA 379
LLLSGTP + +EL+ + L P E+ + Y KGG QGA
Sbjct: 1383 RLLLSGTPIQNDVVELWSLFDFLMPGFLGTEREFKSTYGIAAARSAAAKKGGGL-TEQGA 1441
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGK 439
LH + VM RR K VL LP K Q V++D+ R++Y F +
Sbjct: 1442 LATGALHKQVMPFVM-RRTKDQVLKDLPPKIIQDVYVDLTAA-QRKMYDSFESSDAKSAA 1499
Query: 440 IKACKSEEEV--------QSLKFTEKNLIN-KIYTDSAEAKIPAVL-----DYLETV--- 482
+ A + Q+L++ K + K+ +D+ K + D E
Sbjct: 1500 VSAVEGGGNAEGAAAHVFQTLQYLRKLCSHPKLVSDTTSKKFDPDMRSPKFDAGEDAKPN 1559
Query: 483 --IEAGCKFLIFAHHQPMLDAIH-QLFLK--KKVHCIRIDGGTPPASRQALVTEFQEKDD 537
AG + L+F+ + +LD + +LF + V +R+DG P+ R +V +F
Sbjct: 1560 PAAGAGHRVLVFSQLKSLLDLVETELFTTQMRDVSWLRLDGSVAPSQRFDVVRKFNADPS 1619
Query: 538 VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAND 597
+ +L+ GG+GL LT+A TV+F E W P +QA DRAHR+GQ +VNVY +L
Sbjct: 1620 IDVLLLTTHVGGLGLNLTSADTVVFLEHDWNPQKDLQAMDRAHRLGQRKTVNVYRILTRG 1679
Query: 598 TVDDIVWDVVRSKLENLGQVLDGHENSL 625
T+++ + + R KL+ V++ S+
Sbjct: 1680 TLEEKIMSLQRFKLDVANAVVNADNASM 1707
>gi|169343905|ref|ZP_02864901.1| putative helicase [Clostridium perfringens C str. JGS1495]
gi|169298025|gb|EDS80116.1| putative helicase [Clostridium perfringens C str. JGS1495]
Length = 1065
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 233/490 (47%), Gaps = 64/490 (13%)
Query: 166 IPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
+P + ++L P+Q++G ++ L GG +LAD+MGLGKT+Q IA + ++
Sbjct: 584 VPKALNAELRPYQKEGFKWINEITDLGFGG--VLADDMGLGKTLQIIAFLLSQKKSKSIV 641
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRS----------GFTIVSSNTKR 270
++ P+S+ +W +++ I V L S R G I N K
Sbjct: 642 VV-PTSVIYNWMDEFEKF----APRIRVGLVHGSKSKRDKVLRDFKRGLGIKIEEENLKE 696
Query: 271 NIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPI 323
+ YDV+L L + +F I DE+ +KN A+ T + I
Sbjct: 697 K-------SYEKYDVLLTTYGTLKNDEKAYENLSFDYCIIDEAQNIKNPTAQATLSVKNI 749
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE 383
K++ + L+GTP + +EL+ + + P + R+ SN
Sbjct: 750 --KSRCNIALTGTPIENNLMELWSIFDFVMPGYLFTKERFRERFI--------LDESNLS 799
Query: 384 ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC 443
EL +L+ ++RRLK+DVL++LP K ++ +++ K +Q+Y+ + ++ +K ++
Sbjct: 800 ELKSLI-TPFILRRLKEDVLSELPEKLEKKYLVEMKGK-QKQLYSFY--VKAIKNQLNEN 855
Query: 444 KSEEEVQSLKFTEKNLINKI-------------YTDSAEAKIPAVLDYLETVIEAGCKFL 490
KS E+ K + K+ YT +K+ V + ++ E+G K L
Sbjct: 856 KSSEKCGRDKINLFAYLTKLREICLDPSLVVPDYT-GGSSKLTVVKEIVKDASESGKKIL 914
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGV 550
+F+ +L I + F K+ + + +DGGT R V F E ++K ++S+KAGGV
Sbjct: 915 LFSQFTSVLKKIEEDFKKEDISYLYLDGGTSAKDRVERVKRFNEDSNIKVFLISLKAGGV 974
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
GL LT+AS VI + W P QA DRAHR GQ + V V L+A DT+++ + + K
Sbjct: 975 GLNLTSASVVIHFDPWWNPAVEEQATDRAHRFGQENKVEVIKLVAKDTIEEKIVLMQEDK 1034
Query: 611 LENLGQVLDG 620
E + ++DG
Sbjct: 1035 RELIQSLMDG 1044
>gi|218960404|ref|YP_001740179.1| hypothetical protein CLOAM0057 [Candidatus Cloacamonas
acidaminovorans]
gi|167729061|emb|CAO79972.1| hypothetical protein CLOAM0057 [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 1065
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 138/485 (28%), Positives = 235/485 (48%), Gaps = 45/485 (9%)
Query: 164 DQIPAHIESKLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA--VATCFRDVWP 218
+ +P ++++ L +Q+ GV + + +LADEMGLGKTIQA++ ++T V
Sbjct: 599 ETLPLYLQTVLRGYQKAGVAWIKMLAHYHLNGILADEMGLGKTIQALSAILSTTLGQV-- 656
Query: 219 VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
L++ P +L +WAA I ++ P IV G+ + I+S+ P LF
Sbjct: 657 SLVICPKTLLYNWAAEIDKFHTNIPFAIV------DGNKTTRMEILSN------PNVQLF 704
Query: 279 NIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPA 338
I+SY +VL L + F+ ++ DE+ +KN A+RT+A + K+++ L L+GTP
Sbjct: 705 -IMSYSMVLGDVAYLKNMEFEWIVLDEAQNIKNVSAQRTSAIKKL--KSKHRLALTGTPI 761
Query: 339 LSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRL 398
+ EL+ + L P ++++ Y +G + M A M+RR+
Sbjct: 762 ENNLTELWSIFDFLNPGYLGTLNKFKQNYLPA------EGEITARLSLSRMVAPFMLRRI 815
Query: 399 KKDVLAQLPVKRRQQVFLDV---AEKDMRQIYALFRELEVVKGK---------IKACKSE 446
KKDVL +LP K+ Q + + EK QI + + + +GK K
Sbjct: 816 KKDVLLELPDKQEQISWCKLNTLQEKLYLQILDMVHKKLLPEGKEMPSYIHILAALTKLR 875
Query: 447 EEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLF 506
+ +++ ++ A +K+ +L+ + AG K LIF+ ML I ++
Sbjct: 876 QVCNHPHLANGDILPEL---EASSKLEQLLELVTEATNAGHKVLIFSQFVQMLSIIRKVL 932
Query: 507 LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELS 566
+ +DG T R + F+ ++K ++S+KAGG GL LTAA TVI +
Sbjct: 933 EANSLPYCYLDGQT--KDRVTPIKSFETNPEIKLFLISLKAGGTGLNLTAADTVILYDPW 990
Query: 567 WTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
W P QA DR HRIGQ V V+ L+ TV++ + + ++K E V++G +N L+
Sbjct: 991 WNPMVENQAIDRTHRIGQTHKVQVFRLITKGTVEEKILQLQQNKRELFETVIEGGQNVLK 1050
Query: 627 VSSSQ 631
+ +
Sbjct: 1051 AMTKE 1055
>gi|118089662|ref|XP_420329.2| PREDICTED: probable global transcription activator SNF2L1 [Gallus
gallus]
Length = 1031
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 245/500 (49%), Gaps = 57/500 (11%)
Query: 162 KYDQIPAHIESKLL-PFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATC---FR 214
++++ P++++ L +Q G+ + + ++G +LADEMGLGKT+Q IA+ +R
Sbjct: 143 RFEESPSYVKGGTLRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYR 202
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-RSGFTIVSSNTKRNI 272
++ P ++L P S +W ++W+ PS V L +G + R+ F R++
Sbjct: 203 NIPGPHMVLVPKSTLHNWMNEFKRWV---PSLRAVCL--IGDKDARAAFI-------RDV 250
Query: 273 PLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
+ G +++ SY++V+K +++ N++ ++ DE+H +KN ++K + K
Sbjct: 251 MMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF--KTTNR 308
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
LLL+GTP + EL+ L L PDV+ + ++ + + G + E LH ++K
Sbjct: 309 LLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV---ERLHAVLK 365
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
++RR+K +V LP K+ +++L ++ K R+ Y L ++++++ K K
Sbjct: 366 P-FLLRRIKAEVEKSLPPKKEVKIYLGLS-KMQREWYTRILMKDIDILNSAGKMDKMR-- 421
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIF 492
+ ++ + N Y D AE P D L + E G + L+F
Sbjct: 422 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLITNSGKMLVLDKLLAKLREQGSRVLLF 481
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVG 551
+ +LD + + + R+DG TP R+ + F + K +LS +AGG+G
Sbjct: 482 SQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLG 541
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ L A VI + W P +QA DRAHRIGQ V V+ L+ ++TV++ + + KL
Sbjct: 542 INLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 601
Query: 612 E------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 602 RLDSIVIQQGRLIDQQSNKL 621
>gi|288927483|ref|ZP_06421330.1| helicase, Snf2 family [Prevotella sp. oral taxon 317 str. F0108]
gi|288330317|gb|EFC68901.1| helicase, Snf2 family [Prevotella sp. oral taxon 317 str. F0108]
Length = 859
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 235/489 (48%), Gaps = 56/489 (11%)
Query: 160 REKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRD---V 216
+E +D + + ++L P+Q +G++FAL+ G+ ++ADEMGLGKTIQAIA A R V
Sbjct: 150 QEDFDSL---LHTRLYPYQVEGIKFALK-AGKSIIADEMGLGKTIQAIATAQMLRRKALV 205
Query: 217 WPVLILTPSSLRLHWAAMIQQW----LNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNI 272
VLI+ P+SL+ W I+++ +++ +++ Q G
Sbjct: 206 GNVLIVCPTSLKYQWKREIERFTGETVHVIEGDLLARCKQYEGQE--------------- 250
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
P + IISY+ + +L S +++ DE LKN A + AQYA++
Sbjct: 251 P----YRIISYNALSNDLKLLKSIEVDMLVIDEVQRLKNWNTHIAKAARKV--NAQYAVV 304
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
LSGTP +R EL+ E + +++ +RY G G N EL +K
Sbjct: 305 LSGTPLENRLEELYSVAELVDQFALSPYYKFKDRYIMLDERGATAGYRNLNELGERIK-R 363
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL 452
+IRR K+DV Q+P ++ + +F+ + ++ M Q + V+ K + + L
Sbjct: 364 FLIRRRKRDVNLQMPERQDKLLFVPMTKQQMVQHDEARWHVSVL------LKKWQNMHFL 417
Query: 453 KFTEKNLINK------IYTDSA---------EAKIPAVLDYLETVIEAGC-KFLIFAHHQ 496
T++N + K + DS + K+ V++ + VIE+G K ++F+ +
Sbjct: 418 SETDRNKLMKYLSQMRMLCDSTYILDQKTRFDTKVTEVINIVRNVIESGDEKLVVFSQWE 477
Query: 497 PMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTA 556
M + + K+ + + GG P R+ LV F ++ + LS AG GL L A
Sbjct: 478 RMTRLVAKELEKEGIGFEYLHGGIPSIRRKDLVNNFMDEPHCRV-FLSTDAGSTGLNLQA 536
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
AS V+ +L W P L Q R +R+GQ ++ V L++ T ++ + D ++ K
Sbjct: 537 ASVVVNVDLPWNPAVLEQRIARVYRLGQKRNIQVINLVSAGTFEEDMLDKLKFKSSLFEG 596
Query: 617 VLDGHENSL 625
VLDG E+++
Sbjct: 597 VLDGGEDTI 605
>gi|67527878|ref|XP_661791.1| hypothetical protein AN4187.2 [Aspergillus nidulans FGSC A4]
gi|40740096|gb|EAA59286.1| hypothetical protein AN4187.2 [Aspergillus nidulans FGSC A4]
gi|259481212|tpe|CBF74527.1| TPA: TBP associated factor (Mot1), putative (AFU_orthologue;
AFUA_1G05830) [Aspergillus nidulans FGSC A4]
Length = 1904
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 151/547 (27%), Positives = 239/547 (43%), Gaps = 114/547 (20%)
Query: 165 QIPAHIESKLLPFQRDGV-------RFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW 217
++P I+++L P+Q++GV R+ L HG +L D+MGLGKT+Q I + +
Sbjct: 1309 KLPVAIKAELRPYQQEGVNWLAFLNRYNL-HG---ILCDDMGLGKTLQTICIVASDHHMR 1364
Query: 218 ---------------PVLILTPSSLRLHWAAMIQQW---LNI-----PPSEIVVVLSQLG 254
P LI+ P SL HW ++Q+ LN PP+E S+L
Sbjct: 1365 AEDFAKTQRPESRKVPSLIICPPSLSGHWQQEVKQYAPFLNCVAYVGPPAE----RSKLQ 1420
Query: 255 GSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQA 314
GS +V+S YD+ ++L ++ + DE H +KN +A
Sbjct: 1421 GSLADADIVVTS----------------YDICRNDNDVLRPISWNYCVLDEGHLIKNPKA 1464
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
K T A I + + L+LSGTP + +EL+ + L P + +R+ K
Sbjct: 1465 KVTMAVKRI--NSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIATS 1522
Query: 375 IYQGASNHEE-----LHNLMKATV--MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY 427
+ +S +E + L K + ++RRLK++VL LP K Q + D +E ++++
Sbjct: 1523 RFSKSSKEQEAGALAIEALHKQVLPFLLRRLKEEVLNDLPPKIIQNYYCDPSEL-QKKLF 1581
Query: 428 ALF-----RELEVVKGKIKACKSEEEVQSLKFTEKNLIN----------KIYTD------ 466
F + L+ G + E Q+L++ + L N K Y +
Sbjct: 1582 EDFTKKEQKALQEKMGSSEKADKEHIFQALQYMRR-LCNSPALVVKEGHKQYNEVQQYLQ 1640
Query: 467 ---------SAEAKIPAVLDYL----------ETVIEAGCKF------LIFAHHQPMLDA 501
S K+ A+ D L E + AG + L+F + MLD
Sbjct: 1641 EKKSYLRDVSHAPKLSALKDLLLDCGIGVEPTEGNLGAGASYVSPHRALVFCQMKEMLDI 1700
Query: 502 IHQLFLKK---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAS 558
+ L+K V +R+DG RQ +V F +L+ GG+GL LT A
Sbjct: 1701 VQSEVLQKLLPSVQFLRLDGAVEATRRQDIVNRFNSDPSYDVLLLTTSVGGLGLNLTGAD 1760
Query: 559 TVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
TVIF E W P IQA DRAHRIGQ VNVY L+ T+++ + ++ R K++ V+
Sbjct: 1761 TVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVV 1820
Query: 619 DGHENSL 625
+ L
Sbjct: 1821 NQQNAGL 1827
>gi|14028669|gb|AAK52454.1|AF325921_1 DNA-dependent ATPase SNF2H [Mus musculus]
Length = 1051
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 240/491 (48%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 154 LTERSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 213
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 214 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 269
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++ +
Sbjct: 270 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSNLSEI 322
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 323 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNSLGDQKLV 380
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 381 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 435
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 436 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 493
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 494 LKEQSSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 553
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 554 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 613
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 614 ERIVERAEMKL 624
>gi|422873728|ref|ZP_16920213.1| putative helicase [Clostridium perfringens F262]
gi|380305546|gb|EIA17824.1| putative helicase [Clostridium perfringens F262]
Length = 1067
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 236/490 (48%), Gaps = 64/490 (13%)
Query: 166 IPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
+P + ++L P+Q++G ++ L GG +LAD+MGLGKT+Q IA + ++
Sbjct: 586 VPKALNAELRPYQKEGFKWINEITYLGFGG--VLADDMGLGKTLQIIAFLLSQKKSKSIV 643
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRS----------GFTIVSSNTKR 270
++ P+S+ +W +++ PS I V L S R G + N K
Sbjct: 644 VV-PTSVIYNWMDEFEKF---APS-IRVGLVHGSKSKRDKVLRDFKRGLGIKVEEENLKE 698
Query: 271 NIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPI 323
+ YDV+L L + +F I DE+ +KN A+ T + I
Sbjct: 699 K-------SYEKYDVLLTTYGTLKNDEKAYENLSFDYCIIDEAQNIKNPVAQATLSVKNI 751
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE 383
K++ + L+GTP + +EL+ + + P + R+ SN
Sbjct: 752 --KSRCNIALTGTPIENNLMELWSIFDFVMPGYLFTKERFRERFI--------LDESNLS 801
Query: 384 ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC 443
EL +L+ ++RRLK+DVL++LP K ++ +++ K +Q+Y+ + ++ +K ++
Sbjct: 802 ELKSLI-TPFILRRLKEDVLSELPEKLEKKYLVEMKGK-QKQLYSFY--VKAIKNQLNEN 857
Query: 444 KSEEEVQSLKFTEKNLINKI-------------YTDSAEAKIPAVLDYLETVIEAGCKFL 490
KS E+ K + K+ YT +K+ V + ++ E+G K L
Sbjct: 858 KSSEKSGRDKINLFAYLTKLREICLDPSLVVPDYT-GGSSKLTVVKEIVKDASESGKKIL 916
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGV 550
+F+ +L I + F K+ + + +DGGT R V +F E ++K ++S+KAGGV
Sbjct: 917 LFSQFTSVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGV 976
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
GL LT+AS VI + W P QA DRAHR GQ + V V L+A DT+++ + + K
Sbjct: 977 GLNLTSASVVIHFDPWWNPAVEDQATDRAHRFGQENKVEVIKLVAKDTIEEKIVLMQEDK 1036
Query: 611 LENLGQVLDG 620
E + ++DG
Sbjct: 1037 RELIQSLMDG 1046
>gi|307191525|gb|EFN75028.1| Chromatin-remodeling complex ATPase chain Iswi [Camponotus
floridanus]
Length = 1010
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 250/512 (48%), Gaps = 57/512 (11%)
Query: 149 AIASASAAPDLREKYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTI 204
A ++AS AP R ++ P +I+S +L +Q G+ + + +HG +LADEMGLGKT+
Sbjct: 108 AESNASVAPTTR--FESSPHYIKSGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTL 165
Query: 205 QAIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSG 260
Q I++ FR++ P +++ P S +W ++W PS V L G +
Sbjct: 166 QTISLLGYMKHFRNIPGPHIVIVPKSTLANWMNEFKKWC---PSLRAVCLI---GDAETR 219
Query: 261 FTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
T + R++ + G +++ SY++V+K +++ N++ ++ DE+H +KN ++K +
Sbjct: 220 NTFI-----RDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSE 274
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
K LLL+GTP + EL+ L L PDV+ + ++ + + G
Sbjct: 275 ILREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDSWFNTNSFLG---D 329
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVV 436
S E LH +++ ++RRLK +V L K+ +V++ ++ K R+ Y L +++++V
Sbjct: 330 NSLVERLHAVLRP-FLLRRLKSEVEKGLKPKKEIKVYIGLS-KMQREWYTKVLMKDIDIV 387
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLE 480
G K K +Q++ + N Y D AE P D L
Sbjct: 388 NGAGKIEKMR--LQNILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLP 445
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
+ + + LIF+ MLD + + R+DG T RQ + E+ K
Sbjct: 446 KLQQQESRVLIFSQMTRMLDILEDYCHWRCFQYCRLDGNTAHEDRQRQINEYNAPGSEKF 505
Query: 541 A-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ V V+ + +TV
Sbjct: 506 IFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTV 565
Query: 600 DDIVWDV--VRSKLENL----GQVLDGHENSL 625
++ + + V+ +L+ L G+++D + +L
Sbjct: 566 EEKIVERAEVKLRLDKLVIQQGRLVDAKQTAL 597
>gi|168212253|ref|ZP_02637878.1| putative helicase [Clostridium perfringens CPE str. F4969]
gi|170716039|gb|EDT28221.1| putative helicase [Clostridium perfringens CPE str. F4969]
Length = 1067
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 236/490 (48%), Gaps = 64/490 (13%)
Query: 166 IPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
+P + ++L P+Q++G ++ L GG +LAD+MGLGKT+Q IA + ++
Sbjct: 586 VPKALNAELRPYQKEGFKWINEITDLGFGG--VLADDMGLGKTLQIIAFLLSQKKSKSIV 643
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRS----------GFTIVSSNTKR 270
++ P+S+ +W +++ PS I + L S R G I N K
Sbjct: 644 VV-PTSVIYNWMDEFEKF---APS-IRIGLVHGSKSKRDKVLRDFKRGLGIKIEEENLKE 698
Query: 271 NIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPI 323
+ YDV+L L + +F I DE+ +KN A+ T + I
Sbjct: 699 K-------SYEKYDVLLTTYGTLKNDKKAYENLSFDYCIIDEAQNIKNPVAQATLSVKNI 751
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE 383
K++ + L+GTP + +EL+ + + P + R+ SN
Sbjct: 752 --KSRCNIALTGTPIENNLMELWSIFDFVMPGYLFTKERFRERFI--------LDESNLS 801
Query: 384 ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC 443
EL +L+ ++RRLK+DVL++LP K ++ +++ K +Q+Y+ + ++ +K ++
Sbjct: 802 ELKSLI-TPFILRRLKEDVLSELPEKLEKKYLVEMKGK-QKQLYSFY--VKAIKNQLNEN 857
Query: 444 KSEEEVQSLKFTEKNLINKI-------------YTDSAEAKIPAVLDYLETVIEAGCKFL 490
KS E+ K + K+ YT +K+ V + ++ E+G K L
Sbjct: 858 KSSEKSGRDKINLFAYLTKLREICLDPSLVVPDYT-GGSSKLTVVKEIVKDASESGKKIL 916
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGV 550
+F+ +L I + F K+ + + +DGGT R V +F E ++K ++S+KAGGV
Sbjct: 917 LFSQFTSVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGV 976
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
GL LT+AS VI + W P QA DRAHR GQ + V V L+A DT+++ + + K
Sbjct: 977 GLNLTSASVVIHFDPWWNPAVEDQATDRAHRFGQENKVEVIKLVAKDTIEEKIVLMQEDK 1036
Query: 611 LENLGQVLDG 620
E + ++DG
Sbjct: 1037 RELIQSLMDG 1046
>gi|332021363|gb|EGI61737.1| Chromatin-remodeling complex ATPase chain Iswi [Acromyrmex
echinatior]
Length = 1007
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 249/512 (48%), Gaps = 57/512 (11%)
Query: 149 AIASASAAPDLREKYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTI 204
A ++AS AP R ++ P +I+S +L +Q G+ + + +HG +LADEMGLGKT+
Sbjct: 106 AESNASVAPTTR--FESSPHYIKSGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTL 163
Query: 205 QAIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSG 260
Q I++ FR++ P +++ P S +W ++W P V ++ R+
Sbjct: 164 QTISLLGYMKHFRNIPGPHIVIVPKSTLANWMNEFKKW--CPTLRAVCLIGD--AETRNT 219
Query: 261 FTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
F R++ + G +++ SY++V+K +++ N++ ++ DE+H +KN ++K +
Sbjct: 220 FI-------RDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSE 272
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
K LLL+GTP + EL+ L L PDV+ + ++ + + G
Sbjct: 273 ILREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDSWFNTNSFLG---D 327
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVV 436
S E LH +++ ++RRLK +V L K+ +V++ ++ K R+ Y L +++++V
Sbjct: 328 NSLVERLHAVLRP-FLLRRLKSEVEKGLKPKKEIKVYIGLS-KMQREWYTKVLMKDIDIV 385
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLE 480
G K K +Q++ + N Y D AE P D L
Sbjct: 386 NGAGKIEKMR--LQNILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLP 443
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
+ + + LIF+ MLD + + R+DG T RQ + E+ K
Sbjct: 444 KLQQQESRVLIFSQMTRMLDILEDYCHWRCFQYCRLDGNTAHEDRQRQINEYNAPGSEKF 503
Query: 541 A-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ V V+ + +TV
Sbjct: 504 IFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTV 563
Query: 600 DDIVWDV--VRSKLENL----GQVLDGHENSL 625
++ + + V+ +L+ L G+++D + +L
Sbjct: 564 EEKIVERAEVKLRLDKLVIQQGRLVDAKQTAL 595
>gi|327351256|gb|EGE80113.1| transcriptional accessory protein [Ajellomyces dermatitidis ATCC
18188]
Length = 1913
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 148/550 (26%), Positives = 240/550 (43%), Gaps = 118/550 (21%)
Query: 165 QIPAHIESKLLPFQRDGV-------RFALQHGGRILLADEMGLGKTIQAIAVATCFRDV- 216
+IP I+++L +Q++GV R+ L HG +L D+MGLGKT+Q + + +
Sbjct: 1313 EIPVAIKAELRSYQQEGVNWLAFLNRYHL-HG---ILCDDMGLGKTLQTLCIVASDHHMR 1368
Query: 217 --------------WPVLILTPSSLRLHWAAMIQQWLNI--------PPSEIVVVLSQLG 254
P LI+ P +L HW I+Q+ PP+E + + LG
Sbjct: 1369 KEEFARSGAPEARRLPSLIICPPTLSGHWQQEIKQYAPFLSCLAYVGPPAERSRLQNSLG 1428
Query: 255 GSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQA 314
+ I SYD+ ++ N+ + DE H +KN +A
Sbjct: 1429 SVD--------------------VVITSYDICRNDNDVFAPLNWNYCVLDEGHLIKNPKA 1468
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
K T A + K+ + L+LSGTP + +EL+ + L P + +R+ K
Sbjct: 1469 KITLAVKRL--KSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAAS 1526
Query: 375 IYQGASNHEE------LHNLMKATV--MIRRLKKDVLAQLPVKRRQQVFLDVAE------ 420
+ +S+ E+ + L K + ++RRLK++VL LP K Q + D+++
Sbjct: 1527 RFSKSSSKEQEAGALAIEALHKQVLPFLLRRLKEEVLNDLPPKILQNYYCDLSDLQRQLF 1586
Query: 421 --------KDMRQIYA---------LFRELEVVKGKIKACKS-----EEEVQSLKFTEKN 458
KD+ +I +F+ L+ ++ + C S +E + +K+
Sbjct: 1587 EDFTKKEQKDIAKIVGSTDKEAKQHIFQALQYMR---RLCNSPALVVKENHKRYDEIQKS 1643
Query: 459 LI--NKIYTDSAEA-KIPAVLDYL-----------ETVIEAGCKF------LIFAHHQPM 498
L N D A A K+ A+ D L E ++ G + L+F + M
Sbjct: 1644 LAGKNSHIRDVAHAPKLTALRDLLVDCGIGVDPSTEGELDTGASYVSPHRALVFCQMKEM 1703
Query: 499 LDAIHQLFLKK---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLT 555
LD + LKK V +R+DG RQ +V +F +L+ GG+GL LT
Sbjct: 1704 LDIVQNDVLKKLLPSVQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT 1763
Query: 556 AASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLG 615
A TVIF E W P IQA DRAHRIGQ VNVY L+ T+++ + ++ R K++
Sbjct: 1764 GADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAS 1823
Query: 616 QVLDGHENSL 625
V++ L
Sbjct: 1824 TVVNQQNAGL 1833
>gi|326924536|ref|XP_003208483.1| PREDICTED: probable global transcription activator SNF2L1-like
[Meleagris gallopavo]
Length = 1043
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 245/500 (49%), Gaps = 57/500 (11%)
Query: 162 KYDQIPAHIESKLL-PFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATC---FR 214
++++ P++++ L +Q G+ + + ++G +LADEMGLGKT+Q IA+ +R
Sbjct: 155 RFEESPSYVKGGTLRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYR 214
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-RSGFTIVSSNTKRNI 272
++ P ++L P S +W ++W+ PS V L +G + R+ F R++
Sbjct: 215 NIPGPHMVLVPKSTLHNWMNEFKRWV---PSLRAVCL--IGDKDARAAFI-------RDV 262
Query: 273 PLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
+ G +++ SY++V+K +++ N++ ++ DE+H +KN ++K + K
Sbjct: 263 MMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF--KTTNR 320
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
LLL+GTP + EL+ L L PDV+ + ++ + + G + E LH ++K
Sbjct: 321 LLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV---ERLHAVLK 377
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
++RR+K +V LP K+ +++L ++ K R+ Y L ++++++ K K
Sbjct: 378 P-FLLRRIKAEVEKSLPPKKEVKIYLGLS-KMQREWYTRILMKDIDILNSAGKMDKMR-- 433
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIF 492
+ ++ + N Y D AE P D L + E G + L+F
Sbjct: 434 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLITNSGKMLVLDKLLAKLREQGSRVLLF 493
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVG 551
+ +LD + + + R+DG TP R+ + F + K +LS +AGG+G
Sbjct: 494 SQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLG 553
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ L A VI + W P +QA DRAHRIGQ V V+ L+ ++TV++ + + KL
Sbjct: 554 INLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 613
Query: 612 E------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 614 RLDSIVIQQGRLIDQQSNKL 633
>gi|195058262|ref|XP_001995418.1| GH23147 [Drosophila grimshawi]
gi|193899624|gb|EDV98490.1| GH23147 [Drosophila grimshawi]
Length = 1025
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 236/488 (48%), Gaps = 49/488 (10%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++D PA+I+ ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +
Sbjct: 115 RFDASPAYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFK 174
Query: 215 -DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P +++ P S +W ++W PS V L +G + I R++
Sbjct: 175 NQAGPHIVIVPKSTLQNWVNEFKKWC---PSLHAVCL--IGDQDTRNTFI------RDVL 223
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
L G +++ SY++ ++ +++ N++ ++ DE+H +KN ++K + L K A L
Sbjct: 224 LPGEWDVCVTSYEMCIREKSVFKKFNWRYMVIDEAHRIKNEKSK-LSEILREFKTAN-RL 281
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PDV+ + ++ + G + LH ++K
Sbjct: 282 LITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDALVT---RLHAVLKP 338
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK +V +L K+ ++F+ ++ K R Y L +++++V G K K +
Sbjct: 339 -FLLRRLKAEVEKRLKPKKEMKIFVGLS-KMQRDWYTKVLLKDIDIVNGAGKVEKMR--L 394
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLIFA 493
Q++ + N Y D AE P A+LD L + E G + LIF+
Sbjct: 395 QNILMQLRKCTNHPYLFDGAEPGPPYTTDSHLVYNSGKMAILDKLLPKLQEQGSRVLIFS 454
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + + + R+DG TP R + EF + K +LS +AGG+G+
Sbjct: 455 QMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSTKFLFMLSTRAGGLGI 514
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA DRAHRIGQ V V+ L+ TV++ + + KL
Sbjct: 515 NLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLR 574
Query: 613 NLGQVLDG 620
V+ G
Sbjct: 575 LDKMVIQG 582
>gi|56118945|ref|NP_001007993.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Xenopus (Silurana)
tropicalis]
gi|51704071|gb|AAH80870.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Xenopus (Silurana)
tropicalis]
Length = 1049
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 249/512 (48%), Gaps = 57/512 (11%)
Query: 150 IASASAAPDLREKYDQIPAHIESKLL-PFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S ++ +++ P++++ L +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 151 LTESSKTTNVCTRFEDSPSYVKGGTLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 210
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-RSG 260
I++ +R + P ++L P S +W A ++W+ PS + L +G + R+
Sbjct: 211 TISLLGYMKHYRSIPGPHMVLVPKSTLHNWMAEFKRWV---PSLCAICL--IGDKDHRAA 265
Query: 261 FTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
F R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 266 FV-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSE 318
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 319 IVREF--KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNCLGDQKL 376
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVV 436
E LH ++K ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 377 V---ERLHMVLKP-FLLRRIKADVEKSLPPKKEIKIYVGLS-KMQREWYTKILMKDIDIL 431
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LE 480
K K + ++ + N Y D AE P D L
Sbjct: 432 NSSGKTDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLP 489
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
+ E G + LIF+ +LD + + + R+DG TP RQ + + K
Sbjct: 490 RLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHEERQDSIIAYNAPGSSKF 549
Query: 541 A-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV
Sbjct: 550 IFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRYITDNTV 609
Query: 600 DDIVWDVVRSKLE------NLGQVLDGHENSL 625
++ + + KL G+++D + N L
Sbjct: 610 EERIVERAEMKLRLDSIVIQQGRLVDQNLNKL 641
>gi|406836485|ref|ZP_11096079.1| SNF2 family helicase [Schlesneria paludicola DSM 18645]
Length = 927
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 136/474 (28%), Positives = 233/474 (49%), Gaps = 42/474 (8%)
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCF---RDVWPVLILTPSS 226
++++LLP+Q DG+ FA+ GR +LADEMGLGKTIQ I VA F D+ VL++TP+S
Sbjct: 358 LKTELLPYQLDGIAFAV-GAGRAILADEMGLGKTIQGIGVAELFARETDIKKVLVVTPAS 416
Query: 227 LRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL--DGLFNIISYD 284
L+ W I+++ S R+ I S+++R+ + F I +Y+
Sbjct: 417 LKSQWRNEIERF-----------------SGRNVQLIGGSSSERSTQYANEAFFTICNYE 459
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
VL+ + ++ +++ DE +KN ++K T + ++++AL+L+GTP +R +
Sbjct: 460 QVLRDILNIERVDWDLIVLDEGQRIKNWESKTTRMVKGL--RSRFALVLTGTPLENRLDD 517
Query: 345 LFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLA 404
L+ ++ + + +R+ G G N +L + A +++RR + V
Sbjct: 518 LYSVVQFIDDRRLGPGFRFFHRHRVVDERGKVLGYRNLTDLRQTL-APILLRRTRASVKQ 576
Query: 405 QLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIY 464
QLP + + V + ++ + + + +I A K E+ L + L+ ++
Sbjct: 577 QLPPRTDEIVRIPPTQEQLDMSNGHLQNV----SRIVAKKFLTEMDLLALQRELLLCRMT 632
Query: 465 TDSA---EAKIPAVLDYLE--------TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHC 513
DS + P LE E G K ++F+ ML+ I L K+K+
Sbjct: 633 ADSTYLVNKEAPGFSSKLERLNELLESLFEEEGRKAVVFSEWTTMLNLIEPLLHKRKLKY 692
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
+R+DG P RQA+V +FQ + D + L+ AG GL L AA+TVI +L W P L
Sbjct: 693 VRLDGSVPQKQRQAIVHQFQTEPDCQL-FLTTNAGSTGLNLQAANTVINVDLPWNPAVLE 751
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
Q RA+R+GQ V+VY L+ T+++ + + +K E LD + EV
Sbjct: 752 QRIARAYRMGQKRPVDVYVLVTEQTLEERLLGTLAAKHELALAALDAESDIDEV 805
>gi|328785433|ref|XP_396195.3| PREDICTED: chromatin-remodeling complex ATPase chain Iswi isoform 1
[Apis mellifera]
Length = 959
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 251/512 (49%), Gaps = 57/512 (11%)
Query: 149 AIASASAAPDLREKYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTI 204
A ++AS AP R ++ P +I+S +L +Q G+ + + +HG +LADEMGLGKT+
Sbjct: 107 AESNASVAPTTR--FESSPHYIKSGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTL 164
Query: 205 QAIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSG 260
Q I++ FR++ P +++ P S +W ++W PS V L G +
Sbjct: 165 QTISLLGYMKHFRNIPGPHIVIVPKSTLANWMNEFKKWC---PSLRAVCLI---GDAETR 218
Query: 261 FTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
T + R + + G +++ SY++V+K +++ N++ ++ DE+H +KN ++K +
Sbjct: 219 NTFI-----REVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSK-LS 272
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
L K A LLL+GTP + EL+ L L PDV+ + ++ + + G
Sbjct: 273 EILREFKTAN-RLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDSWFNTNSFLG---D 328
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVV 436
S E LH +++ ++RRLK +V L K+ +V++ ++ K R+ Y L +++++V
Sbjct: 329 NSLVERLHAVLRP-FLLRRLKSEVEKGLKPKKEIKVYIGLS-KMQREWYTKVLMKDIDIV 386
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLE 480
G K K +Q++ + N Y D AE P D L
Sbjct: 387 NGAGKIEKMR--LQNILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLP 444
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
+ + + LIF+ MLD + + R+DG T RQ + E+ K
Sbjct: 445 KLQQQESRVLIFSQMTRMLDILEDYCHWRGFQYCRLDGNTAHEDRQRQINEYNAPGSEKF 504
Query: 541 A-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ V V+ + +TV
Sbjct: 505 IFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTV 564
Query: 600 DDIVWDV--VRSKLENL----GQVLDGHENSL 625
++ + + V+ +L+ L G+++D + +L
Sbjct: 565 EEKIVERAEVKLRLDKLVIQQGRLVDAKQTAL 596
>gi|226288690|gb|EEH44202.1| TATA-binding protein-associated factor MOT1 [Paracoccidioides
brasiliensis Pb18]
Length = 1912
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 152/550 (27%), Positives = 239/550 (43%), Gaps = 118/550 (21%)
Query: 165 QIPAHIESKLLPFQRDGV-------RFALQHGGRILLADEMGLGKTIQAIAVATCFRDV- 216
+IP I+++L +Q++GV R+ L HG +L D+MGLGKT+Q + + +
Sbjct: 1312 EIPVAIKAELRSYQQEGVNWLAFLNRYHL-HG---ILCDDMGLGKTLQTLCIVASDHHMR 1367
Query: 217 --------------WPVLILTPSSLRLHWAAMIQQWLNI--------PPSEIVVVLSQLG 254
P LI+ P +L HW I+Q+ PP+E ++L
Sbjct: 1368 AEEFARTGAPEAKRLPSLIICPPTLSGHWQQEIKQYAPFLSCLAYVGPPAE----RARLR 1423
Query: 255 GSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQA 314
GS S IV I SYD+ + N+ + DE H +KN +A
Sbjct: 1424 GSLDS-VDIV---------------ITSYDICRNDNDTFRPLNWNYCVLDEGHLIKNPKA 1467
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
K T A + K+ + L+LSGTP + +EL+ + L P + +R+ K
Sbjct: 1468 KITRAVKCL--KSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAAS 1525
Query: 375 IYQGASNHEE------LHNLMKATV--MIRRLKKDVLAQLPVKRRQQVFLDVAE------ 420
+ +S+ E+ + L K + ++RRLK++VL LP K Q + D+++
Sbjct: 1526 RFSKSSSKEQEAGALAIEALHKQVLPFLLRRLKEEVLNDLPPKILQNYYCDLSDLQRKLF 1585
Query: 421 --------KDMRQIYA---------LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKI 463
KD+ +I +F+ L+ ++ + C S V N I K+
Sbjct: 1586 EDFTKKEQKDIAKIVGSTDKEAKQHIFQALQYMR---RLCNSPALVVKENHKRYNEIQKL 1642
Query: 464 YT-------DSAEA-KIPAVLDYL-----------ETVIEAGCKF------LIFAHHQPM 498
D A A K+ A+ D L E ++ G + L+F + M
Sbjct: 1643 LEAKNSHIRDVAHAPKLSALRDLLVDCGIGVDPSTEGELDTGANYVSPHRALVFCQMKEM 1702
Query: 499 LDAIHQLFLKK---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLT 555
LD + KK V +R+DG A RQ +V +F +L+ GG+GL LT
Sbjct: 1703 LDIVQNDVFKKLLPSVQYLRLDGSVEAAKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT 1762
Query: 556 AASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLG 615
A TVIF E W P IQA DRAHRIGQ VNVY L+ T+++ + ++ R K++
Sbjct: 1763 GADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAS 1822
Query: 616 QVLDGHENSL 625
V++ L
Sbjct: 1823 TVVNQQNAGL 1832
>gi|350403453|ref|XP_003486806.1| PREDICTED: chromatin-remodeling complex ATPase chain Iswi-like
[Bombus impatiens]
Length = 959
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 251/512 (49%), Gaps = 57/512 (11%)
Query: 149 AIASASAAPDLREKYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTI 204
A ++AS AP R ++ P +I+S +L +Q G+ + + +HG +LADEMGLGKT+
Sbjct: 107 AESNASVAPTTR--FESSPHYIKSGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTL 164
Query: 205 QAIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSG 260
Q I++ FR++ P +++ P S +W ++W PS V L G +
Sbjct: 165 QTISLLGYMKHFRNIPGPHIVIVPKSTLANWMNEFKKWC---PSLRAVCLI---GDAETR 218
Query: 261 FTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
T + R + + G +++ SY++V+K +++ N++ ++ DE+H +KN ++K +
Sbjct: 219 NTFI-----REVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSK-LS 272
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
L K A LLL+GTP + EL+ L L PDV+ + ++ + + G
Sbjct: 273 EILREFKTAN-RLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDSWFNTNSFLG---D 328
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVV 436
S E LH +++ ++RRLK +V L K+ +V++ ++ K R+ Y L +++++V
Sbjct: 329 NSLVERLHAVLRP-FLLRRLKSEVEKGLKPKKEIKVYIGLS-KMQREWYTKVLMKDIDIV 386
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLE 480
G K K +Q++ + N Y D AE P D L
Sbjct: 387 NGAGKIEKMR--LQNILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLP 444
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
+ + + LIF+ MLD + + R+DG T RQ + E+ K
Sbjct: 445 KLQQQESRVLIFSQMTRMLDILEDYCHWRGFQYCRLDGNTAHEDRQRQINEYNAPGSEKF 504
Query: 541 A-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ V V+ + +TV
Sbjct: 505 IFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTV 564
Query: 600 DDIVWDV--VRSKLENL----GQVLDGHENSL 625
++ + + V+ +L+ L G+++D + +L
Sbjct: 565 EEKIVERAEVKLRLDKLVIQQGRLVDAKQTAL 596
>gi|298530049|ref|ZP_07017451.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298509423|gb|EFI33327.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 638
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 230/476 (48%), Gaps = 41/476 (8%)
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWP---VLILTPSS 226
I + L P+Q +GVRF L L+ DEMGLGKT+QAIA+ ++V+ VL++T +S
Sbjct: 28 ISTALYPYQIEGVRFGLYRKA-ALIGDEMGLGKTLQAIALGILKKEVFGFNRVLVITLAS 86
Query: 227 LRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVV 286
L+ W I+++ + VVV G ++ F S LF I +Y+ V
Sbjct: 87 LKEQWKREIEKFTR---EQAVVVAGSAGMRQQTYFQDES-----------LFKITNYEAV 132
Query: 287 LKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELF 346
L+ + L +VI DE+ +KN A +TA + + + ++AL+L+GTP ++ +++
Sbjct: 133 LRDVSTLRRFKPDLVILDEAQRIKNF-ATKTADVVKSLPR-KHALVLTGTPLENKLEDVY 190
Query: 347 KQLEALYPDVYKNVHEYG------NRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKK 400
++ L P + + ++ +R K + G N + LH +K V IRR K+
Sbjct: 191 SIVQFLEPHMLAPLWKFAADHFMLSREKKDKILGY----RNLDLLHEKLKPLV-IRRRKE 245
Query: 401 DVLAQLPVKRRQQVFLDVAE--KDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKN 458
DVL LP + +LD++E M Y + L ++ K +Q L +
Sbjct: 246 DVLKDLPDQVTNTYYLDLSEVQAKMHDGYKQYL-LPLLNKKFLTPMDVRRIQELLLQMRR 304
Query: 459 LINKIYTDSAEAKIPAVLDYLE-----TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHC 513
+ + Y +I L LE V+++G K +IF+ M I + + ++
Sbjct: 305 VCDSTYLVDRNTRISPKLKELEGILDEIVVQSGRKMVIFSEWTTMTYLIAKQLSRMGINF 364
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
+ + G P RQAL+ EF + K LS +GG GL L AA V+ EL W P L
Sbjct: 365 VELSGKIPVHKRQALIDEFTNNPECKV-FLSTDSGGTGLNLQAADCVLNFELPWNPARLN 423
Query: 574 QAEDRAHRIGQVS-SVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
Q R +RIGQ S S+NV L++ +++++ + + K E V DG + +E S
Sbjct: 424 QRIGRVNRIGQTSTSINVINLVSKNSIEEKILAGIHLKTELFSGVFDGGVDMVEFS 479
>gi|358398626|gb|EHK47977.1| hypothetical protein TRIATDRAFT_133110 [Trichoderma atroviride IMI
206040]
Length = 1890
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 148/542 (27%), Positives = 236/542 (43%), Gaps = 104/542 (19%)
Query: 165 QIPAHIESKLLPFQRDGVR---FALQHGGRILLADEMGLGKTIQAIAVA----------- 210
QIP I+++L +Q+DGV F ++ +L D+MGLGKT+Q I +
Sbjct: 1291 QIPVAIKAELRSYQQDGVNWLNFLNKYHLHGILCDDMGLGKTLQTICIVASDHHQRQEEF 1350
Query: 211 --TCFRDV--WPVLILTPSSLRLHWAAMIQQW---LNI-----PPSEIVVVLSQLGGSNR 258
T DV P LI+ P +L HW I+ + L++ PP E + +LG ++
Sbjct: 1351 AKTQAPDVRRLPSLIVCPPTLSGHWQQEIKTYAPFLSVTAYVGPPIERKAMKDRLGDTD- 1409
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
IV I SYDV IL ++ V+ DE H +KN +AK T
Sbjct: 1410 ----IV---------------ITSYDVTRNDSEILEKHSWNYVVLDEGHLIKNPKAKITQ 1450
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
A + + + L+L+GTP + +EL+ + L P + +R+ K Y
Sbjct: 1451 AVKRL--ASNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRYSK 1508
Query: 379 ASNHEE------LHNLMKATV--MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF 430
AS+ E+ + L K + ++RRLK++VL LP K Q + D+++ ++++ F
Sbjct: 1509 ASSKEQEAGALAIEALHKQVLPFLLRRLKEEVLNDLPPKILQNYYCDLSDL-QKKLFEDF 1567
Query: 431 RELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLET--------- 481
+ + K + +A + ++E + F + K+ A P Y ET
Sbjct: 1568 TKKQGKKIQAEAGREDKEAKQHIFQALQYMRKLCNSPAMVMKPGSDLYAETQKILQKQGT 1627
Query: 482 -----------------VIEAGC------------------KFLIFAHHQPMLDAIHQLF 506
+I+ G + LIF + MLD +
Sbjct: 1628 SIEDAHHAPKLTALKDLLIDCGIGDDRDDANDPLYQPIKPHRALIFCQMKEMLDMVQTKV 1687
Query: 507 LKK---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
LK+ V +R+DG RQ +V +F +L+ GG+GL LT A TVIF
Sbjct: 1688 LKEMLPSVSYLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLTGADTVIFV 1747
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
E W P +QA DRAHRIGQ VNVY L+ T+++ + + R K++ V++
Sbjct: 1748 EHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFKIDVASTVVNQQNA 1807
Query: 624 SL 625
L
Sbjct: 1808 GL 1809
>gi|325183015|emb|CCA17469.1| hypothetical protein SELMODRAFT_162307 [Albugo laibachii Nc14]
Length = 1363
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 228/479 (47%), Gaps = 68/479 (14%)
Query: 177 FQRDGVRFA--LQHGG-RILLADEMGLGKTIQAIAVATCFRDV----WPVLILTPSSLRL 229
+Q +G+ + L H G +LADEMGLGKT+Q I+V F P ++L P S
Sbjct: 262 YQLEGLNWMVNLAHQGINGILADEMGLGKTLQTISVLAYFSQFENISGPHIVLVPKSTLS 321
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIV-------SSNTKRNIPLDGLFNIIS 282
+W +W PS VV +L G+ + ++ SS+T R P D + +
Sbjct: 322 NWMMEFHRWC---PSLRVV---KLHGNKQERKDVIQDQLCPGSSDTTR--PFD--VCVTT 371
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
+++ +K + L ++ +I DE+H +KN +A + A + ++ QY LLL+GTP +
Sbjct: 372 FEMCMKEKTALCKFAWRYLIIDEAHRIKN-EASQFAKVVRLMD-TQYRLLLTGTPLQNNL 429
Query: 343 IELFKQLEALYPDVYKNVHEYGNRY--------CKGGVFGIYQGASNHEELHNLMKATVM 394
EL+ L L PDV+ + E+ + K + G +LH +++ M
Sbjct: 430 HELWALLNFLLPDVFASSEEFDEWFNLDVDDDEAKKQMIG---------QLHKILRP-FM 479
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSL 452
+RRLK DV LP K+ +F+ ++ + +Y L R+++ + GK+ A S +Q++
Sbjct: 480 LRRLKADVEKSLPPKKETLLFVGMSLM-QKALYKSLLLRDMDTITGKVGAGVSRSALQNI 538
Query: 453 KFTEKNLINKIYTDSAEAKIPAVLDYL-ETVIE-----------------AGCKFLIFAH 494
+ Y E + LD L + V+E G + L+F
Sbjct: 539 VMQLRKCCGHPYL--FEGQEDRTLDPLGDHVVENCGKMVLLDKLLKKLKQRGSRVLLFTQ 596
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLT 553
+LD +K RIDG T R++ + + E D K +LS +AGG+G+
Sbjct: 597 MTRVLDIFEDFCRMRKYEYCRIDGRTSYEDRESAIEAYNELDSSKFVFLLSTRAGGLGIN 656
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA+DRAHRIGQ VNVY + +D+V++ + + + KL+
Sbjct: 657 LYTADIVILYDSDWNPQADLQAQDRAHRIGQKKEVNVYRFVTSDSVEEKIIERAQQKLK 715
>gi|300121515|emb|CBK22034.2| unnamed protein product [Blastocystis hominis]
Length = 508
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 216/466 (46%), Gaps = 37/466 (7%)
Query: 167 PAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRD--VW-PVL 220
P ++ KLLP+Q GV + + ++G +LADEMGLGKTIQ I + C R+ VW PVL
Sbjct: 16 PKSLKGKLLPYQLQGVSWMMRLFENGSHGMLADEMGLGKTIQVIGLLACLREAGVWGPVL 75
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
I+ P S +W + +WL P E++ + + + TKR +D +
Sbjct: 76 IIAPLSTLGNWVSEFAKWL--PSVEVIKYHGTKEERKQLRTQLQAEETKRG--MDNAVFV 131
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA-LLLSGTPAL 339
SY++V + + +I DE H LKN + + + L+L+GTP
Sbjct: 132 TSYEMVRFDASAFQRVEWFYLIVDEGHRLKNNECQLMQCLFTFAHSPNTSRLILTGTPLQ 191
Query: 340 SRPIELFKQLEALYPDVYKNVHEY----GNRYCKGGVFGIYQGASN--HEELHNLMKATV 393
+ EL+ + L PDV+ + ++ G C F +S ++ N ++ V
Sbjct: 192 NNLKELWSLMHFLLPDVFSSAADFLKWLGVLACSDRRFDFNNSSSESLKADIVNTLRKVV 251
Query: 394 ---MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV---VKGKIKACKSEE 447
+RR+K D+ LP K V+ ++ + +++Y R ++ + ++ +
Sbjct: 252 SPFFLRRVKSDIDIYLPRKVEVLVYTEMTSYE-KELYRFERWCDLGMTLSARLMSTSRNF 310
Query: 448 EVQSLK---------FTEKNLINKIYTDSA----EAKIPAVLDYLETVIEAGCKFLIFAH 494
+Q L+ + EK+ TD + +K+ + + L+ +I G + L+F
Sbjct: 311 RMQILRQLVSHPYNVYEEKSSSGSYITDESIIQKSSKLTLLDNLLKVLIPKGHRVLVFVQ 370
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
L + + I G T + R + +FQ ++D+ +L+ ++GG+G+ L
Sbjct: 371 FVETLHLLEDYCTFRGYENCSIHGSTLQSDRDQEIKDFQSREDIPIFLLTTRSGGLGINL 430
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+AA TVI + W P IQA DRAHR+GQ V VY + T+D
Sbjct: 431 SAADTVILYDSDWNPQQDIQAMDRAHRLGQKRDVVVYRFVTLGTMD 476
>gi|419523971|ref|ZP_14063546.1| helicase conserved C-terminal domain protein [Streptococcus
pneumoniae GA13723]
gi|379556379|gb|EHZ21434.1| helicase conserved C-terminal domain protein [Streptococcus
pneumoniae GA13723]
Length = 790
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 230/493 (46%), Gaps = 60/493 (12%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FR 214
E++D P +++KL +Q++GV++ L H GG +LAD+MGLGKT+Q I + +
Sbjct: 332 EEFDIKPYEVKAKLRSYQKEGVKWLSMLDHYHFGG--ILADDMGLGKTLQTITLLEANLK 389
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKR--NI 272
LIL P+SL +W +++ +P ++ V S T+R I
Sbjct: 390 PDQKALILAPASLLYNWKEEFRKF--VPHKQVEVA--------------YGSKTERIKQI 433
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
I SY ++ +I DE+ +KN+Q K A K YAL
Sbjct: 434 EKSATITITSYPSFRSDLEHYQKQSYDYLILDEAQMIKNSQTKTAQALREFDVKTCYAL- 492
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
SGTP +R E++ + + P + + E+ + + + L++
Sbjct: 493 -SGTPIENRLEEIWSIFQIVLPGLLPSKKEFSKL--------------SPQLVAKLIQPF 537
Query: 393 VMIRRLKKDVLAQLP----------VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKA 442
V+ RR K +VL +LP + Q+ + M+++ + E+ + KI+
Sbjct: 538 VL-RRKKDEVLTELPELSEHLYSNELSSSQKTLYLAQLRRMQEMVSGASAYEIKRHKIEI 596
Query: 443 CKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAI 502
++ + T + DS K+ ++ + L+T+ E G + LIF+ MLD I
Sbjct: 597 LAGLTRLRQICNTPALFLEDYKGDSG--KMDSLFELLDTIREKGSRPLIFSQFTSMLDLI 654
Query: 503 HQLFLKKKVHCIRIDGGTPPASRQALVTEFQ--EKDDVKAAVLSMKAGGVGLTLTAASTV 560
Q KK++ +I G TP RQ +V F EKD ++S+KAGG GL LT A TV
Sbjct: 655 EQELEKKEMSHFKITGQTPSDKRQEMVNLFNQGEKD---CFLISLKAGGTGLNLTGADTV 711
Query: 561 IFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
I +L W P +QA R+HR+GQ V+VY L+ T+++ + ++ SK E VL+G
Sbjct: 712 ILCDLWWNPAVEMQAIGRSHRLGQTKQVDVYRLITLGTIEEKIQELQESKKELFNTVLEG 771
Query: 621 HENSLEVSSSQIR 633
E+ +S I+
Sbjct: 772 QESRSNLSVDDIK 784
>gi|261197521|ref|XP_002625163.1| TBP associated factor [Ajellomyces dermatitidis SLH14081]
gi|239595793|gb|EEQ78374.1| TBP associated factor [Ajellomyces dermatitidis SLH14081]
gi|239606789|gb|EEQ83776.1| TBP associated factor [Ajellomyces dermatitidis ER-3]
Length = 1902
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 148/550 (26%), Positives = 240/550 (43%), Gaps = 118/550 (21%)
Query: 165 QIPAHIESKLLPFQRDGV-------RFALQHGGRILLADEMGLGKTIQAIAVATCFRDV- 216
+IP I+++L +Q++GV R+ L HG +L D+MGLGKT+Q + + +
Sbjct: 1302 EIPVAIKAELRSYQQEGVNWLAFLNRYHL-HG---ILCDDMGLGKTLQTLCIVASDHHMR 1357
Query: 217 --------------WPVLILTPSSLRLHWAAMIQQWLNI--------PPSEIVVVLSQLG 254
P LI+ P +L HW I+Q+ PP+E + + LG
Sbjct: 1358 KEEFARSGAPEARRLPSLIICPPTLSGHWQQEIKQYAPFLSCLAYVGPPAERSRLQNSLG 1417
Query: 255 GSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQA 314
+ I SYD+ ++ N+ + DE H +KN +A
Sbjct: 1418 SVD--------------------VVITSYDICRNDNDVFAPLNWNYCVLDEGHLIKNPKA 1457
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
K T A + K+ + L+LSGTP + +EL+ + L P + +R+ K
Sbjct: 1458 KITLAVKRL--KSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAAS 1515
Query: 375 IYQGASNHEE------LHNLMKATV--MIRRLKKDVLAQLPVKRRQQVFLDVAE------ 420
+ +S+ E+ + L K + ++RRLK++VL LP K Q + D+++
Sbjct: 1516 RFSKSSSKEQEAGALAIEALHKQVLPFLLRRLKEEVLNDLPPKILQNYYCDLSDLQRQLF 1575
Query: 421 --------KDMRQIYA---------LFRELEVVKGKIKACKS-----EEEVQSLKFTEKN 458
KD+ +I +F+ L+ ++ + C S +E + +K+
Sbjct: 1576 EDFTKKEQKDIAKIVGSTDKEAKQHIFQALQYMR---RLCNSPALVVKENHKRYDEIQKS 1632
Query: 459 LI--NKIYTDSAEA-KIPAVLDYL-----------ETVIEAGCKF------LIFAHHQPM 498
L N D A A K+ A+ D L E ++ G + L+F + M
Sbjct: 1633 LAGKNSHIRDVAHAPKLTALRDLLVDCGIGVDPSTEGELDTGASYVSPHRALVFCQMKEM 1692
Query: 499 LDAIHQLFLKK---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLT 555
LD + LKK V +R+DG RQ +V +F +L+ GG+GL LT
Sbjct: 1693 LDIVQNDVLKKLLPSVQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT 1752
Query: 556 AASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLG 615
A TVIF E W P IQA DRAHRIGQ VNVY L+ T+++ + ++ R K++
Sbjct: 1753 GADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAS 1812
Query: 616 QVLDGHENSL 625
V++ L
Sbjct: 1813 TVVNQQNAGL 1822
>gi|449498933|ref|XP_002192409.2| PREDICTED: probable global transcription activator SNF2L1-like
[Taeniopygia guttata]
Length = 1185
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 248/502 (49%), Gaps = 61/502 (12%)
Query: 162 KYDQIPAHIESKLL-PFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATC---FR 214
++++ P++++ L +Q G+ + + ++G +LADEMGLGKT+Q IA+ +R
Sbjct: 297 RFEESPSYVKGGTLRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYR 356
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-RSGFTIVSSNTKRNI 272
++ P ++L P S +W ++W+ PS V L +G + R+ F R++
Sbjct: 357 NIPGPHMVLVPKSTLHNWMNEFKRWV---PSLRAVCL--IGDKDARAAFI-------RDV 404
Query: 273 PLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK--KAQ 328
+ G +++ SY++V+K +++ N++ ++ DE+H +KN ++K + I++ K
Sbjct: 405 MMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSE----IVREFKTT 460
Query: 329 YALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNL 388
LLL+GTP + EL+ L L PDV+ + ++ + + G + E LH +
Sbjct: 461 NRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV---ERLHAV 517
Query: 389 MKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSE 446
+K ++RR+K +V LP K+ +++L ++ K R+ Y L ++++++ K K
Sbjct: 518 LKP-FLLRRIKGEVEKSLPPKKEVKIYLGLS-KMQREWYTRILMKDIDILNSAGKMDKMR 575
Query: 447 EEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFL 490
+ ++ + N Y D AE P D L + E G + L
Sbjct: 576 --LLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLITNSGKMLVLDKLLAKLREQGSRVL 633
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGG 549
+F+ +LD + + + R+DG TP R+ + F + K +LS +AGG
Sbjct: 634 LFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGG 693
Query: 550 VGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRS 609
+G+ L A VI + W P +QA DRAHRIGQ V V+ L+ ++TV++ + +
Sbjct: 694 LGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEI 753
Query: 610 KLE------NLGQVLDGHENSL 625
KL G+++D N L
Sbjct: 754 KLRLDSIVIQQGRLIDQQSNKL 775
>gi|449273767|gb|EMC83176.1| putative global transcription activator SNF2L1, partial [Columba
livia]
Length = 982
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 245/500 (49%), Gaps = 57/500 (11%)
Query: 162 KYDQIPAHIESKLL-PFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATC---FR 214
++++ P++++ L +Q G+ + + ++G +LADEMGLGKT+Q IA+ +R
Sbjct: 94 RFEESPSYVKGGTLRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYR 153
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-RSGFTIVSSNTKRNI 272
++ P ++L P S +W ++W+ PS V L +G + R+ F R++
Sbjct: 154 NIPGPHMVLVPKSTLHNWMNEFKRWV---PSLRAVCL--IGDKDARAAFI-------RDV 201
Query: 273 PLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
+ G +++ SY++V+K +++ N++ ++ DE+H +KN ++K + K
Sbjct: 202 MMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF--KTTNR 259
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
LLL+GTP + EL+ L L PDV+ + ++ + + G + E LH ++K
Sbjct: 260 LLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV---ERLHAVLK 316
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
++RR+K +V LP K+ +++L ++ K R+ Y L ++++++ K K
Sbjct: 317 P-FLLRRIKAEVEKSLPPKKEVKIYLGLS-KMQREWYTRILMKDIDILNSAGKMDKMR-- 372
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIF 492
+ ++ + N Y D AE P D L + E G + L+F
Sbjct: 373 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLITNSGKMLVLDKLLAKLREQGSRVLLF 432
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVG 551
+ +LD + + + R+DG TP R+ + F + K +LS +AGG+G
Sbjct: 433 SQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLG 492
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ L A VI + W P +QA DRAHRIGQ V V+ L+ ++TV++ + + KL
Sbjct: 493 INLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 552
Query: 612 E------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 553 RLDSIVIQQGRLIDQQSNKL 572
>gi|171915261|ref|ZP_02930731.1| helicase, Snf2 family protein [Verrucomicrobium spinosum DSM 4136]
Length = 914
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 141/478 (29%), Positives = 228/478 (47%), Gaps = 48/478 (10%)
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFR---DVWPVLILTPSS 226
++++LLP+Q DG+ FA G R +LADEMGLGKTIQ + VA DV VL++ P+S
Sbjct: 332 LKTELLPYQLDGIAFAAGKG-RAVLADEMGLGKTIQGVGVAEFLARHADVRRVLVVCPAS 390
Query: 227 LRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL---DGLFNIISY 283
L+ W I+++ RS IVS T L D F + +Y
Sbjct: 391 LKSQWKLEIERF-----------------CGRS-VQIVSGKTSERNALYSGDAFFTLCNY 432
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK--KAQYALLLSGTPALSR 341
+ VL+ + +++ ++I DE+ +KN +AK T IIK ++ +AL+L+GTP +R
Sbjct: 433 EQVLRDYLDIERTSWDLIILDEAQRIKNWEAK----TSRIIKGLRSPFALVLTGTPLENR 488
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKD 401
+LF +E + + + + + G G N + L ++ V++RR +
Sbjct: 489 LDDLFSVVEFVDDRRLGPAYRFFHSHRVATETGRVSGYKNLDALRQQLEP-VLLRRTRAS 547
Query: 402 VLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLIN 461
+ LP + + V + E+ + L V I + K E+ L+ + L+
Sbjct: 548 IALDLPPRTTEIVRIPATEEQQQ----LHNSHMVTVNAITSKKFLSEMDLLRLQKALLMA 603
Query: 462 KIYTDSA---EAKIPAV---LDYLETVIEAGC-----KFLIFAHHQPMLDAIHQLFLKKK 510
++ +S + + P LD L ++EA K ++F ML+ I + + K
Sbjct: 604 RMSANSTYLVDKQSPGFSSKLDRLAELLEALSAEPERKIILFTEWTTMLNLIEPILERLK 663
Query: 511 VHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPG 570
+ +R+DG RQALV+EFQ + L+ AG GL L AA TVI +L W P
Sbjct: 664 MDFVRLDGQVAQKKRQALVSEFQGNPKCRV-FLTTNAGSTGLNLQAADTVINVDLPWNPA 722
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
L Q RAHR+GQ V V+ L+ T+++ + + +K E VLD EV+
Sbjct: 723 LLEQRIARAHRMGQKRKVQVHLLVTEGTIEENLLATLGAKHELASAVLDPDSTLQEVA 780
>gi|11035016|gb|AAG01537.2|AF292095_1 imitation switch ISWI [Xenopus laevis]
Length = 1046
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 134/512 (26%), Positives = 249/512 (48%), Gaps = 57/512 (11%)
Query: 150 IASASAAPDLREKYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S ++ +++ PA+++S KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 148 LTESSKTTNVCTRFEDSPAYVKSGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 207
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-RSG 260
I++ +R + P ++L P S +W A ++W+ PS V L +G + R+
Sbjct: 208 TISLLGYMKHYRSIPGPHMVLVPKSTLHNWMAEFKRWV---PSLCAVCL--IGDKDHRAA 262
Query: 261 FTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
F R++ L G +++ SY+++++ +++ N++ ++ DE+H +KN ++K +
Sbjct: 263 FV-------RDVLLPGEWDVCVTSYEMLIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSE 315
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 316 IVREF--KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKL 373
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVV 436
E LH ++K ++RR+K DV L K+ ++++ ++ K R+ Y L ++++++
Sbjct: 374 V---ERLHMVLKP-FLLRRIKADVEKSLKPKKEIKIYVGLS-KMQREWYTKILMKDIDIL 428
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LE 480
K K + ++ + N Y D AE P D L
Sbjct: 429 NSSGKTDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDLHLATNSGKMMVLDKLLP 486
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
+ E + LIF+ +LD + + + R+DG TP RQ + + K
Sbjct: 487 KLKEQDSRILIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHEERQESIIAYNAPGSTKF 546
Query: 541 A-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV
Sbjct: 547 IFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTV 606
Query: 600 DDIVWDVVRSKLE------NLGQVLDGHENSL 625
++ + + KL G+++D + N L
Sbjct: 607 EERIVERAEMKLRLDSIVIQQGRLVDQNLNKL 638
>gi|149013295|ref|ZP_01834053.1| Snf2 family protein, putative [Streptococcus pneumoniae SP19-BS75]
gi|182684567|ref|YP_001836314.1| snf2 family protein [Streptococcus pneumoniae CGSP14]
gi|303253977|ref|ZP_07340097.1| snf2 family protein [Streptococcus pneumoniae BS455]
gi|303258546|ref|ZP_07344526.1| snf2 family protein [Streptococcus pneumoniae SP-BS293]
gi|303262636|ref|ZP_07348576.1| snf2 family protein [Streptococcus pneumoniae SP14-BS292]
gi|303263575|ref|ZP_07349497.1| snf2 family protein [Streptococcus pneumoniae BS397]
gi|303266981|ref|ZP_07352856.1| snf2 family protein [Streptococcus pneumoniae BS457]
gi|303269746|ref|ZP_07355498.1| snf2 family protein [Streptococcus pneumoniae BS458]
gi|387759736|ref|YP_006066714.1| SNF2 protein [Streptococcus pneumoniae INV200]
gi|418189858|ref|ZP_12826370.1| type III restriction enzyme, res subunit [Streptococcus pneumoniae
GA47373]
gi|418200544|ref|ZP_12836987.1| type III restriction enzyme, res subunit [Streptococcus pneumoniae
GA47976]
gi|421296457|ref|ZP_15747166.1| SNF2 family protein [Streptococcus pneumoniae GA58581]
gi|147762960|gb|EDK69906.1| Snf2 family protein, putative [Streptococcus pneumoniae SP19-BS75]
gi|182629901|gb|ACB90849.1| snf2 family protein [Streptococcus pneumoniae CGSP14]
gi|301802325|emb|CBW35079.1| SNF2 protein [Streptococcus pneumoniae INV200]
gi|302599065|gb|EFL66091.1| snf2 family protein [Streptococcus pneumoniae BS455]
gi|302636192|gb|EFL66687.1| snf2 family protein [Streptococcus pneumoniae SP14-BS292]
gi|302640047|gb|EFL70502.1| snf2 family protein [Streptococcus pneumoniae SP-BS293]
gi|302640716|gb|EFL71111.1| snf2 family protein [Streptococcus pneumoniae BS458]
gi|302643498|gb|EFL73770.1| snf2 family protein [Streptococcus pneumoniae BS457]
gi|302646613|gb|EFL76838.1| snf2 family protein [Streptococcus pneumoniae BS397]
gi|353853585|gb|EHE33566.1| type III restriction enzyme, res subunit [Streptococcus pneumoniae
GA47373]
gi|353864085|gb|EHE44003.1| type III restriction enzyme, res subunit [Streptococcus pneumoniae
GA47976]
gi|395895330|gb|EJH06305.1| SNF2 family protein [Streptococcus pneumoniae GA58581]
Length = 1048
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 227/493 (46%), Gaps = 60/493 (12%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FR 214
E++D P +++KL +Q++GV++ L H GG +LAD+MGLGKT+Q I + +
Sbjct: 590 EEFDIKPYEVKAKLRSYQKEGVKWLSMLDHYHFGG--ILADDMGLGKTLQTITLLEANLK 647
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKR--NI 272
LIL P+SL +W +++ +P ++ V S T+R I
Sbjct: 648 PDQKALILAPASLLYNWKEEFRKF--VPHKQVEVA--------------YGSKTERIKQI 691
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
I SY ++ +I DE+ +KN+Q K A K YAL
Sbjct: 692 EKSATITITSYPSFRSDLEHYQKQSYDYLILDEAQMIKNSQTKTAQALREFDVKTCYAL- 750
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
SGTP +R E++ + + P + + E+ +L +
Sbjct: 751 -SGTPIENRLEEIWSIFQIVLPGLLPSKKEFSKL---------------SPQLVAKLIQP 794
Query: 393 VMIRRLKKDVLAQLP----------VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKA 442
++RR K +VL +LP + Q+ + M+++ + E+ + KI+
Sbjct: 795 FVLRRKKDEVLTELPELSEHLYSNELSSSQKTLYLAQLRRMQEMVSGASAYEIKRHKIEI 854
Query: 443 CKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAI 502
++ + T + DS K+ ++ + L+T+ E G + LIF+ MLD I
Sbjct: 855 LAGLTRLRQICNTPALFLEDYKGDSG--KMDSLFELLDTIREKGSRPLIFSQFTSMLDLI 912
Query: 503 HQLFLKKKVHCIRIDGGTPPASRQALVTEFQ--EKDDVKAAVLSMKAGGVGLTLTAASTV 560
Q KK++ +I G TP RQ +V F EKD ++S+KAGG GL LT A TV
Sbjct: 913 EQELEKKEMSHFKITGQTPSDKRQEMVNLFNQGEKD---CFLISLKAGGTGLNLTGADTV 969
Query: 561 IFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
I +L W P +QA R+HR+GQ V+VY L+ T+++ + ++ SK E VL+G
Sbjct: 970 ILCDLWWNPAVEMQAIGRSHRLGQTKQVDVYRLITLGTIEEKIQELQESKKELFNTVLEG 1029
Query: 621 HENSLEVSSSQIR 633
E+ +S I+
Sbjct: 1030 QESRSNLSVDDIK 1042
>gi|359414617|ref|ZP_09207082.1| SNF2-related protein [Clostridium sp. DL-VIII]
gi|357173501|gb|EHJ01676.1| SNF2-related protein [Clostridium sp. DL-VIII]
Length = 980
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 141/475 (29%), Positives = 230/475 (48%), Gaps = 59/475 (12%)
Query: 166 IPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
+P +L +Q G ++ L GG +LADEMGLGKTIQ IA + L
Sbjct: 522 LPDTFVGELREYQMKGFKWFKTLSELGLGG--ILADEMGLGKTIQTIAFLLSEKGKI-TL 578
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
I+ P+SL +W + ++ PS VV++ G+ R ++ L NI
Sbjct: 579 IVCPTSLIYNWKDELHKF---APSLKVVIVH---GAQR---------------IETLNNI 617
Query: 281 ISYDVVLKLQNIL-MSSN------FKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
YDV+L L + N F I DE +KNA A+ T I K ++AL
Sbjct: 618 HDYDVILTTYGTLRLDINYYEDIIFDYCIIDEGQNIKNASAQNTKVIKEIKAKTRFAL-- 675
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV 393
+GTP + IEL+ + + P + + ++ I +G N E L L+K +
Sbjct: 676 TGTPIENNLIELWSIFDFVMPGYLYSKEVFQEKF-------ISRGEDNLESLKLLIKPFI 728
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
+ RR KK+V+ +LP K +++ +++ + +Y+ + ++ +K KIK K + +++ L
Sbjct: 729 L-RRTKKEVMRELPDKVEKKILIEMT-PSQKALYSNY--IKRIKVKIKNNK-DGKIEILS 783
Query: 454 FTEK--------NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQL 505
+ K +LI + Y + K+ A + ++ I+ G K L+F+ LD I +
Sbjct: 784 YLTKLRQICLDPSLILEDY-NGGSGKLEAAVKLIKEHIDTGNKVLLFSQFTSALDKIGER 842
Query: 506 FLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAEL 565
++++ + G T P R LV +F D VK ++S+KAGG GL LT+A+ VI +
Sbjct: 843 LNNEEINFFHLQGKTRPKDRIKLVNQFNRSDAVKVFLISLKAGGTGLNLTSANLVIHFDP 902
Query: 566 SWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
W P QA DRAHRIGQ V V L+A T+++ + + K E + +L G
Sbjct: 903 WWNPAVEDQATDRAHRIGQEKEVKVIRLIAKGTIEEKIILLQEDKKELINDILTG 957
>gi|442611152|ref|ZP_21025858.1| hypothetical protein PALB_28210 [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
gi|441747080|emb|CCQ11920.1| hypothetical protein PALB_28210 [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
Length = 1370
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 227/492 (46%), Gaps = 62/492 (12%)
Query: 166 IPAHIESKLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
IPA ++ L P+Q GV +A++ G LAD+MGLGKT+QAIAV + P +++
Sbjct: 895 IPAQLKGSLRPYQHQGVEWAMRLAHWGAGACLADDMGLGKTLQAIAVIVSRASLGPSMVV 954
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+S+ +W + ++L PS +V L + + P D + ++S
Sbjct: 955 APTSVCANWQS---EFLRFAPSLKIVNLGHIHSAEAR-----MDRLNHLQPFDCI--LVS 1004
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
Y ++ +L+N L S +++ ++ADE+ FLKN + R+ + K+ + + L+GTP +
Sbjct: 1005 YSLMQRLENELQSIHWQTIVADEAQFLKNPLSGRSKSAYRF--KSGFKMALTGTPIENNL 1062
Query: 343 IELFKQLEALYPDVYKNVHEYGNRY---CKGGVFGIYQGASNHEELHNLMKATVMIRRLK 399
EL+ + P + N+ + R+ + E L L+ + ++RR K
Sbjct: 1063 TELWSIFRFINPGLLGNLKVFNQRFNVPIEKANDDPVAAKKAREGLKYLL-SPFLLRRTK 1121
Query: 400 KDVLAQLPVKRRQQVFLDVAEKDM-------------------------RQIYALFRELE 434
+ VL LP K + + +++ ++ RQ+ L E
Sbjct: 1122 EQVLKSLPHKTEINLDVQLSQAELAFYESVRLSAIETLSETAQLKNAGERQLRML---AE 1178
Query: 435 VVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAH 494
+VK + C + V+S + E + IN + K+ G K LIF+
Sbjct: 1179 LVKLRQACCAPQLLVESSEI-ESSKINLLLELLEGLKV------------NGHKVLIFSQ 1225
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
L I +K +DG TP R+ + FQ + D ++S+KAGG GL L
Sbjct: 1226 FVAFLQLIKAQLIKHNYRFNYLDGSTPVNVRKTQIDAFQ-RGDSDVFLISLKAGGFGLNL 1284
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
TAAS VI + W P QA DR HRIGQ V +Y L+AN T++ + D+ K
Sbjct: 1285 TAASYVIHMDPWWNPAVENQASDRVHRIGQEKPVTIYRLVANQTIEARIVDLHAKKQALA 1344
Query: 615 GQVL-DGHENSL 625
Q+L +G+E +L
Sbjct: 1345 DQLLQEGNEQTL 1356
>gi|195124267|ref|XP_002006615.1| GI18485 [Drosophila mojavensis]
gi|193911683|gb|EDW10550.1| GI18485 [Drosophila mojavensis]
Length = 1020
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 237/488 (48%), Gaps = 49/488 (10%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++D PA+I+ ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +
Sbjct: 114 RFDASPAYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFK 173
Query: 215 -DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P +++ P S +W ++W PS V L +G + I R++
Sbjct: 174 NQAGPHIVIVPKSTLQNWVNEFKKWC---PSLRAVCL--IGDQDTRNTFI------RDVL 222
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
L G +++ SY++ ++ +++ N++ ++ DE+H +KN ++K + L K A L
Sbjct: 223 LPGEWDVCVTSYEMCIREKSVFKKFNWRYMVIDEAHRIKNEKSK-LSEILREFKTAN-RL 280
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PDV+ + ++ + G + LH ++K
Sbjct: 281 LITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDALVT---RLHAVLKP 337
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK +V +L K+ ++F+ ++ K R Y L +++++V G K K +
Sbjct: 338 -FLLRRLKAEVEKRLKPKKEMKIFVGLS-KMQRDWYTKVLLKDIDIVNGAGKVEKMR--L 393
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLIFA 493
Q++ + N Y D AE P A+LD L + E G + LIF+
Sbjct: 394 QNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFS 453
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + + + R+DG TP R + E+ ++ K +LS +AGG+G+
Sbjct: 454 QMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEYNMENSTKFIFMLSTRAGGLGI 513
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA DRAHRIGQ V V+ L+ TV++ + + KL
Sbjct: 514 NLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLR 573
Query: 613 NLGQVLDG 620
V+ G
Sbjct: 574 LDKMVIQG 581
>gi|150017499|ref|YP_001309753.1| non-specific serine/threonine protein kinase [Clostridium
beijerinckii NCIMB 8052]
gi|149903964|gb|ABR34797.1| Non-specific serine/threonine protein kinase [Clostridium
beijerinckii NCIMB 8052]
Length = 1085
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 140/501 (27%), Positives = 243/501 (48%), Gaps = 63/501 (12%)
Query: 148 RAIASASAAPDLREKYDQI-------PAHIESKLLPFQRDGVRF-----ALQHGGRILLA 195
R I S DL+E+ I P +++KL +Q++G + L GG +L
Sbjct: 593 RYINSCDEIKDLKERLSNIKDKAFQPPYGLQAKLRKYQKEGYNWLRTLDYLGFGG--ILG 650
Query: 196 DEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG 255
DEMGLGKT+Q I + D LI+ P+SL +W ++ P +I + G
Sbjct: 651 DEMGLGKTLQTITLLLSKPDS-KTLIIAPTSLIYNWKNEFNKF--APSMKIAIC----NG 703
Query: 256 SNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNIL------MSSNFKIVIADESHFL 309
+++ N YDV+L N+L + NF I DE+ +
Sbjct: 704 VKEEREELIN-------------NYKEYDVILTTYNLLRRDIELYNMNFDYCILDEAQNI 750
Query: 310 KNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCK 369
KN + + + I KA+ L+GTP + +EL+ + + P N ++ RY +
Sbjct: 751 KNQSSLSSKSVKEI--KARIRFALTGTPIENSLMELWSIFDFIMPGYLYNEKKFVTRYHR 808
Query: 370 GGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLP--VKRRQQVFLDVAEKDMRQIY 427
+ +G EEL+ L+K ++ RR KK+V+ +LP +++R V L +K + + Y
Sbjct: 809 R----LEEGPEILEELNRLVKPFIL-RRYKKNVIKELPDKIEKRLLVPLSDEQKVVYETY 863
Query: 428 ALFRELEVVKGKIKACK-SEEEVQSLKFTEKNLINKIYTD---------SAEAKIPAVLD 477
A + + ++++ K++ + S+ +++ L + K + +I D + KI A+++
Sbjct: 864 ANYTK-DLIQKKVEDFEFSKSKIEILAYITK--LRQICLDPSVTMDNYLGSSGKIDALIE 920
Query: 478 YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD 537
LE I+ G K L+F+ +L I ++ +K +DG +R +V EF ++
Sbjct: 921 LLEQSIDEGHKILVFSQFTSVLKNISKILKEKNFLFSYLDGSVSSINRMKMVDEFNNGEN 980
Query: 538 VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAND 597
++S+KAGG GL LT+A VI + W P QA DRAHRIGQ + V V L+A
Sbjct: 981 T-VFLVSLKAGGTGLNLTSADIVIHFDPWWNPAVEDQATDRAHRIGQKNVVEVIKLIAQG 1039
Query: 598 TVDDIVWDVVRSKLENLGQVL 618
T+++ + ++ SK E + ++L
Sbjct: 1040 TIEEKIVELQDSKRELINKIL 1060
>gi|418139947|ref|ZP_12776772.1| type III restriction enzyme, res subunit [Streptococcus pneumoniae
GA13338]
gi|418180977|ref|ZP_12817546.1| type III restriction enzyme, res subunit [Streptococcus pneumoniae
GA41688]
gi|353843049|gb|EHE23094.1| type III restriction enzyme, res subunit [Streptococcus pneumoniae
GA41688]
gi|353904726|gb|EHE80176.1| type III restriction enzyme, res subunit [Streptococcus pneumoniae
GA13338]
Length = 1040
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 227/493 (46%), Gaps = 60/493 (12%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FR 214
E++D P +++KL +Q++GV++ L H GG +LAD+MGLGKT+Q I + +
Sbjct: 582 EEFDIKPYEVKAKLRSYQKEGVKWLSMLDHYHFGG--ILADDMGLGKTLQTITLLEANLK 639
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKR--NI 272
LIL P+SL +W +++ +P ++ V S T+R I
Sbjct: 640 PDQKALILAPASLLYNWKEEFRKF--VPHKQVEVA--------------YGSKTERIKQI 683
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
I SY ++ +I DE+ +KN+Q K A K YAL
Sbjct: 684 EKSATITITSYPSFRSDLEHYQKQSYDYLILDEAQMIKNSQTKTAQALREFDVKTCYAL- 742
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
SGTP +R E++ + + P + + E+ +L +
Sbjct: 743 -SGTPIENRLEEIWSIFQIVLPGLLPSKKEFSKL---------------SPQLVAKLIQP 786
Query: 393 VMIRRLKKDVLAQLP----------VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKA 442
++RR K +VL +LP + Q+ + M+++ + E+ + KI+
Sbjct: 787 FVLRRKKDEVLTELPELSEHLYSNELSSSQKTLYLAQLRRMQEMVSGASAYEIKRHKIEI 846
Query: 443 CKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAI 502
++ + T + DS K+ ++ + L+T+ E G + LIF+ MLD I
Sbjct: 847 LAGLTRLRQICNTPALFLEDYKGDSG--KMDSLFELLDTIREKGSRPLIFSQFTSMLDLI 904
Query: 503 HQLFLKKKVHCIRIDGGTPPASRQALVTEFQ--EKDDVKAAVLSMKAGGVGLTLTAASTV 560
Q KK++ +I G TP RQ +V F EKD ++S+KAGG GL LT A TV
Sbjct: 905 EQELEKKEMSHFKITGQTPSDKRQEMVNLFNQGEKD---CFLISLKAGGTGLNLTGADTV 961
Query: 561 IFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
I +L W P +QA R+HR+GQ V+VY L+ T+++ + ++ SK E VL+G
Sbjct: 962 ILCDLWWNPAVEMQAIGRSHRLGQTKQVDVYRLITLGTIEEKIQELQESKKELFNTVLEG 1021
Query: 621 HENSLEVSSSQIR 633
E+ +S I+
Sbjct: 1022 QESRSNLSVDDIK 1034
>gi|237744605|ref|ZP_04575086.1| SWF/SNF family helicase [Fusobacterium sp. 7_1]
gi|229431834|gb|EEO42046.1| SWF/SNF family helicase [Fusobacterium sp. 7_1]
Length = 1088
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 142/500 (28%), Positives = 240/500 (48%), Gaps = 44/500 (8%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQH-----GGRILLADEMGLGKTIQAIAVATCF 213
+K ++IPA + L +Q GV + L+ GG +LAD+MGLGKT+Q I
Sbjct: 617 FEQKIEEIPAKYKKILREYQIVGVEWMLKLRSMNLGG--ILADDMGLGKTLQVITYLESV 674
Query: 214 RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
+ P LI+TP+SL L+W ++ + V +LS G +R + SN K +
Sbjct: 675 KRERPCLIITPASLILNWENEFNKF-----NSSVSILSIYG--DRKNREDLLSNLKNEVV 727
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
I SYD + + ++ + F +I DE+ ++KN + K A I +++ L L
Sbjct: 728 ------ITSYDYLKRDIDLYENIEFDTIILDEAQYIKNHKTKAAQAVKKI--NSEFKLAL 779
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV 393
+GTP + E++ + L N + Y + V + + E L N+++ +
Sbjct: 780 TGTPLENSLAEIWSIFDFLMNGYLFNYDYFYKNYERAIVLQAEKNVT--ERLKNMVEPFI 837
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDV--AEKDMRQIY------ALFRELEVVKGKIKACKS 445
+ RRLKKDVL +LP K + F+++ EK++ Q L + ++V KI+
Sbjct: 838 L-RRLKKDVLKELPEKIEETYFVEMNQEEKNLYQANLVKINETLAQSIDVNTNKIEVLAM 896
Query: 446 EEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQL 505
+++ + + L I S+ +KI A ++ ++ IE + L+F+ +LD + Q
Sbjct: 897 LTKLRQICIDPRLLYEDI--SSSSSKINACIELIKKSIENKQRILLFSSFTTVLDLVAQE 954
Query: 506 FLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAEL 565
+ + G T R LV +FQ + V ++S+KAGG GL LT AS VI +
Sbjct: 955 CDNLSIPYFMLTGETNKVKRNQLVEDFQ-NEAVPLFLISLKAGGTGLNLTKASVVIHLDP 1013
Query: 566 SWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSL 625
W QA DRAHRIGQ +V V+ L+ +T+++ + ++ K E ++ + S
Sbjct: 1014 WWNISAQNQATDRAHRIGQEDTVQVFNLITKNTIEEKILNLQNKKKELSDIFVENSKGSF 1073
Query: 626 EVSSSQIRSSPAKQKTLDSF 645
SS K++ LD F
Sbjct: 1074 --------SSLTKEELLDLF 1085
>gi|406912772|gb|EKD52316.1| hypothetical protein ACD_62C00058G0002 [uncultured bacterium]
Length = 959
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 142/472 (30%), Positives = 224/472 (47%), Gaps = 52/472 (11%)
Query: 165 QIPAHIESKLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIAVATCFRDV--WPV 219
++ A + L +Q++GV F + G +LAD+MGLGKTIQ IA R P
Sbjct: 487 ELSADFKGDLRVYQQEGVNWLHFLKRFGFGGILADDMGLGKTIQTIAFINQERQTKKLPS 546
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
L++ P+S+ +W I++ P VV L G NRS + N
Sbjct: 547 LVVCPTSVVENW---IRECTRFAPQMKVVALV---GKNRSSIFKEAENND--------IV 592
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
I SY ++ + + N+ +I DE+ +KN + K A I KA+Y L LSGTP
Sbjct: 593 ITSYPLIQRDLDEYSKRNWYYLIMDEAQKVKNHRTKTHEAFCQI--KAKYKLALSGTPIE 650
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVM---IR 396
+R +EL+ + + P + + + + I +G N+++ +K +M +R
Sbjct: 651 NRLMELWSIFQIVMPGFLMSQTGFKRYWAQP----IEKG--NNQDRRTELKQKLMPFILR 704
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL-EVVKGKIKACKSEEEVQSLKFT 455
R K VL +LP K + ++ EK L+RE+ E K +I + V+ F+
Sbjct: 705 RTKDQVLKELPAKTETLHYCELTEKQK----LLYREIAEYSKSEIFKNIDSKGVEKSYFS 760
Query: 456 -------------EKNLINKIYTD--SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLD 500
+L+NK KI + +LE VI+ G + L+F+ ML
Sbjct: 761 ILTALLRLRQICCHPSLVNKDMNAPFDESGKIQELFPFLEEVIDEGHRILLFSQFVEMLQ 820
Query: 501 AIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTV 560
I + + +DG T +RQA++ EFQE +D K +LS+KAGGVG+ LT A V
Sbjct: 821 IIQTGINQFGWQSVYLDGST--KNRQAVIDEFQENEDNKIFLLSLKAGGVGINLTGADYV 878
Query: 561 IFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
I + W P QA DRAHRIGQ V VY ++ +T+++ + ++ + K E
Sbjct: 879 IHFDPWWNPAVENQATDRAHRIGQEKPVFVYRMITRETIEEKIHNMQQRKKE 930
>gi|148228303|ref|NP_001083868.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Xenopus laevis]
gi|49899007|gb|AAH76715.1| ISWI protein [Xenopus laevis]
Length = 1046
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 134/512 (26%), Positives = 249/512 (48%), Gaps = 57/512 (11%)
Query: 150 IASASAAPDLREKYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S ++ +++ PA+++S KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 148 LTESSKTTNVCTRFEDSPAYVKSGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 207
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-RSG 260
I++ +R + P ++L P S +W A ++W+ PS V L +G + R+
Sbjct: 208 TISLLGYMKHYRSIPGPHMVLVPKSTLHNWMAEFKRWV---PSLCAVCL--IGDKDHRAA 262
Query: 261 FTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
F R++ L G +++ SY+++++ +++ N++ ++ DE+H +KN ++K +
Sbjct: 263 FV-------RDVLLPGEWDVCVTSYEMLIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSE 315
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 316 IVREF--KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKL 373
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVV 436
E LH ++K ++RR+K DV L K+ ++++ ++ K R+ Y L ++++++
Sbjct: 374 V---ERLHMVLKP-FLLRRIKADVEKSLKPKKEIKIYVGLS-KMQREWYTKILMKDIDIL 428
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LE 480
K K + ++ + N Y D AE P D L
Sbjct: 429 NSSGKTDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDLHLATNSGKMMVLDKLLP 486
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
+ E + LIF+ +LD + + + R+DG TP RQ + + K
Sbjct: 487 KLKEQDSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHEERQESIIAYNAPGSTKF 546
Query: 541 A-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV
Sbjct: 547 IFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTV 606
Query: 600 DDIVWDVVRSKLE------NLGQVLDGHENSL 625
++ + + KL G+++D + N L
Sbjct: 607 EERIVERAEMKLRLDSIVIQQGRLVDQNLNKL 638
>gi|158334343|ref|YP_001515515.1| SNF2 family helicase [Acaryochloris marina MBIC11017]
gi|158304584|gb|ABW26201.1| helicase, SNF2 family, putative [Acaryochloris marina MBIC11017]
Length = 1407
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 242/489 (49%), Gaps = 36/489 (7%)
Query: 158 DLREKYDQIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFR 214
D++ Q+P ++++L +Q++G + L H G LAD+MGLGKT+QA+AV
Sbjct: 934 DVQALQPQLPTTLQAELRDYQQEGFEWLARLSHWGVGACLADDMGLGKTLQALAVMLTRA 993
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P L++ P+S+ L+W + Q++ + P Q G S R + P
Sbjct: 994 PEGPALVIAPTSVGLNWISEAQRFAPTLRPL-------QFGTSQRQELL------DQLQP 1040
Query: 274 LDGLFNIISYDVVLK--LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
D L + SY ++ + + +L +++++ DE+ +KN KR+ A + + +A++ L
Sbjct: 1041 FDLL--VCSYGLLQQEEVAQMLAQVKWQMIVLDEAQAIKNMTTKRSQAAMNL--QAEFKL 1096
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L +GTP + EL+ + P + ++ + ++ Q + + L L++
Sbjct: 1097 LTTGTPIENHLGELWNLFRFINPGLLGSMERFNQQF--AAPIEKSQDSQARQRLKKLIQP 1154
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL------EVVKGKIKACKS 445
++RR K VL +LP + + ++++E++M AL R+ + K +
Sbjct: 1155 -FLLRRTKSQVLEELPSRTEITLQVELSEEEMALYEALRRQAIANLADSDAQAGAKHLQV 1213
Query: 446 EEEVQSLKFTEKNLINKIYTDS--AEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
E+ L+ T N + +S A AK+ + LE ++ K L+F+ L +
Sbjct: 1214 LAEIMKLRRTCCN-AQLVMPESPPASAKLQLFGEVLEELLANHHKALVFSQFVDHLKILQ 1272
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
KK++ +DG TP RQ V FQ + + ++S+KAGG GL LTAA VI
Sbjct: 1273 DYLEKKQIAYQYLDGSTPAKIRQLRVKAFQSGEG-EVFLISLKAGGTGLNLTAADYVIHM 1331
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
+ W P QA DRAHRIGQ V +Y L+A +T+++ + D+ R K + +L+G E
Sbjct: 1332 DPWWNPAVEDQASDRAHRIGQRRPVTIYRLVAKNTIEEKIVDLHRHKRDLADSLLEGTEI 1391
Query: 624 SLEVSSSQI 632
S ++S+ ++
Sbjct: 1392 SGKISTDEL 1400
>gi|419515131|ref|ZP_14054756.1| helicase conserved C-terminal domain protein [Streptococcus
pneumoniae England14-9]
gi|379635680|gb|EIA00239.1| helicase conserved C-terminal domain protein [Streptococcus
pneumoniae England14-9]
Length = 1028
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 227/493 (46%), Gaps = 60/493 (12%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FR 214
E++D P +++KL +Q++GV++ L H GG +LAD+MGLGKT+Q I + +
Sbjct: 570 EEFDIKPYEVKAKLRSYQKEGVKWLSMLDHYHFGG--ILADDMGLGKTLQTITLLEANLK 627
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKR--NI 272
LIL P+SL +W +++ +P ++ V S T+R I
Sbjct: 628 PDQKALILAPASLLYNWKEEFRKF--VPHKQVEVA--------------YGSKTERIKQI 671
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
I SY ++ +I DE+ +KN+Q K A K YAL
Sbjct: 672 EKSATITITSYPSFRSDLEHYQKQSYDYLILDEAQMIKNSQTKTAQALREFDVKTCYAL- 730
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
SGTP +R E++ + + P + + E+ +L +
Sbjct: 731 -SGTPIENRLEEIWSIFQIVLPGLLPSKKEFSKL---------------SPQLVAKLIQP 774
Query: 393 VMIRRLKKDVLAQLP----------VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKA 442
++RR K +VL +LP + Q+ + M+++ + E+ + KI+
Sbjct: 775 FVLRRKKDEVLTELPELSEHLYSNELSSSQKTLYLAQLRRMQEMVSGASAYEIKRHKIEI 834
Query: 443 CKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAI 502
++ + T + DS K+ ++ + L+T+ E G + LIF+ MLD I
Sbjct: 835 LAGLTRLRQICNTPALFLEDYKGDSG--KMDSLFELLDTIREKGSRPLIFSQFTSMLDLI 892
Query: 503 HQLFLKKKVHCIRIDGGTPPASRQALVTEFQ--EKDDVKAAVLSMKAGGVGLTLTAASTV 560
Q KK++ +I G TP RQ +V F EKD ++S+KAGG GL LT A TV
Sbjct: 893 EQELEKKEMSHFKITGQTPSDKRQEMVNLFNQGEKD---CFLISLKAGGTGLNLTGADTV 949
Query: 561 IFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
I +L W P +QA R+HR+GQ V+VY L+ T+++ + ++ SK E VL+G
Sbjct: 950 ILCDLWWNPAVEMQAIGRSHRLGQTKQVDVYRLITLGTIEEKIQELQESKKELFNTVLEG 1009
Query: 621 HENSLEVSSSQIR 633
E+ +S I+
Sbjct: 1010 QESRSNLSVDDIK 1022
>gi|331003253|ref|ZP_08326760.1| hypothetical protein HMPREF0491_01622 [Lachnospiraceae oral taxon 107
str. F0167]
gi|330412906|gb|EGG92286.1| hypothetical protein HMPREF0491_01622 [Lachnospiraceae oral taxon 107
str. F0167]
Length = 1137
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 142/488 (29%), Positives = 236/488 (48%), Gaps = 45/488 (9%)
Query: 159 LREKYDQI-------PAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQA 206
L EK+D I P +++ L +Q++G ++ L GG +LAD+MGLGKT+Q
Sbjct: 654 LIEKFDNIKNMNFTPPPEVKNILREYQKEGFKWLRSVEELGFGG--ILADDMGLGKTLQI 711
Query: 207 IA----VATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFT 262
I+ C R + +I+ P+SL +W+ I ++ +E ++ +S L
Sbjct: 712 ISFLMDAKKCGR-LRKAIIVCPASLVYNWSEEISKF----DTENILTVSVLAAGKEERQK 766
Query: 263 IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLP 322
I+ + +I I SYD + + ++ F I DE+ F+KN A
Sbjct: 767 ILEEHDGVDIY------ISSYDTLRRDISLYHDIKFSHQIIDEAQFIKNQNTGVAKAVKA 820
Query: 323 IIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNH 382
+ KA L+GTP +R EL+ + + P + + + ++Y V G N
Sbjct: 821 L--KADVKFALTGTPIENRLSELWSIFDYIMPGFLYSYNSFRSKYENSIV---KDGDENS 875
Query: 383 EELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKI 440
+L + M + ++RRLK +V LP K +++ +K+ + +Y L R EV++G
Sbjct: 876 AKLLSKMISPFVLRRLKSEVAMDLPDKI-EEIRTSRFDKEQQLVYDIELSRLKEVLEGDK 934
Query: 441 KACKSE----EEVQSLK--FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAH 494
+ S+ E+ L+ + LI + Y+ A AK+ +D +++ IEAG K L+F+
Sbjct: 935 EYNSSKMIILSEITKLRQICCDPGLIFENYSGGA-AKLETCVDLVKSGIEAGHKILLFSQ 993
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
MLD I + F ++ + I G T R LV +F DD ++S+KAGG GL L
Sbjct: 994 FTSMLDIIEKRFKEENISSYMITGSTSKEKRIQLVNDFN-NDDTNVFLISLKAGGTGLNL 1052
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
A VI + W QA DRAHRIGQ ++V VY L+ T+++ + + SK +
Sbjct: 1053 VGADIVIHYDPWWNFAAQNQATDRAHRIGQKNNVTVYRLITKGTIEERIVKLQESKKDLA 1112
Query: 615 GQVLDGHE 622
+VL+ E
Sbjct: 1113 DRVLNFEE 1120
>gi|302874211|ref|YP_003842844.1| SNF2-related protein [Clostridium cellulovorans 743B]
gi|307689525|ref|ZP_07631971.1| SNF2-related protein [Clostridium cellulovorans 743B]
gi|302577068|gb|ADL51080.1| SNF2-related protein [Clostridium cellulovorans 743B]
Length = 1078
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 234/492 (47%), Gaps = 58/492 (11%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
+IP +E + +Q+ G R+ +G +LADEMGLGKT+Q+IA ++ L+
Sbjct: 608 EIPTSLEKIMREYQKVGFRWFKTLAVYGMGGILADEMGLGKTLQSIAFLASEKEKGKSLV 667
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
+ P+SL +W Q+ + P +V++ G +S + ++ I
Sbjct: 668 VAPTSLIYNWE---QEIIRFCPELKAIVIA---GDKKSRLEAIKEMDYYDVI------IT 715
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSR 341
SY + K I +F+ +I DE+ +KN T A I K ++AL +GTP +
Sbjct: 716 SYPTLTKDMEIYEDISFEYMIIDEAQKIKNRDTLTTKAVKDIKAKIRFAL--TGTPIENS 773
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRY----CKGGVFGIYQGASNHEELHNLMKAT--VMI 395
EL+ + + P + + Y K G +++ L NL K ++
Sbjct: 774 LTELWSIFDFVMPGYIFSHRRFSELYEVPIIKNG---------DNKALDNLNKKIKPFIL 824
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +V+ +LP K +++++D+ K+ +++Y F ++ ++G++ ++EV+ F
Sbjct: 825 RRLKSEVIKELPEKIEKRLYVDMT-KEQKKLY--FAYVKHIQGEL-----DDEVKEKGFN 876
Query: 456 EKNL--------INKIYTDSAE---------AKIPAVLDYLETVIEAGCKFLIFAHHQPM 498
+ + +I D A K A+ + L V+ K L+F+ +
Sbjct: 877 NSKIKILAALTRLRQICCDPASFLDDYKGGSGKYEALSEVLAEVLAGNHKVLLFSQFTSV 936
Query: 499 LDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAS 558
L I +L K K+ +DG T R +V EF DD + ++S+KAGG GL LT A
Sbjct: 937 LKNIEKLLTKNKITYKYLDGSTKSQERLKIVDEFNN-DDSQVFLISLKAGGTGLNLTGAD 995
Query: 559 TVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
VI + W P QA DRAHRIGQ ++V V L++ T+++ + + R K E + VL
Sbjct: 996 VVIHFDPWWNPSVENQATDRAHRIGQKNTVEVIKLISKGTIEEKIEKLQRKKTEVIKNVL 1055
Query: 619 DGHENSLEVSSS 630
D NS V SS
Sbjct: 1056 DEDLNSNNVLSS 1067
>gi|452821607|gb|EME28635.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria
sulphuraria]
Length = 1026
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 139/484 (28%), Positives = 233/484 (48%), Gaps = 63/484 (13%)
Query: 167 PAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDV----WPV 219
P +++ + P+Q +G+ F + +HG +LADEMGLGKT+Q I++ R P
Sbjct: 134 PYNVKGTMRPYQLEGLNFLIGLYEHGLNGILADEMGLGKTLQTISLLAFLRGYRHINGPH 193
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
LI+ P S +WA +W PS ++ G +N K L F+
Sbjct: 194 LIIVPKSTIGNWALEFDKWC---PSFNILRFH--------GNQDDRANLKEQRLLSKDFD 242
Query: 280 II--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
+ +Y+V +K +N L ++ VI DE+H +KN + + ++Q LLL+GTP
Sbjct: 243 VCLTTYEVAIKEKNSLRRFMWRYVIIDEAHRIKNENSILSQVVRTF--ESQSRLLLTGTP 300
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNH--EELHNLMKATVMI 395
+ EL+ L L PD++ + ++ + + V + A N ++LH +++ +I
Sbjct: 301 LQNNLHELWALLNFLLPDIFASAEDFDSWFS--SVESDNENAKNEVIQQLHAVLRP-FLI 357
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKG-------------KI 440
RRLK +V LP K+ +F ++ + IY L ++++ + G ++
Sbjct: 358 RRLKSEVEHDLPPKKETVLFTKLSSVQL-DIYRNLLKKDIDAINGPGGDRVRLLNILMQL 416
Query: 441 KACKSEE------EVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAH 494
+ C + E +SL +++I K+ + L + K LIF+
Sbjct: 417 RKCCNHPYLFDGVEDRSLDPFGEHVIESC------GKLMLLDKLLSRLRRGNHKVLIFSQ 470
Query: 495 HQPMLDAIHQLF---LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGV 550
MLD + ++ +C RIDG T R +++ EF D K +LS +AGG+
Sbjct: 471 MTRMLDILEDYCSPNMRDYPYC-RIDGNTEGEIRDSMIEEFNRPDSDKFIFLLSTRAGGL 529
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
G+ L AA TVI + W P +QA DRAHRIGQ + VNVY L++ +TV++ ++R
Sbjct: 530 GINLAAADTVILYDSDWNPQVDLQAMDRAHRIGQKNPVNVYRLISENTVEE---RILRKA 586
Query: 611 LENL 614
LE L
Sbjct: 587 LEKL 590
>gi|383866448|ref|XP_003708682.1| PREDICTED: chromatin-remodeling complex ATPase chain Iswi-like
[Megachile rotundata]
Length = 1009
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 141/512 (27%), Positives = 252/512 (49%), Gaps = 57/512 (11%)
Query: 149 AIASASAAPDLREKYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTI 204
A ++AS AP R ++ P +I+S +L +Q G+ + + ++G +LADEMGLGKT+
Sbjct: 107 AESNASVAPTTR--FESSPHYIKSGELRDYQIRGLNWMISLYENGINGILADEMGLGKTL 164
Query: 205 QAIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSG 260
Q I++ FR++ P +++ P S +W ++W P V ++ R+
Sbjct: 165 QTISLLGYMKHFRNIPGPHIVIVPKSTLANWMNEFKKW--CPTLRAVCLIGD--AETRNT 220
Query: 261 FTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
F R++ + G +++ SY++V+K +++ N++ ++ DE+H +KN ++K +
Sbjct: 221 FI-------RDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSK-LS 272
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
L K A LLL+GTP + EL+ L L PDV+ + ++ + + G
Sbjct: 273 EILREFKTAN-RLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDSWFNTNSFLG---D 328
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVV 436
S E LH +++ ++RRLK +V L K+ +V++ ++ K R+ Y L +++++V
Sbjct: 329 NSLVERLHAVLRP-FLLRRLKSEVEKGLKPKKEIKVYIGLS-KMQREWYTKVLMKDIDIV 386
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLE 480
G K K +Q++ + N Y D AE P D L
Sbjct: 387 NGAGKIEKMR--LQNILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLP 444
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
+ + + LIF+ MLD + + R+DG T RQ + E+ + K
Sbjct: 445 KLQQQESRVLIFSQMTRMLDILEDYCHWRGFQYCRLDGNTAHEDRQRQINEYNAPESEKF 504
Query: 541 A-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ V V+ + +TV
Sbjct: 505 IFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTV 564
Query: 600 DDIVWDV--VRSKLENL----GQVLDGHENSL 625
++ + + V+ +L+ L G+++D + +L
Sbjct: 565 EEKIVERAEVKLRLDKLVIQQGRLVDAKQTAL 596
>gi|336400866|ref|ZP_08581639.1| hypothetical protein HMPREF0404_00930 [Fusobacterium sp. 21_1A]
gi|336161891|gb|EGN64882.1| hypothetical protein HMPREF0404_00930 [Fusobacterium sp. 21_1A]
Length = 1088
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 228/467 (48%), Gaps = 36/467 (7%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQH-----GGRILLADEMGLGKTIQAIAVATCF 213
+K ++IPA + L +Q GV + L+ GG +LAD+MGLGKT+Q I
Sbjct: 617 FEQKIEEIPAKYKKILREYQIVGVEWMLKLRSMNLGG--ILADDMGLGKTLQVITYLESV 674
Query: 214 RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
+ P LI+TP+SL L+W ++ + + +LS G +R + SN K +
Sbjct: 675 KRERPCLIITPASLILNWENEFNKF-----NSSISILSIYG--DRKNREDLLSNLKNEVV 727
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
I SYD + + ++ + F +I DE+ ++KN + K A I +++ L L
Sbjct: 728 ------ITSYDYLKRDIDLYENIEFDTIILDEAQYIKNHKTKAAQAVKKI--NSEFKLAL 779
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV 393
+GTP + E++ + L N + Y + V + + E L N+++ +
Sbjct: 780 TGTPLENSLAEIWSIFDFLMNGYLFNYDYFYKNYERAIVLQAEKNVT--ERLKNMVEPFI 837
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDV--AEKDMRQIY------ALFRELEVVKGKIKACKS 445
+ RRLKKDVL +LP K + F+++ EK++ Q L + ++V KI+
Sbjct: 838 L-RRLKKDVLKELPEKIEETYFVEMNQEEKNLYQANLVKINETLAQSIDVNTNKIEVLAM 896
Query: 446 EEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQL 505
+++ + + L I S+ +KI A ++ ++ IE + L+F+ +LD + Q
Sbjct: 897 LTKLRQICIDPRLLYEDI--SSSSSKINACIELIKKSIENKQRILLFSSFTTVLDLVAQE 954
Query: 506 FLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAEL 565
+ + G T R LV +FQ + V ++S+KAGG GL LT AS VI +
Sbjct: 955 CDNLSIPYFMLTGETNKVKRNQLVEDFQ-NEAVPLFLISLKAGGTGLNLTKASVVIHLDP 1013
Query: 566 SWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
W QA DRAHRIGQ +V V+ L+ +T+++ + ++ K E
Sbjct: 1014 WWNISAQNQATDRAHRIGQEDTVQVFNLITKNTIEEKILNLQNKKKE 1060
>gi|340728394|ref|XP_003402510.1| PREDICTED: LOW QUALITY PROTEIN: chromatin-remodeling complex ATPase
chain Iswi-like [Bombus terrestris]
Length = 959
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 251/512 (49%), Gaps = 57/512 (11%)
Query: 149 AIASASAAPDLREKYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTI 204
A ++AS AP R ++ P +I+S +L +Q G+ + + +HG +LADEMGLGKT+
Sbjct: 107 AESNASVAPTTR--FESSPHYIKSGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTL 164
Query: 205 QAIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSG 260
Q I++ FR++ P +++ P S +W ++W PS V L G +
Sbjct: 165 QTISLLGYMKHFRNIPGPHIVIVPKSTLANWMNEFKKWC---PSLRAVCLI---GDAETR 218
Query: 261 FTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
T + R + + G +++ SY++V+K +++ N++ ++ DE+H +KN ++K +
Sbjct: 219 NTFI-----REVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSK-LS 272
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
L K A LLL+GTP + EL+ L L PDV+ + ++ + + G
Sbjct: 273 EILREFKTAN-RLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDSWFNTNSFLG---D 328
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVV 436
S E LH +++ ++RRLK +V L + +V++ ++ K R+ Y L +++++V
Sbjct: 329 NSLVERLHAVLRP-FLLRRLKSEVEKGLKPXKEIKVYIGLS-KMQREWYTKVLMKDIDIV 386
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLE 480
G K K +Q++ + N Y D AE P D L
Sbjct: 387 NGAGKIEKMR--LQNILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLP 444
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
+ + + LIF+ MLD + + R+DG T RQ + E+ + K
Sbjct: 445 KLQQQESRVLIFSQMTRMLDILEDYCHWRGFQYCRLDGNTAHEDRQRQINEYNAPESEKF 504
Query: 541 A-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ V V+ + +TV
Sbjct: 505 IFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTV 564
Query: 600 DDIVWDV--VRSKLENL----GQVLDGHENSL 625
++ + + V+ +L+ L G+++D + +L
Sbjct: 565 EEKIVERAEVKLRLDKLVIQQGRLVDAKQTAL 596
>gi|307705331|ref|ZP_07642193.1| SNF2 family N-terminal domain protein [Streptococcus mitis SK597]
gi|307621118|gb|EFO00193.1| SNF2 family N-terminal domain protein [Streptococcus mitis SK597]
Length = 1048
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 228/491 (46%), Gaps = 56/491 (11%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FR 214
E++D P +++KL +Q++GV++ L H GG +LAD+MGLGKT+Q I + +
Sbjct: 590 EEFDIKPYEVKAKLRSYQKEGVKWLSMLDHYHFGG--ILADDMGLGKTLQTITLLEANLK 647
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
LIL P+SL +W +++ +P ++ V + + I
Sbjct: 648 PDQKALILAPASLLYNWKEEFRKF--VPHKQVEVAYG------------TKTERIKQIEK 693
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
I SY ++ +I DE+ +KN+Q K A K YAL S
Sbjct: 694 SATITITSYPSFRSDLEHYQKQSYDYLILDEAQMIKNSQTKTAQALREFDVKTCYAL--S 751
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVM 394
GTP +R E++ + + P + + E+ + + + L++ V+
Sbjct: 752 GTPIENRLEEIWSIFQIVLPGLLPSKKEFSKL--------------SPQLVAKLIQPFVL 797
Query: 395 IRRLKKDVLAQLP----------VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACK 444
RR K +VL +LP + Q+ + M+++ A E+ + KI+
Sbjct: 798 -RRKKDEVLTELPELSEHLYSNELSSSQKTLYLAQLRRMQEMVAGASADEIKRHKIEILA 856
Query: 445 SEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
++ + T + DS K+ ++ + L+T+ E G + LIF+ MLD I Q
Sbjct: 857 GLTRLRQICNTPALFLEDYKGDSG--KMDSLFELLDTIREKGSRPLIFSQFTSMLDLIEQ 914
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQ--EKDDVKAAVLSMKAGGVGLTLTAASTVIF 562
KK++ +I G TP RQ +V F EKD ++S+KAGG GL LT A TVI
Sbjct: 915 ELEKKEMSHFKITGQTPSDKRQEMVNLFNQGEKD---CFLISLKAGGTGLNLTGADTVIL 971
Query: 563 AELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
+L W P +QA R+HR+GQ V+VY L+ T+++ + ++ SK E VL+G E
Sbjct: 972 CDLWWNPAVEMQAISRSHRLGQTKQVDVYRLITLGTIEEKIQELQESKKELFNTVLEGQE 1031
Query: 623 NSLEVSSSQIR 633
+ +S I+
Sbjct: 1032 SRSNLSVDDIK 1042
>gi|198455729|ref|XP_001357539.2| GA21216 [Drosophila pseudoobscura pseudoobscura]
gi|198135371|gb|EAL24661.2| GA21216 [Drosophila pseudoobscura pseudoobscura]
Length = 1035
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 243/500 (48%), Gaps = 50/500 (10%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++D P +I+ ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +
Sbjct: 124 RFDASPTYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFK 183
Query: 215 -DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P +++ P S +W ++W P + V ++ G + T + R++
Sbjct: 184 NQAGPHIVIVPKSTLQNWVNEFKKW--CPSLQAVCLI----GDQDTRNTFI-----RDVL 232
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
+ G +++ SY++ ++ +++ N++ ++ DE+H +KN ++K + L K A L
Sbjct: 233 MPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSK-LSEILREFKTAN-RL 290
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PDV+ + ++ + G + LH ++K
Sbjct: 291 LITGTPLQNNLHELWALLNFLLPDVFNSAEDFDEWFNTNTCLG---DDALITRLHAVLKP 347
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK +V +L K+ ++F+ ++ K R Y L +++++V G K K +
Sbjct: 348 -FLLRRLKSEVEKRLKPKKEMKIFVGLS-KMQRDWYTKVLLKDIDIVNGAGKVEKMR--L 403
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLIFA 493
Q++ + N Y D AE P A+LD L + E G + LIF+
Sbjct: 404 QNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFS 463
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + K + R+DG TP R + E+ ++ K +LS +AGG+G+
Sbjct: 464 QMTRMLDILEDYCHWKNYNYCRLDGQTPHEDRNRQIQEYNMENSTKFVFMLSTRAGGLGI 523
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA DRAHRIGQ V V+ L+ TV++ + + KL
Sbjct: 524 NLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLR 583
Query: 613 NLGQVLDGHENSLEVSSSQI 632
V+ G ++ SSQI
Sbjct: 584 LDKMVIQGGR-LVDNRSSQI 602
>gi|229817614|ref|ZP_04447896.1| hypothetical protein BIFANG_02882 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785403|gb|EEP21517.1| hypothetical protein BIFANG_02882 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 1229
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 223/487 (45%), Gaps = 49/487 (10%)
Query: 166 IPAHIESKLLPFQRDGVRFA---LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
+P + L P+Q +G ++ G +LADEMGLGK++Q + + + LI+
Sbjct: 749 VPEALHGILRPYQVEGFQWLATLCDKGFGGILADEMGLGKSLQLLTLLESRKGKGCSLIV 808
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNR-----SGFTIVSSNTKRNIPLDGL 277
P+SL +WAA +++ P + VV R +G + ++ P
Sbjct: 809 CPASLVYNWAAECEKF--TPDQRVEVVAGSKAERRRLLSEVAGLASAKNEGRKERPD--- 863
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
I SYD++ + + F V DE+ ++KN K A + +A Y L+GTP
Sbjct: 864 IIITSYDLLRRDIDEYDGCAFDCVALDEAQYIKNHTTKIAKAVKRL--EAHYRFALTGTP 921
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMI-- 395
+R EL+ + L P + + + RY + I + + ++A V +
Sbjct: 922 IENRLSELWSIFDFLMPGMLGSYARFRERYEQP----ILAPGPDQSVMAGKLQALVGLFI 977
Query: 396 -RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKF 454
RRLK+DVL LP K V + + + + R++YA + +++A S V+ F
Sbjct: 978 KRRLKRDVLTDLPDKFETVVTVRL-QGEQRKLYAAHEQ------RLRA--SLNSVEDADF 1028
Query: 455 --------TEKNLINKI-------YTDS--AEAKIPAVLDYLETVIEAGCKFLIFAHHQP 497
E L+ +I Y D+ A AK+ A+ D + + ++AG K L+F+
Sbjct: 1029 DTNRIRILAELTLLREICCAPKLVYEDANGASAKLDAIDDLVASCMDAGKKVLVFSQFTS 1088
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
LD I F V I G TP R LV +F DDV ++S+KAG GL LT A
Sbjct: 1089 FLDLIGDRFTAHGVPFYTITGETPKRKRVDLVNQFN-MDDVPVFLISLKAGNTGLNLTGA 1147
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
S VI A+ W QA DRAHRIGQ VNVY ++A T+++ + + + K Q
Sbjct: 1148 SVVIHADPWWNAAAQSQATDRAHRIGQTQDVNVYQIVAQHTIEERILRLQKEKSALARQF 1207
Query: 618 LDGHENS 624
DG N
Sbjct: 1208 TDGAANG 1214
>gi|219112733|ref|XP_002178118.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411003|gb|EEC50932.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 995
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 213/457 (46%), Gaps = 54/457 (11%)
Query: 193 LLADEMGLGKTIQAIAVATCF----RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
+LADEMGLGKTIQAI++ +++ P L++ P S +W +W P + ++
Sbjct: 266 ILADEMGLGKTIQAISLIAYLMEFKQNLGPYLVIVPLSTLSNWQNEFLKW--CPAARLIC 323
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADES 306
G + R+ G FN++ +Y+ ++K + L +++ I DE
Sbjct: 324 Y---------KGTPGLRKEIYRDQVRTGHFNVLLTTYEYIIKDKKFLRKIDWQYAIVDEG 374
Query: 307 HFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNR 366
H +KNAQ+K A TL +Y +LL+GTP ++ EL+ L L P ++ +V +
Sbjct: 375 HRMKNAQSK-FAVTLGTQYSTRYRVLLTGTPLMNDLSELWSLLNFLLPTIFNSVETFDQW 433
Query: 367 YCKGGVFGIYQGASNHEE----------------LHNLMKATVMIRRLKKDVLAQLPVKR 410
+ + F + G SN +E LH L++ M+RR+K +VL QLP K
Sbjct: 434 FSRP--FEQFGGGSNTDEGDDLLSNEERILVIHRLHELLRP-FMLRRVKSEVLDQLPEKV 490
Query: 411 RQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK---FTEKNLINKIYTDS 467
+ + +++ +++Y + V + ++ + L + + N Y S
Sbjct: 491 EKVLRCELSSW-QKELYKQISKKAVADTALMGTDTQAPSRGLNNIVMQLRKVCNHPYLFS 549
Query: 468 AEA------------KIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
E K+ + L + AG + L+F ++ + F + +R
Sbjct: 550 PEGYHINDIIVRSSGKMALLDQMLPKLRAAGHRVLMFTQMTAVMTIMEDYFALRGYKSLR 609
Query: 516 IDGGTPPASRQALVTEFQEKDD-VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
+DG TP R+ + +F D +LS +AGG+GL LT+A TVI + W P +Q
Sbjct: 610 LDGSTPAEEREKRMYKFNAPDSPYFVFLLSTRAGGLGLNLTSADTVIIFDSDWNPMMDLQ 669
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
A+DRAHRIGQ S V+V+ L+ V++ + KL
Sbjct: 670 AQDRAHRIGQRSDVSVFRLITYSPVEEKILSRANEKL 706
>gi|380022776|ref|XP_003695213.1| PREDICTED: chromatin-remodeling complex ATPase chain Iswi-like
[Apis florea]
Length = 959
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 251/512 (49%), Gaps = 57/512 (11%)
Query: 149 AIASASAAPDLREKYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTI 204
A ++A+ AP R ++ P +I+S +L +Q G+ + + +HG +LADEMGLGKT+
Sbjct: 107 AESNANVAPTTR--FESSPHYIKSGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTL 164
Query: 205 QAIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSG 260
Q I++ FR++ P +++ P S +W ++W PS V L G +
Sbjct: 165 QTISLLGYMKHFRNIPGPHIVIVPKSTLANWMNEFKKWC---PSLRAVCLI---GDAETR 218
Query: 261 FTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
T + R + + G +++ SY++V+K +++ N++ ++ DE+H +KN ++K +
Sbjct: 219 NTFI-----REVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSK-LS 272
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
L K A LLL+GTP + EL+ L L PDV+ + ++ + + G
Sbjct: 273 EILREFKTAN-RLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDSWFNTNSFLG---D 328
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVV 436
S E LH +++ ++RRLK +V L K+ +V++ ++ K R+ Y L +++++V
Sbjct: 329 NSLVERLHAVLRP-FLLRRLKSEVEKGLKPKKEIKVYIGLS-KMQREWYTKVLMKDIDIV 386
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLE 480
G K K +Q++ + N Y D AE P D L
Sbjct: 387 NGAGKIEKMR--LQNILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLP 444
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
+ + + LIF+ MLD + + R+DG T RQ + E+ K
Sbjct: 445 KLQQQESRVLIFSQMTRMLDILEDYCHWRGFQYCRLDGNTAHEDRQRQINEYNAPGSEKF 504
Query: 541 A-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ V V+ + +TV
Sbjct: 505 IFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTV 564
Query: 600 DDIVWDV--VRSKLENL----GQVLDGHENSL 625
++ + + V+ +L+ L G+++D + +L
Sbjct: 565 EEKIVERAEVKLRLDKLVIQQGRLVDAKQTAL 596
>gi|325270384|ref|ZP_08136989.1| helicase [Prevotella multiformis DSM 16608]
gi|324987328|gb|EGC19306.1| helicase [Prevotella multiformis DSM 16608]
Length = 1326
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 249/479 (51%), Gaps = 37/479 (7%)
Query: 166 IPAHIESKLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
+P ++ +L +Q +G + + G + LAD+MGLGKT+Q I + ++ L++
Sbjct: 865 VPRTLQVQLRDYQEEGFEWMSKLTAWGAGVCLADDMGLGKTLQTITLLLEQQEKGASLVV 924
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+S+ +W ++++ P+ V VL+Q G +R G + + G II+
Sbjct: 925 APASVVPNWRNELRRF---APTLQVTVLNQSG--DRPGDIKAAKS--------GEVIIIT 971
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
Y ++ Q+ L + +V DE+H +KNA K + A + + +AQ ++L+GTP +
Sbjct: 972 YALLNIQQDDLTDREWNVVCLDEAHTIKNANTKMSKAAMKL--QAQRKVILTGTPIQNHL 1029
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK--ATVMIRRLKK 400
EL+ + + P + + ++ ++ + I +G ++ L K + ++RR K
Sbjct: 1030 AELWNLFQFINPGLLGSAEQFKKKF----ILPI-EGDNDKSRQSQLRKLISPFLLRRTKS 1084
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE-----EVQSLK-- 453
+V+ +LP K ++ ++++ +M RE E K++A +++ E+ L+
Sbjct: 1085 EVIDELPAKNEIRLPVELSSDEMAMYEVRRRETE---EKVRANAADKVSTLAEITRLRQM 1141
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHC 513
+L+++ + + +K+ A +D E++ ++G + L+F+ LD + + K ++
Sbjct: 1142 ACSCSLVDRKWKLPS-SKVLAFIDLAESLNDSGNRALVFSQFTSFLDEVRRAMDKARLPY 1200
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
+ +DG TP A R+ LV +FQ ++S+KAGG+GL LT A+ VI + W P
Sbjct: 1201 LYLDGSTPMAQREKLVQDFQ-TGRCPFFLISLKAGGLGLNLTGANYVIHLDPWWNPAIEQ 1259
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
QA DRA+RIGQ V VY+L++ T+++ + + R+K +L+G + S ++ ++
Sbjct: 1260 QATDRAYRIGQKQEVTVYHLISQHTIEEKILRLHRTKRNLSDSLLEGTDISHAMTQEEL 1318
>gi|407477309|ref|YP_006791186.1| hypothetical protein Eab7_1462 [Exiguobacterium antarcticum B7]
gi|407061388|gb|AFS70578.1| Hypothetical protein Eab7_1462 [Exiguobacterium antarcticum B7]
Length = 876
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 148/560 (26%), Positives = 259/560 (46%), Gaps = 67/560 (11%)
Query: 66 FSKEQVPKLSVKFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSA 125
FS + +P++ +K L + + + TY + + + +RL+ L +
Sbjct: 315 FSMDGIPEVELKQVLRS---LVTRKTYHRLKSGQYVSFETRAFEQLQRLFQQ----LETT 367
Query: 126 EKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQI----------PAHIESKLL 175
E+ + E S I NL LV + A DL E++ ++ P + +L
Sbjct: 368 ERDMLEASIRVPAIANLKHLVGASFLHLHA--DLMERWLEVKNGRDIPLLLPQALHQQLY 425
Query: 176 PFQRDGVRFALQHGGRI---LLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWA 232
P+QR G++F + R +LADEMGLGKTIQAI R LI+ P+SL +WA
Sbjct: 426 PYQRAGIQFLVNLAARDCHGILADEMGLGKTIQAIGYLET-RPPGRTLIVAPASLLHNWA 484
Query: 233 AMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNI 292
A + ++ P++ V +L+ GS + + R++P DG+F +ISY + +
Sbjct: 485 AELARF---APAKTVYLLA---GSRKQRLQAL-----RDLPADGVF-LISYPSLRARADA 532
Query: 293 LMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEAL 352
+ + I DE+ KN A+ + K ++AL +GTP +R +++ +
Sbjct: 533 HQKIEYDLAIFDEAQHFKNPTAQTAVRLRRLRAKRRFAL--TGTPLENRTDDIWSIFRVI 590
Query: 353 YPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQ 412
+P + ++ + + +H E+ ++ ++RR K++VL P KR
Sbjct: 591 FPSLLPDLRTFQD--------------WSHMEIKRFLQP-FLLRRTKQEVLHDFPTKRLS 635
Query: 413 QVFLDVA--EKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSA-- 468
+ ++ +K + Y +L+ ++ + K E+ ++ L + + +I D A
Sbjct: 636 HYYTELGPTQKKLYASYLAKLQLDTLR-HLDETKREDRIKLLAGLTR--LRQICCDPALF 692
Query: 469 -------EAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
K+ ++ +E I AG + LIF+ + ML I + ++++ + G TP
Sbjct: 693 VENYTGESTKLDLLMTLIEEKIAAGHRILIFSQYTKMLARIRERLAERQLTHFVLTGDTP 752
Query: 522 PASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHR 581
R AL F +V ++S+KAGG GL L A TVI + W P QA DRAHR
Sbjct: 753 IEDRVALCDRFN-AGEVDLFLISLKAGGTGLNLATADTVILYDSWWNPAVEQQAADRAHR 811
Query: 582 IGQVSSVNVYYLLANDTVDD 601
+GQ SSV V LL T+++
Sbjct: 812 LGQQSSVEVIKLLMTGTIEE 831
>gi|343429407|emb|CBQ72980.1| probable ISW2-ATPase component of a two subunit chromatin
remodeling complex [Sporisorium reilianum SRZ2]
Length = 1110
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 229/480 (47%), Gaps = 51/480 (10%)
Query: 163 YDQIPAHIES-KLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDVWP 218
+++ PA+++ K+ +Q G+ + +L H G +LADEMGLGKT+Q I+ RD
Sbjct: 217 FNESPAYVKGGKMRDYQVQGLNWMISLYHNGINGILADEMGLGKTLQTISFLGYLRDFRD 276
Query: 219 V----LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
L++ P S +W +W +P +V L GS ++ + +P
Sbjct: 277 TPGFHLVVVPKSTLDNWYREFHRW--VPGFNVVT----LKGSKEEREKVIQDHL---LPQ 327
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
D I +Y++ L+ ++ L +++ ++ DE+H +KN + + +++ LL++
Sbjct: 328 DFDVLITTYEMCLREKSALKKLSWEYIVIDEAHRIKNVDSMLSQIVRAFNSRSR--LLIT 385
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE----LHNLMK 390
GTP + +EL+ L L PDV+ N ++ + + KG +G N ++ LH +++
Sbjct: 386 GTPLQNNLMELWSLLNFLLPDVFSNSEDFES-WFKG------KGDENQDQVVQQLHKVLR 438
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
++RR+K DV L K+ +F+ + E R+ Y L ++++ V G + + +
Sbjct: 439 P-FLLRRVKADVEKSLLPKKEINIFVGLTEM-QRKWYKSILEKDIDAVNGGVGKKEGKTR 496
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIF 492
+ ++ + N Y D AE P D L + + G + LIF
Sbjct: 497 LLNIVMQLRKCCNHPYLFDGAEPGPPFTTDEHLVDNSGKMVILDRLLHKMKQKGSRVLIF 556
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAAVLSMKAGGVG 551
+ MLD + L ++ RIDGGT R A + E+ + D +L+ +AGG+G
Sbjct: 557 SQMSRMLDILEDYCLFREYQYCRIDGGTAHDDRIAAIDEYNKPGSDKFVFLLTTRAGGLG 616
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ LT A V+ + W P +QA DRAHRIGQ V V+ + +++ + D KL
Sbjct: 617 INLTTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVYVFRFVTEHAIEERILDRAAQKL 676
>gi|195148944|ref|XP_002015422.1| GL11075 [Drosophila persimilis]
gi|194109269|gb|EDW31312.1| GL11075 [Drosophila persimilis]
Length = 1033
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 237/488 (48%), Gaps = 49/488 (10%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++D P +I+ ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +
Sbjct: 124 RFDASPTYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFK 183
Query: 215 -DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P +++ P S +W ++W P + V ++ G + T + R++
Sbjct: 184 NQAGPHIVIVPKSTLQNWVNEFKKW--CPSLQAVCLI----GDQDTRNTFI-----RDVL 232
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
+ G +++ SY++ ++ +++ N++ ++ DE+H +KN ++K + L K A L
Sbjct: 233 MPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSK-LSEILREFKTAN-RL 290
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PDV+ + ++ + G + LH ++K
Sbjct: 291 LITGTPLQNNLHELWALLNFLLPDVFNSAEDFDEWFNTNTCLG---DDALITRLHAVLKP 347
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK +V +L K+ ++F+ ++ K R Y L +++++V G K K +
Sbjct: 348 -FLLRRLKSEVEKRLKPKKEMKIFVGLS-KMQRDWYTKVLLKDIDIVNGAGKVEKMR--L 403
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLIFA 493
Q++ + N Y D AE P A+LD L + E G + LIF+
Sbjct: 404 QNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFS 463
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + K + R+DG TP R + E+ ++ K +LS +AGG+G+
Sbjct: 464 QMTRMLDILEDYCHWKNYNYCRLDGQTPHEDRNRQIQEYNMENSTKFVFMLSTRAGGLGI 523
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA DRAHRIGQ V V+ L+ TV++ + + KL
Sbjct: 524 NLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLR 583
Query: 613 NLGQVLDG 620
V+ G
Sbjct: 584 LDKMVIQG 591
>gi|110803396|ref|YP_698309.1| DNA/RNA helicase, SNF2 [Clostridium perfringens SM101]
gi|110683897|gb|ABG87267.1| putative helicase [Clostridium perfringens SM101]
Length = 1069
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 235/489 (48%), Gaps = 62/489 (12%)
Query: 166 IPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
+P + ++L P+Q++G ++ L GG +LAD+MGLGKT+Q IA + ++
Sbjct: 588 VPKALNAELRPYQKEGFKWINEITDLGFGG--VLADDMGLGKTLQIIAFLLSQKKSKSIV 645
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRS----------GFTIVSSNTKR 270
++ P+S+ +W +++ PS I V L S R G I N K
Sbjct: 646 VV-PTSVIYNWMDEFEKF---APS-IRVGLVHGSKSKRDKVLRDFKRGLGIKIEEKNLKE 700
Query: 271 NIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPI 323
+ YDV+L L + +F I DE+ +KN A+ T + I
Sbjct: 701 K-------SYEKYDVLLTTYGTLKNDEKAYENLSFDYCIIDEAQNIKNPSAQATLSVKNI 753
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE 383
K++ + L+GTP + +EL+ + + P + R+ SN
Sbjct: 754 --KSRCNIALTGTPIENNLMELWSIFDFVMPGYLFTKERFRERFI--------LDESNLS 803
Query: 384 ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC 443
EL +L+ ++RRLK++VL++LP K ++ +++ K +Q+Y+ + + +K ++
Sbjct: 804 ELKSLI-TPFILRRLKEEVLSELPEKLEKKYLVEMKGK-QKQLYSFY--VNAIKNQLNEN 859
Query: 444 KSEEEVQSLK---FTEKNLINKIYTD---------SAEAKIPAVLDYLETVIEAGCKFLI 491
KS E+ K F + +I D +K+ V + ++ E+G K L+
Sbjct: 860 KSSEKSGRDKINLFAYLTKLREICLDPSLVVPDYKGGSSKLTVVKEIVKDASESGKKILL 919
Query: 492 FAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVG 551
F+ +L I + F K+ + + +DGGT R V +F E ++K ++S+KAGGVG
Sbjct: 920 FSQFTSVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGVG 979
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
L LT+AS VI + W P QA DRAHR GQ + V V L+A DT+++ + + K
Sbjct: 980 LNLTSASVVIHFDPWWNPAVEDQATDRAHRFGQENKVEVIKLVAKDTIEEKIVLMQEDKR 1039
Query: 612 ENLGQVLDG 620
E + ++DG
Sbjct: 1040 ELIQSLMDG 1048
>gi|398412117|ref|XP_003857388.1| SNF2 family DNA-dependent ATPase domain-containing protein
[Zymoseptoria tritici IPO323]
gi|339477273|gb|EGP92364.1| SNF2 family DNA-dependent ATPase domain-containing protein
[Zymoseptoria tritici IPO323]
Length = 1901
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 152/558 (27%), Positives = 246/558 (44%), Gaps = 136/558 (24%)
Query: 166 IPAHIESKLLPFQRDGV-------RFALQHGGRILLADEMGLGKTIQAIAVA-------- 210
IP I+++L +Q++GV R+ L HG +L D+MGLGKT+Q + +
Sbjct: 1302 IPVAIKAELRSYQQEGVNWLAFLNRYHL-HG---VLCDDMGLGKTLQTLCIVASDHHLRA 1357
Query: 211 -----TCFRDV--WPVLILTPSSLRLHWAAMIQQWLNI--------PPSEIVVVLSQLGG 255
T DV P LI+ P +L HW I+ + PP+E V QL
Sbjct: 1358 EEFAKTQAPDVRRLPSLIICPPTLTGHWKQEIRTYAPFLTAVAYAGPPAERGKVRDQLAT 1417
Query: 256 SNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK 315
++ I SYD+ +IL N+ + DE H +KN +AK
Sbjct: 1418 AD--------------------VVITSYDIARNDADILTPINWNYCVLDEGHLIKNPKAK 1457
Query: 316 RTAAT--LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVF 373
T A LP + + L+LSGTP + +EL+ + L P + +R+ K
Sbjct: 1458 VTQAVKRLP----SNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFQDRFAKPIAA 1513
Query: 374 GIYQGASNHEE------LHNLMKATV--MIRRLKKDVLAQLPVKRRQQVFLDVAE----- 420
+ +S+ E+ + +L K + ++RRLK++VL LP K Q + D+++
Sbjct: 1514 SRFAKSSSKEQEAGALAIESLHKQVLPFLLRRLKEEVLNDLPPKILQNYYCDLSDLQKKL 1573
Query: 421 ---------KDMRQIYA---------LFRELEVVKGKIKAC-----------KSEEEVQS 451
K ++ + +F+ L+ ++ K C KS E++QS
Sbjct: 1574 FDDFTKKEAKSLQDMAGNPDKEAKQHIFQALQYMR---KLCNSPAMVMKEGHKSYEDIQS 1630
Query: 452 LKFTEKNLINKIYTDSAEA-KIPAVLDYLETVIEAGC--------------------KFL 490
+ +K+ + TD A K+ A+ D L ++ G + L
Sbjct: 1631 MLAKDKSSL----TDPKHAPKLTALRDLL---VDCGIGVQHADNGGVPTADQAVSQHRAL 1683
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCI---RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKA 547
IF + ML+ + LKK + + R+DG P+ RQ +V +F + +L+
Sbjct: 1684 IFCQMKEMLNMVEDTVLKKMLPGVTFSRLDGSIEPSKRQDIVNKFNSDPSIDCLLLTTSV 1743
Query: 548 GGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVV 607
GG+GL LT A TVIF E W P +QA DRAHRIGQ VNVY L+ T+++ + ++
Sbjct: 1744 GGLGLNLTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLVTRGTLEEKILNLQ 1803
Query: 608 RSKLENLGQVLDGHENSL 625
R K++ V++ L
Sbjct: 1804 RFKIDVASTVVNQQNAGL 1821
>gi|71014727|ref|XP_758754.1| hypothetical protein UM02607.1 [Ustilago maydis 521]
gi|46098544|gb|EAK83777.1| hypothetical protein UM02607.1 [Ustilago maydis 521]
Length = 1108
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 228/480 (47%), Gaps = 51/480 (10%)
Query: 163 YDQIPAHIES-KLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDVWP 218
+++ PA+++ K+ +Q G+ + +L H G +LADEMGLGKT+Q I+ RD
Sbjct: 211 FNESPAYVKGGKMRDYQVQGLNWMISLYHNGINGILADEMGLGKTLQTISFLGYLRDFRE 270
Query: 219 V----LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
L++ P S +W +W +P +V L GS ++ + +P
Sbjct: 271 TPGFHLVVVPKSTLDNWYREFHRW--VPGFNVVT----LKGSKEEREKVIQDHL---LPQ 321
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
D I +Y++ L+ ++ L +++ ++ DE+H +KN + + +++ LL++
Sbjct: 322 DFDVLITTYEMCLREKSALKKLSWEYIVIDEAHRIKNVDSMLSQIVRAFNSRSR--LLIT 379
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE----LHNLMK 390
GTP + +EL+ L L PDV+ N ++ + KG +G N ++ LH +++
Sbjct: 380 GTPLQNNLMELWSLLNFLLPDVFSNSEDF-ESWFKG------KGDENQDQVVQQLHKVLR 432
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
++RR+K DV L K+ +F+ + E R+ Y L ++++ V G + + +
Sbjct: 433 P-FLLRRVKADVEKSLLPKKEINIFVGLTEM-QRKWYKSILEKDIDAVNGGVGKKEGKTR 490
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIF 492
+ ++ + N Y D AE P D L + + G + LIF
Sbjct: 491 LLNIVMQLRKCCNHPYLFDGAEPGPPFTTDEHLVDNSGKMVILDRLLHKMKQKGSRVLIF 550
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVG 551
+ MLD + L ++ RIDGGT R A + E+ + K +L+ +AGG+G
Sbjct: 551 SQMSRMLDILEDYCLFREYKYCRIDGGTAHDDRIAAIDEYNKPGSEKFVFLLTTRAGGLG 610
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ LT A V+ + W P +QA DRAHRIGQ V V+ + +++ + D KL
Sbjct: 611 INLTTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVYVFRFVTEHAIEERILDRAAQKL 670
>gi|257069450|ref|YP_003155705.1| DNA/RNA helicase, superfamily II, SNF2 family [Brachybacterium
faecium DSM 4810]
gi|256560268|gb|ACU86115.1| DNA/RNA helicase, superfamily II, SNF2 family [Brachybacterium
faecium DSM 4810]
Length = 1110
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 145/531 (27%), Positives = 249/531 (46%), Gaps = 54/531 (10%)
Query: 122 LSSAEKVLSEISGYNVEI-ENLHPLVQRAIASAS---AAPDLREKYDQ----IPAHIESK 173
L+ E IS + V++ ++L + IAS A LR D +P ++++
Sbjct: 588 LAEWEPERQRISRFQVDMWDDLQEVADETIASREWERTALSLRTLEDAPVPPLPEALQAE 647
Query: 174 LLPFQRDG---VRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW----PVLILTPSS 226
L P+QR+G + F HG +LAD+MGLGKT+Q +A+ R+ P L++ P+S
Sbjct: 648 LRPYQREGYAWLTFLFSHGLGGVLADDMGLGKTLQTLALVAHARERSASEPPFLVVAPAS 707
Query: 227 LRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL-FNIISYDV 285
+ W ++ P V VL + T+ + T + G + SY V
Sbjct: 708 VLPVWRREAER---FAPGLEVRVLDR---------TVAARGTDLPTAMLGADLVVTSYSV 755
Query: 286 VLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIEL 345
+ + S+ F+ + DE+ F+KN +++ A + +A + L ++GTP + +L
Sbjct: 756 LRIDEEEFASTRFQGFVLDEAQFVKNRRSRTHRAAKGV--RAGFRLAITGTPMENSLDDL 813
Query: 346 FKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV---MIRRLKKDV 402
+ L+ + P + + RY I G +H L++ V ++RR K+ V
Sbjct: 814 WAILDLVAPGLLGTAIGFRKRYT----LPIETG--DHPGRMELLRRRVRPFLLRRTKELV 867
Query: 403 LAQLPVKRRQ-----------QVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQS 451
A+LP K + V+ V +++ +++ L + ++ + + +S ++
Sbjct: 868 AAELPEKHEEVLTVTLGAEHRAVYDSVLQRERKKVLGLI-DTDLDRSRFIVFRSLTLLRM 926
Query: 452 LKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKV 511
+ + + Y D +K+ A+ D LE VI G + L+F+ LD + +++V
Sbjct: 927 MALDPSLVDPEAYADVPSSKLEALFDRLEEVIGDGHRVLLFSQFTSYLDQVASELERREV 986
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
+DG T R A V F+E D ++S+KAGG GLTLT A V + W P
Sbjct: 987 RYAHLDGST--RDRDAAVAGFREGD-APVFLISLKAGGFGLTLTEADYVFLLDPWWNPAA 1043
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
QA DRAHRIGQ +V VY ++A DT+++ V + R K E + DG E
Sbjct: 1044 ENQAVDRAHRIGQDRTVMVYRMIAEDTIEEKVLALQRRKAELFDALTDGGE 1094
>gi|302697641|ref|XP_003038499.1| hypothetical protein SCHCODRAFT_72893 [Schizophyllum commune H4-8]
gi|300112196|gb|EFJ03597.1| hypothetical protein SCHCODRAFT_72893 [Schizophyllum commune H4-8]
Length = 1076
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/479 (27%), Positives = 227/479 (47%), Gaps = 44/479 (9%)
Query: 163 YDQIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRD---- 215
+++ P+ I + +Q G+ + +L H G +LADEMGLGKT+Q I+ +
Sbjct: 167 FEESPSFINGTMRAYQLQGLNWMVSLHHNGLNGILADEMGLGKTLQTISFLAYLKHHHGI 226
Query: 216 VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P LI+ P S +W ++W P VVL+ GS IV+S R I D
Sbjct: 227 KGPHLIIVPKSTLRNWEREFEKWT---PDFKAVVLT---GSKEERAEIVAS---RLITED 277
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
I SY++ L ++ L +F+ ++ DE+H +KN + + I + + LL++G
Sbjct: 278 FEVCITSYEICLIEKSALKKFSFEYIVIDEAHRIKNVDSILSEVVRSFISRGR--LLITG 335
Query: 336 TPALSRPIELFKQLEALYPDV---YKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
TP + ELF L + P++ YK++ + ++ GV + E LH +++
Sbjct: 336 TPLQNNLQELFALLNFICPEIFRDYKDLDSFLHKDTGDGVDEEEKSKRVVEALHKILRP- 394
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY---ALFRELEVVKGKIKACKSEEEV 449
++RR+K DV L K+ +++ ++ DM++ + L ++++ V G + + +
Sbjct: 395 FLLRRVKSDVEKNLLPKKEINIYVGLS--DMQRKWYRSVLEKDIDAVNGLTGKKEGKTRL 452
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFA 493
++ + + Y D AE P D L+++ E G + LIF+
Sbjct: 453 MNMVMQLRKVTCHPYLFDGAEPGPPYTTDEHLVENCGKMLILDKLLKSMKEKGSRVLIFS 512
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + L + RIDGGT R + E+ + D K +L+ +AGG+G+
Sbjct: 513 QMSRMLDILEDYCLFRGYKYCRIDGGTAHDDRITAIDEYNKPDSDKFIFLLTTRAGGLGI 572
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
LT A V+ + W P +QA DRAHRIGQ V V+ + +V++ + + KL
Sbjct: 573 NLTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITEGSVEERMLERAAQKL 631
>gi|422338107|ref|ZP_16419067.1| putative helicase [Fusobacterium nucleatum subsp. polymorphum F0401]
gi|355372745|gb|EHG20084.1| putative helicase [Fusobacterium nucleatum subsp. polymorphum F0401]
Length = 1089
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 141/469 (30%), Positives = 228/469 (48%), Gaps = 40/469 (8%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQH-----GGRILLADEMGLGKTIQAIAVATCF 213
+K ++IPA + L +Q GV + L+ GG +LAD+MGLGKT+Q I
Sbjct: 618 FEQKIEEIPAKYKKILREYQILGVEWMLKLRSMNLGG--ILADDMGLGKTLQVITYLESI 675
Query: 214 RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG-SNRSGFTIVSSNTKRNI 272
P LI+TP+SL L+W ++ + V +LS G NR G SN K +
Sbjct: 676 ERERPCLIITPASLILNWENEFNKF-----NSSVSILSVYGDRKNREGLL---SNLKNEV 727
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
I SYD + + ++ + NF +I DE+ ++KN + K A I +++ L
Sbjct: 728 V------ITSYDYLKRDIDLYENINFDTIILDEAQYIKNHKTKIAQAVKKI--NSEFKLA 779
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNH-EELHNLMKA 391
L+GTP + E++ + L N + Y K V Q N E L N+++
Sbjct: 780 LTGTPLENSLAEIWSIFDFLMNGYLFNYDYFYKNYEKAIVL---QEEKNVIERLKNMVEP 836
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDV--AEKDMRQIY------ALFRELEVVKGKIKAC 443
++ RRLKKDVL +LP K + F+++ EK++ Q L + ++V KI+
Sbjct: 837 FIL-RRLKKDVLKELPEKIEETYFVEMNQEEKNLYQANLVKINETLAQNIDVNTNKIEVL 895
Query: 444 KSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
+++ + + L I S+ +KI A ++ ++ IE K L+F+ +LD +
Sbjct: 896 AMLTKLRQICIDPRLLYENI--SSSSSKINACIELIKKSIENKQKILLFSSFTTVLDLVA 953
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
+ + + G T R LV +FQ + V ++S+KAGG GL LT AS VI
Sbjct: 954 EECDNLSIPYFMLTGETNKVKRNQLVEDFQ-NEAVPLFLISLKAGGTGLNLTKASVVIHL 1012
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
+ W QA DRAHRIGQ +V V+ L+ +T+++ + ++ K E
Sbjct: 1013 DPWWNISAQNQATDRAHRIGQEDTVQVFNLITKNTIEEKIQNLQNKKKE 1061
>gi|195582827|ref|XP_002081227.1| GD10909 [Drosophila simulans]
gi|194193236|gb|EDX06812.1| GD10909 [Drosophila simulans]
Length = 1001
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 241/501 (48%), Gaps = 59/501 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++D PA+I+S ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +
Sbjct: 115 RFDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFK 174
Query: 215 -DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P +++ P S +W ++W PS V L G + T + R++
Sbjct: 175 NQAGPHIVIVPKSTLQNWVNEFKKWC---PSLRAVCLF---GDQDTRNTFI-----RDVL 223
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK--KAQY 329
+ G +++ SY++ ++ +++ N++ ++ DE+H +KN ++K I++ K
Sbjct: 224 MPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSK----LFEIMREFKGGD 279
Query: 330 ALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLM 389
++++GTP + EL+ L L PDV+ + ++ + G + LH ++
Sbjct: 280 NIIITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLG---DDALITRLHAVL 336
Query: 390 KATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEE 447
K ++RRLK +V +L K+ ++F+ ++ K R Y L ++++VV G K K
Sbjct: 337 KP-FLLRRLKAEVEKRLKPKKEMKIFVGLS-KMQRDWYTKVLLKDIDVVNGAGKVEKMR- 393
Query: 448 EVQSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLI 491
+Q++ + N Y D AE P A+LD L + E G + LI
Sbjct: 394 -LQNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLI 452
Query: 492 FAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGV 550
F+ MLD + + + R+DG TP R + EF + K +LS +AGG+
Sbjct: 453 FSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGL 512
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
G+ L A VI + W P +QA DRAHRIGQ V V+ L+ TV++ + + K
Sbjct: 513 GINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVK 572
Query: 611 LE------NLGQVLDGHENSL 625
L G+++D N L
Sbjct: 573 LRLDKMVIQGGRLVDNRSNQL 593
>gi|195380477|ref|XP_002048997.1| GJ21347 [Drosophila virilis]
gi|194143794|gb|EDW60190.1| GJ21347 [Drosophila virilis]
Length = 1021
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 237/488 (48%), Gaps = 49/488 (10%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++D PA+I+ ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +
Sbjct: 115 RFDASPAYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFK 174
Query: 215 -DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P +++ P S +W ++W PS V L +G + I R++
Sbjct: 175 NQAGPHIVIVPKSTLQNWVNEFKKWC---PSLHAVCL--IGDQDTRNTFI------RDVL 223
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
L G +++ SY++ ++ +++ N++ ++ DE+H +KN ++K + L K A L
Sbjct: 224 LPGDWDVCVTSYEMCIREKSVFKKFNWRYMVIDEAHRIKNEKSK-LSEILREFKTAN-RL 281
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PDV+ + ++ + G + LH ++K
Sbjct: 282 LITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDALVT---RLHAVLKP 338
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK +V +L K+ ++F+ ++ K R Y L +++++V G K K +
Sbjct: 339 -FLLRRLKAEVEKRLKPKKELKIFVGLS-KMQRDWYTKVLLKDIDIVNGAGKVEKMR--L 394
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLIFA 493
Q++ + N Y D AE P A+LD L + E G + LIF+
Sbjct: 395 QNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFS 454
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + + + R+DG TP R + E+ ++ K +LS +AGG+G+
Sbjct: 455 QMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEYNMENSTKFIFMLSTRAGGLGI 514
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA DRAHRIGQ V V+ L+ TV++ + + KL
Sbjct: 515 NLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLR 574
Query: 613 NLGQVLDG 620
V+ G
Sbjct: 575 LDKMVIQG 582
>gi|426202092|gb|EKV52015.1| SNF2 family DNA-dependent ATPase [Agaricus bisporus var. bisporus
H97]
Length = 1094
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 232/478 (48%), Gaps = 42/478 (8%)
Query: 163 YDQIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAI---AVATCFRDV 216
+++ P+ I+ + +Q G+ + +L H G +LADEMGLGKT+Q I A +RD
Sbjct: 182 FEESPSFIDGMMRAYQLQGLNWMVSLHHNGLNGILADEMGLGKTLQTISFLAYLKHYRDT 241
Query: 217 -WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P LI+ P S +WA +W P I+ L G+ I+SS R +P D
Sbjct: 242 SGPHLIVVPKSTLQNWAREFSRW--TPDFNIIT----LAGTKDERAEIISS---RLLPQD 292
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
I +Y++ L +++L +F+ ++ DE+H +KN + + + + LL++G
Sbjct: 293 FEVCITTYEMCLIEKSVLKKFSFEYIVIDEAHRIKNVDSILSQIVRAFTSRGR--LLITG 350
Query: 336 TPALSRPIELFKQLEALYPDV---YKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
TP + ELF L + P++ YK++ ++ ++ G + E LH +++
Sbjct: 351 TPLQNNLKELFALLNFICPEIFVDYKDLDDFLHKDSTGTDEEEEKSKKVVEALHKILRP- 409
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKIKACKSEEEVQ 450
++RR+K DV L K+ +++ ++E R+ Y L ++++ V G + + +
Sbjct: 410 FLLRRVKSDVEKNLLPKKEINIYVGLSEM-QRKWYRSVLEKDIDAVNGLTGKKEGKTRLM 468
Query: 451 SLKFTEKNLINKIYT-DSAEAKIP--------------AVLDYLETVIEA-GCKFLIFAH 494
++ + + Y D AE P +LD L + ++A G + LIF+
Sbjct: 469 NMVMQLRKVTCHPYLFDGAEPGPPYTTDEHLIQNSGKMMILDKLLSSMKAKGSRVLIFSQ 528
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLT 553
+LD + L ++ RIDGGT R + E+ + D K +L+ +AGG+G+
Sbjct: 529 MSRVLDILEDYCLFRQYKYCRIDGGTAHDDRILAIDEYNKPDSEKFIFLLTTRAGGLGIN 588
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
LT A V+ + W P +QA DRAHRIGQ V V+ + +V++ + + KL
Sbjct: 589 LTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITEGSVEERMLERAAQKL 646
>gi|395545881|ref|XP_003774825.1| PREDICTED: probable global transcription activator SNF2L1
[Sarcophilus harrisii]
Length = 1004
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 238/499 (47%), Gaps = 55/499 (11%)
Query: 162 KYDQIPAHIESKLL-PFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRD-- 215
+++ P++++ L +Q G+ + + ++G +LADEMGLGKT+Q I++ +
Sbjct: 110 RFETSPSYVKGGTLRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTISLLGYLKHYR 169
Query: 216 --VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
V P ++L P S +W + ++W +P + V ++ G + T + IP
Sbjct: 170 NVVGPHMVLVPKSTLHNWMSEFKRW--VPSIQAVCLI----GERETRATFIRDTI---IP 220
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK--KAQYAL 331
+ + SY++V+K + + N+ ++ DE+H +KN ++K + II+ K L
Sbjct: 221 GEWEVCVTSYEMVIKERALFKRFNWHYLVIDEAHRIKNEKSKLSE----IIREFKTTNRL 276
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
LL+GTP + EL+ L L PDV+ + ++ + + G + E LH ++K
Sbjct: 277 LLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTKNCLGDQKLV---ERLHAVLKP 333
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RR+K +V LP K+ +++L ++ K R+ Y L ++++++ K K +
Sbjct: 334 -FLLRRIKAEVERTLPPKKEVKIYLGLS-KMQREWYTRILMKDIDILNSVGKTDKMR--L 389
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFA 493
++ + N Y D AE P D L + E + LIF+
Sbjct: 390 LNILMQLRKCCNHPYLFDGAEPGPPYTTDAHIVNNSGKMVALDKLLAKLKEQESRVLIFS 449
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
+LD + + + R+DG TP R+ + F + K +LS +AGG+G+
Sbjct: 450 QMTRLLDILEDYCMWRGYEYCRLDGQTPHGEREEAIEVFNAPNSTKFIFMLSTRAGGLGI 509
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA DRAHRIGQ V V+ L+ ++TV+D + + KL
Sbjct: 510 NLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEDRIVERAEIKLR 569
Query: 613 ------NLGQVLDGHENSL 625
G++LD N L
Sbjct: 570 LDSIVIQQGRLLDQQSNKL 588
>gi|260494465|ref|ZP_05814595.1| LOW QUALITY PROTEIN: SWF/SNF family helicase [Fusobacterium sp.
3_1_33]
gi|260197627|gb|EEW95144.1| LOW QUALITY PROTEIN: SWF/SNF family helicase [Fusobacterium sp.
3_1_33]
Length = 683
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 144/499 (28%), Positives = 241/499 (48%), Gaps = 42/499 (8%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQH-----GGRILLADEMGLGKTIQAIAVATCF 213
+K ++IPA + L +Q GV + L+ GG +LAD+MGLGKT+Q I
Sbjct: 212 FEQKIEEIPAKYKKILREYQIVGVEWMLKLRSMNLGG--ILADDMGLGKTLQVITYLESV 269
Query: 214 RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
+ P LI+TP+SL L+W ++ + V +LS G +R + SN K +
Sbjct: 270 KRERPCLIITPASLILNWKNEFNKF-----NSSVSILSIYG--DRKNREDLLSNLKNEVI 322
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
I SYD + + ++ + F +I DE+ ++KN + K A I +++ L L
Sbjct: 323 ------ITSYDYLKRDIDLYENIEFDTIILDEAQYIKNHKTKAAQAVKKI--NSEFKLAL 374
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV 393
+GTP + E++ + L N + Y + V + + E L N+++ +
Sbjct: 375 TGTPLENSLAEIWSIFDFLMNGYLFNYDYFYKNYERAIVLQAEKNVT--ERLKNMVEPFI 432
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDV--AEKDMRQIYALFRELEVVKGKIKACKSEEEVQS 451
+ RRLKKDVL +LP K + F+++ EK++ Q L R E + I ++ EV +
Sbjct: 433 L-RRLKKDVLKELPEKIEETYFVEMNQEEKNLYQA-NLVRINETLAQSIDVNTNKIEVLA 490
Query: 452 LKFTEKNLI---NKIYTD--SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLF 506
+ + + +Y D S+ +KI A ++ ++ IE + L+F+ +LD + Q
Sbjct: 491 MLTKLRQICIDPRLLYEDISSSSSKINACIELIKKSIENKQRILLFSSFTTVLDLVAQEC 550
Query: 507 LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELS 566
+ + G T R LV +FQ + V ++S+KAGG GL LT AS VI +
Sbjct: 551 DNLSIPYFILTGETNKIKRNQLVEDFQ-NEAVPLFLISLKAGGTGLNLTKASVVIHLDPW 609
Query: 567 WTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
W QA DRAHRIGQ +V V+ L+ +T+++ + ++ K E ++ + S
Sbjct: 610 WNISAQNQATDRAHRIGQEDTVQVFNLITKNTIEEKILNLQNKKKELSDIFVENSKGSF- 668
Query: 627 VSSSQIRSSPAKQKTLDSF 645
SS K++ LD F
Sbjct: 669 -------SSLTKEELLDLF 680
>gi|153791718|ref|NP_001093467.1| probable global transcription activator SNF2L1 [Danio rerio]
Length = 1036
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 239/482 (49%), Gaps = 56/482 (11%)
Query: 162 KYDQIPAHIESKLL-PFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATC---FR 214
++++ P++I++ L +Q G+ + + ++G +LADEMGLGKT+Q IA+ +R
Sbjct: 130 RFEESPSYIKNGTLRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYR 189
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
++ P ++L P S +W ++W +P + V ++ R+ F R++
Sbjct: 190 NIPGPHMVLVPKSTLHNWMNEFKRW--VPTLKAVCLIG--NKDERAAFI-------RDVM 238
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
+ G +++ SY++V++ +++ N++ ++ DE+H +KN ++K + K L
Sbjct: 239 MPGEWDVCVTSYEMVIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIAREF--KTTNRL 296
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRY---CKGGVFGIYQGASNHEELHNL 388
LL+GTP + EL+ L L PDV+ + ++ + + C G + E LH +
Sbjct: 297 LLTGTPLQNNLHELWSLLNFLLPDVFNSASDFDSWFDTNCLGDQKLV-------ERLHAV 349
Query: 389 MKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSE 446
++ ++RR+K +V LP K+ +++L ++ K R+ Y L ++++++ K K
Sbjct: 350 LRP-FLLRRIKAEVEKSLPPKKEVKIYLGLS-KMQREWYTRILMKDIDILNSAGKMDKMR 407
Query: 447 EEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFL 490
+ ++ + N Y D AE P D L V E G + L
Sbjct: 408 --LLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLVINSGKMVALDKLLPKVQEQGSRVL 465
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGG 549
IF+ +LD + + + R+DG TP +R+ + F + K +LS +AGG
Sbjct: 466 IFSQMTRVLDILEDYCMWRGFEYCRLDGNTPHEAREQAIDAFNAPNSSKFIFMLSTRAGG 525
Query: 550 VGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRS 609
+G+ L A VI + W P +QA DRAHRIGQ V V+ L+ ++TV++ + +
Sbjct: 526 LGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQRKPVKVFRLITDNTVEERIVERAEM 585
Query: 610 KL 611
KL
Sbjct: 586 KL 587
>gi|299741616|ref|XP_001831930.2| transcription activator snf2l1 [Coprinopsis cinerea okayama7#130]
gi|298404796|gb|EAU89829.2| transcription activator snf2l1 [Coprinopsis cinerea okayama7#130]
Length = 1102
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 226/483 (46%), Gaps = 52/483 (10%)
Query: 163 YDQIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDV--- 216
++ P+ I + P+Q G+ + +L H G +LADEMGLGKT+Q I+ + + V
Sbjct: 129 FESSPSFINGTMRPYQLQGLNWMVSLHHNGLNGILADEMGLGKTLQTISFLSYLKHVRGI 188
Query: 217 -WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P L++ P S +WA ++W P V +L+ GS I+++ R +P D
Sbjct: 189 TGPHLVVVPKSTLQNWAREFEKWT---PDFNVALLT---GSKEERAEIIAT---RLLPQD 239
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
I SY++ L + L +F+ ++ DE+H +KN + + + + + LL++G
Sbjct: 240 FEVCITSYEICLIEKGALKKFSFEYIVIDEAHRIKNVDSILSQIVRSFMSRGR--LLITG 297
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE--------LHN 387
TP + ELF L + P+++ N + K GA N E+ LH
Sbjct: 298 TPLQNNLKELFALLNFICPEIFVNYADLDAFLHKDD-----SGAENEEDKSKKVVEALHK 352
Query: 388 LMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKIKACKS 445
+++ ++RR+K DV L K+ +++ ++E R+ Y L ++++ V G +
Sbjct: 353 ILRP-FLLRRVKSDVEKSLLPKKEINIYVGLSEM-QRKWYRSVLEKDIDAVNGLTGKKEG 410
Query: 446 EEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKF 489
+ + ++ + + Y D AE P D L+ + + G +
Sbjct: 411 KTRLMNIVMQLRKVTCHPYLFDGAEPGPPYTTDEHLIQNSGKMVILDKLLKMMYQKGSRV 470
Query: 490 LIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAAVLSMKAG 548
LIF+ +LD + L + RIDGGT R A + E+ + D +L+ +AG
Sbjct: 471 LIFSQMSRVLDILEDYCLFRGYKYCRIDGGTAHEDRIAAIDEYNKPGSDKFIFLLTTRAG 530
Query: 549 GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVR 608
G+G+ LT A V+ + W P +QA DRAHRIGQ V VY + +V++ + +
Sbjct: 531 GLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVYRFITEGSVEERMLERAA 590
Query: 609 SKL 611
KL
Sbjct: 591 QKL 593
>gi|149918387|ref|ZP_01906877.1| swf/snf family helicase [Plesiocystis pacifica SIR-1]
gi|149820687|gb|EDM80097.1| swf/snf family helicase [Plesiocystis pacifica SIR-1]
Length = 1385
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 222/467 (47%), Gaps = 31/467 (6%)
Query: 167 PAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
P ++L +QR+G + + G LAD+MGLGKT+QA+A+ P L++
Sbjct: 927 PRGFGAQLRDYQREGYEWMWRLAEAGLGACLADDMGLGKTVQALALLAQRASKGPALVVC 986
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
P+S+ +W A Q++ PS VL+ +R ++++ R++ + SY
Sbjct: 987 PTSVVHNWIAETQRF---APSLRPAVLAD--APDRE--ELLAAARSRDL------IVCSY 1033
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
+++ L F V+ DE+H LKN + KR A + A + L L+GTP +RP
Sbjct: 1034 GLLVSEAEALADLTFATVVFDEAHALKNERTKRAKAAREL--DASFRLGLTGTPVENRPA 1091
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVL 403
EL+ L P + ++ R+ K G + AS +L L+K ++RR K VL
Sbjct: 1092 ELWGLFRVLLPGLLGTRKQFDERFAKPIAQGEREAAS---QLRALLK-HFILRRTKAQVL 1147
Query: 404 AQLPVKRRQQVFLDVAEKDMRQIY--ALFRE-LEVVKGKIKACKSEEEVQSLKFTEKNLI 460
+LP R +V L++ Y AL R LE ++G + + + L + +
Sbjct: 1148 DELPP--RTEVTLEIEPTAKASAYYEALRRRALESLEGGEQHTQRVRILAELTRLRQAAV 1205
Query: 461 NKIYTDS---AEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRID 517
+ D A AKI A+ L ++ E G + L+F + + Q F + + +D
Sbjct: 1206 DPRLLDERGPAGAKIDALTRQLLSLREEGHRALVFTQFLGAMALMRQAFEAAGIEYLELD 1265
Query: 518 GGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
G TP A R V FQ + +LS++AGGVG+ LT A V+ + W P QA D
Sbjct: 1266 GATPAAERARRVDAFQAGEG-DVFMLSLRAGGVGMNLTGADYVLHLDPWWNPAVEDQATD 1324
Query: 578 RAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 624
RAHR+GQ V VY L++ T+++ + + K E +L G E +
Sbjct: 1325 RAHRLGQSRPVTVYRLVSKGTIEEKILALHAEKRELTDDLLFGLEGA 1371
>gi|407040391|gb|EKE40105.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
nuttalli P19]
Length = 1243
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 236/500 (47%), Gaps = 45/500 (9%)
Query: 138 EIENLHPLVQRAIASASAAPDLRE--KYDQIPAHIESKLLPFQRDGVR---FALQHGGRI 192
EIE H ++ + P R+ K+ + P +++KL +Q +GV +A +
Sbjct: 313 EIEKYHKRIKEWEEKKRSTPLPRKFIKFVEGP-EVKNKLRDYQIEGVNWITYAFSQNTNV 371
Query: 193 LLADEMGLGKTIQAIAVATCFRD----VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
+LADEMGLGKT+Q I D + P L++ P S +W+ +W P VV
Sbjct: 372 ILADEMGLGKTVQTITFIKHLYDNYNIIGPFLVIVPLSTISNWSKEFNKWA--PKLNCVV 429
Query: 249 VLSQLGGSNRSGF--TIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADES 306
G +R+ T + N K I + L + S+++V+K Q++ ++K + DE+
Sbjct: 430 YTGD--GESRAIIRKTEMFGNKKGTIKFNVL--LTSFELVIKDQDVFNQFHWKYTVVDEA 485
Query: 307 HFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNR 366
H LKN + + + + LL++GTP + EL+ L L+P + + E+
Sbjct: 486 HRLKNNEGQLYEVLMRTT--TENKLLITGTPLQNTLKELWSLLHFLHPKKFISFEEFEKT 543
Query: 367 YCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI 426
Y +G ++HN +K ++RR+KKDV LP K+ + + ++++ +Q
Sbjct: 544 YS-------VEGTEEINKIHNELKP-YLLRRMKKDVEKSLPPKKERILRVELS-PIQKQY 594
Query: 427 YA--LFRELEVVKGKIKACKSE-----EEVQSLKFTEKNLINKIYTDSAE-------AKI 472
Y + + + +K ++ K+ E++ L LIN++ E K+
Sbjct: 595 YRWIITKNSDALKKAVQQQKTSLMNICMELKKL-CNHPILINELMNSENEENLIQSCGKM 653
Query: 473 PAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
+ L + E G + LIF+ MLD + + + R+DG +RQ + F
Sbjct: 654 ILLDKLLVKLKETGHRVLIFSQMVRMLDVLSNYLHFRGFNYQRLDGAMGREARQRAMDHF 713
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
KD +LS +AGG+G+ LT A TVI + W P + +QA+ R HRIGQ +VN+Y
Sbjct: 714 NAKDSTDFVFLLSTRAGGLGINLTTADTVIIYDSDWNPQNDLQAQARCHRIGQEKTVNIY 773
Query: 592 YLLANDTVDDIVWDVVRSKL 611
L T+++ + + KL
Sbjct: 774 RLATEGTIEEKILLSAKKKL 793
>gi|336365224|gb|EGN93575.1| hypothetical protein SERLA73DRAFT_171912 [Serpula lacrymans var.
lacrymans S7.3]
gi|336377787|gb|EGO18947.1| hypothetical protein SERLADRAFT_453892 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1049
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 229/478 (47%), Gaps = 42/478 (8%)
Query: 163 YDQIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATC---FRDV 216
+++ P+ I + P+Q G+ + +L H G +LADEMGLGKT+Q I+ + +RD
Sbjct: 133 FEESPSFISGLMRPYQLQGLNWMVSLHHNGLNGILADEMGLGKTLQTISFLSYLKHYRDT 192
Query: 217 -WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P LI+ P S +WA ++W P VVVL+ G+ I+++ R IP D
Sbjct: 193 SGPHLIVVPKSTLQNWAREFERW---TPDVNVVVLT---GTKEERAEIIAN---RLIPQD 243
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
+ SY++ L ++ L +F+ ++ DE+H +KN + + + + + LL++G
Sbjct: 244 FEVCVTSYEICLIEKSALKKFSFEYIVIDEAHRIKNVDSILSQIVRSFLSRGR--LLITG 301
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNH---EELHNLMKAT 392
TP + ELF L + P+++ + + + K + ++ E LH +++
Sbjct: 302 TPLQNSLKELFALLNFICPEIFSDYADLDSFLHKDDEGAEGEEETSKKVVEALHKILRP- 360
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKIKACKSEEEVQ 450
++RR+K DV L K+ +++ + E R+ Y L ++++ V G + + +
Sbjct: 361 FLLRRVKSDVEKNLLPKKEINIYIGLTEM-QRKWYRSVLQKDIDAVNGLTGKKEGKTRLM 419
Query: 451 SLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAH 494
++ + + Y D AE P D L+++ G + LIF+
Sbjct: 420 NMVMQLRKVTCHPYLFDGAEPGPPYTTDEHIIENSGKMIILDKLLQSMQAKGSRVLIFSQ 479
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLT 553
+LD + L + RIDG T R + E+ + D K +L+ +AGG+G+
Sbjct: 480 MSRVLDILEDYCLFRSFKYCRIDGSTAHDDRIVAIDEYNKPDSEKFIFLLTTRAGGLGIN 539
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
LT A VI + W P +QA DRAHRIGQ V V+ + D+V++ + + KL
Sbjct: 540 LTTADIVILYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITEDSVEERMLERAAQKL 597
>gi|110800752|ref|YP_696312.1| Snf2/Rad54 family helicase [Clostridium perfringens ATCC 13124]
gi|110675399|gb|ABG84386.1| helicase, SNF2/RAD54 family [Clostridium perfringens ATCC 13124]
Length = 1084
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 238/506 (47%), Gaps = 64/506 (12%)
Query: 148 RAIASASAAPDLREKYD-------QIPAHIESKLLPFQRDGVRF--ALQH---GGRILLA 195
R I +L+ K+ ++P +++ L +Q+ G + L+H GG +L
Sbjct: 587 RYIKGKKKLNELKSKFKNINKLSFEVPKDLKANLREYQKFGYNWLKTLEHLGLGG--ILG 644
Query: 196 DEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG 255
DEMGLGKT+QAI + L++ P+SL +W +++ P+ +V VL++ G
Sbjct: 645 DEMGLGKTLQAITFILSNKGK-KTLVVAPTSLIYNWK---EEFNKFAPNLVVEVLNE-GK 699
Query: 256 SNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHF 308
R + L +I S DV++ N+L NF DE+
Sbjct: 700 DKRE---------------EALRDIESKDVIITTYNLLKRDLEEYKKINFDYCFIDEAQA 744
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
+KN ++ + A + ++Y L+GTP + +EL+ + + P + + RY
Sbjct: 745 IKNPDSQNSEAVKEV--NSEYKFALTGTPMENSLMELWSIFDFVMPGYLYDRKRFTVRYY 802
Query: 369 KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA 428
K + + E+H+L+K ++ RR KKDV+ +LP K + +D+ E D +++Y+
Sbjct: 803 KK----LNESEEVLNEIHSLIKPFIL-RRKKKDVIKELPDKIEKMHLVDLGE-DQKKVYS 856
Query: 429 LFRE------------LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVL 476
++ E K KI+ +++ L IN +SA KI A++
Sbjct: 857 IYANNALSIMEKKQDAEEFNKSKIEILSYITKLRQLALDPAVTINDYMGESA--KIEALV 914
Query: 477 DYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD 536
+ L IE G K L+F+ +L I ++K+ +DG R +V EF E +
Sbjct: 915 EILNQGIEEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGE 974
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN 596
+ ++S+KAGG GL LT+A VI + W P QA DRAHR+GQ + V V L+A
Sbjct: 975 N-SVFLISLKAGGTGLNLTSADIVIHFDPWWNPAVENQATDRAHRMGQKNVVEVIKLIAK 1033
Query: 597 DTVDDIVWDVVRSKLENLGQVLDGHE 622
T+++ V + K E + ++++ E
Sbjct: 1034 GTIEEKVVALQEEKKELISKIIEEGE 1059
>gi|373470493|ref|ZP_09561625.1| protein, SNF2 family [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371762504|gb|EHO51034.1| protein, SNF2 family [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 1130
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 230/493 (46%), Gaps = 45/493 (9%)
Query: 154 SAAPDLREKYDQI-------PAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLG 201
S+ L K+D I PA + L +Q++G ++ L GG +LAD+MGLG
Sbjct: 653 SSFAKLINKFDGIKSIDFTPPAEVIHILRGYQKEGFKWLRSVEELGFGG--ILADDMGLG 710
Query: 202 KTIQAIAV---ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNR 258
KT+Q I++ A + LI+ P+SL +W+ I ++ E+ V+ + G R
Sbjct: 711 KTLQIISLLIDAKQNGRLSKALIVCPASLVYNWSEEISKFDKDNLLEVSVLAA--GKEER 768
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
+ S + I SYD + + ++ F I DE+ F+KN
Sbjct: 769 QKYLEESEDVDVYIS--------SYDTLRRDISLYHDMKFSHQIIDEAQFIKNQNTGVAK 820
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
A + ++AL +GTP +R EL+ + + P + + + RY V G
Sbjct: 821 AVKAVKADVKFAL--TGTPIENRLSELWSIFDYIMPGFLYSYNAFRTRYENDIV---KTG 875
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKG 438
N ++ + M A ++RRLK +V LP K + + V+ D +Q A EL +K
Sbjct: 876 DENSAKILSKMIAPFVLRRLKSEVALDLPDKIEE---IRVSRFDKKQQLAYDGELSNLKK 932
Query: 439 KIKACKSEEEVQSLKFTEKNLINKIYTDSA---------EAKIPAVLDYLETVIEAGCKF 489
+ K + + +E + +I D + AK+ +D +++ IEAG K
Sbjct: 933 ILLGDKDYNSTKMIVLSEITKLRQICCDPSLIFENYVGESAKLETCIDLVKSGIEAGHKI 992
Query: 490 LIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGG 549
L+F+ MLD I + F ++K+ I G TP R LV F DD ++S+KAGG
Sbjct: 993 LLFSQFTSMLDIIGKRFEEEKITSYMITGATPKDKRLQLVNRFN-NDDTNVFLISLKAGG 1051
Query: 550 VGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRS 609
GL LT A VI + W QA DRAHRIGQ ++V VY L+A T+++ + + S
Sbjct: 1052 TGLNLTGADIVIHYDPWWNFAAQNQATDRAHRIGQKNTVTVYRLIAKGTIEEKIVKLQES 1111
Query: 610 KLENLGQVLDGHE 622
K + +VL+ E
Sbjct: 1112 KKDLADRVLNFEE 1124
>gi|350561110|ref|ZP_08929949.1| SNF2-related protein [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349781217|gb|EGZ35525.1| SNF2-related protein [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 1082
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 148/503 (29%), Positives = 240/503 (47%), Gaps = 48/503 (9%)
Query: 151 ASASAAPDLREKYDQIPAH---IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAI 207
A A A ++RE+ D H I ++L P+Q +GV F L GR LLAD+MGLGKT+QAI
Sbjct: 312 ARAVRAAEIRERIDTGGGHLPGIRARLHPYQAEGVAF-LAGRGRALLADDMGLGKTLQAI 370
Query: 208 AVATCFRD---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIV 264
A A R V VL++ P+SL+L WA I+++ + E+ VV G
Sbjct: 371 ASAYWMRQHDGVERVLVVCPASLKLQWAREIEKFTGL---EVQVV---------QGPVDT 418
Query: 265 SSNTKRNIPLDGLFNIISYDVVLK-LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPI 323
RN F++++Y++V++ L I + ++I DE+ +KN + K +A +
Sbjct: 419 RGAQYRN---PSPFHVVNYELVMRDLPVINDTLRPDLLILDEAQRIKNWRTKIASAVKRV 475
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE 383
+++YAL+L+GTP +R +L+ ++ + V + Y + G G N
Sbjct: 476 --QSRYALVLTGTPLENRLEDLYSLMQVIDSRVLGPLWRYLVDFHVTDDRGKVLGYRNLS 533
Query: 384 ELHNLMKATVMIRRLKKDVLAQLP---VKR-------RQQVFLDVAEKDMRQIYALFREL 433
EL ++ VM+RR + V QLP V+R Q+ + A K Q+ + R
Sbjct: 534 ELRRRLR-PVMLRRDRSLVRDQLPERIVQRIDVPMSGEQEGIHEAALKAAGQLAQIMRRR 592
Query: 434 EVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIE-----AGCK 488
+ + S + + L++K S + LD LET+++ AG K
Sbjct: 593 PLTPSEQNRMLSALQQARMACDAAGLVDKETEGSPK------LDELETLLDELCRSAGLK 646
Query: 489 FLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAG 548
++F+ + M + Q + + +R+ GG P R AL+ F++ D V+ LS AG
Sbjct: 647 AVVFSQWERMTEMAEQRVRRLGLGSVRLHGGVPTQKRGALMDRFRDDDAVQV-FLSTDAG 705
Query: 549 GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVR 608
GVGL L A+ +I ++ W P L Q R HR+GQ V L+A + ++ V +V
Sbjct: 706 GVGLNLQNAAVLINLDIPWNPAVLDQRIARVHRLGQKQKVQAILLVAPGSYEERVLGLVE 765
Query: 609 SKLENLGQVLDGHENSLEVSSSQ 631
K + V+D VS S+
Sbjct: 766 GKRQLFDNVVDPEATEEVVSVSR 788
>gi|110801800|ref|YP_698913.1| Snf2/Rad54 family helicase [Clostridium perfringens SM101]
gi|110682301|gb|ABG85671.1| helicase, SNF2/RAD54 family [Clostridium perfringens SM101]
Length = 1084
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 232/482 (48%), Gaps = 57/482 (11%)
Query: 165 QIPAHIESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATCFRDVWPV 219
++P ++++L +Q+ G + L+H GG +L DEMGLGKT+QAI +
Sbjct: 611 EVPKDLKAELREYQKFGYNWLKTLEHLGLGG--ILGDEMGLGKTLQAITFILSNKGK-KT 667
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
LI+ P+SL +W +++ P+ +V VL++ G R + L +
Sbjct: 668 LIVAPTSLIYNWK---EEFNKFAPNLVVEVLNE-GKDKRE---------------EALRD 708
Query: 280 IISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
I S DV++ N+L NF DE+ +KN ++ + A + ++Y
Sbjct: 709 IESKDVIITTYNLLKRDLEEYKKINFDYCFIDEAQAIKNPDSQNSEAVKEV--NSEYKFA 766
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
L+GTP + +EL+ + + P + + RY K + + E+H+L+K
Sbjct: 767 LTGTPMENSLMELWSIFDFVMPGYLYDRKRFTVRYYKK----LNESGEVLNEIHSLIKPF 822
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE------------LEVVKGKI 440
++ RR KKDV+ +LP K + +D+ E + +++Y+++ E K KI
Sbjct: 823 IL-RRKKKDVIKELPDKIEKMHLVDLGE-EQKKVYSIYANNALSIMEKKQDAEEFNKSKI 880
Query: 441 KACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLD 500
+ +++ L IN +SA KI A+++ L IE G K L+F+ +L
Sbjct: 881 EILSYITKLRQLALDPSVTINDYMGESA--KIEALVEILNQGIEEGHKILVFSQFTSVLK 938
Query: 501 AIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTV 560
I ++K+ +DG R +V EF E ++ ++S+KAGG GL LT+A V
Sbjct: 939 NISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGEN-SVFLISLKAGGTGLNLTSADIV 997
Query: 561 IFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
I + W P QA DRAHR+GQ + V V L+A T+++ V + K E + ++++
Sbjct: 998 IHFDPWWNPAVENQATDRAHRMGQKNVVEVIKLIAKGTIEEKVVALQEEKKELISKIIEE 1057
Query: 621 HE 622
E
Sbjct: 1058 GE 1059
>gi|115727572|ref|XP_788696.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 isoform 2
[Strongylocentrotus purpuratus]
gi|390338037|ref|XP_003724706.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5
[Strongylocentrotus purpuratus]
Length = 1019
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 240/480 (50%), Gaps = 51/480 (10%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAV---ATCFR 214
++++ P +I++ ++ +Q G+ + + +HG +LADEMGLGKT+Q I++ +R
Sbjct: 124 QFEESPKYIKNGEMRDYQVRGLNWLISLYEHGINGILADEMGLGKTLQTISLLGYMKHYR 183
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-RSGFTIVSSNTKRNI 272
+ P LI+ P S +W A ++W PS V L +G + RS F R++
Sbjct: 184 HIPSPHLIICPKSTLANWMAECERWC---PSLRAVCL--IGNQDQRSAFI-------RDV 231
Query: 273 PLDGLFN--IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
+ G ++ I SY++ ++ +++ N++ ++ DE+H +KN ++K + K
Sbjct: 232 MMPGEWDVCITSYEMAIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF--KTTNR 289
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
LLL+GTP + EL+ L L PDV+ + ++ + G S LH +++
Sbjct: 290 LLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDAWFSTQDCLG---DNSLVTRLHAVLR 346
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
++RRLK +V L K+ ++++ ++ R+ Y L ++++VV G K+ K
Sbjct: 347 P-FLLRRLKSEVEKALLPKKETKMYVGMSIM-QREWYTKILMKDIDVVNGAGKSDKMR-- 402
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLIF 492
+ ++ + N Y D AE P +VLD L + E G + LIF
Sbjct: 403 LMNILMHLRKCGNHPYLFDGAEPGPPYTTDKHLVENSGKMSVLDKLLPKLKEQGSRVLIF 462
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVG 551
+ +LD + + + + R+DG TP A RQ + F D K +LS +AGG+G
Sbjct: 463 SQMTRLLDILEDYCVWRGHNYCRLDGQTPHAERQESINNFNMPDSEKFVFLLSTRAGGLG 522
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ L A V+ + W P +QA DRAHRIGQ V+V+ ++ +TV++ + + KL
Sbjct: 523 INLATADIVVLYDSDWNPQVDLQAMDRAHRIGQKKQVHVFRFISENTVEERIVERAEMKL 582
>gi|295102130|emb|CBK99675.1| Superfamily II DNA/RNA helicases, SNF2 family [Faecalibacterium
prausnitzii L2-6]
Length = 1109
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 220/457 (48%), Gaps = 34/457 (7%)
Query: 167 PAHIESKLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRD---VWPVL 220
P ++ L +QRDG R+ +G +LAD+MGLGKT+Q ++ + P L
Sbjct: 642 PVSLQKTLRKYQRDGYRWLRTLDGYGMGGILADDMGLGKTVQVLSYLLAMKQNGQTLPSL 701
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
I+ P+SL L+WA Q++ P VVV G + + P L +
Sbjct: 702 IVCPASLVLNWAEECQKF--TPELSCVVV---------DGDAAHRAELAESWPAADLV-V 749
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
SYD++ + + + F I DE+ +KN ++ A + + ++AL +GTP +
Sbjct: 750 TSYDLLRRDEALYEGQEFYACILDEAQAIKNHTTQKYKAVCKVRSRVRFAL--TGTPVEN 807
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKK 400
R EL+ L P + +R+ K V Q A N + ++RR+K
Sbjct: 808 RLGELWSIFSFLMPGYLPPYKSFCSRFEKPIVQEEDQTAVRR---LNQLTGPFILRRMKS 864
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQS----LKFTE 456
DVL +LP K + V+ E++ R++Y + + K++A K E+++ ++ E
Sbjct: 865 DVLKELPPKT-ENVYRIELEEEQRKLY--LAAVVDAREKLQAAKPEDKMAVFAVLMRLRE 921
Query: 457 KNLINKIYTDSAE---AKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHC 513
++ D+ E AK+ A + + + +E G + L+F+ ML+ + + + +
Sbjct: 922 ICCDPRLIADNWEGGSAKLDACAELVSSAVEGGHRILLFSQFTSMLELLAKRLDAEGISH 981
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
+ G TP R LV F +V ++S++AGG GL LTAA VI + W
Sbjct: 982 FTLQGSTPKPVRAELVRRFN-GGEVSVFLISLRAGGTGLNLTAADIVIHYDPWWNVAAQN 1040
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
QA DRA+RIGQ + V VY L+A DT+++ + ++ ++K
Sbjct: 1041 QATDRAYRIGQQNPVQVYKLIAQDTIEEKIVELQQAK 1077
>gi|168209303|ref|ZP_02634928.1| helicase, SNF2/RAD54 family [Clostridium perfringens B str. ATCC
3626]
gi|170712526|gb|EDT24708.1| helicase, SNF2/RAD54 family [Clostridium perfringens B str. ATCC
3626]
Length = 1084
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 238/506 (47%), Gaps = 64/506 (12%)
Query: 148 RAIASASAAPDLREKYD-------QIPAHIESKLLPFQRDGVRF--ALQH---GGRILLA 195
R I +L+ K+ ++P +++ L +Q+ G + L+H GG +L
Sbjct: 587 RYIKGKKKLNELKSKFKNINKLSFEVPKDLKANLREYQKFGYNWLKTLEHLGLGG--ILG 644
Query: 196 DEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG 255
DEMGLGKT+QAI + L++ P+SL +W +++ P+ +V VL++ G
Sbjct: 645 DEMGLGKTLQAITFILSNKGK-KTLVVAPTSLIYNWK---EEFNKFAPNLVVEVLNE-GK 699
Query: 256 SNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHF 308
R + L +I S DV++ N+L NF DE+
Sbjct: 700 DKRE---------------EALRDIESKDVIITTYNLLKRDLEEYKKINFDYCFIDEAQA 744
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
+KN ++ + A + ++Y L+GTP + +EL+ + + P + + RY
Sbjct: 745 IKNPDSQNSEAVKEV--NSEYKFALTGTPMENSLMELWSIFDFVMPGYLYDRKRFTVRYY 802
Query: 369 KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA 428
K + + E+H+L+K ++ RR KKDV+ +LP K + +D+ E D +++Y+
Sbjct: 803 KK----LNESEEVLNEIHSLIKPFIL-RRKKKDVIKELPDKIEKMHLVDLGE-DQKKVYS 856
Query: 429 LFRE------------LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVL 476
++ E K KI+ +++ L IN +SA KI A++
Sbjct: 857 IYANNALSIMEKKQDAEEFNKSKIEILSYITKLRQLALDPAVTINDYMGESA--KIEALV 914
Query: 477 DYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD 536
+ L IE G K L+F+ +L I ++K+ +DG R +V EF E +
Sbjct: 915 EILNQGIEEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGE 974
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN 596
+ ++S+KAGG GL LT+A VI + W P QA DRAHR+GQ + V V L+A
Sbjct: 975 N-SVFLISLKAGGTGLNLTSADIVIHFDPWWNPAVENQATDRAHRMGQKNVVEVIKLIAK 1033
Query: 597 DTVDDIVWDVVRSKLENLGQVLDGHE 622
T+++ V + K E + ++++ E
Sbjct: 1034 GTIEEKVVALQEEKKELISKIIEEGE 1059
>gi|410989351|ref|XP_004000925.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Felis catus]
Length = 1061
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 231/471 (49%), Gaps = 53/471 (11%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 202 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWV--- 258
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 259 PS--VRVICFVGDKDARAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 309
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 310 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 367
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 368 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 423
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 424 -KMQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 480
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 481 DEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTP 540
Query: 522 PASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAH
Sbjct: 541 HEEREEAIEAFNVPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 600
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
RIGQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 601 RIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 651
>gi|395848673|ref|XP_003796973.1| PREDICTED: probable global transcription activator SNF2L1 isoform 1
[Otolemur garnettii]
Length = 1042
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 230/471 (48%), Gaps = 53/471 (11%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 199 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWV--- 255
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 256 PSLRVICF--VGDKDARAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 306
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 307 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 364
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 365 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEVKIYLGLS 420
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 421 -KMQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 477
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 478 DEHIVTNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTP 537
Query: 522 PASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAH
Sbjct: 538 HEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 597
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
RIGQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 598 RIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 648
>gi|194271429|gb|ACF37172.1| SNF2LT [Homo sapiens]
Length = 776
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 243/498 (48%), Gaps = 53/498 (10%)
Query: 162 KYDQIPAHIESK-LLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATC---FR 214
+++ P++++ L +Q G+ + + ++G +LADEMGLGKT+Q IA+ +R
Sbjct: 170 RFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYR 229
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-RSGFTIVSSNTKRNI 272
++ P ++L P S +W ++W+ PS V+ +G + R+ F +
Sbjct: 230 NIPGPHMVLVPKSTLHNWMNEFKRWV---PSLRVICF--VGDKDARAAFI-----RDEMV 279
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
P + + SY++V+K +++ +++ ++ DE+H +KN ++K + K+ LL
Sbjct: 280 PGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF--KSTNRLL 337
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
L+GTP + EL+ L L PDV+ + ++ + + G + E LH ++K
Sbjct: 338 LTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV---ERLHAVLKP- 393
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEVQ 450
++RR+K DV LP K+ +++L ++ K R+ Y L ++++V+ K K +
Sbjct: 394 FLLRRIKTDVEKSLPPKKEIKIYLGLS-KMQREWYTKILMKDIDVLNSSGKMDKMR--LL 450
Query: 451 SLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAH 494
++ + N Y D AE P D L + E G + LIF+
Sbjct: 451 NILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQ 510
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLT 553
+LD + + + R+DG TP R+ + F + K +LS +AGG+G+
Sbjct: 511 MTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGIN 570
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE- 612
L +A VI + W+P +QA DRAHRIGQ V V+ L+ ++TV++ + + KL
Sbjct: 571 LASADVVILYDSDWSPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRL 630
Query: 613 -----NLGQVLDGHENSL 625
G+++D N L
Sbjct: 631 DSIVIQQGRLIDQQSNKL 648
>gi|289765340|ref|ZP_06524718.1| SWF/SNF family helicase [Fusobacterium sp. D11]
gi|289716895|gb|EFD80907.1| SWF/SNF family helicase [Fusobacterium sp. D11]
Length = 1088
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 136/467 (29%), Positives = 229/467 (49%), Gaps = 36/467 (7%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQH-----GGRILLADEMGLGKTIQAIAVATCF 213
+K ++IPA + L +Q GV + L+ GG +LAD+MGLGKT+Q I
Sbjct: 617 FEQKIEEIPAKYKKILREYQIVGVEWMLKLRSMNLGG--ILADDMGLGKTLQVITYLESV 674
Query: 214 RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
+ P LI+TP+SL L+W ++ + V +LS G +R + SN K +
Sbjct: 675 KRERPCLIITPASLILNWENEFNKF-----NSSVSILSIYG--DRKNREDLLSNLKNEVV 727
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
+ +N + D+ L +NI F +I DE+ ++KN + K A I +++ L L
Sbjct: 728 ITS-YNYLKRDIDL-YENI----EFDTIILDEAQYIKNHKTKAAQAVKKI--NSEFKLAL 779
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV 393
+GTP + E++ + L N + Y + V + + E L N+++ +
Sbjct: 780 TGTPLENSLAEIWSIFDFLMNGYLFNYDYFYKNYERAIVLQAEKNVT--ERLKNMVEPFI 837
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDV--AEKDMRQIY------ALFRELEVVKGKIKACKS 445
+ RRLKKDVL +LP K + F+++ EK++ Q L + ++V KI+
Sbjct: 838 L-RRLKKDVLKELPEKIEETYFVEMNQEEKNLYQANLVKINETLAQSIDVNTNKIEVLAM 896
Query: 446 EEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQL 505
+++ + + L I S+ +KI A ++ ++ IE + L+F+ +LD + Q
Sbjct: 897 LTKLRQICIDPRLLYEDI--SSSSSKINACIELIKKSIENKQRILLFSSFTTVLDLVAQE 954
Query: 506 FLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAEL 565
+ + G T R LV +FQ + V ++S+KAGG GL LT AS VI +
Sbjct: 955 CDNLSIPYFMLTGETNKVKRNQLVEDFQ-NEAVPLFLISLKAGGTGLNLTKASVVIHLDP 1013
Query: 566 SWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
W QA DRAHRIGQ +V V+ L+ +T+++ + ++ K E
Sbjct: 1014 WWNISAQNQATDRAHRIGQEDTVQVFNLITKNTIEEKILNLQNKKKE 1060
>gi|288802766|ref|ZP_06408204.1| SNF2/helicase domain protein [Prevotella melaninogenica D18]
gi|288334916|gb|EFC73353.1| SNF2/helicase domain protein [Prevotella melaninogenica D18]
Length = 1343
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 246/495 (49%), Gaps = 40/495 (8%)
Query: 140 ENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQ---HGGRILLAD 196
E + L QR A + P +P ++++L +Q +G + + G + LAD
Sbjct: 863 ETMDALRQRIEACSKKIP-------VVPKTLQAQLRDYQEEGFEWMSRLTAWGAGVCLAD 915
Query: 197 EMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGS 256
+MGLGKT+Q IA+ + LI+ PSS+ +W +Q++ P+ + +L+Q
Sbjct: 916 DMGLGKTVQTIALLLEQSENGASLIVAPSSVVPNWRNELQRF---APTLNLTILNQ--SE 970
Query: 257 NRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKR 316
+RS + I GL NI Q+ L + +V DE+H +KNA K
Sbjct: 971 DRSKDIKEAKAGDVIITTYGLLNI--------QQDDLTGREWNVVCLDEAHTIKNANTKM 1022
Query: 317 TAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC---KGGVF 373
+ A + + KAQ+ ++L+GTP + EL+ + + P + + ++ ++ +G
Sbjct: 1023 SKAAMLL--KAQHKVILTGTPIQNHLAELWNLFQFINPGLLGSAEQFRKKFILPIEGD-- 1078
Query: 374 GIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL 433
+ +L L+ + ++RR K +V+ +LP K ++ ++++ ++M RE
Sbjct: 1079 ---NDKARQSQLRRLI-SPFLLRRTKAEVIDELPAKNEIKLPVELSSEEMAMYEVKRRET 1134
Query: 434 E--VVKGKIKACKSEEEVQSLK--FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKF 489
E +++ K + E+ L+ +L++K + + +K+ A +D E++ ++G +
Sbjct: 1135 EAKILENKADKVSTLAEITHLRQMACSCSLVDKRWKLPS-SKVLAFIDLAESLNDSGNRA 1193
Query: 490 LIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGG 549
L+F+ + I + K+ + +DG TP + R+ LV EFQ ++S+KAGG
Sbjct: 1194 LVFSQFTSFFEEIKKAMETAKLPYLYLDGSTPMSMREKLVKEFQS-GKCPFFLISLKAGG 1252
Query: 550 VGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRS 609
+GL LT A+ VI + W P QA DRA+RIGQ V VY L++ T+++ + + ++
Sbjct: 1253 LGLNLTGANYVIHLDPWWNPAIEQQATDRAYRIGQKQDVTVYRLISQHTIEEKILRLHKT 1312
Query: 610 KLENLGQVLDGHENS 624
K +L+G + S
Sbjct: 1313 KRNLSDSLLEGSDIS 1327
>gi|422874546|ref|ZP_16921031.1| Snf2/Rad54 family helicase [Clostridium perfringens F262]
gi|380304619|gb|EIA16907.1| Snf2/Rad54 family helicase [Clostridium perfringens F262]
Length = 1084
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 238/506 (47%), Gaps = 64/506 (12%)
Query: 148 RAIASASAAPDLREKYD-------QIPAHIESKLLPFQRDGVRF--ALQH---GGRILLA 195
R I +L+ K+ ++P +++ L +Q+ G + L+H GG +L
Sbjct: 587 RYIKGKKKLNELKSKFKNINKLSFEVPKDLKANLREYQKFGYNWFKTLEHLGLGG--ILG 644
Query: 196 DEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG 255
DEMGLGKT+QAI + L++ P+SL +W +++ P+ +V VL++ G
Sbjct: 645 DEMGLGKTLQAITFILSNKGK-KTLVVAPTSLIYNWK---EEFNKFAPNLVVEVLNE-GK 699
Query: 256 SNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHF 308
R + L +I S DV++ N+L NF DE+
Sbjct: 700 DKRE---------------EALRDIESKDVIITTYNLLKRDLEEYKKINFDYCFIDEAQA 744
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
+KN ++ + A + ++Y L+GTP + +EL+ + + P + + RY
Sbjct: 745 IKNPDSQNSEAVKEV--NSEYKFALTGTPMENSLMELWSIFDFVMPGYLYDRKRFTVRYY 802
Query: 369 KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA 428
K + + E+H+L+K ++ RR KKDV+ +LP K + +D+ E D +++Y+
Sbjct: 803 KK----LNESEEVLNEIHSLIKPFIL-RRKKKDVIKELPDKIEKMHLVDLGE-DQKKVYS 856
Query: 429 LFRE------------LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVL 476
++ E K KI+ +++ L IN +SA KI A++
Sbjct: 857 IYANNALSIMEKKQDAEEFNKSKIEILSYITKLRQLALDPAVTINDYMGESA--KIEALV 914
Query: 477 DYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD 536
+ L IE G K L+F+ +L I ++K+ +DG R +V EF E +
Sbjct: 915 EILNQGIEEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGE 974
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN 596
+ ++S+KAGG GL LT+A VI + W P QA DRAHR+GQ + V V L+A
Sbjct: 975 N-SVFLISLKAGGTGLNLTSADIVIHFDPWWNPAVENQATDRAHRMGQKNVVEVIKLIAK 1033
Query: 597 DTVDDIVWDVVRSKLENLGQVLDGHE 622
T+++ V + K E + ++++ E
Sbjct: 1034 GTIEEKVVALQEEKKELISKIIEEGE 1059
>gi|427721070|ref|YP_007069064.1| SNF2-like protein [Calothrix sp. PCC 7507]
gi|427353506|gb|AFY36230.1| SNF2-related protein [Calothrix sp. PCC 7507]
Length = 1416
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 232/486 (47%), Gaps = 36/486 (7%)
Query: 165 QIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
++P+ +++L +Q +G + L H G LAD+MGLGKT+QA+AV P LI
Sbjct: 943 ELPSTFQAELRDYQMEGFSWLARLAHWGVGACLADQMGLGKTVQALAVILRNAQSGPTLI 1002
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRN--IPLDGLFN 279
+ P+S+ ++W + Q++ P I+ Q GGS R S N P D L
Sbjct: 1003 VAPTSVCMNWVSEAQRF--APTLNII----QFGGSVREASPTASRQQLLNNLQPFDML-- 1054
Query: 280 IISYDVVLK--LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
+ SY ++ + + +L ++ ++ DE+ +KN KR+ A + + K + L+ +GTP
Sbjct: 1055 VCSYGLLQQEEVSQMLSQVQWQTIVLDEAQAIKNMTTKRSQAAMNL--KGSFKLITTGTP 1112
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV---M 394
+ EL+ + P + + + R F I +++ N +K + +
Sbjct: 1113 IENHLGELWNLFRFINPGLLGSFESFNQR------FAIPIEKFQDKQVRNKLKKLIQPFL 1166
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVK----GKIKACKSEEEVQ 450
+RRLK VL +LP + + ++++ ++M Y R + K G K + +
Sbjct: 1167 LRRLKNQVLEELPSRTEILLHVELSREEM-AFYEALRHEAISKLTESGATAGHKHLQVLA 1225
Query: 451 SLKFTEKNLINKIY----TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLF 506
+ + N T+ + +K+ + L ++E K L+F+ L I
Sbjct: 1226 EIMRLRRACCNPSLVMPDTELSSSKLQLFAEVLGDLLENHHKALVFSQFVDHLHIIRDYL 1285
Query: 507 LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELS 566
K+ ++ +DG TP R+ V FQ ++S+KAGG GL LTAA VI +
Sbjct: 1286 DKQGINYQYLDGSTPAPERKKRVDAFQAGSG-DVFLISLKAGGTGLNLTAADYVIHMDPW 1344
Query: 567 WTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
W P QA DRAHRIGQ V +Y L+A DT++D + D+ + K + +L+G + S +
Sbjct: 1345 WNPAVEDQASDRAHRIGQQRPVTIYRLVAKDTIEDKIVDLHQHKRDLADSLLEGTDISGK 1404
Query: 627 VSSSQI 632
+S+ +
Sbjct: 1405 ISTEAL 1410
>gi|409084088|gb|EKM84445.1| hypothetical protein AGABI1DRAFT_97308 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1068
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 231/478 (48%), Gaps = 42/478 (8%)
Query: 163 YDQIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAI---AVATCFRDV 216
+++ P+ I+ + +Q G+ + +L H G +LADEMGLGKT+Q I A +RD
Sbjct: 156 FEESPSFIDGMMRAYQLQGLNWMVSLHHNGLNGILADEMGLGKTLQTISFLAYLKHYRDT 215
Query: 217 -WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P LI+ P S +WA +W P I+ L G+ I+SS R +P D
Sbjct: 216 SGPHLIVVPKSTLQNWAREFSRW--TPDFNIIT----LAGTKDERAEIISS---RLLPQD 266
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
I +Y++ L +++L +F+ ++ DE+H +KN + + + + LL++G
Sbjct: 267 FEVCITTYEMCLIEKSVLKKFSFEYIVIDEAHRIKNVDSILSQIVRAFTSRGR--LLITG 324
Query: 336 TPALSRPIELFKQLEALYPDV---YKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
TP + ELF L + P++ YK++ ++ ++ G + E LH +++
Sbjct: 325 TPLQNNLKELFALLNFICPEIFVDYKDLDDFLHKDSTGTDEEEEKSKKVVEALHKILRP- 383
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKIKACKSEEEVQ 450
++RR+K DV L K+ +++ ++E R+ Y L ++++ V G + + +
Sbjct: 384 FLLRRVKSDVEKNLLPKKEINIYVGLSEM-QRKWYRSVLEKDIDAVNGLTGKKEGKTRLM 442
Query: 451 SLKFTEKNLINKIYT-DSAEAKIP--------------AVLDYLETVIEA-GCKFLIFAH 494
++ + + Y D AE P +LD L + + A G + LIF+
Sbjct: 443 NMVMQLRKVTCHPYLFDGAEPGPPYTTDEHLIQNSGKMMILDKLLSSMNAKGSRVLIFSQ 502
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLT 553
+LD + L ++ RIDGGT R + E+ + D K +L+ +AGG+G+
Sbjct: 503 MSRVLDILEDYCLFRQYKYCRIDGGTAHDDRILAIDEYNKPDSEKFIFLLTTRAGGLGIN 562
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
LT A V+ + W P +QA DRAHRIGQ V V+ + +V++ + + KL
Sbjct: 563 LTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITEGSVEERMLERAAQKL 620
>gi|421268781|ref|ZP_15719650.1| helicase conserved C-terminal domain protein [Streptococcus
pneumoniae SPAR95]
gi|395869035|gb|EJG80151.1| helicase conserved C-terminal domain protein [Streptococcus
pneumoniae SPAR95]
Length = 1048
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 227/493 (46%), Gaps = 60/493 (12%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FR 214
E++D P +++KL +Q++GV++ L H GG +LAD+MGLGKT+Q I + +
Sbjct: 590 EEFDIKPYEVKAKLRSYQKEGVKWLSMLDHYHFGG--ILADDMGLGKTLQTITLLEANLK 647
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKR--NI 272
LIL P+SL +W +++ +P ++ V S T+R I
Sbjct: 648 PDQKALILAPASLLYNWKEEFRKF--VPHKQVEVA--------------YGSKTERIKQI 691
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
I SY ++ +I DE+ +KN+Q K A K YAL
Sbjct: 692 EKSATITITSYPSFRSDLEHYQKQSYDYLILDEAQMIKNSQTKTAQALREFDVKTCYAL- 750
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
SGTP +R E++ + + P + + E+ +L +
Sbjct: 751 -SGTPIENRLEEIWSIFQIVLPGLLPSKKEFSKL---------------SPQLVAKLIQP 794
Query: 393 VMIRRLKKDVLAQLP----------VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKA 442
++RR K +VL +LP + Q+ + M+++ + E+ + KI+
Sbjct: 795 FVLRRKKDEVLTELPELSEHLYSNELSSSQKTLYLAQLRRMQEMVSGASAYEIKRHKIEI 854
Query: 443 CKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAI 502
++ + T + DS K+ ++ + L+T+ E G + LIF+ ML+ I
Sbjct: 855 LAGLTRLRQICNTPALFLEDYKGDSG--KMDSLFELLDTIREKGSRPLIFSQFTSMLNLI 912
Query: 503 HQLFLKKKVHCIRIDGGTPPASRQALVTEFQ--EKDDVKAAVLSMKAGGVGLTLTAASTV 560
Q KK++ +I G TP RQ +V F EKD ++S+KAGG GL LT A TV
Sbjct: 913 EQELEKKEMSHFKITGQTPSDKRQEMVNLFNQGEKD---CFLISLKAGGTGLNLTGADTV 969
Query: 561 IFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
I +L W P +QA R+HR+GQ V+VY L+ T+++ + ++ SK E VL+G
Sbjct: 970 ILCDLWWNPAVEMQAIGRSHRLGQTKQVDVYRLITLGTIEEKIQELQESKKELFNTVLEG 1029
Query: 621 HENSLEVSSSQIR 633
E+ +S I+
Sbjct: 1030 QESRSNLSVDDIK 1042
>gi|348524410|ref|XP_003449716.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Oreochromis
niloticus]
Length = 1036
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 242/501 (48%), Gaps = 59/501 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAV---ATCFR 214
++D+ P+++++ K+ +Q G+ + + ++G +LADEMGLGKT+Q IA+ +R
Sbjct: 150 RFDESPSYVKTGKMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTIALLGYMKHYR 209
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
++ P ++L P S +W ++W+ PS V L +G + I R++
Sbjct: 210 NIPGPHMVLVPKSTLYNWMNEFKRWV---PSLRAVCL--IGDRDERTALI------RDVL 258
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
L G +++ SY++++ + + N++ ++ DE+H +KN ++K + K L
Sbjct: 259 LPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF--KTTNRL 316
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
LL+GTP + EL+ L L PDV+ + ++ + + G + E LH +++
Sbjct: 317 LLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLV---ERLHTVLRP 373
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK--GKIKACKSEE 447
++RR+K DV L K+ ++++ ++ K R+ Y L ++++++ GK+ +
Sbjct: 374 -FLLRRIKADVEKTLLPKKEIKIYVGLS-KMQREWYTKILMKDIDILNSAGKMDKMRLLN 431
Query: 448 EVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLI 491
+ L+ N Y D AE P D L + E G + LI
Sbjct: 432 VLMQLR----KCCNHPYLFDGAEPGPPYTTDIHLAVNSGKMVVLDKLLPKLKEQGSRVLI 487
Query: 492 FAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGV 550
F+ MLD + + + R+DG TP RQ + F E + K +LS +AGG+
Sbjct: 488 FSQMTRMLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSKFIFMLSTRAGGL 547
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
G+ L A VI + W P +QA DRAHRIGQ V V+ + +TV++ + + K
Sbjct: 548 GINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVEERIVERAEMK 607
Query: 611 LE------NLGQVLDGHENSL 625
L G+++D N L
Sbjct: 608 LRLDSIVIQQGRLVDPSANKL 628
>gi|170572145|ref|XP_001891999.1| Potential global transcription activator SNF2L [Brugia malayi]
gi|158603134|gb|EDP39180.1| Potential global transcription activator SNF2L, putative [Brugia
malayi]
Length = 1024
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 234/479 (48%), Gaps = 50/479 (10%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDV- 216
++++ P +IE+ ++ +Q G+ + +LQH G +LADEMGLGKT+Q +AV +
Sbjct: 154 RFEKTPFYIENGEMRDYQIRGLNWLISLQHNGINGILADEMGLGKTLQTVAVIGFMKHYK 213
Query: 217 ---WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P L++ P S +W +W PS + L G ++ RN
Sbjct: 214 NASGPHLVIAPKSTLQNWINEFGKWC---PSLKAIALI--------GIAEARADLIRNEI 262
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
L G ++++ SY++VLK +++L ++ ++ DE+H +KN +K + K+++ L
Sbjct: 263 LPGKWDVLVTSYEMVLKEKSLLRKYVWQYLVIDEAHRIKNEHSKLSEIVREF--KSKHRL 320
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PD++ ++ + + + G + LH ++K
Sbjct: 321 LITGTPLQNNLHELWALLNFLLPDMFALASDF-DSWFTNDMMGNQDLVAR---LHKVLKP 376
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK DV L K+ ++++ ++ K R+ Y L ++++VV G K K+ +
Sbjct: 377 -FLLRRLKSDVEKTLLPKKEVKIYVGLS-KMQREWYTRILMKDIDVVNGAGKLEKAR--I 432
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFA 493
++ + N Y D AE P D L + G + LIF+
Sbjct: 433 MNILMHLRKCCNHPYLFDGAEPGPPYTTDQHLVDNSGKMVLLDKLLVKLKAQGSRVLIFS 492
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + + R+DG T RQ + EF + D K +L+ +AGG+G+
Sbjct: 493 SMSRMLDLLEDYCWWRGYRYCRLDGQTVHDERQKSIDEFNKPDSDKFIFMLTTRAGGLGI 552
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
LTAA VI + W P +QA DRAHRIGQ V V+ + ++TVD+ + + KL
Sbjct: 553 NLTAADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNTVDERIIERAEMKL 611
>gi|410633135|ref|ZP_11343782.1| helicase [Glaciecola arctica BSs20135]
gi|410147304|dbj|GAC20649.1| helicase [Glaciecola arctica BSs20135]
Length = 1425
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 145/486 (29%), Positives = 239/486 (49%), Gaps = 43/486 (8%)
Query: 165 QIPAHIESKLLPFQRDGVRFA--LQH-GGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
QIP+ +++L +Q G +A L H G LAD+MGLGKT+QA+A+ P L+
Sbjct: 949 QIPSTFQAQLRDYQLVGFDWASRLAHWGAGACLADDMGLGKTLQALAILLSRASHGPSLV 1008
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNT-KRNIPLDGL--F 278
+ P+S+ +W Q+ L P+ V + S+ S+NT +R I L+ L F
Sbjct: 1009 IAPTSVCFNWQ---QEALKFAPTLKVKIFSE------------STNTMQREILLNDLGPF 1053
Query: 279 N--IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
+ IISY ++ + IL ++ ++ADE+ LKN AKRT A + K+ + ++ +GT
Sbjct: 1054 DCVIISYGLLQRESEILKEVHWHSIVADEAQALKNPLAKRTKAAFAL--KSDFKMITTGT 1111
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYC---KGGVFGIYQGASNHEELHNLMKATV 393
P + EL+ + P + N+ +G R+ + + L L++ +
Sbjct: 1112 PIENNLTELWSLFRFINPGLLGNIKRFGERFSLPIENSKEDPLAARKASQALKTLIQPFI 1171
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVV----KGKIKACKSEEEV 449
+ RR+K VL +LP + + ++++ K+ R Y R L V + +A E+ +
Sbjct: 1172 L-RRMKNQVLTELPSRTEINIRVEMSAKE-RDFYEALR-LNAVDNISQSGQQANAGEQRI 1228
Query: 450 QSL----KFTEKNLINKIY---TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAI 502
+ L K + K+ TD AK+ A+ + LE + K LIF+ L I
Sbjct: 1229 KMLAELVKLRQACCNPKLVMAETDIPSAKLAALDELLEELKLNNHKALIFSQFVGHLQLI 1288
Query: 503 HQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIF 562
Q K +DG TP RQ V FQ + ++S+KAGG GL LTAA VI
Sbjct: 1289 KQHIEAKGFSYQYLDGSTPQKQRQKSVNAFQSGEG-DIFLISLKAGGSGLNLTAADYVIH 1347
Query: 563 AELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
+ W P QA DRAHRIGQ+ V +Y L+ +T+++ + + + K + ++L G+E
Sbjct: 1348 MDPWWNPAVEEQASDRAHRIGQLRPVTIYRLITQNTIEEKIVALHQHKRDLADKLLSGNE 1407
Query: 623 NSLEVS 628
+ ++S
Sbjct: 1408 AATKLS 1413
>gi|67478494|ref|XP_654639.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56471706|gb|EAL49253.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449708079|gb|EMD47606.1| chromodomain helicase DNA binding protein, putative [Entamoeba
histolytica KU27]
Length = 1262
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 235/500 (47%), Gaps = 45/500 (9%)
Query: 138 EIENLHPLVQRAIASASAAPDLRE--KYDQIPAHIESKLLPFQRDGVR---FALQHGGRI 192
EIE H ++ P R+ K+ + P +++KL +Q +GV +A +
Sbjct: 332 EIEKYHKRIKEWEEKKRCTPLPRKFIKFVEGP-EVKNKLRDYQIEGVNWITYAFSQNTNV 390
Query: 193 LLADEMGLGKTIQAIAVATCFRD----VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
+LADEMGLGKT+Q I D + P L++ P S +W+ +W P VV
Sbjct: 391 ILADEMGLGKTVQTITFIRHLYDNYNIIGPFLVIVPLSTISNWSKEFNKWA--PKLNCVV 448
Query: 249 VLSQLGGSNRSGF--TIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADES 306
G +R+ T + N K I + L + S+++V+K Q++ ++K + DE+
Sbjct: 449 YTGD--GESRAIIRKTEMFGNKKGTIKFNVL--LTSFELVIKDQDVFNQFHWKYTVVDEA 504
Query: 307 HFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNR 366
H LKN + + + + LL++GTP + EL+ L L+P + + E+
Sbjct: 505 HRLKNNEGQLYEVLMRTT--TENKLLITGTPLQNTLKELWSLLHFLHPKKFISFEEFEKT 562
Query: 367 YCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI 426
Y +G ++HN +K ++RR+KKDV LP K+ + + ++++ +Q
Sbjct: 563 YS-------VEGTEEINKIHNELKP-YLLRRMKKDVEKSLPPKKERILRVELS-PIQKQY 613
Query: 427 YA--LFRELEVVKGKIKACKSE-----EEVQSLKFTEKNLINKIYTDSAE-------AKI 472
Y + + + +K ++ K+ E++ L LIN++ E K+
Sbjct: 614 YRWIITKNSDALKKAVQQQKTSLMNICMELKKL-CNHPILINELMNSENEENLIQSCGKM 672
Query: 473 PAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
+ L + E G + LIF+ MLD + + + R+DG +RQ + F
Sbjct: 673 ILLDKLLVKLKETGHRVLIFSQMVRMLDVLSNYLHFRGFNYQRLDGAMGREARQRAMDHF 732
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
KD +LS +AGG+G+ LT A TVI + W P + +QA+ R HRIGQ +VN+Y
Sbjct: 733 NAKDSTDFVFLLSTRAGGLGINLTTADTVIIYDSDWNPQNDLQAQARCHRIGQEKTVNIY 792
Query: 592 YLLANDTVDDIVWDVVRSKL 611
L T+++ + + KL
Sbjct: 793 RLATEGTIEEKILLSAKKKL 812
>gi|139438973|ref|ZP_01772433.1| Hypothetical protein COLAER_01439 [Collinsella aerofaciens ATCC
25986]
gi|133775684|gb|EBA39504.1| SNF2 family N-terminal domain protein [Collinsella aerofaciens ATCC
25986]
Length = 1173
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 139/484 (28%), Positives = 231/484 (47%), Gaps = 63/484 (13%)
Query: 166 IPAHIESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIA---VATCFRDVW 217
+P +++ L +Q DG ++ +L+H GG +LAD+MGLGKT+Q IA D
Sbjct: 702 VPVSLKATLRGYQVDGYQWLGSLEHLGLGG--ILADDMGLGKTLQMIAHILARVEAGDAK 759
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
P L++ P+SL +W A ++++ PS V IV + +R + + G
Sbjct: 760 PTLVVCPASLVYNWTAELERF---APSLDVC-------------AIVGAKAQRRVQIAGA 803
Query: 278 FN----IISYDVVLKLQNILMSSNFKIVIADESHFLKN--AQAKRTAATLPIIKKAQYAL 331
I SYD++ + + +F V+ DE+ ++KN Q A LP A
Sbjct: 804 DEHNVVITSYDLMRRDIDEYAEQDFARVVLDEAQYIKNPLTQVAHAAKRLP----AGVRF 859
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L+GTP +R EL+ + L P + + + R+ + H E + +
Sbjct: 860 ALTGTPIENRLSELWSIFDFLMPGLLGSRESFAKRF---------ESPVEHAEGDSAARL 910
Query: 392 TVMI-----RRLKKDVLAQLPVKRRQQVF---------LDVAEKDMRQIYALFREL-EVV 436
++ RR+K+DV+A LP K V L +A +D RE+ E
Sbjct: 911 QALVSPFVLRRVKEDVVADLPEKIEDTVMAQLTGEQRKLYLANQDRIAQQVQHREVSEFK 970
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQ 496
K K+K +++ + + +L + Y + AK+ A ++ + ++ G L+F+
Sbjct: 971 KDKLKVLAELTKLRQI-CCDPHLHYEDYK-AGSAKLDACMELVHGALDGGHHILLFSQFT 1028
Query: 497 PMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTA 556
MLD I + K+ + +++ G + SR +V +FQ +V ++S+KAGGVGL LTA
Sbjct: 1029 GMLDIIGKRLAKEDIGFLKLTGASSKESRAKMVAQFQ-AGEVPVFLISLKAGGVGLNLTA 1087
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A VI + W QA DRAHRIGQ +V VY L+A DT+++ + + SK + +
Sbjct: 1088 ADVVIHYDPWWNVAAQDQATDRAHRIGQQHTVTVYKLIAKDTIEERIMRMQESKRDLVNS 1147
Query: 617 VLDG 620
VL G
Sbjct: 1148 VLGG 1151
>gi|410624761|ref|ZP_11335551.1| helicase [Glaciecola mesophila KMM 241]
gi|410155607|dbj|GAC22320.1| helicase [Glaciecola mesophila KMM 241]
Length = 1433
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 239/486 (49%), Gaps = 43/486 (8%)
Query: 165 QIPAHIESKLLPFQRDGVRFA--LQH-GGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
QIP+ +++L +Q+ G +A L H G LAD+MGLGKT+QA+A+ P L+
Sbjct: 957 QIPSTFQAQLRDYQQVGFDWASRLAHWGAGACLADDMGLGKTLQALAILLSRASAGPSLV 1016
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNT-KRNIPLD--GLF 278
+ P+S+ +W Q+ L P+ + + + S+NT +R + L+ G F
Sbjct: 1017 IAPTSVCFNWQ---QEALKFAPTLNIKLFAD------------STNTLQREVLLNDLGPF 1061
Query: 279 N--IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
+ IISY ++ + IL ++ ++ADE+ LKN AKRT A + K+ + ++ +GT
Sbjct: 1062 DCVIISYGLLQRESEILKGVHWHSIVADEAQALKNPLAKRTKAAYAL--KSDFKMITTGT 1119
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYC---KGGVFGIYQGASNHEELHNLMKATV 393
P + EL+ + P + N+ +G R+ + + L L++ +
Sbjct: 1120 PIENNLTELWSLFRFINPGLLGNIKRFGQRFSVPIENAKEDPLAARKASQALKTLIQPFI 1179
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVA--EKDMRQIYALFRELEVVKGKIKACKSEEEVQS 451
+ RR+K VL +LP + + ++++ E+D + L + + +A E+ ++
Sbjct: 1180 L-RRMKNQVLTELPSRTEINIRVEMSSQERDFYEALRLNAIDNISQSGQQANAGEQRIRM 1238
Query: 452 L----KFTEKNLINKIYTDSAEAKIPAV-----LDYLETVIEAGCKFLIFAHHQPMLDAI 502
L K + +K+ AE IP+ + LE + K LIF+ L I
Sbjct: 1239 LAELVKLRQACCNSKLVM--AETTIPSAKLAALDELLEELRLNNHKALIFSQFVGHLQLI 1296
Query: 503 HQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIF 562
Q K +DG TP RQA V FQ + ++S+KAGG GL LTAA VI
Sbjct: 1297 KQHVEAKGFSYQYLDGSTPQKQRQASVNAFQGGEG-DIFLISLKAGGSGLNLTAADYVIH 1355
Query: 563 AELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
+ W P QA DRAHRIGQ+ V VY L+ +T+++ + + + K + ++L+G+E
Sbjct: 1356 MDPWWNPAVEEQASDRAHRIGQLRPVTVYRLITQNTIEERIVALHQHKRDLADKLLEGNE 1415
Query: 623 NSLEVS 628
+ ++S
Sbjct: 1416 AATKLS 1421
>gi|410074857|ref|XP_003955011.1| hypothetical protein KAFR_0A04410 [Kazachstania africana CBS 2517]
gi|372461593|emb|CCF55876.1| hypothetical protein KAFR_0A04410 [Kazachstania africana CBS 2517]
Length = 1085
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 231/486 (47%), Gaps = 57/486 (11%)
Query: 162 KYDQIPAHIESKLLPFQRDGVRF--ALQHGGRI-LLADEMGLGKTIQAIAVATCFRDV-- 216
++ + PA++ KL +Q G+ + +L + G +LADEMGLGKT+Q +A + +
Sbjct: 117 QFRESPAYVNGKLRSYQVQGLNWLVSLHNDGLAGILADEMGLGKTLQTVAFLGYLKYIEN 176
Query: 217 --WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P S +W I +W P + V L G ++ + +P
Sbjct: 177 IDGPFLVIAPKSTLNNWLREINRW--TPEVDAFV----LQGDKEERQEMIKTKL---LPC 227
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
D I SY+++++ ++ N++ ++ DE+H +KN ++ + K + LL++
Sbjct: 228 DFDIVIASYEIIIREKSAFKKFNWEYIVIDEAHRIKNEESMLSQVLREFTSKNR--LLIT 285
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE--------LH 386
GTP + EL+ L L PD++ N ++ + G SN+EE LH
Sbjct: 286 GTPLQNNLHELWALLNFLLPDIFSNSQDFDEWFSSEG--------SNNEENQELIVKQLH 337
Query: 387 NLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA---EKDMRQIYALFRELEVVKGKIKAC 443
+++ ++RR+K DV L K+ +++ ++ +K RQI L ++++ V G
Sbjct: 338 TILQP-FLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYRQI--LEKDIDAVNGSNGNK 394
Query: 444 KSEEEVQSLKFTEKNLINKIYT-DSAEAKIP--------------AVLDYLETVIE-AGC 487
+S+ + ++ + N Y D AE P VLD L T ++ G
Sbjct: 395 ESKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNSAKLKVLDKLLTKMKMEGS 454
Query: 488 KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMK 546
+ LIF+ +LD + + RIDG T R + E+ D K +L+ +
Sbjct: 455 RVLIFSQMSRLLDILEDYCFFRGYQYCRIDGSTDHEDRIRSIDEYNAPDSEKFLFLLTTR 514
Query: 547 AGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDV 606
AGG+G+ LT+A V+ + W P +QA DRAHRIGQ V V+ + +++V++ + +
Sbjct: 515 AGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTDNSVEEKILER 574
Query: 607 VRSKLE 612
KL+
Sbjct: 575 ATQKLK 580
>gi|194756516|ref|XP_001960523.1| GF13400 [Drosophila ananassae]
gi|190621821|gb|EDV37345.1| GF13400 [Drosophila ananassae]
Length = 1027
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 240/499 (48%), Gaps = 55/499 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++D P +I+S ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +
Sbjct: 115 RFDASPTYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFK 174
Query: 215 -DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P +++ P S +W ++W P V ++ G + T + R++
Sbjct: 175 NQAGPHIVIVPKSTLQNWVNEFKKW--CPTLRAVCLI----GDQEARNTFI-----RDVL 223
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
+ G +++ SY++ ++ +++ N++ ++ DE+H +KN ++K + L K A L
Sbjct: 224 MPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSK-LSEILREFKTAN-RL 281
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PDV+ + ++ + G + LH ++K
Sbjct: 282 LITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLG---DDALITRLHAVLKP 338
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK +V +L K+ ++F+ ++ K R Y L +++++V G K K +
Sbjct: 339 -FLLRRLKAEVEKRLKPKKEMKIFVGLS-KMQRDWYTKVLLKDIDIVNGAGKVEKMR--L 394
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLIFA 493
Q++ + N Y D AE P A+LD L + E G + LIF+
Sbjct: 395 QNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLIYNSGKMAILDKLLPKLQEQGSRVLIFS 454
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + + + R+DG TP R + E+ + K +LS +AGG+G+
Sbjct: 455 QMTRMLDILEDYCHWRGYNYCRLDGQTPHEDRNRQIQEYNMDNSTKFIFMLSTRAGGLGI 514
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA DRAHRIGQ V V+ L+ TV++ + + KL
Sbjct: 515 NLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLR 574
Query: 613 ------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 575 LDKMVIQGGRLVDNRSNQL 593
>gi|195430100|ref|XP_002063095.1| GK21565 [Drosophila willistoni]
gi|194159180|gb|EDW74081.1| GK21565 [Drosophila willistoni]
Length = 1026
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 241/499 (48%), Gaps = 55/499 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++D P++I+S ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +
Sbjct: 115 RFDASPSYIKSGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFK 174
Query: 215 -DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P +++ P S +W ++W PS V L +G + I R++
Sbjct: 175 NQAGPHIVIVPKSTLQNWVNEFKKWC---PSLRAVCL--IGDQDTRNTFI------RDVL 223
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
L G +++ SY++ ++ +++ N++ ++ DE+H +KN ++K + L K A L
Sbjct: 224 LPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSK-LSEILREFKTAN-RL 281
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PDV+ + ++ + G + LH ++K
Sbjct: 282 LITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLG---DDALITRLHAVLKP 338
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK +V +L K+ ++F+ ++ K R Y L +++++V G K K +
Sbjct: 339 -FLLRRLKAEVEKRLKPKKEMKIFVGLS-KMQRDWYTKVLLKDIDIVNGAGKVEKMR--L 394
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLIFA 493
Q++ + N Y D AE P A+LD L + E + LIF+
Sbjct: 395 QNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQESRVLIFS 454
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + + + R+DG TP R + E+ ++ K +LS +AGG+G+
Sbjct: 455 QMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEYNMENSTKFIFMLSTRAGGLGI 514
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA DRAHRIGQ V V+ L+ TV++ + + KL
Sbjct: 515 NLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLR 574
Query: 613 ------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 575 LDKMVIQGGRLVDNRSNQL 593
>gi|182626118|ref|ZP_02953879.1| helicase, SNF2/RAD54 family [Clostridium perfringens D str. JGS1721]
gi|177908639|gb|EDT71160.1| helicase, SNF2/RAD54 family [Clostridium perfringens D str. JGS1721]
Length = 1084
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 239/506 (47%), Gaps = 64/506 (12%)
Query: 148 RAIASASAAPDLREKYD-------QIPAHIESKLLPFQRDGVRF--ALQH---GGRILLA 195
R I +L+ K+ ++P +++ L +Q+ G + L+H GG +L
Sbjct: 587 RYIKGKKKLNELKSKFKNINKLSFEVPKDLKANLREYQKFGYNWLKTLEHLGLGG--ILG 644
Query: 196 DEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG 255
DEMGLGKT+QAI + L++ P+SL +W +++ P+ +V VL++ G
Sbjct: 645 DEMGLGKTLQAITFILSNKGK-KTLVVAPTSLIYNWK---EEFNKFAPNLVVEVLNE-GK 699
Query: 256 SNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHF 308
R + L +I S DV++ N+L NF DE+
Sbjct: 700 DKRE---------------EALRDIESKDVIITTYNLLKRDLEEYKKINFDYCFIDEAQA 744
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
+KN ++ + A + ++Y L+GTP + +EL+ + + P + + RY
Sbjct: 745 IKNPDSQNSEAVKEV--NSEYKFALTGTPMENSLMELWSIFDFVMPGYLYDRKRFTVRYY 802
Query: 369 KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA 428
K + + E+H+L+K ++ RR KKDV+ +LP K + +++ E D +++Y+
Sbjct: 803 KK----LNESEEVLSEIHSLIKPFIL-RRKKKDVIKELPDKIEKMHLVNLGE-DQKKVYS 856
Query: 429 LFRE------------LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVL 476
++ E K KI+ +++ L IN +SA KI A++
Sbjct: 857 IYANNALSIMEKKQDAEEFNKSKIEILSYITKLRQLALDPSVTINDYMGESA--KIEALV 914
Query: 477 DYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD 536
+ L IE G K L+F+ +L I ++K+ +DG R +V EF E +
Sbjct: 915 EILNQGIEEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGE 974
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN 596
+ ++S+KAGG+GL LT+A VI + W P QA DRAHR+GQ + V V L+A
Sbjct: 975 N-SVFLISLKAGGIGLNLTSADIVIHFDPWWNPAVENQATDRAHRMGQKNVVEVIKLIAK 1033
Query: 597 DTVDDIVWDVVRSKLENLGQVLDGHE 622
T+++ V + K E + ++++ E
Sbjct: 1034 GTIEEKVVALQEEKKELISKIIEEGE 1059
>gi|291408171|ref|XP_002720328.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a1-like isoform 3 [Oryctolagus
cuniculus]
Length = 1049
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 228/469 (48%), Gaps = 49/469 (10%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 206 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 262
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 263 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 315
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 316 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 373
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH+++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 374 DFDSWFDTKNCLGDQKLV---ERLHSVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 428
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 429 MQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 486
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 487 HIVNNSGKMLVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 546
Query: 524 SRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAHRI
Sbjct: 547 EREEAIEAFNVPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 606
Query: 583 GQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
GQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 607 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 655
>gi|408672190|ref|YP_006871938.1| SNF2-related protein [Emticicia oligotrophica DSM 17448]
gi|387853814|gb|AFK01911.1| SNF2-related protein [Emticicia oligotrophica DSM 17448]
Length = 833
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 140/508 (27%), Positives = 247/508 (48%), Gaps = 42/508 (8%)
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRD---VWPVLILTPSS 226
++ +L P+Q+ GV FA GR L+ADEMGLGKT+QAI A ++ + VLI+ P+S
Sbjct: 233 VKIELFPYQKKGVFFAAT-AGRSLIADEMGLGKTLQAITTAELYKKELGINRVLIVCPTS 291
Query: 227 LRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVV 286
L+ W + I+++ S + V+ T++ + +D + I+SY
Sbjct: 292 LKYQWKSEIERF---TESTVHVIEG----------TLIKRAAQYQY-VDAFYVIVSYHTT 337
Query: 287 LKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQ--YALLLSGTPALSRPIE 344
+ ++L +VI DE+ +KN + K + IKK YAL+L+GTP ++ E
Sbjct: 338 TQDLDLLNKMEADMVILDEAQRIKNWKTKVSQQ----IKKLNTPYALILTGTPLENKLEE 393
Query: 345 LFKQLEALYPDVYK--NVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDV 402
L+ + + DVY+ V+ + +++ G G N E+ L+ + ++IRR KK+V
Sbjct: 394 LYSITQLI--DVYRLGPVYRFLDQHQISDESGKVVGYKNLHEISKLL-SDILIRRTKKEV 450
Query: 403 LAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINK 462
L+QLP + + +F+ + ++ M L + + K + E + +
Sbjct: 451 LSQLPKRMDKNLFVPMTQEQMNIHNELGDNVAKLVNKWRRYGFLNETDRRRLILSLSQMR 510
Query: 463 IYTDSA---------EAKIPAVLDYLETVIE-AGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
+ DS + KI V++ LE +E + K +IF+ + M + Q +++
Sbjct: 511 MVCDSTFILDQKTRHDTKIEEVMNILEEFLENSEEKVVIFSQWERMTRLVAQELTDREIK 570
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
+ GG R+ L+ FQ D LS AGGVGL L AAS +I ++ W P L
Sbjct: 571 FENLHGGIESTKRKDLLDNFQ-NDPASRVFLSTDAGGVGLNLQAASLLINLDIPWNPAIL 629
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
Q R +R+GQ +V++ L++ T++ + DV++ K VLDG E+++ + +
Sbjct: 630 EQRIARIYRLGQERNVSIINLISTGTIEHKMLDVLKFKGAMAEGVLDGGEDTIFLGEDKF 689
Query: 633 RSSPAKQKTLDSFLKRCNNVDDS--EHQ 658
+ ++L + N + DS EH+
Sbjct: 690 KQFMNSVESLTDAPQNENTIIDSSEEHE 717
>gi|404371075|ref|ZP_10976385.1| hypothetical protein CSBG_01636 [Clostridium sp. 7_2_43FAA]
gi|226912809|gb|EEH98010.1| hypothetical protein CSBG_01636 [Clostridium sp. 7_2_43FAA]
Length = 1084
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 239/485 (49%), Gaps = 62/485 (12%)
Query: 167 PAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWP--V 219
P + ++L P+Q++G + L GG +L DEMGLGKTIQAI T P
Sbjct: 618 PLKLIAELRPYQKEGYNWLKTMDYLGFGG--ILGDEMGLGKTIQAI---TFILSSLPSKT 672
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
LI+ P+SL +W++ I+++ PS +T+V+ + I + L N
Sbjct: 673 LIVAPTSLIYNWSSEIEKF---APS--------------IKYTVVNGSKDERIKI--LDN 713
Query: 280 IISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
I YDV++ N++ F DE+ ++KN+ ++ + + I ++AL
Sbjct: 714 IEKYDVIITTYNLIKRDLDEYEKLQFDYCFIDEAQYIKNSHSQNSLSVKKIKSYRKFAL- 772
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
+GTP + +EL+ + + P + + RY K + + EEL+ L+K
Sbjct: 773 -TGTPVENSLMELWSIFDFIMPGYLFDEKRFSVRYHKK----LNESEEILEELNKLIKPF 827
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFR-------ELEVVKGKIKACKS 445
++ RR KKDV+ +LP K +++ + ++E + ++Y ++ E +V +K K
Sbjct: 828 IL-RRYKKDVIKELPQKIEKKLIVSMSE-EQEKVYTIYADHAKSLIEKKVKDDDLKTSKI 885
Query: 446 E-----EEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLD 500
E +++ L LIN Y ++ K+ A+++ L+ IE G K L+F+ +L
Sbjct: 886 EILSYITKLRQLCLDPSVLIND-YVGTS-GKVDALIEILQQGIEEGHKILVFSQFTSVLK 943
Query: 501 AIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTV 560
I + + +DG P R LV EF E + ++S+KAGG GL LT+A V
Sbjct: 944 NIASKLRSEHILFSYLDGSIPSEKRLELVNEFNEGIN-SVFLISLKAGGTGLNLTSADIV 1002
Query: 561 IFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
I + W P QA DRAHR GQ + V V L+A +++++ + D+ K + + +++D
Sbjct: 1003 IHFDPWWNPAVEDQATDRAHRFGQTNIVEVIKLIARNSIEEKIIDLQDEKRKLIEKIID- 1061
Query: 621 HENSL 625
+EN +
Sbjct: 1062 NENDI 1066
>gi|291408169|ref|XP_002720327.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a1-like isoform 2 [Oryctolagus
cuniculus]
Length = 1041
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 228/469 (48%), Gaps = 49/469 (10%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 198 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 254
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 255 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 307
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 308 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 365
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH+++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 366 DFDSWFDTKNCLGDQKLV---ERLHSVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 420
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 421 MQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 478
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 479 HIVNNSGKMLVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 538
Query: 524 SRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAHRI
Sbjct: 539 EREEAIEAFNVPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 598
Query: 583 GQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
GQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 599 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 647
>gi|295670740|ref|XP_002795917.1| TATA-binding protein-associated factor MOT1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226284050|gb|EEH39616.1| TATA-binding protein-associated factor MOT1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 1906
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 149/550 (27%), Positives = 234/550 (42%), Gaps = 118/550 (21%)
Query: 165 QIPAHIESKLLPFQRDGV-------RFALQHGGRILLADEMGLGKTIQAIAVATCFRDV- 216
+IP I+++L +Q++GV R+ L HG +L D+MGLGKT+Q + + +
Sbjct: 1306 EIPVAIKAELRSYQQEGVNWLAFLNRYHL-HG---ILCDDMGLGKTLQTLCIVASDHHMR 1361
Query: 217 --------------WPVLILTPSSLRLHWAAMIQQWLNI--------PPSEIVVVLSQLG 254
P LI+ P +L HW I+Q+ PP+E + S L
Sbjct: 1362 AEEFARTGAPEAKRLPSLIICPPTLSGHWQQEIKQYAPFLSCLAYVGPPAERARLRSSL- 1420
Query: 255 GSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQA 314
IV I SYD+ + N+ + DE H +KN +A
Sbjct: 1421 ----DSVDIV---------------ITSYDICRNDNDTFRPLNWNYCVLDEGHLIKNPKA 1461
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
K T A + K+ + L+LSGTP + +EL+ + L P + +R+ K
Sbjct: 1462 KITRAVKCL--KSNHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIAAS 1519
Query: 375 IYQGASNHEE------LHNLMKATV--MIRRLKKDVLAQLPVKRRQQVFLDVAE------ 420
+ +S+ E+ + L K + ++RRLK++VL LP K Q + D+++
Sbjct: 1520 RFSKSSSKEQEAGALAIEALHKQVLPFLLRRLKEEVLNDLPPKILQNYYCDLSDLQRKLF 1579
Query: 421 --------KDMRQIYA---------LFRELEVVKGKIKACKSEEEVQSLKFTEKNLI--- 460
KD+ +I +F+ L+ ++ + C S V N I
Sbjct: 1580 EDFTKKEQKDIAKIVGSTDKEAKQHIFQALQYMR---RLCNSPALVVKENHKRYNEIQKS 1636
Query: 461 ----NKIYTDSAEA-KIPAVLDYL-----------ETVIEAGCKF------LIFAHHQPM 498
N D A A K+ A+ D L E ++ G + L+F + M
Sbjct: 1637 LEAKNSHIRDVAHAPKLSALRDLLVDCGIGVDPSTEGELDTGVNYVSPHRALVFCQMKEM 1696
Query: 499 LDAIHQLFLKK---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLT 555
LD + KK V +R+DG RQ +V +F +L+ GG+GL LT
Sbjct: 1697 LDIVQNDVFKKLLPSVQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT 1756
Query: 556 AASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLG 615
A TVIF E W P IQA DRAHRIGQ VNVY L+ T+++ + ++ R K++
Sbjct: 1757 GADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAS 1816
Query: 616 QVLDGHENSL 625
V++ L
Sbjct: 1817 TVVNQQNAGL 1826
>gi|422346294|ref|ZP_16427208.1| hypothetical protein HMPREF9476_01281 [Clostridium perfringens
WAL-14572]
gi|373226916|gb|EHP49238.1| hypothetical protein HMPREF9476_01281 [Clostridium perfringens
WAL-14572]
Length = 1084
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 240/506 (47%), Gaps = 64/506 (12%)
Query: 148 RAIASASAAPDLREKYD-------QIPAHIESKLLPFQRDGVRF--ALQH---GGRILLA 195
R I +L+ K+ ++P +++++L +Q+ G + L+H GG +L
Sbjct: 587 RYIKGKKKLNELKSKFKNINKLSFEVPKNLKAELREYQKFGYNWLKTLEHLGLGG--ILG 644
Query: 196 DEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG 255
DEMGLGKT+QAI + L++ P+SL +W +++ P+ +V VL++ G
Sbjct: 645 DEMGLGKTLQAITFILSNKGK-KTLVVAPTSLIYNWK---EEFNKFAPNLVVEVLNE-GK 699
Query: 256 SNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHF 308
R + L +I S DV++ N+L NF DE+
Sbjct: 700 DKRE---------------EALRDIESKDVIITTYNLLKRDLEEYKKINFDYCFIDEAQA 744
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
+KN ++ + A + ++Y L+GTP + +EL+ + + P + + RY
Sbjct: 745 IKNPDSQNSEAVKEV--NSEYKFALTGTPMENSLMELWSIFDFVMPGYLYDRKRFTVRYY 802
Query: 369 KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA 428
K + + E+H+L+K ++ RR KKDV+ +LP K + +D+ E + +++Y+
Sbjct: 803 KK----LNESEEVLNEIHSLIKPFIL-RRKKKDVIKELPDKIEKMHLVDLGE-EQKKVYS 856
Query: 429 LFRE------------LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVL 476
++ E K KI+ +++ L IN +SA KI A++
Sbjct: 857 IYANNALSIMEKKQDAEEFNKSKIEILSYITKLRQLALDPSVTINDYMGESA--KIEALV 914
Query: 477 DYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD 536
+ L IE G K L+F+ +L I ++K+ +DG R +V EF E +
Sbjct: 915 EILNQGIEEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGE 974
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN 596
+ ++S+KAGG GL LT+A VI + W P QA DRAHR+GQ + V V L+A
Sbjct: 975 N-SVFLISLKAGGTGLNLTSADIVIHFDPWWNPAVENQATDRAHRMGQKNVVEVIKLIAK 1033
Query: 597 DTVDDIVWDVVRSKLENLGQVLDGHE 622
T+++ V + K E + ++++ E
Sbjct: 1034 GTIEEKVVALQEEKKELISKIIEEGE 1059
>gi|116283949|gb|AAH16071.1| Smarca1 protein [Mus musculus]
Length = 1032
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 227/469 (48%), Gaps = 49/469 (10%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 203 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 259
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 260 PSLRVICF--VGDKDVRAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 312
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 313 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 370
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 371 DFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 425
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 426 MQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 483
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 484 HIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHE 543
Query: 524 SRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAHRI
Sbjct: 544 EREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 603
Query: 583 GQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
GQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 604 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 652
>gi|296450398|ref|ZP_06892154.1| SNF2/RAD54 family helicase [Clostridium difficile NAP08]
gi|296879479|ref|ZP_06903473.1| SNF2/RAD54 family helicase [Clostridium difficile NAP07]
gi|296260659|gb|EFH07498.1| SNF2/RAD54 family helicase [Clostridium difficile NAP08]
gi|296429625|gb|EFH15478.1| SNF2/RAD54 family helicase [Clostridium difficile NAP07]
Length = 1062
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 148/501 (29%), Positives = 241/501 (48%), Gaps = 61/501 (12%)
Query: 165 QIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPV 219
+IPA++ + L +Q +G+ + + GG +LADEMGLGKTIQ IA +
Sbjct: 602 EIPANLNANLRDYQINGLNWFKVLDYYKFGG--ILADEMGLGKTIQTIAFLLSLSNK-KS 658
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
LI+TP+SL +W +++ +I V+L + GS R K + L+
Sbjct: 659 LIVTPTSLIYNWKNEFEKF----APDIKVLL--IHGSKRD-------REKCFMELE---- 701
Query: 280 IISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
++DV+L L + F I DE+ +KN A TA+ I + ++AL
Sbjct: 702 --NFDVILTTYGTLRNDLEKYSEIKFDYCILDEAQNIKNPLALVTASVKSINAENKFAL- 758
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIY-QGASNHEELHNLMKA 391
+GTP + +EL+ + + P G Y K ++ N + L L+K
Sbjct: 759 -TGTPMENNLLELWSIFDFIMP---------GYLYSKAKFQELFINKEDNVKNLKKLIKP 808
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQS 451
++ RR KK V+ +LP K + F+++ K+ ++IY+++ + K K K K ++ V
Sbjct: 809 FIL-RRSKKQVMKELPDKIEKNFFVEL-NKEQKKIYSVYSKDIQDKIKDKNLKKDKIVIF 866
Query: 452 LKFT-------EKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
T + +++ K Y + +KI L+ L I K L+F+ +L I +
Sbjct: 867 SYLTKLRQLCLDPSIVVKDYNKKS-SKIETCLEILRDSINENHKILLFSQFTSVLKNISK 925
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
K K+ IDG T R LV EF D K ++S+KAGG GL LT+A VI +
Sbjct: 926 ELDKYKIKYHYIDGKTNAKERLELVDEFNNSIDKKVFLISLKAGGTGLNLTSADMVIHFD 985
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 624
W P QA DRAHR GQ +SV V L+A T+++ + + SK E + Q ++G
Sbjct: 986 PWWNPSVENQASDRAHRFGQKNSVQVIKLIAKGTIEEKIIKLQESKKELINQFING---- 1041
Query: 625 LEVSSSQIRSSPAKQKTLDSF 645
E+S+ + S + ++ +D F
Sbjct: 1042 -ELSNEGVLKSLSDEEIIDLF 1061
>gi|317484163|ref|ZP_07943092.1| SNF2 family domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316924512|gb|EFV45669.1| SNF2 family domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 1343
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 222/482 (46%), Gaps = 44/482 (9%)
Query: 166 IPAHIESKLLPFQRDGV----RFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
+P+ + ++L +Q DG R A + G LAD+MGLGKT+Q IAV ++ P +I
Sbjct: 873 VPSTLRAELRDYQLDGYVWMSRLA-RWGAGACLADDMGLGKTVQTIAVLLAQAEMGPSII 931
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
+ P+S+ +W + ++ + + + G +R+ P D L +
Sbjct: 932 IAPTSVCHNWENELDRFAP------TLSVHRFGPGDRAALVGALG------PGDVL--VA 977
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSR 341
SY ++ L +++ + DE+ LKNA +R A+ I A + + L+GTP +R
Sbjct: 978 SYGLLHTEAKCLSGREWQVAVFDEAQALKNADTRRARASRQI--PAAFRVALTGTPIENR 1035
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKGGV-----FGIYQGASNHEELHNLMKATVMIR 396
+L+ + P + + R+ + +G S + + ++R
Sbjct: 1036 LEDLWSLFNLINPGLLGTRQSFQKRFAAASAPSTEENAVSEGQSAARQALRALVRPFILR 1095
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTE 456
R K +VL +LP + Q + +D+ + D R Y R + ++A K E+ S KF+
Sbjct: 1096 RTKSEVLTELPPRTEQVIEVDLPD-DERAFYEALRRNALAS--LEAAKQEDAEGSQKFSI 1152
Query: 457 KNLINKIY------------TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
+ K+ T AK+ A ++ +E ++ G K L+F+ L +
Sbjct: 1153 LTELMKLRRACCAPVLIDPGTSLTGAKLSAFMELVEELVRGGHKALVFSQFVGCLSEARR 1212
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
L +DG TP RQA V FQ K D+ ++S+KAGG GL LTAA VI
Sbjct: 1213 LLDAAGYGYQYLDGSTPDRERQAAVAAFQSGKGDL--FLISLKAGGQGLNLTAADYVIHL 1270
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
+ W P QA DRA+R+GQ V VY L+A TV++ + + RSK VL+G +
Sbjct: 1271 DPWWNPAVEDQASDRAYRLGQQRPVTVYRLVARGTVEESILKLHRSKRALAADVLEGTDV 1330
Query: 624 SL 625
L
Sbjct: 1331 PL 1332
>gi|164419749|ref|NP_620604.2| probable global transcription activator SNF2L1 isoform b [Homo
sapiens]
gi|397496286|ref|XP_003818972.1| PREDICTED: probable global transcription activator SNF2L1 isoform 1
[Pan paniscus]
gi|402911364|ref|XP_003918303.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Papio anubis]
gi|384948912|gb|AFI38061.1| putative global transcription activator SNF2L1 isoform b [Macaca
mulatta]
gi|387540730|gb|AFJ70992.1| putative global transcription activator SNF2L1 isoform b [Macaca
mulatta]
gi|410221928|gb|JAA08183.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
gi|410253106|gb|JAA14520.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1042
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 227/469 (48%), Gaps = 49/469 (10%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 199 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 255
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 256 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 308
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 309 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 366
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 367 DFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 421
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 422 MQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 479
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 480 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 539
Query: 524 SRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAHRI
Sbjct: 540 EREEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 599
Query: 583 GQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
GQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 600 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 648
>gi|380815786|gb|AFE79767.1| putative global transcription activator SNF2L1 isoform b [Macaca
mulatta]
gi|410340063|gb|JAA38978.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1036
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 230/471 (48%), Gaps = 53/471 (11%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 199 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 255
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 256 PSLRVICF--VGDKDARAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 306
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 307 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 364
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 365 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 420
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 421 -KMQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 477
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 478 DEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTP 537
Query: 522 PASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAH
Sbjct: 538 HEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 597
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
RIGQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 598 RIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 648
>gi|301107063|ref|XP_002902614.1| chromodomain protein, putative [Phytophthora infestans T30-4]
gi|262098488|gb|EEY56540.1| chromodomain protein, putative [Phytophthora infestans T30-4]
Length = 1748
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 148/518 (28%), Positives = 241/518 (46%), Gaps = 70/518 (13%)
Query: 139 IENLHPLVQRAIASASAAPDLREKYDQIPAHI-ESKLLPFQRDGVR---FALQHGGRILL 194
I HP + P+ KY + P + ++ L +Q +G+ F + +L
Sbjct: 698 INGAHPAT---YSDVRPEPNTWAKYLESPVYNNQNTLRSYQLEGLNWMTFCWYNRRNCIL 754
Query: 195 ADEMGLGKTIQAIAVATCFRDV----WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVL 250
ADEMGLGKT+QA ++ R P L++ P + +W I+ W ++ VV
Sbjct: 755 ADEMGLGKTVQATSILEHLRQREFIRGPFLVVAPLATLGNWKREIETWTSM---NCVVYH 811
Query: 251 SQLGGSNRSGFT-------IVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIV 301
GGS+ F ++ KR I FN++ SY ++ L S +++ +
Sbjct: 812 DSEGGSDIRAFIREQEFHFASEAHRKRGIYK---FNVLVTSYQTLMMDAEFLESIHWRYI 868
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQY--ALLLSGTPALSRPIELFKQLEALYPDVYKN 359
+ DE+H LKN +AK L ++ + LL++GTP + EL+ L + PD + +
Sbjct: 869 VIDEAHKLKNREAK----LLQVLHGFTWDSCLLMTGTPLQNGVFELWCLLNFIEPDKFPS 924
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
E+ + + G + Q A HE+L M+RR+K+DV +P K ++ +DV
Sbjct: 925 QQEFYDEF--GDLNTAEQVAQLHEQLR-----PYMLRRVKEDVEKSIPPK--EETIVDVE 975
Query: 420 EKDMRQIY--ALFRE---------------LEVVKGKIKAC-------KSEEEVQSLKFT 455
M++ Y A+F L V+ +++ C + E+ + + F
Sbjct: 976 LTTMQKKYYRAIFERNRQFLNMGATGTVANLVNVEMELRKCCNHPFLIRGVEDKECVGFD 1035
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVI-EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
E+ L KI ++ + +LD L T + K LIF+ + MLD I + +
Sbjct: 1036 EQ-LRMKILIQASGKTV--LLDKLLTKFRQENKKVLIFSQFKIMLDIIEDMCQLRGYSME 1092
Query: 515 RIDGGTPPASRQALVTEFQEKD-DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
R+DG SRQA + F D D A +LS +AGGVG+ L AAS VI + W P + +
Sbjct: 1093 RLDGSVRGNSRQAAIDRFNSPDSDTFAFLLSTRAGGVGINLIAASVVILFDSDWNPQNDL 1152
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
QA R HRIGQ SVN+Y L+ T + ++++ KL
Sbjct: 1153 QAVARCHRIGQTQSVNIYRLVTKKTYEAQMFEIASKKL 1190
>gi|148697110|gb|EDL29057.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_c [Mus
musculus]
Length = 1087
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 227/469 (48%), Gaps = 49/469 (10%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 244 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 300
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 301 PSLRVICF--VGDKDVRAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 353
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 354 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 411
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 412 DFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 466
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 467 MQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 524
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 525 HIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHE 584
Query: 524 SRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAHRI
Sbjct: 585 EREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 644
Query: 583 GQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
GQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 645 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 693
>gi|119632239|gb|EAX11834.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_b [Homo
sapiens]
Length = 1029
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 230/471 (48%), Gaps = 53/471 (11%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 170 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 226
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 227 PSLRVICF--VGDKDARAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 277
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 278 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 335
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 336 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 391
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 392 -KMQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 448
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 449 DEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTP 508
Query: 522 PASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAH
Sbjct: 509 HEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 568
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
RIGQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 569 RIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 619
>gi|262050608|ref|NP_444353.3| probable global transcription activator SNF2L1 [Mus musculus]
gi|81911462|sp|Q6PGB8.1|SMCA1_MOUSE RecName: Full=Probable global transcription activator SNF2L1;
AltName: Full=ATP-dependent helicase SMARCA1; AltName:
Full=DNA-dependent ATPase SNF2L; AltName:
Full=Nucleosome-remodeling factor subunit SNF2L;
AltName: Full=SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 1
gi|34783716|gb|AAH57115.1| Smarca1 protein [Mus musculus]
Length = 1046
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 230/471 (48%), Gaps = 53/471 (11%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 203 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 259
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 260 PSLRVICF--VGDKDVRAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 310
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 311 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 368
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 369 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 424
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 425 -KMQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 481
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 482 DEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTP 541
Query: 522 PASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAH
Sbjct: 542 HEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 601
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
RIGQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 602 RIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 652
>gi|410304364|gb|JAA30782.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1041
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 227/469 (48%), Gaps = 49/469 (10%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 199 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 255
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 256 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 308
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 309 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 366
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 367 DFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 421
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 422 MQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 479
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 480 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 539
Query: 524 SRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAHRI
Sbjct: 540 EREEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 599
Query: 583 GQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
GQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 600 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 648
>gi|403225017|ref|NP_001258119.1| probable global transcription activator SNF2L1 [Rattus norvegicus]
Length = 1062
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 227/471 (48%), Gaps = 53/471 (11%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATCFRDV----WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ + P ++L P S +W ++W+
Sbjct: 203 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNFPGPHMVLVPKSTLHNWMNEFKRWV--- 259
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 260 PSLRVICF--VGDKDVRAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 310
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 311 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 368
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 369 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 424
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 425 -KMQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 481
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 482 DEHIVSNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTP 541
Query: 522 PASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAH
Sbjct: 542 HEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 601
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
RIGQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 602 RIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 652
>gi|298714024|emb|CBJ27256.1| probable chromatin remodelling complex ATPase chain [Ectocarpus
siliculosus]
Length = 1563
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 235/486 (48%), Gaps = 61/486 (12%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRD----VW 217
Q P+ + +Q +G+ + + G +LADEMGLGKT+Q+I++ RD
Sbjct: 251 QPPSISGGTMRSYQLEGLNWMVNLQAQGTNGILADEMGLGKTLQSISILAYMRDFQNVTG 310
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
P +IL P S+ +W +++ +I V+ +L G+ + ++ K P D
Sbjct: 311 PHIILLPKSVLGNWQLEFKRFC----PDIRVL--RLSGTKDERAATIRNDLKPGSPEDER 364
Query: 278 ---FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
+ +Y+V + L ++ +I DE+H LKN + + + QY LLL+
Sbjct: 365 DWDVLVTTYEVANIEKTYLNKIGWRYLIIDEAHRLKNESSLFSMTVRELT--TQYRLLLT 422
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE-----LHNLM 389
GTP + EL+ L L P V+++ + VF + ++ ++ LH ++
Sbjct: 423 GTPLQNNLHELWALLNFLLPTVFQDSEAFSK------VFDLNVDDADKKQNMIKQLHKIL 476
Query: 390 KATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKG--------- 438
+ M+RRLKK+V LP K +F ++E R++Y L R+++ + G
Sbjct: 477 RP-FMLRRLKKEVEKSLPPKEETILFTSMSEV-QRKVYKGVLMRDIDTINGTSAGRTAIL 534
Query: 439 ----KIKACKS------EEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GC 487
+++ C + E ++L ++L+ K+ +LD L T ++A G
Sbjct: 535 NIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENC------GKM-ILLDKLLTRLKAAGH 587
Query: 488 KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMK 546
+ L+F+ M+D + L ++ RIDG TP +RQ L+ E+ K +LS +
Sbjct: 588 RVLVFSQMTRMMDILEDLMHMREYKYCRIDGNTPHDTRQDLIEEYNAPGSEKFIFLLSTR 647
Query: 547 AGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDV 606
AGG+G+ L +A T I + W P +QA+DR HRIGQ +V VY L+ DT+++ V +
Sbjct: 648 AGGLGINLQSADTCILYDSDWNPQADLQAQDRCHRIGQTKTVKVYRLVTEDTIEEKVVER 707
Query: 607 VRSKLE 612
+ KL+
Sbjct: 708 AQQKLK 713
>gi|169342801|ref|ZP_02863835.1| helicase, SNF2/RAD54 family [Clostridium perfringens C str. JGS1495]
gi|169299058|gb|EDS81130.1| helicase, SNF2/RAD54 family [Clostridium perfringens C str. JGS1495]
Length = 1084
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 237/506 (46%), Gaps = 64/506 (12%)
Query: 148 RAIASASAAPDLREKYD-------QIPAHIESKLLPFQRDGVRF--ALQH---GGRILLA 195
R I +L+ K+ ++P +++ L +Q+ G + L+H GG +L
Sbjct: 587 RYIKGKKKLNELKSKFKNINKLSFEVPKDLKANLREYQKFGYNWLKTLEHLGLGG--ILG 644
Query: 196 DEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG 255
DEMGLGKT+QAI + L++ P+SL +W +++ P+ +V VL++ G
Sbjct: 645 DEMGLGKTLQAITFILSNKGK-KTLVVAPTSLIYNWK---EEFNKFAPNLVVEVLNE-GK 699
Query: 256 SNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHF 308
R + L +I S DV++ N+L NF DE+
Sbjct: 700 DKRE---------------EALRDIESKDVIITTYNLLKRDLEEYKKINFDYCFIDEAQA 744
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
+KN ++ + A + ++Y L+GTP + +EL+ + + P + + RY
Sbjct: 745 IKNPDSQNSEAVKEV--NSEYKFALTGTPMENSLMELWSIFDFVMPGYLYDRKRFTVRYY 802
Query: 369 KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA 428
K + + E+H+L+K ++ RR KKDV+ +LP K + +D+ E D +++Y+
Sbjct: 803 KK----LNESEEVLSEIHSLIKPFIL-RRKKKDVIKELPDKIEKMHLVDLGE-DQKKVYS 856
Query: 429 LFRE------------LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVL 476
++ E K KI+ +++ L IN +SA KI ++
Sbjct: 857 IYANNALSIMEKKQDAEEFNKSKIEILSYITKLRQLALDPAVTINDYMGESA--KIEVLV 914
Query: 477 DYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD 536
+ L IE G K L+F+ +L I ++K+ +DG R +V EF E +
Sbjct: 915 EILNQGIEEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGE 974
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN 596
+ ++S+KAGG GL LT+A VI + W P QA DRAHRIGQ + V V L+A
Sbjct: 975 N-SVFLISLKAGGTGLNLTSADIVIHFDPWWNPAVENQATDRAHRIGQKNVVEVIKLIAK 1033
Query: 597 DTVDDIVWDVVRSKLENLGQVLDGHE 622
T+++ V + K E + ++++ E
Sbjct: 1034 GTIEEKVVALQEEKKELISKIIEEGE 1059
>gi|148697109|gb|EDL29056.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_b [Mus
musculus]
Length = 1110
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 230/471 (48%), Gaps = 53/471 (11%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 251 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 307
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 308 PSLRVICF--VGDKDVRAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 358
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 359 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 416
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 417 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 472
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 473 -KMQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 529
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 530 DEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTP 589
Query: 522 PASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAH
Sbjct: 590 HEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 649
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
RIGQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 650 RIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 700
>gi|351697662|gb|EHB00581.1| Putative global transcription activator SNF2L1, partial
[Heterocephalus glaber]
Length = 996
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 232/481 (48%), Gaps = 61/481 (12%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 141 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 197
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F IP + + SY++V+K +++ +++ V
Sbjct: 198 PSLRVICF--VGDKDARAAFI-----CDEMIPGEWDVCVTSYEMVIKEKSVFKKFHWRYV 250
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 251 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSD 308
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + FG + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 309 DFDSWFDTKNCFGDQKLV---ERLHAVLKP-FLLRRIKTDVERSLPPKKEIKIYLGLS-K 363
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 364 MQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 421
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 422 HIVSNSGKMVVLDKLLSRLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 481
Query: 524 SRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWTPG 570
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W P
Sbjct: 482 EREDKFLEVELLGQREAIEAFNVPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 541
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENS 624
+QA DRAHRIGQ V V+ L+ +DTV++ + + KL G+++D N
Sbjct: 542 VDLQAMDRAHRIGQKKPVRVFRLITDDTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 601
Query: 625 L 625
L
Sbjct: 602 L 602
>gi|317419683|emb|CBN81720.1| Helicase SRCAP [Dicentrarchus labrax]
Length = 429
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 212/437 (48%), Gaps = 55/437 (12%)
Query: 193 LLADEMGLGKTIQAIAVAT---CFRDVW-PVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
+LADEMGLGKTIQ IA+ C + W P LI+ P+S+ L+W +++W P +I+
Sbjct: 9 ILADEMGLGKTIQTIALLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRW--CPGFKILT 66
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN--IISYDVVLKLQNILMSSNFKIVIADES 306
GS + TK N F+ I SY +VL+ +++ +I DE+
Sbjct: 67 YF----GSQKERKLKRQGWTKPNA-----FHVCITSYKLVLQDHQAFRRKSWRYLILDEA 117
Query: 307 HFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNR 366
+KN +++R + L + LLL+GTP + +EL+ + L P V+++ E+
Sbjct: 118 QNIKNFKSQRWQSLLNF--NSHRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREF-KE 174
Query: 367 YCKGGVFGIYQGASNHEE-----LHNLMKATVMIRRLKKDVLAQLPVK----------RR 411
+ + G+ +G+ + E LH +++ ++RR+K DV Q+P K +R
Sbjct: 175 WFSNPLTGMIEGSQEYNEGLVKRLHKVLRP-FLLRRIKIDVEKQMPKKYEHVVRCRLSKR 233
Query: 412 QQVFLD--VAEKDMRQIYALFRELEVVKGKI---KACK-----SEEEVQSLKFTEKNLIN 461
Q+ D +A+ R+ A + V+ + K C +QS T+ + +
Sbjct: 234 QRFLYDDFMAQASTRETLASGHFMSVINILMQLRKVCNHPNLFDPRPIQSPFITQPIVFH 293
Query: 462 --KIYTDSAEAKIPAVLDYLETVIE----AGCKFLIFAHHQPMLDAIHQLFLKKKVHC-I 514
+ D+ E P L L T++ G + LIF MLD + Q FL H +
Sbjct: 294 TASLVQDALEVS-PLKLQTLHTLLRKLKTGGHRVLIFTQMTRMLDVLEQ-FLNYHGHIYL 351
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
R+DG T RQAL+ F + +LS ++GGVG+ LT A TV+F + W P Q
Sbjct: 352 RLDGSTRVEQRQALMERFNADRRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQ 411
Query: 575 AEDRAHRIGQVSSVNVY 591
A+DR HRIGQ V++Y
Sbjct: 412 AQDRCHRIGQTRDVHIY 428
>gi|338729558|ref|XP_003365923.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Equus caballus]
Length = 1045
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 227/469 (48%), Gaps = 49/469 (10%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 202 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 258
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 259 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 311
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 312 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 369
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 370 DFDSWFDTKNCLGDQKLV---ERLHTVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 424
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 425 MQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 482
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 483 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 542
Query: 524 SRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAHRI
Sbjct: 543 EREEAIEAFNVPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 602
Query: 583 GQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
GQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 603 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 651
>gi|119632238|gb|EAX11833.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_a [Homo
sapiens]
Length = 946
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 227/469 (48%), Gaps = 49/469 (10%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 121 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 177
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 178 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 230
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 231 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 288
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 289 DFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 343
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 344 MQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 401
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 402 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 461
Query: 524 SRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAHRI
Sbjct: 462 EREEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 521
Query: 583 GQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
GQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 522 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 570
>gi|14028667|gb|AAK52453.1|AF325920_1 DNA-dependent ATPase SNF2L [Mus musculus]
Length = 1064
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 230/471 (48%), Gaps = 53/471 (11%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 204 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 260
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 261 PSLRVICF--VGDKDVRAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 311
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 312 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 369
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 370 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 425
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 426 -KMQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 482
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 483 DEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTP 542
Query: 522 PASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAH
Sbjct: 543 HEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 602
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
RIGQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 603 RIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 653
>gi|340349785|ref|ZP_08672788.1| hypothetical protein HMPREF9419_1019 [Prevotella nigrescens ATCC
33563]
gi|339609988|gb|EGQ14849.1| hypothetical protein HMPREF9419_1019 [Prevotella nigrescens ATCC
33563]
Length = 1345
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 244/475 (51%), Gaps = 49/475 (10%)
Query: 166 IPAHIESKLLPFQRDGVRF---ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
+P + ++L +Q +G + G + LAD+MGLGKT+Q IA+ L++
Sbjct: 885 VPNTLNAQLRDYQEEGFEWLSKVTSWGAGVCLADDMGLGKTLQTIALLLEQSSKGASLVV 944
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRS--------GFTIVSSNTKRNIPL 274
P+S+ +W ++++ P+ V+VL+Q NR+ G +V++ T NI
Sbjct: 945 APASVVPNWRNELRRF---APTLNVIVLNQ--SDNRTADIDKVQAGDVVVTTYTLLNIE- 998
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
Q IL++ + +V DE+H +KNA K + A + + KA+ ++L+
Sbjct: 999 ---------------QKILVTREWNVVCLDEAHTIKNANTKMSKAAMQL--KARRKVILT 1041
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK--AT 392
GTP + EL+ + + P + + ++ ++ + +G ++ E L + A
Sbjct: 1042 GTPIQNHLSELWNLFQFINPGLLGSAEQFKQKFIQP-----IEGNNDKERQSQLRRLIAP 1096
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL--EVVK-GKIKACKSEEEV 449
++RR K +V+ +LP K Q+ ++++ ++ +Y ++R++ E+V+ K + E+
Sbjct: 1097 FLLRRTKGEVIKELPDKTDIQLPVELSSNEI-TMYEMYRKMVEELVRTDKSLNVSTLAEI 1155
Query: 450 QSLK--FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFL 507
L+ +L++K + +K+ A +D E++ ++G + L+F+ L+ +
Sbjct: 1156 TKLRQMACSCSLVDKSWK-VPSSKLLAFIDLAESLNDSGNRALVFSQFTSFLEEVRYAMD 1214
Query: 508 KKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSW 567
++ + +DG TP A R+ LV +FQ ++S+KAGG+GL LT A+ V+ + W
Sbjct: 1215 NAQLPYLYLDGSTPMAKREQLVKDFQS-GRCPFFLISLKAGGLGLNLTGANYVVHLDPWW 1273
Query: 568 TPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
P QA DRA+RIGQ V VY+L++ T+++ + + ++K + +L+G +
Sbjct: 1274 NPAIEQQATDRAYRIGQQQDVTVYHLISQHTIEEKILRLHKTKRDLADSLLEGSD 1328
>gi|254569384|ref|XP_002491802.1| Member of the imitation-switch (ISWI) class of ATP-dependent
chromatin remodeling complexes [Komagataella pastoris
GS115]
gi|238031599|emb|CAY69522.1| Member of the imitation-switch (ISWI) class of ATP-dependent
chromatin remodeling complexes [Komagataella pastoris
GS115]
Length = 1061
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 233/489 (47%), Gaps = 58/489 (11%)
Query: 162 KYDQIPAHIESKLLPFQRDGVRFALQ-HGGRI--LLADEMGLGKTIQAIAVATCFRDV-- 216
++ + P ++ KL P+Q G+ + +Q + ++ +LADEMGLGKT+Q I+ R +
Sbjct: 139 EFTESPGYVNGKLRPYQIQGLNWLVQLYENKLSGILADEMGLGKTLQTISFLGYLRYLKG 198
Query: 217 --WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P S +WA ++W E+ VL Q R T + +
Sbjct: 199 INGPHLVVVPKSTLDNWAREFKRW----TPEVKTVLLQGDKDQR---TTIIQDELMTCNF 251
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
D L I SY++V++ ++ L N+ ++ DE+H +KN ++ + K++ LL++
Sbjct: 252 DVL--ISSYEIVIREKSSLRKFNWDYIVIDEAHRIKNEESLLSQIIRMFHSKSR--LLIT 307
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE----------- 383
GTP + EL+ L + PD++ + + + +GG G N +
Sbjct: 308 GTPLQNNLHELWALLNFILPDIFSDSDTFDQWFGRGG-----DGDENDDKSEKNDQGSVV 362
Query: 384 -ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDM-RQIYA--LFRELEVVKGK 439
+LH +++ ++RR+K DV L K+ V++ ++ DM RQ Y L ++++ V
Sbjct: 363 QQLHKVLQP-FLLRRIKSDVEKSLLPKKEVNVYVGMS--DMQRQWYQKILEKDIDAVVSS 419
Query: 440 IKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVI 483
+S+ + ++ + N Y + AE P D L+
Sbjct: 420 SGKKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPFTTDEHLVFNAQKMKVLDKLLKRKK 479
Query: 484 EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-V 542
E G + LIF+ MLD + ++ RIDG T + R + ++ KD K +
Sbjct: 480 EQGSRVLIFSQMSRMLDILEDYCNFREYGYCRIDGQTDHSDRIDAIDDYNRKDSDKFVFL 539
Query: 543 LSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDI 602
L+ +AGG+G+ LT+A TVI + W P +QA DRAHRIGQ V VY L+ + +++
Sbjct: 540 LTTRAGGLGINLTSADTVILYDSDWNPQADLQAMDRAHRIGQTKQVYVYRLVTENAIEEK 599
Query: 603 VWDVVRSKL 611
V + + KL
Sbjct: 600 VLERAQQKL 608
>gi|26326731|dbj|BAC27109.1| unnamed protein product [Mus musculus]
Length = 1046
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 230/471 (48%), Gaps = 53/471 (11%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 203 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 259
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 260 PSLRVICF--VGDKDVRAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 310
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 311 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 368
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 369 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 424
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 425 -KMQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMHLRKCCNHPYLFDGAEPGPPYTT 481
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 482 DEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTP 541
Query: 522 PASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAH
Sbjct: 542 HEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 601
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
RIGQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 602 RIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 652
>gi|195124269|ref|XP_002006616.1| GI18484 [Drosophila mojavensis]
gi|193911684|gb|EDW10551.1| GI18484 [Drosophila mojavensis]
Length = 603
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 221/478 (46%), Gaps = 48/478 (10%)
Query: 163 YDQIPAHI-ESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDV-- 216
+D P I KL +Q G+ + + ++G +LADEMGLGKT+Q I++ R+V
Sbjct: 29 FDASPTFIVNGKLRDYQLRGLNWLILLYENGINGILADEMGLGKTLQTISLLGYIRNVKH 88
Query: 217 --WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P S +W + W P +++ + G ++ TI + +N +
Sbjct: 89 QAGPHLVVAPKSTLANWMNEFEHW--CPSLKVICFI----GDKKTRKTI-KAKMPKNEKV 141
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
+ SYD+ L+ ++ L S +++ ++ DE H +KN A + + LLL+
Sbjct: 142 KWDVCVTSYDMCLRERSFLKSFSWQYLVIDEGHRIKNENALISGKVREF--HSTNRLLLT 199
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG--IYQGASNHEELHNLMKAT 392
GTP + EL+ L L PDV+ + ++ + G + G LH ++K
Sbjct: 200 GTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNSCLGDDVLVG-----RLHAVIKP- 253
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACK---SEEEV 449
++RRLK +V A L K+ +++ ++ R +R+L + + C S+ V
Sbjct: 254 FLLRRLKSEVEANLLPKKEVNIYVGLS----RMQREWYRKLLLNDIDVMTCYGTISKMRV 309
Query: 450 QSLKFTEKNLINKIYTDSAEAKIPAVLD---------------YLETVIEAGCKFLIFAH 494
++ + +N Y ++P D L + E G + LIF+
Sbjct: 310 MNIIMQLRKCVNHPYLFEGVEELPYTTDSNLLKNSGKMLILDKLLMKLQEQGSRVLIFSQ 369
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLT 553
MLD + +K R+DG TP R L+ E+ ++ K +LS +AGG+G+
Sbjct: 370 MTRMLDILEDYCNWRKFDYCRLDGQTPHEDRDKLIREYNMENSPKFIFMLSTRAGGLGIN 429
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
L A VI + W P +QA DRAHRIGQ V V+ L+A TVD+ + + KL
Sbjct: 430 LATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLIAEKTVDEKILEHANIKL 487
>gi|301766464|ref|XP_002918637.1| PREDICTED: probable global transcription activator SNF2L1-like
isoform 2 [Ailuropoda melanoleuca]
Length = 1042
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 227/469 (48%), Gaps = 49/469 (10%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 199 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWV--- 255
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 256 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 308
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 309 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 366
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 367 DFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 421
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 422 MQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 479
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 480 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 539
Query: 524 SRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAHRI
Sbjct: 540 EREEAIEAFNVPNSNKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 599
Query: 583 GQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
GQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 600 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 648
>gi|148697108|gb|EDL29055.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_a [Mus
musculus]
Length = 1103
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 230/471 (48%), Gaps = 53/471 (11%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 244 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 300
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 301 PSLRVICF--VGDKDVRAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 351
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 352 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 409
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 410 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 465
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 466 -KMQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 522
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 523 DEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTP 582
Query: 522 PASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAH
Sbjct: 583 HEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 642
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
RIGQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 643 RIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 693
>gi|377556737|ref|ZP_09786423.1| Putative helicase [Lactobacillus gastricus PS3]
gi|376167670|gb|EHS86500.1| Putative helicase [Lactobacillus gastricus PS3]
Length = 635
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 231/491 (47%), Gaps = 68/491 (13%)
Query: 166 IPAHIESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAV--ATCFRDVWP 218
+P +++KL P+Q G ++ L H GG LLADEMGLGKTIQ I + A P
Sbjct: 166 VPQDLQAKLRPYQIAGFQWLMTLNHYHFGG--LLADEMGLGKTIQIITLLLAINQEQKLP 223
Query: 219 VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
L++ P+S+ +W ++ PS + ++ LGG +++ + + ++
Sbjct: 224 SLVVAPASVVYNWQ---DEFHKFAPS---LKIATLGGGKVERRKLLAKSDQYDV------ 271
Query: 279 NIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRT--AATLPIIKKAQYALLLSGT 336
I SYD + + + F++ I DE+ +KNA RT A T+ +I AQ L+GT
Sbjct: 272 FITSYDSLKRDIALYDQLEFQVQIIDEAQTIKNA---RTIGAQTVKLIH-AQQRFALTGT 327
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIR 396
P +R EL+ + L P + R+ + +F Q + +L L+ V+ R
Sbjct: 328 PIENRLSELWSIFDYLMPGFLGTYQHFSKRFEEPIIFNDDQ--AKRAQLSQLIGPFVL-R 384
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTE 456
RLKKDVL LP K ++ E + E+ V+ K+ ++++ ++ ++ ++
Sbjct: 385 RLKKDVLTSLPAKT------EIVE---------YAEMSGVQLKLYRARADQLIKRIQTSD 429
Query: 457 KNLINK---------------------IYTD--SAEAKIPAVLDYLETVIEAGCKFLIFA 493
+ +Y D AK+ + ++ IE G K L+F+
Sbjct: 430 ETDFKGDKIEILAELTRLRQVCCDPHLVYDDYKGKSAKLSQTIALIKDQIENGHKILLFS 489
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLT 553
MLD I Q K+++ I G RQ V +F E+D+ ++S+KAGG G+
Sbjct: 490 QFTSMLDIIAQRLQKERIQTETITGAVDKQERQRRVKQFNEQDEPAVFLISLKAGGTGIN 549
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLEN 613
LT+A VI + W QA DRAHRIGQ + V +Y ++ T+++ + ++ K
Sbjct: 550 LTSADVVIHYDPWWNAAAQNQATDRAHRIGQENPVTIYQMITKHTIEERIKELQDKKQAL 609
Query: 614 LGQVLDGHENS 624
QVL G + S
Sbjct: 610 ADQVLSGDQMS 620
>gi|389584766|dbj|GAB67498.1| helicase [Plasmodium cynomolgi strain B]
Length = 1291
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 138/508 (27%), Positives = 226/508 (44%), Gaps = 60/508 (11%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWP 218
L E ++P I+ +LP+Q + V F Q GRIL+ DEMGLGKT+QAI + FR ++P
Sbjct: 388 LEEIKKKLPKRIQKVILPYQLESVYFFKQQNGRILIGDEMGLGKTLQAICIFHFFR-LYP 446
Query: 219 VLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
LI+TPSSL+L+WA I++++ PS+++VV GGSN + R L +
Sbjct: 447 TLIVTPSSLKLNWACEIEKFVPAFDPSKVLVV----GGSN---------DFPRGARLYRI 493
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPII----KKAQYALLL 333
I+S+++ KL +++ FK++I DESHF++ + + +I KK + + L
Sbjct: 494 I-IVSFELYKKLAHLINEIKFKLIIVDESHFIRTVHYGKQSQLAKMIKSTLKKTKNVIFL 552
Query: 334 SGTPALSRPIELFKQLEALYPD---VYKNVHEYGNRYCKGGVF---GIYQGASNHEELHN 387
SGTP+++RPI ++ Q++ L KN +G +CK IY+ E H
Sbjct: 553 SGTPSINRPINIYHQIKYLINSKKIFCKNKFTFGEEFCKKYFCRGQKIYEENLRSWEFHL 612
Query: 388 LMKATVMIRRLKKDVL-AQLPVKRRQQVFL-----DVAEKDMRQIYA-----LFRELEVV 436
+K TVMIRR +V + P +R V+L + ++ + E +
Sbjct: 613 FLKKTVMIRRSISEVFTSSFPDLKRFFVYLPHGPYTIGTDNLVNFLSPSLCPPSEEENAL 672
Query: 437 KGKIKACKSEEEVQSLKFTEKNL----------INKIYTDSAEAKIPAVLDYLETVIEAG 486
+ +K K + FT N I + +K+ + Y+E G
Sbjct: 673 QNVVKDSKEGTQSVGSDFTTPNRQALSEFFQVQIKSKKVEEGLSKVVHAMKYMEEHF-PG 731
Query: 487 CKFLIFAHHQPMLDAIHQLFL-----KKKVHCIRID-----GGTPPASRQALVTEFQEKD 536
K +IF +H + I + L KKK ID G ++ + F+
Sbjct: 732 KKKIIFCYHLTVCKCIEEELLKMIKSKKKSEQAIIDYVVLKGSLSEKEKREKIQFFRMNH 791
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN 596
+ + ++ + GL T + F E L Q E R R Q + V+Y L
Sbjct: 792 SCQYGIFTICSVSHGLDFTFCNLCFFLEFPVNFFHLQQCESRLFRKNQQFNTYVFYFLLK 851
Query: 597 DTV--DDIVWDVVRSKLENLGQVLDGHE 622
+ + D W + ++DG E
Sbjct: 852 NGLGSDYKTWKRFTLCAHSTRSIVDGTE 879
>gi|211828096|gb|AAH51825.2| SMARCA1 protein [Homo sapiens]
Length = 965
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 227/469 (48%), Gaps = 49/469 (10%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 136 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 192
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 193 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 245
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 246 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 303
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 304 DFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 358
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 359 MQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 416
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 417 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 476
Query: 524 SRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAHRI
Sbjct: 477 EREEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 536
Query: 583 GQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
GQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 537 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 585
>gi|423136634|ref|ZP_17124277.1| hypothetical protein HMPREF9942_00415 [Fusobacterium nucleatum subsp.
animalis F0419]
gi|371961788|gb|EHO79412.1| hypothetical protein HMPREF9942_00415 [Fusobacterium nucleatum subsp.
animalis F0419]
Length = 1088
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 145/501 (28%), Positives = 242/501 (48%), Gaps = 46/501 (9%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQH-----GGRILLADEMGLGKTIQAIAVATCF 213
+K ++IPA + L +Q GV + L+ GG +LAD+MGLGKT+Q I
Sbjct: 617 FEQKIEEIPAKYKKILREYQIVGVEWMLKLRSMNLGG--ILADDMGLGKTLQVITYLESV 674
Query: 214 RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
+ P LI+TP+SL L+W ++ + V +LS G +R + SN K +
Sbjct: 675 KRERPCLIITPASLILNWENEFNKF-----NSSVSILSIYG--DRKNREELLSNLKNEVV 727
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
I SYD + + ++ + F +I DE+ ++KN + K A T+ I +++ L L
Sbjct: 728 ------ITSYDYLKRDIDLYENIEFDTIILDEAQYIKNHKTK-AAQTVKKIN-SEFKLAL 779
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNH-EELHNLMKAT 392
+GTP + E++ + L N + Y + V Q N E L N+++
Sbjct: 780 TGTPLENSLAEIWSIFDFLMSGYLFNYDYFYKNYERAIVL---QAEKNVIERLKNMVEPF 836
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDV--AEKDMRQIY------ALFRELEVVKGKIKACK 444
++ RRLKKDVL +LP K + F+++ EK++ Q L + ++V KI+
Sbjct: 837 IL-RRLKKDVLKELPEKIEETYFVEMNQEEKNLYQANLVKINETLAQSIDVNTNKIEVLA 895
Query: 445 SEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
+++ + + L I S+ +KI A ++ ++ IE + L+F+ +LD + Q
Sbjct: 896 MLTKLRQICIDPRLLYEDI--SSSSSKINACIELIKKSIENKQRILLFSSFTTVLDLVAQ 953
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
+ + G T R LV +FQ + V ++S+KAGG GL LT AS VI +
Sbjct: 954 ECDNLSIPYFMLTGETNKVKRNQLVEDFQ-NEVVPLFLISLKAGGTGLNLTKASVVIHLD 1012
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 624
W QA DRAHRIGQ +V V+ L+ +T+++ + ++ K E ++ + S
Sbjct: 1013 PWWNISAQNQATDRAHRIGQEDTVQVFNLITKNTIEEKILNLQNKKKELSDIFVENSKGS 1072
Query: 625 LEVSSSQIRSSPAKQKTLDSF 645
SS K++ LD F
Sbjct: 1073 F--------SSLTKEELLDLF 1085
>gi|348552948|ref|XP_003462289.1| PREDICTED: LOW QUALITY PROTEIN: probable global transcription
activator SNF2L1-like [Cavia porcellus]
Length = 1048
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 245/500 (49%), Gaps = 57/500 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATC---FR 214
+++ P++++ L +Q G+ + + ++G +LADEMGLGKT+Q IA+ +R
Sbjct: 176 RFEVSPSYVKGGALRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYR 235
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-RSGFTIVSSNTKRNI 272
+ P ++L P S +W ++W+ PS V+ +G + R+ F R+
Sbjct: 236 SIPGPHMVLVPKSTLHNWMNEFKRWV---PSLRVICF--VGDKDARAAFI-------RDE 283
Query: 273 PLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
+ G +++ SY++V+K +++ +++ ++ DE+H +KN ++K + K+
Sbjct: 284 MMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF--KSTNR 341
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
LLL+GTP + EL+ L L PDV+ + ++ + + FG + E LH ++K
Sbjct: 342 LLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCFGDQKLV---ERLHAVLK 398
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
++RR+K DV LP K+ +++L ++ K R+ Y L ++++V+ K K
Sbjct: 399 P-FLLRRIKTDVEKSLPPKKEIKIYLGLS-KMQREWYTKILMKDIDVLNSAGKMDKMR-- 454
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIF 492
+ ++ + N Y D AE P D L + + G + LIF
Sbjct: 455 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLARLKDQGSRVLIF 514
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVG 551
+ +LD + + + R+DG TP R+ + F + K +LS +AGG+G
Sbjct: 515 SQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNSSKFIFMLSTRAGGLG 574
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ L +A VI + W P +QA DRAHRIGQ V V+ L+ ++TV++ + + KL
Sbjct: 575 INLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKL 634
Query: 612 E------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 635 RLDSIVIQQGRLIDQQSNKL 654
>gi|149060085|gb|EDM10901.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 (predicted) [Rattus
norvegicus]
Length = 985
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 227/471 (48%), Gaps = 53/471 (11%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATCFRDV----WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ + P ++L P S +W ++W+
Sbjct: 126 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNFPGPHMVLVPKSTLHNWMNEFKRWV--- 182
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 183 PSLRVICF--VGDKDVRAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 233
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 234 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 291
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 292 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 347
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 348 -KMQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 404
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 405 DEHIVSNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTP 464
Query: 522 PASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAH
Sbjct: 465 HEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 524
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
RIGQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 525 RIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 575
>gi|359412845|ref|ZP_09205310.1| SNF2 helicase associated domain protein [Clostridium sp. DL-VIII]
gi|357171729|gb|EHI99903.1| SNF2 helicase associated domain protein [Clostridium sp. DL-VIII]
Length = 1085
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 244/484 (50%), Gaps = 56/484 (11%)
Query: 158 DLREKYDQIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATC 212
+L K Q+P +++KL +Q++G + L GG +L+DEMGLGKT+Q I +
Sbjct: 609 NLEGKTFQLPHGLQAKLREYQKEGYNWLRTLDYLNFGG--ILSDEMGLGKTLQTITLLLS 666
Query: 213 FRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNI 272
+ LI+ P+SL +W + +++ PS ++G SN + R +
Sbjct: 667 -KSNSKTLIVAPTSLIYNWKSEFKKF---APS------MKIGISN-------GNKEDREV 709
Query: 273 PLDGLFNIISYDVVLKLQNIL------MSSNFKIVIADESHFLKNAQAKRTAATLPIIKK 326
+ N +YDV+L N+L F I DE+ +KN Q +A ++ IK
Sbjct: 710 LIK---NYENYDVILTTYNLLRRDIELYDMEFDYCILDEAQNIKN-QTSLSAKSVKDIK- 764
Query: 327 AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELH 386
A+ L+GTP + +EL+ + + P N ++ RY + + +G EEL+
Sbjct: 765 AKNRFALTGTPIENSLMELWSIFDFIMPGYLYNEKKFTTRYYRR----LEEGPEILEELN 820
Query: 387 NLMKATVMIRRLKKDVLAQLP--VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACK 444
L+K ++ RR KK+V+ +LP +++R V L +K + + YA + + ++++ K++ +
Sbjct: 821 RLVKPFIL-RRYKKNVIKELPDKIEKRLLVPLSDEQKVIYETYANYVK-DLIQKKVEDFE 878
Query: 445 -SEEEVQSLKFTEKNLINKIYTD---------SAEAKIPAVLDYLETVIEAGCKFLIFAH 494
++ +++ L + K + +I D KI A+++ LE G K L+F+
Sbjct: 879 FTKSKIEILSYITK--LRQICLDPSVTMDNYLGTSGKIDALIELLEQSAGEGHKILVFSQ 936
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
+L I ++ +K +DG P +R +V EF ++ ++S+KAGG GL L
Sbjct: 937 FTSVLKNIGRILREKNFMFSYLDGAVPSINRMKMVEEFNNGENT-VFLVSLKAGGTGLNL 995
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
T+A VI + W P QA DRAHRIGQ V V L+A+ T+++ + ++ SK E +
Sbjct: 996 TSADVVIHFDPWWNPAVEDQATDRAHRIGQKHVVEVIKLIASGTIEEKIVELQDSKRELI 1055
Query: 615 GQVL 618
++L
Sbjct: 1056 SKIL 1059
>gi|222528088|ref|YP_002571970.1| non-specific serine/threonine protein kinase [Caldicellulosiruptor
bescii DSM 6725]
gi|222454935|gb|ACM59197.1| Non-specific serine/threonine protein kinase [Caldicellulosiruptor
bescii DSM 6725]
Length = 1112
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 136/467 (29%), Positives = 236/467 (50%), Gaps = 46/467 (9%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQH------GGRILLADEMGLGKTIQAIAVATCFRD--V 216
+IP H++S L +Q+ GV++ L H GG +LAD+MGLGKT+Q ++ + +D
Sbjct: 642 EIPEHLDSMLREYQKVGVKW-LSHLYLNGFGG--ILADDMGLGKTVQVLSFISACKDKIA 698
Query: 217 WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDG 276
P L++ P+SL +W Q++ P + VVV G+ I+ + +I
Sbjct: 699 GPCLVVAPTSLVYNWQQETQKF--TPDLKTVVV----DGTPAKRSEIIENLKDYDIV--- 749
Query: 277 LFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
I SY ++ + ++ F + + DE+ +KN Q+ A I K +AL +GT
Sbjct: 750 ---ITSYSLLKRDIDLYKDLEFSVCVVDEAQHIKNPQSLSKEAVSRINAKCCFAL--TGT 804
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK--ATVM 394
P + EL+ + + P + R+ K + ++ + L L K A +
Sbjct: 805 PIENNLSELWSIFDFVLPGYLGTHTRFSERFEKP-----IEKQNDEKALKLLQKMIAPFV 859
Query: 395 IRRLKKDVLAQLP--VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC---KSEEEV 449
+RRLKKDVL++LP ++ +V + ++++ ++Y L + E +K +I KS+ ++
Sbjct: 860 LRRLKKDVLSELPEKIETNLEVNMTPEQENIYKLY-LLKAREDIKKEIDLKGFEKSKIKI 918
Query: 450 QSLKFTEKNLIN---KIYTDSAEA---KIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
S+ FT I K++ + E KI + LE VIE+G + ++F+ ML +
Sbjct: 919 FSI-FTRLRQICCHPKLFLQNYEGSSGKIELFEEILEDVIESGHRVVVFSQWVEMLKILE 977
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
+ +K +DG T R +V +F + ++S+KAGG GL LT A VI
Sbjct: 978 ERIKEKGFEYFYLDGSTKSEERIDMVNKFNSGQK-QVFLVSLKAGGFGLNLTGADVVILY 1036
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
+L W P QA DRAHRIGQ +SV V+ L+ +T+++ ++++ + K
Sbjct: 1037 DLWWNPAVENQAMDRAHRIGQENSVQVFRLITRNTIEERIFELQQKK 1083
>gi|168207158|ref|ZP_02633163.1| helicase, SNF2/RAD54 family [Clostridium perfringens E str. JGS1987]
gi|170661452|gb|EDT14135.1| helicase, SNF2/RAD54 family [Clostridium perfringens E str. JGS1987]
Length = 1084
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 239/506 (47%), Gaps = 64/506 (12%)
Query: 148 RAIASASAAPDLREKYD-------QIPAHIESKLLPFQRDGVRF--ALQH---GGRILLA 195
R I +L+ K+ ++P ++++L +Q+ G + L+H GG +L
Sbjct: 587 RYIKGKKKLNELKSKFKNINKLSFEVPKDLKAELREYQKFGYNWLKTLEHLGLGG--ILG 644
Query: 196 DEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG 255
DEMGLGKT+QAI + L++ P+SL +W +++ P+ +V VL++ G
Sbjct: 645 DEMGLGKTLQAITFILSNKGK-KTLVVAPTSLIYNWK---EEFNKFAPNLVVEVLNE-GK 699
Query: 256 SNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHF 308
R + L +I S DV++ N+L NF DE+
Sbjct: 700 DKRE---------------EALRDIESKDVIITTYNLLKRDLEEYKKINFDYCFIDEAQA 744
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
+KN ++ + A + ++Y L+GTP + +EL+ + + P + + RY
Sbjct: 745 IKNPDSQNSEAVKEV--NSEYKFALTGTPMENSLMELWSIFDFVMPGYLYDRKRFTVRYY 802
Query: 369 KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA 428
K + + E+H+L+K ++ RR KKDV+ +LP K + +D+ E + +++Y+
Sbjct: 803 KK----LNESEEVLSEIHSLIKPFIL-RRKKKDVIKELPDKIEKMHLVDLGE-EQKKVYS 856
Query: 429 LFRE------------LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVL 476
++ E K KI+ +++ L IN +SA KI A++
Sbjct: 857 IYANNALSIMEKKQDAEEFNKSKIEILSYITKLRQLALDPSVTINDYMGESA--KIEALV 914
Query: 477 DYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD 536
+ L IE G K L+F+ +L I ++K+ +DG R +V EF E +
Sbjct: 915 EILNQGIEEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGE 974
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN 596
+ ++S+KAGG GL LT+A VI + W P QA DRAHR+GQ + V V L+A
Sbjct: 975 N-SVFLISLKAGGTGLNLTSADIVIHFDPWWNPAVENQATDRAHRMGQKNVVEVIKLIAK 1033
Query: 597 DTVDDIVWDVVRSKLENLGQVLDGHE 622
T+++ V + K E + ++++ E
Sbjct: 1034 GTIEEKVVALQEEKKELISKIIEEGE 1059
>gi|291547356|emb|CBL20464.1| Superfamily II DNA/RNA helicases, SNF2 family [Ruminococcus sp.
SR1/5]
Length = 1130
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 233/482 (48%), Gaps = 51/482 (10%)
Query: 165 QIPAHIESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIA-VATCFRDVWP 218
QIP E L +Q++G + L+H GG +LAD+MGLGKT+Q + + + F++ P
Sbjct: 657 QIPREQEKILRGYQKEGFYWIKTLKHNQFGG--ILADDMGLGKTLQVLTFLWSEFQESAP 714
Query: 219 -----VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
L++TP+SL +W I+++ P+ +V G + ++ + +R +
Sbjct: 715 GENRRALVITPASLVFNWMNEIERFAPGLPATVVT------GDVKERKALIKNAGEREVL 768
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
I SYD++ + + +F + I DE+ ++KN + A I ++++ L L
Sbjct: 769 ------ITSYDLLKRDLKAYQNLDFAVQIIDEAQYIKNHGTQVAKAVKEI--RSEFRLAL 820
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV 393
+GTP +R EL+ + L P + ++ V Y ++ E L +++ V
Sbjct: 821 TGTPVENRLSELWSIFDFLMPGFLYSYEKFRKEIELPAV--QYSSSNAMERLQKMIRPFV 878
Query: 394 MIRRLKKDVLAQLPVKRRQQVF--LDVAEKDMRQIYA-LFR---------ELEVVKGKIK 441
+ RRLK+DVL LP K + +F L+ +K++ + + FR E K +I
Sbjct: 879 L-RRLKRDVLKDLPDKLEKDMFSPLESEQKELYEAHTERFRLMLGMQSDAEFRTSKLQIL 937
Query: 442 ACKSEEEVQSLK--FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
A E+ L+ L+ + Y ++ +K+ ++ ++ + G K L+F+ ML
Sbjct: 938 A-----EITRLRQICCYPGLVYEGYKGNS-SKLEMCMELVQNAVNGGHKILLFSQFTTML 991
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
D + K KV + G T R +V F E DD +S+KAGG GL LTAA
Sbjct: 992 DVLAVRLKKAKVSFYMLTGSTSKEKRAQMVHAFNE-DDTSVFCISLKAGGTGLNLTAADI 1050
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
VI + W QA DRAHRIGQ + V+VY L DT+++ + + K E ++L+
Sbjct: 1051 VIHYDPWWNLAVQNQATDRAHRIGQQNVVSVYRLFMKDTIEERIRALQERKRELADEILN 1110
Query: 620 GH 621
G
Sbjct: 1111 GE 1112
>gi|156383405|ref|XP_001632824.1| predicted protein [Nematostella vectensis]
gi|156219886|gb|EDO40761.1| predicted protein [Nematostella vectensis]
Length = 1022
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 235/481 (48%), Gaps = 55/481 (11%)
Query: 163 YDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAV---ATCFRD 215
+++ P +I+ ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ FR+
Sbjct: 132 FEESPNYIKGGEMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKNFRN 191
Query: 216 V-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG-SNRSGFTIVSSNTKRNIP 273
V P +++ P S +W A ++W PS V L +G R+ F R+
Sbjct: 192 VPGPHMVICPKSTLANWMAEFERWC---PSIRAVCL--IGNQEQRTAFI-------RDTM 239
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA- 330
L G +++ SY++V++ + + ++ ++ DE+H +KN ++K + I+++ + A
Sbjct: 240 LPGEWDVCVTSYEMVIREKAVFKKFAWRYIVIDEAHRIKNEKSKLSE----IVRELRSAN 295
Query: 331 -LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLM 389
LLL+GTP + EL+ L L PDV+ + ++ + + Q E LH+++
Sbjct: 296 RLLLTGTPLQNNLHELWALLNFLLPDVFSSSDDFDAWFNSNNLVEEKQLV---ERLHSVL 352
Query: 390 KATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEE 447
+ ++RRLK DV +L K+ +V+ + K R Y L ++++VV G K K
Sbjct: 353 RP-FLLRRLKSDVEKRLLPKKETKVYTGLT-KMQRSWYTKILMKDIDVVNGAGKTDKMR- 409
Query: 448 EVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLI 491
+ ++ + N Y D AE P D L + + G + LI
Sbjct: 410 -LLNILMQLRKCCNHPYLFDGAEPGPPYTTDVHLIENSGKMRVLDKLLARLKQEGSRVLI 468
Query: 492 FAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGV 550
F+ +LD + L ++ R+DG TP RQA + F K +LS +AGG+
Sbjct: 469 FSQMTRLLDILEDYCLWRQYDYCRLDGQTPHEERQAYINSFNMPGSTKFIFMLSTRAGGL 528
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
G+ L A VI + W P +QA DRAHRIGQ V V+ ++ TV++ + + K
Sbjct: 529 GINLATADIVILYDSDWNPQVDLQAMDRAHRIGQKKQVKVFRFISESTVEERIIERAEMK 588
Query: 611 L 611
L
Sbjct: 589 L 589
>gi|282857036|ref|ZP_06266287.1| helicase, SNF2/RAD54 family [Pyramidobacter piscolens W5455]
gi|282585197|gb|EFB90514.1| helicase, SNF2/RAD54 family [Pyramidobacter piscolens W5455]
Length = 1419
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 224/491 (45%), Gaps = 59/491 (12%)
Query: 149 AIASASAAPDLREKYDQI-------PAHIESKLLPFQRDGVRF--ALQH-GGRILLADEM 198
A+A+ L E++D+ P + ++L P+Q +G R+ L H G LAD+M
Sbjct: 929 ALAADKKWQQLCERFDEAQALAPEAPRTLRAQLRPYQLEGFRWLARLAHWGAGACLADDM 988
Query: 199 GLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNR 258
GLGKT+Q +A+ + P L+ P+S+ +W I++ P+ V+ G
Sbjct: 989 GLGKTVQTLALLLHRAEGGPALVAAPTSVCGNW---IEEAARFAPTLNVIDYRSAG---- 1041
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKN 311
+ + L + +DVVL +L S + V+ DE+ +KN
Sbjct: 1042 ----------REKV----LAALKPFDVVLASYGLLQSDAESFAQKRWHTVVLDEAQAVKN 1087
Query: 312 AQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGG 371
KR+AA + + + ++++GTP +R EL+ L P + ++ + R+
Sbjct: 1088 MSTKRSAAVMGL--HGDFRMIMTGTPIENRLSELWNLFRFLNPGLLGSLERFNRRFASP- 1144
Query: 372 VFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFR 431
+ G A ++RR+K+ VL LP + ++++ ++ R Y R
Sbjct: 1145 ---VAAGDDGARSRLRRAIAPFLLRRVKEQVLDDLPERTEVTRRVELSPQE-RAFYEALR 1200
Query: 432 ELEVVKGKIKACKSEEE-------VQSLKFTEKNLINKIYTDSAEAKIP-----AVLDYL 479
+ V+ A S EE Q +K + +D A IP A+L+ +
Sbjct: 1201 Q-SAVEAIDAAGNSPEEDKRFAVFAQLMKLRRCCCAVSLVSDGVGAAIPSSKLEALLELV 1259
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
+ + E+G + L+F+ L I + ++ V C+ +DG TPP R LV+ FQ
Sbjct: 1260 DELRESGHRALVFSQFTDHLRLIERALAERGVPCLYLDGSTPPGKRAELVSSFQSGRG-D 1318
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
++S++AGG GL LT A V+ + W P QA DRA+RIGQ V VY +A TV
Sbjct: 1319 CFLISLRAGGTGLNLTGADFVVHMDPWWNPAVEDQASDRAYRIGQTRPVTVYRFVAAHTV 1378
Query: 600 DDIVWDVVRSK 610
++ + ++ R K
Sbjct: 1379 EEKIVELHRRK 1389
>gi|443653954|ref|ZP_21131197.1| SNF2 family N-terminal domain protein [Microcystis aeruginosa
DIANCHI905]
gi|159028978|emb|CAO87439.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443333935|gb|ELS48471.1| SNF2 family N-terminal domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 1390
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 138/532 (25%), Positives = 251/532 (47%), Gaps = 43/532 (8%)
Query: 113 RLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIES 172
R F P LS + + ++ +NL QR S P ++P+ +++
Sbjct: 883 RFHPFAAPILSELSEEVGQLKADKRWRDNL----QRFQESQDFTP-------EVPSTLQA 931
Query: 173 KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+L +Q +G R+ Q G LAD+MGLGKT+QA+AV P L + P+S+ L
Sbjct: 932 ELRDYQLEGFRWLARLAQWGAGACLADDMGLGKTLQALAVILTRASEGPTLAIAPTSVCL 991
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK- 288
+W + +++ P I+ QLG +R R P D L + SY ++ +
Sbjct: 992 NWISEAERF--APTLNII----QLGTGDRQALL------DRLQPFDLL--VCSYGLLQQE 1037
Query: 289 -LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFK 347
+ +L ++ ++ DE+ +KN KR+ A + + + + L+ +GTP + EL+
Sbjct: 1038 EVATMLAGVEWRTIVLDEAQAIKNFSTKRSKAAMNL--RGDFKLITTGTPIENHLGELWN 1095
Query: 348 QLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLP 407
+ P + ++ + +R+ Y + E+L L++ ++RR K VLA+LP
Sbjct: 1096 LFRFINPGLLGSLESFDHRFATP--IEKYGDKTAREQLKKLVRP-FLLRRTKNQVLAELP 1152
Query: 408 VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL----KFTEKNLINKI 463
+ V ++++ ++ AL R + + + +Q L K ++
Sbjct: 1153 PRTEILVPIELSVEEKAFYEALRRRALEKLSESDSTAGAKHLQVLAEIMKLRRACCHPQL 1212
Query: 464 YT---DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
D A +K+ + L+ +++ K L+F+ L + ++++ +DG T
Sbjct: 1213 VAPDLDLAGSKLSRFAEILDELLDNQHKALVFSQFVDHLAIVRSYLDQRQIKYQYLDGST 1272
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P + RQ V FQ + ++S+KAGG GL LTAA VI + W P QA DRAH
Sbjct: 1273 PASDRQKQVKAFQAGEG-DVFLISLKAGGTGLNLTAADYVIHLDPWWNPAVEDQASDRAH 1331
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
RIGQ V +Y L+A DT+++ + D+ K + +L+G + S ++S+ ++
Sbjct: 1332 RIGQKRPVTIYRLVAKDTIEEKIVDLHHHKRDLADSLLEGTDASGKLSTDEL 1383
>gi|168217982|ref|ZP_02643607.1| helicase, SNF2/RAD54 family [Clostridium perfringens NCTC 8239]
gi|182379962|gb|EDT77441.1| helicase, SNF2/RAD54 family [Clostridium perfringens NCTC 8239]
Length = 1084
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 238/506 (47%), Gaps = 64/506 (12%)
Query: 148 RAIASASAAPDLREKYD-------QIPAHIESKLLPFQRDGVRF--ALQH---GGRILLA 195
R I +L+ K+ ++P +++ L +Q+ G + L+H GG +L
Sbjct: 587 RYIKGKKKLNELKSKFKNINKLSFEVPKDLKANLREYQKFGYNWLKTLEHLGLGG--ILG 644
Query: 196 DEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG 255
DEMGLGKT+QAI + L++ P+SL +W +++ P+ +V VL++ G
Sbjct: 645 DEMGLGKTLQAITFILSNKGK-KTLVVAPTSLIYNWK---EEFNKFAPNLVVEVLNE-GK 699
Query: 256 SNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHF 308
R + L +I S DV++ N+L NF DE+
Sbjct: 700 DKRE---------------EALRDIESKDVIITTYNLLKRDLEEYKKINFDYCFIDEAQA 744
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
+KN ++ + A + ++Y L+GTP + +EL+ + + P + + RY
Sbjct: 745 IKNPDSQNSEAVKEV--NSEYKFALTGTPMENSLMELWSIFDFVMPGYLYDRKRFTVRYY 802
Query: 369 KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA 428
K + + E+H+L+K ++ RR KKDV+ +LP K + +++ E D +++Y+
Sbjct: 803 KK----LNESEEVLSEIHSLIKPFIL-RRKKKDVIKELPDKIEKMHLVNLGE-DQKKVYS 856
Query: 429 LFRE------------LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVL 476
++ E K KI+ +++ L IN +SA KI A++
Sbjct: 857 IYANNALSIMEKKQDAEEFNKSKIEILSYITKLRQLALDPSVTINDYMGESA--KIEALV 914
Query: 477 DYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD 536
+ L IE G K L+F+ +L I ++K+ +DG R +V EF E +
Sbjct: 915 EILNQGIEEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGE 974
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN 596
+ ++S+KAGG GL LT+A VI + W P QA DRAHR+GQ + V V L+A
Sbjct: 975 N-SVFLISLKAGGTGLNLTSADIVIHFDPWWNPAVENQATDRAHRMGQKNVVEVIKLIAK 1033
Query: 597 DTVDDIVWDVVRSKLENLGQVLDGHE 622
T+++ V + K E + ++++ E
Sbjct: 1034 GTIEEKVVALQEEKKELISKIIEEGE 1059
>gi|336418202|ref|ZP_08598480.1| helicase, Snf2 family [Fusobacterium sp. 11_3_2]
gi|336160073|gb|EGN63137.1| helicase, Snf2 family [Fusobacterium sp. 11_3_2]
Length = 703
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 136/468 (29%), Positives = 227/468 (48%), Gaps = 38/468 (8%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQH-----GGRILLADEMGLGKTIQAIAVATCF 213
+K ++IP + L +Q GV + L+ GG +LAD+MGLGKT+Q I
Sbjct: 232 FEQKIEEIPTKYKKILREYQIVGVEWMLKLRSMNLGG--ILADDMGLGKTLQVITYLESV 289
Query: 214 RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
+ P LI+TP+SL L+W ++ + V +LS G +R + SN K +
Sbjct: 290 KRERPCLIITPASLILNWENEFNKF-----NSSVSILSIYG--DRKNREELLSNLKNEVI 342
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
I SYD + + ++ + F +I DE+ ++KN + K A I +++ L L
Sbjct: 343 ------ITSYDYLKRDIDLYENIEFDTIILDEAQYIKNHKTKAAQAVKKI--NSEFKLAL 394
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNH-EELHNLMKAT 392
+GTP + E++ + L N + Y + V Q N E L N+++
Sbjct: 395 TGTPLENSLAEIWSIFDFLMNGYLFNYDYFYKNYERAIVL---QAEKNVIERLKNMVEPF 451
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDV--AEKDMRQIY------ALFRELEVVKGKIKACK 444
++ RRLKKDVL +LP K + F+++ EK++ Q L + ++V KI+
Sbjct: 452 IL-RRLKKDVLKELPEKIEETYFVEMNQEEKNLYQANLVKINETLAQSIDVNTNKIEVLA 510
Query: 445 SEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
+++ + + L I S+ +KI A ++ ++ IE + L+F+ +LD + Q
Sbjct: 511 MLTKLRQICIDPRLLYEDI--SSSSSKINACIELIKKSIENKQRILLFSSFTTVLDLVAQ 568
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
+ + G T R LV +FQ + V ++S+KAGG GL LT AS VI +
Sbjct: 569 ECDNLSIPYFMLTGETNKVKRNQLVEDFQ-NEAVPLFLISLKAGGTGLNLTKASVVIHLD 627
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
W QA DRAHRIGQ +V V+ L+ +T+++ + ++ K E
Sbjct: 628 PWWNISAQNQATDRAHRIGQEDTVQVFNLITKNTIEEKILNLQNKKKE 675
>gi|170050421|ref|XP_001861304.1| helicase [Culex quinquefasciatus]
gi|167872038|gb|EDS35421.1| helicase [Culex quinquefasciatus]
Length = 1024
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 136/512 (26%), Positives = 250/512 (48%), Gaps = 57/512 (11%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+A +A +++ P +I+ ++ +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 107 LAETNAKAKTVFRFEASPPYIKFGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQ 166
Query: 206 AIAVATCFRDV----WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG-SNRSG 260
I++ ++ P +++ P S +W +W PS V L +G R+
Sbjct: 167 TISLLGYLKNFRNNPGPHIVIVPKSTLQNWVNEFGRWC---PSLRAVCL--IGDQETRNA 221
Query: 261 FTIVSSNTKRNIPLDGLFN--IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
F R++ + G ++ I SY++ ++ + + N++ ++ DE+H +KN ++K +
Sbjct: 222 FI-------RDVLMPGEWDVCITSYEMCIREKAVFKKFNWRYMVIDEAHRIKNEKSK-LS 273
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
L K A LLL+GTP + EL+ L L PD++ + ++ + + G
Sbjct: 274 EILREFKTAN-RLLLTGTPLQNNLHELWALLNFLLPDIFNSAEDFDSWFDANECIG---D 329
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVV 436
+ + LH ++K ++RRLK +V +L K+ ++F+ ++ K R+ Y L +++++V
Sbjct: 330 NTLIQRLHEVLKP-FLLRRLKSEVEKRLLPKKEVKIFVGLS-KMQREWYTKILMKDIDIV 387
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LE 480
G K K +Q++ + N Y D AE P D+ L
Sbjct: 388 NGAGKMEKMR--LQNILMQLRKCTNHPYLFDGAEPGPPYTTDWHLVENSGKMIILEKLLN 445
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
+ E G + LIF+ MLD + + + R+DG TP R ++ E+ + K
Sbjct: 446 KLQEQGSRVLIFSQMTRMLDILEDYCHWRGYNYCRLDGQTPHEDRTKMIDEYNAEGSQKF 505
Query: 541 A-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ V V+ L+ +T+
Sbjct: 506 IFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTI 565
Query: 600 DDIVWDV--VRSKLENL----GQVLDGHENSL 625
++ + + ++ KL+ L G+++D N L
Sbjct: 566 EEKIVERAEIKLKLDKLVIQQGRLVDNKVNQL 597
>gi|307211542|gb|EFN87620.1| Chromatin-remodeling complex ATPase chain Iswi [Harpegnathos
saltator]
Length = 1008
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 250/512 (48%), Gaps = 57/512 (11%)
Query: 149 AIASASAAPDLREKYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTI 204
A ++AS AP R ++ P +I+S +L +Q G+ + + ++G +LADEMGLGKT+
Sbjct: 106 AESNASVAPTTR--FESSPHYIKSGELRDYQIRGLNWMISLYENGINGILADEMGLGKTL 163
Query: 205 QAIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSG 260
Q I++ FR + P +++ P S +W ++W P V ++ R+
Sbjct: 164 QTISLLGYMKHFRSIPGPHIVIVPKSTLANWMNEFKKW--CPTLRAVCLIGD--AETRNT 219
Query: 261 FTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
F R++ + G +++ SY++V+K +++ N++ ++ DE+H +KN ++K +
Sbjct: 220 FI-------RDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSK-LS 271
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
L K A LLL+GTP + EL+ L L PDV+ + ++ + + G
Sbjct: 272 EILREFKTAN-RLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDSWFNTNSFLG---D 327
Query: 379 ASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVV 436
S E LH +++ ++RRLK +V L K+ +V++ ++ K R+ Y L +++++V
Sbjct: 328 NSLVERLHAVLRP-FLLRRLKSEVEKGLKPKKEIKVYIGLS-KMQREWYTKVLMKDIDIV 385
Query: 437 KGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLE 480
G K K +Q++ + N Y D AE P D L
Sbjct: 386 NGAGKIEKMR--LQNILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLP 443
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
+ + + L+F+ MLD + + R+DG T RQ + E+ K
Sbjct: 444 KLQQQESRVLVFSQMTRMLDILEDYCHWRCFQYCRLDGNTAHEDRQRQINEYNAPGSEKF 503
Query: 541 A-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ V V+ + +TV
Sbjct: 504 IFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTV 563
Query: 600 DDIVWDV--VRSKLENL----GQVLDGHENSL 625
++ + + V+ +L+ L G+++D + +L
Sbjct: 564 EEKIVERAEVKLRLDKLVIQQGRLVDAKQTAL 595
>gi|256052547|ref|XP_002569826.1| chromodomain helicase DNA binding protein [Schistosoma mansoni]
gi|353229870|emb|CCD76041.1| putative chromodomain helicase DNA binding protein [Schistosoma
mansoni]
Length = 1966
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 142/519 (27%), Positives = 230/519 (44%), Gaps = 62/519 (11%)
Query: 140 ENLHPLVQRAIASASAAPDLREKYDQIPAHIE---SKLLPFQRDGV---RFALQHGGRIL 193
ENL P + R + DL+++Y P+ ++ +L +Q +GV RF+ + +
Sbjct: 757 ENLSPELLRKLPPDKCLTDLKKQYTSQPSFLDETDGQLHEYQLEGVNWLRFSFGNKIDTI 816
Query: 194 LADEMGLGKTIQAIA-VATCFRD---VWPVLILTPSSLRLHWAAMIQQW---------LN 240
LADEMGLGKTIQ IA + + +++ P L+ P S ++W + W +
Sbjct: 817 LADEMGLGKTIQTIAFLYSLYKEGHCRGPFLVAAPLSTIINWEREFEFWAPDLYVVSYIG 876
Query: 241 IPPSEIVVVLSQLG---GSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSN 297
S V+ + G+ R G + T ++ L + SY+++ Q +L S +
Sbjct: 877 DKDSRTVIREHEFSFDEGAVRGGAKAMKMRTGTSVRFHVL--LTSYELISIDQALLGSID 934
Query: 298 FKIVIADESHFLKNAQAK--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPD 355
+++++ DE+H LKN Q+K R T I Y LLL+GTP + ELF L + P+
Sbjct: 935 WEVLVVDEAHRLKNNQSKFFRILTTYKI----GYKLLLTGTPLQNNLEELFHLLHFMTPE 990
Query: 356 VYKNVHEYGNRYCKGGVFGIYQGASNHEELHNL--MKATVMIRRLKKDVLAQLPVKRRQQ 413
+ ++ G + S E++ L M ++RRLK DVL +P K
Sbjct: 991 KFNDMQ---------GFLDEFADISKEEQVKKLHDMLGQHLLRRLKADVLQDMPSKGEFI 1041
Query: 414 VFLDVAEKDMRQI-YALFRELEVVKGKI---------------KACKSEEEVQSLKFTEK 457
V ++++ R + L R E + + K C S +
Sbjct: 1042 VRVELSPMQKRYYKFILTRNFEALSCRSGGSQVSLINIMMDLKKCCNHPFLFPSAAEEAQ 1101
Query: 458 NLINKIYTD----SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHC 513
+ N Y K+ + L + E + LIF+ MLD + +
Sbjct: 1102 RMPNGAYEGVGLRKGSGKLELMSKMLRKLYETKHRVLIFSQMTKMLDLLEDFLDSEGYKF 1161
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
RIDG RQ + F D + A +LS +AGG+G+ L +A TVI + W P +
Sbjct: 1162 ERIDGAVTGQLRQDAIDRFNAPDSLSFAFLLSTRAGGLGINLASADTVIIYDSDWNPHND 1221
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
IQA RAHRIGQ + V +Y + TV++ V V + K+
Sbjct: 1222 IQAFSRAHRIGQSNKVMIYRFVTRGTVEERVTQVAKKKM 1260
>gi|254975778|ref|ZP_05272250.1| putative helicase [Clostridium difficile QCD-66c26]
gi|255093165|ref|ZP_05322643.1| putative helicase [Clostridium difficile CIP 107932]
gi|255314907|ref|ZP_05356490.1| putative helicase [Clostridium difficile QCD-76w55]
gi|255517581|ref|ZP_05385257.1| putative helicase [Clostridium difficile QCD-97b34]
gi|255650692|ref|ZP_05397594.1| putative helicase [Clostridium difficile QCD-37x79]
gi|260683779|ref|YP_003215064.1| helicase [Clostridium difficile CD196]
gi|260687439|ref|YP_003218573.1| helicase [Clostridium difficile R20291]
gi|384361410|ref|YP_006199262.1| helicase [Clostridium difficile BI1]
gi|260209942|emb|CBA63920.1| putative helicase [Clostridium difficile CD196]
gi|260213456|emb|CBE05136.1| putative helicase [Clostridium difficile R20291]
Length = 1059
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 144/501 (28%), Positives = 235/501 (46%), Gaps = 61/501 (12%)
Query: 165 QIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPV 219
+IPA++ + L +Q +G+ + + GG +LADEMGLGKTIQ IA +
Sbjct: 599 EIPANLNANLRDYQINGLNWFKVLDYYKFGG--ILADEMGLGKTIQTIAFLLSLSNK-KS 655
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
LI+TP+SL +W +++ +I V+L +R + N
Sbjct: 656 LIVTPTSLIYNWKNEFEKF----APDIKVLLIHGNKRDREKCFMELEN------------ 699
Query: 280 IISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
+DV+L L + F I DE+ +KN A T + I + ++AL
Sbjct: 700 ---FDVILTTYGTLRNDLEKYSEIKFDYCILDEAQNIKNPVALVTESVKSINAENKFAL- 755
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIY-QGASNHEELHNLMKA 391
+GTP + +EL+ + + P G Y K ++ N + L L+K
Sbjct: 756 -TGTPMENNLLELWSIFDFIMP---------GYLYSKAKFQELFINKEDNVKNLKKLIKP 805
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQS 451
++ RR KK V+ +LP K + F+++ K+ ++IY+++ + K K K K ++ V
Sbjct: 806 FIL-RRSKKQVMKELPDKIEKNFFVEL-NKEQKKIYSVYSKDIQDKMKDKNLKKDKIVIF 863
Query: 452 LKFT-------EKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
T + +++ K Y + +KI L+ L I K L+F+ +L I +
Sbjct: 864 SYLTKLRQLCLDPSIVVKDYNKKS-SKIETCLEILRDSINENHKILLFSQFTSVLKNISK 922
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
K K+ IDG T R LV EF D K ++S+KAGG GL LT+A VI +
Sbjct: 923 ELDKYKIKYHYIDGKTNAKERLELVDEFNNSMDKKVFLISLKAGGTGLNLTSADMVIHFD 982
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 624
W P QA DRAHR GQ +SV V L+A T+++ + + SK E + Q ++G
Sbjct: 983 PWWNPSVENQASDRAHRFGQKNSVQVIKLIAKGTIEEKIIKLQESKKELINQFING---- 1038
Query: 625 LEVSSSQIRSSPAKQKTLDSF 645
E+S+ + S + ++ +D F
Sbjct: 1039 -ELSNEGVLKSLSDEEIIDLF 1058
>gi|306829829|ref|ZP_07463016.1| Snf2 family protein [Streptococcus mitis ATCC 6249]
gi|304427840|gb|EFM30933.1| Snf2 family protein [Streptococcus mitis ATCC 6249]
Length = 1031
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 224/479 (46%), Gaps = 48/479 (10%)
Query: 169 HIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATC-FRDVWPVLILTP 224
+++ L +Q GVR+ L H G +LAD+MGLGKT+Q IA T + VLIL P
Sbjct: 577 QVQASLRDYQEKGVRWLQMLHHYGFGGILADDMGLGKTLQTIAFLTSQVTEDSRVLILAP 636
Query: 225 SSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
S L +WA +++ P ++ VV +NR I+S N + + SY
Sbjct: 637 SGLIYNWADEFRRF--APQLDLAVVHGL--KANRE--EILSQNHQ--------IYVTSYA 682
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
+ ++ +F + DE+ +KNA K + + A +AL SGTP + E
Sbjct: 683 SFRQDSDLYQEMSFDFLFLDEAQIMKNAHTKIAQSLRQFVVPAVFAL--SGTPIENHLGE 740
Query: 345 LFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLA 404
L+ + + P + N E+ E++ +K VM RR K++VL
Sbjct: 741 LWSIFQIVLPGLLPNKKEFMKLPA--------------EQVAQFIKPFVM-RRKKEEVLT 785
Query: 405 QLP----------VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKF 454
+LP ++ +Q+ + MR+ A + E + +++ ++ +
Sbjct: 786 ELPDLIEVVYKNELEDQQKAIYLAQLQQMRERLAQVTDQEFQRSRVEILSGLMRLRQICD 845
Query: 455 TEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
T ++ A K+ ++ D L V + G + LIF+ + ML+ I Q +
Sbjct: 846 TPALFMDDY--QGASGKLDSLRDLLLQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSF 903
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
+I G TP RQ + F + + A ++S+KAGGVGL LT A TVI +L W P Q
Sbjct: 904 KITGSTPAQDRQEMTKAFNQGER-DAFLISLKAGGVGLNLTGADTVILVDLWWNPAVEAQ 962
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIR 633
A RAHR+GQ V VY L+ T+++ + ++ K + QVLDG E+ +S ++IR
Sbjct: 963 AIGRAHRMGQEQKVEVYRLITKGTIEEKIQELQEQKKHLVSQVLDGTESRSSLSLAEIR 1021
>gi|168213595|ref|ZP_02639220.1| helicase, SNF2/RAD54 family [Clostridium perfringens CPE str. F4969]
gi|170714879|gb|EDT27061.1| helicase, SNF2/RAD54 family [Clostridium perfringens CPE str. F4969]
Length = 1084
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 235/493 (47%), Gaps = 57/493 (11%)
Query: 154 SAAPDLREKYDQIPAHIESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIA 208
S ++ + + ++P +++ L +Q+ G + L+H GG +L DEMGLGKT+QAI
Sbjct: 600 SKFKNINKLFFEVPKDLKANLREYQKFGYNWLKTLEHLGLGG--ILGDEMGLGKTLQAIT 657
Query: 209 VATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNT 268
+ L++ P+SL +W +++ P+ +V VL++ G R
Sbjct: 658 FILSNKGK-KTLVVAPTSLIYNWK---EEFNKFAPNLVVEVLNE-GKDKRE--------- 703
Query: 269 KRNIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATL 321
+ L +I S DV++ N+L NF DE+ +KN ++ + A
Sbjct: 704 ------EALRDIESKDVIITTYNLLKRDLEEYKKINFDYCFIDEAQAIKNPDSQNSEAVK 757
Query: 322 PIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASN 381
+ ++Y L+GTP + +EL+ + + P + + RY K + +
Sbjct: 758 EV--NSEYKFALTGTPMENSLMELWSIFDFVMPGYLYDRKRFTVRYYKK----LNESEEV 811
Query: 382 HEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE--------- 432
E+H+L+K ++ RR KKDV+ +LP K + +D+ E D +++Y+++
Sbjct: 812 LSEIHSLIKPFIL-RRKKKDVIKELPDKIEKMHLVDLGE-DQKKVYSIYANNALSIMEKK 869
Query: 433 ---LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKF 489
E K KI+ +++ L IN +SA K A+++ L IE G K
Sbjct: 870 QDAEEFNKSKIEILSYITKLRQLALDPSVTINDYMGESA--KTEALVEILNQGIEEGHKI 927
Query: 490 LIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGG 549
L+F+ +L I ++K+ +DG R +V EF E ++ ++S+KAGG
Sbjct: 928 LVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGEN-SVFLISLKAGG 986
Query: 550 VGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRS 609
GL LT+A VI + W P QA DRAHR+GQ + V V L+A T+++ V +
Sbjct: 987 TGLNLTSADIVIHFDPWWNPAVENQATDRAHRMGQKNVVEVIKLIAKGTIEEKVVALQEE 1046
Query: 610 KLENLGQVLDGHE 622
K E + ++++ E
Sbjct: 1047 KKELISKIIEEGE 1059
>gi|303257421|ref|ZP_07343434.1| SNF2/helicase domain protein [Burkholderiales bacterium 1_1_47]
gi|302859778|gb|EFL82856.1| SNF2/helicase domain protein [Burkholderiales bacterium 1_1_47]
Length = 1361
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 240/485 (49%), Gaps = 50/485 (10%)
Query: 166 IPAHIESKLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
IP+ +E++L +QR+G + ++ G +LAD+MGLGKT+QAIAV + + P L++
Sbjct: 902 IPSGLEAQLRQYQREGFEWLMRLCTWGAGGILADDMGLGKTVQAIAVLLGRKILGPSLLV 961
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+++ +W SE+V L F +S + I L N+
Sbjct: 962 VPTAVLYNWK-----------SEMVRFAPGLR------FADFNSGNREEI----LKNLKD 1000
Query: 283 YDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
YDV+L +L + + + + DE+H +KN + + + + I AQ +LLSG
Sbjct: 1001 YDVILCTYGVLNTEIEALSRVEWNLAVLDEAHAIKNKATQTSHSVMKI--NAQGRILLSG 1058
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV-- 393
TP + E++ E P + ++G+R+ + I + ++ +L+K +
Sbjct: 1059 TPIQNDLSEIWNLFEFANPGYLGSYQQFGDRF----ILPIEKKKDKGKQ--HLLKQLIGP 1112
Query: 394 -MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL 452
++RR K +VL +LP K V ++++E+++ IY R + + + E + +L
Sbjct: 1113 FILRRTKAEVLDELPEKTELIVPVELSEEEL-AIYENIRTRTLSGLQSEKINPIEALMAL 1171
Query: 453 KFTEK-----NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFL 507
+ L++K T + +KI L+ + + E + L+F+ L + Q
Sbjct: 1172 TKLRQAACSPELVDKHLTIPS-SKIRVFLELVRELKENKHRALVFSQFTSFLALVRQALD 1230
Query: 508 KKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSW 567
K + + +DG P A R+ LV FQ D+ ++S+KAGG GL LTAA VI + W
Sbjct: 1231 KAGIEYLYLDGSVPAAQRKKLVETFQ-NGDMPLFLISLKAGGTGLNLTAADYVIHLDPWW 1289
Query: 568 TPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
P QA DRA+RIGQ V +Y L++ TV+ + ++ ++K +L+G + + ++
Sbjct: 1290 NPAVEDQASDRAYRIGQKRPVTIYKLISEKTVEQKILELHKTKKNLADALLEGSDVAKKL 1349
Query: 628 SSSQI 632
S+ +I
Sbjct: 1350 SNEEI 1354
>gi|423083915|ref|ZP_17072443.1| protein, SNF2 family [Clostridium difficile 002-P50-2011]
gi|423087386|ref|ZP_17075774.1| protein, SNF2 family [Clostridium difficile 050-P50-2011]
gi|357543713|gb|EHJ25728.1| protein, SNF2 family [Clostridium difficile 002-P50-2011]
gi|357544804|gb|EHJ26791.1| protein, SNF2 family [Clostridium difficile 050-P50-2011]
Length = 1059
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 144/501 (28%), Positives = 234/501 (46%), Gaps = 61/501 (12%)
Query: 165 QIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPV 219
+IP ++ + L +Q +G+ + + GG +LADEMGLGKTIQ IA +
Sbjct: 599 EIPTNLNANLRDYQINGLNWFKVLDYYKFGG--ILADEMGLGKTIQTIAFLLSLSNK-KS 655
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
LI+TP+SL +W +++ +I V+L +R I N
Sbjct: 656 LIVTPTSLIYNWKNEFEKF----APDIKVLLIHGNKRDREKCFIELEN------------ 699
Query: 280 IISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
+DV+L L + F I DE+ +KN A T + I + ++AL
Sbjct: 700 ---FDVILTTYGTLRNDLEKYSEIKFDYCIIDEAQNIKNPVALVTESVKSINAENKFAL- 755
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIY-QGASNHEELHNLMKA 391
+GTP + +EL+ + + P G Y K ++ N + L L+K
Sbjct: 756 -TGTPMENNLLELWSIFDFIMP---------GYLYSKAKFQELFINKEDNVKNLKKLIKP 805
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQS 451
++ RR KK V+ +LP K + F+++ K+ ++IY+++ + K K K K ++ V
Sbjct: 806 FIL-RRSKKQVMKELPDKIEKNFFVEL-NKEQKKIYSVYSKDIQDKMKDKNLKKDKIVIF 863
Query: 452 LKFT-------EKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
T + +++ K Y + +KI L+ L I K L+F+ +L I +
Sbjct: 864 SYLTKLRQLCLDPSIVVKDYNKKS-SKIETCLEILRDSINENHKILLFSQFTSVLKNISK 922
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
K K+ IDG T R LV EF D K ++S+KAGG GL LT+A VI +
Sbjct: 923 ELDKYKIKYHYIDGKTNAKERLELVDEFNNSMDKKVFLISLKAGGTGLNLTSADMVIHFD 982
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 624
W P QA DRAHR GQ +SV V L+A T+++ + + SK E + Q ++G
Sbjct: 983 PWWNPSVENQASDRAHRFGQKNSVQVIKLIAKGTIEEKIIKLQESKKELINQFING---- 1038
Query: 625 LEVSSSQIRSSPAKQKTLDSF 645
E+S+ + S + ++ +D F
Sbjct: 1039 -ELSNEGVLKSLSDEEIIDLF 1058
>gi|227893708|ref|ZP_04011513.1| Snf2 family helicase [Lactobacillus ultunensis DSM 16047]
gi|227864568|gb|EEJ71989.1| Snf2 family helicase [Lactobacillus ultunensis DSM 16047]
Length = 1180
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 234/484 (48%), Gaps = 47/484 (9%)
Query: 162 KYDQIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDV 216
K +++P +++ L P+Q++G + GG LLADEMGLGKT+Q IA+ ++
Sbjct: 706 KKNKLPVSLQTVLRPYQKEGFNWLSTIVNYNFGG--LLADEMGLGKTLQIIALLLSRKEQ 763
Query: 217 ----WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNI 272
P L++ P+S+ +W A +Q++ P V +L G N+ ++ S
Sbjct: 764 ISSNLPSLVVAPASVIYNWQAELQKF---APHLSVCILD--GNKNKREKMLMES------ 812
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
P L+ I SY + + F + I DE+ +KN +A TA ++ +IK A + L
Sbjct: 813 PKYDLY-ISSYQSLNHDLESYDNLTFDLQIIDEAQNIKNHEAI-TAKSVKVIK-AHHKLA 869
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
L+GTP ++ EL+ + L P + ++ + F I E+ L+
Sbjct: 870 LTGTPIENKLSELWSIFDYLMPGFLGSYLDFKKK------FEIPIVKKKDEDAEALLSNM 923
Query: 393 VM---IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE--LEVVKGK----IKAC 443
+M +RRLKK+VL LP K +QV L K +Y L + + + G+ K
Sbjct: 924 IMPFTLRRLKKNVLLDLPAKD-EQVILVKMNKKQEGLYQLQTQKLIAQLNGQEETDFKKS 982
Query: 444 KSEEEVQSLKFTE----KNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
+ E Q +K E L+ + Y + K+ +D ++T +E G K L+F+ ML
Sbjct: 983 RFEIFAQIIKLREICCDPRLLYENYHGKSN-KLITTVDLIKTNLENGHKILLFSQFTSML 1041
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
+ + K K+ + G TP RQ + EF + ++S+KAGG G+ LT+A
Sbjct: 1042 EILQSKLKKAKIPLFMLTGSTPKEKRQEYIREFNTMEQPGVFLISLKAGGTGINLTSADV 1101
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
VI + W QA DRAHRIGQ SV VY ++ +T+++ + + + K E L Q +
Sbjct: 1102 VIHYDPWWNLAAENQATDRAHRIGQKHSVKVYKMVTKNTIEERIIKLQQKKAE-LAQAIL 1160
Query: 620 GHEN 623
G+ N
Sbjct: 1161 GNSN 1164
>gi|405983397|ref|ZP_11041703.1| hypothetical protein HMPREF9451_00793 [Slackia piriformis YIT 12062]
gi|404389003|gb|EJZ84084.1| hypothetical protein HMPREF9451_00793 [Slackia piriformis YIT 12062]
Length = 1092
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/476 (28%), Positives = 227/476 (47%), Gaps = 43/476 (9%)
Query: 165 QIPAHIESKLLPFQRDGVRF--ALQHGGRI-LLADEMGLGKTIQAIAVATC----FRDVW 217
++P + + L P+QR+G + AL G +LADEMGLGK+IQ I+ +
Sbjct: 617 RVPESLHATLRPYQREGFAWMNALADMGFAGILADEMGLGKSIQFISFVLSRIDEIKSTA 676
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
PVLI+ P+SL +WA ++ PS V + + G+ R + +R +D +
Sbjct: 677 PVLIVCPASLVFNWA---DEFARFAPS---VSVEPIVGTKRE-----RAAARRKKGIDVI 725
Query: 278 FNIISYDVV-LKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
I SYD++ + +++ L ++ F V+ DE+ ++KN A + K ++AL +GT
Sbjct: 726 --ITSYDLMRIDIEDYLDTTFFCHVL-DEAQYIKNHGTLTARAVKRVHAKHRFAL--TGT 780
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIR 396
P +R E++ + L P + + R+ I G N E + T M+R
Sbjct: 781 PMENRLSEIWSIFDFLMPGFLGSYMRFRERF----ELDIIGGDENAAERLQKIVGTFMLR 836
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA----LFRELEVVKGKIKACKSEEEVQSL 452
R+K +VL +LP K V + + +K R A L L + + K + ++
Sbjct: 837 RVKSEVLPELPDKLESAVLIQMTDKQRRLYDAHEQHLRESLTAQRSRRKHGDESKPAATV 896
Query: 453 K-FTEKNLINKIYTD---------SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAI 502
+ E + +I D AKI A+ D +E+ K L+F+ L+ I
Sbjct: 897 EVLAELTRLRQICCDPRLLLEDYKEPGAKIAAIADLIESARNENQKTLVFSQFTSFLELI 956
Query: 503 HQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIF 562
+ V I G TP R A+V++F + DD ++S+KAGG GL LT AS VI
Sbjct: 957 AEKLDSLDVPYFTITGATPKKQRIAMVSQFNQ-DDTPVFLVSLKAGGTGLNLTGASVVIH 1015
Query: 563 AELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
A+ W QA DRAHRIGQ V+V+ ++A T+++ + + +K E +V+
Sbjct: 1016 ADPWWNAATQNQATDRAHRIGQKRVVSVHKVIARGTIEERILKLQEAKNELADKVV 1071
>gi|425471486|ref|ZP_18850346.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC 9701]
gi|389882614|emb|CCI36936.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC 9701]
Length = 1390
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 250/532 (46%), Gaps = 43/532 (8%)
Query: 113 RLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIES 172
R F P LS + + ++ +NL QR S P ++P+ +++
Sbjct: 883 RFHPFAAPILSELTEEVGQLKADKRWRDNL----QRFQESQDFTP-------EVPSTLQA 931
Query: 173 KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+L +Q +G R+ Q G LAD+MGLGKT+QA+AV P L + P+S+ L
Sbjct: 932 ELRDYQLEGFRWLARLAQWGAGACLADDMGLGKTLQALAVILTRASEGPTLAIAPTSVCL 991
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK- 288
+W + +++ P I+ QLG +R R P D L + SY ++ +
Sbjct: 992 NWISEAERF--APTLNII----QLGTGDRQALL------DRLQPFDLL--VCSYGLLQQE 1037
Query: 289 -LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFK 347
+ +L ++ ++ DE+ +KN KR+ A + + + + L+ +GTP + EL+
Sbjct: 1038 EVATMLAGVEWRTIVLDEAQAIKNFSTKRSKAAMNL--RGDFKLITTGTPIENHLGELWN 1095
Query: 348 QLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLP 407
+ P + ++ + R+ Y + E+L L++ ++RR K VLA+LP
Sbjct: 1096 LFRFINPGLLGSLESFDRRFATP--IEKYGDKTAREQLKKLVRP-FLLRRTKNQVLAELP 1152
Query: 408 VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL----KFTEKNLINKI 463
+ V ++++ ++ AL R + + + +Q L K ++
Sbjct: 1153 PRTEILVPIELSVEEKAFYEALRRRALEKLSESDSTAGAKHLQVLAEIMKLRRACCHPQL 1212
Query: 464 YT---DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
D A +K+ + L+ +++ K L+F+ L I ++++ +DG T
Sbjct: 1213 VAPDLDLAGSKLSRFGEILDELLDNQHKALVFSQFVDHLAIIRSYLDQRQIKYQYLDGST 1272
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P + RQ V FQ + ++S+KAGG GL LTAA VI + W P QA DRAH
Sbjct: 1273 PASDRQKQVKAFQAGEG-DVFLISLKAGGTGLNLTAADYVIHLDPWWNPAVEDQASDRAH 1331
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
RIGQ V +Y L+A DT+++ + D+ K + +L+G + S ++S+ ++
Sbjct: 1332 RIGQKRPVTIYRLVAKDTIEEKIVDLHHHKRDLADSLLEGTDASGKLSTDEL 1383
>gi|399522747|ref|ZP_10763410.1| Probable global transcription activator SNF2L1 [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399109611|emb|CCH39971.1| Probable global transcription activator SNF2L1 [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 1355
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 229/485 (47%), Gaps = 54/485 (11%)
Query: 159 LREKYDQIPAHIESKLLPFQRDG----VRFALQHGGRILLADEMGLGKTIQAIAVATCFR 214
LR+ +P+ ++++L +Q++G R A Q G LAD+MGLGKT+Q +A+
Sbjct: 891 LRDYQPAVPSTLQAELRDYQQEGFAWLARLA-QWGVGACLADDMGLGKTVQTLALLLLRA 949
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P+S+ L+W A SNR T+ + +R L
Sbjct: 950 AQGPQLVVAPTSVTLNWQAE---------------------SNRFAPTLNIRDYQRTRTL 988
Query: 275 DGL----FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
+GL I+SY ++ + + + V+ DE+ +KNAQ KR+ A + + +A +
Sbjct: 989 EGLGPRDLVIVSYGLLQQDADAFSKQPWISVVLDEAQAIKNAQTKRSQAAMAL--QADFR 1046
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG-ASNHEELHNLM 389
L+ +GTP + EL+ + P + + + R+ I QG AS L NL+
Sbjct: 1047 LIATGTPLENHLGELWNLFRFINPSLLGSQDSFSQRFATP----IEQGDASARRALKNLI 1102
Query: 390 KATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEV 449
+ ++ RRLK VL +LP + + ++E + Q AL ++ +EE
Sbjct: 1103 QPFIL-RRLKSQVLDELPARTEITYKVPLSEAEAHQYEALRQQ-----AVDNLSAPDEER 1156
Query: 450 QSLK-FTEKNLINKIYTDSA---------EAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
L+ TE + + + +K+ A + +E ++E K L+F+ L
Sbjct: 1157 SPLQVLTEITRLRRFCCHPSLVIPGSPLSSSKLQAFAEIVEELLENRHKALVFSQFVDHL 1216
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
+ + K+ +H +DG TP RQ V FQ + + ++S+KAGG GL LTAA
Sbjct: 1217 NIVRAWLDKRGIHYQYLDGATPAKERQKRVNAFQAGEG-EIFLISLKAGGSGLNLTAADY 1275
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
VI + W P QA DRAHR+GQ V +Y L+ +T+++ + + K + +L+
Sbjct: 1276 VIHLDPWWNPAVEDQASDRAHRMGQKRPVTIYRLVTENTIEEQIVSLHARKRDLASSLLE 1335
Query: 620 GHENS 624
G E S
Sbjct: 1336 GGEMS 1340
>gi|18310607|ref|NP_562541.1| helicase, SNF2/RAD54 family [Clostridium perfringens str. 13]
gi|18145288|dbj|BAB81331.1| SWI/SNF family helicase [Clostridium perfringens str. 13]
Length = 1084
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 238/506 (47%), Gaps = 64/506 (12%)
Query: 148 RAIASASAAPDLREKYD-------QIPAHIESKLLPFQRDGVRF--ALQH---GGRILLA 195
R I +L+ K+ ++P +++ L +Q+ G + L+H GG +L
Sbjct: 587 RYIKGKKKLNELKSKFKNINKLSFEVPKDLKANLREYQKFGYNWLKTLEHLGLGG--ILG 644
Query: 196 DEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG 255
DEMGLGKT+QAI + L++ P+SL +W +++ P+ +V VL++ G
Sbjct: 645 DEMGLGKTLQAITFILSNKGK-KTLVVAPTSLIYNWK---EEFNKFAPNLVVEVLNE-GK 699
Query: 256 SNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHF 308
R + L +I S DV++ N+L NF DE+
Sbjct: 700 DKRE---------------EALRDIESKDVIITTYNLLKRDLEEYKKINFDYCFIDEAQA 744
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
+KN ++ + A + ++Y L+GTP + +EL+ + + P + + RY
Sbjct: 745 IKNPDSQNSEAVKEV--NSEYKFALTGTPMENSLMELWSIFDFVMPGYLYDRKRFTVRYY 802
Query: 369 KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA 428
K + + E+H+L+K ++ RR KKDV+ +LP K + +D+ E + +++Y+
Sbjct: 803 KK----LNESEEVLSEIHSLIKPFIL-RRKKKDVIKELPDKIEKMHLVDLGE-EQKKVYS 856
Query: 429 LFRE------------LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVL 476
++ E K KI+ +++ L IN +SA KI A++
Sbjct: 857 IYANNALSIMEKKQDAEEFNKSKIEILSYITKLRQLALDPSVTINDYMGESA--KIEALV 914
Query: 477 DYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD 536
+ L +E G K L+F+ +L I ++K+ +DG R +V EF E +
Sbjct: 915 EILNQGVEEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGE 974
Query: 537 DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAN 596
+ ++S+KAGG GL LT+A VI + W P QA DRAHR+GQ + V V L+A
Sbjct: 975 N-SVFLISLKAGGTGLNLTSADIVIHFDPWWNPAVENQATDRAHRMGQKNVVEVIKLIAK 1033
Query: 597 DTVDDIVWDVVRSKLENLGQVLDGHE 622
T+++ V + K E + ++++ E
Sbjct: 1034 GTIEEKVVALQEEKKELISKIIEEGE 1059
>gi|332980995|ref|YP_004462436.1| SNF2-like protein [Mahella australiensis 50-1 BON]
gi|332698673|gb|AEE95614.1| SNF2-related protein [Mahella australiensis 50-1 BON]
Length = 1040
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 143/528 (27%), Positives = 251/528 (47%), Gaps = 50/528 (9%)
Query: 111 KERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHI 170
+ +L+ FP ++++ + +N + N + I SA D+ +P
Sbjct: 525 RSKLFNFP-----ELDRLIEKNRAWNAKGNNKFLQFKDEIRSAKPIEDI-----PLPQPF 574
Query: 171 ESKLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSL 227
++ L +Q++G+ F ++G +LAD+MGLGKTIQA+ + + P L++ P +L
Sbjct: 575 DNILRQYQKEGINWMHFLRKYGFGGILADDMGLGKTIQALVLISASNSDRPSLVICPKTL 634
Query: 228 RLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVL 287
+W +Q++ P + ++V Q G+ R I N ++ L I SY V+
Sbjct: 635 VYNWYNEVQKF--TPQLKTLIVEGQ--GAER----IQLINDIKHYDLI----ITSYPVIQ 682
Query: 288 KLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFK 347
K L F+ I DE+ ++KN + K TA ++ I+ A+Y L L+GTP + +EL+
Sbjct: 683 KDIEYLADKTFEYCIIDEAQYIKNHKTK-TAKSIKAIR-AKYRLALTGTPIENNLMELWS 740
Query: 348 QLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT--VMIRRLKKDVLAQ 405
+ L P + E+ RY + ++ L++L+ ++RR KK++L +
Sbjct: 741 IFDFLMPGFLGSDSEFKARYDTPIM-----KNNDISALNSLLGRIRPFVLRRTKKEMLKE 795
Query: 406 LPVKRRQ-----------QVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKF 454
LP K Q ++ V E+ ++A+ + +I+ + ++ +
Sbjct: 796 LPPKMEQVSYAHLTPDQLALYTSVLEQVKSNVFAIVEQKGFEHSQIEILAALTRLRQICN 855
Query: 455 TEKNL-INKIYTDS--AEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKV 511
L IN T + K+ + L+ +E K L+F+ ML + KK V
Sbjct: 856 HPALLTINTPATTKKLSSGKLDQFDELLDEALEGDHKVLVFSQFVQMLGILSNHLDKKGV 915
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
+DG T +RQA++ F +++K ++S+KAGG GL LTAA TVI + W P
Sbjct: 916 PYCYLDGQT--RNRQAVIERFNNDENIKVFLISIKAGGFGLNLTAADTVIIFDPWWNPMV 973
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
+QA DRA+RIGQ VNVY L+ T+++ + + K V+D
Sbjct: 974 EMQATDRAYRIGQTHPVNVYRLITRGTIEEKILKLQEKKKALFDNVVD 1021
>gi|326428031|gb|EGD73601.1| SNF2 family DNA-dependent ATPase [Salpingoeca sp. ATCC 50818]
Length = 2192
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 233/494 (47%), Gaps = 55/494 (11%)
Query: 174 LLPFQRDGVRF---ALQHG-GRILLADEMGLGKTIQAIAVATCF------RDVWPVLILT 223
L P+Q + ++F +HG +LADEMGLGKT+Q I++ R V L+
Sbjct: 88 LRPYQLESLQFFANLYRHGVSGGILADEMGLGKTLQTISLLAYLHEHNLSRGVH--LVTC 145
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS- 282
P S+ W+ ++W PS V V G R+ + K P D + +++
Sbjct: 146 PLSVLGSWSNEFKRWC---PSLTVQVYH---GPERAA--VAKKLRKIAKPQDSVQVLLTT 197
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
Y++V K + + N+ V+ DE+H LKN ++ + + + K+ + LLL+GTP +
Sbjct: 198 YEMVSKDKRMFRIFNYDCVVVDEAHRLKNENSQLSLSLRAL--KSSFRLLLTGTPIQNNM 255
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE---ELHNLMKATVMIRRLK 399
EL+ L L+P ++ + +F + G ++ + +LH ++K +RRLK
Sbjct: 256 HELWSLLNFLFPQLFGESTTFDT------LFDVKTGHADKDVLAKLHYILKP-FTLRRLK 308
Query: 400 KDVLAQLPVKRRQQVFLDVA-----------EKDMRQIYALFRE------LEVVKGKIKA 442
+DV LP K +++ + EKD+ + A R L + KA
Sbjct: 309 QDVEKALPDKIETNLYVTLTDLQKKYYKAILEKDVHGLLAEMRGRSKTRLLNTIMQLRKA 368
Query: 443 CKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAI 502
C ++ N + + K+ + L+ + G + LIF+ MLD I
Sbjct: 369 CNHPYLFDGVE-PGPPFTNGPHLWQSSGKMIILHKLLQKLKAQGSRVLIFSQMNRMLDLI 427
Query: 503 HQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD-DVKAAVLSMKAGGVGLTLTAASTVI 561
H + +IDG RQ + FQE D DV A +LS +AGG+GL LT A VI
Sbjct: 428 HDYCFSQGYKVCQIDGSMNALDRQEAIERFQEDDSDVFAFLLSTRAGGLGLNLTKADAVI 487
Query: 562 FAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGH 621
+ W P IQA DRAHRIGQ +V VY L+ ++TVD+ + +KL +L G
Sbjct: 488 LYDSDWNPFADIQAIDRAHRIGQTKAVKVYRLITDNTVDEHIQQRAEAKLYLNALILQGE 547
Query: 622 E---NSLEVSSSQI 632
+ ++ +VS++++
Sbjct: 548 QVADSATKVSNAEL 561
>gi|390440640|ref|ZP_10228864.1| Genome sequencing data, contig C316 [Microcystis sp. T1-4]
gi|389836037|emb|CCI32990.1| Genome sequencing data, contig C316 [Microcystis sp. T1-4]
Length = 1390
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/532 (25%), Positives = 250/532 (46%), Gaps = 43/532 (8%)
Query: 113 RLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIES 172
R F P LS + + ++ +NL QR S P ++P+ +++
Sbjct: 883 RFHPFAAPILSELSEEVGQLKADKRWRDNL----QRFQESQDFTP-------EVPSTLQA 931
Query: 173 KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+L +Q +G R+ Q G LAD+MGLGKT+QA+AV P L + P+S+ L
Sbjct: 932 ELRDYQLEGFRWLARLAQWGAGACLADDMGLGKTLQALAVILTRASEGPTLAIAPTSVCL 991
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK- 288
+W + +++ P I+ QLG +R R P D L + SY ++ +
Sbjct: 992 NWISEAERF--APTLNII----QLGTGDRQALL------DRLQPFDLL--VCSYGLLQQE 1037
Query: 289 -LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFK 347
+ +L ++ ++ DE+ +KN KR+ A + + + + L+ +GTP + EL+
Sbjct: 1038 EVATMLAGVEWRTIVLDEAQAIKNFSTKRSKAAMNL--RGDFKLITTGTPIENHLGELWN 1095
Query: 348 QLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLP 407
+ P + ++ + R+ Y + E+L L++ ++RR K VLA+LP
Sbjct: 1096 LFRFINPGLLGSLESFDRRFATP--IEKYGDKTAREQLKKLVRP-FLLRRTKNQVLAELP 1152
Query: 408 VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL----KFTEKNLINKI 463
+ V ++++ ++ AL R + + + +Q L K ++
Sbjct: 1153 PRTEILVPIELSVEEKAFYEALRRRALEKLSESDSTAGAKHLQVLAEIMKLRRACCHPQL 1212
Query: 464 YT---DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
D A +K+ + L+ +++ K L+F+ L + ++++ +DG T
Sbjct: 1213 VAPDLDLAGSKLSRFGEILDDLLDNQHKALVFSQFVDHLAIVRSYLEQRQIKYQYLDGST 1272
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P + RQ V FQ + ++S+KAGG GL LTAA VI + W P QA DRAH
Sbjct: 1273 PASDRQKQVKAFQAGEG-DVFLISLKAGGTGLNLTAADYVIHLDPWWNPAVEDQASDRAH 1331
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
RIGQ V +Y L+A DT+++ + D+ K + +L+G + S ++S+ ++
Sbjct: 1332 RIGQKRPVTIYRLVAKDTIEEKIVDLHHHKRDLADSLLEGTDASGKLSTDEL 1383
>gi|345888965|ref|ZP_08840004.1| hypothetical protein HMPREF0178_02778 [Bilophila sp. 4_1_30]
gi|345040127|gb|EGW44412.1| hypothetical protein HMPREF0178_02778 [Bilophila sp. 4_1_30]
Length = 1343
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 221/482 (45%), Gaps = 44/482 (9%)
Query: 166 IPAHIESKLLPFQRDGV----RFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
+P+ + ++L +Q DG R A + G LAD+MGLGKT+Q IAV ++ P +I
Sbjct: 873 VPSTLRAELRDYQLDGYVWMSRLA-RWGAGACLADDMGLGKTVQTIAVLLAQSELGPSII 931
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
+ P+S+ +W + ++ + + + G +R+ P D L +
Sbjct: 932 IAPTSVCHNWENELDRFAP------TLSVHRFGPGDRTALVGALG------PGDVL--VA 977
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSR 341
SY ++ L +++ + DE+ LKNA +R A+ I A + + L+GTP +R
Sbjct: 978 SYGLLHTEAKCLSGREWQVAVFDEAQALKNADTRRARASRQI--PAAFRVALTGTPIENR 1035
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKGGV-----FGIYQGASNHEELHNLMKATVMIR 396
+L+ + P + + R+ + +G S + + ++R
Sbjct: 1036 LEDLWSLFNLINPGLLGTRQSFQKRFAAASAPSTEENAVSEGQSAARQALRALVRPFILR 1095
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTE 456
R K +VL +LP + Q + +D+ + D R Y R + ++A K E S KF+
Sbjct: 1096 RTKSEVLTELPPRTEQVIEVDLPD-DERAFYEALRRNALAS--LEAAKQEYAEGSQKFSI 1152
Query: 457 KNLINKIY------------TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
+ K+ T AK+ A ++ +E ++ G K L+F+ L +
Sbjct: 1153 LTELMKLRRACCAPALIDPGTSLTGAKLSAFMELVEELVRGGHKALVFSQFVGCLSEARR 1212
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
L +DG TP RQA V FQ K D+ ++S+KAGG GL LTAA VI
Sbjct: 1213 LLDAAGYGYQYLDGSTPDRERQAAVAAFQSGKGDL--FLISLKAGGQGLNLTAADYVIHL 1270
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
+ W P QA DRA+R+GQ V VY L+A TV++ + + RSK VL+G +
Sbjct: 1271 DPWWNPAVEDQASDRAYRLGQQRPVTVYRLVARGTVEESILKLHRSKRALAADVLEGTDV 1330
Query: 624 SL 625
L
Sbjct: 1331 PL 1332
>gi|160935631|ref|ZP_02083006.1| hypothetical protein CLOBOL_00521 [Clostridium bolteae ATCC BAA-613]
gi|158441375|gb|EDP19085.1| hypothetical protein CLOBOL_00521 [Clostridium bolteae ATCC BAA-613]
Length = 1075
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 224/463 (48%), Gaps = 38/463 (8%)
Query: 167 PAHIESKLLPFQRDG---VRFALQHGGRILLADEMGLGKTIQAIAV---ATCFRDVWPVL 220
P + L +QR G +R +G +LAD+MGLGKTIQ IA+ A + P L
Sbjct: 602 PERLRGVLREYQRIGYVWLRTLDSYGFGGILADDMGLGKTIQIIALLEDAYGSGEQSPSL 661
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
I+ P+SL +W I+++ P + VLS +G S+ ++ + RN P D +
Sbjct: 662 IICPASLVYNWEHEIRRF---APD--LKVLSVVGSSSER--EVLLNEVGRN-PQDYQVIV 713
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
SYD++ + + + +F+ + DE+ ++KNA + A + + ++AL +GTP +
Sbjct: 714 TSYDLLRRDVGLYEAIHFRYQVIDEAQYIKNASTQSARAVKSLDVQTRFAL--TGTPVEN 771
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKK 400
R EL+ + L P + Y + + +G + + ++RR+KK
Sbjct: 772 RLGELWSIFDYLMPGFLFGSQFFKREY---EIPIVREGDGAALKRLKRLIGPFVLRRVKK 828
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYAL----FRELEVVKGKIKACKSEEEVQSLKFTE 456
DVL +LP K + V+ + E + +++YA F+E G +A + + ++ E
Sbjct: 829 DVLKELPDKMEEVVYSNF-ETEQKKLYAANAAKFKEKLSTGGFGQAGEGKLQI----LAE 883
Query: 457 KNLINKIYTD---------SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFL 507
+ +I D + AK+ +D + + G K L+F+ MLD IH F
Sbjct: 884 LMRLRQICCDPRLCYDNYRGSSAKLETCMDLVRRGVAGGHKILLFSQFTSMLDIIHTRFE 943
Query: 508 KKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSW 567
K+ + + G T R LV +F KD+V ++S+KAGG GL LTAA VI + W
Sbjct: 944 KEGIMSHMLTGATSKEERIRLVGDFG-KDEVPVFLISLKAGGTGLNLTAADIVIHYDPWW 1002
Query: 568 TPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
QA DR HRIGQ V VY L+ +T+++ + + +K
Sbjct: 1003 NVAAQNQATDRTHRIGQDKQVTVYKLITRNTIEENILKLQEAK 1045
>gi|410643571|ref|ZP_11354067.1| helicase [Glaciecola chathamensis S18K6]
gi|410136981|dbj|GAC12254.1| helicase [Glaciecola chathamensis S18K6]
Length = 1434
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 230/481 (47%), Gaps = 35/481 (7%)
Query: 166 IPAHIESKLLPFQRDGVRFA--LQH-GGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
IP+ +++L +Q G +A L H G LAD+MGLGKT+QA+A+ + P L++
Sbjct: 959 IPSTFQAQLRDYQLVGFDWASRLAHWGAGACLADDMGLGKTLQALAILLSRANEGPSLVI 1018
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+S+ +W Q+ L P+ I+ V + +N ++ S P D + IIS
Sbjct: 1019 APTSVCFNWQ---QEALKFAPTLIIKVFA--DSTNTIAREVLLSELG---PFDCV--IIS 1068
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
Y ++ + IL + ++ADE+ LKN AKRT A + K+ + ++ +GTP +
Sbjct: 1069 YGLLQRESEILKKVQWHSIVADEAQALKNPLAKRTKAAYAL--KSDFKMITTGTPIENNL 1126
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYC---KGGVFGIYQGASNHEELHNLMKATVMIRRLK 399
EL+ + P + N+ + R+ + + L L++ ++ RR+K
Sbjct: 1127 TELWSLFRFINPGLLGNIKRFAQRFSLPIENAQEDPLAARKASQALKTLIQPFIL-RRMK 1185
Query: 400 KDVLAQLPVKRRQQVFLDVA--EKDMRQIYALFRELEVVKGKIKACKSEEEVQSL----K 453
VL +LP + + ++++ E+D + L + + +A SE+ ++ L K
Sbjct: 1186 NQVLTELPSRTEINIRVEMSSQERDFYEALRLNAIDNINQSGQQANASEQRIRMLAELVK 1245
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKF-----LIFAHHQPMLDAIHQLFLK 508
+ K+ AE IP+ + K LIF+ L I Q
Sbjct: 1246 LRQACCNPKLVM--AETTIPSAKLAALDALLEELKLNNHKALIFSQFVGHLQLIKQHLED 1303
Query: 509 KKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAAVLSMKAGGVGLTLTAASTVIFAELSW 567
K +DG TP RQA V FQ + D+ ++S+KAGG GL LTAA VI + W
Sbjct: 1304 KGFDYQYLDGSTPQKQRQASVNAFQRGQGDI--FLISLKAGGSGLNLTAADYVIHMDPWW 1361
Query: 568 TPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
P QA DRAHRIGQ+ V +Y L+ +T+++ + + + K + +L G+E S ++
Sbjct: 1362 NPAVEEQASDRAHRIGQLRPVTIYRLITQNTIEEKIVALHKQKRDLADNLLAGNEASAKL 1421
Query: 628 S 628
S
Sbjct: 1422 S 1422
>gi|383785591|ref|YP_005470161.1| DNA/RNA helicase, SNF2 family [Leptospirillum ferrooxidans C2-3]
gi|383084504|dbj|BAM08031.1| putative DNA/RNA helicase, SNF2 family [Leptospirillum ferrooxidans
C2-3]
Length = 1381
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 236/472 (50%), Gaps = 39/472 (8%)
Query: 166 IPAHIESKLLPFQRDGV----RFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
+P+ ++++L +Q +G R A + G LAD+MGLGKT+QAIAV P+++
Sbjct: 918 LPSTLQAELRDYQLEGFLWMSRLA-EWGAGACLADDMGLGKTVQAIAVMLDRAPSGPIIV 976
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
+ P+S+ +W+A I ++ PS V VL + +R S + PLD L I
Sbjct: 977 VAPTSVCSNWSAEIARF---APSLNVHVLRE--AQDRI------SRVEGLGPLDVL--IA 1023
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSR 341
SY ++ + +L +++ + + DE+ KNA+ KR A I +A + L LSGTP +
Sbjct: 1024 SYGLLAMEEELLSKTSWTMAVFDEAQAFKNAETKRAQAARKI--QADFRLALSGTPIEND 1081
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNH--EELHNLMKATVMIRRLK 399
EL+ A+ P + + + +R+ I +G L +L++ M+RR K
Sbjct: 1082 LDELWSLFSAINPLLLGSRERFQSRFSGP----IERGKDTRVLASLRSLVRP-FMLRRTK 1136
Query: 400 KDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE--LEVVK--GKIKACKSEEEVQSLKFT 455
VL++LP + + +++ D R Y R+ LE + G+ K + + +
Sbjct: 1137 SMVLSELPPRTEVTIKVELP-SDERVFYEALRQSALEALSSLGEEKGVQRIHILAEITKL 1195
Query: 456 EKNLINKIYTDSAE----AKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKV 511
+ L + D AK+ A L+ + +++ K L+F+ L+ + + + +
Sbjct: 1196 RRALCHPSLVDPGSLLPGAKLTAFLELSDELLKNRHKALVFSQFTGQLEQVAKALDARGI 1255
Query: 512 HCIRIDGGTPPASRQALVTEFQE-KDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPG 570
+DG T P R+ V++FQ K D+ ++S++AGG GL LTAA VI + W P
Sbjct: 1256 SYQYLDGSTSPKEREKRVSDFQSGKGDL--FLISLRAGGTGLNLTAADYVIHLDPWWNPA 1313
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
QA DRAHRIGQ V +Y L+A ++++ + D+ + K + +L+G E
Sbjct: 1314 VEDQASDRAHRIGQQRPVTIYRLIATQSIEEKILDLHKRKRDLASDLLEGSE 1365
>gi|256075325|ref|XP_002573970.1| excision repair helicase ercc-6-related [Schistosoma mansoni]
Length = 1323
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/512 (26%), Positives = 228/512 (44%), Gaps = 89/512 (17%)
Query: 166 IPAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR-------- 214
+P I S+L +QR GV++ Q G ++ DEMGLGKTIQ IA+
Sbjct: 199 VPGSIWSRLFDYQRKGVKWLWDLHQKGCGGIIGDEMGLGKTIQIIALLAGLHYSNIEDRS 258
Query: 215 -DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSG--FTIVSSNTKRN 271
+ P LI+ P+++ W + W PP + ++ S G + ++++N
Sbjct: 259 YRLGPTLIVCPATVLNQWMSEFHSWW--PPIRVAILHSTGSGYGKPNKLIQMITNNP--- 313
Query: 272 IPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
G + +Y ++ +++L S N+ VI DE H +KN +A+ T A + L
Sbjct: 314 ----GSVLLTTYSTLVTYRDMLTSRNWSYVILDEGHKIKNPEAEATLAVKHF--STPHRL 367
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRY----CKGG--------VFGIYQGA 379
+LSG+P + EL+ + + P + E+ ++ +GG V YQ A
Sbjct: 368 ILSGSPIQNNLRELWSLFDFVCPGRLGPLPEFMQQFSIPITQGGYAAASPLQVETAYQCA 427
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVK-- 437
L NL+K +IRRLK DV QLP K Q +F + + +++Y + E +V K
Sbjct: 428 CT---LRNLLKP-YLIRRLKADVQIQLPAKSEQVLFCRLTDY-QQKLYREYLESQVCKDL 482
Query: 438 --------------------------GKIKACKSEEEVQSLKFTEKNLI-----NKIYTD 466
G +C EE +S K +N+ ++
Sbjct: 483 LNGKGNIFPSLILLRNLCNHPDLATGGPRDSCFLNEEFESDKQGIENVCLSYSWSRFGCP 542
Query: 467 SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQ 526
+K+ V L+ + G K L+F+ + ML + +L K +R+DG TP + R
Sbjct: 543 RRSSKMLVVASLLKNWYDQGHKVLLFSQSRRMLTLLERLVQLMKFSYLRMDGTTPVSQRH 602
Query: 527 ALVTEFQEKD--------------DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
L+ F + D+ +L+ + GG+G+ LT+A+ V+ + W P
Sbjct: 603 ELIRRFNYRSTSDSEKIDRTSDHLDIFLFLLTTRVGGLGVNLTSANRVLIYDPDWNPTTD 662
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVW 604
+QA +RA RIGQ V +Y LL + T+++ ++
Sbjct: 663 LQARERAWRIGQSRDVVIYRLLTSGTIEEKIY 694
>gi|360044828|emb|CCD82376.1| excision repair helicase ercc-6-related [Schistosoma mansoni]
Length = 1393
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/512 (26%), Positives = 228/512 (44%), Gaps = 89/512 (17%)
Query: 166 IPAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR-------- 214
+P I S+L +QR GV++ Q G ++ DEMGLGKTIQ IA+
Sbjct: 269 VPGSIWSRLFDYQRKGVKWLWDLHQKGCGGIIGDEMGLGKTIQIIALLAGLHYSNIEDRS 328
Query: 215 -DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSG--FTIVSSNTKRN 271
+ P LI+ P+++ W + W PP + ++ S G + ++++N
Sbjct: 329 YRLGPTLIVCPATVLNQWMSEFHSWW--PPIRVAILHSTGSGYGKPNKLMQMITNNP--- 383
Query: 272 IPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
G + +Y ++ +++L S N+ VI DE H +KN +A+ T A + L
Sbjct: 384 ----GSVLLTTYSTLVTYRDMLTSRNWSYVILDEGHKIKNPEAEATLAVKHF--STPHRL 437
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRY----CKGG--------VFGIYQGA 379
+LSG+P + EL+ + + P + E+ ++ +GG V YQ A
Sbjct: 438 ILSGSPIQNNLRELWSLFDFVCPGRLGPLPEFMQQFSIPITQGGYAAASPLQVETAYQCA 497
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVK-- 437
L NL+K +IRRLK DV QLP K Q +F + + +++Y + E +V K
Sbjct: 498 CT---LRNLLKP-YLIRRLKADVQIQLPAKSEQVLFCRLTDY-QQKLYREYLESQVCKDL 552
Query: 438 --------------------------GKIKACKSEEEVQSLKFTEKNLI-----NKIYTD 466
G +C EE +S K +N+ ++
Sbjct: 553 LNGKGNIFPSLILLRNLCNHPDLATGGPRDSCFLNEEFESDKQGIENVCLSYSWSRFGCP 612
Query: 467 SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQ 526
+K+ V L+ + G K L+F+ + ML + +L K +R+DG TP + R
Sbjct: 613 RRSSKMLVVASLLKNWYDQGHKVLLFSQSRRMLTLLERLVQLMKFSYLRMDGTTPVSQRH 672
Query: 527 ALVTEFQEKD--------------DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
L+ F + D+ +L+ + GG+G+ LT+A+ V+ + W P
Sbjct: 673 ELIRRFNYRSTSDSEKIDRTSDHLDIFLFLLTTRVGGLGVNLTSANRVLIYDPDWNPTTD 732
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVW 604
+QA +RA RIGQ V +Y LL + T+++ ++
Sbjct: 733 LQARERAWRIGQSRDVVIYRLLTSGTIEEKIY 764
>gi|344244841|gb|EGW00945.1| Zinc finger Ran-binding domain-containing protein 3 [Cricetulus
griseus]
Length = 723
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 105/156 (67%), Gaps = 1/156 (0%)
Query: 474 AVLDYLETVIE-AGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
AV DY++ +++ KFL+FAHH ML A + ++ K IRIDG P + R LV +F
Sbjct: 13 AVKDYIKMLLQNESLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVPSSERIHLVNQF 72
Query: 533 QEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYY 592
Q+ + + A+LS++A G GLT TAAS V+FAEL W PG + QAEDRAHRIGQ SSVN++Y
Sbjct: 73 QKDPNTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHY 132
Query: 593 LLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
L+AN T+D ++W ++ K + G L+G + L+ +
Sbjct: 133 LIANGTLDSLMWAMLNRKAQVTGSTLNGRKERLQAT 168
>gi|451820023|ref|YP_007456224.1| superfamily II DNA/RNA helicase, SNF2 family [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451786002|gb|AGF56970.1| superfamily II DNA/RNA helicase, SNF2 family [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 1088
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 140/480 (29%), Positives = 245/480 (51%), Gaps = 40/480 (8%)
Query: 154 SAAPDLREKYDQIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIA 208
S ++++K Q P ++++L +Q+DG + L GG +L DEMGLGKT+QAI
Sbjct: 607 SRLKNIKDKVFQPPYGLQAQLREYQKDGYNWFRTLDYLGFGG--ILGDEMGLGKTLQAIT 664
Query: 209 VATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNT 268
+ LI+ P+SL +W +++ PS + + G ++
Sbjct: 665 FLLS-KPNSKTLIIAPTSLIYNWKNEFKKF---APS---LKIGISNGVREEREKLIEKYD 717
Query: 269 KRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQ 328
K ++ L +N++ D L+L N+ F I DE+ +KN Q+ +A ++ IK A+
Sbjct: 718 KFDVIL-TTYNLLRRD--LELYNM----EFDYCILDEAQNIKN-QSSLSAKSVKDIK-AK 768
Query: 329 YALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNL 388
L+GTP + +EL+ + + P N ++ RY + + +G EEL+ L
Sbjct: 769 IKFALTGTPIENSLMELWSIFDFIMPGYLYNEKKFVTRYFRR----LEEGPEILEELNRL 824
Query: 389 MKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL--EVVKGKI---KAC 443
K ++ RR KKDV+ +LP K +++F+ +++ + + +Y + ++++ K+ +
Sbjct: 825 TKPFIL-RRYKKDVIKELPDKIEKRLFVPLSD-EQKVVYETYSNYARDLIQKKVDDFEFA 882
Query: 444 KSEEEVQSL--KFTEKNLINKIYTDS---AEAKIPAVLDYLETVIEAGCKFLIFAHHQPM 498
KS+ E+ S K + L + D+ A KI A+++ LE IE G K L+F+ +
Sbjct: 883 KSKIEILSYITKLRQICLDPSVTMDNYSGASGKIDALIELLEQSIEEGHKILVFSQFTSV 942
Query: 499 LDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAS 558
L I ++ +K +DG +R +V EF ++ ++S+KAGG GL LT+A
Sbjct: 943 LKNIGKILSEKHFLYSYLDGAVSSINRMKMVDEFNNGEN-PVFLVSLKAGGTGLNLTSAD 1001
Query: 559 TVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
VI + W P QA DRAHRIGQ + V V L+A T+++ + ++ SK E + +VL
Sbjct: 1002 IVIHFDPWWNPAVEDQATDRAHRIGQKNIVEVIKLIAEGTIEEKIMELQDSKRELINKVL 1061
>gi|392570578|gb|EIW63750.1| SNF2 family DNA-dependent ATPase [Trametes versicolor FP-101664
SS1]
Length = 1030
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 224/478 (46%), Gaps = 42/478 (8%)
Query: 163 YDQIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATC---FRDV 216
+++ P+ I + P+Q G+ + +L H G +LADEMGLGKT+Q I+ + +RD
Sbjct: 117 FEESPSFINGTMRPYQLQGLNWMVSLHHNGLNGILADEMGLGKTLQTISFLSYLKHYRDT 176
Query: 217 -WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P L++ P S +W+ + W P V+L+ GS I+++ R IP D
Sbjct: 177 SGPHLVVVPKSTLQNWSREFEHWT---PDVSTVLLT---GSKEERAEIIAT---RLIPQD 227
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
I +Y+ L Q+ L +F+ ++ DE+H +KN + + + + + LL++G
Sbjct: 228 FDVLITTYEQCLIEQSALKKFSFEYIVIDEAHRIKNVDSILSKIVRSFLSRGR--LLITG 285
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNH---EELHNLMKAT 392
TP + ELF L + P+++ + + + K G + E LH +++
Sbjct: 286 TPLQNNMKELFALLNFICPEIFSDYEDLESFLHKDDAQGDGDDEKSKKVVEALHKILRP- 344
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKIKACKSEEEVQ 450
++RR+K DV L K+ +++ + E R+ Y L ++++ V G + + +
Sbjct: 345 FLLRRVKSDVEKNLLPKKEINIYVGLTEM-QRKWYRSVLEKDIDAVNGLTGKKEGKTRLM 403
Query: 451 SLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAH 494
++ + + Y D AE P D L+ + G + LIF+
Sbjct: 404 NIVMQLRKVTCHPYLFDGAEPGPPYTTDEHLVDNSGKMVILDKLLQNMKAKGSRVLIFSQ 463
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLT 553
MLD + L ++ RIDG T R + E+ + D K +L+ +AGG+G+
Sbjct: 464 MSRMLDILEDYCLFRQYKYCRIDGSTAHEDRIVAIDEYNKPDSEKFIFLLTTRAGGLGIN 523
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
LT A V+ + W P +QA DRAHRIGQ V V+ + +V++ + + KL
Sbjct: 524 LTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITEGSVEERMLERAAQKL 581
>gi|430761012|ref|YP_007216869.1| SNF2-related protein [Thioalkalivibrio nitratireducens DSM 14787]
gi|430010636|gb|AGA33388.1| SNF2-related protein [Thioalkalivibrio nitratireducens DSM 14787]
Length = 1079
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 237/503 (47%), Gaps = 48/503 (9%)
Query: 151 ASASAAPDLREKYDQIPAH---IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAI 207
A A A ++RE+ D H I ++L P+Q +GV F L GR LLAD+MGLGKT+QAI
Sbjct: 310 ARAVRAAEIRERIDSGGGHLPGIRARLHPYQAEGVAF-LAGRGRALLADDMGLGKTLQAI 368
Query: 208 AVATCFRD---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIV 264
A A R V VL++ P+SL+L WA I+++ + + + G R+
Sbjct: 369 ASAYWMRQHDGVERVLVVCPASLKLQWAREIEKFTGLEAQVVQGPVDTRGAQYRNPSP-- 426
Query: 265 SSNTKRNIPLDGLFNIISYDVVLK-LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPI 323
F++++Y++V++ L I + ++I DE+ +KN + K +A +
Sbjct: 427 -------------FHVVNYELVMRDLPVINDTLRPDLLILDEAQRIKNWRTKIASAVKRV 473
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE 383
+++YA +L+GTP +R +L+ ++ + V + Y + G G N
Sbjct: 474 --QSRYAFVLTGTPLENRLEDLYSLMQVIDSRVLGPLWRYLVDFHVTDDRGKVLGYRNLS 531
Query: 384 ELHNLMKATVMIRRLKKDVLAQLP---VKR-------RQQVFLDVAEKDMRQIYALFREL 433
EL ++ VM+RR + V QLP V+R Q+ + A K Q+ + R
Sbjct: 532 ELRRRLR-PVMLRRDRSLVRDQLPERIVQRIDVPMSGEQEGIHEAALKAAGQLAQIMRRR 590
Query: 434 EVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIE-----AGCK 488
+ + + + + L++K S + LD LET+++ AG K
Sbjct: 591 PLTPSEQNRMLAALQQARMACDAAGLVDKETDGSPK------LDELETLLDELCRSAGLK 644
Query: 489 FLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAG 548
++F+ + M + Q + + +R+ GG P R AL+ F+E D V+ LS AG
Sbjct: 645 AVVFSQWERMTEMAEQRVRRLGLGSVRLHGGVPTQKRGALMDRFREDDAVQV-FLSTDAG 703
Query: 549 GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVR 608
GVGL L A+ +I ++ W P L Q R HR+GQ V L+A + ++ V +V
Sbjct: 704 GVGLNLQNAAVLINLDIPWNPAVLDQRIARVHRLGQKQKVQAILLVAPGSYEERVLGLVE 763
Query: 609 SKLENLGQVLDGHENSLEVSSSQ 631
K + V+D VS S+
Sbjct: 764 GKRQLFDNVVDPEATEEVVSVSR 786
>gi|443894508|dbj|GAC71856.1| chromatin remodeling complex WSTF-ISWI, small subunit [Pseudozyma
antarctica T-34]
Length = 1106
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 228/480 (47%), Gaps = 51/480 (10%)
Query: 163 YDQIPAHIESKLL-PFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDVWP 218
+++ PA+++ + +Q G+ + +L H G +LADEMGLGKT+Q I+ RD
Sbjct: 217 FNESPAYVKGGTMRDYQVQGLNWMISLYHNGINGILADEMGLGKTLQTISFLGYLRDFRN 276
Query: 219 V----LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
L++ P S +W Q+W +P +V L GS ++ K +P
Sbjct: 277 TPGFHLVVVPKSTLDNWYREFQRW--VPGFNVVT----LKGSKEERDEVIH---KHLLPQ 327
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
D I +Y++ L+ ++ L +++ +I DE+H +KN + + +++ LL++
Sbjct: 328 DFDVLITTYEMCLREKSALKKLSWEYIIIDEAHRIKNVDSMLSQIVRAFNSRSR--LLIT 385
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE----LHNLMK 390
GTP + +EL+ L L PDV+ N ++ + + KG +G N ++ LH +++
Sbjct: 386 GTPLQNNLMELWSLLNFLLPDVFSNSEDFES-WFKG------KGDENQDQVVQQLHKVLR 438
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
++RR+K DV L K+ +F+ + E R+ Y L ++++ V G + + +
Sbjct: 439 P-FLLRRVKADVEKSLLPKKEINLFVGLTEM-QRKWYKSILEKDIDAVNGGVGKKEGKTR 496
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIF 492
+ ++ + N Y D AE P D L + G + LIF
Sbjct: 497 LLNIVMQLRKCCNHPYLFDGAEPGPPFTTDEHLVFNSDKMKKLDKLLRKMKANGSRVLIF 556
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVG 551
+ MLD + L + RIDGGT R A + E+ + K +L+ +AGG+G
Sbjct: 557 SQMSRMLDILEDYCLFRDYAYCRIDGGTAHEDRIAAIDEYNKPGSEKFVFLLTTRAGGLG 616
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ LT A V+ + W P +QA DRAHRIGQ V V+ + + +++ + + KL
Sbjct: 617 INLTTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVYVFRFVTENAIEERILERAAQKL 676
>gi|125995400|ref|NP_001075098.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Danio rerio]
gi|124481629|gb|AAI33098.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Danio rerio]
Length = 1028
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 238/493 (48%), Gaps = 53/493 (10%)
Query: 150 IASASAAPDLREKYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
++ S A + ++D P+++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 131 LSENSKATSVCTRFDDSPSYVKTGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 190
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W ++W +P + V ++ R+ F
Sbjct: 191 TISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRW--VPSLKAVCLIGDR--EERTAF 246
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R+ L G +++ SY++++ + + N++ ++ DE+H +KN ++K +
Sbjct: 247 I-------RDTLLPGEWDVCVTSYEMLIIERAVFKKFNWRYLVIDEAHRIKNEKSKLSEI 299
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + G +
Sbjct: 300 VREF--KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDAWFDTNNCLGDTKLV 357
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV L K+ ++++ ++ K R+ Y L ++++++
Sbjct: 358 ---ERLHTVLRP-FLLRRIKADVEKSLLPKKEIKIYVGLS-KMQREWYTKILMKDIDILN 412
Query: 438 --GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------L 479
GK+ + + L+ N Y D AE P D L
Sbjct: 413 SAGKMDKMRLLNVLMQLR----KCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVVLDKLL 468
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
+ E G + LIF+ +LD + + + R+DG TP RQ + F E + K
Sbjct: 469 PKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSK 528
Query: 540 AA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ V V+ + ++T
Sbjct: 529 FLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNT 588
Query: 599 VDDIVWDVVRSKL 611
V++ + + KL
Sbjct: 589 VEERIVERAEMKL 601
>gi|381395125|ref|ZP_09920831.1| helicase [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379329224|dbj|GAB55964.1| helicase [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 1428
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 149/524 (28%), Positives = 237/524 (45%), Gaps = 69/524 (13%)
Query: 142 LHPLVQRAIASASAAPDLR--EKYDQ--------------IPAHIESKLLPFQRDGVRFA 185
HPL + A+A ++ +DQ IP+ +++L +Q G +A
Sbjct: 913 FHPLASLQMEEATAGMRMKTIHAWDQQSKKMHEANTIKPKIPSTFQAQLRDYQLVGFDWA 972
Query: 186 --LQH-GGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHW---AAMIQQWL 239
L H G LAD+MGLGKT+QA+AV + P L++ P+S+ +W A L
Sbjct: 973 SRLAHWGAGACLADDMGLGKTLQALAVLLARANKGPSLVIAPTSVCFNWQQEACKFTPTL 1032
Query: 240 NI---PPSEIVV----VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNI 292
NI S + +LSQLG P D + IISY ++ + +I
Sbjct: 1033 NIRLFADSNTTLQREELLSQLG------------------PFDCV--IISYGLLQRESDI 1072
Query: 293 LMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEAL 352
L + +IADE+ +KN AKRT A + K + ++ +GTP + EL+ +
Sbjct: 1073 LKEVQWHTIIADEAQAIKNPLAKRTKAAYAL--KGDFKMITTGTPIENDLTELWSLFRFI 1130
Query: 353 YPDVYKNVHEYGNRYC---KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVK 409
P + NV +G R+ + + + L L++ M+RR+K VL +LP
Sbjct: 1131 NPGLLGNVKRFGTRFSLPIENAKEKPLEARKASQGLKALIQP-FMLRRMKNQVLTELP-- 1187
Query: 410 RRQQVFLDVAEKDMRQIYALFRELEVV----KGKIKACKSEEEVQSL----KFTEKNLIN 461
R ++ + V D Q + L + +G + E+ ++ L K +
Sbjct: 1188 SRTEINIPVKMSDKEQAFYEALRLNAIDNISQGGQTSKPGEQRIRMLAELVKLRQACCNP 1247
Query: 462 KIY---TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDG 518
K+ TD AK+ A+ + L + K LIF+ L I Q K + +DG
Sbjct: 1248 KLVMAETDIPSAKLAALDELLTELKLNNHKALIFSQFVGHLKLIKQHIESKGLSYQYLDG 1307
Query: 519 GTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDR 578
TP RQ V FQ + ++S+KAGG GL LTAA VI + W P QA DR
Sbjct: 1308 STPQKDRQKHVNAFQNGEG-DVFLISLKAGGSGLNLTAADYVIHMDPWWNPAVENQASDR 1366
Query: 579 AHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
AHR+GQ V +Y L+ +T+++ + + + K + ++L G+E
Sbjct: 1367 AHRMGQKRPVTIYRLITQNTIEEKIVALHQHKRDLADKLLSGNE 1410
>gi|432950977|ref|XP_004084701.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Oryzias latipes]
Length = 996
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 242/502 (48%), Gaps = 61/502 (12%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAV---ATCFR 214
++D P+++++ K+ +Q G+ + + ++G +LADEMGLGKT+Q IA+ +R
Sbjct: 153 RFDDSPSYVKAGKMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTIALLGYMKHYR 212
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
++ P ++L P S +W ++W+ PS V L +G N I R++
Sbjct: 213 NIPGPHMVLVPKSTLYNWMNEFKRWV---PSLRAVCL--IGDRNERTALI------RDVL 261
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
L G +++ SY++++ + + N++ ++ DE+H +KN ++K + K L
Sbjct: 262 LPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF--KTTNRL 319
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
LL+GTP + EL+ L L PDV+ + ++ + + G + E LH +++
Sbjct: 320 LLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLV---ERLHTVLRP 376
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK--GKIKACKSEE 447
++RR+K DV L K+ ++++ ++ K R+ Y L ++++++ GK+ +
Sbjct: 377 -FLLRRIKADVEKTLLPKKEVKIYVGLS-KMQREWYTKILMKDIDILNSAGKMDKMRLLN 434
Query: 448 EVQSLKFTEKNLINKIYT-DSAEAKIPAVLDYLETVIEAG----------------CKFL 490
+ L+ N Y D AE P D L V+ +G + L
Sbjct: 435 VLMQLR----KCCNHPYLFDGAEPGPPYTTD-LHLVVNSGKMVVLDKLLPKMKVQGSRVL 489
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGG 549
IF+ +LD + + + R+DG TP RQ + + E + K +LS +AGG
Sbjct: 490 IFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHEERQISINAYNEPNSTKFIFMLSTRAGG 549
Query: 550 VGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRS 609
+G+ L A VI + W P +QA DRAHRIGQ V V+ + +TV++ + +
Sbjct: 550 LGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVEERIVERAEM 609
Query: 610 KLE------NLGQVLDGHENSL 625
KL G+++D N L
Sbjct: 610 KLRLDSIVIQQGRLVDPSANKL 631
>gi|320354706|ref|YP_004196045.1| SNF2-like protein [Desulfobulbus propionicus DSM 2032]
gi|320123208|gb|ADW18754.1| SNF2-related protein [Desulfobulbus propionicus DSM 2032]
Length = 1363
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/494 (26%), Positives = 239/494 (48%), Gaps = 43/494 (8%)
Query: 155 AAPDLREKYDQIPAHIESKLLPFQRDGVRFA--LQH-GGRILLADEMGLGKTIQAIAVAT 211
A + +E ++P+ ++++L +QR+G + L H G LAD+MGLGKT+Q+IAV
Sbjct: 890 AIAEAQEMTPKVPSTLKAELREYQREGFVWMSRLAHLGVGACLADDMGLGKTLQSIAVIL 949
Query: 212 CFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRN 271
P L++ P+S+ ++W ++++ P+ + S+ +N
Sbjct: 950 SLAHQGPSLVVAPTSVCMNWETEVRRF---APTLTFHMFSE-------------ANRDEI 993
Query: 272 IPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQY 329
IP G F+++ SY ++ + +L ++ ++ DE+ +KNA KR+ A + + ++
Sbjct: 994 IPTLGKFDLLVTSYTLLQQEIELLAQVKWQSIVLDEAQAIKNAATKRSKAAMRL--DGRF 1051
Query: 330 ALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLM 389
L+ +GTP + EL+ + P + ++ R FGI + E +
Sbjct: 1052 RLITTGTPIENHLGELWNLFSFINPGLLGTYKQFNRR------FGIPIEKHHDREARRTL 1105
Query: 390 KATV---MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE--LEVVKGKIKACK 444
K + M+RR+K VL +LP + + +++ +++ Q Y R+ +E ++G +
Sbjct: 1106 KKLIRPFMLRRIKSQVLEELPPRTEITLRVEMQPQEL-QFYEALRQQAIENIEGSSEKTG 1164
Query: 445 SE----EEVQSLKFTEKN--LINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPM 498
E+ L+ N LIN D K+ + +E ++ G K LIF+
Sbjct: 1165 RHLRILAEIMRLRRACCNPRLIND-QVDIPSTKLQVFAETVEELLGGGHKALIFSQFTGH 1223
Query: 499 LDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAS 558
L I + + +DG TP RQ V FQ + ++S+KAGG+GL LTAA
Sbjct: 1224 LALIRDFLDDRGISYKYLDGTTPAKERQQQVERFQAGEG-DLFLISLKAGGLGLNLTAAD 1282
Query: 559 TVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
VI + W P QA DRA+RIGQ V VY L+ +T+++ + + + K + +L
Sbjct: 1283 YVIHMDPWWNPAVEDQAADRAYRIGQKRPVTVYRLVTANTIEEKIVRLHQEKRDLANSLL 1342
Query: 619 DGHENSLEVSSSQI 632
+G + S +S+ ++
Sbjct: 1343 EGADVSSRISAEEL 1356
>gi|294056083|ref|YP_003549741.1| SNF2-like protein [Coraliomargarita akajimensis DSM 45221]
gi|293615416|gb|ADE55571.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221]
Length = 1133
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 135/478 (28%), Positives = 222/478 (46%), Gaps = 58/478 (12%)
Query: 165 QIPAHIESKLLPFQRDG---VRFALQHGGRILLADEMGLGKTIQAIA-VATCFRD----- 215
Q P + ++L P+Q +G + F +H LAD+MGLGKT+QAIA +A C +
Sbjct: 669 QQPTTVLAELRPYQLEGCAWIDFLYRHRFGACLADDMGLGKTLQAIAFIAKCLDERQSTQ 728
Query: 216 VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNR-SGFTIVSSNTKRNIPL 274
PVLI+ P+SL +W ++ P ++V L + S+ +G ++
Sbjct: 729 SAPVLIVLPTSLVFNWTDEFARF--APSLQVVACLRKSDWSDALTGGQVI---------- 776
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
+ +YD V Q L F +V+ DE+H LKN A RT A + + K ++ L L+
Sbjct: 777 -----LTTYDRVRLDQRELSLHEFDVVVFDEAHNLKNVAAARTKAAIEL--KRRFTLCLT 829
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVM 394
GTP + E + L A P ++ ++ + + + E + K ++
Sbjct: 830 GTPVENNASEYYSVLSASVPGIFGSLKSFKESF-----------RTAPERILARAKPFIL 878
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKF 454
RR K+ +L +LP K ++FL+++ ++IY R + V+ +I A ++ Q
Sbjct: 879 -RRTKQALLTELPAKEEHELFLEMSAVQ-KEIYT--RTVAEVREEIAAAYDDQPEQQAGI 934
Query: 455 T-------------EKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDA 501
L+ K + A K + D LE + G L+F+ LD
Sbjct: 935 VALAAILRLRQVCVSPELLGKQLPEPA-PKFVYMGDRLEELQAEGNAALVFSQFIGGLDQ 993
Query: 502 IHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVI 561
+ + ++ V +R+DG TP R+ +V FQ D +S+K GGVGL LT A+ V
Sbjct: 994 MEAIARERGVDYLRMDGRTPVGQRREIVRSFQSGDGPSFFFISLKTGGVGLNLTRANYVF 1053
Query: 562 FAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
+ W P QA DRAHRIGQ SV V L+ +++ + ++ K E Q++D
Sbjct: 1054 HLDPWWNPAVENQASDRAHRIGQTRSVFVQRLIMQHSIEARMLELKARKAELFRQLVD 1111
>gi|425446891|ref|ZP_18826888.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC 9443]
gi|389732696|emb|CCI03398.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC 9443]
Length = 1390
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 138/532 (25%), Positives = 249/532 (46%), Gaps = 43/532 (8%)
Query: 113 RLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIES 172
R F P LS + + ++ +NL QR S P ++P+ +++
Sbjct: 883 RFHPFAAPILSELTEEVGQLKADKRWRDNL----QRFQESQDFTP-------EVPSTLQA 931
Query: 173 KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+L +Q +G R+ Q G LAD+MGLGKT+QA+AV P L + P+S+ L
Sbjct: 932 ELRDYQLEGFRWLARLAQWGAGACLADDMGLGKTLQALAVILTRASEGPTLAIAPTSVCL 991
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK- 288
+W + +++ P I+ QLG +R R P D L + SY ++ +
Sbjct: 992 NWISEAERF--APTLNII----QLGTGDRQALL------DRLQPFDLL--VCSYGLLQQE 1037
Query: 289 -LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFK 347
+ +L ++ ++ DE+ +KN KR+ A + + + + L+ +GTP + EL+
Sbjct: 1038 EVATMLAGVEWRTIVLDEAQAIKNFSTKRSKAAMNL--RGDFKLITTGTPIENHLGELWN 1095
Query: 348 QLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLP 407
+ P + ++ + R+ Y + E+L L++ ++RR K VLA+LP
Sbjct: 1096 LFRFINPGLLGSLESFDRRFAT--PIEKYGDKTAREQLKKLVRP-FLLRRTKNQVLAELP 1152
Query: 408 VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL----KFTEKNLINKI 463
+ V ++++ ++ AL R + + + +Q L K ++
Sbjct: 1153 PRTEILVPIELSVEEKAFYEALRRRALEKLSESDSTAGAKHLQVLAEIMKLRRACCHPQL 1212
Query: 464 YT---DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
D A +K+ + L+ +++ K L+F+ L + ++++ +DG T
Sbjct: 1213 VAPDLDLAGSKLSRFGEILDDLLDNQHKALVFSQFVDHLAIVRSYLDQRQIKYQYLDGST 1272
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P RQ V FQ + ++S+KAGG GL LTAA VI + W P QA DRAH
Sbjct: 1273 PAGDRQKQVKAFQAGEG-DVFLISLKAGGTGLNLTAADYVIHLDPWWNPAVEDQASDRAH 1331
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
RIGQ V +Y L+A DT+++ + D+ K + +L+G + S ++S+ ++
Sbjct: 1332 RIGQKRPVTIYRLVAKDTIEEKIVDLHHHKRDLADSLLEGTDASGKLSTDEL 1383
>gi|170089013|ref|XP_001875729.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82]
gi|164648989|gb|EDR13231.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82]
Length = 1011
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 231/480 (48%), Gaps = 44/480 (9%)
Query: 163 YDQIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAI---AVATCFRDV 216
++ P+ I+ ++ +Q G+ + +L H G +LADEMGLGKT+Q I A +RD+
Sbjct: 117 FETSPSFIKGEMRTYQLQGLNWMVSLHHNGLNGILADEMGLGKTLQTISFLAYLKHYRDI 176
Query: 217 -WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P L++ P S +W ++W P VV L+ G+ I++S R I D
Sbjct: 177 SGPHLVVVPKSTLQNWHREFERW---TPDFNVVTLT---GTKDERAEIIAS---RLITQD 227
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
+ SY++ L ++ L +F+ ++ DE+H +KN + + I + + LL++G
Sbjct: 228 FEVCVTSYEICLIEKSALKKFSFEYIVIDEAHRIKNVDSILSQIVRSFISRGR--LLITG 285
Query: 336 TPALSRPIELFKQLEALYPDV---YKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
TP + ELF L + P++ YK++ + ++ +G + E LH +++
Sbjct: 286 TPLQNNLKELFALLNFICPEIFVDYKDLDSFLHKDSEGTDVEEEKSKKVVEALHKILRP- 344
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKIKACKSEEEVQ 450
++RR+K DV L K+ +++ +AE R+ Y L ++++ V G K E + +
Sbjct: 345 FLLRRVKADVEKNLLPKKEINIYVGLAEM-QRKWYRSVLEKDIDAVNGGCLTGKKEGKTR 403
Query: 451 SLKFT---EKNLINKIYTDSAEAKIP--------------AVLDYLETVIEA-GCKFLIF 492
+ K + D AE P +LD L ++A G + LIF
Sbjct: 404 LMNMVMQLRKVTCHPYLFDGAEPGPPYTTDEHLIQNSGKMVILDKLLANMKAKGSRVLIF 463
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVG 551
+ +LD + L ++ RIDGGT R A + E+ + + +L+ +AGG+G
Sbjct: 464 SQMSRVLDILEDYCLFRQYKYCRIDGGTAHEDRIAAIDEYNKPGSERFIFLLTTRAGGLG 523
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ LT A V+ + W P +QA DRAHRIGQ V V+ + +V++ + + KL
Sbjct: 524 INLTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITEGSVEERMLERAAQKL 583
>gi|297622033|ref|YP_003710170.1| SWI/SNF helicase [Waddlia chondrophila WSU 86-1044]
gi|297377334|gb|ADI39164.1| putative SWI/SNF helicase family protein [Waddlia chondrophila WSU
86-1044]
Length = 868
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 223/484 (46%), Gaps = 65/484 (13%)
Query: 165 QIPAHIESKLLPFQRDGVR---FALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
+I L P+Q+ GV F Q+G +LAD+MGLGKTIQ +A T P L
Sbjct: 420 KIGGRFHGTLRPYQQAGVEWLSFLKQNGFHGILADDMGLGKTIQILAYLTTETGGKPSLC 479
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
+ P+SL +W + + E++V L G RS K+ +P +GL +
Sbjct: 480 VMPTSLLYNWKKEAETFF----PELLVTLHH--GPERS---------KKTLPKEGLI-LT 523
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKN--AQAKRTAATLPIIKKAQYALLLSGTPAL 339
SY +L+ +++ +S F+ + DE+ +KN Q +TA L +A + ++GTP
Sbjct: 524 SYGTLLRDKDLFKASAFQCIFLDEAQVIKNRRTQQFQTACEL----EAVFRCCITGTPVE 579
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT--VMIRR 397
+R ELF L PD+ K + +E + K T ++RR
Sbjct: 580 NRTEELFTHFHFLMPDLLK--------------------GCDPKETSRIKKKTGPFILRR 619
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF--RELEVVKGKIK---ACKSEEEVQSL 452
K++V + LP K Q V++ + E + R +Y F + + KIK A K E+
Sbjct: 620 RKEEVASDLPEKIEQNVWISMPE-NQRTMYDQFAASAQQSLIQKIKLDGAGKHRMEIFET 678
Query: 453 KFTEKNLINKIY----TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLK 508
+ + Y + K+ A++ +ET+ E G K LIF+ ML I + K
Sbjct: 679 LLRLRQICCHPYLVNGQEGTSGKLEALIADMETIKEEGKKALIFSQFTSMLSIIKKSCSK 738
Query: 509 KKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWT 568
+ +DG T R+ V FQ ++ ++S+KAGGVGL LTAA V+ + W
Sbjct: 739 EGWKFCYLDGQT--KERKEQVDHFQTDPEIPFFLISLKAGGVGLNLTAADYVLLFDPWWN 796
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
P QA DRAHRIG+ +V L D++++ + + +K Q+LD E S
Sbjct: 797 PAVERQAIDRAHRIGRKDTVIAKRYLCLDSIEEKMLHLNTAKQHLADQLLD------ETS 850
Query: 629 SSQI 632
QI
Sbjct: 851 DHQI 854
>gi|425462695|ref|ZP_18842162.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC 9808]
gi|389824201|emb|CCI27009.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC 9808]
Length = 1390
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 249/532 (46%), Gaps = 43/532 (8%)
Query: 113 RLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIES 172
R F P LS + + ++ +NL QR S P ++P+ ++
Sbjct: 883 RFHPFAAPILSELSEEVGQLKADKRWRDNL----QRFQESQDFTP-------EVPSTLQV 931
Query: 173 KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+L +Q +G R+ Q G LAD+MGLGKT+QA+AV P L + P+S+ L
Sbjct: 932 ELRDYQLEGFRWLARLAQWGAGACLADDMGLGKTLQALAVILTRASEGPTLAIAPTSVCL 991
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK- 288
+W + +++ P I+ QLG +R R P D L + SY ++ +
Sbjct: 992 NWISEAERF--APTLNII----QLGTGDRQALL------DRLQPFDLL--VCSYGLLQQE 1037
Query: 289 -LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFK 347
+ +L ++ ++ DE+ +KN KR+ A + + + + L+ +GTP + EL+
Sbjct: 1038 EVATMLAGVEWRTIVLDEAQAIKNFSTKRSKAAMNL--RGDFKLITTGTPIENHLGELWN 1095
Query: 348 QLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLP 407
+ P + ++ + R+ Y + E+L L++ ++RR K VLA+LP
Sbjct: 1096 LFRFINPGLLGSLESFDRRFAT--PIEKYGDKTAREQLKKLVRP-FLLRRTKNQVLAELP 1152
Query: 408 VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL----KFTEKNLINKI 463
+ V ++++ ++ AL R + + + +Q L K ++
Sbjct: 1153 PRTEILVPIELSVEEKAFYEALRRRALEKLSESDSTAGAKHLQVLAEIMKLRRACCHPQL 1212
Query: 464 YT---DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
D A +K+ + L+ +++ K L+F+ L I ++++ +DG T
Sbjct: 1213 VAPDLDLAGSKLSRFGEILDDLLDNQHKALVFSQFVDHLAIIRSYLEQRQIKYQYLDGST 1272
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P + RQ V FQ + ++S+KAGG GL LTAA VI + W P QA DRAH
Sbjct: 1273 PASDRQKQVKAFQAGEG-DVFLISLKAGGTGLNLTAADYVIHLDPWWNPAVEDQASDRAH 1331
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
RIGQ V +Y L+A DT+++ + D+ K + +L+G + S ++S+ ++
Sbjct: 1332 RIGQKRPVTIYRLVAKDTIEEKIVDLHHHKRDLADSLLEGTDASGKLSTDEL 1383
>gi|321479460|gb|EFX90416.1| hypothetical protein DAPPUDRAFT_232072 [Daphnia pulex]
Length = 2083
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 233/502 (46%), Gaps = 65/502 (12%)
Query: 158 DLREKYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VA 210
+L K+++ P +I++ L P+Q +G+ R++ G +LADEMGLGKTIQ I +
Sbjct: 802 NLSRKWERQPEYIDASGMALHPYQMEGLNWLRYSWGQGTDTILADEMGLGKTIQTITFLY 861
Query: 211 TCFRD---VWPVLILTPSSLRLHWAAMIQQW---------LNIPPSEIVVVLSQLG---G 255
+ +++ P L+ P S ++W + W + S +V+ +L G
Sbjct: 862 SLYKEGHCRGPFLVAVPLSTIINWEREFETWAPDFYVVTYVGDKDSRVVIREHELSFEEG 921
Query: 256 SNRSG---FTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA 312
+ R G I +++ K ++ L + ++S D L L S + +++ DE+H LKN
Sbjct: 922 AVRGGNKACKIRTNSVKFHVLLTS-YELVSIDAAL-----LNSIEWAVLVVDEAHRLKNN 975
Query: 313 QAK--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG 370
Q+K R + + +Y LLL+GTP + ELF L L PD + ++ + N
Sbjct: 976 QSKFFRILNSYNL----RYKLLLTGTPLQNNLEELFHLLNFLCPDKFNDLLAFTNE---- 1027
Query: 371 GVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI-YAL 429
F + LH+++ M+RRLK DVL +P K V ++++ + Y L
Sbjct: 1028 --FADLAKEEQVKRLHDML-GPHMLRRLKADVLKNMPTKSEFIVRVELSPMQKKYYKYVL 1084
Query: 430 FRELEVVKGK--------------IKACKSEEEVQSLKFTEK-NLINKIYTDSAEAKIPA 474
R E + + +K C + + + E L N +Y +A K
Sbjct: 1085 TRNFEALNSRTGGQQVSLLNIMMDLKKCCNHPYLFPVASQEAPCLQNGMYETTALVKASG 1144
Query: 475 VLDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVT 530
L L ++ E G + LIF+ MLD + ++ RIDGG RQ +
Sbjct: 1145 KLVLLSKMLRVLKEQGHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQDAID 1204
Query: 531 EFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVN 589
F + +LS +AGG+G+ L A TV+ + W P + IQA RAHRIGQ + V
Sbjct: 1205 RFNAPGAPQFVFLLSTRAGGLGINLATADTVVIYDSDWNPHNDIQAFSRAHRIGQANKVM 1264
Query: 590 VYYLLANDTVDDIVWDVVRSKL 611
+Y + ++V++ V V + K+
Sbjct: 1265 IYRFVTRNSVEERVTQVAKKKM 1286
>gi|257791730|ref|YP_003182336.1| Non-specific serine/threonine protein kinase [Eggerthella lenta DSM
2243]
gi|317487799|ref|ZP_07946392.1| SNF2 family domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|325831768|ref|ZP_08164957.1| SNF2 family N-terminal domain protein [Eggerthella sp. HGA1]
gi|257475627|gb|ACV55947.1| Non-specific serine/threonine protein kinase [Eggerthella lenta DSM
2243]
gi|316913074|gb|EFV34590.1| SNF2 family domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|325486437|gb|EGC88887.1| SNF2 family N-terminal domain protein [Eggerthella sp. HGA1]
Length = 1089
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 138/488 (28%), Positives = 224/488 (45%), Gaps = 42/488 (8%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRIL---LADEMGLGKTIQAIAVATC----FRDVWP 218
+P + + L P+Q +G+R+ R L LADEMGLGK++Q IA R V P
Sbjct: 602 VPDQLAATLRPYQAEGLRWMSALADRDLGGILADEMGLGKSVQLIAFLLARQSEARAVGP 661
Query: 219 VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRN-----IP 273
LI+ P+SL +W A +++ P ++ + G+ R I + +R+ +
Sbjct: 662 SLIVCPASLVYNWMAEFERF--APTLDVRAAV----GAKRERMRIRAEACERDARESELA 715
Query: 274 LDGLFN---IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
DG I SYD++ F DE+ ++KN K A + + ++A
Sbjct: 716 RDGRCCDVLITSYDLLRIDAEDFARREFYCCALDEAQYVKNHATKTARAAKRVRARHRFA 775
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
L +GTP +R EL+ + L P + + + + I G + +
Sbjct: 776 L--TGTPMENRLSELWSIFDFLMPGLLGSYMRFREHF----ELDITGGDEDAARRLRSLV 829
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYAL----FRELEVVKGKIKACKSE 446
A M+RRLK DVL LP K V++ + E + +++YA R+ ++ + K
Sbjct: 830 APFMLRRLKADVLQDLPDKLESVVYVPM-EAEQQRLYAAHEQQLRDALTLQKNNRNNKQF 888
Query: 447 EEVQSLKFTEKNLINKIYTD---------SAEAKIPAVLDYLETVIEAGCKFLIFAHHQP 497
E + E + ++ D AK+ A+ + +E+ ++AG K L+F+
Sbjct: 889 HERKVEVLAELTKLRQLCCDPRLLYENYAGHAAKLDAIAEIVESAMDAGEKTLVFSQFTS 948
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
L I ++ V I G TP R LV F + DD ++S+KAGG GL LT A
Sbjct: 949 FLSLIAEVLDAHGVPYFTITGTTPKKRRLDLVNAFND-DDTPVFLVSLKAGGTGLNLTGA 1007
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
S V+ A+ W QA DRAHRIGQ V+V+ ++A DTV++ + + +K + QV
Sbjct: 1008 SVVVHADPWWNAAAQNQATDRAHRIGQTQVVSVHKVIAKDTVEERILHLQDAKTDLADQV 1067
Query: 618 LDGHENSL 625
+ SL
Sbjct: 1068 IGAGGVSL 1075
>gi|410614380|ref|ZP_11325424.1| helicase [Glaciecola psychrophila 170]
gi|410165963|dbj|GAC39313.1| helicase [Glaciecola psychrophila 170]
Length = 1437
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 239/494 (48%), Gaps = 47/494 (9%)
Query: 165 QIPAHIESKLLPFQRDGVRFA--LQH-GGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
QIP+ +++L +Q G +A L H G LAD+MGLGKT+QA+A+ P L+
Sbjct: 961 QIPSTFQAQLRDYQLVGFDWASRLAHWGAGACLADDMGLGKTLQALAILLSRAKQGPSLV 1020
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL--FN 279
+ P+S+ +W Q+ L P+ + + F ++ +R L+ L F+
Sbjct: 1021 IAPTSVCFNWQ---QEALKFAPTLNIKI-----------FADTANTVQRQKLLNELSPFD 1066
Query: 280 --IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
IISY ++ + IL ++ ++ADE+ LKN KRT A + + K+ + ++ +GTP
Sbjct: 1067 CVIISYGLLQREHEILKGVHWHSIVADEAQALKNPLTKRTKAAVAL--KSDFKMITTGTP 1124
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEEL-----HNLMKAT 392
+ EL+ + P + N+ +G R F + +N E L +KA
Sbjct: 1125 IENNLTELWSLFRFINPGLLGNIKRFGER------FSVPIENANEEPLAARKASQALKAL 1178
Query: 393 V---MIRRLKKDVLAQLPVKRRQQVFLDVA--EKDMRQIYALFRELEVVKGKIKACKSEE 447
+ ++RR+K VL +LP + + ++++ E+D + L + + + +A E+
Sbjct: 1179 IQPFILRRMKNQVLTELPSRTEINIRVEMSPQERDFYEALRLNAIDNISQNEQQANAGEQ 1238
Query: 448 EVQSL----KFTEKNLINKIY---TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLD 500
++ L K + K+ TD AK+ A+ + LE + K LIF+ L
Sbjct: 1239 RIKMLAELVKLRQACCHPKLVMAETDIPSAKLAALDELLEELKLNNHKALIFSQFVGHLQ 1298
Query: 501 AIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTV 560
I Q K +DG TP RQ V FQ + ++S+KAGG GL LTAA V
Sbjct: 1299 LIRQHIEAKGFSYQYLDGSTPQKKRQKSVNAFQSGEG-DIFLISLKAGGSGLNLTAADYV 1357
Query: 561 IFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
I + W P QA DRAHRIGQ V +Y L+A +T+++ + + + K + ++L G
Sbjct: 1358 IHMDPWWNPAVEEQASDRAHRIGQTRPVTIYRLIAQNTIEEKIVALHQHKRDLADKLLSG 1417
Query: 621 HENSLEVSSSQIRS 634
+E ++S + S
Sbjct: 1418 NEAVTKLSVDDMLS 1431
>gi|28211487|ref|NP_782431.1| SWF/SNF family helicase [Clostridium tetani E88]
gi|28203928|gb|AAO36368.1| SWF/SNF family helicase [Clostridium tetani E88]
Length = 1093
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 147/524 (28%), Positives = 243/524 (46%), Gaps = 76/524 (14%)
Query: 148 RAIASASAAPDLREKYDQI-------PAHIESKLLPFQRDGVRF-----ALQHGGRILLA 195
+ I ++R+K+ I P ++ L +QR G + L GG +L
Sbjct: 601 KYIKGKKELKEIRDKFKNIEKLKFEEPTNLNGNLRDYQRIGYNWFKTLDYLGFGG--ILG 658
Query: 196 DEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG 255
DEMGLGKTIQAI+ ++ LI+ P+SL +W I ++ PS
Sbjct: 659 DEMGLGKTIQAISFILSNKNS-KSLIVAPTSLIYNW---IDEFEKFAPS----------- 703
Query: 256 SNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHF 308
+V+ N + D + NI +YDV + N+L F I DE+ +
Sbjct: 704 -----LKVVAINGTKEDREDIIKNIGNYDVAITTYNLLKRDLESYNIIEFDHCILDEAQY 758
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
+KN ++ A I K ++AL +GTP + +EL+ + + P + + RY
Sbjct: 759 IKNLNSQNALAVKKIKAKTRFAL--TGTPIENSIMELWSIFDFIMPGYLYDEKRFSVRYN 816
Query: 369 KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLP--VKRRQQVFLDVAEKDMRQI 426
K + + EEL+ L+K ++ RR K VL +LP +++ V LD +K + +
Sbjct: 817 KR----LKESPEVLEELNKLIKPFIL-RRRKNQVLGELPNKIEKTLMVTLDNEQKKVYKA 871
Query: 427 YALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT------------DSAEAKIPA 474
YA + +E+++ K+K ++E + K + I K+ + K+ A
Sbjct: 872 YANY-AMELIEKKVK----DDEFKKSKIAILSYITKLRQLCLDPTVTMKDYNGGNGKMEA 926
Query: 475 VLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE 534
++D L I G + LIF+ +L I + +K+ + +DG P R +V +F
Sbjct: 927 LVDLLLQSIGEGHRILIFSQFTSVLKNIGKRIIKEGIDFSYLDGSIPSEKRMNMVRDF-- 984
Query: 535 KDDVKAAV--LSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYY 592
+D K +V +S+KAGG GL LT+A VI + W P QA DRAHRIGQ + V V
Sbjct: 985 -NDGKNSVFLISLKAGGTGLNLTSADVVIHFDPWWNPAVEDQATDRAHRIGQQNVVEVIK 1043
Query: 593 LLANDTVDD--IVWDVVRSKL--ENLGQVLDGHENSLEVSSSQI 632
++A T+++ I+ + KL E +G L EN ++ +I
Sbjct: 1044 IIAKGTIEEKIILLQEEKKKLISELMGDELSSGENFASLTEEEI 1087
>gi|32475836|ref|NP_868830.1| SWF/SNF family helicase [Rhodopirellula baltica SH 1]
gi|32446379|emb|CAD76207.1| probable swi/snf family helicase 2 [Rhodopirellula baltica SH 1]
Length = 1386
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 235/481 (48%), Gaps = 37/481 (7%)
Query: 165 QIPAHIESKLLPFQRDGVRFA--LQH-GGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
++P + + L +Q DG ++ L H G LAD+MGLGKT+Q +AV P L+
Sbjct: 925 KLPKTLNADLRDYQVDGFKWMSRLAHLGAGACLADDMGLGKTLQCLAVLLNRGKSGPALV 984
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
+ P+S+ +W + I ++ PS ++ S+ ++R T++ S KR++ I
Sbjct: 985 VAPTSVAANWVSEIARF---APSLRPILFSE---ADRE--TVIESLGKRDLL------IC 1030
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSR 341
SY ++ L S ++ ++ DE+ +KNA KR+ A + + +A + ++L+GTP +
Sbjct: 1031 SYGLLANEAEKLQSRRWQTLVLDEAQAIKNADTKRSEAAMGL--EADFRVVLTGTPMENH 1088
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK---ATVMIRRL 398
EL+ + + P + + + R F I + ++ +K A ++RR
Sbjct: 1089 LGELWNLFQFINPGLLGSSESFQER------FAIPIERDHRRDVQRQLKQLIAPFILRRT 1142
Query: 399 KKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL-----EVVKGKIKACKSEEEVQSLK 453
K VL +LP + V +++ E + A+ R+ + + K E+ L+
Sbjct: 1143 KSQVLDELPPRTEITVPIELGEDEAAMYEAMRRKALQNLEDSDDDRPVHIKILAELMRLR 1202
Query: 454 --FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKV 511
+L++ A AK+ D + +IE G K L+F+ L + ++K+
Sbjct: 1203 RFCCHPDLVDPDAGLKA-AKLERFTDTVTDLIEGGHKVLVFSQFVGHLHLLRDRLDERKI 1261
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
+DG TP R+ V FQ+ + ++S+KAGGVGL LTAA VI + W P
Sbjct: 1262 SYQYLDGSTPAKKRKTSVDAFQDGEG-DVFLISLKAGGVGLNLTAADYVIHMDPWWNPAV 1320
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ 631
QA DRAHR+GQ V VY + T+++ + + SK + +L+G E+S ++S+ +
Sbjct: 1321 EDQASDRAHRMGQQRPVTVYRFITTGTIEERILQLHESKRDLADSLLEGTESSAKLSAEE 1380
Query: 632 I 632
+
Sbjct: 1381 L 1381
>gi|226948925|ref|YP_002804016.1| helicase, Snf2 family [Clostridium botulinum A2 str. Kyoto]
gi|226844507|gb|ACO87173.1| helicase, Snf2 family [Clostridium botulinum A2 str. Kyoto]
Length = 1097
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 250/511 (48%), Gaps = 62/511 (12%)
Query: 153 ASAAPDLREKYDQIPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAI 207
+S ++ + Y ++P + + L +Q G R+ ++ GG +LADEMGLGKTIQ I
Sbjct: 626 SSRITNINDGYYEVPKKLNATLREYQIAGYRWMKILSNMKFGG--ILADEMGLGKTIQTI 683
Query: 208 AVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSN 267
+ + LI+TP+SL +W Q++ +EI+ ++G I S
Sbjct: 684 SFLLSEKGN-KSLIVTPTSLIYNWQDEFQKF-----AEIL----KIG-------VIHGSK 726
Query: 268 TKRNIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAAT 320
+R LDG YDV+L L + F I DE +KN A+ T +
Sbjct: 727 EERMKVLDGR---EKYDVLLTTYGTLKNDIQLYKDITFDYCIIDEGQNIKNPLAQSTDSV 783
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGAS 380
I K ++AL +GTP + +EL+ + + P + + ++ I + +
Sbjct: 784 KRINSKVRFAL--TGTPIENNLMELWSIFDFIMPGYLYSEERFQEKF-------IDEVEA 834
Query: 381 NHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKI 440
N +EL L++ ++ RR KKDVL LP K ++ +++ + +IY + ++ +K K+
Sbjct: 835 NIDELKTLIRPFIL-RREKKDVLKDLPHKIEKKFLVEMTT-NQEKIYKAY--MKSIKEKL 890
Query: 441 KACKSEEEVQSLKFTEK--------NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIF 492
K K E+++ + + +LI Y +K+ ++ ++ ++ G K L+F
Sbjct: 891 KNNK-EDKITIFSYLTRLRQLCLDPSLIIDEYK-GGSSKLRIAMELVQEGVDEGKKILLF 948
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGL 552
+ +L I +L K+ + +DG T + R LV EF + VK ++S+KAGG GL
Sbjct: 949 SQFISVLKNISKLLEKEGIEYFYLDGSTNASERIKLVNEFNKNSHVKVFLISLKAGGTGL 1008
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
LT+A+ VI + W P QA DRAHRIGQ + V V L+ T+++ + + K E
Sbjct: 1009 NLTSANLVIHFDPWWNPAIEDQATDRAHRIGQKNLVQVIKLVCKGTIEEKIIMLQEDKKE 1068
Query: 613 NLGQVLDGHENSLEVSSSQIRSSPAKQKTLD 643
+ V++ ++ ++ + ++ +K++ LD
Sbjct: 1069 LINNVMNS-----DLKNAHLINTLSKEEILD 1094
>gi|424862227|ref|ZP_18286173.1| helicase [Rhodococcus opacus PD630]
gi|356660699|gb|EHI41063.1| helicase [Rhodococcus opacus PD630]
Length = 1126
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/479 (27%), Positives = 221/479 (46%), Gaps = 54/479 (11%)
Query: 166 IPAHIESKLLPFQRDGVR---FALQHGGRILLADEMGLGKTIQAIAVATCFRD----VWP 218
+P ++++L P+Q +G R F +HG +LAD+MGLGKT+QA+A+ R P
Sbjct: 658 VPGTLDAQLRPYQLEGFRWLAFLWEHGLGGILADDMGLGKTLQALALICHARQSNPAAPP 717
Query: 219 VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
LI+ P+S+ +W + + P VV +S + ++R +P D L
Sbjct: 718 FLIVAPTSVVSNWES---ESARFAPGANVVAISD-------------TRSRRRVPFDELV 761
Query: 279 N-----IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
+ SY + + S + +I DE+ F KN Q+K + + + L +
Sbjct: 762 EGADIVVTSYTLFRLEFDAYAESAWSGLILDEAQFTKNHQSKIYQCVRRL--ETPFKLAI 819
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT- 392
+GTP + +EL+ L P ++ N + + Y K + + E L L +
Sbjct: 820 TGTPMENNLMELWSLLSITAPGLFPNPARFTDYYRKP-----IEKQGDTELLAQLRRRVK 874
Query: 393 -VMIRRLKKDVLAQLPVK-----------RRQQVFLDVAEKDMRQIYALFRELEVVKGKI 440
+M+RR K+ V+ LP K R ++V+ +++ ++I L +++ K +
Sbjct: 875 PLMLRRTKEQVVKDLPAKQEQVLDVELHPRHRKVYDTHLQRERQKILGLLADVD--KNRF 932
Query: 441 KACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLD 500
+S ++ L + L++ Y D AK+ A+L+ L V+ G + L+F+ L
Sbjct: 933 TILQSLTLLRQLSL-DAGLVDAEYHDVPSAKVDALLEQLADVVAGGHRALVFSQFTGFLG 991
Query: 501 AIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTV 560
I + +DG T R ++ EF+E ++S+KAGG GL LT A
Sbjct: 992 KIRDRLADAGIAHSYLDGST--RRRGDVLREFKEGA-APVFLISLKAGGFGLNLTEADYC 1048
Query: 561 IFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
+ W P QA DRAHRIGQ +V VY L+A DT++D V + K V+D
Sbjct: 1049 FILDPWWNPATEAQAVDRAHRIGQTRNVMVYRLIAKDTIEDKVMALKAKKSALFASVMD 1107
>gi|452822792|gb|EME29808.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria
sulphuraria]
Length = 924
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 222/467 (47%), Gaps = 41/467 (8%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRDV----W 217
++PA I +L P+Q+ GV++ + G ++ DEMGLGKTIQ I +
Sbjct: 189 RLPADIYDRLFPYQQVGVQWLWELHCQGVGGIVGDEMGLGKTIQVIVLLASLSYSHLLPG 248
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
PV I+ P++L W W PS V ++ + G IV +I G
Sbjct: 249 PVCIVAPATLLSQWKREFATWW---PSFRVRIMHKSAGDG--DLWIVE-----DIIEQGD 298
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
+ SY+ V + ++ + VI DE H ++N A+ T K + ++++G P
Sbjct: 299 ILVTSYEQVRRFHEYILVHKWDYVILDEGHRIRNPDAEITLVCKRF--KTVHRIIMTGAP 356
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT----- 392
+R EL+ + +YP + + ++ G Y A+ + +H K
Sbjct: 357 LQNRLKELWSLFDFVYPGKLGTLPVFEEQFSVPITLGSYLNATPLQ-VHTAYKCASVLRN 415
Query: 393 ----VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---RELE-VVKGKIKACK 444
++RRLKKDV QLP K+ Q +F + K+ R++Y + REL+ V++G +
Sbjct: 416 LVSPYLLRRLKKDVALQLPKKQEQILFCKLT-KEQRELYKKYLNSRELQKVLQGSVNMLT 474
Query: 445 SEEEVQSL----KFTEKNLI--NKIYTDSAEAKIPAVLD-YLETVIEAGCKFLIFAHHQP 497
+ ++ + ++N + ++ Y + A VLD L + + + LIF+ +
Sbjct: 475 AVSVLRKICNHPDLYDENALEDDRRYGEWTRAGKLVVLDQVLLSWSKDDSRVLIFSQSRA 534
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
MLD + +++ +R+DG T R L+ F + D+V +L+ K GG+G+ LT A
Sbjct: 535 MLDILEMFARQRRYTYLRMDGETAMQERMKLIDSFNQDDEVFLFLLTTKVGGLGINLTGA 594
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVW 604
+ V+ + W P +QA +RA RIGQ V +Y L+ + T+++ ++
Sbjct: 595 NRVVLYDPDWNPSTDLQARERAWRIGQKRDVIIYRLVTSGTIEEKIY 641
>gi|335306519|ref|XP_003360492.1| PREDICTED: probable global transcription activator SNF2L1 isoform 4
[Sus scrofa]
Length = 1061
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 230/471 (48%), Gaps = 53/471 (11%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 202 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 258
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 259 PSLRVICF--VGDKDARAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 309
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 310 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 367
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 368 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 423
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 424 -KMQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 480
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 481 DEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTP 540
Query: 522 PASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
R+ + F + + +LS +AGG+G+ L +A VI + W P +QA DRAH
Sbjct: 541 HEEREEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 600
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
RIGQ V V+ L+ ++TV++ + + KL G+++D N +
Sbjct: 601 RIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKM 651
>gi|373486576|ref|ZP_09577249.1| SNF2-related protein [Holophaga foetida DSM 6591]
gi|372011437|gb|EHP12032.1| SNF2-related protein [Holophaga foetida DSM 6591]
Length = 852
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 218/465 (46%), Gaps = 36/465 (7%)
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFR---DVWPVLILTPSS 226
+ + L P+Q GVR + G R LL+D+MGLGKT+QAIA R + +L++TP+S
Sbjct: 220 LRTPLFPYQETGVRHLVAQG-RALLSDDMGLGKTVQAIAACEVLRRRGEARTILVVTPAS 278
Query: 227 LRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVV 286
L+ WA I+++ + VV+ G G T ++ D + I++Y++
Sbjct: 279 LKDQWAREIERYAG---ARAVVL-----GKGMEGRTAALNS-------DAPYKILNYELT 323
Query: 287 LKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELF 346
+ + L + ++I DE+ KN + RTA TL I +++ +L+GTP +R +L+
Sbjct: 324 HRELSRLKELDADVLILDEAQRAKNFRT-RTATTLRAIP-SRFLFVLTGTPVENRLDDLY 381
Query: 347 KQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQL 406
L+ P+V + + + G G N L + + A+V++RR K++VL QL
Sbjct: 382 ALLQLADPEVMGPLWRFNFDFHIQNPKGRVTGCRNLSRLRDRV-ASVVLRRRKEEVLDQL 440
Query: 407 PVKRRQQVFLDVAEKDMRQIYALFRE-----LEVVKGKIKACKSEEEVQSLKFTEKNLIN 461
P Q + +++ K+ R++ R L + + + ++++Q + N
Sbjct: 441 PAITEQTRYTELS-KEQRELEDSHRSSAAQLLAIAERRALTPAQQKQLQGALLKARQACN 499
Query: 462 KIYTDSAEAKIPAV--LDYLETVI-----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
+ K A LD E ++ E K L+F+ ML ++ +
Sbjct: 500 ALELCDPTRKKQASPKLDEFEALVAEIASEGSVKILVFSEWVEMLKLAATRLERQGIGWS 559
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
+ G P R AL+ F+E ++ +L AGG GL L AS VI +L W P L Q
Sbjct: 560 MLTGAVPTEKRPALLDRFREDPTIQV-LLCSDAGGSGLNLQVASYVIHLDLPWNPARLDQ 618
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
RAHR+GQ V+V YL A + ++ + + K G LD
Sbjct: 619 RNGRAHRLGQTRGVSVTYLCAREGIERGIEGTLEGKRAVRGAALD 663
>gi|441517428|ref|ZP_20999164.1| putative helicase [Gordonia hirsuta DSM 44140 = NBRC 16056]
gi|441455709|dbj|GAC57125.1| putative helicase [Gordonia hirsuta DSM 44140 = NBRC 16056]
Length = 1115
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 146/537 (27%), Positives = 250/537 (46%), Gaps = 52/537 (9%)
Query: 120 PFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQR 179
P + E++LS + + ++ + H VQR A+ P Q P +++ L +QR
Sbjct: 600 PNATMWEELLS-LGVVDSQLADWHGRVQRLAAARPPEPV------QTPPQLQAALRGYQR 652
Query: 180 DGV---RFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWP---VLILTPSSLRLHWAA 233
DG+ F +G +LAD+MGLGKT+Q +A+ T P L++ P+S+ +WAA
Sbjct: 653 DGLAWLSFLWDNGLGGILADDMGLGKTVQTLALVTRIAAQNPQVRFLVVAPTSVIGNWAA 712
Query: 234 MIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNIL 293
++ P ++ V S R+G + NI I SY ++ +
Sbjct: 713 ETARF--APSLQVATVTST---EKRAGVPLAEQIGTANI------VITSYTLLRIDYDAF 761
Query: 294 MSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALY 353
++ + DE+ FLKN +K A + A + L ++GTP + +EL+ + +
Sbjct: 762 ARVDWDGAVFDEAQFLKNRNSKTHQAARRL--AAPFKLAITGTPMENNVMELWALVSIVS 819
Query: 354 PDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK--ATVMIRRLKKDVLAQLPVKRR 411
P +Y++ ++ + + + E L L + +M+RR K V LP K+
Sbjct: 820 PGLYRDPRKFREHFA-----APIESGAEPERLDILRRRLKPIMLRRTKTQVADDLPPKQE 874
Query: 412 QQVFLDVAEKDMRQIYALF--RELEVVKGKIKACKSEEEVQSLKFTEK--------NLIN 461
V +D+ K R+IY +F RE + + G + + E +Q L+ + L++
Sbjct: 875 SVVHIDLDTK-HRKIYDVFLARERQKLLGLLDNWE-ENRIQILQALTRMRQLSLHPGLVD 932
Query: 462 KIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
+ + + KI + +L +I G L+F+ L I K+ +DG P
Sbjct: 933 QEHQSLSSTKIDYLAQHLPQLIAEGHSALVFSSFTGFLQLIADALTGLKIPFSYLDGSMP 992
Query: 522 PASRQALVTEFQE--KDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRA 579
A RQA + F ++ K ++S+KAGG GL LTAA A+ W P QA DRA
Sbjct: 993 AAQRQAQIDRFTSGGQNGTKIFLISLKAGGFGLNLTAADYCFVADPWWNPAAEAQAVDRA 1052
Query: 580 HRIGQVSSVNVYYLLANDTVDDIV---WDVVRSKLENLGQVLDGHENSLEVSSSQIR 633
HRIGQ V VY L++ T+++ V D R+ + L + DG + S ++++ +R
Sbjct: 1053 HRIGQERPVTVYRLVSTGTIEEKVVALQDRKRALFDAL--IDDGEQFSGKLTADDVR 1107
>gi|339482074|ref|YP_004693860.1| SNF2-like protein [Nitrosomonas sp. Is79A3]
gi|338804219|gb|AEJ00461.1| SNF2-related protein [Nitrosomonas sp. Is79A3]
Length = 1403
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 240/486 (49%), Gaps = 44/486 (9%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
++P+ ++++L +QR G + + G LAD+MGLGKT+QA+AV P L+
Sbjct: 936 KLPSTLQAELRDYQRAGFEWLFRLSAWGVGACLADDMGLGKTLQALAVILSRAGEGPTLV 995
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
+ P+S+ ++W + IQ+ P+ V +L GGS+R + P+D L I
Sbjct: 996 VAPTSVCMNWQSEIQR---FAPTLNVQIL---GGSDRQALI------EGLRPMDLL--IC 1041
Query: 282 SYDVVLK--LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
SY ++ + IL ++ ++ DE+ +KN KR+ + + + ++ ++ +GTP
Sbjct: 1042 SYALLQQESAGKILAVPTWQTIVLDEAQLIKNPATKRSQQAMAL--QGRFKIITTGTPVE 1099
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLK 399
+ EL+ + P + ++ + R+ G Q + L +++ ++ RR+K
Sbjct: 1100 NHLGELWNLFRFINPGLLGSLESFNRRFA--GPIERNQDREARQRLKRMIQPFIL-RRIK 1156
Query: 400 KDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNL 459
VL +LP + ++ ++++E++ AL R+L ++ + EE + K
Sbjct: 1157 TQVLDELPPRTDIELQVELSEQEAVFYEALRRKL---LNELNETQGPEENKRFKVLAA-- 1211
Query: 460 INKIYTDS------------AEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFL 507
I K+ + +K+ + L +++ K L+F+ L I
Sbjct: 1212 ITKLRRACCNVQLVAPDLGLSSSKLALFGEVLHELLDNRHKTLVFSQFVDHLSLIRSYLD 1271
Query: 508 KKKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAAVLSMKAGGVGLTLTAASTVIFAELS 566
+K + +DG TPPA R+ V FQ + DV ++S+KAGGVGL LTAA VI +
Sbjct: 1272 EKGIAYQYLDGQTPPAERKKRVDAFQAGQGDV--FLISLKAGGVGLNLTAADYVIHMDPW 1329
Query: 567 WTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
W P QA DRAHRIGQ V VY L+ +T+++ + + R K + VL+G E S +
Sbjct: 1330 WNPAVEDQASDRAHRIGQQRPVTVYRLVTKNTIEEQIVSLHRHKRDLADSVLEGGEISGK 1389
Query: 627 VSSSQI 632
+++ ++
Sbjct: 1390 INAQEL 1395
>gi|111018652|ref|YP_701624.1| helicase [Rhodococcus jostii RHA1]
gi|110818182|gb|ABG93466.1| probable helicase [Rhodococcus jostii RHA1]
Length = 1070
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 221/480 (46%), Gaps = 54/480 (11%)
Query: 165 QIPAHIESKLLPFQRDGVR---FALQHGGRILLADEMGLGKTIQAIAVATCFRD----VW 217
+ P+ ++++L P+Q +G R F +HG +LAD+MGLGKT+QA+A+ R
Sbjct: 601 EAPSTLDAQLRPYQLEGFRWLAFLWEHGLGGILADDMGLGKTLQALALICHARQSNPAAP 660
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
P LI+ P+S+ +W + + P VV +S + ++R +P D L
Sbjct: 661 PFLIIAPTSVVSNWES---ESARFAPDATVVAISD-------------TRSRRRVPFDEL 704
Query: 278 FN-----IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
+ SY + S + +I DE+ F KN Q+K + + + L
Sbjct: 705 VEGADIVVTSYTLFRLEFEAYAESAWSGMILDEAQFTKNHQSKIYQCVRRL--ETPFKLA 762
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
++GTP + +EL+ L P ++ N + + Y K + + E L L +
Sbjct: 763 ITGTPMENNLMELWSLLSITAPGLFPNPARFTDYYRKP-----IEKQGDTELLAQLRRRV 817
Query: 393 --VMIRRLKKDVLAQLPVK-----------RRQQVFLDVAEKDMRQIYALFRELEVVKGK 439
+M+RR K+ V+ LP K R ++V+ +++ ++I L +++ K +
Sbjct: 818 KPLMLRRTKEQVVKDLPAKQEQVLDVELHPRHRKVYDTHLQRERQKILGLLADVD--KNR 875
Query: 440 IKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
+S ++ L + L++ Y D AK+ A+L+ L V+ G + L+F+ L
Sbjct: 876 FTILQSLTLLRQLSL-DAGLVDAEYHDVPSAKVDALLEQLADVVAGGHRALVFSQFTGFL 934
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
I + +DG T R ++ EF+E ++S+KAGG GL LT A
Sbjct: 935 GKIRDRLADAGIAHSYLDGST--RRRGDVLREFKEGA-APVFLISLKAGGFGLNLTEADY 991
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
+ W P QA DRAHRIGQ +V VY L+A DT++D V + K V+D
Sbjct: 992 CFILDPWWNPATEAQAVDRAHRIGQTRNVMVYRLIAKDTIEDKVMALKAKKSALFASVMD 1051
>gi|408391352|gb|EKJ70731.1| hypothetical protein FPSE_09101 [Fusarium pseudograminearum CS3096]
Length = 1892
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 243/549 (44%), Gaps = 118/549 (21%)
Query: 165 QIPAHIESKLLPFQRDGVR---FALQHGGRILLADEMGLGKTIQAIAVA----------- 210
QIP I+++L +Q++GV F ++ +L D+MGLGKT+Q + +
Sbjct: 1294 QIPVAIKAELRSYQQEGVNWLNFLNKYHLHGILCDDMGLGKTLQTLCIVASDHHQRAEEF 1353
Query: 211 --TCFRDV--WPVLILTPSSLRLHWAAMIQQW---LNI-----PPSEIVVVLSQLGGSNR 258
T DV P LI+ P +L HW I+ + L++ PP+E + +LG ++
Sbjct: 1354 AKTQAPDVRRMPSLIVCPPTLSGHWQQEIKTYAPFLSVTAYVGPPAERKALKDRLGETD- 1412
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
+ SYDV IL ++ V+ DE H +KN +AK T
Sbjct: 1413 -------------------VVVTSYDVCRNDSEILGKHSWNYVVLDEGHLIKNPKAKITQ 1453
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG 378
A + + + L+L+GTP + +EL+ + L P + +R+ K +
Sbjct: 1454 AVKRL--ASNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRFSK 1511
Query: 379 ASNHEE------LHNLMKATV--MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF 430
AS+ E+ + L K + ++RRLK++VL LP K Q + D++ D++Q LF
Sbjct: 1512 ASSKEQEAGALAIEALHKQVLPFLLRRLKEEVLNDLPPKILQNYYCDLS--DLQQ--KLF 1567
Query: 431 RELEVVKGK-IKACKSEEE-------VQSLKFTEKNLINK----------IYTDSAE--- 469
+ +GK I+A E+ Q+L++ K L N +Y D+ +
Sbjct: 1568 EDFTRKQGKKIQAEAGREDKEAKQHIFQALQYMRK-LCNSPAMVMKPGSSLYDDTQKILA 1626
Query: 470 ------------AKIPAVLDYLETVIEAGC------------------KFLIFAHHQPML 499
K+ A+ D L ++ G + LIF + ML
Sbjct: 1627 KQGTSIEDAQHAPKLTALRDLL---VDCGIGVEGNDSNDPLYQPIKPHRALIFCQMKEML 1683
Query: 500 DAIHQLFLKK---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTA 556
D + LK+ V +R+DG RQ +V +F +L+ GG+GL LT
Sbjct: 1684 DMVQNKVLKELLPSVSHLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLTG 1743
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A TVIF E W P +QA DRAHRIGQ VNVY L+ T+++ + ++ R K++
Sbjct: 1744 ADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAST 1803
Query: 617 VLDGHENSL 625
V++ L
Sbjct: 1804 VVNQQNAGL 1812
>gi|419783541|ref|ZP_14309327.1| bacterial SNF2 helicase associated [Streptococcus oralis SK610]
gi|383182212|gb|EIC74772.1| bacterial SNF2 helicase associated [Streptococcus oralis SK610]
Length = 1031
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 228/481 (47%), Gaps = 54/481 (11%)
Query: 170 IESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FRDVWPVLILT 223
+++ L +Q GVR+ L H GG +LAD+MGLGKT+Q IA +T + VLIL
Sbjct: 578 VQASLRDYQEKGVRWLQMLHHYGFGG--ILADDMGLGKTLQTIAFSTSQVTEDSRVLILA 635
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
PS L +WA +++ P ++ VV +NR I+S N + + SY
Sbjct: 636 PSGLIYNWADEFRKF--APQLDLAVVHGL--KANREA--ILSENHQ--------IYVTSY 681
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
+ + F + DE+ +KNAQ K + + A +AL SGTP +
Sbjct: 682 ATFRQDSELYQEMAFDFLFLDEAQVMKNAQTKIAQSLRQFVVPAVFAL--SGTPIENHLG 739
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVL 403
EL+ + + P + + E+ E + +K VM RR K++VL
Sbjct: 740 ELWSIFQIVLPGLLPSKKEFMKLPA--------------ERVAQFIKPFVM-RRKKEEVL 784
Query: 404 AQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE------EVQSLKFTEK 457
+LP + V+ + E + IY +L+ ++ ++ +E E+ S +
Sbjct: 785 TELP-DLIEVVYKNELEDQQKAIY--LAQLQQMRDRLAQVTDQEFQRSRVEILSGLMRLR 841
Query: 458 NLINK--IYTD---SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
+ + ++ D A K+ ++ D L V + G + LIF+ + ML+ I Q +
Sbjct: 842 QICDTPALFMDDYQGASGKLDSLRDLLLQVADGGHRVLIFSQFKGMLEKIEQELPDLGLT 901
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
+I G TP RQ + F + + A ++S+KAGGVGL LT A TVI +L W P
Sbjct: 902 SFKITGSTPAQDRQEMTKAFNQGER-DAFLISLKAGGVGLNLTGADTVILVDLWWNPAVE 960
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
QA RAHR+GQ V VY L+ T+++ + ++ K + QVLDG E+ +S ++I
Sbjct: 961 AQAIGRAHRMGQEQMVEVYRLITKGTIEEKIQELQEQKKHLVSQVLDGTESRASLSLAEI 1020
Query: 633 R 633
R
Sbjct: 1021 R 1021
>gi|348526369|ref|XP_003450692.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like
[Oreochromis niloticus]
Length = 1972
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 226/497 (45%), Gaps = 62/497 (12%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQ-AIAVATCFR 214
K+D+ P +++S L P+Q +G+ RF+ +LADEMGLGKT+Q A+ + + ++
Sbjct: 732 KFDRQPDYLDSTGGTLHPYQLEGLNWLRFSWAQATDTILADEMGLGKTVQTAVFLYSLYK 791
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQW---------LNIPPSEIVVVLSQL---GGSNRS 259
+ P L+ P S ++W + W + S V+ ++ G + R
Sbjct: 792 EGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYIGDKDSRAVIRENEFSFEGNAIRG 851
Query: 260 GFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK--RT 317
G +S K++ P+ + SY+++ Q +L S + ++ DE+H LKN Q+K R
Sbjct: 852 GKK--ASKMKKDSPVKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRV 909
Query: 318 AATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQ 377
P+ Q+ LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 910 LNNYPL----QHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FADIA 959
Query: 378 GASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---RELE 434
++LH+++ M+RRLK DV +P K ++ + V M++ Y F R E
Sbjct: 960 KEDQIKKLHDML-GPHMLRRLKADVFKHMPSK--TELIVRVELSSMQKKYYKFILTRNFE 1016
Query: 435 ---------------VVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYL 479
VV K C + L N +Y ++ K L L
Sbjct: 1017 ALNTRGGGNQVSLLNVVMDLKKCCNHPYLFPAAANEAPKLPNGMYEGTSLTKASGKLMLL 1076
Query: 480 ETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEK 535
+ ++ E G + L+F+ MLD + + RIDGG RQ + F
Sbjct: 1077 QKMMRRLKEGGHRVLVFSQMTKMLDLLEDFLENEGYKYERIDGGVTGNLRQEAIDRFNAP 1136
Query: 536 DDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLL 594
+ A +LS +AGG+G+ L +A TVI + W P + IQA RAHRIGQ V +Y +
Sbjct: 1137 GAQQFAFLLSTRAGGLGINLASADTVIIYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFV 1196
Query: 595 ANDTVDDIVWDVVRSKL 611
+V++ + V + K+
Sbjct: 1197 TKASVEERITQVAKKKM 1213
>gi|407927052|gb|EKG19957.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 1254
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 226/495 (45%), Gaps = 64/495 (12%)
Query: 165 QIPAHIESKLLPFQRDGVR-----FALQHGGRILLADEMGLGKTIQAIAVATCF----RD 215
++P I L +Q+ GV+ ++ Q GG ++ DEMGLGKT+QAI+ +
Sbjct: 428 KVPGDIYPNLFDYQKTGVQWLWELYSQQVGG--IIGDEMGLGKTVQAISFVAGLHYSGKL 485
Query: 216 VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG-------------------S 256
PV+++ P+++ W W P + ++ S G +
Sbjct: 486 TKPVIVVCPATVMKQWVTEFHTWW--PALRVSILHSSGSGMMDVKRESQIERDIESRTFN 543
Query: 257 NRSGFTIVSSNTKR---NIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQ 313
NR + K+ + DG + +Y + L+ + ++ I DE H ++N
Sbjct: 544 NRKRLSKSERAAKKIVDRVRTDGHVLVTTYSGLASYGEFLIPTEWEYAILDEGHKIRNPD 603
Query: 314 AKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVF 373
++ T + + L+LSGTP + +EL+ + +YP + E+ N++ F
Sbjct: 604 SRVTIYCKEL--RTANRLILSGTPMQNNLVELWSLFDFIYPMRLGTLPEFRNQFENPIRF 661
Query: 374 GIYQGASNHE-----ELHNLMKATV---MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQ 425
G Y ASN + + ++K T+ +++R K DV A LP K + +F + RQ
Sbjct: 662 GGYANASNLQVETAMQCAEILKETISPYLLQRFKVDVAADLPKKTERVLFCRLTVT-QRQ 720
Query: 426 IYALFREL----EVVKGKIKA----------CKSEEEVQSLKFTEKNLINKIYTDSAEAK 471
Y F + +++GK +A C + + K+ K + S K
Sbjct: 721 AYEDFLKSPEMNSILEGKRQALFGIDILRKVCNHPDLIHHKSARHKS-DPKYGSGSKSGK 779
Query: 472 IPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKK--KVHCIRIDGGTPPASRQALV 529
+ V + ++ + G K L+FA H+ MLD I + F+KK ++ +R+DG T RQ LV
Sbjct: 780 MQVVKELVQMWKKKGHKTLLFAQHRIMLD-ILERFVKKAADINYLRMDGSTNIKDRQDLV 838
Query: 530 TEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVN 589
F ++ +L+ K GG+G+ LT A VI + W P +QA +RA R+GQ V
Sbjct: 839 DRFNNDSNMHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKREVE 898
Query: 590 VYYLLANDTVDDIVW 604
+Y L+ T+++ ++
Sbjct: 899 IYRLMTAGTIEEKIY 913
>gi|417916387|ref|ZP_12559969.1| SNF2 family N-terminal domain protein, partial [Streptococcus mitis
bv. 2 str. SK95]
gi|342829829|gb|EGU64171.1| SNF2 family N-terminal domain protein [Streptococcus mitis bv. 2
str. SK95]
Length = 737
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 137/480 (28%), Positives = 225/480 (46%), Gaps = 50/480 (10%)
Query: 169 HIESKLLPFQRDGVRFA---LQHGGRILLADEMGLGKTIQAIAVATC-FRDVWPVLILTP 224
+++ L +Q GVR+ +G +LAD+MGLGKT+Q IA T + VLIL P
Sbjct: 283 RVQASLRDYQEKGVRWLQMLYHYGFGGILADDMGLGKTLQTIAFLTSQVTEGSRVLILAP 342
Query: 225 SSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
S L +WA +++ P ++ +V +NR I+S N + + SY
Sbjct: 343 SGLIYNWADEFRKF--APQLDLAIVHGL--KANREA--ILSENHQ--------IYVTSYA 388
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
+ + +F + DE+ +KNAQ K + + A +AL SGTP + E
Sbjct: 389 TFRQDSELYQEMDFDFLFLDEAQVMKNAQTKIAQSLRQFVVPAVFAL--SGTPIENHLGE 446
Query: 345 LFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLA 404
L+ + + P + N E+ + + +K VM RR K++VL
Sbjct: 447 LWSIFQIVLPGLLPNKKEFMKLPA--------------DRVAQFIKPFVM-RRKKEEVLT 491
Query: 405 QLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE------EVQSLKFTEKN 458
+LP + V+ + E + IY +L+ ++ ++ +E E+ S +
Sbjct: 492 ELP-DLIEVVYKNELEDQQKAIY--LAQLQQMRDRLAQVTDQEFQRSRVEILSGLMRLRQ 548
Query: 459 LINK--IYTD---SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHC 513
+ + ++ D A K+ ++ D L V G + LIF+ + ML+ I Q +
Sbjct: 549 ICDTPALFMDDYQGASGKLDSLRDLLLQVAAGGHRVLIFSQFKGMLEKIEQELPDLGLTS 608
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
+I G TP RQ + F + + A ++S+KAGGVGL LT A TVI +L W P
Sbjct: 609 FKITGSTPAQDRQEMTKAFNQGER-DAFLISLKAGGVGLNLTGADTVILVDLWWNPAVEA 667
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIR 633
QA RAHR+GQ V VY L+ T+++ + ++ K + QVLDG E+ +S ++IR
Sbjct: 668 QAIGRAHRMGQEQMVEVYRLITKGTIEEKIQELQEQKKHLVSQVLDGTESRASLSLAEIR 727
>gi|449541690|gb|EMD32673.1| hypothetical protein CERSUDRAFT_118698 [Ceriporiopsis subvermispora
B]
Length = 1101
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 227/478 (47%), Gaps = 42/478 (8%)
Query: 163 YDQIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATC---FRDV 216
+++ P+ I + P+Q G+ + +L H G +LADEMGLGKT+Q I+ + +R++
Sbjct: 189 FEESPSFINGTMRPYQLQGLNWMVSLHHNGLNGILADEMGLGKTLQTISFLSYLKHYRNI 248
Query: 217 -WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P LI+ P S +W+ ++W S+ VL L GS I+++ R I D
Sbjct: 249 PGPHLIVVPKSTLQNWSREFEKWT----SDSNTVL--LTGSREERAEIIAN---RLISQD 299
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
I SY++ L ++ L +F+ ++ DE+H +KN + + + + LL++G
Sbjct: 300 FDVLITSYEICLIEKSALKKFSFEYIVIDEAHRIKNVDSILSQIVRSFTSRGR--LLITG 357
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNH---EELHNLMKAT 392
TP + ELF L + P+++ + + + K G + E LH +++
Sbjct: 358 TPLQNSLKELFALLNFICPEIFSDYADLDSFLHKDEAEGEADDEKSKKVVEALHKILRP- 416
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKIKACKSEEEVQ 450
++RR+K DV L K+ +++ +AE R+ Y L ++++ V G + + +
Sbjct: 417 FLLRRVKSDVEKNLLPKKEINIYVGLAEM-QRKWYRSVLEKDIDAVNGLTGKKEGKTRLM 475
Query: 451 SLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAH 494
++ + + Y D AE P D L+++ G + LIF+
Sbjct: 476 NMVMQLRKVTCHPYLFDGAEPGPPYTTDEHLVENSGKMVILDKLLQSMKAKGSRVLIFSQ 535
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLT 553
MLD + L + RIDGGT R + E+ + D K +L+ +AGG+G+
Sbjct: 536 MSRMLDILEDYCLFRGYKYCRIDGGTAHDDRIVAIDEYNKPDSDKFIFLLTTRAGGLGIN 595
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
LT A V+ + W P +QA DRAHRIGQ V V+ + +V++ + + KL
Sbjct: 596 LTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITEGSVEERMLERAAQKL 653
>gi|335306514|ref|XP_003360490.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Sus scrofa]
Length = 1045
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 227/469 (48%), Gaps = 49/469 (10%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 202 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 258
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 259 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 311
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 312 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 369
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 370 DFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 424
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 425 MQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 482
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 483 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 542
Query: 524 SRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
R+ + F + + +LS +AGG+G+ L +A VI + W P +QA DRAHRI
Sbjct: 543 EREEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 602
Query: 583 GQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
GQ V V+ L+ ++TV++ + + KL G+++D N +
Sbjct: 603 GQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKM 651
>gi|383456088|ref|YP_005370077.1| SNF2/helicase domain-containing protein [Corallococcus coralloides
DSM 2259]
gi|380735185|gb|AFE11187.1| SNF2/helicase domain-containing protein [Corallococcus coralloides
DSM 2259]
Length = 1188
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 142/504 (28%), Positives = 246/504 (48%), Gaps = 46/504 (9%)
Query: 145 LVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMG 199
LV+R A+ P ++PA ++++L +Q +G R+ + GG +LAD+MG
Sbjct: 694 LVERIFAAKELKP-------RVPATLKTELRDYQLEGFRWLTRLASWNAGG--VLADDMG 744
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRS 259
LGKT+QA+AV P L+L P+S+ +W +++ PS V + S +R
Sbjct: 745 LGKTVQALAVLLERAKHGPALVLAPTSVAFNWRDEAKRFA---PSLKVTLFSD--SEDRG 799
Query: 260 GFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
G +R P D L +ISY ++++ L + F ++ DE+ LKNA +R A
Sbjct: 800 G------TLERLGPRDVL--VISYGLLVRDIERLAARRFSTIVFDEAQALKNASTQRFRA 851
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
+ + + LSGTP + EL+ ++P + ++ + +R+ + A
Sbjct: 852 ARAL--QGDFKFALSGTPMENHLGELWALFGIVFPGLLGSLEAFRSRFAMPIEKQVDPTA 909
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQV--FLDVAE----KDMRQIYALFREL 433
L +++ ++RR K V AQLP + V L E +D R A +L
Sbjct: 910 GP--ALARVLQ-PFLLRRTKAQVEAQLPPRTDVHVPVILSPPEWTLYEDAR--LAALSDL 964
Query: 434 EVVKGKIKACKSEEEVQSLKFTEKNLIN--KIYTDSAE---AKIPAVLDYLETVIEAGCK 488
E+ K K+K + EV + + L + ++Y +++ +K+ ++ ++ + E G +
Sbjct: 965 EIRKSKMKDQERRIEVLAALTRLRLLASHPRLYDKASKLESSKLERFMELIQELREEGHR 1024
Query: 489 FLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAG 548
L+F+ L + ++ + V +DG TP R V FQE D ++S+KAG
Sbjct: 1025 ALVFSQFTSHLALVREVLDAQGVAYEYLDGSTPAGERAERVRAFQE-GDAPLFLISLKAG 1083
Query: 549 GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVR 608
G GL LTAA++VI + W P QA DRAHRIGQ V VY L+A T+++ + +
Sbjct: 1084 GFGLNLTAATSVIHLDPWWNPAVEDQASDRAHRIGQQRPVTVYRLVARGTIEEQMLSLHE 1143
Query: 609 SKLENLGQVLDGHENSLEVSSSQI 632
K + VL+G + + +S+ ++
Sbjct: 1144 QKRALVAGVLEGKDAAARLSTQEL 1167
>gi|397731004|ref|ZP_10497756.1| helicase conserved C-terminal domain protein [Rhodococcus sp. JVH1]
gi|396933004|gb|EJJ00162.1| helicase conserved C-terminal domain protein [Rhodococcus sp. JVH1]
Length = 1070
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 221/480 (46%), Gaps = 54/480 (11%)
Query: 165 QIPAHIESKLLPFQRDGVR---FALQHGGRILLADEMGLGKTIQAIAVATCFRD----VW 217
+ P+ ++++L P+Q +G R F +HG +LAD+MGLGKT+QA+A+ R
Sbjct: 601 EAPSTLDAQLRPYQLEGFRWLAFLWEHGLGGILADDMGLGKTLQALALICHARQSNPAAP 660
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
P LI+ P+S+ +W + + P VV +S + ++R +P D L
Sbjct: 661 PFLIIAPTSVVSNWES---ESARFAPDATVVAISD-------------TRSRRRVPFDEL 704
Query: 278 FN-----IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
+ SY + S + +I DE+ F KN Q+K + + + L
Sbjct: 705 VEGADIVVTSYTLFRLEFEAYAESAWSGMILDEAQFTKNHQSKIYQCVRRL--ETPFKLA 762
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
++GTP + +EL+ L P ++ N + + Y K + + E L L +
Sbjct: 763 ITGTPMENNLMELWSLLSITAPGLFPNPARFTDYYRKP-----IEKQGDTELLAQLRRRV 817
Query: 393 --VMIRRLKKDVLAQLPVK-----------RRQQVFLDVAEKDMRQIYALFRELEVVKGK 439
+M+RR K+ V+ LP K R ++V+ +++ ++I L +++ K +
Sbjct: 818 KPLMLRRTKEQVVKDLPAKQEQVLDVELHPRHRKVYDTHLQRERQKILGLLADVD--KNR 875
Query: 440 IKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
+S ++ L + L++ Y D AK+ A+L+ L V+ G + L+F+ L
Sbjct: 876 FTILQSLTLLRQLSL-DAGLVDAEYHDVPSAKVDALLEQLADVVAGGHRALVFSQFTGFL 934
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
I + +DG T R ++ EF+E ++S+KAGG GL LT A
Sbjct: 935 GKIRDRLADAGIAHSYLDGST--RRRGDVLREFKEGA-APVFLISLKAGGFGLNLTEADY 991
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
+ W P QA DRAHRIGQ +V VY L+A DT++D V + K V+D
Sbjct: 992 CFILDPWWNPATEAQAVDRAHRIGQTRNVMVYRLIAKDTIEDKVMALKAKKSALFASVMD 1051
>gi|440716061|ref|ZP_20896580.1| helicase, SNF2/RAD54 family [Rhodopirellula baltica SWK14]
gi|436439007|gb|ELP32506.1| helicase, SNF2/RAD54 family [Rhodopirellula baltica SWK14]
Length = 1381
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 234/481 (48%), Gaps = 37/481 (7%)
Query: 165 QIPAHIESKLLPFQRDGVRFA--LQH-GGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
+ P + + L +Q DG ++ L H G LAD+MGLGKT+Q +AV P L+
Sbjct: 920 KFPKTLNADLRDYQVDGFKWMSRLAHLGAGACLADDMGLGKTLQCLAVLLNRGKSGPALV 979
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
+ P+S+ +W + I ++ PS ++ S+ ++R T++ S KR++ I
Sbjct: 980 VAPTSVAANWVSEIARF---APSLRPILFSE---ADRE--TVIESLGKRDLL------IC 1025
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSR 341
SY ++ L S ++ ++ DE+ +KNA KR+ A + + +A + ++L+GTP +
Sbjct: 1026 SYGLLANEAEKLQSRRWQTLVLDEAQAIKNADTKRSEAAMGL--EADFRVVLTGTPMENH 1083
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK---ATVMIRRL 398
EL+ + + P + + + R F I + ++ +K A ++RR
Sbjct: 1084 LGELWNLFQFINPGLLGSSESFQER------FAIPIERDHRRDVQRQLKQLIAPFILRRT 1137
Query: 399 KKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL-----EVVKGKIKACKSEEEVQSLK 453
K VL +LP + V +++ E + A+ R+ + + K E+ L+
Sbjct: 1138 KSQVLDELPPRTEITVPIELGEDEAAMYEAMRRKALQNLEDSDDDRPVHIKILAELMRLR 1197
Query: 454 --FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKV 511
+L++ A AK+ D + +IE G K L+F+ L + ++K+
Sbjct: 1198 RFCCHPDLVDPDAGLKA-AKLERFTDTVTDLIEGGHKVLVFSQFVGHLHLLRDRLDERKI 1256
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
+DG TP R+ V FQ+ + ++S+KAGGVGL LTAA VI + W P
Sbjct: 1257 SYQYLDGSTPAKKRKTSVDAFQDGEG-DVFLISLKAGGVGLNLTAADYVIHMDPWWNPAV 1315
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ 631
QA DRAHR+GQ V VY + T+++ + + SK + +L+G E+S ++S+ +
Sbjct: 1316 EDQASDRAHRMGQQRPVTVYRFITTGTIEERILQLHESKRDLADSLLEGTESSAKLSAEE 1375
Query: 632 I 632
+
Sbjct: 1376 L 1376
>gi|168180252|ref|ZP_02614916.1| helicase, Snf2 family [Clostridium botulinum NCTC 2916]
gi|182668714|gb|EDT80692.1| helicase, Snf2 family [Clostridium botulinum NCTC 2916]
Length = 1097
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 250/511 (48%), Gaps = 62/511 (12%)
Query: 153 ASAAPDLREKYDQIPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAI 207
+S ++ + Y ++P + + L +Q G R+ ++ GG +LADEMGLGKTIQ I
Sbjct: 626 SSRITNINDGYYEVPKKLNATLREYQIAGYRWMKILSNMKFGG--ILADEMGLGKTIQTI 683
Query: 208 AVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSN 267
+ + LI+TP+SL +W Q++ +EI+ ++G I S
Sbjct: 684 SFLLSEKGN-KSLIVTPTSLIYNWQDEFQKF-----AEIL----KIG-------VIHGSK 726
Query: 268 TKRNIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAAT 320
+R LDG YDV+L L + F I DE +KN A+ T +
Sbjct: 727 EERMKVLDGR---EKYDVLLTTYGTLKNDIQLYKDITFDYCIIDEGQNIKNPLAQSTDSV 783
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGAS 380
I K ++AL +GTP + +EL+ + + P + + ++ I + +
Sbjct: 784 KRINSKVRFAL--TGTPIENNLMELWSIFDFIMPGYLYSEERFQEKF-------IDKVEA 834
Query: 381 NHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKI 440
N +EL L++ ++ RR KKDVL LP K ++ +++ + +IY + ++ +K K+
Sbjct: 835 NIDELKTLIRPFIL-RREKKDVLKDLPHKIEKKFLVEMTT-NQEKIYKAY--MKSIKEKL 890
Query: 441 KACKSEEEVQSLKFTEK--------NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIF 492
K K E+++ + + +LI Y +K+ ++ ++ ++ G K L+F
Sbjct: 891 KNNK-EDKITIFSYLTRLRQLCLDPSLIIDEYK-GGSSKLRIAMELVQEGVDEGKKILLF 948
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGL 552
+ +L I +L K+ + +DG T + R LV EF + VK ++S+KAGG GL
Sbjct: 949 SQFISVLKNISKLLEKEGIEYFYLDGSTNASERIKLVNEFNKNSHVKVFLISLKAGGTGL 1008
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
LT+A+ VI + W P QA DRAHRIGQ + V V L+ T+++ + + K E
Sbjct: 1009 NLTSANLVIHFDPWWNPAIEDQATDRAHRIGQKNLVQVIKLVCKGTIEEKIIMLQEDKKE 1068
Query: 613 NLGQVLDGHENSLEVSSSQIRSSPAKQKTLD 643
+ V++ ++ ++ + ++ +K++ LD
Sbjct: 1069 LINNVMNS-----DLKNAHLINTLSKEEILD 1094
>gi|405976812|gb|EKC41296.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Crassostrea gigas]
Length = 1371
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 247/500 (49%), Gaps = 57/500 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDV- 216
++++ P++I++ ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +
Sbjct: 484 RFEESPSYIKAGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYK 543
Query: 217 ---WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-RSGFTIVSSNTKRNI 272
P L++ P S +W A ++W PS V L +G + R+ F R++
Sbjct: 544 HIPSPHLVICPKSTLANWQAEFKRWC---PSIRAVCL--IGNQDQRTAFI-------RDV 591
Query: 273 PLDGLFN--IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
+ G ++ I SY++ ++ +++ N++ ++ DE+H +KN ++K + K+
Sbjct: 592 MMPGDWDVCITSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF--KSTNR 649
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
LLL+GTP + EL+ L L PDV+ + ++ + + G + E LH +++
Sbjct: 650 LLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFNTNNCIG---DTALVERLHEVLR 706
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
++RRLK DV L K+ ++F+ ++ K R+ Y L ++++VV G K+ K
Sbjct: 707 P-FLLRRLKSDVEKALLPKKEIKIFVGLS-KMQREWYTKILMKDIDVVNGAGKSDKMR-- 762
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLIF 492
+ ++ + N Y D AE P A+LD L + + + LIF
Sbjct: 763 LLNILMQLRKCANHPYLFDGAEPGPPYTTDKHLFENSGKMAILDKLLPKLQDQDSRVLIF 822
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVG 551
+ MLD + + R+DG TP R + +F + K +LS ++GG+G
Sbjct: 823 SQMTRMLDILEDYCHWRGYDYCRLDGQTPHEDRTKYINDFNMPNSSKFIFMLSTRSGGLG 882
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK- 610
+ L A VI + W P +QA DRAHRIGQ V V+ + +TV++ + + K
Sbjct: 883 INLATADIVIIYDSDWNPQVDLQAMDRAHRIGQKKQVKVFRFITENTVEERIVEKAEMKL 942
Query: 611 -LENL----GQVLDGHENSL 625
L+N+ G+++D N L
Sbjct: 943 RLDNVVIQQGRLVDPSANKL 962
>gi|395335068|gb|EJF67444.1| SNF2 family DNA-dependent ATPase [Dichomitus squalens LYAD-421 SS1]
Length = 1027
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 226/478 (47%), Gaps = 42/478 (8%)
Query: 163 YDQIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATC---FRDV 216
+++ P++I + P+Q G+ + +L H G +LADEMGLGKT+Q I+ + +RD+
Sbjct: 117 FEESPSYIHGTMRPYQLQGLNWMVSLHHNGLNGILADEMGLGKTLQTISFLSYLRHYRDI 176
Query: 217 -WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P L++ P S +W+ W ++ VL L GS I+S R IP D
Sbjct: 177 SGPHLVVVPKSTLQNWSREFALWT----PDVSTVL--LTGSKDERAEIISM---RLIPQD 227
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
I SY+V L ++ L +F+ ++ DE+H +KN + + + + + LL++G
Sbjct: 228 FDVLITSYEVCLIEKSALKKFSFEYIVIDEAHRIKNVDSILSQIVRSFLSRGR--LLITG 285
Query: 336 TPALSRPIELFKQLEALYPDV---YKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
TP + ELF L + P++ Y ++ + ++ + E LH +++
Sbjct: 286 TPLQNNMKELFALLNFICPEIFSDYADLESFLHKDDADAEGDEEKSKKVVEALHKILRP- 344
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKIKACKSEEEVQ 450
++RR+K DV L K+ +++ + E R+ Y L ++++ V G + + +
Sbjct: 345 FLLRRVKSDVEKNLLPKKEINIYVGLTEM-QRKWYRSVLEKDIDAVNGLTGKKEGKTRLM 403
Query: 451 SLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAH 494
++ + + Y D AE P D L+ + G + LIF+
Sbjct: 404 NIVMQLRKVTCHPYLFDGAEPGPPYTTDEHLVENSGKMVILDKLLKNMKAKGSRVLIFSQ 463
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLT 553
MLD + L + RIDGGT R + E+ + D K +L+ +AGG+G+
Sbjct: 464 MSRMLDILEDYCLFRGYKYCRIDGGTAHDDRIVAIDEYNKPDSEKFIFLLTTRAGGLGIN 523
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
LT+A V+ + W P +QA DRAHRIGQ V V+ + +V++ + + KL
Sbjct: 524 LTSADVVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITEGSVEERMLERAAQKL 581
>gi|47217344|emb|CAG11049.1| unnamed protein product [Tetraodon nigroviridis]
Length = 985
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 240/499 (48%), Gaps = 55/499 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAV---ATCFR 214
++D P+++++ K+ +Q G+ + + ++G +LADEMGLGKT+Q IA+ +R
Sbjct: 99 RFDDSPSYVKTGKMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTIALLGYMKHYR 158
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
++ P ++L P S +W ++W+ PS V L +G + I R++
Sbjct: 159 NIPGPHMVLVPKSTLYNWMNEFKRWV---PSLRAVCL--IGDRDERTALI------RDVL 207
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
L G +++ SY++++ + + N++ ++ DE+H +KN ++K + K L
Sbjct: 208 LPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF--KTTNRL 265
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
LL+GTP + EL+ L L PDV+ + ++ + + G + E LH +++
Sbjct: 266 LLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLV---ERLHTVLRP 322
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RR+K DV L K+ ++++ ++ K R+ Y L ++++++ K K +
Sbjct: 323 -FLLRRIKADVEKTLLPKKEIKIYVGLS-KMQREWYTKILMKDIDILNSAGKMDKMR--L 378
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LETVIEAGCKFLIFA 493
++ + N Y D AE P D L + E G + LIF+
Sbjct: 379 LNILMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVVLDKLLPKLKEQGSRVLIFS 438
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
+LD + + + R+DG TP RQ + F E + K +LS +AGG+G+
Sbjct: 439 QMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSKFIFMLSTRAGGLGI 498
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA DRAHRIGQ V V+ + +TV++ + + KL
Sbjct: 499 NLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRYITENTVEERIVERAEMKLR 558
Query: 613 ------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 559 LDSIVIQQGRLVDPSANKL 577
>gi|156551567|ref|XP_001601734.1| PREDICTED: chromatin-remodeling complex ATPase chain Iswi [Nasonia
vitripennis]
Length = 879
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 235/473 (49%), Gaps = 57/473 (12%)
Query: 187 QHGGRILLADEMGLGKTIQAIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q I++ FR++ P +++ P + +W ++W
Sbjct: 18 ENGINGILADEMGLGKTLQTISLLGYMKHFRNINGPHIVVVPKTTLANWMNEFKKWC--- 74
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V L +G S+ R+ F R++ L G +++ SY++VL+ + + N++
Sbjct: 75 PSLRTVFL--IGDSDTRNAFI-------RDVMLPGEWDVCVTSYEMVLREKWVFKKFNWR 125
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYA--LLLSGTPALSRPIELFKQLEALYPDVY 357
++ DE+H LKN ++K + I+++ + A LLL+GTP + EL+ L L PDV+
Sbjct: 126 YMVVDEAHRLKNEKSKLSE----ILRECKTANRLLLTGTPLQNNLHELWSLLNFLLPDVF 181
Query: 358 KNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLD 417
+ ++ + + G + E LH +++ ++RRLK +V L K+ +V++
Sbjct: 182 NSSEDFDSWFNTNSFLG---DNTLIERLHAVLRP-FLLRRLKSEVEKALKPKKEIKVYIG 237
Query: 418 VAEKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPA 474
++ K R+ Y L +++++V G K K +Q++ + N Y D AE P
Sbjct: 238 LS-KMQREWYTKVLMKDIDIVNGAGKIEKMR--LQNILMQLRKCCNHPYLFDGAEPGPPY 294
Query: 475 VLD---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGG 519
D L + + + LIF+ MLD + + R+DG
Sbjct: 295 TTDEHLVYNCGKLVILDKLLPKLQQQQSRVLIFSQMTRMLDILEDYCHWRCYQYCRLDGN 354
Query: 520 TPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDR 578
T RQ + E+ K +LS +AGG+G+ L A VI + W P +QA DR
Sbjct: 355 TAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDR 414
Query: 579 AHRIGQVSSVNVYYLLANDTVDDIVWDV--VRSKLENL----GQVLDGHENSL 625
AHRIGQ V V+ + +TV++ + + V+ +L+ L G+++D +N+L
Sbjct: 415 AHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQQGRLIDAKQNAL 467
>gi|255307194|ref|ZP_05351365.1| putative helicase [Clostridium difficile ATCC 43255]
Length = 1059
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 235/501 (46%), Gaps = 61/501 (12%)
Query: 165 QIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPV 219
+IPA++ + L +Q +G+ + + GG +LADEMGLGKTIQ IA +
Sbjct: 599 EIPANLNANLRDYQINGLNWFKVLDYYKFGG--ILADEMGLGKTIQTIAFLLSLSNK-KS 655
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
LI+TP+SL +W +++ +I V+L +R + N
Sbjct: 656 LIVTPTSLIYNWKNEFEKF----APDIKVLLIHGNKRDREKCFMKLEN------------ 699
Query: 280 IISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
+DV+L L + F I DE+ +KN A T + I + ++AL
Sbjct: 700 ---FDVILTTYGTLRNDLDKYSEIKFDYCILDEAQNIKNPVALVTESVKSINAENKFAL- 755
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIY-QGASNHEELHNLMKA 391
+GTP + +EL+ + + P G Y K ++ N + L L+K
Sbjct: 756 -TGTPMENNLLELWSIFDFIMP---------GYLYSKAKFQELFINKEDNVKNLKKLIKP 805
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQS 451
++ RR KK V+ +LP K + F+++ K+ ++IY+++ + K K K K ++ V
Sbjct: 806 FIL-RRSKKQVMKELPDKIEKNFFVEL-NKEQKKIYSVYSKDIQDKMKDKNLKKDKIVIF 863
Query: 452 LKFT-------EKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
T + +++ K Y + +KI L+ L I K L+F+ +L I +
Sbjct: 864 SYLTKLRQLCLDPSIVVKDYNKKS-SKIETCLEILRDSINENHKILLFSQFTSVLKNISK 922
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
K K+ IDG T R LV EF D K ++S+KAGG GL LT+A VI +
Sbjct: 923 ELDKYKIKYHYIDGKTNAKERLELVDEFNNSMDKKVFLISLKAGGTGLNLTSADMVIHFD 982
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 624
W P QA DRAHR GQ +SV V L+A T+++ + + SK E + Q ++G
Sbjct: 983 PWWNPSVENQASDRAHRFGQKNSVQVIKLIAKGTIEEKIIKLQESKKELINQFING---- 1038
Query: 625 LEVSSSQIRSSPAKQKTLDSF 645
E+S+ + S + ++ ++ F
Sbjct: 1039 -ELSNEGVLKSLSDEEIINLF 1058
>gi|282880921|ref|ZP_06289612.1| SNF2 family N-terminal domain protein [Prevotella timonensis CRIS
5C-B1]
gi|281305144|gb|EFA97213.1| SNF2 family N-terminal domain protein [Prevotella timonensis CRIS
5C-B1]
Length = 1254
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 242/474 (51%), Gaps = 35/474 (7%)
Query: 158 DLREKYDQIPAHIESKLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFR 214
D + + Q+P + ++L +Q G + + G LAD+MGLGKT+Q I +
Sbjct: 786 DAEKLHPQVPKTLNAQLRNYQEVGFEWMSKLTAWGAGACLADDMGLGKTLQTITLLLEQA 845
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P LI+ P+SL +W + ++ P+ V VL+ NR RN L
Sbjct: 846 QSGPSLIVVPASLVPNWRKELSRF---APTLNVFVLND--EVNREQ---AIEQISRNEVL 897
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
+ +Y ++ Q L ++ +V+ DE+H +KN K + A + + KA+ ++L+
Sbjct: 898 -----VTTYALLTIHQQQLSQKSWNVVVLDEAHTIKNPNTKMSKAAMTL--KAERKVILT 950
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK--AT 392
GTP + EL+ + + P + N ++ +Y + I + N E L K +
Sbjct: 951 GTPIQNHLSELWNLFQFINPGLLGNAEQFKKKY----IIPIEEN-KNKERQGQLKKLISP 1005
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFR----ELEVVKGKIKACKSEEE 448
++RR K +V+ +LP K + +++++ ++ +Y L R EL + + +K + E
Sbjct: 1006 FLLRRTKGEVIEELPEKNDINLPVELSDNEL-AMYELHRKKAEELALAEEGVK-LSTLSE 1063
Query: 449 VQSLK--FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLF 506
+ L+ +L++K + ++ +K+ + E++ ++G + L+F+ L + Q+
Sbjct: 1064 ITKLRQMACSISLVDKTWKKTS-SKLSTFIALAESLNDSGGRALVFSQFTSFLAEVRQVM 1122
Query: 507 LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELS 566
K K+ + +DG TP R+ +V EFQ K + ++S+KAGG+GL LTAA+ VI +
Sbjct: 1123 DKIKLPYLYLDGATPIKKREEIVDEFQ-KGNYPFFLISLKAGGLGLNLTAANYVIHLDPW 1181
Query: 567 WTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
W P QA DRA+RIGQ + V VY+L+A T+++ + + ++K + +L+G
Sbjct: 1182 WNPAIEQQATDRAYRIGQRNDVTVYHLIAQHTIEEKIIRLHKTKRDLADSLLEG 1235
>gi|429746481|ref|ZP_19279830.1| protein, SNF2 family [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429166206|gb|EKY08209.1| protein, SNF2 family [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 950
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 138/500 (27%), Positives = 232/500 (46%), Gaps = 65/500 (13%)
Query: 158 DLREKYDQIPA-HIESKLLPFQRDGVRFALQH---GGRILLADEMGLGKTIQAIAVATCF 213
+L EK P+ ++++ L P+Q +GV + LQH G LAD+MGLGKT+Q IA+
Sbjct: 461 NLVEKVSYTPSPNLQATLRPYQIEGVEWLLQHYYNGVGACLADDMGLGKTLQTIALLVAI 520
Query: 214 RDVWP---------------------VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQ 252
D P VL++ PSSL +W +++ P +Q
Sbjct: 521 HDALPEKAIETADLFSGIEKSKEALKVLVILPSSLIFNWYDETKRF---APH---FKCTQ 574
Query: 253 LGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA 312
G++R KR D +F SY +V + + F+ +I DES +KN
Sbjct: 575 YVGTDRK------VKAKRLGNYDVVFT--SYPIVERDVELFQKYEFRYIILDESQRIKNK 626
Query: 313 QAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV 372
+K A + KA + + LSGTP + +L+ Q++ + P++ K+ Y + Y V
Sbjct: 627 NSKTFKAIHTL--KATHRIALSGTPIENSLSDLWSQMQFINPNILKS---YASFYKNYEV 681
Query: 373 -FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFR 431
+ EEL ++ + ++RR K+ VL LP Q ++ ++E + +
Sbjct: 682 EISKKKNTQALEELKTII-SPFLLRRTKEQVLDDLPEMEEQIIYCPMSEAQHK-----WY 735
Query: 432 ELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDS------------AEAKIPAVLDYL 479
E E K + + + E + +F N++ ++ S A K V++Y+
Sbjct: 736 ETEKSKVRNQLLQINEPIS--EFNTLNMLMRLRKISLHPKLVDKESKIASGKYEEVINYM 793
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
E ++++ K LIF+ L + KK++ ++ G TP R+ V FQ +
Sbjct: 794 EELLQSSRKALIFSSFVSHLALYEEWCNKKRIKYAKLTGETPSFERKNQVEMFQNNPSIS 853
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+S+KAG VGL LT AS V+ + W P QA RAHRIGQ + VNV ++ DT+
Sbjct: 854 FFFISLKAGEVGLNLTQASYVLLLDPWWNPFSEKQAIGRAHRIGQQNKVNVIRFVSKDTI 913
Query: 600 DDIVWDVVRSKLENLGQVLD 619
++ + + +SK E ++D
Sbjct: 914 EEKIIKLQKSKTELSENIID 933
>gi|240145145|ref|ZP_04743746.1| superfamily II DNA/RNA helicase, SNF2 family [Roseburia intestinalis
L1-82]
gi|257202823|gb|EEV01108.1| superfamily II DNA/RNA helicase, SNF2 family [Roseburia intestinalis
L1-82]
gi|291537657|emb|CBL10769.1| Superfamily II DNA/RNA helicases, SNF2 family [Roseburia intestinalis
M50/1]
gi|291537792|emb|CBL10903.1| Superfamily II DNA/RNA helicases, SNF2 family [Roseburia intestinalis
XB6B4]
Length = 1099
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 223/478 (46%), Gaps = 41/478 (8%)
Query: 165 QIPAHIESKLLPFQRDG---VRFALQHGGRILLADEMGLGKTIQAIAVATCF-------- 213
++P + S + +Q++G ++ ++G +LAD+MGLGKT+Q I++ T
Sbjct: 625 EVPEALNSIMRSYQKNGFLWLKTLRENGFGGILADDMGLGKTLQVISLLTAEQQEMQAGE 684
Query: 214 RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
+++ LI+ P+SL +W I ++ P + V+V GS +I+ +
Sbjct: 685 KELRRSLIVCPASLVYNWQKEITRF--APQLKTVIV----AGSVPDRASIIRHSK----- 733
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
+G I SYD++ + + F I + DE+ ++KN + I A + L L
Sbjct: 734 -EGEILITSYDLLKRDAEVYQKFVFAIQVIDEAQYIKNPSTQAAKGVKKIT--AAFKLAL 790
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV 393
+GTP +R EL+ + L P ++ R + Q A+ E L +++ +
Sbjct: 791 TGTPIENRLSELWSIFDYLMPGFLYTYQKF--REEIELPIAVNQDANKMERLQRMIRPFI 848
Query: 394 MIRRLKKDVLAQLPVKRRQQVF----------LDVAEKDMRQIYALFRELEVVKGKIKAC 443
+ RRLK DVL LP K + VF D M+++ + E E KG+++
Sbjct: 849 L-RRLKGDVLKDLPEKIEENVFARLDGEQMQLYDAYATRMKEMLSQQNEKEFHKGRMQIL 907
Query: 444 KSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
+++ L L+ + +SA K ++ + + AG K L+F+ MLD +
Sbjct: 908 SELTKLRQLCCDPGLLLEDYHGESA--KTDMCMELIVNAVGAGHKILLFSQFTSMLDRLT 965
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
+ K+ + + G R +V F DDV +S+KAGG GL LT+A VI
Sbjct: 966 ERLKKEGIDYYLLTGSVNKEKRMQMVESFN-NDDVPVFCISLKAGGTGLNLTSADIVIHY 1024
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGH 621
+ W QA DRAHRIGQ V VY L+A T+++ + D+ K + QVL+G
Sbjct: 1025 DPWWNVAVQNQATDRAHRIGQKHVVTVYKLVAEGTIEEKIIDIQERKKKLAEQVLEGE 1082
>gi|422304482|ref|ZP_16391826.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC 9806]
gi|389790352|emb|CCI13752.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC 9806]
Length = 1390
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 138/532 (25%), Positives = 249/532 (46%), Gaps = 43/532 (8%)
Query: 113 RLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIES 172
R F P LS + + ++ +NL QR S P ++P+ +++
Sbjct: 883 RFHPFAAPMLSELSEEVGQLKADKRWRDNL----QRFQESQDFTP-------EVPSTLQA 931
Query: 173 KLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+L +Q +G R+ + G LAD+MGLGKT+QA+AV P L + P+S+ L
Sbjct: 932 ELRDYQLEGFRWLARLARWGAGACLADDMGLGKTLQALAVILTRASEGPTLAIAPTSVCL 991
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK- 288
+W + +++ P I+ QLG +R R P D L + SY ++ +
Sbjct: 992 NWISEAERF--APTLNII----QLGTGDRQALL------DRLQPFDLL--VCSYGLLQQE 1037
Query: 289 -LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFK 347
+ +L ++ ++ DE+ +KN KR+ A + + + + L+ +GTP + EL+
Sbjct: 1038 EVATMLAGVEWRTIVLDEAQAIKNFSTKRSKAAMNL--RGDFKLITTGTPIENHLGELWN 1095
Query: 348 QLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLP 407
+ P + ++ + R+ Y + E+L L++ ++RR K VLA+LP
Sbjct: 1096 LFRFINPGLLGSLESFDRRFATP--IEKYGDKTAREQLKKLVRP-FLLRRTKNQVLAELP 1152
Query: 408 VKRRQQVFLDVAEKDMRQIYALFR----ELEVVKGKIKACKSEEEVQSLKFTEKNLINKI 463
+ V +++ ++ AL R +L A + V+ +K ++
Sbjct: 1153 PRTEILVPIELTVEEKAFYEALRRRALEKLSESDSTAGAKHLQVLVEIMKLRRACCHPQL 1212
Query: 464 YT---DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
D A +K+ + L+ +++ K L+F+ L + ++++ +DG T
Sbjct: 1213 VAPDLDLAGSKLSRFGEILDDLLDNQHKALVFSQFVDHLAIVRSYLEQRQIKYQYLDGST 1272
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P RQ V FQ + ++S+KAGG GL LTAA VI + W P QA DRAH
Sbjct: 1273 PAGDRQKQVKAFQAGEG-DVFLISLKAGGTGLNLTAADYVIHLDPWWNPAVEDQASDRAH 1331
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
RIGQ V +Y L+A DT+++ + D+ K + +L+G + S ++S+ ++
Sbjct: 1332 RIGQKRPVTIYRLVAKDTIEEKIVDLHHHKRDLADSLLEGTDASGKLSTDEL 1383
>gi|453363260|dbj|GAC80905.1| putative helicase [Gordonia malaquae NBRC 108250]
Length = 1116
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 237/488 (48%), Gaps = 42/488 (8%)
Query: 167 PAHIESKLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPV---L 220
P + ++L P+Q+DG+ F ++G +LAD+MGLGKT+Q +A+ D P L
Sbjct: 648 PVGLRAQLRPYQQDGLDWLSFLWENGLGGVLADDMGLGKTVQTLALMQHAVDSDPTARFL 707
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
++ P+S+ +WAA ++++ +P +++ V + RSG + N+ +
Sbjct: 708 VVAPTSVISNWAAEVRRF--VPDLDVMTVTAT---QKRSGSPLHDRVGNANV-------V 755
Query: 281 ISYDVVLKLQ-NILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
++ +L+L + + ++ + DE+ FLKN AK A + A + L ++GTP
Sbjct: 756 VTSYALLRLDVDAFSAMSWDGAVFDEAQFLKNHNAKTHHAARRL--DAPFKLAITGTPME 813
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT--VMIRR 397
+R +EL+ + + P +Y + + + + G + E+L L + +M+RR
Sbjct: 814 NRVMELWSLVSVVAPGLYPSPLLFKDHFA-----GPIESGQAPEKLDLLRRRIRPIMLRR 868
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKG--------KIKACKSEE 447
K VL LP K+ Q + L++ E R++Y L R + G +I+ ++
Sbjct: 869 TKSQVLTDLPEKQEQVLHLEL-EPAHRKVYDTHLARHRQETLGLLDDFDGNRIQILRALT 927
Query: 448 EVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFL 507
++ L L++ + AKI + + L +I+ G L+F+ L +
Sbjct: 928 RLRQLSL-HPGLVDDEHAAVKSAKIEYLAEQLPILIDEGHSALVFSSFTGFLALVAARLD 986
Query: 508 KKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSW 567
K + IDG TP R + +F + + ++S+KAGG GL LTAA A+ W
Sbjct: 987 KAGIAYSYIDGSTPVVKRADQIEQFTQGA-TQVFLISLKAGGFGLNLTAADYCFLADPWW 1045
Query: 568 TPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL-DGHENSLE 626
P QA DRAHRIGQ +V VY + + DT++D V ++ K E ++ DG S
Sbjct: 1046 NPAAEAQAVDRAHRIGQHRAVTVYRMASVDTIEDKVIELQNRKRELFNALIDDGEAFSGA 1105
Query: 627 VSSSQIRS 634
+++ +RS
Sbjct: 1106 ITADDVRS 1113
>gi|51244847|ref|YP_064731.1| helicase [Desulfotalea psychrophila LSv54]
gi|50875884|emb|CAG35724.1| probable helicase [Desulfotalea psychrophila LSv54]
Length = 1399
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 246/479 (51%), Gaps = 35/479 (7%)
Query: 166 IPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
+P ++++L +Q +G + L H G LAD+MGLGKT+Q++A+ + P L++
Sbjct: 936 LPTTLQAELRDYQLEGFSWLGRLAHWGVGGCLADDMGLGKTLQSLALILTLSENGPTLVV 995
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+S+ +W A ++++ P+ + VL+ G + + S+ I +
Sbjct: 996 APTSVANNWRAEVKKF---TPTLKLKVLAH--GDRKKTIEDLGSHD---------LLITT 1041
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
Y ++ + +L +++ V+ DE+ +KNA KR+ A + + KA++ L+ +GTP +
Sbjct: 1042 YTLLQQESELLSGVDWQTVVLDEAQAIKNAATKRSKAAMGL--KAKFKLITTGTPIENHL 1099
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDV 402
EL+ L + P + + + + YQ +L L++ ++ RR+K +V
Sbjct: 1100 GELWNLLHFVNPGLLGTLQSFNENFAIP--IERYQDREARTKLKKLIRPFIL-RRIKSEV 1156
Query: 403 LAQLPVKRRQQVFLDVAEKDMRQIYALFRE--LEVVKG----KIKACKSEEEVQSLKFTE 456
L +LP + + + ++E++ R Y R+ L++++G K + + E+ L+
Sbjct: 1157 LDELPPRTEITLEVQMSEEE-RHFYEALRQNALDILEGNKDRKGRHLQILTEIMKLRQAC 1215
Query: 457 KN--LINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
N LI+K T + +K+ D +E ++ K L+F+ L I + ++ +
Sbjct: 1216 CNPRLIDK-NTSISSSKMKVFGDVVEELLGGNHKALVFSQFIGHLHIIREYLDERGISYQ 1274
Query: 515 RIDGGTPPASRQALVTEFQE-KDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
+DG T R+ V +FQ K D+ ++S+KAGG+GL LTAA V+ + W P
Sbjct: 1275 YLDGSTSSKMREKGVNDFQAGKGDL--FLISLKAGGLGLNLTAADYVLHMDPWWNPAIED 1332
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
QA DRAHRIGQ V VY L++ +++++ + + + K + G +L+G + S ++SS +
Sbjct: 1333 QASDRAHRIGQTRPVTVYRLVSKNSIEEKIVKLHQEKRDLAGSLLEGTDISAKMSSDDL 1391
>gi|449137775|ref|ZP_21773085.1| helicase, Snf2 family protein [Rhodopirellula europaea 6C]
gi|448883533|gb|EMB14056.1| helicase, Snf2 family protein [Rhodopirellula europaea 6C]
Length = 914
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 144/495 (29%), Positives = 234/495 (47%), Gaps = 61/495 (12%)
Query: 131 EISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHI----------ESKLLPFQRD 180
E G++V+I +P + + +R + DQI A I ++LLP+Q D
Sbjct: 296 ETVGHDVKI---YPDAEAFLQRELMQKHIRHECDQIRASISDHPLRTKLLNAELLPYQLD 352
Query: 181 GVRFALQHGGRILLADEMGLGKTIQAIAVATCF---RDVWPVLILTPSSLRLHWAAMIQQ 237
G+ FA GR +LAD+MGLGKTIQ I VA D+ VL++ P+SL+ W I +
Sbjct: 353 GIAFA-AGAGRAILADDMGLGKTIQGIGVAELLANLSDISRVLVVCPASLKSQWRDEINR 411
Query: 238 WLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKR--NIPLDGLFNIISYDVVLKLQNILMS 295
+ S RS I+ +R D F I +Y+ VL+ + +
Sbjct: 412 F-----------------SGRSSQIILGKGDERIEQYQGDAFFTICNYEQVLRDLTAVEN 454
Query: 296 SNFKIVIADESHFLKNAQAKRTAATLPIIKKAQ--YALLLSGTPALSRPIELFKQLEALY 353
+ ++I DE +KN ++K T +I++ + + L+LSGTP +R ELF +
Sbjct: 455 VPWDLIILDEGQRIKNWESK----TSNVIRQLESPFRLVLSGTPLENRLGELFTVTRFID 510
Query: 354 PDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQ 413
D+ +++ N++ G G + L M+ V++RR + +V QLP R +
Sbjct: 511 DDLLGPAYQFFNQHHVVDDRGKTLGYRQLDVLRETMRP-VLLRRTRAEVAKQLP-DRTDE 568
Query: 414 VFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSA----- 468
+ E Q A +++V +I A K E+ L+ + L+ ++ DS
Sbjct: 569 IIR--CEATAEQKEAHDANMKIV-AQIAAKKFMTEMDRLRIQKCLLMARMACDSTYLLDQ 625
Query: 469 -----EAKIPAVLDYLETVI-EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPP 522
+K+ + + LE +I + K ++F+ + ML I + +R+DG P
Sbjct: 626 EADEYSSKLDRLAELLEGLIADPTRKIVLFSEWRRMLSRIENRLDEIGCDYVRLDGQVPQ 685
Query: 523 ASRQALVTEFQEKDDVKAAVLSM-KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHR 581
R ALV FQ +D + V++M AG GL L AA+TVI +L W P L Q RA+R
Sbjct: 686 KKRAALVARFQ--NDPECRVINMTNAGSTGLNLQAANTVINVDLPWNPAVLEQRIARAYR 743
Query: 582 IGQVSSVNVYYLLAN 596
+GQ + V+VY L+
Sbjct: 744 MGQENPVHVYKLVTT 758
>gi|401842508|gb|EJT44686.1| ISW1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1069
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 223/476 (46%), Gaps = 51/476 (10%)
Query: 167 PAHIESKLLPFQRDGVRFALQ-HGGRI--LLADEMGLGKTIQAIAVATCFRDV----WPV 219
P ++ +L P+Q GV + + H +I +LADEMGLGKT+Q I+ R + P
Sbjct: 129 PGFVDGRLRPYQVQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPF 188
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
L++ P S +W I +W P + L G ++ K+ + D
Sbjct: 189 LVIAPKSTLNNWLREINRW--TPDVNAFI----LQGDKEGRAELIQ---KKLLGCDFDVV 239
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
+ SY+++++ ++ L +++ +I DE+H +KN ++ + + + LL++GTP
Sbjct: 240 VASYEIIIREKSPLKKIDWEYIIIDEAHRIKNEESMLSQVLREFTSRNR--LLITGTPLQ 297
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA--TVM--- 394
+ EL+ L L PD++ + ++ + + S E+ N+++ TV+
Sbjct: 298 NNLHELWALLNFLLPDIFSDAQDFDD---------WFSSESTEEDQDNIVRQLHTVLQPF 348
Query: 395 -IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF-RELEVVKGKIKACKSEEEVQSL 452
+RR+K DV L K+ +++ ++ R + ++L+ V G +S+ + ++
Sbjct: 349 LLRRIKSDVETSLLPKKELNLYVGMSNMQKRWYKKILEKDLDAVNGSNGGKESKTRLLNI 408
Query: 453 KFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAHHQ 496
+ N Y D AE P D L+ + E G + LIF+
Sbjct: 409 MMQLRKCCNHPYLFDGAEPGPPYTTDEHLIYNAAKLLVLDKLLKKLKEEGSRVLIFSQMS 468
Query: 497 PMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLT 555
+LD + +K RIDG T R + ++ E D K +L+ +AGG+G+ LT
Sbjct: 469 RVLDILEDYCFFRKYDYCRIDGSTAHEDRIQAIDDYNEPDSEKFVFLLTTRAGGLGINLT 528
Query: 556 AASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+A V+ + W P +QA DRAHRIGQ V V+ L+ +++V++ + + KL
Sbjct: 529 SADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKL 584
>gi|337293944|emb|CCB91931.1| uncharacterized ATP-dependent helicase ywqA [Waddlia chondrophila
2032/99]
Length = 868
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 224/482 (46%), Gaps = 61/482 (12%)
Query: 165 QIPAHIESKLLPFQRDGVR---FALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
+I + L P+Q+ GV F Q+G +LAD+MGLGKT+Q +A T P L
Sbjct: 420 KIGSRFHGTLRPYQQAGVEWLSFLKQNGFHGILADDMGLGKTVQILAYLTTETGGKPSLC 479
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
+ P+SL +W + + E++V L G RS K+ +P +GL +
Sbjct: 480 VMPTSLLYNWKKEAETFF----PELLVTLHH--GPERS---------KKTLPKEGLI-LT 523
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSR 341
SY +L+ +++ +S F+ + DE+ +KN + ++ A + +A + ++GTP +R
Sbjct: 524 SYGTLLRDKDLFKASAFQCIFLDEAQVIKNRRTQQFQAACEL--EAVFRCCITGTPVENR 581
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT--VMIRRLK 399
ELF L PD+ K + +E + K T ++RR K
Sbjct: 582 TEELFTHFHFLMPDLLK--------------------GCDPKETSRIKKKTGPFILRRRK 621
Query: 400 KDVLAQLPVKRRQQVFLDVAEKDMRQIYALF----RELEVVKGKIK-ACKSEEEVQSLKF 454
++V + LP K Q V++ + E + R Y F ++ + K K+ A K E+
Sbjct: 622 EEVASDLPEKIEQNVWISMPE-NQRTAYDQFAASAQQSLIQKVKLDGAGKHRMEIFETLL 680
Query: 455 TEKNLINKIY----TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKK 510
+ + Y + K+ A++ +ET+ E G K LIF+ ML I + K+
Sbjct: 681 RLRQICCHPYLVNGQEGTSGKLEALIADMETIKEEGKKALIFSQFTSMLSIIKKSCSKEG 740
Query: 511 VHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPG 570
+DG T R+ V FQ ++ ++S+KAGGVGL LTAA V+ + W P
Sbjct: 741 WKFCYLDGQT--KERKEQVDHFQTDPEIPFFLISLKAGGVGLNLTAADYVLLFDPWWNPA 798
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSS 630
QA DRAHRIG+ +V L D++++ + + +K Q+LD E S
Sbjct: 799 VERQAIDRAHRIGRKDTVIAKRYLCLDSIEEKMLHLNTAKQHLADQLLD------ETSDH 852
Query: 631 QI 632
QI
Sbjct: 853 QI 854
>gi|425437030|ref|ZP_18817458.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC 9432]
gi|389678068|emb|CCH93043.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC 9432]
Length = 1390
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 138/532 (25%), Positives = 250/532 (46%), Gaps = 43/532 (8%)
Query: 113 RLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIES 172
R F P LS + + ++ +NL QR S P ++P+ +++
Sbjct: 883 RFHPFAAPMLSELTEEVGQLKADKRWRDNL----QRFQESQDFTP-------EVPSTLQA 931
Query: 173 KLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+L +Q +G R+ + G LAD+MGLGKT+QA+AV P L + P+S+ L
Sbjct: 932 ELRDYQLEGFRWLARLARWGAGACLADDMGLGKTLQALAVILTRASEGPTLAIAPTSVCL 991
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK- 288
+W + +++ P I+ QLG +R R P D L + SY ++ +
Sbjct: 992 NWISEAERF--APTLNII----QLGTGDRQALL------DRLQPFDLL--VCSYGLLQQE 1037
Query: 289 -LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFK 347
+ +L ++ ++ DE+ +KN KR+ A + + + + L+ +GTP + EL+
Sbjct: 1038 EVATMLAGVEWQTIVLDEAQAIKNFSTKRSKAAMNL--RGDFKLITTGTPIENHLGELWN 1095
Query: 348 QLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLP 407
+ P + ++ + R+ Y + E+L L++ ++RR K VLA+LP
Sbjct: 1096 LFRFINPGLLGSLESFDRRFATP--IEKYGDKTAREQLKKLVRP-FLLRRTKNQVLAELP 1152
Query: 408 VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL----KFTEKNLINKI 463
+ V ++++ ++ AL R + + + +Q L K ++
Sbjct: 1153 PRTEILVPIELSVEEKAFYEALRRRALEKLSESDSTAGAKHLQVLAEIMKLRRACCHPQL 1212
Query: 464 YT---DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
D A +K+ + L+ +++ K L+F+ L I ++++ +DG T
Sbjct: 1213 VAPDLDLAGSKLSRFGEILDDLLDNQHKALVFSQFVDHLAIIRSYLEQRQIKYQYLDGST 1272
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P + RQ V FQ + ++S+KAGG GL LTAA VI + W P QA DRAH
Sbjct: 1273 PASDRQKQVKAFQAGEG-DVFLISLKAGGTGLNLTAADYVIHLDPWWNPAVEDQASDRAH 1331
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
RIGQ V +Y L+A DT+++ + D+ K + +L+G + S ++S+ ++
Sbjct: 1332 RIGQKRPVTIYRLVAKDTIEEKIVDLHHHKRDLADSLLEGTDASGKLSTDEL 1383
>gi|328698146|ref|XP_001952559.2| PREDICTED: DNA excision repair protein ERCC-6 [Acyrthosiphon pisum]
Length = 1136
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 221/476 (46%), Gaps = 44/476 (9%)
Query: 163 YDQIPAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAV---------- 209
Y ++P I KL +Q+ G+++ Q G +L DEMGLGKTIQ I
Sbjct: 278 YFKVPKEIWEKLYKYQKIGIKWLWELHQQGSGGILGDEMGLGKTIQMIVFFGALYWSRLK 337
Query: 210 --ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSN 267
T R + P LI+ P++L W +W PP +VV+ + G I
Sbjct: 338 DKITGIRGLGPSLIVCPATLMHQWVEEFHKWC--PPIRVVVLHETGVYKGKPGDLIKEVW 395
Query: 268 TKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKA 327
+ + I I +Y+ +L+ N L+ +N+ VI DE H ++N +K T A + K+
Sbjct: 396 SSKGIL------ITTYNGLLQHINNLLKNNWHYVILDEGHKIRNPDSKITVAAKQL--KS 447
Query: 328 QYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE---- 383
+ +++SG+P + EL+ + ++P + + + G Y A+ +
Sbjct: 448 SHRIIISGSPIQNHLKELWSLFDFIFPSKLGTLPAFIKSFAVPITHGGYANATELQITTA 507
Query: 384 -ELHNLMKATV---MIRRLKKDVLAQ--LPVKRRQQVFLDVAE--KDMRQIYALFREL-- 433
+ ++K T+ ++RR+K D+ + LP K Q +F + E K M + Y ++
Sbjct: 508 YKCATILKDTISPYLLRRMKADIQSHISLPDKNEQVLFCRLTEEQKTMYRGYLEHSDIIS 567
Query: 434 EVVKGKIKACKSEEEVQSL----KFTEKNLINKIYTD-SAEAKIPAVLDYLETVIEAGCK 488
E++ G K ++++ + NL + K+ V L+ + G +
Sbjct: 568 EIMNGSCKVFVGISRLRTICNHPDIFQTNLETGAFGYWKKSGKMIVVEALLKMWKKQGHR 627
Query: 489 FLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAG 548
L+F ML+ + +++ ++++G T SRQ ++ +F + + +L+ K G
Sbjct: 628 VLLFTQSVKMLNIFQKFIIEQNYSYLKLEGATSIGSRQPIINKFNKDPSIFVMILTTKVG 687
Query: 549 GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVW 604
G+G+ L A VI + W P +QA +RA RIGQ +SV +Y LL T+++ ++
Sbjct: 688 GLGVNLIGADRVIIFDPDWNPATDLQARERAWRIGQTNSVTIYRLLTAGTIEEKIY 743
>gi|357052557|ref|ZP_09113663.1| hypothetical protein HMPREF9467_00635 [Clostridium clostridioforme
2_1_49FAA]
gi|355386563|gb|EHG33601.1| hypothetical protein HMPREF9467_00635 [Clostridium clostridioforme
2_1_49FAA]
Length = 1050
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 217/463 (46%), Gaps = 38/463 (8%)
Query: 167 PAHIESKLLPFQRDG---VRFALQHGGRILLADEMGLGKTIQAIAV---ATCFRDVWPVL 220
P + L +QR G +R +G +LAD+MGLGKTIQ IA+ A + P L
Sbjct: 577 PERLRGVLREYQRIGYVWLRTLDSYGFGGILADDMGLGKTIQIIALLESAYGSGEQSPSL 636
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
I+ P+SL +W I+++ P +++ V+ GS R R+ + I
Sbjct: 637 IICPASLVYNWEHEIRRF--APDLKVLSVVGS--GSEREDLLKEVGRNSRDYQV----II 688
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
SYD++ + + +F+ + DE+ ++KNA + A + + ++AL +GTP +
Sbjct: 689 TSYDLLRRDIGLYEGVHFRYQVIDEAQYIKNASTQSARAVKSLDVQTRFAL--TGTPVEN 746
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKK 400
R EL+ + L P + Y V I G + E M ++RR+KK
Sbjct: 747 RLGELWSIFDYLMPGFLFGSQFFKKEY---EVPIIRDGDAAALERLKRMIGPFVLRRIKK 803
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYAL----FRELEVVKGKIKACKSEEEVQSLKFTE 456
DVL +LP K + V+ + E + +++YA F+E G +A + + ++ E
Sbjct: 804 DVLKELPDKMEEVVYSNF-EPEQKKLYAANAAKFKEKLSTGGFDRAGEGKLQI----LAE 858
Query: 457 KNLINKIYTD---------SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFL 507
+ +I D AK+ +D + + G K L+F+ MLD IH
Sbjct: 859 LMRLRQICCDPRLCYDNYRGGSAKLETCMDLVRRGVAGGHKILLFSQFTSMLDIIHIRLE 918
Query: 508 KKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSW 567
K+ + + G T R LV +F KD+V ++S+KAGG GL LTAA VI + W
Sbjct: 919 KEGIKSHLLTGATSKEERIRLVGDFG-KDEVPVFLISLKAGGTGLNLTAADIVIHYDPWW 977
Query: 568 TPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
QA DR HRIGQ V VY L+ +T+++ + + +K
Sbjct: 978 NAAAQNQATDRTHRIGQDKQVTVYKLITRNTIEENILKLQEAK 1020
>gi|429755153|ref|ZP_19287826.1| protein, SNF2 family [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429175617|gb|EKY17052.1| protein, SNF2 family [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 950
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 230/500 (46%), Gaps = 65/500 (13%)
Query: 158 DLREKYDQIPA-HIESKLLPFQRDGVRFALQH---GGRILLADEMGLGKTIQAIAVATCF 213
+L EK + P+ ++ + L P+Q +GV + LQH G LAD+MGLGKT+Q IA+
Sbjct: 461 NLVEKVNYTPSPNLRATLRPYQIEGVEWLLQHYYNGVGACLADDMGLGKTLQTIALLVAI 520
Query: 214 RDVWP---------------------VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQ 252
D P VL++ PSSL +W +++ P +Q
Sbjct: 521 HDALPEKAIETADLFSGIEKSKEALKVLVILPSSLIFNWYDETKRF---APH---FKCTQ 574
Query: 253 LGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA 312
G++R KR D +F SY +V + + F+ +I DES +KN
Sbjct: 575 YVGTDRK------VKAKRLGNYDVVFT--SYPIVERDVELFQKYEFRYIILDESQRIKNK 626
Query: 313 QAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV 372
+K A + KA + + LSGTP + +L+ Q++ + P++ K+ Y + Y V
Sbjct: 627 NSKTFKAIHTL--KATHRIALSGTPIENSLSDLWSQMQFINPNILKS---YASFYKNYEV 681
Query: 373 -FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFR 431
+ A EEL ++ + ++RR K+ VL LP Q ++ ++E A +
Sbjct: 682 EISKKKNAQALEELKTII-SPFLLRRTKEQVLDDLPEMEEQIIYCPMSE-------AQHK 733
Query: 432 ELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDS------------AEAKIPAVLDYL 479
E K K++ + +F N++ ++ S A K V++Y+
Sbjct: 734 WYETEKSKVRNQLLQINEPITEFNTLNMLMRLRKISLHPKLVDKESKIASGKYEEVINYM 793
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
E ++++ K LIF+ L + KK + ++ G TP R+ V FQ +
Sbjct: 794 EELLQSSRKALIFSSFVSHLALYEEWCNKKGIKYAKLTGETPSFERKNQVEMFQNNPSIS 853
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+S+KAG VGL LT AS V+ + W P QA RAHRIGQ + VNV ++ DT+
Sbjct: 854 FFFISLKAGEVGLNLTQASYVLLLDPWWNPFSEKQAIGRAHRIGQQNKVNVIRFVSKDTI 913
Query: 600 DDIVWDVVRSKLENLGQVLD 619
++ + + +SK E ++D
Sbjct: 914 EEKIIKLQKSKTELSENIID 933
>gi|126699796|ref|YP_001088693.1| DEAD/DEAH box helicase [Clostridium difficile 630]
gi|115251233|emb|CAJ69064.1| putative DEAD-like helicase [Clostridium difficile 630]
Length = 1062
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 235/501 (46%), Gaps = 61/501 (12%)
Query: 165 QIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPV 219
+IPA++ + L +Q +G+ + + GG +LADEMGLGKTIQ IA +
Sbjct: 602 EIPANLNANLRDYQINGLNWFKVLDYYKFGG--ILADEMGLGKTIQTIAFLLSLSNK-KS 658
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
LI+TP+SL +W +++ +I V+L +R + N
Sbjct: 659 LIVTPTSLIYNWKNEFEKF----APDIKVLLIHGNKRDREKCFMELEN------------ 702
Query: 280 IISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
+DV+L L + F I DE+ +KN A T + I + ++AL
Sbjct: 703 ---FDVILTTYGTLRNDLEKYSEIKFDYCILDEAQNIKNPVALVTESVKSINAENKFAL- 758
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIY-QGASNHEELHNLMKA 391
+GTP + +EL+ + + P G Y K ++ N + L L+K
Sbjct: 759 -TGTPMENNLLELWSIFDFIMP---------GYLYSKAKFQELFINKEDNVKNLKKLIKP 808
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQS 451
++ RR KK V+ +LP K + F+++ K+ ++IY+++ + K K K K ++ V
Sbjct: 809 FIL-RRSKKQVMKELPDKIEKNFFVEL-NKEQKKIYSVYSKDIQDKMKDKNLKKDKIVIF 866
Query: 452 LKFT-------EKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
T + +++ K Y + +KI L+ L I K L+F+ +L I +
Sbjct: 867 SYLTKLRQLCLDPSIVVKDYNKKS-SKIETCLEILRDSINENHKILLFSQFTSVLKNISK 925
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
K K+ IDG T R LV EF D K ++S+KAGG GL LT+A VI +
Sbjct: 926 ELDKYKIKYHYIDGKTNAKERLELVDEFNNSMDKKVFLISLKAGGTGLNLTSADMVIHFD 985
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 624
W P QA DRAHR GQ +SV V L+A T+++ + + SK E + Q ++G
Sbjct: 986 PWWNPSVENQASDRAHRFGQKNSVQVIKLIAKGTIEEKIIKLQESKKELINQFING---- 1041
Query: 625 LEVSSSQIRSSPAKQKTLDSF 645
E+S+ + S + ++ ++ F
Sbjct: 1042 -ELSNEGVLKSLSDEEIINLF 1061
>gi|257064055|ref|YP_003143727.1| DNA/RNA helicase [Slackia heliotrinireducens DSM 20476]
gi|256791708|gb|ACV22378.1| DNA/RNA helicase, superfamily II, SNF2 family [Slackia
heliotrinireducens DSM 20476]
Length = 907
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 234/490 (47%), Gaps = 70/490 (14%)
Query: 158 DLREKYDQIPAHIESKLLPFQRDGVRF---ALQHG-GRILLADEMGLGKTIQAIAVATCF 213
D++E Q+P L P+Q++G + +++G G +LAD+MGLGKT Q I V
Sbjct: 434 DVQEAEYQVPIAFTGTLRPYQQEGFAWLNSRMENGFGGAILADQMGLGKTAQTIVVMVYR 493
Query: 214 RDV----WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTK 269
R+ P +++ PSSL +W A +++ P ++V + +G + I +
Sbjct: 494 RNTKNRSRPCMVVCPSSLVQNWLAEFERF--APDMDVV---AAVGPRAKRALDIAHA--- 545
Query: 270 RNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQY 329
+ D L + SYD + + + S F I+ DE++ +KN K A + K +
Sbjct: 546 --VEHDVL--VTSYDALWRDIELYDRSEFDIIALDEANRIKNPATKSARACKRL--KGEG 599
Query: 330 ALLLSGTPALSRPIELFKQLEALYPDVY-KNVHEYGNRYCKGGVFGIYQGASNHEELHNL 388
+ ++GTP +R EL+ ++ P + +N ++ +RY V G +EE +
Sbjct: 600 RIAITGTPVENRLSELYSIMDFCIPGMLARNYEQFRSRYETPIVRG-------NEEATSK 652
Query: 389 MKATV---MIRRLKKDVLAQLPV-------------------KRRQQVFLDVAEKDMRQI 426
+KA V ++RRL ++VL LP R Q++ +AE+DM I
Sbjct: 653 LKALVEPFILRRLTREVLTDLPELVESVHYAPMTVEQSRLYHAREQRLQSKLAERDMEDI 712
Query: 427 YALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAG 486
L E+ + + C + L+ + Y D K+ A+++ +E E G
Sbjct: 713 QLL---AEITRLRQVCC------------DPGLVYEDY-DGGSGKLDAIVNLVEQAREVG 756
Query: 487 CKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMK 546
K +IF+ L++I + + + I G TP + R +V F KD+ ++SM+
Sbjct: 757 SKTVIFSQWVSFLESISKRLNRNGIAHDWIIGDTPASDRVGIVDAFN-KDETPVLLVSMR 815
Query: 547 AGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDV 606
AGGVGL +T AST I A+ W QA R R+GQ SSV VY ++A +T++D +
Sbjct: 816 AGGVGLNMTGASTAIIADPFWHEAAQTQAYSRLWRLGQDSSVFVYQIIAENTIEDRILG- 874
Query: 607 VRSKLENLGQ 616
++ K +LG+
Sbjct: 875 LQHKKHDLGE 884
>gi|393245259|gb|EJD52770.1| SNF2 family DNA-dependent ATPase [Auricularia delicata TFB-10046
SS5]
Length = 1033
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 236/480 (49%), Gaps = 45/480 (9%)
Query: 163 YDQIPAHIES-KLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDV-- 216
+++ P +I+ K+ +Q G+ + +L H G +LADEMGLGKT+Q ++ R +
Sbjct: 118 FEESPTYIKGGKMRDYQVQGLNWMISLHHNGMNGILADEMGLGKTLQTVSFLGYLRHIRG 177
Query: 217 --WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P S +WA ++W P + +VV L G+ IV+ KR +P
Sbjct: 178 ITGPHLVVVPKSTLQNWAREFERW--TPDASVVV----LQGTREERAEIVA---KRLLPQ 228
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
D I SY++ ++ + L +F+ ++ DE+H +KN + + + + + +L++
Sbjct: 229 DFDILITSYEICMREKGALKKFSFEYIVIDEAHRIKNMDSILSQIVRMFLSRGR--MLIT 286
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNH---EELHNLMKA 391
GTP + ELF L + P+++ + + + KG + + ++ E LH +++
Sbjct: 287 GTPLQNNLQELFALLNFICPEIFSDYKDLESFLHKGDKEEMTEEDASKVVVEALHKILRP 346
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY---ALFRELEVVKGKIKACKSEEE 448
++RR+K DV L K+ +++ ++ DM++ + L ++++ V G + +
Sbjct: 347 -FLLRRVKSDVEKSLLPKKEINIYVGLS--DMQRKWYRSVLEKDIDAVNGLTGKKEGKTR 403
Query: 449 VQSLKFTEKNLINKIYT-DSAEAKIP--------------AVLDYLETVIEA-GCKFLIF 492
+ ++ + + Y D AE P +LD L ++ G + LIF
Sbjct: 404 LMNIVMQLRKVTCHPYLFDGAEPGPPYTTGEHLVENSGKMIILDKLLKAMKVKGSRVLIF 463
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVG 551
+ +LD + L ++ RIDGGT R A + E+ + K +L+ +AGG+G
Sbjct: 464 SQMSRVLDILEDYCLYRQYQYCRIDGGTAHEDRIASIDEYNKPGSEKFIFLLTTRAGGLG 523
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ LT+A V+ + W P +QA DRAHRIGQ V V+ +A +V++ + + KL
Sbjct: 524 INLTSADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFIAEGSVEERMLERAAQKL 583
>gi|423088563|ref|ZP_17076942.1| protein, SNF2 family [Clostridium difficile 70-100-2010]
gi|357559449|gb|EHJ40897.1| protein, SNF2 family [Clostridium difficile 70-100-2010]
Length = 1059
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 235/501 (46%), Gaps = 61/501 (12%)
Query: 165 QIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPV 219
+IPA++ + L +Q +G+ + + GG +LADEMGLGKTIQ IA +
Sbjct: 599 EIPANLNANLRDYQINGLNWFKVLDYYKFGG--ILADEMGLGKTIQTIAFLLSLSNK-KS 655
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
LI+TP+SL +W +++ +I V+L +R + N
Sbjct: 656 LIVTPTSLIYNWKNEFEKF----APDIKVLLIHGNKRDREKCFMELEN------------ 699
Query: 280 IISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
+DV+L L + F I DE+ +KN A T + I + ++AL
Sbjct: 700 ---FDVILTTYGTLRNDLEKYSEIKFDYCILDEAQNIKNPVALVTESVKSINAENKFAL- 755
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIY-QGASNHEELHNLMKA 391
+GTP + +EL+ + + P G Y K ++ N + L L+K
Sbjct: 756 -TGTPMENNLLELWSIFDFIMP---------GYLYSKAKFQELFINKEDNVKNLKKLIKP 805
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQS 451
++ RR KK V+ +LP K + F+++ K+ ++IY+++ + K K K K ++ V
Sbjct: 806 FIL-RRSKKQVMKELPDKIEKNFFVEL-NKEQKKIYSVYSKDIQDKMKDKNLKKDKIVIF 863
Query: 452 LKFT-------EKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
T + +++ K Y + +KI L+ L I K L+F+ +L I +
Sbjct: 864 SYLTKLRQLCLDPSIVVKDYNKKS-SKIETCLEILRDSINENHKILLFSQFTSVLKNISK 922
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
K K+ IDG T R LV EF D K ++S+KAGG GL LT+A VI +
Sbjct: 923 ELDKYKIKYHYIDGKTNAKERLELVDEFNNSMDKKVFLISLKAGGTGLNLTSADMVIHFD 982
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 624
W P QA DRAHR GQ +SV V L+A T+++ + + SK E + Q ++G
Sbjct: 983 PWWNPSVENQASDRAHRFGQKNSVQVIKLIAKGTIEEKIIKLQESKKELINQFING---- 1038
Query: 625 LEVSSSQIRSSPAKQKTLDSF 645
E+S+ + S + ++ ++ F
Sbjct: 1039 -ELSNEGVLKSLSDEEIINLF 1058
>gi|330796151|ref|XP_003286132.1| hypothetical protein DICPUDRAFT_150076 [Dictyostelium purpureum]
gi|325083877|gb|EGC37318.1| hypothetical protein DICPUDRAFT_150076 [Dictyostelium purpureum]
Length = 2186
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 146/514 (28%), Positives = 241/514 (46%), Gaps = 59/514 (11%)
Query: 172 SKLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIAVATCFRDV----WPVLILTP 224
+KL P+Q +G+ R+ + +L DEMGLGKT+Q++++ R P L++ P
Sbjct: 490 NKLRPYQLEGLNWLRYCWFNQRNSILGDEMGLGKTVQSVSILETLRKAHDIRGPFLVVAP 549
Query: 225 SSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSS-----NTKRNIPLDGL-F 278
+ HW + W ++ +V G +G I+ + K P + + F
Sbjct: 550 LTTIPHWKREFENWTDMNS----LVYHDTG----AGRPILRNYEFYFKDKSGKPTNVVKF 601
Query: 279 NII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
N++ +Y++ + ++ L +K ++ DE+H LKN Q K T+ + LLL+GT
Sbjct: 602 NVLITTYEMAISDRSYLSKIKWKYLVIDEAHRLKNKQCKLTSELKTY--HFDHLLLLTGT 659
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIR 396
P + EL+ L L P + + E+ FG + A +L NL+K ++R
Sbjct: 660 PLQNNTQELWALLNFLEPSKFNKLAEFLVE------FGDLKQAEQVSKLQNLLKP-YLLR 712
Query: 397 RLKKDVLAQLPVKRRQQVFLD---VAEKDMRQIY----ALFRE----------LEVVKGK 439
R+K+ V + K V ++ V +K R IY A R+ L ++
Sbjct: 713 RMKERVEKSIAPKEETIVEVELTMVQKKYYRAIYEKNFAFLRKNCKGQQGPSLLNIMMEL 772
Query: 440 IKACKSEEEVQSLKFTEKNLI---NKIYTD--SAEAKIPAVLDYLETVIEAGCKFLIFAH 494
K C ++ ++ +E N I +++YT A K+ V L + G K LIF+
Sbjct: 773 RKCCNHPYLIKGVEHSETNEISEKDEVYTKLIQASGKLVLVDKLLPKLKAGGHKVLIFSQ 832
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD-DVKAAVLSMKAGGVGLT 553
+LD + + RIDG RQA + F + D D +L +AGG+G+
Sbjct: 833 MVSVLDILDDYLTFRGYPHERIDGSIKGNDRQAAIDRFSKPDSDRFVFLLCTRAGGIGIN 892
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLEN 613
LTAA TVI + W P + +QA+ R HRIGQ V VY L+ +T + +++D KL
Sbjct: 893 LTAADTVIIFDSDWNPQNDLQAQARCHRIGQDKMVKVYRLVTKNTYERLMFDRASKKL-G 951
Query: 614 LGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLK 647
L +V+ NSL +S + P K+ T++S LK
Sbjct: 952 LDRVVLTKMNSLNQTSKE--EVPDKE-TINSLLK 982
>gi|410619635|ref|ZP_11330529.1| helicase [Glaciecola polaris LMG 21857]
gi|410160767|dbj|GAC34667.1| helicase [Glaciecola polaris LMG 21857]
Length = 1435
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 140/491 (28%), Positives = 240/491 (48%), Gaps = 53/491 (10%)
Query: 165 QIPAHIESKLLPFQRDGVRFA--LQH-GGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
QIP+ +++L +Q G +A L H G LAD+MGLGKT+QA+A+ P L+
Sbjct: 959 QIPSTFQAQLRDYQLVGFDWASRLAHWGAGACLADDMGLGKTLQALAILLSRASHGPSLV 1018
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNT-KRNIPLD--GLF 278
+ P+S+ +W Q+ L P+ + + + S+NT +R + L+ G F
Sbjct: 1019 IAPTSVCFNWQ---QEALKFAPTLNIKLFAD------------STNTLQREVLLNELGPF 1063
Query: 279 N--IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
+ IISY ++ + +L ++ ++ADE+ LKN AKRT A + K+ + ++ +GT
Sbjct: 1064 DCVIISYGLLQRESELLKGVHWHSIVADEAQALKNPLAKRTKAAYAL--KSDFKMITTGT 1121
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEEL-----HNLMKA 391
P + EL+ + P + N+ +G R F + +N + L +K
Sbjct: 1122 PIENNLTELWSLFRFINPGLLGNIKRFGER------FSLPIENANEDPLAARKASQALKT 1175
Query: 392 TV---MIRRLKKDVLAQLPVKRRQQVFLDVA--EKDMRQIYALFRELEVVKGKIKACKSE 446
+ ++RR+K VL +LP + + ++++ E+D + L + +G +A E
Sbjct: 1176 VIQPFILRRMKNQVLTELPSRTEINIRVEMSAQERDFYEALRLNAIDNISQGDQQANAGE 1235
Query: 447 EEVQSL----KFTEKNLINKIYTDSAEAKIPAV-----LDYLETVIEAGCKFLIFAHHQP 497
+ ++ L K + K+ AE IP+ + LE + K LIF+
Sbjct: 1236 QRIKMLAELVKLRQACCNPKLVM--AETTIPSAKLAALDELLEELKLNNHKALIFSQFVG 1293
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
L I Q K +DG TP RQ V FQ + + ++S+KAGG GL LTAA
Sbjct: 1294 HLHLIKQHIEAKGFRYQYLDGSTPQKQRQQSVNAFQ-RGEGDIFLISLKAGGSGLNLTAA 1352
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
VI + W P QA DRAHRIGQ+ V +Y L+ +T+++ + + + K + ++
Sbjct: 1353 DYVIHMDPWWNPAVEEQASDRAHRIGQLRPVTIYRLITQNTIEEKIVALHQHKRDLADRL 1412
Query: 618 LDGHENSLEVS 628
L+G+E + ++S
Sbjct: 1413 LEGNEAATKLS 1423
>gi|404483458|ref|ZP_11018680.1| hypothetical protein HMPREF1135_01740 [Clostridiales bacterium
OBRC5-5]
gi|404343340|gb|EJZ69702.1| hypothetical protein HMPREF1135_01740 [Clostridiales bacterium
OBRC5-5]
Length = 1141
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 139/490 (28%), Positives = 227/490 (46%), Gaps = 49/490 (10%)
Query: 159 LREKYDQI-------PAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQA 206
L EK+D I PA + + L +Q++G ++ L GG +LAD+MGLGKT+Q
Sbjct: 658 LIEKFDNIKSMDFVPPAEVSNVLRKYQKEGFKWLRSVEELGFGG--ILADDMGLGKTLQI 715
Query: 207 IAV---ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTI 263
I++ A + LI+ P+SL +W+ I ++ E+ V + R
Sbjct: 716 ISLLIDAKKNGRLKKALIVCPASLVYNWSEEISKF--DTKGELRVCVLAAAKEER----- 768
Query: 264 VSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATL 321
+++I F+I SYD + + ++ F I DE+ F+KN A
Sbjct: 769 -----QKSIEEHEAFDIYISSYDTLRRDISLYHDMRFSHQIIDEAQFIKNQNTGVAKAVK 823
Query: 322 PIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASN 381
+ +YAL +GTP +R EL+ + + P + + + ++Y V G
Sbjct: 824 TVKADVKYAL--TGTPIENRLSELWSIFDYIMPGFLYSYNSFKSKYENTIV---KDGNDE 878
Query: 382 HEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIK 441
+L + M + ++RRLK +V LP K + + V+ D +Q A EL +K +
Sbjct: 879 SAKLLSKMISPFVLRRLKSEVATDLPDKIEE---VRVSRFDKKQQLAYDTELTKLKNVLN 935
Query: 442 ACKSEEEVQSLKFTEKNLINKIYTDSA---------EAKIPAVLDYLETVIEAGCKFLIF 492
+ + + +E + +I D AK+ +D +++ IEAG K L+F
Sbjct: 936 GNEEYNSSKMIILSEITKLRQICCDPGLIFEDYTGDSAKLETCIDLVKSGIEAGHKILLF 995
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGL 552
+ MLD I + F ++ + I G T R LV +F DD ++S+KAGG GL
Sbjct: 996 SQFTSMLDIIKKRFEEENISSYVITGSTSKEKRIKLVNDFN-NDDTNVFLISLKAGGTGL 1054
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W QA DRAHRIGQ + V VY L+A T+++ + + SK +
Sbjct: 1055 NLVGADIVIHYDPWWNFAAQNQATDRAHRIGQKNKVTVYRLIAKGTIEEKIVKLQESKKD 1114
Query: 613 NLGQVLDGHE 622
+VL+ E
Sbjct: 1115 LADRVLNFEE 1124
>gi|410917974|ref|XP_003972461.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Takifugu rubripes]
Length = 1036
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 240/499 (48%), Gaps = 55/499 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAV---ATCFR 214
++D P+++++ K+ +Q G+ + + ++G +LADEMGLGKT+Q IA+ +R
Sbjct: 149 RFDDSPSYVKTGKMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTIALLGYMKHYR 208
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
++ P ++L P S +W ++W+ PS V L +G + I R++
Sbjct: 209 NIPGPHMVLVPKSTLYNWMNEFKRWV---PSLRAVCL--IGDRDERTALI------RDVL 257
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
L G +++ SY++++ + + N++ ++ DE+H +KN ++K + K L
Sbjct: 258 LPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF--KTTNRL 315
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
LL+GTP + EL+ L L PDV+ + ++ + + G + E LH +++
Sbjct: 316 LLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNCLGDQKLV---ERLHTVLRP 372
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RR+K DV L K+ ++++ ++ K R+ Y L ++++++ K K +
Sbjct: 373 -FLLRRIKADVEKTLLPKKELKIYVGLS-KMQREWYTKILMKDIDILNSAGKMDKMR--L 428
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LETVIEAGCKFLIFA 493
++ + N Y D AE P D L + + G + LIF+
Sbjct: 429 LNILMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVVLDKLLPKLKDQGSRVLIFS 488
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
+LD + + + R+DG TP RQ + F E + K +LS +AGG+G+
Sbjct: 489 QMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSKFIFMLSTRAGGLGI 548
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA DRAHRIGQ V V+ + +TV++ + + KL
Sbjct: 549 NLATADVVILFDSDWNPQVDLQAMDRAHRIGQQKQVRVFRYITENTVEERIVERAEMKLR 608
Query: 613 ------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 609 LDSIVIQQGRLVDPSANKL 627
>gi|333984366|ref|YP_004513576.1| SNF2-like protein [Methylomonas methanica MC09]
gi|333808407|gb|AEG01077.1| SNF2-related protein [Methylomonas methanica MC09]
Length = 1406
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 140/535 (26%), Positives = 256/535 (47%), Gaps = 53/535 (9%)
Query: 127 KVLSEISGYNVEIENLHPLV----------------QRAIASASAAPDLREKYDQIPAHI 170
K +EISG V + L L Q I A D R Q+P+
Sbjct: 889 KAYAEISGKKVRLNPLAALTLEDWQDEAGFKADKHWQNHIQRLQQARDYRP---QVPSTF 945
Query: 171 ESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSL 227
+++L +Q DG R+ Q G LAD+MGLGKT+Q +A+ P LI+ P+S+
Sbjct: 946 QAELRDYQLDGYRWLARLAQWGVGACLADDMGLGKTVQGLALLVERAPAGPSLIVAPTSV 1005
Query: 228 RLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVL 287
+W +++ P+ +VL GG +R N + P D L I SY ++
Sbjct: 1006 CANWENEARRF---APTLNPMVL---GGGDRQRLL---ENLR---PFDVL--ICSYGLLQ 1051
Query: 288 KLQ--NILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIEL 345
+ Q +L F+ + DE+ ++KN +R+ + + +A++ ++++GTP + EL
Sbjct: 1052 QEQVAELLAEIPFQTAVLDEAQWIKNIATRRSQGAMNL--QAEFKIIMTGTPLENHLGEL 1109
Query: 346 FKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
+ + P + ++ ++ R+ G + ++L L++ ++ RR K VL +
Sbjct: 1110 WNLFRFINPGLLGSMEQFNQRFA--GPIERDRNTQAKQQLKKLIQPFIL-RRTKTQVLQE 1166
Query: 406 LPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEK-------- 457
LP + +++++++++ AL R+ + G A ++++Q L K
Sbjct: 1167 LPPRTEIPIYIELSQEEKVFYEALRRDSIAMLGSSDAPPGQKQLQILAAITKLRRSCCNT 1226
Query: 458 NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRID 517
L+N + +K+ A + +E +++ K L+F+ L I ++ + +D
Sbjct: 1227 RLVNAD-LELPSSKLAAFGEIVEELLDNKHKALVFSQFVDHLQLIKGYIEQRGIAYQYLD 1285
Query: 518 GGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
G TP RQ V FQ + + + ++S+KAGGVGL LTAA VI + W P QA D
Sbjct: 1286 GSTPVKERQKRVDAFQ-RGEGELFLISLKAGGVGLNLTAADYVIHMDPWWNPAVEDQASD 1344
Query: 578 RAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
RAHR+GQ V +Y ++A +T+++ + + K + +LDG + S ++S+ +
Sbjct: 1345 RAHRMGQQRPVTIYRMIAKNTIEEKIVALHSHKRDLADSLLDGADISGKMSADDL 1399
>gi|290978132|ref|XP_002671790.1| predicted protein [Naegleria gruberi]
gi|284085362|gb|EFC39046.1| predicted protein [Naegleria gruberi]
Length = 1069
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 230/479 (48%), Gaps = 62/479 (12%)
Query: 167 PAHIESKLL-PFQRDGVRFALQ---HGGRILLADEMGLGKTIQA---IAVATCFRDV-WP 218
P IE+ L +Q DGV + ++ G +LADEMGLGKT+Q IA R + P
Sbjct: 192 PKFIENTTLRSYQIDGVNWMIRLHDRGVNGILADEMGLGKTVQTLTWIAYLKFIRRIRGP 251
Query: 219 VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
L++ P S+ +W QW PS + VL G ++ K + G F
Sbjct: 252 HLVIVPKSVIPNWVNQANQWC---PS--LQVLKFHGDKDQR------REIKEKSLVGGKF 300
Query: 279 NII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
I+ SY+ +K + L + +I DE+H +KN + + + + QY LLL+GT
Sbjct: 301 EIVVTSYETAIKEKAALNKFRWYSIIIDEAHRIKNENSILSQSVR--VFDCQYRLLLTGT 358
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG-ASNH--EELHNLMKATV 393
P + EL+ L L PDV+++ ++ F + +G A H ++LH ++K
Sbjct: 359 PLQNNLHELWSLLNFLLPDVFRSADDFDT------WFNLKEGQAETHIIDQLHKVLKP-F 411
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY---ALFRELEVVKGKIKACKSEEEVQ 450
++RRLK +V +P K+ +++++ +++ + L ++L +KG K +
Sbjct: 412 LLRRLKTEVKTDIPPKK--EIYVECGLSKLQKEWYRSILTKDLNSIKGGEKV-----RLL 464
Query: 451 SLKFTEKNLINKIYT-DSAEAKIPAVL-DYL--------------ETVIEAGCKFLIFAH 494
++ + N Y D AE P L D+L + + E + LIF
Sbjct: 465 NVVMQLRKCCNHPYLFDGAEPGPPYTLGDHLMNNSGKMYLVDKLLKKLKEQNSRVLIFTQ 524
Query: 495 HQPMLDAIHQ-LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + +L+ +C RIDG T R+ + EF ++ K +LS +AGG+G+
Sbjct: 525 MTRMLDILEDYCYLRNYEYC-RIDGQTSSELREQHMDEFNKEGSSKFIFLLSTRAGGLGI 583
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
L A TVI + W P +QA+DR HRIGQ VNVY L++ D++++ ++ KL
Sbjct: 584 NLATADTVIIYDSDWNPQADLQAQDRCHRIGQKKPVNVYRLISKDSIEEKIYQRAVKKL 642
>gi|334129317|ref|ZP_08503122.1| SNF2-like helicase [Methyloversatilis universalis FAM5]
gi|333445543|gb|EGK73484.1| SNF2-like helicase [Methyloversatilis universalis FAM5]
Length = 1104
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 148/496 (29%), Positives = 235/496 (47%), Gaps = 75/496 (15%)
Query: 167 PAHIESKLLPFQRDGVRFALQH------GGRILLADEMGLGKTIQAIA----VATCFRDV 216
PA +L P+QR+G+ + LQH GG +LAD+MGLGKT Q +A R
Sbjct: 632 PAGFGIELRPYQREGLAW-LQHLRAHDLGG--ILADDMGLGKTAQTLAHLLTEKRAGRLD 688
Query: 217 WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSG-FTIVSSNTKRNIPLD 275
P L++ P+SL +W ++ E+ V+ +L G +R+ F +S +
Sbjct: 689 RPALVVLPTSLVFNWQREAARF----APELRVL--KLHGPDRAKLFERISEHD------- 735
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA--QAKRTAATLPIIKKAQYALLL 333
+ +Y ++ + L + ++ ++I DE+ +KNA QA R L +A++ L L
Sbjct: 736 --VCLTTYPLLWRDHEKLAAHDYHLLILDEAQTVKNAGSQAARAVRLL----RARHRLCL 789
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQ-GASNHEELHNLMKAT 392
+GTP + EL+ Q + L P E+ +G I + G EL A
Sbjct: 790 TGTPLENHLGELWAQFDFLLPGFLGEQKEF----TRGWRTPIEKHGDPIRRELLARRVAP 845
Query: 393 VMIRRLKKDVLAQLPVKRR--QQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQ 450
++RR K DV A LP K + V L ++D L+ + V K + EE+
Sbjct: 846 FILRRRKDDVAADLPPKTEVVRTVELTGRQRD------LYETVRVAMDK----RVREEIA 895
Query: 451 SLKFTEKNLI---------------NKIYTDSA-----EAKIPAVLDYLETVIEAGCKFL 490
+ F ++ + TD+A AK+ ++D LE+++ G K L
Sbjct: 896 NRGFARARIVILDALLKLRQVCCDPRLLKTDAAARVKERAKLELLMDMLESLLAEGRKVL 955
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGV 550
+F+ MLD IH+ ++ + C+ + G T +R+A+V FQE V ++S+KAGGV
Sbjct: 956 VFSQFTGMLDLIHEQLVEAGIGCVMLTGDT--QNREAVVRRFQEGT-VPVFLISLKAGGV 1012
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
GL LTAA TVI + W P QA DRAHRIGQ V VY L+ ++++ + + K
Sbjct: 1013 GLNLTAADTVIHYDPWWNPAAENQASDRAHRIGQDKPVFVYKLIVAGSIEERIVALQEKK 1072
Query: 611 LENLGQVLDGHENSLE 626
+L E +LE
Sbjct: 1073 AALAEGILGNDEAALE 1088
>gi|445114492|ref|ZP_21377954.1| hypothetical protein HMPREF0662_01006 [Prevotella nigrescens F0103]
gi|444840721|gb|ELX67747.1| hypothetical protein HMPREF0662_01006 [Prevotella nigrescens F0103]
Length = 1345
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 242/466 (51%), Gaps = 31/466 (6%)
Query: 166 IPAHIESKLLPFQRDGVRF---ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
+P + ++L +Q +G + G + LAD+MGLGKT+Q IA+ L++
Sbjct: 885 VPKTLNTQLRDYQEEGFEWLSKVTSWGAGVCLADDMGLGKTLQTIALLLEQSSKGASLVV 944
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSG-FTIVSSNTKRNIPLDGLFNII 281
P+S+ +W ++++ P+ V+VL+Q NR+ V + G +I
Sbjct: 945 APASVVPNWRNELRRF---APTLNVIVLNQ--SDNRTADIEKVQA---------GDVVVI 990
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSR 341
+Y ++ Q IL + +V DE+H +KNA K + A + + KA+ ++L+GTP +
Sbjct: 991 TYMLLNIEQKILTEHEWVVVCLDEAHTIKNANTKMSKAAMQL--KARRKVILTGTPIQNH 1048
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKD 401
EL+ + + P + + ++ ++ + + G Y +L L+ A ++RR K +
Sbjct: 1049 LSELWNLFQFINPGLLGSAEQFKQKFIQP-IEG-YNDKERQSQLRRLI-APFLLRRTKGE 1105
Query: 402 VLAQLPVKRRQQVFLDVAEKDMRQIYALFREL--EVVKG-KIKACKSEEEVQSLK--FTE 456
V+ +LP K Q+ ++++ ++ +Y + R++ E+V+ K + E+ L+
Sbjct: 1106 VIKELPDKTDIQLPVELSSNEI-TMYEMHRKMVEEMVRSDKSLNVSTLAEITKLRQMACS 1164
Query: 457 KNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRI 516
+L++K + +K+ A +D E++ ++G + L+F+ L+ + ++ + +
Sbjct: 1165 CSLVDKSWK-VPSSKLLAFIDLAESLNDSGNRALVFSQFTSFLEEVRYAMDNAQLPYLYL 1223
Query: 517 DGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAE 576
DG TP A R+ LV +FQ ++S+KAGG+GL LT A+ V+ + W P QA
Sbjct: 1224 DGSTPMAKREQLVKDFQS-GRCPFFLISLKAGGLGLNLTGANYVVHLDPWWNPAIEQQAT 1282
Query: 577 DRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
DRA+RIGQ V VY+L++ T+++ + + ++K + +L+G +
Sbjct: 1283 DRAYRIGQQQDVTVYHLISQHTIEEKILRLHKTKRDLADSLLEGSD 1328
>gi|425449259|ref|ZP_18829100.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC 7941]
gi|389764135|emb|CCI09469.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC 7941]
Length = 1390
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 138/532 (25%), Positives = 250/532 (46%), Gaps = 43/532 (8%)
Query: 113 RLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIES 172
R F P LS + + ++ +NL QR S P ++P+ +++
Sbjct: 883 RFHPFAAPMLSELTEEVGQLKADKRWRDNL----QRFQESQDFTP-------EVPSTLQA 931
Query: 173 KLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+L +Q +G R+ + G LAD+MGLGKT+QA+AV P L + P+S+ L
Sbjct: 932 ELRDYQLEGFRWLARLARWGAGACLADDMGLGKTLQALAVILTRASEGPTLAIAPTSVCL 991
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK- 288
+W + +++ P I+ QLG +R R P D L + SY ++ +
Sbjct: 992 NWISEAERF--APTLNII----QLGTGDRQALL------DRLQPFDLL--VCSYGLLQQE 1037
Query: 289 -LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFK 347
+ +L ++ ++ DE+ +KN KR+ A + + + + L+ +GTP + EL+
Sbjct: 1038 EVATMLAGVEWQTIVLDEAQAIKNFSTKRSKAAMNL--RGDFKLITTGTPIENHLGELWN 1095
Query: 348 QLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLP 407
+ P + ++ + R+ Y + E+L L++ ++RR K VLA+LP
Sbjct: 1096 LFRFINPGLLGSLESFDRRFATP--IEKYGDKTAREQLKKLVRP-FLLRRTKNQVLAELP 1152
Query: 408 VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL----KFTEKNLINKI 463
+ V ++++ ++ AL R + + + +Q L K ++
Sbjct: 1153 PRTEILVPIELSVEEKAFYEALRRRALEKLSESDSTAGAKHLQVLAEIMKLRRACCHPQL 1212
Query: 464 YT---DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
D A +K+ + L+ +++ K L+F+ L I ++++ +DG T
Sbjct: 1213 VAPDLDLAGSKLSRFGEILDDLLDNQHKALVFSQFVDHLAIIRSYLDQRQIKYQYLDGST 1272
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P + RQ V FQ + ++S+KAGG GL LTAA VI + W P QA DRAH
Sbjct: 1273 PASDRQKQVKAFQAGEG-DVFLISLKAGGTGLNLTAADYVIHLDPWWNPAVEDQASDRAH 1331
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
RIGQ V +Y L+A DT+++ + D+ K + +L+G + S ++S+ ++
Sbjct: 1332 RIGQKRPVTIYRLVAKDTIEEKIVDLHHHKRDLADSLLEGTDASGKLSTDEL 1383
>gi|320582108|gb|EFW96326.1| chromatin remodelling complex ATPase chain ISW1 [Ogataea
parapolymorpha DL-1]
Length = 1033
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 221/483 (45%), Gaps = 55/483 (11%)
Query: 162 KYDQIPAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDV-- 216
++ + P++I KL P+Q G+ + + Q+ +LADEMGLGKT+Q IA R +
Sbjct: 132 EFTESPSYINGKLRPYQIQGLNWLISLNQNNLSGILADEMGLGKTLQTIAFLGYLRYIKG 191
Query: 217 --WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P S +W +W P E +V L G + I+
Sbjct: 192 IAGPHLVIVPKSTLENWQREFTKW--TPEVETLV----LTGDQQQRNEIIK--------- 236
Query: 275 DGL----FNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKK-- 326
DGL F+++ SY++V++ + L ++ ++ DE+H LKN + + II+
Sbjct: 237 DGLMTCKFDVVISSYEIVIREKTALKKFAWEYIVVDEAHRLKNEDSLLSQ----IIRTFH 292
Query: 327 AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELH 386
++ LL++GTP + EL+ L L PDV+ + + + + G + N +LH
Sbjct: 293 SRNRLLITGTPLQNNLHELWALLNFLLPDVFADSETFDDWFSSGDSENKDETIVN--QLH 350
Query: 387 NLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF-RELEVVKGKIKACKS 445
+++ ++RR+K DV L K+ V++ + E + L R+++ V G +S
Sbjct: 351 KVLQP-FLLRRIKSDVEKNLLPKKELNVYVGMTEMQKKWYQKLLERDIDAVNGANGKRES 409
Query: 446 EEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKF 489
+ + ++ + N Y + AE P D L+ E G +
Sbjct: 410 KTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIYNSQKMKVLDKMLKRFKEQGSRV 469
Query: 490 LIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAG 548
LIF+ MLD + + RIDG T R + E+ D K +L+ +AG
Sbjct: 470 LIFSQMSRMLDILEDYCSFRGFEYCRIDGQTDHVDRIRAIDEYSAPDSKKFVFLLTTRAG 529
Query: 549 GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVR 608
G+G+ LT+A V + W P +QA DRAHRIGQ V V+ + +++ V +
Sbjct: 530 GLGINLTSADIVFLYDSDWNPQADLQAMDRAHRIGQTKQVKVFRFVTQKAIEEKVLERAS 589
Query: 609 SKL 611
KL
Sbjct: 590 QKL 592
>gi|409386892|ref|ZP_11239230.1| SWF/SNF family helicase [Lactococcus raffinolactis 4877]
gi|399205880|emb|CCK20145.1| SWF/SNF family helicase [Lactococcus raffinolactis 4877]
Length = 1037
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 138/488 (28%), Positives = 237/488 (48%), Gaps = 55/488 (11%)
Query: 165 QIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIA-VATCFRDVWP 218
Q P I+ L P+Q DGVR+ + GG +LAD+MGLGKT+Q+I +A+
Sbjct: 583 QKPEQIKVILRPYQEDGVRWMNMLSSYHMGG--VLADDMGLGKTLQSITYLASNLAQGDV 640
Query: 219 VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
LI++PSSL +W++ ++ P E+VVV G+ T++S N K I
Sbjct: 641 ALIVSPSSLIYNWSSEFAKF--APDLEVVVV----DGTKHERSTLIS-NPKTQI------ 687
Query: 279 NIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPA 338
I SY LK N + ++ DE+ +KN +K A + K + LSGTP
Sbjct: 688 FITSYGSFLKDVNTYQALELNYLLIDEAQTVKNFNSKTNKALSQL--KVDHTFALSGTPI 745
Query: 339 LSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRL 398
+R E++ + + P + + ++ R K H+ + +++ VM RR
Sbjct: 746 ENRVDEIWAIFQIIMPGILGDRKKF--RKLK------------HDAISRMIQPFVM-RRR 790
Query: 399 KKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACK----SEEEVQSLKF 454
K+DVL +LP K + ++ E+ + IY +LE ++ +++ S +++ L
Sbjct: 791 KEDVLLELPDKLEMIQYSEL-EESQKIIY--LAQLEAIQNRVRNMNDYEFSRSKIEILAG 847
Query: 455 TEK--------NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLF 506
+ L YT ++ K+ ++ + L+ + +AG + LIF+ + M I +
Sbjct: 848 ITRLRQICDTPALFMPDYTGTS-GKLKSLAELLQQIKDAGHRPLIFSQFRKMFPHIERQL 906
Query: 507 LKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELS 566
+ + ++ G TP R +V F + A ++S+KAGG GL LT+A VI +L
Sbjct: 907 EEVGISSYQLTGSTPIKDRMKMVKAFNDGSR-DAFLISLKAGGTGLNLTSADVVILIDLW 965
Query: 567 WTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
W P QA RAHR+GQ +V V L+ T+++ + + SK + + VLDG +
Sbjct: 966 WNPSVEEQAISRAHRMGQTKTVEVIRLITRGTIEEKIMALQDSKRDMVSTVLDGGADDST 1025
Query: 627 VSSSQIRS 634
+S +++S
Sbjct: 1026 ISKDEMKS 1033
>gi|237794935|ref|YP_002862487.1| helicase, Snf2 family [Clostridium botulinum Ba4 str. 657]
gi|229261620|gb|ACQ52653.1| helicase, Snf2 family [Clostridium botulinum Ba4 str. 657]
Length = 1097
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 140/513 (27%), Positives = 248/513 (48%), Gaps = 62/513 (12%)
Query: 153 ASAAPDLREKYDQIPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAI 207
+S ++ + Y ++P + + L +Q G R+ ++ GG +LADEMGLGKTIQ I
Sbjct: 626 SSRITNINDDYYEVPKKLNATLREYQIAGYRWMKILSNMKFGG--ILADEMGLGKTIQTI 683
Query: 208 AVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSN 267
+ + LI+TP+SL +W Q++ +E + ++G I S
Sbjct: 684 SFLLSEKGTRS-LIVTPTSLIYNWQDEFQKF-----AETL----KIG-------VIHGSK 726
Query: 268 TKRNIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAAT 320
+R LDG YDV+L L + F I DE +KN A+ T +
Sbjct: 727 EERMKVLDGR---EEYDVLLTTYGTLKNDIQLYKDITFDYCIIDEGQNIKNPLAQSTDSV 783
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGAS 380
I K ++AL +GTP + +EL+ + + P + + ++ I +
Sbjct: 784 KRINSKVRFAL--TGTPIENNLMELWSIFDFIMPGYLYSEERFQEKF-------IDEVEE 834
Query: 381 NHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKI 440
N ++L L++ ++ RR KKDVL LP K ++ +++ R IY + ++ +K K+
Sbjct: 835 NIDKLKTLIRPFIL-RREKKDVLKDLPHKIEKKFLVEMTTNQER-IYKAY--MKSIKEKL 890
Query: 441 KACKSEE--------EVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIF 492
K K ++ ++ L +I++ S++ +I ++ +E ++ G K L+F
Sbjct: 891 KNNKEDKITIFSYLTRLRQLCLDPSIIIDEYKGGSSKLRIA--MELVEEGVDEGKKILLF 948
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGL 552
+ +L I +L K+ + +DG T + R LV EF + VK ++S+KAGG GL
Sbjct: 949 SQFISVLKNISKLLEKEGIEYFYLDGSTNASERIKLVNEFNKNSHVKVFLISLKAGGTGL 1008
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
LT+A+ VI + W P QA DRAHRIGQ + V V L+ T+++ + + K E
Sbjct: 1009 NLTSANLVIHFDPWWNPAIEDQATDRAHRIGQKNLVQVIKLVCKGTIEEKIIMLQEDKKE 1068
Query: 613 NLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSF 645
+ V++ ++ + + ++ +K++ LD F
Sbjct: 1069 LINNVMNS-----DLKNEHLINTLSKEEILDLF 1096
>gi|168182529|ref|ZP_02617193.1| helicase, Snf2 family [Clostridium botulinum Bf]
gi|182674407|gb|EDT86368.1| helicase, Snf2 family [Clostridium botulinum Bf]
Length = 1097
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 140/513 (27%), Positives = 248/513 (48%), Gaps = 62/513 (12%)
Query: 153 ASAAPDLREKYDQIPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAI 207
+S ++ + Y ++P + + L +Q G R+ ++ GG +LADEMGLGKTIQ I
Sbjct: 626 SSRITNINDDYYEVPKKLNATLREYQIAGYRWMKILSNMKFGG--ILADEMGLGKTIQTI 683
Query: 208 AVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSN 267
+ + LI+TP+SL +W Q++ +E + ++G I S
Sbjct: 684 SFLLSEKGTRS-LIVTPTSLIYNWQDEFQKF-----AETL----KIG-------VIHGSK 726
Query: 268 TKRNIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAAT 320
+R LDG YDV+L L + F I DE +KN A+ T +
Sbjct: 727 EERMEVLDGR---EEYDVLLTTYGTLKNDIQLYKDITFDYCIIDEGQNIKNPLAQSTDSV 783
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGAS 380
I K ++AL +GTP + +EL+ + + P + + ++ I +
Sbjct: 784 KRINSKVRFAL--TGTPIENNLMELWSIFDFIMPGYLYSEERFQEKF-------IDEVEE 834
Query: 381 NHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKI 440
N ++L L++ ++ RR KKDVL LP K ++ +++ R IY + ++ +K K+
Sbjct: 835 NIDKLKTLIRPFIL-RREKKDVLKDLPHKIEKKFLVEMTTNQER-IYKAY--MKSIKEKL 890
Query: 441 KACKSEE--------EVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIF 492
K K ++ ++ L +I++ S++ +I ++ +E ++ G K L+F
Sbjct: 891 KNNKEDKITIFSYLTRLRQLCLDPSIIIDEYKGGSSKLRIA--MELVEEGVDEGKKILLF 948
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGL 552
+ +L I +L K+ + +DG T + R LV EF + VK ++S+KAGG GL
Sbjct: 949 SQFISVLKNISKLLEKEGIEYFYLDGSTNASERIKLVNEFNKNSHVKVFLISLKAGGTGL 1008
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
LT+A+ VI + W P QA DRAHRIGQ + V V L+ T+++ + + K E
Sbjct: 1009 NLTSANLVIHFDPWWNPAIEDQATDRAHRIGQKNLVQVIKLVCKGTIEEKIIMLQEDKKE 1068
Query: 613 NLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSF 645
+ V++ ++ + + ++ +K++ LD F
Sbjct: 1069 LINNVMNS-----DLKNEHLINTLSKEEILDLF 1096
>gi|358062596|ref|ZP_09149239.1| hypothetical protein HMPREF9473_01301 [Clostridium hathewayi
WAL-18680]
gi|356699220|gb|EHI60737.1| hypothetical protein HMPREF9473_01301 [Clostridium hathewayi
WAL-18680]
Length = 1054
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 159/560 (28%), Positives = 254/560 (45%), Gaps = 75/560 (13%)
Query: 103 IPKATWNAKE-RLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLRE 161
+ KA +K+ R+ + +L S K IS Y +NL + R I S + D
Sbjct: 526 VSKADLQSKKIRIPKYRAFYLDSLYKETGNISLYR---DNLFKSIVRGIKSVEDS-DF-- 579
Query: 162 KYDQIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIA-------- 208
++P + L +Q+ G R+ A GG +LAD+MGLGKT+Q I+
Sbjct: 580 ---EVPESLRPVLKGYQKTGFRWLRTLDACGFGG--ILADDMGLGKTVQVISLLLDEKQK 634
Query: 209 VATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNT 268
+ + LI+ P+SL +W + + P V ++ G S V
Sbjct: 635 MEAAGKKPGTSLIVCPASLVYNWEYEVHTF---APELNVEAITGFGWSREYRLQSVEE-- 689
Query: 269 KRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKK 326
+++I SY+++ + + + F+ I DE+ ++KN + A I +
Sbjct: 690 ---------YDVIITSYELLRRDIQLYENIEFRFQIIDEAQYIKNPTTQSAKAVKVIHSR 740
Query: 327 AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRY----CKGGVFGIYQGASNH 382
++AL +GTP +R EL+ + L P + ++ + K G N
Sbjct: 741 TRFAL--TGTPIENRLSELWSIFDYLMPGFLFSYQKFKKNFEAPIVKDG---------NS 789
Query: 383 EELHNLMKAT--VMIRRLKKDVLAQLPVKRRQQVF--LDVAEKDMRQIYA--LFRELEVV 436
E L NL + T ++RRLKKDVL +LP K V+ D +K++ A L RELE
Sbjct: 790 EVLWNLHQLTGPFILRRLKKDVLKELPDKLETIVYSRFDEVQKELYTANAVKLKRELE-- 847
Query: 437 KGKIKACKSEEEVQSL----KFTEKNLINKIYTDS---AEAKIPAVLDYLETVIEAGCKF 489
G+ +Q L K + K+Y ++ AK+ ++ L +EAG K
Sbjct: 848 -GQSDQEYGSGRMQVLAELTKLRQVCCDPKLYYENYRGTSAKLETCMELLNGAVEAGHKV 906
Query: 490 LIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGG 549
L+F+ MLD I + K KV + G T R +V +F E DDV ++S+KAGG
Sbjct: 907 LLFSQFTSMLDIIGKRLDKDKVKYHVLTGATSKEDRMRMVNQFHE-DDVPVFLISLKAGG 965
Query: 550 VGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRS 609
GL LTAA VI + W QA DR HRIGQ V+V+ L+ DT+++ + + +
Sbjct: 966 TGLNLTAADVVIHYDPWWNVAAQNQATDRTHRIGQEKQVSVFKLIMKDTIEESILKLQEA 1025
Query: 610 KLENLGQVLDGHENSLEVSS 629
K Q++ E ++ +SS
Sbjct: 1026 KKSLAEQIIT--EGTVSLSS 1043
>gi|375146815|ref|YP_005009256.1| SNF2-related protein [Niastella koreensis GR20-10]
gi|361060861|gb|AEV99852.1| SNF2-related protein [Niastella koreensis GR20-10]
Length = 954
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 137/471 (29%), Positives = 223/471 (47%), Gaps = 66/471 (14%)
Query: 165 QIPAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATC---FRDVWP 218
++PA I +KL P+Q+ G + L + G LAD+MGLGKT+Q I+V T +
Sbjct: 483 EVPAVINAKLRPYQQKGFEWMLLLAEAGAGACLADDMGLGKTLQTISVLTHQLHEKANQR 542
Query: 219 VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
LI+ PSSL +W+ +Q++ S V VL GG NR+ I + T D
Sbjct: 543 HLIVCPSSLIYNWSQELQKF-----SPHVKVLIYHGG-NRA---IQDAATG-----DYQV 588
Query: 279 NIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPA 338
I SY V + + + NF V+ DESH +KN A+ T A + ++ + + LSGTP
Sbjct: 589 IITSYGTVRQDIEEMCAINFGTVVLDESHNIKNPAAQITKAVERL--QSGFRVALSGTPV 646
Query: 339 LSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV--MIR 396
++ +L+ QL L P ++ + + Y +++ L + T ++R
Sbjct: 647 MNNTFDLYAQLNFLLPGIFGSREFFRREYADA-----IDQRRESDKIKTLQRITAPFVLR 701
Query: 397 RLKKDVLAQLPVKR-----------------------RQQVFLDVAEKDMRQIYALFREL 433
R K+ V + LP K RQ VFL++ ++ + + +L
Sbjct: 702 RTKEQVASDLPAKTEMVMWCEMSMAQKRLYDEIKDSIRQSVFLNIEQEGLNK-----SKL 756
Query: 434 EVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFA 493
V+KG +K + L E+ + + TD +++ L+ ++ K L+F+
Sbjct: 757 AVLKGMLKLRQICNSPLLLPSEEQTCNDSVKTD-------LLMNELQNNLK-DHKVLVFS 808
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVL-SMKAGGVGL 552
ML+ + + ++ + +DG TPP RQ LV +FQ ++ L S+KAG GL
Sbjct: 809 QFTSMLNLLAENCREQGIAYYHLDGSTPPEKRQELVNQFQAPNNTTNVFLISLKAGNAGL 868
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIV 603
LTAAS VI + W QA DR HRIGQ +V Y ++ DT+++ +
Sbjct: 869 NLTAASYVILFDPWWNTAVQQQAIDRTHRIGQTKNVFAYKMICKDTIEEKI 919
>gi|302673648|ref|XP_003026510.1| hypothetical protein SCHCODRAFT_258840 [Schizophyllum commune H4-8]
gi|300100193|gb|EFI91607.1| hypothetical protein SCHCODRAFT_258840 [Schizophyllum commune H4-8]
Length = 1361
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 222/466 (47%), Gaps = 58/466 (12%)
Query: 193 LLADEMGLGKTIQAIAVATCF----RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
+LADEMGLGKTIQ I++ T R P L++ P S +WA +W + V
Sbjct: 507 ILADEMGLGKTIQTISLITFLIEVKRQRGPYLVIVPLSTMTNWAGEFAKW-----APAVK 561
Query: 249 VLSQLGG-SNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESH 307
V+S G + R N+ + L +Y+ ++K + L + +I DE H
Sbjct: 562 VISYKGNPAQRRALQGELRNSNFQVLL------TTYEYIIKDRPHLSKLRWVHMIIDEGH 615
Query: 308 FLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEY---- 363
+KN Q+K + TL ++ Y L+L+GTP + EL+ L + P V+ +V +
Sbjct: 616 RMKNTQSK-LSQTLTTYYRSNYRLILTGTPLQNNLPELWSLLNFVLPKVFNSVKSFDEWF 674
Query: 364 GNRYCKGGVFGIYQGASNHEE-------LHNLMKATVMIRRLKKDVLAQLPVKRRQQVFL 416
+ G + N EE LH +++ ++RRLKKDV ++LP K+ + + +
Sbjct: 675 NTPFANAGTGDKIE--LNEEEALLIIRRLHKVLRP-FLLRRLKKDVESELPDKQEKVIKV 731
Query: 417 DVAEKDMRQIYALFRELEVV---KGK------IKACKSE--------------EEVQSLK 453
++ Q+Y ++ +++ KGK +K +E +EV+ +
Sbjct: 732 RMSAL-QSQLYKQMKKYKMIANGKGKGQSTGGVKGLSNELMQLRKICQHPFLFDEVEDVV 790
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHC 513
T + + KI S + ++ + + L + + LIF ++D +
Sbjct: 791 NTTQLIDEKIIRSSGKVELLSRI--LPKLFATDHRVLIFFQMTKVMDIMEDFLKMMGWKY 848
Query: 514 IRIDGGTPPASRQALVTEFQEKD-DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
+R+DGGT R + V F KD D++ +LS +AGG+GL L A TVI + W P
Sbjct: 849 LRLDGGTKTEERASYVQLFNAKDSDIRVFILSTRAGGLGLNLQTADTVIIFDSDWNPHAD 908
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
+QA+DRAHRIGQ +V + + +V++ ++ R KL+ G+V+
Sbjct: 909 LQAQDRAHRIGQTKAVLILRFITEKSVEEAMYQRARYKLDIDGKVI 954
>gi|187779742|ref|ZP_02996215.1| hypothetical protein CLOSPO_03338 [Clostridium sporogenes ATCC 15579]
gi|187773367|gb|EDU37169.1| SNF2 family N-terminal domain protein [Clostridium sporogenes ATCC
15579]
Length = 1081
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 246/500 (49%), Gaps = 48/500 (9%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAIAVATCF 213
+ + Y ++P ++ + L +Q G R+ ++ GG +LADEMGLGKTIQ I+
Sbjct: 616 INDGYYEVPKNLNATLREYQIAGYRWMKILSNMKFGG--ILADEMGLGKTIQTISFLLSE 673
Query: 214 RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
+ LI+TP+SL +W Q++ + + + GS ++ K ++
Sbjct: 674 KGA-KSLIVTPTSLIYNWQDEFQKFAK------TLKIGVIHGSKEERMKVLDDREKYDVL 726
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
L + + D L ++I+ F I DE +KN A+ T + I K ++AL
Sbjct: 727 L-TTYGTLKNDFQL-YKDII----FDYCIIDEGQNIKNPLAQNTDSVKRINSKVRFAL-- 778
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV 393
+GTP + +EL+ + + P + + ++ I + +N ++L L++ +
Sbjct: 779 TGTPIENNLMELWSIFDFIMPGYLYSEERFQEKF-------IDEVETNIDKLKTLIRPFI 831
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
+ RR KK+VL LP K ++ +++ R IY + ++ +K K+K K E+++
Sbjct: 832 L-RREKKNVLKDLPHKIEKKFLVEMTTNQER-IYKAY--MKSIKEKLKNNK-EDKITIFS 886
Query: 454 FTEK--------NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQL 505
+ + +LI Y +K+ ++ ++ ++ G K L+F+ +L I +L
Sbjct: 887 YLTRLRQLCLDPSLIIDEYK-GGSSKLRIAMELVQEGVDEGKKILLFSQFTSVLKNISKL 945
Query: 506 FLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAEL 565
K+ + +DG T + R LV EF + +VK ++S+KAGG GL LT+A+ VI +
Sbjct: 946 LEKEGIEYFYLDGSTNASERIKLVNEFNKNSNVKVFLISLKAGGTGLNLTSANLVIHFDP 1005
Query: 566 SWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSL 625
W P QA DRAHRIGQ + V V L+ T+++ + + K E + V++
Sbjct: 1006 WWNPAVEDQATDRAHRIGQKNLVQVIKLVCKGTIEEKIIMLQDDKKELINNVMNS----- 1060
Query: 626 EVSSSQIRSSPAKQKTLDSF 645
++ S + ++ +K++ LD F
Sbjct: 1061 DLKSGNLINTLSKEEILDLF 1080
>gi|336428236|ref|ZP_08608220.1| hypothetical protein HMPREF0994_04226 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336006472|gb|EGN36506.1| hypothetical protein HMPREF0994_04226 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 1097
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 139/486 (28%), Positives = 229/486 (47%), Gaps = 49/486 (10%)
Query: 165 QIPAHIESKLLPFQRDG---VRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW---- 217
+IP+ +++ L +Q+ G ++ +G +LAD+MGLGKT+Q IA W
Sbjct: 622 EIPSELDNILRGYQKQGFLWIKTLKANGFGGILADDMGLGKTLQVIAF---LLSEWKESG 678
Query: 218 -----PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNI 272
P LI+ P+SL +W + ++++ P+ V + V + K +
Sbjct: 679 ENPGRPWLIVCPASLVYNWKSELERF---APALPVYTAAGNVKEREELLKRVEAQGKGVV 735
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
I SYD++ + + +F + DE+ F+KN + + A + A + L
Sbjct: 736 -------ITSYDLLRRDILLYEKMSFACEVIDEAQFIKNHSTQASRAVKQV--SAGFRLA 786
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNH--EELHNLMK 390
L+GTP +R EL+ + L P + YG R+ + + G E LH +++
Sbjct: 787 LTGTPVENRLSELWSIFDFLMPGF---LFAYG-RFREELETPVVTGGDEEAAERLHRMIR 842
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEE 448
V+ RRLKKDVL LP K + + + V E + +Y + R L V+ + + + ++
Sbjct: 843 PFVL-RRLKKDVLTDLPDKIEKNM-VAVLEDEQSSLYDAHVQRLLAVLSKQTEQEFAGKQ 900
Query: 449 VQSLKFTEKNLINKIYTD---------SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
+Q L E + +I D AK+ L+ + E G K L+F+ ML
Sbjct: 901 IQVL--AELTKLRQICCDPGLLFEGYAGGSAKMQLCLELIRNAAEGGHKVLLFSQFTSML 958
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
+ + Q +K+ + +DG TP R LV F KD+ + +S+KAGG GL LTAA
Sbjct: 959 ERLKQELVKEDISFYALDGSTPKLKRLELVESFN-KDETQVFCISLKAGGTGLNLTAADI 1017
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
VI + W QA DRAHRIGQ + V VY L+A T+++ + + K E ++L
Sbjct: 1018 VIHFDPWWNVAVQNQATDRAHRIGQQNVVTVYKLIAKGTIEEKIVSLQEKKKELADKILG 1077
Query: 620 GHENSL 625
G E +
Sbjct: 1078 GEEMGM 1083
>gi|432909970|ref|XP_004078255.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Oryzias
latipes]
Length = 1882
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 227/500 (45%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQ-AIAVATCFR 214
K+D+ P +++S L P+Q +G+ RF+ +LADEMGLGKT+Q A+ + + ++
Sbjct: 648 KFDRQPEYLDSTGGTLHPYQLEGLNWLRFSWAQATDTILADEMGLGKTVQTAVFLYSLYK 707
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVV---------------LSQLGGS 256
+ P L+ P S ++W + W P VV S G +
Sbjct: 708 EGHSKGPFLVSAPLSTIINWEREFEMWA---PDMYVVTYVGDKDSRAVIRENEFSFEGNA 764
Query: 257 NRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
R G +S K++ P+ + SY+++ Q +L S + ++ DE+H LKN Q+K
Sbjct: 765 IRGGKK--ASKMKKDSPVKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKF 822
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + Q+ LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 823 FRLLNNYSL----QHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 872
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+++ M+RRLK DV +P K ++ + V M++ Y F R
Sbjct: 873 DIAKEDQIKKLHDML-GPHMLRRLKADVFKHMPSK--TELIVRVELSPMQKKYYKFILTR 929
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEK-NLINKIYTDSAEAKIPAVL 476
E + + +K C + + TE L N +Y +A K L
Sbjct: 930 NFEALNTRGGGNQVSLLNVVMDLKKCCNHPYLFPAAATEAPKLPNGMYEGAALTKASGKL 989
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ E G + L+F+ MLD + + RIDGG RQ + F
Sbjct: 990 MLLQKMMKKLKEGGHRVLVFSQMTKMLDLLEDFLENEGYKYERIDGGVTGNMRQEAIDRF 1049
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ A +LS +AGG+G+ L +A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1050 NAPGAQQFAFLLSTRAGGLGINLASADTVIIYDSDWNPHNDIQAFSRAHRIGQNRKVMIY 1109
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1110 RFVTKASVEERITQVAKKKM 1129
>gi|425442029|ref|ZP_18822289.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC 9717]
gi|389717080|emb|CCH98764.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC 9717]
Length = 1390
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 137/532 (25%), Positives = 249/532 (46%), Gaps = 43/532 (8%)
Query: 113 RLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIES 172
R F P LS + + ++ +NL QR S P ++P+ +++
Sbjct: 883 RFHPFAAPMLSELSEEVGQLKADKRWRDNL----QRFQESQDFTP-------EVPSTLQA 931
Query: 173 KLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+L +Q +G R+ + G LAD+MGLGKT+QA+AV P L + P+S+ L
Sbjct: 932 ELRDYQLEGFRWLARLARWGAGACLADDMGLGKTLQALAVILTRASEGPTLAIAPTSVCL 991
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK- 288
+W + +++ P I+ QLG +R R P D L + SY ++ +
Sbjct: 992 NWISEAERF--APTLNII----QLGTGDRQALL------DRLQPFDLL--VCSYGLLQQE 1037
Query: 289 -LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFK 347
+ +L ++ ++ DE+ +KN KR+ A + + + + L+ +GTP + EL+
Sbjct: 1038 EVATMLAGVEWRTIVLDEAQAIKNFSTKRSKAAMNL--RGDFKLITTGTPIENHLGELWN 1095
Query: 348 QLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLP 407
+ P + ++ + R+ Y + E+L L++ ++RR K VLA+LP
Sbjct: 1096 LFRFINPGLLGSLESFDRRFATP--IEKYGDKTAREQLKKLVRP-FLLRRTKNQVLAELP 1152
Query: 408 VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL----KFTEKNLINKI 463
+ V ++++ ++ AL R + + + +Q L K ++
Sbjct: 1153 PRTEILVPIELSVEEKAFYEALRRRALEKLSESDSTAGAKHLQVLAEIMKLRRACCHPQL 1212
Query: 464 YT---DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
D A +K+ + L+ +++ K L+F+ L + ++++ +DG T
Sbjct: 1213 VAPDLDLAGSKLSRFGEILDDLLDNQHKALVFSQFVDHLAIVRSYLEQRQIKYQYLDGST 1272
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P RQ V FQ + ++S+KAGG GL LTAA VI + W P QA DRAH
Sbjct: 1273 PAGDRQKQVKAFQAGEG-DVFLISLKAGGTGLNLTAADYVIHLDPWWNPAVEDQASDRAH 1331
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
RIGQ V +Y L+A DT+++ + D+ K + +L+G + S ++S+ ++
Sbjct: 1332 RIGQKRPVTIYRLVAKDTIEEKIVDLHHHKRDLADSLLEGTDASGKLSTDEL 1383
>gi|420150041|ref|ZP_14657203.1| SNF2 family N-terminal domain protein [Capnocytophaga sp. oral
taxon 335 str. F0486]
gi|394752579|gb|EJF36259.1| SNF2 family N-terminal domain protein [Capnocytophaga sp. oral
taxon 335 str. F0486]
Length = 950
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 230/500 (46%), Gaps = 65/500 (13%)
Query: 158 DLREKYDQIPA-HIESKLLPFQRDGVRFALQH---GGRILLADEMGLGKTIQAIAVATCF 213
+L EK + P+ ++ + L P+Q +GV + LQH G LAD+MGLGKT+Q IA+
Sbjct: 461 NLVEKVNYTPSPNLRATLRPYQIEGVEWLLQHYYNGVGACLADDMGLGKTLQTIALLVAI 520
Query: 214 RDVWP---------------------VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQ 252
D P VL++ PSSL +W +++ P +Q
Sbjct: 521 HDALPKKAIETADLFSGIEKSKEALKVLVILPSSLIFNWYDETKRF---APH---FKCTQ 574
Query: 253 LGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA 312
G++R KR D +F SY +V + + F+ +I DES +KN
Sbjct: 575 YVGTDRK------VKAKRLGNYDVVFT--SYPIVERDVELFQKYEFRYIILDESQRIKNK 626
Query: 313 QAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV 372
+K A + KA + + LSGTP + +L+ Q++ + P++ K+ Y + Y V
Sbjct: 627 NSKTFKAIHTL--KATHRIALSGTPIENSLSDLWSQMQFINPNILKS---YASFYKNYEV 681
Query: 373 -FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFR 431
+ A EEL ++ + ++RR K+ VL LP Q ++ ++E A +
Sbjct: 682 EISKKKNAQALEELKTII-SPFLLRRTKEQVLDDLPEMEEQIIYCPMSE-------AQHK 733
Query: 432 ELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDS------------AEAKIPAVLDYL 479
E K K++ + +F N++ ++ S A K V++Y+
Sbjct: 734 WYETEKSKVRNQLLQINEPITEFNTLNMLMRLRKISLHPKLVDKESKIASGKYEEVINYM 793
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
E ++++ K LIF+ L + KK + ++ G TP R+ V FQ +
Sbjct: 794 EELLQSSRKALIFSSFVSHLALYEEWCNKKGIKYAKLTGETPSFERKNQVEMFQNNPSIS 853
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+S+KAG VGL LT AS V+ + W P QA RAHRIGQ + VNV ++ DT+
Sbjct: 854 FFFISLKAGEVGLNLTQASYVLLLDPWWNPFSEKQAIGRAHRIGQQNKVNVIRFVSKDTI 913
Query: 600 DDIVWDVVRSKLENLGQVLD 619
++ + + +SK E ++D
Sbjct: 914 EEKIIKLQKSKRELSENIID 933
>gi|295100101|emb|CBK89190.1| Superfamily II DNA/RNA helicases, SNF2 family [Eubacterium
cylindroides T2-87]
Length = 473
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 229/488 (46%), Gaps = 47/488 (9%)
Query: 174 LLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDVWPV-LILTPSSLRL 229
L P+Q+ G R+ L + +LADEMGLGKT+Q IA+ RD L++ P+SL
Sbjct: 15 LRPYQKVGTRWLLTLYSYNLNGILADEMGLGKTLQVIAMLDSIRDKNKTSLVVCPASLIY 74
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKL 289
+W I ++ S+ + +S G + I + D I SYD + +
Sbjct: 75 NWEDEIAKF-----SKTLNCISITGAKAKRTLGIQNYR-------DYDLLITSYDYLRRD 122
Query: 290 QNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQL 349
++ F+ +I DE+ +KN + K + KA + + LSGTP + EL+
Sbjct: 123 VDLYQDHEFECIILDEAQNIKNQKTKNAQFVKSL--KANHRIALSGTPIENSLAELWSIF 180
Query: 350 EALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVK 409
+ L P + H + Y + + + L NL+ ++ RR KK+VL +LP K
Sbjct: 181 DFLMPGYLYSYHYFKQEY--EIPITLDEDEKTTKRLRNLVNPFIL-RRTKKEVLKELPDK 237
Query: 410 RRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSE---EEVQSLKFTEKNLINKIYTD 466
+ L+ + + +++Y L +V +++A E + + L K + +I D
Sbjct: 238 VDHKYMLEFSASE-KKLY--LANLAMVNKEMQAKMKEVHFDRIAILAMLTK--LRQICCD 292
Query: 467 SA---------EAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRID 517
+ KI A + ++T+ E K L+F+ +LD + K+++ +
Sbjct: 293 ARLVYDNIKEPSTKINATISLIKTLTENNKKILLFSAFTSLLDLVSNQLDKEQISYYMLT 352
Query: 518 GGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
G T R+ LV F E DD + ++S+KAGG GL LT+A VI + W QA D
Sbjct: 353 GSTNKEERRKLVNNFNE-DDTRVFLISLKAGGTGLNLTSAEAVIHIDPWWNLSAQNQATD 411
Query: 578 RAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPA 637
RAHRIGQ ++V VY ++ D++++ + + K ++G++ SL S +
Sbjct: 412 RAHRIGQNANVQVYRMIMKDSIEEKILKMQERKANLADSFVEGNDGSL--------SKMS 463
Query: 638 KQKTLDSF 645
K++ LD F
Sbjct: 464 KEEILDLF 471
>gi|425453492|ref|ZP_18833249.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC 9807]
gi|389803157|emb|CCI17880.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC 9807]
Length = 1390
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 137/532 (25%), Positives = 250/532 (46%), Gaps = 43/532 (8%)
Query: 113 RLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIES 172
R F P LS + + ++ +NL QR S P ++P+ +++
Sbjct: 883 RFHPFAAPMLSELTEEVGQLKADKRWRDNL----QRFQESQDFTP-------EVPSTLQA 931
Query: 173 KLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+L +Q +G R+ + G LAD+MGLGKT+QA+AV P L + P+S+ L
Sbjct: 932 ELRDYQLEGFRWLARLARWGAGACLADDMGLGKTLQALAVILTRASEGPTLAIAPTSVCL 991
Query: 230 HWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK- 288
+W + +++ P I+ QLG +R R P D L + SY ++ +
Sbjct: 992 NWISEAERF--APTLNII----QLGTGDRQALL------DRLQPFDLL--VCSYGLLQQE 1037
Query: 289 -LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFK 347
+ +L ++ ++ DE+ +KN KR+ A + + + + L+ +GTP + EL+
Sbjct: 1038 EVATMLAGVEWRTIVLDEAQAIKNFSTKRSKAAMNL--RGDFKLITTGTPIENHLGELWN 1095
Query: 348 QLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLP 407
+ P + ++ + R+ Y + E+L L++ ++RR K VLA+LP
Sbjct: 1096 LFRFINPGLLGSLESFDRRFAT--PIEKYGDKTAREQLKKLVRP-FLLRRTKNQVLAELP 1152
Query: 408 VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL----KFTEKNLINKI 463
+ V ++++ ++ AL R + + + +Q L K ++
Sbjct: 1153 PRTEILVPIELSVEEKAFYEALRRRALEKLSESDSTAGAKHLQVLAEIMKLRRACCHPQL 1212
Query: 464 YT---DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
D A +K+ + L+ +++ K L+F+ L + ++++ +DG T
Sbjct: 1213 VAPDLDLAGSKLSRFGEILDDLLDNQHKALVFSQFVDHLAIVRSYLDQRQIKYQYLDGST 1272
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P + RQ V FQ + ++S+KAGG GL LTAA VI + W P QA DRAH
Sbjct: 1273 PASDRQKQVKAFQAGEG-DVFLISLKAGGTGLNLTAADYVIHLDPWWNPAVEDQASDRAH 1331
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
RIGQ V +Y L+A DT+++ + D+ K + +L+G + S ++S+ ++
Sbjct: 1332 RIGQKRPVTIYRLVAKDTIEEKIVDLHHHKRDLADSLLEGTDASGKLSTDEL 1383
>gi|26335537|dbj|BAC31469.1| unnamed protein product [Mus musculus]
Length = 263
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 118/183 (64%), Gaps = 4/183 (2%)
Query: 463 IYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
+ +AEAKIP V++Y+ ++++G +FL+FAHH+ +LDA+ + +K V IRIDG TP
Sbjct: 12 FFNRTAEAKIPCVVEYILDLLDSGRERFLVFAHHKVILDAVAKELERKNVQHIRIDGSTP 71
Query: 522 PASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHR 581
A R+A FQ A+LS+ A +GLT + A V+FAEL W PG LIQAEDR HR
Sbjct: 72 SADREAQCQRFQLSKGHTVALLSITAANMGLTFSTADLVVFAELFWNPGVLIQAEDRVHR 131
Query: 582 IGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS--SSQIRSSPAKQ 639
IGQ +SV+++YL+A T DD +W +++ K++ LG+ N E++ + + P KQ
Sbjct: 132 IGQTNSVSIHYLVAKGTADDYLWPLIQEKIKVLGEAGLSETNFSEMTEATDYVHKDP-KQ 190
Query: 640 KTL 642
KT+
Sbjct: 191 KTI 193
>gi|338529892|ref|YP_004663226.1| SNF2/helicase domain-containing protein [Myxococcus fulvus HW-1]
gi|337255988|gb|AEI62148.1| SNF2/helicase domain-containing protein [Myxococcus fulvus HW-1]
Length = 1181
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 141/515 (27%), Positives = 248/515 (48%), Gaps = 43/515 (8%)
Query: 133 SGYNVEIE-NLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQ---H 188
+G +VE + LV+R A+ P ++PA +++ L +Q++G R+ +
Sbjct: 674 AGADVEADKTWQSLVERIFAAKELKP-------RVPAGLKTALRDYQQEGFRWLTRLASW 726
Query: 189 GGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
G +LAD+MGLGKT+QA+ V + P L+L P+S+ +W +++ PS +
Sbjct: 727 GAGGVLADDMGLGKTVQALTVLLDRSKLGPALVLAPTSVAFNW---MEEAKRFAPSLRMT 783
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHF 308
+ S++ ++ +R P D L ++SY ++ + L F +I DE+
Sbjct: 784 LFSEVADRGQT--------LERLGPKDVL--VMSYGLLTRDIERLSKLRFSTIIFDEAQT 833
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
LKNA R A + + + LSGTP + EL+ ++P + + + +R+
Sbjct: 834 LKNATTHRFRAARAL--QGDFKFALSGTPLENHLGELWSLFAVVFPGLLGSWEAFRSRFA 891
Query: 369 KGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKR--RQQVFLDVAE----KD 422
G+ A+ L +++ ++RR K V AQLP + R + L E +D
Sbjct: 892 APIERGVDPTAAP--ALARVLQ-PFLLRRTKAQVEAQLPPRTDIRVPIVLSSEEWALYED 948
Query: 423 MRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLIN--KIYTDSAEAKIPAVLDYLE 480
R A +LE K K+K + E+ + + L + ++Y ++ + + ++E
Sbjct: 949 AR--LAALSDLETRKPKLKEQERRIEILAALTRLRLLASHPRLYDAGSKLESAKLERFME 1006
Query: 481 TVIE---AGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD 537
V E G + L+F+ L + ++ + + +DG TP +R V FQE D
Sbjct: 1007 LVRELRAEGHRALVFSQFTSHLALVREVLDAEGIDYEYLDGQTPAGARAERVRAFQE-GD 1065
Query: 538 VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAND 597
V ++S+KAGG GL LTAA+TVI + W P QA DRAHRIGQ V VY L+
Sbjct: 1066 VPLFLISLKAGGFGLNLTAATTVIHLDPWWNPAVEDQASDRAHRIGQERPVTVYRLVTRG 1125
Query: 598 TVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
T+++ + + K + VL+G + + +S+ ++
Sbjct: 1126 TIEEQMLSLHEHKRALVAGVLEGKDAAGRLSTHEL 1160
>gi|451946092|ref|YP_007466687.1| DNA/RNA helicase, superfamily II, SNF2 family [Desulfocapsa
sulfexigens DSM 10523]
gi|451905440|gb|AGF77034.1| DNA/RNA helicase, superfamily II, SNF2 family [Desulfocapsa
sulfexigens DSM 10523]
Length = 1390
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 235/484 (48%), Gaps = 43/484 (8%)
Query: 165 QIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
Q+P+ + ++L +Q +G + L H G LAD+MGLGKT+QA+ P L+
Sbjct: 927 QLPSTLRAELRDYQHEGYNWLSRLAHWGVGGCLADDMGLGKTVQALTAMLSLATEGPSLV 986
Query: 222 LTPSSLRLHWAAMIQQW---LNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
+ P+S+ +W + ++ LNI T+ N + I G F
Sbjct: 987 VAPTSVSNNWQSEANRFTPTLNIK-------------------TLTGKNREETIAELGKF 1027
Query: 279 NII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
+I+ +Y ++ + ++L + ++ VI DE+ +KNA KR+ A + + +A++ L+ +GT
Sbjct: 1028 DILITTYTLLQQENDLLSAVKWQTVILDEAQAIKNAATKRSKAAMAL--QARFKLITTGT 1085
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIR 396
P + EL+ + P + +++ + R+ Y +L L++ ++ R
Sbjct: 1086 PVENHLGELWNLFHFINPGLLGSLNRFNERFAIP--IERYHNRDARLKLKKLIRPFIL-R 1142
Query: 397 RLKKDVLAQLPVKRRQQVFLDV-AEKDMRQIYALFRE--LEVVKG----KIKACKSEEEV 449
R+K VL +LP R ++ LDV +D + Y R+ LEV++ K + + E+
Sbjct: 1143 RIKSQVLEELPP--RTEITLDVEMSEDEQHFYEALRQNALEVLENNREKKSRHLQILTEI 1200
Query: 450 QSLKFTEKN-LINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLK 508
L+ N + T AK+ ++ ++ G K LIF+ L + +
Sbjct: 1201 MKLRQACCNPRLIAADTSIGSAKLEVFASVVDELLSGGHKALIFSQFIGHLTILREHLDA 1260
Query: 509 KKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWT 568
K ++ +DG T R+ V FQ + ++S+KAGG+GL LTAA VI + W
Sbjct: 1261 KGINYRYLDGSTSSPKRKQEVERFQAGEG-DLFLISLKAGGLGLNLTAADYVIHMDPWWN 1319
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
P QA DRAHRIGQ V +Y L+ +T+++ + + + K + G +L+G + S +++
Sbjct: 1320 PAVEDQASDRAHRIGQKRPVTIYRLVCKNTIEEKIVKLHQEKRDLAGSLLEGSDMSAKMT 1379
Query: 629 SSQI 632
S +
Sbjct: 1380 SEDL 1383
>gi|168057891|ref|XP_001780945.1| SNF2 family chromodomain-helicase [Physcomitrella patens subsp.
patens]
gi|162667579|gb|EDQ54205.1| SNF2 family chromodomain-helicase [Physcomitrella patens subsp.
patens]
Length = 1677
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 145/525 (27%), Positives = 237/525 (45%), Gaps = 80/525 (15%)
Query: 173 KLLPFQRDGVRFALQHGGR----ILLADEMGLGKTIQAIAVATCFRD----VWPVLILTP 224
+L +Q GV + L H + +LADEMGLGKTIQ++A+ R P L++ P
Sbjct: 540 RLRDYQEAGVAW-LDHNFKNRTNCILADEMGLGKTIQSVAMLENLRTKRKIRGPFLVVAP 598
Query: 225 SSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL---DG----- 276
S HW ++ ++ VV + N+ I+ RN DG
Sbjct: 599 VSTLGHWRREVESATDMN----CVVYT----GNQEDRQII-----RNYEFYYGDGNSSEL 645
Query: 277 LFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
FNI+ S+++++K QN L ++ +I DE+H LK+ ++K A + + LLL+
Sbjct: 646 KFNILLTSFEILMKDQNKLARETWQYIIVDEAHRLKSRESKTAQALRQLRVRHGGLLLLT 705
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVM 394
GTP + ELF L L + + + ++ +Y G + A ++L + + +
Sbjct: 706 GTPVQNNTKELFSLLYLLDRNEFDSEEDFLLKY------GDIKAAEQIKDLQDNILRPRL 759
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV---VKGKIKA--------- 442
+RR+K+DV +P+K + K+ R Y E + +KG I
Sbjct: 760 LRRMKEDVEKSIPMKEEVTIVWVELTKEQRAFYRAIYENNISTLLKGSIATNMPSLRNVA 819
Query: 443 ------------CKSEEEVQSLKFTEKNLINKIYTDSAE-------AKIPAVLDYLETVI 483
C EE S+ F ++L + ++ AE K+ V L +
Sbjct: 820 MELRKLCNHPFLCDGLEE--SIVFKHRSLNDGNASNLAETLLSQSSGKMVLVDKLLPKLK 877
Query: 484 EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD-DVKAAV 542
EAG + LIF+ MLD + L K RIDG + RQA + + KD + +
Sbjct: 878 EAGRRVLIFSQFTMMLDLLEDYLLSKGYSYERIDGKIRGSDRQAAIDRYSAKDSSIFVFL 937
Query: 543 LSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDI 602
LS +AGG+G+TLTAA T I + W P + +QA R HRIGQ V +Y L+ +T +
Sbjct: 938 LSTRAGGLGITLTAADTCIIYDSDWNPQNDLQAMARCHRIGQTKDVKIYRLITRNTYEQR 997
Query: 603 VWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLK 647
+++ K L + + G+ ++V+ K ++S LK
Sbjct: 998 LFECSSRKY-GLDEAILGNRMGVDVTQDH-------NKNIESLLK 1034
>gi|358465439|ref|ZP_09175386.1| protein, SNF2 family [Streptococcus sp. oral taxon 058 str. F0407]
gi|357065612|gb|EHI75796.1| protein, SNF2 family [Streptococcus sp. oral taxon 058 str. F0407]
Length = 1031
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 223/479 (46%), Gaps = 48/479 (10%)
Query: 169 HIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATC-FRDVWPVLILTP 224
+++ L +Q GVR+ L H G +LAD+MGLGKT+Q IA T + VLIL P
Sbjct: 577 QVQASLRDYQEKGVRWLQMLHHYGFGGILADDMGLGKTLQTIAFLTSQVTEDSRVLILAP 636
Query: 225 SSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
S L +WA +++ P ++ VV +NR ++S N + + SY
Sbjct: 637 SGLIYNWADEFRRF--APQLDLAVVHGL--KANRE--VVLSQNHQ--------IYVTSYA 682
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
+ ++ +F + DE+ +KNA K + + A +AL SGTP + E
Sbjct: 683 SFRQDSDLYQEMSFDFLFLDEAQVMKNAHTKIAQSLRQFVVPAVFAL--SGTPIENHLGE 740
Query: 345 LFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLA 404
L+ + + P + N E+ E++ +K VM RR K++VL
Sbjct: 741 LWSIFQIVLPGLLPNKIEFMKLPA--------------EQVAQFIKPFVM-RRKKEEVLT 785
Query: 405 QLP----------VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKF 454
+LP ++ +Q+ + MR A + E + +++ ++ +
Sbjct: 786 ELPDLIEVVYKNELEDQQKAIYLAQLQQMRDRLAQVTDQEFQRSRVEILSGLMRLRQICD 845
Query: 455 TEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
T + A K+ ++ D L V + G + LIF+ + ML+ I Q ++
Sbjct: 846 TPALFMEDY--QGASGKLDSLRDLLLQVADGGHRVLIFSQFKGMLEKIEQELPDLGLNSF 903
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
+I G TP RQ + F + + A ++S+KAGGVGL LT A TVI +L W P Q
Sbjct: 904 KITGSTPAHDRQEMTKAFNQGER-DAFLISLKAGGVGLNLTGADTVILVDLWWNPAVEAQ 962
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIR 633
A RAHR+GQ V VY L+ T+++ + ++ K + QVLDG E+ +S ++IR
Sbjct: 963 AIGRAHRMGQEQMVEVYRLITKGTIEEKIQELQEQKKHLVSQVLDGTESRASLSLAEIR 1021
>gi|417935385|ref|ZP_12578704.1| bacterial SNF2 helicase associated [Streptococcus mitis bv. 2 str.
F0392]
gi|340769878|gb|EGR92396.1| bacterial SNF2 helicase associated [Streptococcus mitis bv. 2 str.
F0392]
Length = 1031
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 138/480 (28%), Positives = 224/480 (46%), Gaps = 50/480 (10%)
Query: 169 HIESKLLPFQRDGVRFA---LQHGGRILLADEMGLGKTIQAIAVATC-FRDVWPVLILTP 224
+++ L +Q GVR+ ++G +LAD+MGLGKT+Q IA T + VLIL P
Sbjct: 577 QVQASLRDYQEKGVRWLQMLYRYGFGGILADDMGLGKTLQTIAFLTSQVTEDSRVLILAP 636
Query: 225 SSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
S L +WA ++ P V V+ L +NR I+S N + + SY
Sbjct: 637 SGLIYNWA---DEFRKFAPQLDVAVVHGLK-ANREA--ILSENHQ--------IYVTSYA 682
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
+ + +F + DE+ +KNAQ K + + A +AL SGTP + E
Sbjct: 683 TFRQDSELYQEMSFDFLFLDEAQVMKNAQTKIAQSLRQFVVPAVFAL--SGTPIENHLGE 740
Query: 345 LFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLA 404
L+ + + P + N E+ E + +K VM RR K++VL
Sbjct: 741 LWSIFQIVLPGLLPNKKEFMKLPA--------------ERVAQFIKPFVM-RRKKEEVLT 785
Query: 405 QLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE------EVQSLKFTEKN 458
+LP + V+ + E + IY +L+ ++ ++ +E E+ S +
Sbjct: 786 ELP-DLIEVVYKNELEDQQKAIY--LAQLQQMRDRLAQVTDKEFQRSRVEILSGLMRLRQ 842
Query: 459 LINK--IYTD---SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHC 513
+ + ++ D A K+ ++ D L V G + LIF+ + ML+ I Q +
Sbjct: 843 ICDTPALFMDDYQGASGKLDSLRDLLLQVAAGGHRVLIFSQFKGMLEKIEQELPDLGLTS 902
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
+I G TP RQ + F + + ++S+KAGGVGL LT A TVI +L W P
Sbjct: 903 FKITGSTPAQDRQEMTKAFNQGER-DTFLISLKAGGVGLNLTGADTVILVDLWWNPAVEA 961
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIR 633
QA RAHR+GQ V VY L+ T+++ + ++ K + QVLDG E+ ++ ++IR
Sbjct: 962 QAIGRAHRMGQEQMVEVYRLITKGTIEEKIQELQEQKKHLVSQVLDGTESRASLNLAEIR 1021
>gi|419961441|ref|ZP_14477449.1| helicase [Rhodococcus opacus M213]
gi|414573297|gb|EKT83982.1| helicase [Rhodococcus opacus M213]
Length = 1072
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 221/480 (46%), Gaps = 54/480 (11%)
Query: 165 QIPAHIESKLLPFQRDGVR---FALQHGGRILLADEMGLGKTIQAIAVATCFRD----VW 217
+ P+ ++++L P+Q +G R F +HG +LAD+MGLGKT+QA+A+ R
Sbjct: 603 EAPSTLDAQLRPYQLEGFRWLAFLWEHGLGGILADDMGLGKTLQALALICHARQSNPAAP 662
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
P LI+ P+S+ +W + + P VV +S + ++R +P D L
Sbjct: 663 PFLIVAPTSVVSNWES---ESARFAPDATVVAISD-------------TRSRRRVPFDEL 706
Query: 278 FN-----IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
+ SY + S + +I DE+ F KN Q+K + + + L
Sbjct: 707 VEGADIVVTSYTLFRLEFEAYAESAWSGLILDEAQFTKNHQSKIYQCVRRL--ETPFKLA 764
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
++GTP + +EL+ L P ++ N + + Y K + + E L L +
Sbjct: 765 ITGTPMENNLMELWSLLSITAPGLFPNPARFTDYYRKP-----IEKQGDTELLAQLRRRV 819
Query: 393 --VMIRRLKKDVLAQLPVK-----------RRQQVFLDVAEKDMRQIYALFRELEVVKGK 439
+M+RR K+ V+ LP K R ++V+ +++ ++I L +++ K +
Sbjct: 820 KPLMLRRTKEQVVKDLPPKQEQVLDVELHPRHRKVYDTHLQRERQKILGLLADVD--KNR 877
Query: 440 IKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
+S ++ L + L++ Y D AK+ A+L+ L V+ G + L+F+ L
Sbjct: 878 FTILQSLTLLRQLSL-DAGLVDAEYHDVPSAKVDALLEQLADVVAGGHRALVFSQFTGFL 936
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
I + +DG T R ++ EF+E ++S+KAGG GL LT A
Sbjct: 937 GKIRDRLADAGIEHSYLDGST--RRRGDVLREFKEGA-APVFLISLKAGGFGLNLTEADY 993
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
+ W P QA DRAHRIGQ +V VY L+A DT++D V + K V+D
Sbjct: 994 CFILDPWWNPATEAQAVDRAHRIGQTRNVMVYRLIAKDTIEDKVMALKAKKSALFASVMD 1053
>gi|344306683|ref|XP_003422015.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 1-like [Loxodonta africana]
Length = 924
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 236/487 (48%), Gaps = 64/487 (13%)
Query: 173 KLLPFQRDGV-----RFALQHGGRILLADEMGLGKTIQAIAV----ATCFRDVWPVLILT 223
+L +Q +GV RF Q+G +L DEMGLGKT Q IA+ A D P LIL
Sbjct: 47 QLRSYQLEGVNWLAQRFHCQNG--CILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILC 104
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII-- 281
P S+ +W ++++ P + +G ++ ++++ + F+++
Sbjct: 105 PLSVLGNWKEEMERFAPGLPCAVY-----------AGDKEERTHLQQDLKQESCFHVLLT 153
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQA--KRTAATLPIIKKAQYALLLSGTPAL 339
+Y++ LK + L S + +++ DE+H LKN + +T + ++ + LLL+GTP
Sbjct: 154 TYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVV----FTLLLTGTPIQ 209
Query: 340 SRPIELFKQLEALYPDVY--KNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRR 397
+ EL+ L + PD++ + V ++ RY I + + + ELH L++ ++RR
Sbjct: 210 NSLQELYSLLSFVEPDIFSKEQVEDFVQRYQD-----IEKQSESASELHKLLQP-FLLRR 263
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFRELEVVKGKI-KACKSEEEVQSLKFT 455
+K DV +LP K ++ ++ A L ++L+ + ++ K K + + L+
Sbjct: 264 VKADVATELPKKTEVVIYHSMSALQKNYYKAILMKDLDAFENEMAKKVKLQNVLSQLR-- 321
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEA-----------------GCKFLIFAHHQPM 498
K + + D E + + D+L IEA G + L+F+ M
Sbjct: 322 -KCVDHPYLFDGVEPEPFEIGDHL---IEASGKLHLLDKLLAFLYSRGHRVLLFSQMTQM 377
Query: 499 LDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAS 558
LD + + R+DG R + F ++ + +LS +AGGVG+ LTAA
Sbjct: 378 LDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IFVFLLSTRAGGVGMNLTAAD 436
Query: 559 TVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
TVIF + + P + +QA RAHRIGQ SV V L+A DTV++IV SKL+ ++
Sbjct: 437 TVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIARDTVEEIVCRKAASKLQLTNMII 496
Query: 619 DGHENSL 625
+G +L
Sbjct: 497 EGGHFTL 503
>gi|269216031|ref|ZP_06159885.1| domain protein, SNF2 family [Slackia exigua ATCC 700122]
gi|269130290|gb|EEZ61368.1| domain protein, SNF2 family [Slackia exigua ATCC 700122]
Length = 1078
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 211/456 (46%), Gaps = 42/456 (9%)
Query: 165 QIPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAIAVATCFRD---- 215
++P + + L P+Q G R+ L GG +LADEMGLGKT+Q I + RD
Sbjct: 608 RVPVGLAATLRPYQEAGFRWMSHLIDLGFGG--ILADEMGLGKTLQLICLLLARRDEART 665
Query: 216 VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P L++ P+SL +WAA +++ P + VV + R
Sbjct: 666 TGPSLVVCPASLVYNWAAEFERF--APDLRVAVVAG----------DADARAEARRRADA 713
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
+F I SYD++ + F DE+ ++KN + + A+ I A + + L+G
Sbjct: 714 DVF-ITSYDLLKRDIEDYAGMRFWCEALDEAQYVKNHETQAAASVKAI--DAAHRIALTG 770
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMI 395
TP +R E++ + L P + + + +R+ + G + A+ L ++
Sbjct: 771 TPIENRVSEVWSIFDYLMPGLLGSYTRFRDRFETPIMGGDEEAAARLSAL----VGPFIL 826
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL-------EVVKGKIKACKSEEE 448
RR K DVL LP K V+ + E + R +Y +L E +G K E
Sbjct: 827 RRRKADVLTDLPEKWESVVYARL-EGEQRALYQAHEQLLRTKIAHEGEEGDDGRSKVEIL 885
Query: 449 VQSLKFTEKNLI-NKIYTD--SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQL 505
+ + + L + +Y D AK A++D + + I +G K L+F+ LD I
Sbjct: 886 AELTRLRQIALDPSLLYADYRGGGAKEQAIMDTIASCIASGEKVLVFSQFTSYLDIIGAK 945
Query: 506 FLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAEL 565
++ V I G TP R ALV F DD ++S+KAGG GL LT AS V+ A+
Sbjct: 946 LSEQGVKHYVITGSTPKKKRLALVDAFN-ADDTPVFLISLKAGGTGLNLTGASVVLHADP 1004
Query: 566 SWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 601
W QA DRAHR+GQ VNVY ++A DT+++
Sbjct: 1005 WWNAAAQNQATDRAHRMGQTRIVNVYRVIAKDTIEE 1040
>gi|315613488|ref|ZP_07888396.1| Snf2 family protein [Streptococcus sanguinis ATCC 49296]
gi|315314484|gb|EFU62528.1| Snf2 family protein [Streptococcus sanguinis ATCC 49296]
Length = 1031
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 223/481 (46%), Gaps = 52/481 (10%)
Query: 169 HIESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FRDVWPVLIL 222
+++ L +Q GVR+ L H GG +LAD+MGLGKT+Q IA T + +LIL
Sbjct: 577 QVQASLRDYQEKGVRWLQMLHHYGFGG--ILADDMGLGKTLQTIAFLTSQVTEDSRILIL 634
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PS L +WA +++ P ++ VV +NR I+S N + + S
Sbjct: 635 APSGLIYNWADEFRKF--APQLDLAVVHGL--KANREA--ILSENHQ--------IYVTS 680
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
Y + + F + DE+ +KNAQ K + + A +AL SGTP +
Sbjct: 681 YATFRQDSELYQEMAFDFLFLDEAQVMKNAQTKIAQSLRQFVVPAVFAL--SGTPIENHL 738
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDV 402
EL+ + + P + + E+ + + +K VM RR K++V
Sbjct: 739 GELWSIFQIVLPGLLPSKKEFMKLPA--------------DRVAQFIKPFVM-RRKKEEV 783
Query: 403 LAQLP----------VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL 452
L +LP ++ +Q+V + MR A + E + +++ ++ +
Sbjct: 784 LTELPDLIEVVYKNELEDQQKVIYLAQLQQMRDRLAQVTDQEFQRSRVEILSGLMRLRQI 843
Query: 453 KFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T ++ A K+ ++ D L V + G + LIF+ + ML+ I Q +
Sbjct: 844 CDTPALFMDDF--QGASGKLDSLRDLLLQVADGGHRVLIFSQFKGMLEKIEQELPDLGLT 901
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
+I G TP RQ + F + + A ++S+KAGGVGL LT A TVI +L W P
Sbjct: 902 SFKITGSTPAHDRQEMTKAFNQGER-DAFLISLKAGGVGLNLTGADTVILVDLWWNPAVE 960
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
QA RAHR+GQ V VY L+ T+++ + ++ K + QVLDG E+ +S ++I
Sbjct: 961 AQAIGRAHRMGQEQMVEVYRLITKGTIEEKIQELQEQKKHLVSQVLDGTESRASLSLAEI 1020
Query: 633 R 633
R
Sbjct: 1021 R 1021
>gi|255528070|ref|ZP_05394903.1| Non-specific serine/threonine protein kinase [Clostridium
carboxidivorans P7]
gi|296186302|ref|ZP_06854706.1| SNF2 family [Clostridium carboxidivorans P7]
gi|255508235|gb|EET84642.1| Non-specific serine/threonine protein kinase [Clostridium
carboxidivorans P7]
gi|296049103|gb|EFG88533.1| SNF2 family [Clostridium carboxidivorans P7]
Length = 1081
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 139/487 (28%), Positives = 239/487 (49%), Gaps = 55/487 (11%)
Query: 158 DLREKYDQIPAHIESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC 212
D++ QIP+ ++ +L +Q+ G + LQ+ GG +L DEMGLGKTIQ IA
Sbjct: 606 DIKNMKFQIPSALKGELRKYQKVGYNWFKTLQYLGFGG--ILGDEMGLGKTIQTIAFIVS 663
Query: 213 FRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNI 272
+ LI+ P+SL +W + +++ P+ V V + I S
Sbjct: 664 NIES-KSLIVAPTSLVYNWISEFEKF---APTVKVGV----------AYGIKSERE---- 705
Query: 273 PLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPIIK 325
+ L NI +YDV++ N+L F I DE+ ++KN+ ++ AA I
Sbjct: 706 --EVLKNIENYDVIITTYNLLKKDLESYEVLEFDFCILDEAQYIKNSNSQNAAAVKKI-- 761
Query: 326 KAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEEL 385
KA LSGTP + +EL+ + + P + + RY K + + EEL
Sbjct: 762 KANNRFALSGTPIENSLMELWSIFDFIMPGYLYDEKRFSVRYHKK----LNEAPEVIEEL 817
Query: 386 HNLMKATVMIRRLKKDVLAQLP--VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKAC 443
L+K ++ RR K +V+ +LP ++++ V L+ +K + + YA + +E++K K+K
Sbjct: 818 SKLIKPFIL-RRRKSEVIEELPSKIEKKLLVTLNDEQKKIYKTYANYA-MELIKKKVKDF 875
Query: 444 KSEE-EVQSLKFTEK--------NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAH 494
+ + +++ L + K +I K Y + AKI A+++ L I G + L+F+
Sbjct: 876 EFQNSKIEILAYITKLRQLCLDPRVIIKDYNGES-AKIEALVELLSKSIGQGHRILVFSQ 934
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
+L I + K+ + +DG P R LV +F + ++ ++S+KAGG GL L
Sbjct: 935 FTSVLKNIGRRINKEDICFSYLDGSIPSEKRINLVNDFNQGEN-SVFLISLKAGGTGLNL 993
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
T+A VI + W P QA DRAHRIGQ V V ++A T+++ + + K + +
Sbjct: 994 TSADVVIHFDPWWNPAVEEQATDRAHRIGQKKVVEVIKIVAKGTIEEKIISLQEEKKKLI 1053
Query: 615 GQVLDGH 621
G +++
Sbjct: 1054 GSLIENE 1060
>gi|172057599|ref|YP_001814059.1| non-specific serine/threonine protein kinase [Exiguobacterium
sibiricum 255-15]
gi|171990120|gb|ACB61042.1| Non-specific serine/threonine protein kinase [Exiguobacterium
sibiricum 255-15]
Length = 876
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 220/457 (48%), Gaps = 56/457 (12%)
Query: 163 YDQIPAHIESKLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRDVWP- 218
Y P ++ L P+QR G++F H G +LADEMGLGKTIQAI + + P
Sbjct: 413 YLNFPEVLDRHLYPYQRAGIQFMANLAGHDGHGILADEMGLGKTIQAIG----YLETLPP 468
Query: 219 --VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDG 276
VLI+ P+SL +W A + ++ P+ V +L+ G+ + + + +P DG
Sbjct: 469 GRVLIVAPASLLHNWQAELTRF---APTRTVHLLT---GARKHRLDQIET-----VPADG 517
Query: 277 LFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
+F +ISY + + + +VI DE+ LKN ++ I K ++AL +GT
Sbjct: 518 IF-LISYPSLRADMEAHQAVEYDVVIFDEAQHLKNPASQTAVRLRRIRAKRRFAL--TGT 574
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIR 396
P +R +L+ ++P + ++ + +H+E+ ++ +M R
Sbjct: 575 PLENRTDDLWSIFRVIFPSLLPDLQTFQT--------------WSHDEIKRFIRPFLM-R 619
Query: 397 RLKKDVLAQLPVKRRQQVFLDVA--EKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKF 454
R K +VL LP K+ + D+ +K + Y +LE ++ + K E+ ++ L
Sbjct: 620 RTKDEVLQDLPKKQIVHHYTDLGPTQKKLYASYLAKLQLETLQ-HLDETKREDRIKLLAG 678
Query: 455 TEKNLINKIYTDSA---------EAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ- 504
+ + +I D A K+ +L +E + AG + LIF+ + ML I +
Sbjct: 679 LTR--LRQICCDPALFVEDYTGESTKLERLLTLIEEKLAAGHRILIFSQYTKMLARIRER 736
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
L +++ H + + G TP R AL F +V ++S+KAGG GL L A TVI +
Sbjct: 737 LAAQQRAHFL-LTGETPVEDRVALCERFN-AGEVDLFLISLKAGGTGLNLATADTVILYD 794
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 601
W P QA DRAHR+GQ S V V LL T+++
Sbjct: 795 SWWNPAVEQQAADRAHRLGQQSPVEVIKLLMTGTIEE 831
>gi|410901417|ref|XP_003964192.1| PREDICTED: DNA excision repair protein ERCC-6-like [Takifugu
rubripes]
Length = 1421
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 224/504 (44%), Gaps = 74/504 (14%)
Query: 158 DLREKYDQ---IPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAV 209
D E++D+ +P + KL +Q+ GVR+ Q GG +L DEMGLGKTIQ I+
Sbjct: 484 DSDEEFDEGFKVPGFLWKKLFKYQQTGVRWLWELHCQQAGG--ILGDEMGLGKTIQVISF 541
Query: 210 ------------ATCFR--DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG 255
+ +R + P +I+ P+++ W W PP V VL + G
Sbjct: 542 LAGLSYSKLRTRGSNYRYAGLGPTIIVCPATVMHQWVKEFHTWW--PPFR-VAVLHETGS 598
Query: 256 SNRSGFTIVSSNTKRNIP----LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKN 311
+SN K+ IP G+ I SY V +Q+ L ++ VI DE H ++N
Sbjct: 599 --------FTSNKKKLIPEIASCHGIL-ITSYSAVRIMQDTLQGWDWHYVILDEGHKIRN 649
Query: 312 AQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGG 371
A+ T A + + +LSG+P + EL+ + ++P + + ++
Sbjct: 650 PNARVTTACKQF--RTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPI 707
Query: 372 VFGIYQGASNHE-----ELHNLMKATV---MIRRLKKDVLAQL--PVKRRQQVFLDVAEK 421
G Y AS + + +++ T+ ++RR+K DV A L P K Q +F + E
Sbjct: 708 TMGGYSNASPVQVQTAFKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCKLTE- 766
Query: 422 DMRQIYALF-----------RELEVVKGKI---KACKSEEEVQSLKFTEKNLINKIYTDS 467
+ RQ+Y F +++V G I K C + + + T+
Sbjct: 767 EQRQVYQSFLDSKEVYQILNGDMQVFSGLIALRKICNHPDLFSGGPRLLRGIPEDQLTEE 826
Query: 468 AE-------AKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
K+ V L G + L+F + ML+ + + K +++DG T
Sbjct: 827 EHFGFWKRSGKLIVVESLLRLWFRQGQRVLLFTQSRQMLNILEVFVRENKYSYVKMDGTT 886
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P +SRQ L+ + E + +L+ K GG+G+ LT A+ VI + W P QA +RA
Sbjct: 887 PISSRQPLIACYNEDKSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAW 946
Query: 581 RIGQVSSVNVYYLLANDTVDDIVW 604
RIGQ V +Y LL T+++ ++
Sbjct: 947 RIGQKQQVTIYRLLTAGTIEEKIY 970
>gi|146097991|ref|XP_001468285.1| putative DNA-dependent ATPase [Leishmania infantum JPCM5]
gi|134072652|emb|CAM71368.1| putative DNA-dependent ATPase [Leishmania infantum JPCM5]
Length = 1103
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 220/490 (44%), Gaps = 73/490 (14%)
Query: 165 QIPAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDV----W 217
+ P++I KL P+Q +GV + L G +LADEMGLGKT Q IA +
Sbjct: 157 ETPSYIRGKLRPYQIEGVNWLLGLFSRGVNGILADEMGLGKTFQTIATIAYLKFTVGMPG 216
Query: 218 PVLILTPSSLRLHWAAMIQQWL------------NIPPSEIVVVLSQLGGSNRSGFTIVS 265
P L++ P S+ +W + W +I PS +V + L ++R + ++
Sbjct: 217 PHLVVCPKSVMGNWYREFKHWCPGLLVYKFHASSDIRPS---IVKAHLHPTDRIKYDVI- 272
Query: 266 SNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK 325
+ ++++VL N+ ++ +I DE+H LKN + + A +
Sbjct: 273 --------------VTTFEMVLDELNLFKRIAWQYLIVDEAHKLKNEEGRAHTALDSL-- 316
Query: 326 KAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEEL 385
+ + L+++GTP + EL+ L L P ++ + + F G + +
Sbjct: 317 QTSHRLIITGTPLQNNLRELWALLHFLAPRLFNDSESFDT------WFDTTSGQQDANVM 370
Query: 386 HNLMK--ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKIK 441
NL K A +MIRRLK DV +P K+ V +++K R+ Y L ++ EV+ K
Sbjct: 371 SNLHKILAPLMIRRLKADVSTGIPPKKEIYVSCQLSKK-QREWYMNVLAKDAEVLN---K 426
Query: 442 ACKSEEEVQSLKFTEKNLINKIY-TDSAEAKIPAVLD------------------YLETV 482
A S + ++ + + +IN Y D E P V D L
Sbjct: 427 AGGSVASLTNVMMSLRKVINHPYLMDGGEEGPPFVTDEKLVRTSGKMIILDKLLHRLRAD 486
Query: 483 IEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAA 541
++ K LIF+ ML+ + + RIDG T R + + F D
Sbjct: 487 VQGKHKVLIFSQFTSMLNILEDYCNMRGFMYCRIDGNTSGYDRDSQMASFNSPSSDYFIF 546
Query: 542 VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 601
+LS +AGG+G+ L AA+ VI + W P +QA+DRAHRIGQ SV VY + + T+++
Sbjct: 547 LLSTRAGGLGINLQAANHVILYDSDWNPQMDLQAQDRAHRIGQKRSVRVYRFVTDGTLEE 606
Query: 602 IVWDVVRSKL 611
++ KL
Sbjct: 607 KMYRRALKKL 616
>gi|417304923|ref|ZP_12091919.1| SNF2 family helicase [Rhodopirellula baltica WH47]
gi|327538790|gb|EGF25438.1| SNF2 family helicase [Rhodopirellula baltica WH47]
Length = 914
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 141/499 (28%), Positives = 240/499 (48%), Gaps = 69/499 (13%)
Query: 131 EISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHI----------ESKLLPFQRD 180
E +G++V+I +P + + +R + DQI + I ++LLP+Q D
Sbjct: 296 ETAGHDVKI---YPDAEAFLQRELMQKHIRRECDQIRSSISDHPLRTKLLNAELLPYQLD 352
Query: 181 GVRFALQHGGRILLADEMGLGKTIQAIAVATCF---RDVWPVLILTPSSLRLHWAAMIQQ 237
G+ FA GR +LAD+MGLGKTIQ I VA D+ VL++ P+SL+ W I +
Sbjct: 353 GIAFA-AGAGRAILADDMGLGKTIQGIGVAELLAKLSDISRVLVVCPASLKSQWRDEIAR 411
Query: 238 WLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKR--NIPLDGLFNIISYDVVLKLQNILMS 295
+ S RS ++ +R D F I +Y+ VL+ + +
Sbjct: 412 F-----------------SGRSSQIVLGKGEERIEQYESDTFFTICNYEQVLRDLTAVEN 454
Query: 296 SNFKIVIADESHFLKNAQAKRTAATLPIIKKAQ--YALLLSGTPALSRPIELFKQLEALY 353
++ ++I DE +KN ++K T +I++ + + L+LSGTP +R ELF +
Sbjct: 455 VSWDLIILDEGQRIKNWESK----TSNVIRQLESPFRLVLSGTPLENRLGELFTVTRFID 510
Query: 354 PDV----YKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVK 409
D+ Y+ H++ +G G Q E++ V++RR + +V QLP
Sbjct: 511 DDLLGPAYQFFHQHHVVDDRGKTLGYRQLDVLREKMR-----PVLLRRTRAEVAKQLP-D 564
Query: 410 RRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSA- 468
R ++ A + ++++ ++VV +I A K E+ L+ + L+ ++ DS
Sbjct: 565 RTDEIIRCEATAEQKEVHDA--NMKVV-AQIAAKKFMTEMDRLRMQKCLLMARMACDSTY 621
Query: 469 ---------EAKIPAVLDYLETVI-EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDG 518
+K+ + + LE +I + K ++F+ + ML I + +R+DG
Sbjct: 622 LLDQEADEYSSKLERLGELLEGLIADPTRKIVLFSEWRRMLTRIENRLDQIGCDYVRLDG 681
Query: 519 GTPPASRQALVTEFQEKDDVKAAVLSM-KAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
P R A+V+ FQ +D + V++M AG GL L AA+TVI +L W P L Q
Sbjct: 682 QVPQKKRAAIVSRFQ--NDPECRVINMTNAGSTGLNLQAANTVINVDLPWNPAVLEQRIA 739
Query: 578 RAHRIGQVSSVNVYYLLAN 596
RA+R+GQ + V+VY L+
Sbjct: 740 RAYRMGQENPVHVYKLVTT 758
>gi|150015858|ref|YP_001308112.1| non-specific serine/threonine protein kinase [Clostridium
beijerinckii NCIMB 8052]
gi|149902323|gb|ABR33156.1| Non-specific serine/threonine protein kinase [Clostridium
beijerinckii NCIMB 8052]
Length = 979
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 147/544 (27%), Positives = 255/544 (46%), Gaps = 71/544 (13%)
Query: 123 SSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQI-------PAHIESKLL 175
S+ EKV E + EN+ + +I +++ D+ K D I P+ + L
Sbjct: 471 SNNEKVKIEKNKALCLYENMKNIGLGSIENSNELDDIENKLDNINNKNISIPSDFKGILR 530
Query: 176 PFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLH 230
+Q +G ++ + GG +LADEMGLGKTIQ IA+ ++ I+ P+SL +
Sbjct: 531 EYQINGFKWLKTLSEVGFGG--ILADEMGLGKTIQVIALLLSEKNK-KTCIICPTSLLYN 587
Query: 231 WAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQ 290
W ++L PS VV++ GS R + +I YDVVL
Sbjct: 588 WK---DEFLRFAPSLRVVMIH---GSQRDKV---------------MEDICEYDVVLTTY 626
Query: 291 NILM-------SSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
L F I DE +KN++A+ + A I K ++AL +GTP +
Sbjct: 627 GTLRLDIDNYRDIVFDYCIIDEGQSIKNSEAQNSRAVKEIQAKIRFAL--TGTPIENNLT 684
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVL 403
EL+ + + P ++ ++ I + N E L ++K ++ RR KK+V+
Sbjct: 685 ELWSIFDFIMPGYLYAKEKFEEKF-------ISRREENLENLKTMIKPFIL-RRTKKEVM 736
Query: 404 AQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEK------ 457
+LP K + + +++ + +Y+ + ++ VK +K K + ++ + K
Sbjct: 737 NELPDKIEKTLLVEMT-PSQKAVYSNY--VKRVKAAMKNNK-DGRIEIFSYLTKLREICL 792
Query: 458 --NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
+LI + Y + KI V++ ++ I++G K L+F+ LD I K+K+
Sbjct: 793 DPSLILEDY-NGGSGKIEEVVEIIKNHIDSGGKILLFSQFTSALDRIGDRLNKEKIEFFH 851
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
+ G T P +R +V +F + V ++S+KAGG GL LT+A+ VI + W P QA
Sbjct: 852 LSGKTNPKNRIKMVKDFNTNEFVNVFLISLKAGGTGLNLTSANLVIHFDPWWNPAVEAQA 911
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSS 635
DRAHRIGQ V V L++ T+++ + + K + + +L G E+ +S + S
Sbjct: 912 TDRAHRIGQRDVVEVIKLVSKGTIEEKIILLQEDKKQLIDSILTG-----ELKNSGLLGS 966
Query: 636 PAKQ 639
+K+
Sbjct: 967 LSKE 970
>gi|255101318|ref|ZP_05330295.1| putative helicase [Clostridium difficile QCD-63q42]
Length = 1059
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 142/501 (28%), Positives = 234/501 (46%), Gaps = 61/501 (12%)
Query: 165 QIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPV 219
+IP ++ + L +Q +G+ + + GG +LADEMGLGKTIQ IA +
Sbjct: 599 EIPTNLNANLRDYQINGLNWFKVLDYYKFGG--ILADEMGLGKTIQTIAFLLSLSNK-KS 655
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
LI+TP+SL +W +++ +I V+L +R + N
Sbjct: 656 LIVTPTSLIYNWKNEFEKF----APDIKVLLIHGNKRDREKCFMKLEN------------ 699
Query: 280 IISYDVVLKLQNILMSS-------NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
+DV+L L + F I DE+ +KN A T + I + ++AL
Sbjct: 700 ---FDVILTTYGTLRNDLDKYSEIKFDYCILDEAQNIKNPVALVTESVKSINAENKFAL- 755
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIY-QGASNHEELHNLMKA 391
+GTP + +EL+ + + P G Y K ++ N + L L+K
Sbjct: 756 -TGTPMENNLLELWSIFDFIMP---------GYLYSKAKFQELFINKEDNVKNLKKLIKP 805
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQS 451
++ RR KK V+ +LP K + F+++ K+ ++IY+++ + K K K K ++ V
Sbjct: 806 FIL-RRSKKQVMKELPDKIEKNFFVEL-NKEQKKIYSVYSKDIQDKMKDKNLKKDKIVIF 863
Query: 452 LKFT-------EKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
T + +++ K Y + +KI L+ L I K L+F+ +L I +
Sbjct: 864 SYLTKLRQLCLDPSIVVKDYNKKS-SKIETCLEILRDSINENHKILLFSQFTSVLKNISK 922
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
K K+ IDG T R LV EF D K ++S+KAGG GL LT+A VI +
Sbjct: 923 ELDKYKIKYHYIDGKTNAKERLELVDEFNNSMDKKVFLISLKAGGTGLNLTSADMVIHFD 982
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 624
W P QA DRAHR GQ +SV V L+A T+++ + + SK E + Q ++G
Sbjct: 983 PWWNPSVENQASDRAHRFGQKNSVQVIKLIAKGTIEEKIIKLQESKKELINQFING---- 1038
Query: 625 LEVSSSQIRSSPAKQKTLDSF 645
E+S+ + S + ++ ++ F
Sbjct: 1039 -ELSNEGVLKSLSDEEIINLF 1058
>gi|348030817|ref|YP_004873503.1| SNF2-like protein [Glaciecola nitratireducens FR1064]
gi|347948160|gb|AEP31510.1| SNF2-related protein [Glaciecola nitratireducens FR1064]
Length = 1433
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 138/485 (28%), Positives = 234/485 (48%), Gaps = 41/485 (8%)
Query: 165 QIPAHIESKLLPFQRDGVRFA--LQH-GGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
+IP+ +++L +Q G +A L H G LAD+MGLGKT+QA+AV P L+
Sbjct: 957 KIPSTFQAQLREYQIAGFDWASRLAHWGAGACLADDMGLGKTLQALAVLLTRASQGPSLV 1016
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL--FN 279
+ P+S+ +W Q+ L P+ N F S +R L+ L F+
Sbjct: 1017 IAPTSVCFNWQ---QEALKFAPT-----------LNIKLFADAPSTLQRIELLNDLKPFD 1062
Query: 280 --IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
IISY ++ + +IL + ++ADE+ LKN KRT A + + K + ++ +GTP
Sbjct: 1063 CVIISYGLLQRETDILKEVRWHSIVADEAQALKNPLTKRTKAAIAL--KGDFKMITTGTP 1120
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV---M 394
+ EL+ + P + N+ +G R+ + + + +KA + +
Sbjct: 1121 IENDLTELWSLFRFINPGLLGNLKRFGQRFSTP-IENAKEDKLAARKASQGLKALIQPFI 1179
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACK----SEEEVQ 450
+RR+K VL +LP + + +++++K+ R Y R L + +A + E+ ++
Sbjct: 1180 LRRMKNQVLTELPSRTDITIQVEMSQKE-RDFYEALR-LNAIDNISQAGQQVNAGEQRIR 1237
Query: 451 SL----KFTEKNLINKIY---TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
L K + K+ TD + AK+ A+ + L+ + K LIF+ L I
Sbjct: 1238 MLAELVKLRQACCHPKLVMAETDISSAKLAALNELLDELTLNNHKALIFSQFVGHLKIIK 1297
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
Q K +DG TP RQ V FQ + ++S+KAGG GL LTAA VI
Sbjct: 1298 QHLEAKGFSYQYLDGSTPQKERQKRVNAFQAGEG-DIFLISLKAGGSGLNLTAADYVIHM 1356
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
+ W P QA DRAHR+GQ V +Y L+ +T+++ + + + K + ++L G+E
Sbjct: 1357 DPWWNPAVEEQASDRAHRMGQKRPVTIYRLITQNTIEEKIVALHQHKRDLADKLLSGNEA 1416
Query: 624 SLEVS 628
+ ++S
Sbjct: 1417 ATKLS 1421
>gi|421613310|ref|ZP_16054396.1| helicase, Snf2 family protein [Rhodopirellula baltica SH28]
gi|408495904|gb|EKK00477.1| helicase, Snf2 family protein [Rhodopirellula baltica SH28]
Length = 914
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 140/499 (28%), Positives = 240/499 (48%), Gaps = 69/499 (13%)
Query: 131 EISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHI----------ESKLLPFQRD 180
E +G++V+I +P + + +R + DQI + I ++LLP+Q D
Sbjct: 296 ETAGHDVKI---YPDAEAFLQRELMQKHIRRECDQIRSSISDHPLRTKLLNAELLPYQLD 352
Query: 181 GVRFALQHGGRILLADEMGLGKTIQAIAVATCF---RDVWPVLILTPSSLRLHWAAMIQQ 237
G+ FA GR +LAD+MGLGKTIQ I VA D+ VL++ P+SL+ W I +
Sbjct: 353 GIAFA-AGAGRAILADDMGLGKTIQGIGVAELLAKLSDISRVLVVCPASLKSQWRDEITR 411
Query: 238 WLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKR--NIPLDGLFNIISYDVVLKLQNILMS 295
+ S RS ++ +R D F I +Y+ VL+ + +
Sbjct: 412 F-----------------SGRSSQIVLGKGEERIEQYESDTFFTICNYEQVLRDLTAVEN 454
Query: 296 SNFKIVIADESHFLKNAQAKRTAATLPIIKKAQ--YALLLSGTPALSRPIELFKQLEALY 353
++ ++I DE +KN ++K T +I++ + + L+LSGTP +R ELF +
Sbjct: 455 VSWDLIILDEGQRIKNWESK----TSNVIRQLESPFRLVLSGTPLENRLGELFTVTRFID 510
Query: 354 PDV----YKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVK 409
D+ Y+ H++ +G G Q E++ V++RR + +V QLP
Sbjct: 511 DDLLGPAYQFFHQHHVVDDRGKTLGYRQLDVLREKMR-----PVLLRRTRAEVAKQLP-D 564
Query: 410 RRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSA- 468
R ++ A + ++++ ++VV +I A K E+ L+ + L+ ++ DS
Sbjct: 565 RTDEIIRCEATAEQKEVHDA--NMKVV-AQIAAKKFMTEMDRLRMQKCLLMARMACDSTY 621
Query: 469 ---------EAKIPAVLDYLETVI-EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDG 518
+K+ + + LE +I + K ++F+ + ML + + +R+DG
Sbjct: 622 LLDQEADEYSSKLERLGELLEGLIADPTRKIVLFSEWRRMLTRVENRLDQIGCDYVRLDG 681
Query: 519 GTPPASRQALVTEFQEKDDVKAAVLSM-KAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
P R A+V+ FQ +D + V++M AG GL L AA+TVI +L W P L Q
Sbjct: 682 QVPQKKRAAIVSRFQ--NDPECRVINMTNAGSTGLNLQAANTVINVDLPWNPAVLEQRIA 739
Query: 578 RAHRIGQVSSVNVYYLLAN 596
RA+R+GQ + V+VY L+
Sbjct: 740 RAYRMGQENPVHVYKLVTT 758
>gi|410645195|ref|ZP_11355663.1| helicase [Glaciecola agarilytica NO2]
gi|410135428|dbj|GAC04062.1| helicase [Glaciecola agarilytica NO2]
Length = 1434
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 230/481 (47%), Gaps = 35/481 (7%)
Query: 166 IPAHIESKLLPFQRDGVRFA--LQH-GGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
IP+ +++L +Q G +A L H G LAD+MGLGKT+QA+A+ + P L++
Sbjct: 959 IPSTFQAQLRDYQLVGFDWATRLAHWGAGACLADDMGLGKTLQALAILLSRANEGPSLVI 1018
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+S+ +W Q+ L P+ + V + +N ++ S P D + IIS
Sbjct: 1019 APTSVCFNWQ---QEALKFAPTLNIKVFA--DSTNTIAREVLLSELG---PFDCV--IIS 1068
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
Y ++ + IL ++ ++ADE+ LKN AKRT A + K+ + ++ +GTP +
Sbjct: 1069 YGLLQRESEILKKVHWHSIVADEAQALKNPLAKRTKAAYAL--KSDFKMITTGTPIENNL 1126
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYC---KGGVFGIYQGASNHEELHNLMKATVMIRRLK 399
EL+ + P + N+ + R+ + + L L++ ++ RR+K
Sbjct: 1127 TELWSLFRFINPGLLGNIKRFAQRFSLPIENAHEDPLAARKASQALKTLIQPFIL-RRMK 1185
Query: 400 KDVLAQLPVKRRQQVFLDVA--EKDMRQIYALFRELEVVKGKIKACKSEEEVQSL----K 453
VL +LP + + ++++ E+D + L + + +A SE+ ++ L K
Sbjct: 1186 NQVLTELPSRTEINIRVEMSSQERDFYEALRLNAIDNINQSGQQANASEQRIRMLAELVK 1245
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKF-----LIFAHHQPMLDAIHQLFLK 508
+ K+ AE IP+ + K LIF+ L I Q
Sbjct: 1246 LRQACCNPKLVM--AETTIPSAKLAALDALLEELKLNNHKALIFSQFVGHLQLIKQHLED 1303
Query: 509 KKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAAVLSMKAGGVGLTLTAASTVIFAELSW 567
K +DG TP RQA V FQ + D+ ++S+KAGG GL LTAA VI + W
Sbjct: 1304 KGFDYQYLDGSTPQKQRQASVNAFQRGQGDI--FLISLKAGGSGLNLTAADYVIHMDPWW 1361
Query: 568 TPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
P QA DRAHRIGQ+ V +Y L+ +T+++ + + + K + +L G+E S ++
Sbjct: 1362 NPAVEEQASDRAHRIGQLRPVTIYRLITQNTIEEKIVALHKQKRDLADNLLAGNEASAKL 1421
Query: 628 S 628
S
Sbjct: 1422 S 1422
>gi|348586658|ref|XP_003479085.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Cavia
porcellus]
Length = 1090
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 237/486 (48%), Gaps = 64/486 (13%)
Query: 174 LLPFQRDGV-----RFALQHGGRILLADEMGLGKTIQAIAV----ATCFRDVWPVLILTP 224
L P+Q +GV RF Q+G +L DEMGLGKT Q IA+ A D P LIL P
Sbjct: 239 LRPYQLEGVNWLAQRFHCQNG--CILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCP 296
Query: 225 SSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--S 282
S+ +W +Q+ P V + G ++ ++++ D F+++ +
Sbjct: 297 LSVLSNWKEEMQR---CAPGLSCVTYA--------GDKEERAHLQQDLTEDSPFHVLLTT 345
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQA--KRTAATLPIIKKAQYALLLSGTPALS 340
Y++ LK L S ++ +++ DE+H LKN + +T + ++ ++LLL+GTP +
Sbjct: 346 YEICLKDALFLKSFSWSVLVVDEAHRLKNQSSLLHKTLSEFSVV----FSLLLTGTPVQN 401
Query: 341 RPIELFKQLEALYPDVY--KNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRL 398
EL+ L + PD++ + V ++ +RY I + + + ELH L++ ++RR+
Sbjct: 402 SLQELYSLLSFVEPDLFCKEQVEDFVHRYQD-----IEKESKSASELHKLLQP-FLLRRV 455
Query: 399 KKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFRELEVVKGKI-KACKSEEEVQSLKFTE 456
K +V +LP K ++ ++ + A L ++L+ + ++ K K + + L+
Sbjct: 456 KAEVATELPKKTEVVIYHGMSPLQKKYYKAILMKDLDAFENEMAKKVKLQNILSQLR--- 512
Query: 457 KNLINKIYTDSAEAKIPAVLDYLETVIEA-----------------GCKFLIFAHHQPML 499
K + + D E + V D+L IEA G + L+F+ ML
Sbjct: 513 KCVDHPYLFDGVEPEPFEVGDHL---IEASGKLYLLDKLLAFLYSRGHRVLLFSQMTQML 569
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
D + + R+DG R + F ++ + +LS +AGGVG+ L AA T
Sbjct: 570 DILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IFVFLLSTRAGGVGMNLMAADT 628
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
VIF + + P + +QA RAHRIGQ SV V L+ DTV++IV+ SKL+ +++
Sbjct: 629 VIFIDSDFNPQNDLQAVARAHRIGQNKSVKVIRLIGRDTVEEIVYRRAASKLQLTNMIIE 688
Query: 620 GHENSL 625
G +L
Sbjct: 689 GGHFTL 694
>gi|332662947|ref|YP_004445735.1| SNF2-like protein [Haliscomenobacter hydrossis DSM 1100]
gi|332331761|gb|AEE48862.1| SNF2-related protein [Haliscomenobacter hydrossis DSM 1100]
Length = 1472
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 135/522 (25%), Positives = 244/522 (46%), Gaps = 51/522 (9%)
Query: 142 LHPLVQRAIASASAAPD-------LREKYDQI----------PAHIESKLLPFQRDGVRF 184
LHPL A+ S ++ D +E +++ P ++ L +Q +G +
Sbjct: 964 LHPLAAPAMESFTSLLDQVEADKRFKESIERMKQAFTRHYIPPTAFKATLREYQTEGFEW 1023
Query: 185 ALQ---HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNI 241
+ G LAD+MGLGKT+QA+A+ + P L++ P+S+ +W A I ++
Sbjct: 1024 LCRLADWGVGACLADDMGLGKTVQALALLQLRAEQGPALVVAPASVCRNWVAEIGKF--- 1080
Query: 242 PPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
E+ VL G +R + + P G I +YD++ + F +
Sbjct: 1081 -TPELTPVL--FGEGDRE------AEIDKAKP--GQILITTYDLLTREAESFTKKIFSTI 1129
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
I DE+ +KN KR+ + + + + L+ +GTP + EL+ + + P + ++
Sbjct: 1130 ILDEAQAIKNRATKRSETAMRL--QGDFKLITTGTPLENHLGELWNLFQFINPGLLGSME 1187
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
+ R+ + S ++L L++ ++ RR K +VL +LP K + ++++ +
Sbjct: 1188 SFNERFAVP--IERFGDDSRRDQLRRLIQPFIL-RRRKDEVLKELPEKTEITLTVELSGE 1244
Query: 422 DMRQIYALFR----ELEV-----VKGKIKACKSEEEVQSLK--FTEKNLINKIYTDSAEA 470
+ AL R +LE ++G K + E+ L+ ++++ + A
Sbjct: 1245 EKAFYEALRRKALEDLEQSMEGGMQGGQKHLRILAEIMRLRRAACHPGMVDRQFIKDQSA 1304
Query: 471 KIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVT 530
K+ + +E ++E G K L+F+ L + K ++ +DG TP +RQ +
Sbjct: 1305 KLRLFGEVVEELLENGHKALVFSQFVDHLSILENYLKSKNINYQYLDGQTPLPTRQKRIE 1364
Query: 531 EFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNV 590
FQ D ++S+KAGGVGL LTAA VI + W P QA DRAHRIGQ V V
Sbjct: 1365 AFQAGDG-DLFLISLKAGGVGLNLTAADYVIHMDPWWNPAVEDQATDRAHRIGQEKPVTV 1423
Query: 591 YYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
Y L+A DT+++ + + +K + +L G + S +S+ +
Sbjct: 1424 YRLVAEDTIEEKILKLHSTKRDLADSLLSGSDVSARLSADDL 1465
>gi|270292306|ref|ZP_06198517.1| Snf2 family protein [Streptococcus sp. M143]
gi|270278285|gb|EFA24131.1| Snf2 family protein [Streptococcus sp. M143]
Length = 1031
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 222/478 (46%), Gaps = 48/478 (10%)
Query: 170 IESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATC-FRDVWPVLILTPS 225
+++ L +Q GVR+ L H G +LAD+MGLGKT+Q IA T + VLIL PS
Sbjct: 578 VQASLRDYQEKGVRWLQMLHHYGFGGILADDMGLGKTLQTIAFLTSQVTEDSRVLILAPS 637
Query: 226 SLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDV 285
L +WA +++ P ++ VV +NR I+S N + + SY
Sbjct: 638 GLIYNWADEFRKF--APQLDLAVVHGL--KANREA--ILSENHQ--------IYVTSYAT 683
Query: 286 VLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIEL 345
+ + F + DE+ +KNAQ K + + A +AL SGTP + EL
Sbjct: 684 FRQDSELYQEMAFDFLFLDEAQVMKNAQTKIAQSLRQFVVPAVFAL--SGTPIENHLGEL 741
Query: 346 FKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
+ + + P + + E+ + + +K VM RR K++VL +
Sbjct: 742 WSIFQIVLPGLLPSKKEFMKLPA--------------DRVAQFIKPFVM-RRKKEEVLTE 786
Query: 406 LP----------VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
LP ++ +Q+ + MR+ A + E + +++ ++ + T
Sbjct: 787 LPDLIEVVYKNELEDQQKAIYLAQLQQMRERLAQVTDQEFQRSRVEILSGLMRLRQICDT 846
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
++ A K+ ++ D L V + G + LIF+ + ML+ I Q + +
Sbjct: 847 PALFMDDY--QGASGKLDSLRDLLLQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFK 904
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
I G TP RQ + F + + A ++S+KAGGVGL LT A TVI +L W P QA
Sbjct: 905 ITGSTPAHDRQEMTKAFNQGER-DAFLISLKAGGVGLNLTGADTVILVDLWWNPAVEAQA 963
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIR 633
RAHR+GQ V VY L+ T+++ + ++ K + QVLDG E+ +S ++IR
Sbjct: 964 IGRAHRMGQEQMVEVYRLITKGTIEEKIQELQEQKKHLVSQVLDGTESRASLSLAEIR 1021
>gi|261368900|ref|ZP_05981783.1| SNF2 family protein [Subdoligranulum variabile DSM 15176]
gi|282568998|gb|EFB74533.1| SNF2 family N-terminal domain protein [Subdoligranulum variabile
DSM 15176]
Length = 811
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 231/488 (47%), Gaps = 53/488 (10%)
Query: 166 IPAHIESKLLPFQRDGVRFA----LQHGGRILLADEMGLGKTIQAIAV---ATCFRDVWP 218
+P ++ LP+QR+G+++ L H G L AD+MGLGKT Q IA + +
Sbjct: 356 LPEPVDKMALPYQREGIQWLKFLFLNHLGGCL-ADDMGLGKTFQVIAFLEDNDVKKHLQK 414
Query: 219 VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
VLI+ P SL +W +++ + + R G I N + +
Sbjct: 415 VLIVVPKSLLTNWKREFEKFCS---------------NYRVG--IYHGNKRSELDFGKCD 457
Query: 279 NIIS-YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
II+ Y+ L + L F IV+ DE +KN ++ + A I A+ + LSGTP
Sbjct: 458 VIITTYNTALLDKEYLDHKGFTIVVLDEIQTVKNYKSITSQAIKEI--HAEMKIGLSGTP 515
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRR 397
+ EL+ ++ + P + + +RY N++EL ++ ++ RR
Sbjct: 516 MENGISELWNVMDIVNPGAFPGHSAFLHRY----------HDRNYDELKEILNLFIL-RR 564
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEK 457
+KKDVL QLP K Q ++ D+ R + ++ ++K + ++ L +
Sbjct: 565 MKKDVLKQLPPKYEQIIYCDMDIAQRRLYTGINIAVKSAISRLKIFAAPVVLKGLTLLRE 624
Query: 458 NLINKIYTDSA--------EAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKK 509
+ + D K+ A+ + + E+G K LIF+++ ML I Q K+
Sbjct: 625 CCCHPLLLDDTINVEGVVDSCKLDALKILVADLFESGHKILIFSNYTSMLHLIRQELEKR 684
Query: 510 ---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELS 566
K + +DG T R LV +F EK ++S+KAGGVGL LT+A VI +
Sbjct: 685 SEYKANLFYLDGKT--QQRNLLVEQF-EKASAGIFLISIKAGGVGLNLTSAQDVIIYDPW 741
Query: 567 WTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
W P QA DRA+RIGQ +VNVY L+A +T+++ + D+ + K ++ ++++G
Sbjct: 742 WNPFVEQQAIDRAYRIGQQQAVNVYKLVAANTIEEKILDMQKDKEQDFEELINGISTDKN 801
Query: 627 VSSSQIRS 634
+ ++I S
Sbjct: 802 IDLNKILS 809
>gi|403352061|gb|EJY75536.1| Helicase [Oxytricha trifallax]
Length = 1177
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 211/453 (46%), Gaps = 58/453 (12%)
Query: 193 LLADEMGLGKTIQAIAVATCFRDVWPV----------LILTPSSLRLHWAAMIQQWLNIP 242
+LADEMGLGKTIQ+IA+ +++ P + W IQ+W+
Sbjct: 155 ILADEMGLGKTIQSIAIMALVESFKTQEQRESRKTHHIVIVPKIVLGKWNKEIQEWV--- 211
Query: 243 PSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVI 302
PS + L Q GSN + R D + + +++ V++ + L +F+ +I
Sbjct: 212 PS---LRLKQFYGSNEE--REIQKQEMRQHQFDIM--LTTFETVIREKGELSKYHFEFLI 264
Query: 303 ADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHE 362
DE+ +KN ++ + K Q+ +LL+GTP + EL+ L L P ++ + E
Sbjct: 265 LDEAQRIKNDESVLSQVLRKF--KTQHRILLTGTPLQNNLKELWALLNFLMPKLFDSAEE 322
Query: 363 YGNRYCKGGVFGIYQGASNH--EELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAE 420
+ + + Y+GA ++H L++ M+RRLK DV LP K+ +F+ ++
Sbjct: 323 FKELFM---IKNEYEGAQEQIIRQIHRLLRP-FMLRRLKVDVEKNLPTKKEIYLFIGLS- 377
Query: 421 KDMRQIYA--LFRELEVVKG---KIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIP- 473
K +Q+Y L ++VV G KIK ++ K + N Y D E P
Sbjct: 378 KLQKQLYKNILTGNIDVVNGVGDKIKLL-------NVLMQLKKVCNHPYLFDKVEPGPPF 430
Query: 474 -------------AVLDYL-ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGG 519
VLD L ++ GCK LIF+ +LD + + RIDG
Sbjct: 431 LDGEHLIDNCMKFKVLDLLVPKLLNQGCKILIFSQMTRLLDILDDFLRFRGYQYCRIDGQ 490
Query: 520 TPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDR 578
T R+ + EFQ+ D K +LS +AGG+G+ L +A+ VI + W P +QA DR
Sbjct: 491 TSANDREIRIEEFQKADSTKQLFILSTRAGGLGINLHSANVVIIFDSDWNPQVDLQAIDR 550
Query: 579 AHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
AHRIGQ V VY + +V++ + + KL
Sbjct: 551 AHRIGQKRDVVVYRFVTEGSVEEKIVERAARKL 583
>gi|322375571|ref|ZP_08050083.1| Snf2 family protein [Streptococcus sp. C300]
gi|321279279|gb|EFX56320.1| Snf2 family protein [Streptococcus sp. C300]
Length = 1031
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 227/482 (47%), Gaps = 54/482 (11%)
Query: 169 HIESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FRDVWPVLIL 222
+++ L +Q GVR+ L H GG +LAD+MGLGKT+Q IA T + VLIL
Sbjct: 577 QVQASLRDYQEKGVRWLQMLHHYGFGG--ILADDMGLGKTLQTIAFLTSQVTEDSRVLIL 634
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PS L +WA +++ P ++ VV +NR I+S N + + S
Sbjct: 635 APSGLIYNWADEFRKF--APQLDLAVVHGL--KANREA--ILSENHQ--------IYVTS 680
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
Y + + F + DE+ +KNAQ K + + A +AL SGTP +
Sbjct: 681 YATFRQDSELYQEMAFDFLFLDEAQVMKNAQTKIAQSLRQFVVPAVFAL--SGTPIENHL 738
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDV 402
EL+ + + P + + E+ + + +K VM RR K++V
Sbjct: 739 GELWSIFQIVLPGLLPSKKEFMKLPA--------------DRVAQFIKPFVM-RRKKEEV 783
Query: 403 LAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE------EVQSLKFTE 456
L +LP + V+ + E + IY +L+ ++ ++ +E E+ S
Sbjct: 784 LTELP-DLIEVVYKNELEDQQKAIY--LAQLQQMRDRLAQVTDQEFQRSRVEILSGLMRL 840
Query: 457 KNLINK--IYTD---SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKV 511
+ + + ++ D A K+ ++ D L V + G + LIF+ + ML+ I Q +
Sbjct: 841 RQICDTPALFMDDYQGASGKLDSLRDLLLQVADGGHRVLIFSQFKGMLEKIEQELPDLGL 900
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
+I G TP RQ + F + + A ++S+KAGGVGL LT A TVI +L W P
Sbjct: 901 TSFKITGSTPAHDRQEMTKAFNQGER-DAFLISLKAGGVGLNLTGADTVILVDLWWNPAV 959
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ 631
QA RAHR+GQ V VY L+ T+++ + ++ K + QVLDG E+ +S ++
Sbjct: 960 EAQAIGRAHRMGQEQKVEVYRLITKGTIEEKIQELQEQKKHLVSQVLDGTESRASLSLAE 1019
Query: 632 IR 633
IR
Sbjct: 1020 IR 1021
>gi|32473602|ref|NP_866596.1| SNF2 family helicase [Rhodopirellula baltica SH 1]
gi|32398282|emb|CAD78377.1| helicase, Snf2 family [Rhodopirellula baltica SH 1]
Length = 914
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 140/499 (28%), Positives = 240/499 (48%), Gaps = 69/499 (13%)
Query: 131 EISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHI----------ESKLLPFQRD 180
E +G++V+I +P + + +R + DQI + I ++LLP+Q D
Sbjct: 296 ETAGHDVKI---YPDAEAFLQRELMQKHIRRECDQIRSSISDHPLRTKLLNAELLPYQLD 352
Query: 181 GVRFALQHGGRILLADEMGLGKTIQAIAVATCF---RDVWPVLILTPSSLRLHWAAMIQQ 237
G+ FA GR +LAD+MGLGKTIQ I VA D+ VL++ P+SL+ W I +
Sbjct: 353 GIAFA-AGAGRAILADDMGLGKTIQGIGVAELLAKLSDISRVLVVCPASLKSQWRDEIAR 411
Query: 238 WLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKR--NIPLDGLFNIISYDVVLKLQNILMS 295
+ S RS ++ +R D F I +Y+ VL+ + +
Sbjct: 412 F-----------------SGRSSQIVLGKGEERIEQYESDTFFTICNYEQVLRDLTAVEN 454
Query: 296 SNFKIVIADESHFLKNAQAKRTAATLPIIKKAQ--YALLLSGTPALSRPIELFKQLEALY 353
++ ++I DE +KN ++K T +I++ + + L+LSGTP +R ELF +
Sbjct: 455 VSWDLIILDEGQRIKNWESK----TSNVIRQLESPFRLVLSGTPLENRLGELFTVTRFID 510
Query: 354 PDV----YKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVK 409
D+ Y+ H++ +G G Q E++ V++RR + +V QLP
Sbjct: 511 DDLLGPAYQFFHQHHVVDDRGKTLGYRQLDVLREKMR-----PVLLRRTRAEVAKQLP-D 564
Query: 410 RRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSA- 468
R ++ A + ++++ ++VV +I A K E+ L+ + L+ ++ DS
Sbjct: 565 RTDEIIRCEATAEQKEVHDA--NMKVV-AQIAAKKFMTEMDRLRMQKCLLMARMACDSTY 621
Query: 469 ---------EAKIPAVLDYLETVI-EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDG 518
+K+ + + LE +I + K ++F+ + ML + + +R+DG
Sbjct: 622 LLDQEADEYSSKLERLGELLEGLIADPTRKIVLFSEWRRMLTRVENRLDQIGCDYVRLDG 681
Query: 519 GTPPASRQALVTEFQEKDDVKAAVLSM-KAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
P R A+V+ FQ +D + V++M AG GL L AA+TVI +L W P L Q
Sbjct: 682 QVPQKKRAAIVSRFQ--NDPECRVINMTNAGSTGLNLQAANTVINVDLPWNPAVLEQRIA 739
Query: 578 RAHRIGQVSSVNVYYLLAN 596
RA+R+GQ + V+VY L+
Sbjct: 740 RAYRMGQENPVHVYKLVTT 758
>gi|220910355|ref|YP_002485666.1| Non-specific serine/threonine protein kinase [Cyanothece sp. PCC
7425]
gi|219866966|gb|ACL47305.1| Non-specific serine/threonine protein kinase [Cyanothece sp. PCC
7425]
Length = 1403
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 236/483 (48%), Gaps = 38/483 (7%)
Query: 165 QIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
++P+ +++ L +Q DG + L H G LAD+MGLGKT+QA+AV P L+
Sbjct: 935 ELPSTLQADLRDYQIDGFHWLARLAHWGVGACLADDMGLGKTLQALAVILTRAPAGPTLV 994
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
+ P+S+ ++W + Q++ P+ + L Q G +R PLD L +
Sbjct: 995 VAPTSVGMNWISEAQRF---APT---LNLIQFGSGDRQKLL------DHLQPLDLL--VC 1040
Query: 282 SYDVVLK--LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
SY ++ + + +L ++ ++ DE+ +KN KR+ A + + + + L+ +GTP
Sbjct: 1041 SYGLLQQEEVAEMLARVEWQTIVLDEAQSIKNVATKRSQAAMNL--QGGFKLITTGTPIE 1098
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLK 399
+ EL+ + P + ++ + R+ Y + L L++ ++ RR K
Sbjct: 1099 NHLGELWNLFRFINPGLLGSLESFNQRFATP--IEKYGDRAARTRLKKLIQPFIL-RRTK 1155
Query: 400 KDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVK-------GKIKACKSEEEVQSL 452
VLA+LP + + +D+++++M Y R+ + K K + E+ L
Sbjct: 1156 NQVLAELPSRTEIILHVDLSQEEM-AFYEALRQQAITKLSESDATAGAKHLQVLAEIMKL 1214
Query: 453 KFTEKNLINKIYTDSA--EAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKK 510
+ N + D+ AK+ + LE ++ K L+F+ L I ++K
Sbjct: 1215 RRACCN-ARLVMPDTPLPSAKLQLFGEVLEELLANQHKALVFSQFVDHLQLIRAYLEEQK 1273
Query: 511 VHCIRIDGGTPPASRQALVTEFQE-KDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTP 569
+ +DG TP A R+ V FQ + DV ++S+KAGG GL LTAA VI + W P
Sbjct: 1274 ITYQYLDGSTPAAERKKRVDAFQAGQGDV--FLISLKAGGTGLNLTAADYVIHMDPWWNP 1331
Query: 570 GDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSS 629
QA DRAHRIGQ V +Y L+A T+++ + D+ + K + +LDG + S ++S+
Sbjct: 1332 AVEDQASDRAHRIGQHRPVTIYRLVAKHTIEEKIVDLHQHKRDLADSLLDGTDISGKIST 1391
Query: 630 SQI 632
++
Sbjct: 1392 DEL 1394
>gi|367005456|ref|XP_003687460.1| hypothetical protein TPHA_0J02060 [Tetrapisispora phaffii CBS 4417]
gi|357525764|emb|CCE65026.1| hypothetical protein TPHA_0J02060 [Tetrapisispora phaffii CBS 4417]
Length = 1075
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 230/484 (47%), Gaps = 43/484 (8%)
Query: 155 AAPDLREKYDQIPAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVAT 211
A D+ ++ + P++++ L P+Q G+ + + + G +LADEMGLGKT+Q IA
Sbjct: 105 ALDDVEFQFRESPSYVDGTLRPYQIQGINWLISLYKSGLSGILADEMGLGKTLQTIAFLG 164
Query: 212 CFRDV----WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSN 267
R + P L++ P S +W I +W E+ + Q R+G
Sbjct: 165 YLRYIEKKPGPYLVIAPKSTLNNWLREINKW----TPEVNAFILQGDKEERAGLI----- 215
Query: 268 TKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKA 327
K+ + D + SY+++++ ++ +++ ++ DE+H +KN ++ + K+
Sbjct: 216 QKKLVGCDFDIVVSSYEIIIREKSAFRKIDWEYIVIDEAHRIKNEESMLSQVLREF--KS 273
Query: 328 QYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHN 387
+ +L++GTP + EL+ L L PD++ N ++ + + G ++LH
Sbjct: 274 RNRMLITGTPLQNNLHELWALLNFLLPDIFSNAQDFDDWFSNEGSEDDQDKVV--KQLHT 331
Query: 388 LMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA---EKDMRQIYALFRELEVVKGKIKACK 444
+++ ++RR+K +V L K+ V++ ++ +K +QI L ++++ V +
Sbjct: 332 VLQP-FLLRRIKSEVETSLLPKKELNVYVGMSTMQKKWYKQI--LEKDIDAVNASSGNKE 388
Query: 445 SEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCK 488
S+ + ++ + N Y D AE P D L+ E G +
Sbjct: 389 SKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNSAKLKVLDKLLKKFKEEGSR 448
Query: 489 FLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKA 547
LIF+ +LD + + + RIDG T R + ++ D K +L+ +A
Sbjct: 449 VLIFSQMSRLLDIMEDYCYFRNYNYCRIDGSTAHEDRIQAIDDYNAPDSDKFLFLLTTRA 508
Query: 548 GGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVV 607
GG+G+ LT+A VI + W P +QA DRAHRIGQ V V+ L+ +++V++ + +
Sbjct: 509 GGLGINLTSADVVILFDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKIIERA 568
Query: 608 RSKL 611
KL
Sbjct: 569 TQKL 572
>gi|398021687|ref|XP_003864006.1| transcription activator [Leishmania donovani]
gi|322502240|emb|CBZ37323.1| transcription activator [Leishmania donovani]
Length = 1103
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 220/490 (44%), Gaps = 73/490 (14%)
Query: 165 QIPAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDV----W 217
+ P++I KL P+Q +GV + L G +LADEMGLGKT Q IA +
Sbjct: 157 ETPSYIRGKLRPYQIEGVNWLLGLFSRGVNGILADEMGLGKTFQTIATIAYLKFTVGMPG 216
Query: 218 PVLILTPSSLRLHWAAMIQQWL------------NIPPSEIVVVLSQLGGSNRSGFTIVS 265
P L++ P S+ +W + W +I PS +V + L ++R + ++
Sbjct: 217 PHLVVCPKSVMGNWYREFKHWCPGLLVYKFHASSDIRPS---IVKAHLHPTDRIKYDVI- 272
Query: 266 SNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK 325
+ ++++VL N+ ++ +I DE+H LKN + + A +
Sbjct: 273 --------------LTTFEMVLDELNLFKRIAWQYLIVDEAHKLKNEEGRAHTALDSL-- 316
Query: 326 KAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEEL 385
+ + L+++GTP + EL+ L L P ++ + + F G + +
Sbjct: 317 QTSHRLIITGTPLQNNLRELWALLHFLAPRLFNDSESFDT------WFDTTSGQQDANVM 370
Query: 386 HNLMK--ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKIK 441
NL K A +MIRRLK DV +P K+ V +++K R+ Y L ++ EV+ K
Sbjct: 371 SNLHKILAPLMIRRLKADVSTGIPPKKEIYVSCQLSKK-QREWYMNVLAKDAEVLN---K 426
Query: 442 ACKSEEEVQSLKFTEKNLINKIY-TDSAEAKIPAVLD------------------YLETV 482
A S + ++ + + +IN Y D E P V D L
Sbjct: 427 AGGSVASLTNVMMSLRKVINHPYLMDGGEEGPPFVTDEKLVRTSGKMIILDKLLHRLRAD 486
Query: 483 IEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAA 541
++ K LIF+ ML+ + + RIDG T R + + F D
Sbjct: 487 VQGKHKVLIFSQFTSMLNILEDYCNMRGFMYCRIDGNTSGYDRDSQMASFNSPSSDYFIF 546
Query: 542 VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 601
+LS +AGG+G+ L AA+ VI + W P +QA+DRAHRIGQ SV VY + + T+++
Sbjct: 547 LLSTRAGGLGINLQAANHVILYDSDWNPQMDLQAQDRAHRIGQKRSVRVYRFVTDGTLEE 606
Query: 602 IVWDVVRSKL 611
++ KL
Sbjct: 607 KMYRRALKKL 616
>gi|196008026|ref|XP_002113879.1| hypothetical protein TRIADDRAFT_27056 [Trichoplax adhaerens]
gi|190584283|gb|EDV24353.1| hypothetical protein TRIADDRAFT_27056, partial [Trichoplax
adhaerens]
Length = 871
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 226/504 (44%), Gaps = 71/504 (14%)
Query: 159 LREKYDQIPAHIE---SKLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VAT 211
LR KYD+ P I L +Q +G+ RF+ +LADEMGLGKTIQAI+ + +
Sbjct: 241 LRRKYDEQPDFISKTGGTLHAYQLEGLNWLRFSWAEETDTILADEMGLGKTIQAISFLNS 300
Query: 212 CFRD---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG------------- 255
F + P LI P S ++W + W P+ + V+S +G
Sbjct: 301 LFMENHCKGPFLISVPLSTVVNWEREFEMW---APN--LYVVSYVGDKDCRKVIREHEFY 355
Query: 256 ----SNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKN 311
S+ G V K + L + SY+++ IL S ++K++I DE+H LKN
Sbjct: 356 RDEQSDSKGNKAVKPKKKSFLKFHVL--LTSYELITIDAPILQSIDWKVLIVDEAHRLKN 413
Query: 312 AQAK--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCK 369
Q+K R ++ K Y LLL+GTP + EL+ L L PD + + ++ ++
Sbjct: 414 NQSKFFRVLSSY----KLGYKLLLTGTPLQNNLEELWNLLNFLSPDRFNSWQDFSMKF-- 467
Query: 370 GGVFGIYQGASNHEELHNL--MKATVMIRRLKKDVLAQLPVKRRQQVFLDVAE-KDMRQI 426
+ S +++ L + ++RR+K DV+ +P K V +D+ +
Sbjct: 468 -------EDISKEDQIKKLNELLGPHLLRRMKADVMKGIPEKSEVIVRIDLTSMQKTYYK 520
Query: 427 YALFRELEVVKGK--------------IKACKSEEEVQSLKFTEKNLINKIYTDS----A 468
Y L R E + + K C + S I+ Y S A
Sbjct: 521 YILTRNFEALNSRGNKHVSLSNIVMELKKCCNHPYLIPSASEDAPTNIDGTYHLSPLVQA 580
Query: 469 EAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQAL 528
K+ + L+ + E G + LIF+ MLD + RIDG T RQAL
Sbjct: 581 CGKLIVLEKMLKKLKETGNRVLIFSQMTKMLDILEDFLDGLNYEYERIDGSTSGNERQAL 640
Query: 529 VTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSS 587
+ +F + + +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ +
Sbjct: 641 IDKFNAPNATQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQSNK 700
Query: 588 VNVYYLLANDTVDDIVWDVVRSKL 611
V +Y + +V++ + V + K+
Sbjct: 701 VMIYRFVTRFSVEERITQVAKKKM 724
>gi|333896052|ref|YP_004469926.1| SNF2-related protein [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111317|gb|AEF16254.1| SNF2-related protein [Thermoanaerobacterium xylanolyticum LX-11]
Length = 1065
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 230/486 (47%), Gaps = 60/486 (12%)
Query: 165 QIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVW-- 217
++P + L +Q G ++ + GG +LAD+MGLGKTIQ IA ++
Sbjct: 595 EVPKKLNGVLRKYQEVGFKWLKTLSSYGFGG--ILADDMGLGKTIQTIAFLLDEKEKHKE 652
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
P +++ P++L +W + IQ++ PS +V+S GS +++ S + ++
Sbjct: 653 PAIVICPTTLIYNWESEIQKF---APSLKTLVVS---GSKSERGSLIKSIEESDVV---- 702
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
I SY ++ + + F I DE+ +KN +++ + I K +AL +GTP
Sbjct: 703 --ITSYPLIRRDIESYENIEFSYCILDEAQHIKNPKSQNAESVKRIKAKGYFAL--TGTP 758
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT--VMI 395
+ EL+ + L P + ++ +Y K V N E L++L K ++
Sbjct: 759 IENSLTELWSIFDFLMPGYLLSHRKFVEKYEKPIV-----RYKNEEALNDLSKHIRPFIL 813
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLKKDVL +LP K F ++ K+ +++Y + LE K +I EEE+++ F
Sbjct: 814 RRLKKDVLKELPTKIETTSFAELT-KEQKELYMAY--LENAKTEI-----EEEIRNKGFE 865
Query: 456 EKNLINKIYT-------------------DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQ 496
+ KI T K+ +++ ++ + E+G + LIF+
Sbjct: 866 RSQI--KIITALTRLRQICCHPSMFVENYKGTSGKMELLMELIQELKESGHRALIFSQFT 923
Query: 497 PMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTA 556
L I K+K+ + +DG T R LV F K D ++S+KAGG GL L
Sbjct: 924 TALKLIEDNLKKEKISYLYLDGDTKTKERGELVKAFN-KGDSDVFLISLKAGGTGLNLIG 982
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A TVI + W P QA DRAHRIGQV++V V L+ T+++ + + K E +
Sbjct: 983 ADTVIHFDPWWNPAIEDQATDRAHRIGQVNTVQVIKLITQGTIEEKIVKLQEKKKEMINS 1042
Query: 617 VLDGHE 622
V++ E
Sbjct: 1043 VINPGE 1048
>gi|332306037|ref|YP_004433888.1| SNF2-related protein [Glaciecola sp. 4H-3-7+YE-5]
gi|332173366|gb|AEE22620.1| SNF2-related protein [Glaciecola sp. 4H-3-7+YE-5]
Length = 1440
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 229/481 (47%), Gaps = 35/481 (7%)
Query: 166 IPAHIESKLLPFQRDGVRFA--LQH-GGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
IP+ +++L +Q G +A L H G LAD+MGLGKT+QA+A+ + P L++
Sbjct: 965 IPSTFQAQLRDYQLVGFDWASRLAHWGAGACLADDMGLGKTLQALAILLSRANEGPSLVI 1024
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+S+ +W Q+ L P+ + V + +N ++ S P D + IIS
Sbjct: 1025 APTSVCFNWQ---QEALKFAPTLNIKVFA--DSTNTIAREVLLSELG---PFDCV--IIS 1074
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
Y ++ + IL ++ ++ADE+ LKN AKRT A + K+ + ++ +GTP +
Sbjct: 1075 YGLLQRESEILKKVHWHSIVADEAQALKNPLAKRTKAAYAL--KSDFKMITTGTPIENNL 1132
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYC---KGGVFGIYQGASNHEELHNLMKATVMIRRLK 399
EL+ + P + N+ + R+ + + L L++ ++ RR+K
Sbjct: 1133 TELWSLFRFINPGLLGNIKRFAQRFSLPIENAQEDPLAARKASQALKTLIQPFIL-RRMK 1191
Query: 400 KDVLAQLPVKRRQQVFLDVA--EKDMRQIYALFRELEVVKGKIKACKSEEEVQSL----K 453
VL +LP + + ++++ E+D + L + + A SE+ ++ L K
Sbjct: 1192 NQVLTELPSRTEINIRVEMSSQERDFYEALRLNAIDNINQSGQHANASEQRIRMLAELVK 1251
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKF-----LIFAHHQPMLDAIHQLFLK 508
+ K+ AE IP+ + K LIF+ L I Q
Sbjct: 1252 LRQACCNPKLVM--AETTIPSAKLAALDALLEELKLNNHKALIFSQFVGHLQLIKQHLED 1309
Query: 509 KKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAAVLSMKAGGVGLTLTAASTVIFAELSW 567
K +DG TP RQA V FQ + D+ ++S+KAGG GL LTAA VI + W
Sbjct: 1310 KGFDYQYLDGSTPQKQRQASVNAFQRGQGDI--FLISLKAGGSGLNLTAADYVIHMDPWW 1367
Query: 568 TPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
P QA DRAHRIGQ+ V +Y L+ +T+++ + + + K + +L G+E S ++
Sbjct: 1368 NPAVEEQASDRAHRIGQLRPVTIYRLITQNTIEEKIVALHKQKRDLADNLLAGNEASAKL 1427
Query: 628 S 628
S
Sbjct: 1428 S 1428
>gi|91081375|ref|XP_972116.1| PREDICTED: similar to helicase [Tribolium castaneum]
gi|270005181|gb|EFA01629.1| hypothetical protein TcasGA2_TC007199 [Tribolium castaneum]
Length = 1011
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 252/513 (49%), Gaps = 59/513 (11%)
Query: 149 AIASASAAPDLREKYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTI 204
A ++A A P +R ++ P I++ ++ +Q G+ + + ++G +LADEMGLGKT+
Sbjct: 100 AESNAKAKPTIR--FEASPPFIKNGEMRDYQIRGLNWMVSLYENGINGILADEMGLGKTL 157
Query: 205 QAIAVATCFRDV----WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-RS 259
Q I++ + P +++ P S +W ++W PS V L +G R+
Sbjct: 158 QTISLLGFMKHYKNTPSPHIVIVPKSTLANWMNEFKKWC---PSIRAVCL--IGDQEARN 212
Query: 260 GFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRT 317
F R++ + G +++ SY++V+K +++ N++ ++ DE+H +KN ++K +
Sbjct: 213 AFI-------RDVMMPGDWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLS 265
Query: 318 AATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQ 377
K LLL+GTP + EL+ L L PDV+ + ++ + G Q
Sbjct: 266 EILREF--KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDAWFNTNQCLGDNQ 323
Query: 378 GASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEV 435
E LH ++K ++RRLK +V +L K+ +V++ ++ K R+ Y L ++++V
Sbjct: 324 LV---ERLHAVLKP-FLLRRLKSEVEKKLKPKKELKVYVGLS-KMQREWYTKVLMKDIDV 378
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YL 479
V G K K +Q++ + N Y D AE P D L
Sbjct: 379 VNGAGKVEKMR--LQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVYNCGKMVLLDKLL 436
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
+ E + LIF+ MLD + ++ + R+DG TP RQ + E+ E + K
Sbjct: 437 PKLKEQDSRVLIFSQMTRMLDILEDYCHWRQYNYCRLDGQTPHEDRQRQINEYNEPNSSK 496
Query: 540 AA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ V V+ L+ +T
Sbjct: 497 FIFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENT 556
Query: 599 VDDIVWDV--VRSKLENL----GQVLDGHENSL 625
V++ + + V+ +L+ L G+++D SL
Sbjct: 557 VEEKIVERAEVKLRLDKLVIQQGRLIDNKSQSL 589
>gi|302345308|ref|YP_003813661.1| SNF2 family N-terminal domain protein, partial [Prevotella
melaninogenica ATCC 25845]
gi|302150135|gb|ADK96397.1| SNF2 family N-terminal domain protein [Prevotella melaninogenica ATCC
25845]
Length = 1343
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 249/497 (50%), Gaps = 38/497 (7%)
Query: 145 LVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRF---ALQHGGRILLADEMGLG 201
L QR A + +P +P ++++L +Q++G + G + LAD+MGLG
Sbjct: 868 LRQRIEACSKKSP-------VVPKTLQAQLRDYQQEGFEWMSRTTSWGAGVCLADDMGLG 920
Query: 202 KTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
KTIQ I + + LI+ P+S+ +W +Q++ P+ + +L+Q +RS
Sbjct: 921 KTIQTITLLLEQSENGASLIVAPASVVPNWRNELQRF---APTLNLTILNQ--SEDRSKD 975
Query: 262 TIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATL 321
+ I GL NI Q+ L + +V DE+H +KNA K + A +
Sbjct: 976 IKEAKAGDVIITTYGLLNI--------QQDDLTGREWNVVCLDEAHTIKNANTKMSKAAM 1027
Query: 322 PIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASN 381
+ KAQ+ ++L+GTP + EL+ + + P + + ++ ++ + I +G ++
Sbjct: 1028 LL--KAQHKVILTGTPIQNHLAELWNLFQFINPGLLGSAEQFRKKF----ILPI-EGDND 1080
Query: 382 HEELHNLMK--ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELE--VVK 437
L + + ++RR K +V+ +LP K ++ ++++ ++M RE E +++
Sbjct: 1081 KARQSQLRRLISPFLLRRTKAEVIDELPAKNEIKLPVELSSEEMAMYEVKRRETEAKILE 1140
Query: 438 GKIKACKSEEEVQSLK--FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHH 495
K + E+ L+ +L++K + + +K+ A +D E++ ++ + L+F+
Sbjct: 1141 NKADKVSTLAELTHLRQMACSCSLVDKKWKLPS-SKVLAFIDLAESLNDSDNRALVFSQF 1199
Query: 496 QPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLT 555
+ + + K K+ + +DG T A R+ LV EFQ ++S+KAGG+GL LT
Sbjct: 1200 TSFFEEVRKAMDKAKLPYLYLDGSTSMAMREKLVKEFQ-TGKCPFFLISLKAGGLGLNLT 1258
Query: 556 AASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLG 615
A+ V+ + W P QA DRA+RIGQ V VY+L++ T+++ + + ++K
Sbjct: 1259 GANYVVHLDPWWNPAIEQQATDRAYRIGQQQDVTVYHLISQHTIEEKILRLHKTKRNLSD 1318
Query: 616 QVLDGHENSLEVSSSQI 632
+L+G + S ++ ++
Sbjct: 1319 SLLEGSDISHAMTQEEL 1335
>gi|419813786|ref|ZP_14338597.1| superfamily II DNA/RNA helicase [Streptococcus sp. GMD2S]
gi|404472580|gb|EKA16999.1| superfamily II DNA/RNA helicase [Streptococcus sp. GMD2S]
Length = 1031
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 227/482 (47%), Gaps = 54/482 (11%)
Query: 169 HIESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FRDVWPVLIL 222
+++ L +Q GVR+ L H GG +LAD+MGLGKT+Q IA T + VLIL
Sbjct: 577 QVQASLRDYQEKGVRWLQMLHHYGFGG--ILADDMGLGKTLQTIAFLTSQVTEDSRVLIL 634
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PS L +WA +++ P ++ VV +NR I+S N + + S
Sbjct: 635 APSGLIYNWADEFRKF--APQLDLAVVHGL--KANREA--ILSENHQ--------IYVTS 680
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
Y + + F + DE+ +KNAQ K + + A +AL SGTP +
Sbjct: 681 YATFRQDSELYQEMAFDFLFLDEAQVMKNAQTKIAQSLRQFVVPAVFAL--SGTPIENHL 738
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDV 402
EL+ + + P + + E+ + + +K VM RR K++V
Sbjct: 739 GELWSIFQIVLPGLLPSKKEFMKLPA--------------DRVAQFIKPFVM-RRKKEEV 783
Query: 403 LAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE------EVQSLKFTE 456
L +LP + V+ + E + IY +L+ ++ ++ +E E+ S
Sbjct: 784 LTELP-DLIEVVYKNELEDQQKAIY--LAQLQQMRDRLAQVTDQEFQRSRVEILSGLMRL 840
Query: 457 KNLINK--IYTD---SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKV 511
+ + + ++ D A K+ ++ D L V + G + LIF+ + ML+ I Q +
Sbjct: 841 RQICDTPALFMDDYQGASGKLDSLRDLLLQVADGGHRVLIFSQFKGMLEKIEQELPDLGL 900
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
+I G TP RQ + F + + A ++S+KAGGVGL LT A TVI +L W P
Sbjct: 901 TSFKITGSTPAHDRQEMTKAFNQGER-DAFLISLKAGGVGLNLTGADTVILVDLWWNPAV 959
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ 631
QA RAHR+GQ V VY L+ T+++ + ++ K + QVLDG E+ +S ++
Sbjct: 960 EAQAIGRAHRMGQEQKVEVYRLITKGTIEEKIQELQEQKKHLVSQVLDGTESRASLSLAE 1019
Query: 632 IR 633
IR
Sbjct: 1020 IR 1021
>gi|109898913|ref|YP_662168.1| hypothetical protein Patl_2599 [Pseudoalteromonas atlantica T6c]
gi|109701194|gb|ABG41114.1| SNF2-related protein [Pseudoalteromonas atlantica T6c]
Length = 1437
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 237/485 (48%), Gaps = 43/485 (8%)
Query: 166 IPAHIESKLLPFQRDGVRFA--LQH-GGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
IP+ +++L +Q G +A L H G LAD+MGLGKT+QA+A+ P L++
Sbjct: 962 IPSTFQAQLRDYQLVGFDWASRLAHWGAGACLADDMGLGKTLQALAILLSRASDGPSLVI 1021
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNT-KRNIPLD--GLFN 279
P+S+ +W Q+ L P+ + + + S+NT +R + L+ G F+
Sbjct: 1022 APTSVCFNWQ---QEALKFAPTLNIKLFAD------------STNTLQREMLLNDLGPFD 1066
Query: 280 --IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
IISY ++ + IL ++ ++ADE+ LKN AKRT A + K+ + ++ +GTP
Sbjct: 1067 CVIISYGLLQRESEILKGVHWHSIVADEAQALKNPLAKRTKAACAL--KSDFKMITTGTP 1124
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV---M 394
+ EL+ + P + N+ +G R+ + ++ + +K + +
Sbjct: 1125 IENNLTELWSLFRFINPGLLGNIKRFGQRFSVP-IENAHEDPLAARKASQALKVLIQPFI 1183
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVA--EKDMRQIYALFRELEVVKGKIKACKSEEEVQSL 452
+RR+K VL +LP + + ++++ E+D + L + + +A E+ ++ L
Sbjct: 1184 LRRMKNQVLTELPSRTEINIRVEMSAQERDFYEALRLNAIDNISQSGQQANAGEQRIRML 1243
Query: 453 ----KFTEKNLINKIYTDSAEAKIPAV-----LDYLETVIEAGCKFLIFAHHQPMLDAIH 503
K + K+ AE IP+ + LE + K LIF+ L I
Sbjct: 1244 AELVKLRQACCNPKLVM--AETTIPSAKLAALDELLEELKLNNHKALIFSQFVGHLQLIK 1301
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
Q K +DG TP RQA V FQ + + ++S+KAGG GL LTAA VI
Sbjct: 1302 QHIEAKGFSYQYLDGSTPQKQRQASVNAFQ-RGEGDIFLISLKAGGSGLNLTAADYVIHM 1360
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
+ W P QA DRAHRIGQ+ V +Y L+ +T+++ + + + K + +L+G+E
Sbjct: 1361 DPWWNPAVEEQASDRAHRIGQLRPVTIYRLVTRNTIEEKIVSLHQHKRDLADTLLEGNEA 1420
Query: 624 SLEVS 628
+ ++S
Sbjct: 1421 ATKLS 1425
>gi|157875048|ref|XP_001685931.1| putative DNA-dependent ATPase [Leishmania major strain Friedlin]
gi|68129004|emb|CAJ06440.1| putative DNA-dependent ATPase [Leishmania major strain Friedlin]
Length = 1103
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 220/490 (44%), Gaps = 73/490 (14%)
Query: 165 QIPAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDV----W 217
+ P++I KL P+Q +GV + L G +LADEMGLGKT Q IA +
Sbjct: 157 ETPSYIRGKLRPYQIEGVNWLLGLFARGVNGILADEMGLGKTFQTIATIAYLKFTVGMPG 216
Query: 218 PVLILTPSSLRLHWAAMIQQWL------------NIPPSEIVVVLSQLGGSNRSGFTIVS 265
P L++ P S+ +W + W +I PS +V + L ++R + ++
Sbjct: 217 PHLVVCPKSVMGNWYREFKHWCPGLLVYKFHASSDIRPS---IVKAHLHPTDRIKYDVI- 272
Query: 266 SNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK 325
+ ++++VL N+ ++ +I DE+H LKN + + A +
Sbjct: 273 --------------VTTFEMVLDELNLFKRIAWQYLIVDEAHKLKNEEGRAHTALDSL-- 316
Query: 326 KAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEEL 385
+ + L+++GTP + EL+ L L P ++ + + F G + +
Sbjct: 317 QTSHRLIITGTPLQNNLKELWALLHFLAPRLFNDSESFDT------WFDTTSGQQDANVM 370
Query: 386 HNLMK--ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKIK 441
NL K A +MIRRLK DV +P K+ V +++K R+ Y L ++ EV+ K
Sbjct: 371 SNLHKILAPLMIRRLKADVSTGIPPKKEIYVSCQLSKK-QREWYMNVLAKDAEVLN---K 426
Query: 442 ACKSEEEVQSLKFTEKNLINKIY-TDSAEAKIPAVLD------------------YLETV 482
A S + ++ + + +IN Y D E P V D L
Sbjct: 427 AGGSVASLTNVMMSLRKVINHPYLMDGGEEGPPFVTDEKLVRTSGKMVILDKLLHRLRAD 486
Query: 483 IEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAA 541
++ K LIF+ ML+ + + RIDG T R + + F D
Sbjct: 487 VQGRHKVLIFSQFTSMLNILEDYCNMRGFMYCRIDGNTSGYDRDSQMASFNSPSSDYFIF 546
Query: 542 VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 601
+LS +AGG+G+ L AA+ VI + W P +QA+DRAHRIGQ SV VY + + T+++
Sbjct: 547 LLSTRAGGLGINLQAANHVILYDSDWNPQMDLQAQDRAHRIGQKRSVRVYRFVTDGTLEE 606
Query: 602 IVWDVVRSKL 611
++ KL
Sbjct: 607 KMYRRALKKL 616
>gi|410989353|ref|XP_004000926.1| PREDICTED: probable global transcription activator SNF2L1 isoform 3
[Felis catus]
Length = 1069
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 235/483 (48%), Gaps = 65/483 (13%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 198 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWV--- 254
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 255 PS--VRVICFVGDKDARAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 305
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 306 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 363
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 364 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 419
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 420 -KMQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 476
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 477 DEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTP 536
Query: 522 PASRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWT 568
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W
Sbjct: 537 HEEREDKFLEVELLGQREAIEAFNVPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWN 596
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHE 622
P +QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D
Sbjct: 597 PQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQS 656
Query: 623 NSL 625
N L
Sbjct: 657 NKL 659
>gi|301776989|ref|XP_002923917.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like
[Ailuropoda melanoleuca]
Length = 1948
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 222/498 (44%), Gaps = 63/498 (12%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 683 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 742
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 743 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 799
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKR 316
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q K
Sbjct: 800 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQPKS 857
Query: 317 TAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIY 376
L K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 858 FFRVLNSYK-IDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FADI 910
Query: 377 QGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---REL 433
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 911 SKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTRNF 967
Query: 434 EVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVLDY 478
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 968 EALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLML 1027
Query: 479 LETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE 534
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1028 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 1087
Query: 535 KDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYL 593
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1088 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1147
Query: 594 LANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1148 VTRASVEERITQVAKRKM 1165
>gi|108885078|ref|NP_072678.2| SNF2 family helicase [Mycoplasma genitalium G37]
gi|94730430|sp|P47264.3|Y018_MYCGE RecName: Full=Uncharacterized ATP-dependent helicase MG018
gi|84626126|gb|AAC71234.2| helicase SNF2 family, putative [Mycoplasma genitalium G37]
gi|166078676|gb|ABY79294.1| helicase SNF2 family, putative [synthetic Mycoplasma genitalium
JCVI-1.0]
Length = 1031
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 224/463 (48%), Gaps = 43/463 (9%)
Query: 172 SKLLPFQRDGVRF--AL---QHGGRILLADEMGLGKTIQAI-AVATCF---RDVWPVLIL 222
+ L +Q++GV++ AL Q GG +LADEMGLGKT Q I A+ + + + P LI+
Sbjct: 576 NNLRKYQKEGVKWIRALEDNQFGG--ILADEMGLGKTAQVIFAMLDSYQSTKSLLPSLII 633
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+SL L+W + Q++ P +IV N + V + K I L FN++
Sbjct: 634 VPASLLLNWKSEFQKF--APHVKIVT-----ANGNFKERSQVYESLKNQILLMS-FNVLR 685
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
D+ + F V+ DE+ +KN + T A I K + L L+GTP +R
Sbjct: 686 SDI-----KWISQKKFHYVVIDEAQGIKNENSTVTKAAKKI--KGNFCLALTGTPIENRL 738
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT--VMIRRLKK 400
++L+ + + P+ N ++ +++ + N E LMK T ++RR K
Sbjct: 739 LDLWSCFDFVLPNFLGNKKQFSDQF---------EKEKNDESFQKLMKKTSPFILRRTKN 789
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLI 460
VL +LP K ++++++E + +++Y + + + K K+ + SL +++
Sbjct: 790 KVLKELPKKIITDIYVELSE-EHQKLYDKQKTDGLKEIKESDAKNALNILSLILKLRHIC 848
Query: 461 -----NKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
N + +K A L+ + +E K ++F ++D Q +K+ +
Sbjct: 849 SLVKDNDVNDFEDNSKANAALNIIYEALENKRKVILFTQFLDVIDCFKQTLKNQKIDHLV 908
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
DG +R ++ +F + + S+KAGGVG+ LTAA VI ++ W QA
Sbjct: 909 FDGRKTVKNRNTIIQKFNSAKEPCVMLASLKAGGVGINLTAAEVVIHFDVWWNSAVENQA 968
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
DRAHRIGQ +V VY ++A +T+++ V V K E + + L
Sbjct: 969 TDRAHRIGQSKTVQVYRIIAKNTIEERVCQVQNQKQELVKKTL 1011
>gi|355676670|ref|ZP_09060166.1| hypothetical protein HMPREF9469_03203 [Clostridium citroniae
WAL-17108]
gi|354813259|gb|EHE97870.1| hypothetical protein HMPREF9469_03203 [Clostridium citroniae
WAL-17108]
Length = 1052
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 133/469 (28%), Positives = 220/469 (46%), Gaps = 48/469 (10%)
Query: 166 IPAHIESKLLPFQRDG---VRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW----- 217
+P L +QR G ++ +G +LAD+MGLGKT+Q I T D +
Sbjct: 575 VPKAQRGVLREYQRVGYCWLKTLDSYGFGGILADDMGLGKTLQII---TLLEDAYEGGEQ 631
Query: 218 -PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDG 276
P LI+ P+SL +W I ++ P V+ + G VS + R
Sbjct: 632 QPSLIVCPASLVYNWEHEIGKF---APELKVLSIVGNGPEREEKLKAVSRSRDR------ 682
Query: 277 LFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
FN++ SYD++ + F+ + DE+ ++KNA + A I K ++AL +
Sbjct: 683 -FNVLVTSYDLLKRDMACYQEIRFRYQVIDEAQYIKNAATQSAKAVKSIDVKTRFAL--T 739
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK--AT 392
GTP +R EL+ + L P +G++Y K + + L L +
Sbjct: 740 GTPVENRLSELWSIFDYLMPGFL-----FGSQYFKKEYETPIVKEGDEDALLRLRRIIGP 794
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-----LFRELE------VVKGKIK 441
++RR+K+DVL +LP K Q V+ + E + +++Y L +LE +GK++
Sbjct: 795 FVLRRVKRDVLKELPEKLEQVVYSNF-EDEQKKLYTANAVQLKEKLESGGFAQAGEGKLQ 853
Query: 442 ACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDA 501
++ + + L + Y + + AK+ +D + + K L+F+ ML+
Sbjct: 854 ILAELMRLRQI-CCDPRLCYENYRNGS-AKLETCMDLIRRGVSGEHKILLFSQFTSMLEL 911
Query: 502 IHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVI 561
+ LK+ + C ++ G T R +V EFQ +DDV ++S+KAGG GL LTAA VI
Sbjct: 912 VEARLLKEDIKCHKLTGSTSKEDRIRMVGEFQ-RDDVPVFLISLKAGGTGLNLTAADIVI 970
Query: 562 FAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
+ W QA DR HRIGQ V VY L+ +T+++ + + SK
Sbjct: 971 HYDPWWNVAAQNQATDRTHRIGQEKQVTVYKLITRNTIEENILKLQESK 1019
>gi|307180140|gb|EFN68184.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
[Camponotus floridanus]
Length = 1960
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 144/503 (28%), Positives = 229/503 (45%), Gaps = 68/503 (13%)
Query: 158 DLREKYDQIPAHIES---KLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VA 210
DL++KY++ P +++ +L P+Q +G+ R++ G +LADEMGLGKTIQ I +
Sbjct: 699 DLKKKYERQPEYLDQTGMQLHPYQLEGLNWLRYSWGQGIDTILADEMGLGKTIQTITFLY 758
Query: 211 TCFRD---VWPVLILTPSSLRLHWAAMIQQW---------LNIPPSEIVVVLSQLG---G 255
+ +++ P L+ P S ++W + W + S IV+ ++L G
Sbjct: 759 SLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDKDSRIVIRENELSFEEG 818
Query: 256 SNRSGFT--IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQ 313
+ RSG I SS+ K N+ L SY+++ L S ++ +++ DE+H LK+ Q
Sbjct: 819 AVRSGRASKIRSSSIKFNVLL------TSYELISIDSACLGSIDWAVLVVDEAHRLKSNQ 872
Query: 314 AK--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGG 371
+K R A+ I Y LLL+GTP + ELF L L D + ++ + N +
Sbjct: 873 SKFFRLLASYNIA----YKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLAAFQNEFAD-- 926
Query: 372 VFGIYQGASNHEELHNL--MKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI-YA 428
S E++ L M M+RRLK DVL +P K V ++++ + Y
Sbjct: 927 -------ISKEEQVKKLHEMLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYI 979
Query: 429 LFRELEVVKGK---------------IKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIP 473
L R E + K K C + N Y SA K
Sbjct: 980 LTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAASQEAPTGPNGSYETSALIKAA 1039
Query: 474 AVLDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALV 529
L L ++ + G + LIF+ MLD + + RIDG + RQ +
Sbjct: 1040 GKLVLLSKMLKKLRDDGHRVLIFSQMTKMLDILEDYLEGEGYKYERIDGNITGSQRQEAI 1099
Query: 530 TEFQEKDDVK-AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSV 588
F + +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ + V
Sbjct: 1100 DRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKV 1159
Query: 589 NVYYLLANDTVDDIVWDVVRSKL 611
+Y + ++V++ V V + K+
Sbjct: 1160 MIYRFVTRNSVEERVTQVAKRKM 1182
>gi|418068092|ref|ZP_12705410.1| SNF2-related protein [Geobacter metallireducens RCH3]
gi|373557616|gb|EHP84016.1| SNF2-related protein [Geobacter metallireducens RCH3]
Length = 1149
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 224/487 (45%), Gaps = 64/487 (13%)
Query: 166 IPAHIESKLLPFQRDG---VRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW----- 217
+P +++ L +Q D + F H LAD+MGLGKTIQAI++ +
Sbjct: 682 LPERLQATLRHYQVDAFHWLAFLYTHRFGACLADDMGLGKTIQAISLLAALHEGTLPSRV 741
Query: 218 ----PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P LI+ P SL +W + ++ P+ VL+ G + FT V
Sbjct: 742 PEPRPHLIVVPPSLLFNWENELARFY---PA--FTVLTYRGTGRSADFTGVD-------- 788
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
+ SY ++ + IL F ++ DE+ +KN QA T A + + + L L
Sbjct: 789 ----IVLTSYGIIPRDIGILAEIPFHCIVFDEAQAVKNIQADTTGACRRL--RGAFTLCL 842
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT- 392
+GTP + E F ++ P + + E+ + G + L L++ T
Sbjct: 843 TGTPVENHLGEYFSVMDLAVPGLLGSYEEFRRQ----------AGNAAAPFLETLVRRTR 892
Query: 393 -VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE------LEVVKGK------ 439
++RR K+ + A+LP K ++L++ + + +Y E LE +GK
Sbjct: 893 PFVLRRSKQMIAAELPPKIETDIYLELTPRQ-KALYTRTVEEVRETVLEAWRGKSPGQAR 951
Query: 440 IKACKSEEEVQSLKFTEKNLINKIYTDSAEA--KIPAVLDYLETVIEAGCKFLIFAHHQP 497
I A + ++ L + + LI DS E K+ +++ LE + G L+F+
Sbjct: 952 IIALTAILRLRQLCLSPRLLI----ADSREPSPKVEFLVEQLEELFTEGHSVLVFSQFTS 1007
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
LD + ++ VH R+DG TP R+ LVT FQ+ D+ +LS+KAGG GL LT A
Sbjct: 1008 FLDIVEGELSRRGVHYYRLDGSTPVPERKRLVTAFQKGDEPSVFLLSLKAGGKGLNLTRA 1067
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
+ V + W P QA DRAHRIGQ V + L+ T+++ + ++ + KL+ +
Sbjct: 1068 TYVFHLDPWWNPAVENQASDRAHRIGQTRQVTITRLVMRHTIEEKMMELKKRKLKLYHAL 1127
Query: 618 LDGHENS 624
L+ ENS
Sbjct: 1128 LE--ENS 1132
>gi|357616571|gb|EHJ70266.1| hypothetical protein KGM_18078 [Danaus plexippus]
Length = 988
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 237/477 (49%), Gaps = 45/477 (9%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAV---ATCFR 214
+++ P +I++ ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ F+
Sbjct: 117 RFESSPPYIKNGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKNFK 176
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
+V P +++ P S +W ++W PS V L +G I + +P
Sbjct: 177 NVPGPHIVIVPKSTLTNWMNEFKKWC---PSLRAVCL--IGDQETRNIFIRETL----MP 227
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
+ I SY+++++ +++ N++ ++ DE+H +KN ++K + K+ LLL
Sbjct: 228 GNWDVCITSYEMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREF--KSMNRLLL 285
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV 393
+GTP + EL+ L L PDV+ + ++ + G Q S LH +++
Sbjct: 286 TGTPLQNNLHELWALLNFLLPDVFNSSDDFDAWFNTNAALGDNQLVS---RLHAVLRP-F 341
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEVQS 451
++RRLK +V +L K+ +V++ ++ K R+ Y L ++++VV G K K +Q+
Sbjct: 342 LLRRLKAEVEKKLKPKKELKVYIGLS-KMQREWYTKVLMKDIDVVNGAGKVEKMR--LQN 398
Query: 452 LKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLIFAHH 495
+ + N Y D AE P A+LD L + E + LIF+
Sbjct: 399 ILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKLAILDKLLPKLQEQESRVLIFSQM 458
Query: 496 QPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTL 554
MLD + L ++ R+DG TP R + E+ + K +LS +AGG+G+ L
Sbjct: 459 TRMLDILEDYCLWRQYKYCRLDGQTPHEDRNRQIEEYNAEGSEKFIFMLSTRAGGLGINL 518
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
T A VI + W P +QA DRAHRIGQ+ V V+ L+ +TV++ + + KL
Sbjct: 519 TTADVVIIYDSDWNPQMDLQAMDRAHRIGQMKQVRVFRLITENTVEEKIVERAEVKL 575
>gi|403417119|emb|CCM03819.1| predicted protein [Fibroporia radiculosa]
Length = 1096
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 223/478 (46%), Gaps = 42/478 (8%)
Query: 163 YDQIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATC---FRDV 216
+++ P+ + + +Q G+ + +L H G +LADEMGLGKT+Q IA + +R +
Sbjct: 181 FEESPSFVNGTMRSYQLQGLNWMVSLHHNGLNGILADEMGLGKTLQTIAFLSYLKHYRSI 240
Query: 217 -WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P LI+ P S +WA ++W P V+L+ G G I + R IP D
Sbjct: 241 SGPHLIVVPKSTLQNWAREFERWT---PDVNTVLLT--GTKEERGALIAN----RLIPQD 291
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
I SY++ L ++ L +F+ + DE+H +KN + + + + + LL++G
Sbjct: 292 FDVLITSYEICLIEKSALKKFSFEYIAIDEAHRIKNVDSILSQIVRSFMSRGR--LLITG 349
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNH---EELHNLMKAT 392
TP + ELF L + P+++ + + + K G + E LH +++
Sbjct: 350 TPLQNNMKELFALLNFICPEIFSDYADLDSFLHKDEAEGEGDDEKSKKVVEALHKILRP- 408
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKIKACKSEEEVQ 450
++RR+K DV L K+ +++ + E R+ Y L ++++ V G + + +
Sbjct: 409 FLLRRVKSDVEKNLLPKKEINIYVGLTEM-QRKWYRSVLEKDIDAVNGLTGKKEGKTRLM 467
Query: 451 SLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAH 494
++ + + Y D AE P D L+++ G + LIF+
Sbjct: 468 NMVMQLRKVTCHPYLFDGAEPGPPYTTDEHLVENSGKMVILDKLLQSMKAKGSRVLIFSQ 527
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLT 553
MLD + L + RIDGGT R + E+ + D K +L+ +AGG+G+
Sbjct: 528 MSRMLDILEDYCLFRGYKYCRIDGGTAHDDRIVAIDEYNKPDSEKFIFLLTTRAGGLGIN 587
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
LT A V+ + W P +QA DRAHRIGQ V V+ + +V++ + + KL
Sbjct: 588 LTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITEGSVEERMLERAAQKL 645
>gi|219121827|ref|XP_002181260.1| imitation switch isoform 1, alias nucleosome remodeling factor 140
kDa subunit [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407246|gb|EEC47183.1| imitation switch isoform 1, alias nucleosome remodeling factor 140
kDa subunit [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1023
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 235/498 (47%), Gaps = 80/498 (16%)
Query: 162 KYDQIPAHI--ESKLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRDV 216
+ DQ P+++ ++ P+Q +G+ + ++ HG +LADEMGLGKT+Q I++ R+
Sbjct: 135 RVDQQPSNLAPHCRMHPYQLEGLNWLIKLHDHGINGILADEMGLGKTLQTISLLAYLRES 194
Query: 217 WPV----LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNI 272
V +++ P S+ +W ++W PS + ++GG+ V+ + +
Sbjct: 195 RGVRGAHMVIVPKSVVGNWIREFKKWC---PS---IKAIRMGGTKDERQKFVTED----L 244
Query: 273 PLD-----GLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK 325
PLD F+++ SY+ +L+ + L +K VI DE+H +KN + + +
Sbjct: 245 PLDPNTGKRKFDVLVTSYEGLLREKGKLSRIPWKYVIIDEAHRIKNENSSLSKVVRTM-- 302
Query: 326 KAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE-- 383
K ++ LL++GTP + EL+ L L PD++ + ++ + AS E
Sbjct: 303 KTEFRLLITGTPLQNNLRELWALLNFLMPDIFGDAEQFDEWFS-------LTDASGKENV 355
Query: 384 --ELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIK 441
+LH +++ M+RR+KKDV LP K+ ++++ + + M+Q + + R L+
Sbjct: 356 IKKLHTILRP-FMLRRVKKDVATSLPPKKETKLYIGLTK--MQQEWYV-RCLQ------- 404
Query: 442 ACKSEEEVQSLKFTEKN-LINKIYT-----------DSAE---------------AKIPA 474
K E+ L ++N L+N + D AE K+
Sbjct: 405 --KDAHELNKLGGPDRNRLLNVLMQLRKVCNHPYLFDGAEQGPPYIDGPHLWENSGKMQL 462
Query: 475 VLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE 534
+ L + G + LIF +LD + F K+ RIDG T R + + EF
Sbjct: 463 MHKLLPKLQAKGSRVLIFCQMTRVLDILEDYFRLTKLEYCRIDGNTDGERRDSQMDEFNA 522
Query: 535 KDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYL 593
+ K A +LS +AGG+G+ L A VI + W P +QA DRAHRIGQ V V+
Sbjct: 523 EGSSKFAFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAMDRAHRIGQTKPVQVFRF 582
Query: 594 LANDTVDDIVWDVVRSKL 611
+ TV++ + + KL
Sbjct: 583 VTEGTVEEKIIERADRKL 600
>gi|410727353|ref|ZP_11365574.1| DNA/RNA helicase, superfamily II, SNF2 family [Clostridium sp.
Maddingley MBC34-26]
gi|410599081|gb|EKQ53640.1| DNA/RNA helicase, superfamily II, SNF2 family [Clostridium sp.
Maddingley MBC34-26]
Length = 1032
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 141/482 (29%), Positives = 229/482 (47%), Gaps = 76/482 (15%)
Query: 166 IPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
+P +L +Q G ++ L GG +LADEMGLGKTIQ IA + L
Sbjct: 574 LPDTFVGELRDYQMKGFKWFKTISELGFGG--ILADEMGLGKTIQTIAFLLSEKSK-RTL 630
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
I+ P+SL +W Q++ P E+++V G+ R ++ + N
Sbjct: 631 IVCPTSLIYNWKDEFQKF--APSLEVLIV----HGAQR---------------IETINNT 669
Query: 281 ISYDVVLKLQNIL-MSSN------FKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
YDV+L L + N F I DE +KNA A+ T I K ++AL
Sbjct: 670 RDYDVILTTYGTLRLDINYYEDIIFDYCIIDEGQNIKNASAQNTKVIKEIKAKTRFAL-- 727
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVF---GIYQGASNHEELHNLMK 390
+GTP + EL+ + + P G Y K VF I +G N E L L+K
Sbjct: 728 TGTPIENNLTELWSIFDFIMP---------GYLYSKE-VFIEKFISKGKDNLENLKLLIK 777
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQ 450
++ RR KK+V+ +LP K +++ +++ + +Y+ + ++ VK +K +E +++
Sbjct: 778 PFIL-RRTKKEVMKELPDKVEKKLLVEMT-ASQKALYSNY--IKRVKNVMKN-NNEGKIE 832
Query: 451 SLKFTEK--------NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAI 502
L + K +LI + Y + K+ +D ++ I +G K L+F+ LD I
Sbjct: 833 ILSYLTKLRQICLDPSLIVEDY-NGGSGKLEVAVDIIKEHIYSGNKVLLFSQFTSALDKI 891
Query: 503 HQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIF 562
+ K+++ + G T P R LV +F + K ++S+KAGG GL LT+A+ VI
Sbjct: 892 GERLNKEEIDFFHLQGSTRPKDRIKLVKDFNSSESAKVFLISLKAGGTGLNLTSANLVIH 951
Query: 563 AELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD-----------DIVWDVVRSKL 611
+ W P QA DRAHRIGQ + V V L+A T++ D++ D++ +L
Sbjct: 952 FDPWWNPAVEDQATDRAHRIGQENIVEVIRLVAKGTIEEKIILLQEDKKDLINDILTGEL 1011
Query: 612 EN 613
+N
Sbjct: 1012 QN 1013
>gi|392301095|gb|EIW12184.1| Isw1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1069
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 234/501 (46%), Gaps = 39/501 (7%)
Query: 162 KYDQIPAHIESKLLPFQRDGVRFALQ-HGGRI--LLADEMGLGKTIQAIAVATCFRDV-- 216
++ + PA++ +L P+Q GV + + H +I +LADEMGLGKT+Q I+ R +
Sbjct: 124 QFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEK 183
Query: 217 --WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P S +W I +W P + L G ++ K+ +
Sbjct: 184 IPGPFLVIAPKSTLNNWLREINRW--TPDVNAFI----LQGDKEERAELIQ---KKLLGC 234
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
D I SY+++++ ++ L N++ +I DE+H +KN ++ + + + LL++
Sbjct: 235 DFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNR--LLIT 292
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVM 394
GTP + EL+ L L PD++ + ++ + + ++LH +++ +
Sbjct: 293 GTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIV--KQLHTVLQP-FL 349
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF-RELEVVKGKIKACKSEEEVQSLK 453
+RR+K DV L K+ +++ ++ + + ++L+ V G + +S+ + ++
Sbjct: 350 LRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIM 409
Query: 454 FTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAHHQP 497
+ N Y D AE P D L+ + E G + LIF+
Sbjct: 410 MQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSR 469
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTA 556
+LD + + RIDG T R + ++ D K +L+ +AGG+G+ LT+
Sbjct: 470 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTS 529
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A V+ + W P +QA DRAHRIGQ V V+ L+ +++V++ + + KL
Sbjct: 530 ADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQL 589
Query: 617 VLDGHENSLEVSSSQIRSSPA 637
V+ + SL+ ++ S A
Sbjct: 590 VIQQNRTSLKKKENKADSKDA 610
>gi|302335213|ref|YP_003800420.1| SNF2-related protein [Olsenella uli DSM 7084]
gi|301319053|gb|ADK67540.1| SNF2-related protein [Olsenella uli DSM 7084]
Length = 1079
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 210/455 (46%), Gaps = 45/455 (9%)
Query: 167 PAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
PA + S L P+Q G ++ + GG +LADEMGLGK++Q I++ R L+
Sbjct: 615 PACLASVLRPYQVSGYQWLSALVDMGFGG--ILADEMGLGKSVQLISLLLARRGRGATLV 672
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
+ P+SL +W A ++ P ++ VV GS I + I
Sbjct: 673 VCPASLVYNWEAEFAKF--APQLDVAVV----AGSADERARIRGECGHEVL-------IT 719
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSR 341
SYD++ + +F DE+ ++KN + AT + + ++AL +GTP +R
Sbjct: 720 SYDLLRRDIEGYARLDFWCEALDEAQYIKNHETLVARATKAVHARHRFAL--TGTPIENR 777
Query: 342 PIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV---MIRRL 398
EL+ + L P + + + RY + + G EE+ ++A ++RRL
Sbjct: 778 LSELWSIFDYLMPGLLGSYDRFRERYEQPVLDG-------DEEVGACLRAATGPFVLRRL 830
Query: 399 KKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVV----------KGKIKACKSEEE 448
K+DVL LP K Q V+ +A + R A + L V +GKI+
Sbjct: 831 KRDVLNDLPEKLEQVVYARLAGEQRRLYQAHEQALRVSLSRQTDEAFGRGKIQVLAELMR 890
Query: 449 VQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLK 508
++ L + L + + AK+ V+D + +V+++ K L+F+ L I
Sbjct: 891 LRQLCCDPRLLYDDY--EGGSAKLATVMDLVGSVVDSSHKMLLFSQFTSYLSLIASELDA 948
Query: 509 KKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWT 568
+ V I G TP R L F D+ ++S+KAGG GL L AS V+ A+ W
Sbjct: 949 RGVRYYTITGATPKHRRLELADAFN-ADETPVFLISLKAGGTGLNLVGASVVVHADPWWN 1007
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIV 603
QA DRAHRIGQ V+VY ++A DT++D +
Sbjct: 1008 AAAQDQATDRAHRIGQTRDVSVYKVIAKDTIEDRI 1042
>gi|389742023|gb|EIM83210.1| hypothetical protein STEHIDRAFT_101315 [Stereum hirsutum FP-91666
SS1]
Length = 1095
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 227/479 (47%), Gaps = 44/479 (9%)
Query: 163 YDQIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDV--- 216
+++ P+ I + +Q G+ + +L H G +LADEMGLGKT+Q I+ +
Sbjct: 179 FEESPSFISGTMRSYQVQGLNWMVSLHHNGLNGILADEMGLGKTLQTISFLAYLKHQTNT 238
Query: 217 -WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P LI+ P S +WA QW P VVLS GS ++++ R I D
Sbjct: 239 PGPHLIVVPKSTLQNWAREFSQWT---PDVSTVVLS---GSKEERAELIAT---RLITQD 289
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
I SY++ L ++ L +F+ ++ DE+H +KN + + I + + LL++G
Sbjct: 290 FDVCITSYEICLIEKSALKKFSFEYIVIDEAHRIKNVDSILSQIVRSFISRGR--LLITG 347
Query: 336 TPALSRPIELFKQLEALYPDV---YKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
TP + ELF L + P++ Y ++ + ++ + G + E LH +++
Sbjct: 348 TPLQNNLKELFALLNFICPEIFSDYGDLESFLHKDEEAGDADEEKSKKVVEALHMILRP- 406
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY---ALFRELEVVKGKIKACKSEEEV 449
++RR+K DV L K+ +++ ++ DM++ + L ++++ V G + + +
Sbjct: 407 FLLRRVKSDVEKNLLPKKEINIYVGLS--DMQRKWYRSVLEKDIDAVNGLTGKKEGKTRL 464
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFA 493
++ + + Y D AE P D L+++ E G + LIF+
Sbjct: 465 MNMVMQLRKVTCHPYLFDGAEPGPPYTTDEHLVQNCGKMVILDKLLKSMKEKGSRVLIFS 524
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + L ++ RIDG T R + E+ + K +L+ +AGG+G+
Sbjct: 525 QMSRMLDIMEDYCLFRQYKYCRIDGSTAHEDRIVAIDEYNKPGSEKFIFLLTTRAGGLGI 584
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
LT+A V+ + W P +QA DRAHRIGQ V V+ + ++V++ + + KL
Sbjct: 585 NLTSADVVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITEESVEERMLERAAQKL 643
>gi|323310031|gb|EGA63226.1| Isw1p [Saccharomyces cerevisiae FostersO]
Length = 1069
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 234/501 (46%), Gaps = 39/501 (7%)
Query: 162 KYDQIPAHIESKLLPFQRDGVRFALQ-HGGRI--LLADEMGLGKTIQAIAVATCFRDV-- 216
++ + PA++ +L P+Q GV + + H +I +LADEMGLGKT+Q I+ R +
Sbjct: 124 QFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEK 183
Query: 217 --WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P S +W I +W P + L G ++ K+ +
Sbjct: 184 IPGPFLVIAPKSTLNNWLREINRW--TPDVNAFI----LQGDKEERAELIQ---KKLLGC 234
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
D I SY+++++ ++ L N++ +I DE+H +KN ++ + + + LL++
Sbjct: 235 DFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNR--LLIT 292
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVM 394
GTP + EL+ L L PD++ + ++ + + ++LH +++ +
Sbjct: 293 GTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIV--KQLHTVLQP-FL 349
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF-RELEVVKGKIKACKSEEEVQSLK 453
+RR+K DV L K+ +++ ++ + + ++L+ V G + +S+ + ++
Sbjct: 350 LRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIM 409
Query: 454 FTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAHHQP 497
+ N Y D AE P D L+ + E G + LIF+
Sbjct: 410 MQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSR 469
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTA 556
+LD + + RIDG T R + ++ D K +L+ +AGG+G+ LT+
Sbjct: 470 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTS 529
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A V+ + W P +QA DRAHRIGQ V V+ L+ +++V++ + + KL
Sbjct: 530 ADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQL 589
Query: 617 VLDGHENSLEVSSSQIRSSPA 637
V+ + SL+ ++ S A
Sbjct: 590 VIQQNRTSLKKKENKADSKDA 610
>gi|429767518|ref|ZP_19299715.1| protein, SNF2 family [Clostridium celatum DSM 1785]
gi|429180928|gb|EKY22129.1| protein, SNF2 family [Clostridium celatum DSM 1785]
Length = 1083
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/504 (25%), Positives = 236/504 (46%), Gaps = 58/504 (11%)
Query: 140 ENLHPLVQRAIAS--ASAAPDLREKYDQIPAHIESKLLPFQRDGVRF-----ALQHGGRI 192
+N++ + + IAS A+ +L IP + + L +Q G ++ + GG
Sbjct: 596 DNMNFINGKDIASHIANKIENLDSIDYDIPKDLNANLRDYQLTGFKWFKTLSYYEFGG-- 653
Query: 193 LLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQ 252
+LADEMGLGKTIQ IA + + I+TP+SL +W + +++ P +I ++
Sbjct: 654 ILADEMGLGKTIQTIAFLLSEKGKRSI-IVTPTSLIYNWKSEFEKFA--PDLDIKIIH-- 708
Query: 253 LGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSS-------NFKIVIADE 305
G FT P + YDV+L L + F I DE
Sbjct: 709 -GNKEERAFT----------PEEAK----KYDVLLTTYGTLRNDYDLYENITFDYCIIDE 753
Query: 306 SHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGN 365
+KN ++ + I K ++AL +GTP + +EL+ + + P + ++ +
Sbjct: 754 GQNIKNPLSQSSEVVKEIKAKVKFAL--TGTPIENNLLELWSLFDYIMPGYLYSRRKFQD 811
Query: 366 RYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQ 425
++ K N E+L L+K ++ RRLK +V+++LP K ++ +++ + + ++
Sbjct: 812 KFMKRD--------KNTEDLKRLIKPFIL-RRLKTEVMSELPDKIEKRFLIEMTD-EQKK 861
Query: 426 IYALF--------RELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLD 477
+Y + +E + K KI +++ L L+ KI ++
Sbjct: 862 VYKSYIDDIKVKMKEKDFTKDKITIFSYLTKLRQLTLDPSILVEGY--KGGSGKIDVTVE 919
Query: 478 YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDD 537
++ I+ K L+F+ +LD + ++ + + +DG T + R LV EF +
Sbjct: 920 LIQEFIKNDHKILLFSQFTSVLDNLKKILETEGIEYFYLDGQTKASQRVELVNEFNNSNK 979
Query: 538 VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAND 597
K ++S+KAGG GL LT+A VI + W P QA DRAHR GQ + V V L+A
Sbjct: 980 TKVFLISLKAGGTGLNLTSADVVIHFDPWWNPAIEDQATDRAHRFGQKNVVEVIKLIAKG 1039
Query: 598 TVDDIVWDVVRSKLENLGQVLDGH 621
++++ + + SK E + +V++G+
Sbjct: 1040 SIEEKIIKLQESKKEIINEVMNGN 1063
>gi|433653951|ref|YP_007297659.1| DNA/RNA helicase, superfamily II, SNF2 family [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433292140|gb|AGB17962.1| DNA/RNA helicase, superfamily II, SNF2 family [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 1065
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 229/486 (47%), Gaps = 60/486 (12%)
Query: 165 QIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVW-- 217
++P + L +Q G ++ + GG +LAD+MGLGKTIQ IA ++
Sbjct: 595 EVPKKLNGVLRKYQEVGFKWLKTLSSYGFGG--ILADDMGLGKTIQTIAFLLDEKEKHRE 652
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
P +++ P++L +W + IQ++ PS +V+S GS ++ S + ++
Sbjct: 653 PAIVICPTTLVYNWESEIQRF---APSLKTLVIS---GSKSERENLIKSIEESDVV---- 702
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
I SY ++ + + F I DE+ +KN +++ + I K +AL +GTP
Sbjct: 703 --ITSYPLIRRDIESYENIKFSYCILDEAQHIKNPKSQNAESVKRIKAKGYFAL--TGTP 758
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT--VMI 395
+ EL+ + L P + ++ +Y K V N E L++L K ++
Sbjct: 759 IENSLTELWSIFDFLMPGYLLSHRKFVEKYEKPIV-----RYKNEEALNDLSKHIRPFIL 813
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLKKDVL +LP K F ++ K+ +++Y + LE K +I EEE++S F
Sbjct: 814 RRLKKDVLKELPNKIETTSFAELT-KEQKELYMAY--LENAKTEI-----EEEIRSKGFE 865
Query: 456 EKNLINKIYT-------------------DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQ 496
+ KI T K+ +++ ++ + E+G + LIF+
Sbjct: 866 RSQI--KIITALTRLRQICCHPSMFVENYKGTSGKMELLMELIQELKESGHRALIFSQFT 923
Query: 497 PMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTA 556
L I ++K+ + +DG T R LV F K D ++S+KAGG GL L
Sbjct: 924 TALKLIEDNLKREKISYLYLDGETKTKERGELVKAFN-KGDSDVFLISLKAGGTGLNLVG 982
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A TVI + W P QA DRAHRIGQV++V V L+ T+++ + + K E +
Sbjct: 983 ADTVIHFDPWWNPAIEDQATDRAHRIGQVNTVQVIKLITQGTIEEKIVKLQEKKKEMINS 1042
Query: 617 VLDGHE 622
V++ E
Sbjct: 1043 VINSGE 1048
>gi|350546496|ref|ZP_08915882.1| helicase/SNF2 domain-containing protein [Mycoplasma iowae 695]
gi|349503946|gb|EGZ31503.1| helicase/SNF2 domain-containing protein [Mycoplasma iowae 695]
Length = 1044
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 234/473 (49%), Gaps = 55/473 (11%)
Query: 174 LLPFQRDGVRFALQH----GGRILLADEMGLGKTIQAIAVATCFRDVW-------PVLIL 222
L P+Q DG ++ +H G IL +DEMGLGKTIQ I++ F D++ LI+
Sbjct: 576 LKPYQLDGYKWLKKHYYLKTGSIL-SDEMGLGKTIQTISL---FDDIYNSTETKKTSLIV 631
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
TPSSL +W + ++ + + + + G+ I+ K N+ + +N++S
Sbjct: 632 TPSSLIYNWVSEFSKFAD------HIKIKAVDGNGEERKKIIEEMNKYNVLVTS-YNMLS 684
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
D+ L NF++++ DE H +KN + + + + + + L+GTP +
Sbjct: 685 TDLEL-----YKKKNFELIVIDEGHLIKNHFTIYSKSIKSLT--SNHKVALTGTPMENNI 737
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT--VMIRRLKK 400
+EL+ + + P + ++Y + ++ + L NL ++RR KK
Sbjct: 738 LELWSLFDFVMPGFLGEFSHFKSKY---------KNTADKKILDNLKDKIYPFILRRTKK 788
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALF--RELEVVKGKIKACKSEEEVQSL------ 452
DVL LP K + +F+D+ + + Y+L +E + + K+K K++ + ++
Sbjct: 789 DVLKDLPEKNEKTLFVDL-NNEQKLYYSLIFNQEKQSIINKVKENKTDFKKNNMAIFALL 847
Query: 453 -KFTEKNLINKIYTDSAE---AKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLK 508
K + K+ + A+ +K + ++ +++ K L+F+ ML + + K
Sbjct: 848 TKLRQICCSPKLIINGAKNHGSKFDLCISLIDQILKNKEKVLVFSQFSEMLKLMSEELNK 907
Query: 509 KKVHCIRIDGGTPPASRQALVTEFQEK--DDVKAAVLSMKAGGVGLTLTAASTVIFAELS 566
+ + I G RQ LV F ++ +DVK ++++K+GGVGL L+ A+ VI +
Sbjct: 908 RNIKHFVITGQVNKKERQELVDRFNDEKNEDVKVFLITLKSGGVGLNLSTANNVIHYDPW 967
Query: 567 WTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
W QA DRAHRIGQ ++VNV+ L++ D++++ + ++ +K + +LD
Sbjct: 968 WNLSAENQASDRAHRIGQKNNVNVFKLISKDSIEEKIINLQDTKKALIENILD 1020
>gi|374287205|ref|YP_005034290.1| putative helicase [Bacteriovorax marinus SJ]
gi|301165746|emb|CBW25318.1| putative helicase [Bacteriovorax marinus SJ]
Length = 1049
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 223/482 (46%), Gaps = 58/482 (12%)
Query: 162 KYDQIPAHIESKLLPFQRDG---VRFALQHGGRILLADEMGLGKTIQAIA-VATCFRDVW 217
+YD +P +++ L P+Q+ G ++F ++ LAD+MGLGKT+Q IA + + +
Sbjct: 593 EYD-LPQDLDATLRPYQKTGYNWLKFLHENKLGACLADDMGLGKTLQTIAFIQSIHEQID 651
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
VL++ P S+ L+W I ++ S++ + + G +R+ P D
Sbjct: 652 RVLVVCPVSILLNWEKEITKF-----SKLDIHIYHGG--------------ERSFPKDTK 692
Query: 278 FNIISYDVVLK-LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
+ SY V+ + + +F +++ DE LKN ++ A I KA Y + L+GT
Sbjct: 693 IILTSYGVMKREIDETFADKHFDVLVLDEVQHLKNIRSLGAYAARKI--KADYRICLTGT 750
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE--LHNLMKATVM 394
P + E + ++ P ++ G + SN + + A +
Sbjct: 751 PVENDLAEFYNIIDLSVPGIW-------------GDLEFIRTTSNQKSRLMARKTAAPFI 797
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQS--- 451
+RR K VL LP K V+L+ + + R+ Y L +K KI A S ++
Sbjct: 798 LRRTKDQVLTDLPPKLENNVYLNFDDGE-RKTY--LNNLVSIKQKINASPSRKKYGEILK 854
Query: 452 --LKFTEKNLINK-----IYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
L+ + L Y + A KI +++ LE +IE G + ++F+ LD I
Sbjct: 855 GLLQLRQSCLWQSPTAGLNYKNIASTKIEFLVEQLEQIIEEGHQTIVFSQFTTYLDLIQN 914
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
K RIDG RQ V +FQ K DV ++S+KAGGVGL LTAAS V
Sbjct: 915 TLSDKHWRLSRIDGSQSIKKRQQQVDDFQSGKSDV--FLISLKAGGVGLNLTAASYVFIM 972
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
+ W P QA DRAHRIGQ +++ VY + D+V++ V + K + +L +
Sbjct: 973 DPWWNPAVESQAIDRAHRIGQQNTLTVYRPIIKDSVEEKVLKLQEMKKQLFKDLLPDDDE 1032
Query: 624 SL 625
SL
Sbjct: 1033 SL 1034
>gi|410171404|ref|XP_003960267.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
13 [Homo sapiens]
Length = 673
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 243/506 (48%), Gaps = 57/506 (11%)
Query: 148 RAIASASAAPDLREKYDQIPAHIESKLLPFQRDGV-----RFALQHGGRILLADEMGLGK 202
RA A+ DLR+ + H+ S +Q +GV RF Q+G +L DEMGLGK
Sbjct: 25 RAEAARVQEQDLRQ-WGLTGIHLRS----YQLEGVNWLAQRFHCQNG--CILGDEMGLGK 77
Query: 203 TIQAIAV----ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNR 258
T Q IA+ A D P LIL P S+ +W +Q++ P V
Sbjct: 78 TCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMQRF--APGLSCVTY--------- 126
Query: 259 SGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQA-- 314
+G + ++++ + F+++ +Y++ LK + L S + +++ DE+H LKN +
Sbjct: 127 AGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLL 186
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVY--KNVHEYGNRYCKGGV 372
+T + ++ ++LLL+GTP + EL+ L + PD++ + V ++ RY
Sbjct: 187 HKTLSEFSVV----FSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQD--- 239
Query: 373 FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFR 431
I + + + ELH L++ ++RR+K +V +LP K ++ ++ + A L +
Sbjct: 240 --IEKESESASELHKLLQP-FLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYKAILMK 296
Query: 432 ELEVVKGKI-KACKSEEEVQSLK--FTEKNLINKI---------YTDSAEAKIPAVLDYL 479
+L+ + + K K + + L+ L + + + A K+ + L
Sbjct: 297 DLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLL 356
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
+ G + L+F+ MLD + + R+DG R + F ++ +
Sbjct: 357 AFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IF 415
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGGVG+ LTAA TVIF + + P + +QA RAHRIGQ SV V L+ DTV
Sbjct: 416 VFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTV 475
Query: 600 DDIVWDVVRSKLENLGQVLDGHENSL 625
++IV+ SKL+ +++G +L
Sbjct: 476 EEIVYRKAASKLQLTNMIIEGGHFTL 501
>gi|410989349|ref|XP_004000924.1| PREDICTED: probable global transcription activator SNF2L1 isoform 1
[Felis catus]
Length = 976
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 232/481 (48%), Gaps = 61/481 (12%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 121 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWV--- 177
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 178 PS--VRVICFVGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 230
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 231 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 288
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 289 DFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 343
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 344 MQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 401
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 402 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 461
Query: 524 SRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWTPG 570
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W P
Sbjct: 462 EREDKFLEVELLGQREAIEAFNVPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 521
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENS 624
+QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D N
Sbjct: 522 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 581
Query: 625 L 625
L
Sbjct: 582 L 582
>gi|391331672|ref|XP_003740267.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein Mi-2 homolog [Metaseiulus occidentalis]
Length = 1925
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 136/505 (26%), Positives = 232/505 (45%), Gaps = 70/505 (13%)
Query: 158 DLREKYDQIPAHI---ESKLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VA 210
D ++KYD P ++ ++L P+Q +G+ RF+ +LADEMGLGKTIQ I +
Sbjct: 673 DPKKKYDGQPPYVVENGNQLHPYQLEGINWLRFSWSQRTDTILADEMGLGKTIQTITFLY 732
Query: 211 TCFRD---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG-----SNRSGF- 261
+ +++ P L+ P S ++W + W P +V + N F
Sbjct: 733 SLYKEGLSRGPFLVAVPLSTLINWEREFELW--APEMYVVTYVGDKDSRAVIRENEFSFE 790
Query: 262 --TIVSSNT----KRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK 315
+ SSN K++ P+ + SY+++ Q +L S ++ +++ DE+H LK+ Q+K
Sbjct: 791 DKAVRSSNKVFKMKKDAPIKFHCLLTSYELISMDQALLGSIDWHVLVVDEAHRLKSNQSK 850
Query: 316 --RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVF 373
+ + PI +Y LLL+GTP + ELF + L P + ++ + N F
Sbjct: 851 FFKVLSQYPI----RYKLLLTGTPLQNNLEELFHLMNFLSPANFNDLQGFLNE------F 900
Query: 374 GIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA---EKDMRQIYALF 430
++LH+L+ ++RRLK DVL +P K V ++++ +K + I
Sbjct: 901 ADIAKEEQVKKLHDLL-GCHLLRRLKADVLTGMPSKSEFIVRVELSPIQKKYYKWILTRN 959
Query: 431 RELEVVKG------------KIKACKSE-----------EEVQSLKFTEKNLINKIYTDS 467
+ +KG +K C + E + + FT +L+
Sbjct: 960 YDALSIKGGGQSVSLLNIMMDLKKCCNHPFLFPAAQAEAERLANGAFTVNSLVKSC---- 1015
Query: 468 AEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQA 527
K+ + + + E G + LIF+ MLD + + RIDGG RQ
Sbjct: 1016 --GKMIVMQKMMRLLKEQGHRVLIFSQMTKMLDLLEDFLEGEGYKYERIDGGITGTMRQE 1073
Query: 528 LVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVS 586
+ F + D + +LS +AGG+G+ L A TVI + W P + IQA RAHR+GQ +
Sbjct: 1074 AIDRFNKPDAEQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQTN 1133
Query: 587 SVNVYYLLANDTVDDIVWDVVRSKL 611
V +Y + +V++ V V + K+
Sbjct: 1134 KVMIYRFVTRASVEERVTQVAKKKM 1158
>gi|384462043|ref|YP_005674638.1| helicase, SNF2/RAD54 family [Clostridium botulinum F str. 230613]
gi|295319060|gb|ADF99437.1| helicase, SNF2/RAD54 family [Clostridium botulinum F str. 230613]
Length = 1050
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 221/473 (46%), Gaps = 46/473 (9%)
Query: 163 YDQIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIA-----VATC 212
YD +P ++S + P+QR G ++ + GG +LADEMGLGKT+Q IA V
Sbjct: 600 YD-VPKSLQSIMRPYQRFGFKWFKTLASCGFGG--ILADEMGLGKTLQTIAFIKSEVEEN 656
Query: 213 FRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNI 272
P L++ P+SL +W I+++ P + ++ SG + + I
Sbjct: 657 KNKPMPSLVVCPTSLVYNWEDEIKKFQ--PDLKCTLI---------SGDKESREESIKAI 705
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
+ + I SY ++ + + F+ DE+ +KN Q+ + I KA
Sbjct: 706 DISDIV-ITSYALIRRDIDKYEKVKFRYCFLDEAQNIKNPQSLNAQSVKSI--KANNYFA 762
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
L+GTP + EL+ + + P N + +Y V + A +EL+N +K
Sbjct: 763 LTGTPVENSLTELWSIFDFIMPGYLLNYRRFYAKYESPIVKDKNEEA--LKELNNHIKPF 820
Query: 393 VMIRRLKKDVLAQLPVK-----------RRQQVFLDVAEKDMRQIYALFRELEVVKGKIK 441
++ RRLKK V+ +LP K +++V+ AE ++ Y RE K KIK
Sbjct: 821 IL-RRLKKHVIKELPPKIEHNIVVNMTEEQKKVYASFAESAKKEFYKEIRERGFNKSKIK 879
Query: 442 ACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDA 501
++ + I + + K +LD + + I AG K L+F+ +L
Sbjct: 880 ILSIITRLRQICCDPSTFIEN--YEGSNGKTETLLDIVNSSINAGHKILLFSQFTSVLKN 937
Query: 502 IHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAAVLSMKAGGVGLTLTAASTV 560
I ++F ++ + +DG T R +LV +F K D+ ++S+KAGG GL LT+A V
Sbjct: 938 IAEVFKANNINYLYLDGSTKADVRGSLVKDFNNGKGDI--FLISLKAGGTGLNLTSADIV 995
Query: 561 IFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLEN 613
I + W P QA DRAHRIGQ +V V L+A T+++ ++ + K N
Sbjct: 996 IHFDPWWNPAVEDQASDRAHRIGQKKTVEVIRLIAKGTIEEKIYKITTKKERN 1048
>gi|404495855|ref|YP_006719961.1| helicase [Geobacter metallireducens GS-15]
gi|78193469|gb|ABB31236.1| helicase, putative [Geobacter metallireducens GS-15]
Length = 1142
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 224/487 (45%), Gaps = 64/487 (13%)
Query: 166 IPAHIESKLLPFQRDG---VRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW----- 217
+P +++ L +Q D + F H LAD+MGLGKTIQAI++ +
Sbjct: 675 LPERLQATLRHYQVDAFHWLAFLYTHRFGACLADDMGLGKTIQAISLLAALHEGTLPSRV 734
Query: 218 ----PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P LI+ P SL +W + ++ P+ VL+ G + FT V
Sbjct: 735 PEPRPHLIVVPPSLLFNWENELARFY---PA--FTVLTYRGTGRSADFTGVD-------- 781
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
+ SY ++ + IL F ++ DE+ +KN QA T A + + + L L
Sbjct: 782 ----IVLTSYGIIPRDIGILAEIPFHCIVFDEAQAVKNIQADTTGACRRL--RGAFTLCL 835
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT- 392
+GTP + E F ++ P + + E+ + G + L L++ T
Sbjct: 836 TGTPVENHLGEYFSVMDLAVPGLLGSYEEFRRQ----------AGNAAAPFLETLVRRTR 885
Query: 393 -VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE------LEVVKGK------ 439
++RR K+ + A+LP K ++L++ + + +Y E LE +GK
Sbjct: 886 PFVLRRSKQMIAAELPPKIETDIYLELTPRQ-KALYTRTVEEVRETVLEAWRGKSPGQAR 944
Query: 440 IKACKSEEEVQSLKFTEKNLINKIYTDSAEA--KIPAVLDYLETVIEAGCKFLIFAHHQP 497
I A + ++ L + + LI DS E K+ +++ LE + G L+F+
Sbjct: 945 IIALTAILRLRQLCLSPRLLI----ADSREPSPKVEFLVEQLEELFTEGHSVLVFSQFTS 1000
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
LD + ++ VH R+DG TP R+ LVT FQ+ D+ +LS+KAGG GL LT A
Sbjct: 1001 FLDIVEGELSRRGVHYYRLDGSTPVPERKRLVTAFQKGDEPSVFLLSLKAGGKGLNLTRA 1060
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
+ V + W P QA DRAHRIGQ V + L+ T+++ + ++ + KL+ +
Sbjct: 1061 TYVFHLDPWWNPAVENQASDRAHRIGQTRQVTITRLVMRHTIEEKMMELKKRKLKLYHAL 1120
Query: 618 LDGHENS 624
L+ ENS
Sbjct: 1121 LE--ENS 1125
>gi|257438160|ref|ZP_05613915.1| N-domain protein, SNF2 family [Faecalibacterium prausnitzii A2-165]
gi|257199491|gb|EEU97775.1| SNF2 family N-terminal domain protein [Faecalibacterium prausnitzii
A2-165]
Length = 1119
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 230/472 (48%), Gaps = 44/472 (9%)
Query: 167 PAHIESKLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRD----VWPV 219
PA ++ L +QRDG R+ +G +LAD+MGLGKT+Q ++ R+ P
Sbjct: 652 PASLQKVLRKYQRDGYRWLRTLDGYGMGGILADDMGLGKTVQVLSYLLALREQGGNPLPS 711
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
LI+ P+SL L+WA Q++ P VVV + + DG
Sbjct: 712 LIVCPASLVLNWAEECQKF--TPELNCVVVDGD-----------AAHRAQLAEQWDGADV 758
Query: 280 II-SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPA 338
++ SYD++ + + + S F I DE+ +KN ++ A + + ++AL +GTP
Sbjct: 759 VVTSYDLLRRDETLYESQKFYACILDEAQAIKNHTTQKYKAVCGVNSRVRFAL--TGTPV 816
Query: 339 LSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT--VMIR 396
+R EL+ L P + +R+ K I Q ++ + L + T ++R
Sbjct: 817 ENRLGELWSIFSFLMPGYLPPYKSFCSRFEKP----ITQ-ENDPAAVRRLNQLTGPFILR 871
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKF-- 454
R+K +VL +LP K + V+ E++ R++Y + + K++A K E+++
Sbjct: 872 RMKSEVLKELPPKT-ENVYRIELEEEQRKLY--LAAVVDAREKLRAAKPEDKMAVFAVLM 928
Query: 455 ------TEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLK 508
+ LI +T + AK+ A ++ + + +E+G + L+F+ ML+ + +
Sbjct: 929 RLREICCDPRLIADNWTGGS-AKLDACIELVTSAVESGHRILLFSQFTSMLELLAKRLDA 987
Query: 509 KKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWT 568
+ V + G TP R LV F + ++S++AGG GL LTAA VI + W
Sbjct: 988 EGVSHFTLQGSTPKPVRAELVRRFN-GGEASVFLISLRAGGTGLNLTAADIVIHYDPWWN 1046
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
QA DRA+RIGQ + V VY L+ DT+++ + ++ ++K ++L + + G
Sbjct: 1047 VAAQNQATDRAYRIGQQNPVQVYKLITQDTIEEKIVELQQAK-QDLAETVTG 1097
>gi|168205333|ref|ZP_02631338.1| putative helicase with SNF2 domain [Clostridium perfringens E str.
JGS1987]
gi|170663173|gb|EDT15856.1| putative helicase with SNF2 domain [Clostridium perfringens E str.
JGS1987]
Length = 1015
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 225/472 (47%), Gaps = 59/472 (12%)
Query: 161 EKYDQIPAH-IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPV 219
EK+ I + ++ K P Q D + L + R +LADEMGLGKT +AI A +
Sbjct: 571 EKFKAIDFNSLKRKPFPHQSDIMEDML-NLKRFILADEMGLGKTYEAILFAASI--PYKK 627
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL--DGL 277
L++ P++L +W I Q L P S + V+ S ++N K+ PL +G
Sbjct: 628 LVICPATLLFNWRKEILQAL--PNSYVRVIDS-------------NTNIKKYEPLPEEGW 672
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKN------AQAKRTAATLPIIKKAQYAL 331
II+Y+++ K + L+ F +++ DE+H++K + KR TL I + +
Sbjct: 673 L-IINYELLEKFHDKLLDEKFNVLLCDEAHYIKGVDNKGFSNTKRAKNTLKIAENIPFKC 731
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L+GTP ++P + + L + E F Y SN E LH+L++
Sbjct: 732 ALTGTPITNKPKDCWNLLRFI---------ESKEINIGFETFKKYFKDSNAESLHSLLRN 782
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQS 451
MIRRLKKD+L LP R V V +K+ + K+K + + +
Sbjct: 783 K-MIRRLKKDIL-DLPEITRMFVPNRVNDKEYNK-------------KLKEYWNHKGDKY 827
Query: 452 LKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKV 511
++F +N + A+ K+ + + E ++ K +IF ++ + F K
Sbjct: 828 IEFMA--YLNSLRYILAKEKVKSTISLAENLLLENEKVVIFTNYTEPAEKFKNHF---KN 882
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
+ I+G P RQ ++ +FQ + K + ++KA VG+TLT A+ VIF + + P
Sbjct: 883 KAVLINGDVPIKERQKIIEDFQNGES-KVFIGNLKAASVGITLTKANIVIFNDFDYVPAT 941
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLA-NDTVDDIVWDVVRSKLENLGQVLDGHE 622
IQAE+R HRIGQ N++Y A N +D+ + +++ K + +++D +
Sbjct: 942 HIQAEERIHRIGQDKECNIFYNYAENIEIDEWIAEMLEKKFNMISKIVDNRD 993
>gi|410171388|ref|XP_003960259.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
5 [Homo sapiens]
Length = 878
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 243/506 (48%), Gaps = 57/506 (11%)
Query: 148 RAIASASAAPDLREKYDQIPAHIESKLLPFQRDGV-----RFALQHGGRILLADEMGLGK 202
RA A+ DLR+ + H+ S +Q +GV RF Q+G +L DEMGLGK
Sbjct: 25 RAEAARVQEQDLRQ-WGLTGIHLRS----YQLEGVNWLAQRFHCQNG--CILGDEMGLGK 77
Query: 203 TIQAIAV----ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNR 258
T Q IA+ A D P LIL P S+ +W +Q++ P V
Sbjct: 78 TCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMQRF--APGLSCVTY--------- 126
Query: 259 SGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQA-- 314
+G + ++++ + F+++ +Y++ LK + L S + +++ DE+H LKN +
Sbjct: 127 AGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLL 186
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVY--KNVHEYGNRYCKGGV 372
+T + ++ ++LLL+GTP + EL+ L + PD++ + V ++ RY
Sbjct: 187 HKTLSEFSVV----FSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQD--- 239
Query: 373 FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFR 431
I + + + ELH L++ ++RR+K +V +LP K ++ ++ + A L +
Sbjct: 240 --IEKESESASELHKLLQP-FLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYKAILMK 296
Query: 432 ELEVVKGKI-KACKSEEEVQSLK--FTEKNLINKI---------YTDSAEAKIPAVLDYL 479
+L+ + + K K + + L+ L + + + A K+ + L
Sbjct: 297 DLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLL 356
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
+ G + L+F+ MLD + + R+DG R + F ++ +
Sbjct: 357 AFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IF 415
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGGVG+ LTAA TVIF + + P + +QA RAHRIGQ SV V L+ DTV
Sbjct: 416 VFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTV 475
Query: 600 DDIVWDVVRSKLENLGQVLDGHENSL 625
++IV+ SKL+ +++G +L
Sbjct: 476 EEIVYRKAASKLQLTNMIIEGGHFTL 501
>gi|290878263|emb|CBK39322.1| Isw1p [Saccharomyces cerevisiae EC1118]
Length = 1069
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 234/501 (46%), Gaps = 39/501 (7%)
Query: 162 KYDQIPAHIESKLLPFQRDGVRFALQ-HGGRI--LLADEMGLGKTIQAIAVATCFRDV-- 216
++ + PA++ +L P+Q GV + + H +I +LADEMGLGKT+Q I+ R +
Sbjct: 124 QFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEK 183
Query: 217 --WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P S +W I +W P + L G ++ K+ +
Sbjct: 184 IPGPFLVIAPKSTLNNWLREINRW--TPDVNAFI----LQGDKEERAELIQ---KKLLGC 234
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
D I SY+++++ ++ L N++ +I DE+H +KN ++ + + + LL++
Sbjct: 235 DFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNR--LLIT 292
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVM 394
GTP + EL+ L L PD++ + ++ + + ++LH +++ +
Sbjct: 293 GTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIV--KQLHTVLQP-FL 349
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF-RELEVVKGKIKACKSEEEVQSLK 453
+RR+K DV L K+ +++ ++ + + ++L+ V G + +S+ + ++
Sbjct: 350 LRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIM 409
Query: 454 FTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAHHQP 497
+ N Y D AE P D L+ + E G + LIF+
Sbjct: 410 MQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSR 469
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTA 556
+LD + + RIDG T R + ++ D K +L+ +AGG+G+ LT+
Sbjct: 470 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTS 529
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A V+ + W P +QA DRAHRIGQ V V+ L+ +++V++ + + KL
Sbjct: 530 ADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQL 589
Query: 617 VLDGHENSLEVSSSQIRSSPA 637
V+ + SL+ ++ S A
Sbjct: 590 VIQQNRTSLKKKENKADSKDA 610
>gi|119571321|gb|EAW50936.1| chromodomain helicase DNA binding protein 1-like, isoform CRA_a
[Homo sapiens]
Length = 897
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 243/506 (48%), Gaps = 57/506 (11%)
Query: 148 RAIASASAAPDLREKYDQIPAHIESKLLPFQRDGV-----RFALQHGGRILLADEMGLGK 202
RA A+ DLR+ + H+ S +Q +GV RF Q+G +L DEMGLGK
Sbjct: 25 RAEAARVQEQDLRQ-WGLTGIHLRS----YQLEGVNWLAQRFHCQNG--CILGDEMGLGK 77
Query: 203 TIQAIAV----ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNR 258
T Q IA+ A D P LIL P S+ +W +Q++ P V
Sbjct: 78 TCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMQRF--APGLSCVTY--------- 126
Query: 259 SGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQA-- 314
+G + ++++ + F+++ +Y++ LK + L S + +++ DE+H LKN +
Sbjct: 127 AGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLL 186
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVY--KNVHEYGNRYCKGGV 372
+T + ++ ++LLL+GTP + EL+ L + PD++ + V ++ RY
Sbjct: 187 HKTLSEFSVV----FSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQD--- 239
Query: 373 FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFR 431
I + + + ELH L++ ++RR+K +V +LP K ++ ++ + A L +
Sbjct: 240 --IEKESESGNELHKLLQP-FLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYKAILMK 296
Query: 432 ELEVVKGKI-KACKSEEEVQSLK--FTEKNLINKI---------YTDSAEAKIPAVLDYL 479
+L+ + + K K + + L+ L + + + A K+ + L
Sbjct: 297 DLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLL 356
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
+ G + L+F+ MLD + + R+DG R + F ++ +
Sbjct: 357 AFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IF 415
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGGVG+ LTAA TVIF + + P + +QA RAHRIGQ SV V L+ DTV
Sbjct: 416 VFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTV 475
Query: 600 DDIVWDVVRSKLENLGQVLDGHENSL 625
++IV+ SKL+ +++G +L
Sbjct: 476 EEIVYRKAASKLQLTNMIIEGGHFTL 501
>gi|429753325|ref|ZP_19286134.1| protein, SNF2 family [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429173991|gb|EKY15496.1| protein, SNF2 family [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 951
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 150/527 (28%), Positives = 236/527 (44%), Gaps = 86/527 (16%)
Query: 145 LVQRAIASASAAPDLR-----EKYDQIPA-HIESKLLPFQRDGVRFALQH---GGRILLA 195
L + A A P+L+ EK + P+ ++ + L P+Q +GV + LQH G LA
Sbjct: 442 LAKNNYALLEAIPELKPQTIIEKVNYTPSPNLRATLRPYQVEGVEWLLQHYHNGVGACLA 501
Query: 196 DEMGLGKTIQAIAVATCFRDVWP---------------------VLILTPSSLRLHWAAM 234
D+MGLGKT+Q IA+ D P VL++ PSSL +W
Sbjct: 502 DDMGLGKTLQTIALLVAIHDTLPLKENNFTDLFSATEPQKETLKVLVILPSSLLFNWYDE 561
Query: 235 IQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILM 294
+++ P +Q GS+ T + +R D +F SY +V + L
Sbjct: 562 TKRF---APH---FKCTQYIGSSSERKTKI----RRLTNYDVVFT--SYPIVERDGKELE 609
Query: 295 SSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYP 354
F+ +I DES +KN +K A + KA++ + LSGTP + +L+ Q++ + P
Sbjct: 610 KLEFRYIILDESQRIKNKNSKTFKAINAL--KAEHRIALSGTPIENALSDLWAQMQFINP 667
Query: 355 DVYKNVHEYGNRYCKGGVFGIYQGASNH--------------EELHNLMKATVMIRRLKK 400
G G Y H EEL L+ ++ RR K+
Sbjct: 668 ----------------GQLGTYNFFHKHYEVEISKKKNPQALEELKTLVGKHIL-RRTKE 710
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGK-IKACKSEEEVQSLKFTEK-- 457
VL+ LP Q + ++E Q Y RE V+ + ++A + E +L+ K
Sbjct: 711 QVLSDLPDIEEQLAYCPMSEAQA-QWYE--REKSKVRNQLLEASEPISEFNALQMLTKLR 767
Query: 458 NLINKIYTDSAEAKIPA-----VLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
+ N A++ IP+ V+ Y+ET+ A K LIF+ L+ K+
Sbjct: 768 QISNHPVLADAQSTIPSGKYQEVISYMETLHSAQHKALIFSSFVKHLELFEAWCKTHKIK 827
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
++ G T R++ V FQ ++DV +S+KAG VGL LT AS V+ + W P
Sbjct: 828 YSKLTGATATHERKSQVEAFQNQEDVSFFFISLKAGEVGLNLTKASYVLLLDPWWNPFSE 887
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
QA RAHRIGQ + VNV ++ DT+++ + + +K E V+D
Sbjct: 888 RQAIARAHRIGQENKVNVIRFVSKDTIEEKIIKLQENKTELFENVID 934
>gi|393779299|ref|ZP_10367544.1| SNF2 family N-terminal domain protein [Capnocytophaga sp. oral
taxon 412 str. F0487]
gi|392610573|gb|EIW93350.1| SNF2 family N-terminal domain protein [Capnocytophaga sp. oral
taxon 412 str. F0487]
Length = 950
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 138/500 (27%), Positives = 230/500 (46%), Gaps = 65/500 (13%)
Query: 158 DLREKYDQIPA-HIESKLLPFQRDGVRFALQH---GGRILLADEMGLGKTIQAIAVATCF 213
+L EK P+ ++ + L P+Q +GV + LQH G LAD+MGLGKT+Q IA+
Sbjct: 461 NLVEKVSYTPSPNLRATLRPYQIEGVEWLLQHYYNGVGACLADDMGLGKTLQTIALLVAI 520
Query: 214 RDVWP---------------------VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQ 252
D P VL++ PSSL +W +++ P +Q
Sbjct: 521 HDALPEKAIETADLFSEIEKSKEALKVLVILPSSLIFNWYDETKRF---APH---FKCTQ 574
Query: 253 LGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA 312
G++R KR D +F SY +V + + F+ +I DES +KN
Sbjct: 575 YVGADRK------VKAKRLGNYDVVFT--SYPIVERDVELFQKYEFRYIILDESQRIKNK 626
Query: 313 QAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV 372
+K A + KA + + LSGTP + +L+ Q++ + P++ K+ Y + Y V
Sbjct: 627 NSKTFKAIHTL--KATHRIALSGTPIENSLSDLWSQMQFINPNILKS---YASFYKNYEV 681
Query: 373 -FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFR 431
+ EEL ++ + ++RR K+ VL LP Q ++ ++E + +
Sbjct: 682 EISKKKNTQALEELKTII-SPFLLRRTKEQVLDDLPEMEEQIIYCPMSEAQHK-----WY 735
Query: 432 ELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDS------------AEAKIPAVLDYL 479
E E K + + + E + +F N++ ++ S A K V++Y+
Sbjct: 736 ETEKSKVRNQLLQINEPIS--EFNTLNMLMRLRKISLHPKLVDKESKIASGKYEEVINYM 793
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
E ++++ K LIF+ L + KK + ++ G TP R+ V FQ +
Sbjct: 794 EELLQSSRKALIFSSFVSHLALYEEWCNKKGIKYAKLTGETPSFERKNQVEMFQNNPTIS 853
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+S+KAG VGL LT AS V+ + W P QA RAHRIGQ + VNV ++ DT+
Sbjct: 854 FFFISLKAGEVGLNLTQASYVLLLDPWWNPFSEKQAIGRAHRIGQQNKVNVIRFVSKDTI 913
Query: 600 DDIVWDVVRSKLENLGQVLD 619
++ + + +SK E ++D
Sbjct: 914 EEKIIKLQKSKTELSENIID 933
>gi|374340659|ref|YP_005097395.1| DNA/RNA helicase [Marinitoga piezophila KA3]
gi|372102193|gb|AEX86097.1| DNA/RNA helicase, superfamily II, SNF2 family [Marinitoga
piezophila KA3]
Length = 988
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 245/522 (46%), Gaps = 47/522 (9%)
Query: 99 AFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPD 158
F KIP+ E L + + S ++ N+EI+ L ++ I +
Sbjct: 476 TFIKIPEYILEKLEDLKVKKEKITVESYNIYSLLNSENIEIDTLDEKTKKYIEKVKSFEK 535
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIA-VATCFR 214
++E +IP ++ + +Q +G RF ++ +LAD+MGLGKT+Q IA + + R
Sbjct: 536 IKEY--EIP-ELKIPMRKYQIEGYRFLRYLQEYNFNGILADDMGLGKTLQTIALILSLKR 592
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
LI+ P S+ +WA I ++ SN + + N++++IP
Sbjct: 593 KDRKFLIIAPRSVIYNWANEIDKF----------------TSNIKYY--IYHNSQKDIPE 634
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
D I +Y+ + L + + +I DE+ F+KN + K A + K+ + L L+
Sbjct: 635 DTDVIITTYNTLRNSIEELKKTKYFYIILDEAQFIKNDETKLYKAIRKL--KSNHKLALT 692
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT-- 392
GTP + +L+ E L P + N ++ +Y +N E + L K
Sbjct: 693 GTPLENSLTDLYNIFEFLMPGFFGNKKDFLRKY----------NYANKESIERLKKKIHP 742
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAE---KDMRQIYALFRE-LEVVKGKIKACKSEEE 448
++RR K++VL +LP K + +F ++ + K QI +R+ + + +G I E
Sbjct: 743 FILRRTKENVLKELPPKTEEYIFNEMTQHQKKIYHQIAEEYRQKIAMSQGTINFSVLEGL 802
Query: 449 VQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLK 508
++ + + + +S+ K ++++ V+E K +IF+ M++ + + K
Sbjct: 803 LRLRQIVNHPKLLGVNIESS--KFNMFKNFIKEVLEENHKIVIFSQFVKMIEIMEEWLEK 860
Query: 509 KKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWT 568
+K+ ++I G T R +V EF +++K ++S+KAGG GL +T A VI + W
Sbjct: 861 EKIQYLKIIGKT--KKRVEIVEEFNNTNNIKILLVSLKAGGTGLNITGADYVIHYDPWWN 918
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
P QA DR +RIGQ V VY + +++++ + + +K
Sbjct: 919 PAVENQATDRVYRIGQNKPVFVYKFITRESIEEKIMKLKEAK 960
>gi|373428660|ref|NP_004275.4| chromodomain-helicase-DNA-binding protein 1-like isoform 1 [Homo
sapiens]
gi|410171380|ref|XP_003960255.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
1 [Homo sapiens]
gi|28629217|gb|AAO49505.1| ALC1 [Homo sapiens]
Length = 897
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 243/506 (48%), Gaps = 57/506 (11%)
Query: 148 RAIASASAAPDLREKYDQIPAHIESKLLPFQRDGV-----RFALQHGGRILLADEMGLGK 202
RA A+ DLR+ + H+ S +Q +GV RF Q+G +L DEMGLGK
Sbjct: 25 RAEAARVQEQDLRQ-WGLTGIHLRS----YQLEGVNWLAQRFHCQNG--CILGDEMGLGK 77
Query: 203 TIQAIAV----ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNR 258
T Q IA+ A D P LIL P S+ +W +Q++ P V
Sbjct: 78 TCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMQRF--APGLSCVTY--------- 126
Query: 259 SGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQA-- 314
+G + ++++ + F+++ +Y++ LK + L S + +++ DE+H LKN +
Sbjct: 127 AGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLL 186
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVY--KNVHEYGNRYCKGGV 372
+T + ++ ++LLL+GTP + EL+ L + PD++ + V ++ RY
Sbjct: 187 HKTLSEFSVV----FSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQD--- 239
Query: 373 FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFR 431
I + + + ELH L++ ++RR+K +V +LP K ++ ++ + A L +
Sbjct: 240 --IEKESESASELHKLLQP-FLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYKAILMK 296
Query: 432 ELEVVKGKI-KACKSEEEVQSLK--FTEKNLINKI---------YTDSAEAKIPAVLDYL 479
+L+ + + K K + + L+ L + + + A K+ + L
Sbjct: 297 DLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLL 356
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
+ G + L+F+ MLD + + R+DG R + F ++ +
Sbjct: 357 AFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IF 415
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGGVG+ LTAA TVIF + + P + +QA RAHRIGQ SV V L+ DTV
Sbjct: 416 VFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTV 475
Query: 600 DDIVWDVVRSKLENLGQVLDGHENSL 625
++IV+ SKL+ +++G +L
Sbjct: 476 EEIVYRKAASKLQLTNMIIEGGHFTL 501
>gi|84043448|ref|XP_951514.1| transcription activator [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348313|gb|AAQ15639.1| transcription activator, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62359085|gb|AAX79532.1| transcription activator, putative [Trypanosoma brucei]
gi|261326368|emb|CBH09327.1| transcription activator, putative [Trypanosoma brucei gambiense
DAL972]
Length = 1160
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 139/490 (28%), Positives = 220/490 (44%), Gaps = 76/490 (15%)
Query: 167 PAHIESKLLPFQRDGVRFALQHGGRIL---LADEMGLGKTIQAIAVATCFRDV----WPV 219
P++I KL P+Q +GV + L R + LADEMGLGKT+Q I+ + P
Sbjct: 167 PSYIRGKLRPYQIEGVNWLLGLYSRCINGILADEMGLGKTLQTISTLAYLKFSHGLPGPH 226
Query: 220 LILTPSSLRLHWAAMIQQWL------------NIPPSEIVVVLSQLGGSNRSGFTIVSSN 267
L++ P S+ +W ++QW NI P + L G
Sbjct: 227 LVVCPKSVMGNWYREVRQWCPALSVLKFHCSSNIRPQLVRAHLMPCG------------- 273
Query: 268 TKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKA 327
NI D + + ++++VL+ ++ +I DE+H LKN + R TL I A
Sbjct: 274 ---NIKYDII--VTTFEMVLEEHGAFRKIPWQYLIVDEAHKLKNEEG-RAHVTLGSIN-A 326
Query: 328 QYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHN 387
Y L+++GTP + EL+ L L P ++ + + + F G + E L N
Sbjct: 327 NYRLIITGTPLQNNLKELWALLHFLTPRLFDDSKSFDS------WFDTASGQEDSEALSN 380
Query: 388 LMK--ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR-QIYALFRELEVV-KGKIKAC 443
+ + A +MIRRLK +V +P K+ V +++ R + L ++ EV+ KG +
Sbjct: 381 MHQILAPLMIRRLKSEVSTGIPPKKEIYVSCRLSKVQRRWYMQVLAKDAEVLNKG---SG 437
Query: 444 KSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDYLETVIE------------------ 484
S + + + + +IN Y D E P + D E +++
Sbjct: 438 GSSAFLTNTLMSLRKVINHPYMMDGGEEGPPFITD--ERIVKYSGKMLLLDKLLHRLRRD 495
Query: 485 --AGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAA 541
G K LIF+ MLD + + RIDG T R + + F K D
Sbjct: 496 EKEGHKVLIFSQFTSMLDILEDYCSMRGFKVCRIDGSTSGYDRDSQMAAFNAPKSDYFIF 555
Query: 542 VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 601
+LS +AGG+G+ L AA+ VI + W P +QA+DRAHRIGQ V VY + + TV++
Sbjct: 556 LLSTRAGGLGINLQAANNVIIYDSDWNPQMDLQAQDRAHRIGQKRVVRVYRFVTDGTVEE 615
Query: 602 IVWDVVRSKL 611
++ KL
Sbjct: 616 RIYHRALKKL 625
>gi|266625310|ref|ZP_06118245.1| helicase, SNF2/RAD54 family, partial [Clostridium hathewayi DSM
13479]
gi|288862792|gb|EFC95090.1| helicase, SNF2/RAD54 family [Clostridium hathewayi DSM 13479]
Length = 889
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 143/505 (28%), Positives = 234/505 (46%), Gaps = 45/505 (8%)
Query: 128 VLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRF--- 184
+L E SG + + L V R + S + +IP + S L +Q+ G R+
Sbjct: 391 ILKEGSGITLYRDALFKAVVRGMKSVEDSDY------EIPLTLRSVLREYQKTGFRWLKT 444
Query: 185 --ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWP---VLILTPSSLRLHWAAMIQQWL 239
+ GG +LAD+MGLGKTIQ IA+ + P LI+ P+SL +W I +
Sbjct: 445 LDSYGFGG--ILADDMGLGKTIQVIALLLDESNREPDSSALIVCPASLVYNWENEIHHF- 501
Query: 240 NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFK 299
P+ V +S S+ G I SYD++ + F+
Sbjct: 502 --APTLKVRTISGTAQEREELLKAASA---------GEILITSYDLLKRDIAFYEEREFR 550
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
I DE+ ++KNA + A + + ++AL +GTP +R EL+ + L P +
Sbjct: 551 FQIVDEAQYIKNASTQSAKAVKSVNARTRFAL--TGTPIENRLSELWSIFDFLMPGFLFS 608
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
+ Y V Q + + LH ++ ++RRLKKDVL +LP K + V
Sbjct: 609 YQRFKKEYELPIVRD--QDENCLKGLHRMI-GPFILRRLKKDVLKELPDKL-ENVIYSGF 664
Query: 420 EKDMRQIYA-----LFRELEVV-KGKIKACKSEEEVQSLK--FTEKNLINKIYTDSAEAK 471
EK+ +++Y + ++LE+ G + ++ L+ + +L Y S+ AK
Sbjct: 665 EKEQKELYTANAWQVKQQLELAGDGGSDRIQILAQLTRLRQICCDPHLCYSNYNGSS-AK 723
Query: 472 IPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTE 531
+ +D + +E G K L+F+ ML+ I + K+ + + G TP R +V+
Sbjct: 724 LETCIDLIRNGVEGGHKILLFSQFTSMLEIIEKRLKKEGMAYYILTGATPKEERLHMVSS 783
Query: 532 FQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
F++ D V ++S+KAGG GL LTAA VI + W QA DR HRIGQ V V+
Sbjct: 784 FKD-DGVPVFLISLKAGGTGLNLTAADVVIHYDPWWNVAAQNQATDRTHRIGQEKQVTVF 842
Query: 592 YLLANDTVDDIVWDVVRSKLENLGQ 616
L+ T+++ + + SK +NL +
Sbjct: 843 KLITKGTIEENILKLQESK-KNLAE 866
>gi|311033359|sp|Q86WJ1.2|CHD1L_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 1-like;
AltName: Full=Amplified in liver cancer protein 1
gi|55663194|emb|CAH72650.1| chromodomain helicase DNA binding protein 1-like [Homo sapiens]
Length = 897
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 243/506 (48%), Gaps = 57/506 (11%)
Query: 148 RAIASASAAPDLREKYDQIPAHIESKLLPFQRDGV-----RFALQHGGRILLADEMGLGK 202
RA A+ DLR+ + H+ S +Q +GV RF Q+G +L DEMGLGK
Sbjct: 25 RAEAARVQEQDLRQ-WGLTGIHLRS----YQLEGVNWLAQRFHCQNG--CILGDEMGLGK 77
Query: 203 TIQAIAV----ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNR 258
T Q IA+ A D P LIL P S+ +W +Q++ P V
Sbjct: 78 TCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMQRF--APGLSCVTY--------- 126
Query: 259 SGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQA-- 314
+G + ++++ + F+++ +Y++ LK + L S + +++ DE+H LKN +
Sbjct: 127 AGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLL 186
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVY--KNVHEYGNRYCKGGV 372
+T + ++ ++LLL+GTP + EL+ L + PD++ + V ++ RY
Sbjct: 187 HKTLSEFSVV----FSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQD--- 239
Query: 373 FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFR 431
I + + + ELH L++ ++RR+K +V +LP K ++ ++ + A L +
Sbjct: 240 --IEKESESASELHKLLQP-FLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYKAILMK 296
Query: 432 ELEVVKGKI-KACKSEEEVQSLK--FTEKNLINKI---------YTDSAEAKIPAVLDYL 479
+L+ + + K K + + L+ L + + + A K+ + L
Sbjct: 297 DLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLL 356
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
+ G + L+F+ MLD + + R+DG R + F ++ +
Sbjct: 357 AFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IF 415
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGGVG+ LTAA TVIF + + P + +QA RAHRIGQ SV V L+ DTV
Sbjct: 416 VFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTV 475
Query: 600 DDIVWDVVRSKLENLGQVLDGHENSL 625
++IV+ SKL+ +++G +L
Sbjct: 476 EEIVYRKAASKLQLTNMIIEGGHFTL 501
>gi|403216395|emb|CCK70892.1| hypothetical protein KNAG_0F02250 [Kazachstania naganishii CBS
8797]
Length = 1150
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 231/492 (46%), Gaps = 53/492 (10%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDV- 216
E+Y + P + +L P+Q G+ + + + G +LADEMGLGKT+Q I+ R V
Sbjct: 128 EEYRESPKFVNGELRPYQIQGLNWLISLHKTGLSGILADEMGLGKTLQTISFLGYLRYVE 187
Query: 217 ---WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P L++ P S +W I +W E+ ++ Q R+ R +
Sbjct: 188 KICGPFLVIAPKSTLNNWLREINRWT----PEVNALVLQGDKEERAALL-----RDRILA 238
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
D + SY++++K ++ + +++ +I DE+H +KN ++ + + + LL+
Sbjct: 239 CDFDVVVTSYELIIKEKSYMKKIDWEYIIIDEAHRIKNEESMLSQVIREFTSRNR--LLI 296
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE----ELHNLM 389
+GTP + EL+ L L PD++ N ++ F N E +LH ++
Sbjct: 297 TGTPLQNNLHELWALLNFLLPDIFSNSQDFD------AWFSSEASEENKEKIVKQLHTVL 350
Query: 390 KATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEE 447
+ ++RR+K +V L K+ +++ ++ R+ Y L ++++ V G +S+
Sbjct: 351 QP-FLLRRIKSEVETSLLPKQEMNLYVGMSSM-QRKWYKQILEKDIDAVNGSNGNKESKT 408
Query: 448 EVQSLKFTEKNLINKIYT-DSAEAKIP--------------AVLDYLETVIEA-GCKFLI 491
+ ++ + N Y D AE P VLD L +A G + LI
Sbjct: 409 RLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVFNSAKLKVLDRLLAKWKAEGSRVLI 468
Query: 492 FAHHQPMLDAIHQ-LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGG 549
F+ +LD + FL+ +C RIDG T R + E+ D K +L+ +AGG
Sbjct: 469 FSQMSRLLDILEDYCFLRSYSYC-RIDGSTDHEDRIRSIDEYNAPDSEKFIFLLTTRAGG 527
Query: 550 VGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRS 609
+G+ LT+A V+ + W P +QA DRAHRIGQ V V+ + + +V+D + +
Sbjct: 528 LGINLTSADIVVLFDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTDVSVEDKILERATQ 587
Query: 610 KLE--NLGQVLD 619
KLE ++G D
Sbjct: 588 KLETGSIGHTAD 599
>gi|52545542|emb|CAH56404.1| hypothetical protein [Homo sapiens]
Length = 1059
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 67 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 126
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 127 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 183
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 184 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 241
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 242 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 291
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 292 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 348
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 349 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 408
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 409 MLLQKMLKKLRDEGHRLLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 468
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 469 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 528
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 529 RFVTRASVEERITQVAKRKM 548
>gi|402550815|ref|YP_006599535.1| SNF2 family helicase [Mycoplasma genitalium M2321]
gi|401799510|gb|AFQ02827.1| SNF2 family helicase [Mycoplasma genitalium M2321]
Length = 1031
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 224/463 (48%), Gaps = 43/463 (9%)
Query: 172 SKLLPFQRDGVRF--AL---QHGGRILLADEMGLGKTIQAI-AVATCF---RDVWPVLIL 222
+ L +Q++GV++ AL Q GG +LADEMGLGKT Q I A+ + + + P LI+
Sbjct: 576 NNLRKYQKEGVKWIRALEDNQFGG--ILADEMGLGKTAQVIFAMLDSYQSTKSLLPSLII 633
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+SL L+W + Q++ P +IV N + + + K I L FN++
Sbjct: 634 VPASLLLNWKSEFQKF--APHVKIVT-----ANGNFKERSQIYESLKNQILLMS-FNVLR 685
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
D+ + F V+ DE+ +KN + T A I K + L L+GTP +R
Sbjct: 686 SDI-----KWISQKKFHYVVIDEAQGIKNENSTVTKAAKKI--KGNFCLALTGTPIENRL 738
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT--VMIRRLKK 400
++L+ + + P+ N ++ +++ + N E LMK T ++RR K
Sbjct: 739 LDLWSCFDFVLPNFLGNKKQFSDQF---------EKEKNDESFQKLMKKTSPFILRRTKN 789
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLI 460
VL +LP K ++++++E + +++Y + + + K K+ + SL +++
Sbjct: 790 KVLKELPKKIITDIYVELSE-EHQKLYDKQKTDGLKEIKESDAKNALNILSLILKLRHIC 848
Query: 461 -----NKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
N + +K A L+ + +E K ++F ++D Q +K+ +
Sbjct: 849 SLVKDNDVNDFEDNSKANAALNIIYEALENKRKVILFTQFLDVIDCFKQTLKNQKIDHLV 908
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
DG +R ++ +F + + S+KAGGVG+ LTAA VI ++ W QA
Sbjct: 909 FDGRKTVKNRNTIIQKFNSAKEPCVMLASLKAGGVGINLTAAEVVIHFDVWWNSAVENQA 968
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
DRAHRIGQ +V VY ++A +T+++ V V K E + + L
Sbjct: 969 TDRAHRIGQSKTVQVYRIIAKNTIEERVCQVQNQKQELVKKTL 1011
>gi|308475524|ref|XP_003099980.1| hypothetical protein CRE_20884 [Caenorhabditis remanei]
gi|308266032|gb|EFP09985.1| hypothetical protein CRE_20884 [Caenorhabditis remanei]
Length = 1429
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 237/482 (49%), Gaps = 64/482 (13%)
Query: 173 KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFRDV----WPVLILTPS 225
KL P+Q G+ + + + +LADEMGLGKTIQ I++ T +V P L++ P
Sbjct: 486 KLKPYQLKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLLTYLMEVKQNNGPYLVIVPL 545
Query: 226 SLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--SY 283
S +W + +W P+ V+ + R V + KR +D FN++ +Y
Sbjct: 546 STLSNWQSEFAKW---APNVKSVIYKGTKDARRR----VEAQIKR---VD--FNVLMTTY 593
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
+ V+K + +L +K +I DE H LKN+++K T+ L KAQ+ LLL+GTP ++
Sbjct: 594 EYVIKEKGLLGKIRWKYMIIDEGHRLKNSESKLTS-NLNTYFKAQHRLLLTGTPLQNKLP 652
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE-------LHNLMKATVMIR 396
EL+ L L P ++ + + + + + N EE LH +++ ++R
Sbjct: 653 ELWALLNFLLPSIFTSCETFEEWFNAPFITAGEKVELNQEETMLIIRRLHKVLRP-FLLR 711
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT- 455
RLKK+V ++LP K + D++ ++++ ++R ++ KG + K +SL T
Sbjct: 712 RLKKEVESELPDKTEYVIKCDMSA--LQKV--IYRHMK--KGLLLDAKMSSGARSLSNTI 765
Query: 456 --EKNLINKIY-----TDSAEA-------------KIPAVLDYLETVI----EAGCKFLI 491
+ L N + DS ++ L+ L+ ++ G + L+
Sbjct: 766 VHLRKLCNHPFLFETIEDSCRTHWKVNEVSGKDLMRVAGKLELLDRILPKLKATGHRVLM 825
Query: 492 FAHHQPMLDAIHQLFLKKKVHC-IRIDGGTPPASRQALVTEFQEKD-DVKAAVLSMKAGG 549
F M+D I + +L + H +R+DG T P R L++ + D + +LS +AGG
Sbjct: 826 FFQMTKMMD-IFEDYLHFRNHTYLRLDGSTKPDERGELLSLYNAPDSEYFLFMLSTRAGG 884
Query: 550 VGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRS 609
+GL L A TVI + W P +QA+DRAHRIGQ V V L+ ++V++ + V R
Sbjct: 885 LGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEEKMLAVARY 944
Query: 610 KL 611
KL
Sbjct: 945 KL 946
>gi|67541879|ref|XP_664707.1| hypothetical protein AN7103.2 [Aspergillus nidulans FGSC A4]
gi|40742118|gb|EAA61308.1| hypothetical protein AN7103.2 [Aspergillus nidulans FGSC A4]
gi|259483574|tpe|CBF79076.1| TPA: DNA repair protein Rhp26/Rad26, putative (AFU_orthologue;
AFUA_4G03840) [Aspergillus nidulans FGSC A4]
Length = 1193
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 137/504 (27%), Positives = 228/504 (45%), Gaps = 68/504 (13%)
Query: 157 PDLR-EKYDQIPAHIESKLLPFQRDGVRFAL-----QHGGRILLADEMGLGKTIQAIAVA 210
PDL + +IP I L +Q+ GV++ Q GG ++ DEMGLGKTIQAIA
Sbjct: 380 PDLHLDNGYRIPGDIHPLLFDYQKTGVQWMWELHQQQVGG--IIGDEMGLGKTIQAIAFL 437
Query: 211 TCF----RDVWPVLILTPSSLRLHWAAMIQQW--------LNIPPSEIVVVLSQ------ 252
R P++++ P+++ W +W L+ S +V + S+
Sbjct: 438 AGLHYSKRLTKPIIVVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESSREDA 497
Query: 253 ------LGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADES 306
G + SG KR + +G + +Y + ++L+ + I DE
Sbjct: 498 LMYGTYWSGGSSSGLKAARKVVKRVVE-EGHVLVTTYSGLQSYASLLIPVEWGGTILDEG 556
Query: 307 HFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNR 366
H ++N T + + + ++LSGTP + EL+ + ++P + + N+
Sbjct: 557 HKIRNPNTSITMHAKEL--RTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQ 614
Query: 367 YCKGGVFGIYQGASN---------HEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLD 417
+ G Y ASN E L + + + +++R K DV A LP K Q +F
Sbjct: 615 FEFPIRQGGYANASNLQVQTAAKCAETLKDAI-SPYLLQRFKIDVAADLPKKSEQVLFCR 673
Query: 418 VAEKDMRQIYALF---RELE-VVKGKI----------KACKSEE-EVQSLKFTEKNLINK 462
+ K RQ Y F E++ +++G+ K C + + L + + N N
Sbjct: 674 LT-KPQRQAYEAFLGSEEMQSILRGRRQVLYGVDILRKICNHPDLQNHKLLYAKPNYGNP 732
Query: 463 IYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKK--KVHCIRIDGGT 520
+ K+ V LE E G K L+FA H+ MLD + + F+K + R+DG T
Sbjct: 733 TKS----GKMQVVRSLLELWKETGHKTLLFAQHRIMLDILEK-FVKSLSGFNYRRMDGTT 787
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
P RQ +V EF + D+ +L+ K GG+G+ LT A VI + W P +QA +RA
Sbjct: 788 PIQHRQTMVDEFNKDPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAW 847
Query: 581 RIGQVSSVNVYYLLANDTVDDIVW 604
R+GQ V +Y L+ T+++ ++
Sbjct: 848 RLGQKRDVTIYRLMTAGTIEEKIY 871
>gi|153940180|ref|YP_001390936.1| SNF2 family helicase [Clostridium botulinum F str. Langeland]
gi|384461982|ref|YP_005674577.1| Snf2 family helicase [Clostridium botulinum F str. 230613]
gi|152936076|gb|ABS41574.1| helicase, Snf2 family [Clostridium botulinum F str. Langeland]
gi|295318999|gb|ADF99376.1| helicase, Snf2 family [Clostridium botulinum F str. 230613]
Length = 1097
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/506 (25%), Positives = 246/506 (48%), Gaps = 48/506 (9%)
Query: 153 ASAAPDLREKYDQIPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAI 207
+S ++ + + ++P + + L +Q G R+ ++ GG +LADEMGLGKTIQ I
Sbjct: 626 SSRITNINDDHYEVPKKLNATLREYQIAGYRWMKILSNMKFGG--ILADEMGLGKTIQTI 683
Query: 208 AVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSN 267
+ + + LI+TP+SL +W Q++ + + + GS ++
Sbjct: 684 SFLLSEKGI-KSLIVTPTSLIYNWQDEFQKFAE------TLKIGVIHGSKEERMKVLDDR 736
Query: 268 TKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKA 327
+ ++ L +Y + + F I DE +KN A+ T + I K
Sbjct: 737 EEYDVLL------TTYGTLKNDIQLYKDITFDYCIIDEGQNIKNPLAQSTDSVKRINSKV 790
Query: 328 QYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHN 387
++AL +GTP + +EL+ + + P + + ++ I + +N ++L
Sbjct: 791 RFAL--TGTPIENNLMELWSIFDFIMPGYLYSEERFQEKF-------IDKVEANIDKLKT 841
Query: 388 LMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE 447
L++ ++ RR KKDVL LP K ++ +++ D +IY + ++ +K K+K K ++
Sbjct: 842 LIRPFIL-RREKKDVLKDLPHKIEKKFLVEMTT-DQERIYKAY--MKSIKEKLKNNKEDK 897
Query: 448 --------EVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
++ L +I++ S++ +I ++ ++ ++ G K L+F+ +L
Sbjct: 898 ITIFSYLTRLRQLCLDPSIIIDEYKGGSSKLRIA--MELVQEGVDEGKKILLFSQFTSVL 955
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
I +L K+ + +DG T + R LV +F + VK ++S+KAGG GL LT+A+
Sbjct: 956 KNISRLLKKECIEYFYLDGSTNASERIKLVDKFNKNSHVKVFLISLKAGGTGLNLTSANL 1015
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
VI + W P QA DRAHRIGQ + V V L+ T+++ + + K E + V++
Sbjct: 1016 VIHFDPWWNPAVEDQATDRAHRIGQKNLVQVIKLVCKGTIEEKIIMLQEDKKELINNVMN 1075
Query: 620 GHENSLEVSSSQIRSSPAKQKTLDSF 645
++ S + ++ +K++ LD F
Sbjct: 1076 S-----DLKSGNLINTLSKEEILDLF 1096
>gi|403279221|ref|XP_003931158.1| PREDICTED: probable global transcription activator SNF2L1 [Saimiri
boliviensis boliviensis]
Length = 976
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 230/481 (47%), Gaps = 61/481 (12%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 121 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 177
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 178 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 230
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 231 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 288
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 289 DFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 343
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 344 MQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 401
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 402 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 461
Query: 524 SRQA--LVTEFQEKDDVKAA-----------VLSMKAGGVGLTLTAASTVIFAELSWTPG 570
R+ L EF+ + + A +LS +AGG+G+ L +A VI + W P
Sbjct: 462 EREDKFLEVEFRGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 521
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENS 624
+QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D N
Sbjct: 522 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 581
Query: 625 L 625
L
Sbjct: 582 L 582
>gi|323349632|gb|EGA83848.1| Isw1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 1101
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 234/501 (46%), Gaps = 39/501 (7%)
Query: 162 KYDQIPAHIESKLLPFQRDGVRFALQ-HGGRI--LLADEMGLGKTIQAIAVATCFRDV-- 216
++ + PA++ +L P+Q GV + + H +I +LADEMGLGKT+Q I+ R +
Sbjct: 156 QFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEK 215
Query: 217 --WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P S +W I +W P + L G ++ K+ +
Sbjct: 216 IPGPFLVIAPKSTLNNWLREINRW--TPDVNAFI----LQGDKEERAELIQ---KKLLGC 266
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
D I SY+++++ ++ L N++ +I DE+H +KN ++ + + + LL++
Sbjct: 267 DFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNR--LLIT 324
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVM 394
GTP + EL+ L L PD++ + ++ + + ++LH +++ +
Sbjct: 325 GTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIV--KQLHTVLQP-FL 381
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF-RELEVVKGKIKACKSEEEVQSLK 453
+RR+K DV L K+ +++ ++ + + ++L+ V G + +S+ + ++
Sbjct: 382 LRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIM 441
Query: 454 FTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAHHQP 497
+ N Y D AE P D L+ + E G + LIF+
Sbjct: 442 MQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKLKEXGSRVLIFSQMSR 501
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTA 556
+LD + + RIDG T R + ++ D K +L+ +AGG+G+ LT+
Sbjct: 502 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTS 561
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A V+ + W P +QA DRAHRIGQ V V+ L+ +++V++ + + KL
Sbjct: 562 ADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQL 621
Query: 617 VLDGHENSLEVSSSQIRSSPA 637
V+ + SL+ ++ S A
Sbjct: 622 VIQQNRTSLKKKENKADSKDA 642
>gi|365766942|gb|EHN08431.1| Isw1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1129
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 234/501 (46%), Gaps = 39/501 (7%)
Query: 162 KYDQIPAHIESKLLPFQRDGVRFALQ-HGGRI--LLADEMGLGKTIQAIAVATCFRDV-- 216
++ + PA++ +L P+Q GV + + H +I +LADEMGLGKT+Q I+ R +
Sbjct: 184 QFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEK 243
Query: 217 --WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P S +W I +W P + L G ++ K+ +
Sbjct: 244 IPGPFLVIAPKSTLNNWLREINRW--TPDVNAFI----LQGDKEERAELIQ---KKLLGC 294
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
D I SY+++++ ++ L N++ +I DE+H +KN ++ + + + LL++
Sbjct: 295 DFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNR--LLIT 352
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVM 394
GTP + EL+ L L PD++ + ++ + + ++LH +++ +
Sbjct: 353 GTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIV--KQLHTVLQP-FL 409
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF-RELEVVKGKIKACKSEEEVQSLK 453
+RR+K DV L K+ +++ ++ + + ++L+ V G + +S+ + ++
Sbjct: 410 LRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIM 469
Query: 454 FTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAHHQP 497
+ N Y D AE P D L+ + E G + LIF+
Sbjct: 470 MQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSR 529
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTA 556
+LD + + RIDG T R + ++ D K +L+ +AGG+G+ LT+
Sbjct: 530 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTS 589
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A V+ + W P +QA DRAHRIGQ V V+ L+ +++V++ + + KL
Sbjct: 590 ADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQL 649
Query: 617 VLDGHENSLEVSSSQIRSSPA 637
V+ + SL+ ++ S A
Sbjct: 650 VIQQNRTSLKKKENKADSKDA 670
>gi|325181909|emb|CCA16363.1| ChromodomainhelicaseDNAbinding protein 8 putative [Albugo laibachii
Nc14]
Length = 2334
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 140/494 (28%), Positives = 222/494 (44%), Gaps = 54/494 (10%)
Query: 157 PDLREKYDQIPAHI-ESKLLPFQRDGVR---FALQHGGRILLADEMGLGKTIQAIAVATC 212
P KY + P + ++KL +Q +G+ F + +LADEMGLGKT+QA ++
Sbjct: 1200 PTTWAKYQESPVYNNQNKLRSYQLEGLNWLVFCWYNRRNCILADEMGLGKTVQATSIMEH 1259
Query: 213 FRDV----WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN------RSGFT 262
R P L++ P + +W I+ W + VV GGS+ F
Sbjct: 1260 LRQQEHIRGPFLVIAPLATLGNWKREIETWTTM---NCVVYHDSEGGSDIRSFIREQEFY 1316
Query: 263 IVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAAT 320
S+ R + FN++ SY ++ L +++ ++ DE+H LKN + K +
Sbjct: 1317 YKQSDMYRRRGI-YKFNVLVTSYQTLMADAEFLECIHWRYLVIDEAHKLKNRETKLLQSL 1375
Query: 321 LPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGAS 380
+ A LL++GTP + EL+ L + P+ + + ++ N Y G + Q A
Sbjct: 1376 MHFTWDA--CLLMTGTPLQNGVFELWCLLNFIEPEKFPSQQQFYNDY--GDLATADQVAR 1431
Query: 381 NHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA-----EKDMRQIYALFREL-- 433
HE+L M+RR+K+DV +P K ++ +DV +K R I+ R
Sbjct: 1432 LHEQLR-----PYMLRRVKEDVEKSIPPK--EETIIDVELTTLQKKYYRAIFERNRAFLN 1484
Query: 434 EVVKGKI-----------KACKSEEEVQSLKFTEKNLINKIYTD----SAEAKIPAVLDY 478
+ G + K C ++ ++ E + +N+I A K +
Sbjct: 1485 QGAAGSVANLVNVEMELRKCCNHPFLIRGVEEKECSRLNEIQRSKILVQASGKTVLLDKM 1544
Query: 479 LETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE-KDD 537
L K LIF+ + MLD I L + R+DG RQA + F K D
Sbjct: 1545 LAKFRAEEKKILIFSQFKMMLDVIEDLCHLRGYQIERMDGSVRGNLRQAAIDRFNNPKSD 1604
Query: 538 VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLAND 597
A +LS +AGGVG+ L AAS VI + W P + +QA R HRIGQ SVN+Y L+
Sbjct: 1605 TFAFLLSTRAGGVGINLIAASVVILYDSDWNPQNDLQAVARCHRIGQTKSVNIYRLVTKK 1664
Query: 598 TVDDIVWDVVRSKL 611
T + ++D+ KL
Sbjct: 1665 TYEAQMFDIASKKL 1678
>gi|383851360|ref|XP_003701201.1| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
[Megachile rotundata]
Length = 1967
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 227/501 (45%), Gaps = 64/501 (12%)
Query: 158 DLREKYDQIPAHIES---KLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VA 210
DL++KY++ P +++ +L P+Q +G+ R++ G +LADEMGLGKTIQ I +
Sbjct: 702 DLKKKYERQPEYLDQTGMQLHPYQLEGLNWLRYSWGQGIDTILADEMGLGKTIQTITFLY 761
Query: 211 TCFRD---VWPVLILTPSSLRLHWAAMIQQW---------LNIPPSEIVVVLSQLG---G 255
+ +++ P L+ P S ++W + W + S IV+ ++L G
Sbjct: 762 SLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDKDSRIVIRENELSFEEG 821
Query: 256 SNRSGFT--IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQ 313
+ R G I S+ K N+ L SY+++ L S ++ +++ DE+H LK+ Q
Sbjct: 822 AVRGGRASKIRSNQIKFNVLL------TSYELISIDSACLGSIDWAVLVVDEAHRLKSNQ 875
Query: 314 AK--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGG 371
+K R A+ I Y LLL+GTP + ELF L L D + ++ + N
Sbjct: 876 SKFFRLLASYNIA----YKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLAAFQNE----- 926
Query: 372 VFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI-YALF 430
F ++LH L+ M+RRLK DVL +P K V ++++ + Y L
Sbjct: 927 -FADISKEEQVKKLHELL-GPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILT 984
Query: 431 RELEVVKGK---------------IKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAV 475
R E + K K C + N Y SA K
Sbjct: 985 RNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAASQEAPTAPNGTYETSALIKAAGK 1044
Query: 476 LDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTE 531
L L ++ + G + LIF+ MLD + + RIDG A RQ +
Sbjct: 1045 LVLLSKMLRKLRDDGHRVLIFSQMTKMLDILEDYLEGEGYKYERIDGNITGAQRQEAIDR 1104
Query: 532 FQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNV 590
F + +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ + V +
Sbjct: 1105 FNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMI 1164
Query: 591 YYLLANDTVDDIVWDVVRSKL 611
Y + ++V++ V V + K+
Sbjct: 1165 YRFVTRNSVEERVTQVAKRKM 1185
>gi|291408167|ref|XP_002720326.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a1-like isoform 1 [Oryctolagus
cuniculus]
Length = 1053
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 232/481 (48%), Gaps = 61/481 (12%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 198 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 254
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 255 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 307
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 308 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 365
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH+++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 366 DFDSWFDTKNCLGDQKLV---ERLHSVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 420
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 421 MQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 478
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 479 HIVNNSGKMLVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 538
Query: 524 SRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWTPG 570
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W P
Sbjct: 539 EREDKFLEVELLGQREAIEAFNVPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 598
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENS 624
+QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D N
Sbjct: 599 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 658
Query: 625 L 625
L
Sbjct: 659 L 659
>gi|26554357|ref|NP_758291.1| helicase/SNF2 domain-containing protein [Mycoplasma penetrans HF-2]
gi|26454367|dbj|BAC44695.1| helicase with SNF2 domain [Mycoplasma penetrans HF-2]
Length = 1041
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 240/498 (48%), Gaps = 65/498 (13%)
Query: 164 DQIPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAIAVATCFRDVW- 217
+++P ++++ L +Q G + L GG +LADEMGLGKT+Q I++ + DV+
Sbjct: 567 NELPVNLKNILKKYQVAGYLWLKKLLHLNAGG--ILADEMGLGKTMQTISLLS---DVYY 621
Query: 218 ------PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRN 271
P LI+ PSSL +W + Q+ P +I + I + +RN
Sbjct: 622 NNKTKLPSLIVCPSSLVYNWKKELSQF--APFLKIGI--------------IDGTQLERN 665
Query: 272 IPLDGLFN----IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKA 327
L+ + N + SY ++ K + + F + + DE+ +KN + + T + +
Sbjct: 666 EVLNNIHNYQIIVTSYHLLNKDIEVYRNMEFYLQVLDEAQKIKNHYTQFSKDTKSV--NS 723
Query: 328 QYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG---ASNHEE 384
+Y + L+GTP + +EL+ + + P G Y ++Q A + E
Sbjct: 724 KYKIALTGTPIENNLLELWSIFDYIMP---------GFLYDYKLFKSLFQDKIIAKDEEA 774
Query: 385 LHNLMK--ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKA 442
L L + ++RR K++VL +LP K + + + +K YA + ++ K
Sbjct: 775 LKKLKTKISPFILRRTKEEVLKELPSKTYKIMTCEFEDKQKEMYYAELSKSQIAIRKGIE 834
Query: 443 CKSEEEVQSLKFTEKNLINKIY---------TDSAEAKIPAVLDYLETVIEAGCKFLIFA 493
K+ + + F+ + +I +D +K +D ++ +I+ K L+F+
Sbjct: 835 DKTINKQGAFIFSVLTKLRQICCSPKLSYENSDINGSKFNLCIDLIKDLIKNNDKILLFS 894
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLT 553
M+D I Q K K++ + + G T R LV EF K+++K ++S+KAGG GLT
Sbjct: 895 QFTSMIDLIAQELKKLKINFLVLTGETNKKERMELVNEFNNKNNIKIFLISLKAGGTGLT 954
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLEN 613
LT+A+ VI + W QA DRAHRIGQ +V +Y L+ D++++ + + SK E
Sbjct: 955 LTSANAVIHYDPWWNLSLENQATDRAHRIGQEKNVFIYKLIVKDSIEEKILSLQESKREI 1014
Query: 614 LGQVLD---GHENSLEVS 628
+ Q+ D ++NS+ ++
Sbjct: 1015 INQIFDENSSNKNSININ 1032
>gi|419779968|ref|ZP_14305820.1| bacterial SNF2 helicase associated [Streptococcus oralis SK100]
gi|383185732|gb|EIC78226.1| bacterial SNF2 helicase associated [Streptococcus oralis SK100]
Length = 1031
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 227/481 (47%), Gaps = 54/481 (11%)
Query: 170 IESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FRDVWPVLILT 223
+++ L +Q GVR+ L H GG +LAD+MGLGKT+Q IA T + VLIL
Sbjct: 578 VQASLRDYQEKGVRWLQMLHHYGFGG--ILADDMGLGKTLQTIAFLTSQVTEDSRVLILA 635
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
PS L +WA +++ P ++ VV +NR I+S N + + SY
Sbjct: 636 PSGLIYNWADEFRKF--APQLDLAVVHGL--KANREA--ILSENHQ--------IYVTSY 681
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
+ + F + DE+ +KNAQ K + + A +AL SGTP +
Sbjct: 682 ATFRQDSELYQEMAFDFLFLDEAQVMKNAQTKIAQSLRQFVVPAVFAL--SGTPIENHLG 739
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVL 403
EL+ + + P + + E+ E + +K VM RR K++VL
Sbjct: 740 ELWSIFQIVLPGLLPSKKEFMKLPA--------------ERVAQFIKPFVM-RRKKEEVL 784
Query: 404 AQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE------EVQSLKFTEK 457
+LP + V+ + E + IY +L+ ++ ++ +E E+ S +
Sbjct: 785 TELP-DLIEVVYKNELEDQQKAIY--LAQLQQMRDRLAQVTDQEFQRSRVEILSGLMRLR 841
Query: 458 NLINK--IYTD---SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
+ + ++ D A K+ ++ D L V + G + LIF+ + ML+ I + +
Sbjct: 842 QICDTPALFMDDYQGASGKLDSLRDLLLQVADGGHRVLIFSQFKGMLEKIEKELPDLGLT 901
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
+I G TP RQ + F + + A ++S+KAGGVGL LT A TVI +L W P
Sbjct: 902 SFKITGSTPAHDRQEMTKAFNQGER-DAFLISLKAGGVGLNLTGADTVILVDLWWNPAVE 960
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
QA RAHR+GQ V VY L+ T+++ + ++ K + QVLDG E+ +S ++I
Sbjct: 961 AQAIGRAHRMGQEQMVEVYRLITKGTIEEKIQELQEQKKHLVSQVLDGTESRASLSLAEI 1020
Query: 633 R 633
R
Sbjct: 1021 R 1021
>gi|340726708|ref|XP_003401695.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein Mi-2 homolog [Bombus terrestris]
Length = 1974
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 227/501 (45%), Gaps = 64/501 (12%)
Query: 158 DLREKYDQIPAHIES---KLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VA 210
DL++KY++ P +++ +L P+Q +G+ R++ G +LADEMGLGKTIQ I +
Sbjct: 710 DLKKKYERQPEYLDQTGMQLHPYQLEGLNWLRYSWGQGIDTILADEMGLGKTIQTITFLY 769
Query: 211 TCFRD---VWPVLILTPSSLRLHWAAMIQQW---------LNIPPSEIVVVLSQLG---G 255
+ +++ P L+ P S ++W + W + S IV+ ++L G
Sbjct: 770 SLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDKDSRIVIRENELSFEEG 829
Query: 256 SNRSGFT--IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQ 313
+ R G I S+ K N+ L SY+++ L S ++ +++ DE+H LK+ Q
Sbjct: 830 AVRGGRASKIRSNQIKFNVLL------TSYELISIDSACLGSIDWAVLVVDEAHRLKSNQ 883
Query: 314 AK--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGG 371
+K R A+ I Y LLL+GTP + ELF L L D + ++ + N
Sbjct: 884 SKFFRLLASYNIA----YKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLAAFQNE----- 934
Query: 372 VFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI-YALF 430
F ++LH L+ M+RRLK DVL +P K V ++++ + Y L
Sbjct: 935 -FADISKEEQVKKLHELL-GPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILT 992
Query: 431 RELEVVKGK---------------IKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAV 475
R E + K K C + N Y SA K
Sbjct: 993 RNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAASQEAPTAPNGSYETSALIKAAGK 1052
Query: 476 LDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTE 531
L L ++ + G + LIF+ MLD + + RIDG A RQ +
Sbjct: 1053 LVLLSKMLKKLRDDGHRVLIFSQMTKMLDILEDYLEGEGYKYERIDGNITGAQRQEAIDR 1112
Query: 532 FQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNV 590
F + +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ + V +
Sbjct: 1113 FNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMI 1172
Query: 591 YYLLANDTVDDIVWDVVRSKL 611
Y + ++V++ V V + K+
Sbjct: 1173 YRFVTRNSVEERVTQVAKRKM 1193
>gi|223936025|ref|ZP_03627939.1| Non-specific serine/threonine protein kinase [bacterium Ellin514]
gi|223895247|gb|EEF61694.1| Non-specific serine/threonine protein kinase [bacterium Ellin514]
Length = 1046
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/485 (28%), Positives = 218/485 (44%), Gaps = 47/485 (9%)
Query: 168 AHIESKLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIAVATCFRDV----WPVL 220
++S L P+Q++GV +F +G +LADEMGLGKT+Q +A+ R + PVL
Sbjct: 576 GELDSVLRPYQKEGVAWLQFLRDNGFGGILADEMGLGKTLQVLAIINALRSLKNLNAPVL 635
Query: 221 ILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
++ P+SL +WAA ++ P VV L G S F +S I
Sbjct: 636 VVCPTSLVFNWAAEAAKFT---PELRVVALH--GPQRHSLFAEISQKD---------LVI 681
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
SY ++ + F V+ DE+ +KN Q + A I + + L+L+GTP +
Sbjct: 682 TSYALLRRDAEHYRGLEFDTVVLDEAQHIKNRQTQNAQAVKSI--RTRRRLVLTGTPLEN 739
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA--TVMIRRL 398
++L+ + L P + ++ RY V N E L + M+RRL
Sbjct: 740 SVLDLWSIFDFLMPGYLGSAQDFKERYEAPIVR-----EKNLEVQKRLARRLRPFMLRRL 794
Query: 399 KKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL---EVV---------KGKIKACKSE 446
K++V LP K Q + ++ E R +Y E E+V K ++ +
Sbjct: 795 KREVAKDLPEKIEQVSYCELNE-GQRALYQQVLEASRKEIVNAVDANGLNKSRMVVLTAL 853
Query: 447 EEVQSLKFTEKNLINKIYTDSAE--AKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
++ + + L +K+ +E K+ + LE V++ G + L+F+ ML + +
Sbjct: 854 LRLRQICCDLRLLESKLEAKPSEPSGKVELFGELLEEVVDGGHRVLVFSQFTTMLGLLRE 913
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
+ + +DG T R +V FQ + ++S+KAGG GL LT A TVI +
Sbjct: 914 RLAAENIEFCYLDGAT--KDRAQVVERFQRDSRIPVFLISLKAGGTGLNLTGADTVIHFD 971
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENS 624
W P QA DRAHRIGQ V Y L+ TV++ + ++ K +L G E
Sbjct: 972 PWWNPAVEAQATDRAHRIGQKRVVTSYKLITRGTVEEKILNLQTRKRALFQGMLGGEEQL 1031
Query: 625 LEVSS 629
E S
Sbjct: 1032 AEALS 1036
>gi|452820375|gb|EME27418.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria
sulphuraria]
Length = 1267
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/486 (27%), Positives = 225/486 (46%), Gaps = 64/486 (13%)
Query: 174 LLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCF----RDV-WPVLILTPS 225
L P+Q +G+++ + + +LADEMGLGKTIQ IA C+ +++ P LI+ P
Sbjct: 511 LKPYQLEGLQWLISLFNNNLNGILADEMGLGKTIQTIA-CLCYLMEKKNINGPFLIVVPL 569
Query: 226 SLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--SY 283
S +W QW P + V+ G +++ + G FN++ +Y
Sbjct: 570 STMSNWIREFDQW---APHIVKVIYR--------GDPTTRRQIQQHEMVAGTFNVLLTTY 618
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
+ V++ ++ L ++ +I DE H +KNA K A TL + ++ LLL+GTP +
Sbjct: 619 EYVIRDKSALSRVKWRYIIIDEGHRMKNAHCK-LAMTLGVKYHSRNRLLLTGTPLQNNLH 677
Query: 344 ELFKQLEALYPDVYK---NVHEYGNRYCKGGVFGIYQGASNHE------ELHNLMKATVM 394
EL+ L L P+++ N + N + G E LH +++ +
Sbjct: 678 ELWALLNFLLPNIFSSSDNFEAWFNAPFQSSALGETAELDEEETMLIINRLHQVLRP-FL 736
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKG-KIKACKSEEEVQSLK 453
+RR+K DV +QLP K + +++ L+R++ G I+ + +L
Sbjct: 737 LRRMKSDVESQLPEKTEHVINCELSAWQK----VLYRQISSKGGIAIREGSAAATFNNLI 792
Query: 454 FTEKNLINK---IYTDSAEAKIPAVLDYLETVIEAGCKFL-----------------IFA 493
+ + N Y D ++P E VI A KFL IF
Sbjct: 793 MQMRKVCNHPFLFYYDEDIDQLPR-----EYVIRASGKFLFLSRVLPKLRASGHRVLIFT 847
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD-DVKAAVLSMKAGGVGL 552
+ +LD + L + +R+DG T R L+ F + D + A +LS +AGG+GL
Sbjct: 848 QMRKVLDFLQSLLEFLGIKFLRLDGTTKSDERVDLLEAFNDPDSEYFAFLLSTRAGGLGL 907
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L +A TVI + W P +QA+DRAHRIGQ V V+ L+ + TV++ + + + KL
Sbjct: 908 NLQSADTVIIFDSDWNPMMDMQAQDRAHRIGQTREVKVFRLVCSGTVEEKILEQAQKKLN 967
Query: 613 NLGQVL 618
QV+
Sbjct: 968 MDAQVI 973
>gi|6319722|ref|NP_009804.1| chromatin-remodeling ATPase ISW1 [Saccharomyces cerevisiae S288c]
gi|2506238|sp|P38144.2|ISW1_YEAST RecName: Full=ISWI chromatin-remodeling complex ATPase ISW1
gi|1872131|emb|CAA85208.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285810576|tpg|DAA07361.1| TPA: chromatin-remodeling ATPase ISW1 [Saccharomyces cerevisiae
S288c]
Length = 1129
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 234/501 (46%), Gaps = 39/501 (7%)
Query: 162 KYDQIPAHIESKLLPFQRDGVRFALQ-HGGRI--LLADEMGLGKTIQAIAVATCFRDV-- 216
++ + PA++ +L P+Q GV + + H +I +LADEMGLGKT+Q I+ R +
Sbjct: 184 QFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEK 243
Query: 217 --WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P S +W I +W P + L G ++ K+ +
Sbjct: 244 IPGPFLVIAPKSTLNNWLREINRW--TPDVNAFI----LQGDKEERAELIQ---KKLLGC 294
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
D I SY+++++ ++ L N++ +I DE+H +KN ++ + + + LL++
Sbjct: 295 DFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNR--LLIT 352
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVM 394
GTP + EL+ L L PD++ + ++ + + ++LH +++ +
Sbjct: 353 GTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIV--KQLHTVLQP-FL 409
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF-RELEVVKGKIKACKSEEEVQSLK 453
+RR+K DV L K+ +++ ++ + + ++L+ V G + +S+ + ++
Sbjct: 410 LRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIM 469
Query: 454 FTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAHHQP 497
+ N Y D AE P D L+ + E G + LIF+
Sbjct: 470 MQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSR 529
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTA 556
+LD + + RIDG T R + ++ D K +L+ +AGG+G+ LT+
Sbjct: 530 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTS 589
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A V+ + W P +QA DRAHRIGQ V V+ L+ +++V++ + + KL
Sbjct: 590 ADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQL 649
Query: 617 VLDGHENSLEVSSSQIRSSPA 637
V+ + SL+ ++ S A
Sbjct: 650 VIQQNRTSLKKKENKADSKDA 670
>gi|402551800|ref|YP_006600518.1| SNF2 family helicase [Mycoplasma genitalium M6320]
gi|401800495|gb|AFQ03810.1| SNF2 family helicase [Mycoplasma genitalium M6320]
Length = 1014
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 220/457 (48%), Gaps = 43/457 (9%)
Query: 172 SKLLPFQRDGVRF--AL---QHGGRILLADEMGLGKTIQAI-AVATCF---RDVWPVLIL 222
+ L +Q++GV++ AL Q GG +LADEMGLGKT Q I A+ + + + P LI+
Sbjct: 576 NNLRKYQKEGVKWIRALEDNQFGG--ILADEMGLGKTAQVIFAMLDSYQSTKSLLPSLII 633
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+SL L+W + Q++ P +IV N + V + K I L FN++
Sbjct: 634 VPASLLLNWKSEFQKF--APHVKIVT-----ANGNFKERSQVYESLKNQILLMS-FNVLR 685
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
D+ + F V+ DE+ +KN + T A I K + L L+GTP +R
Sbjct: 686 SDI-----KWISQKKFHYVVIDEAQGIKNENSTVTKAAKKI--KGNFCLALTGTPIENRL 738
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT--VMIRRLKK 400
++L+ + + P+ N ++ +++ + N E LMK T ++RR K
Sbjct: 739 LDLWSCFDFVLPNFLGNKKQFSDQF---------EKEKNDESFQKLMKKTSPFILRRTKN 789
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLI 460
VL +LP K +++++ E + +++Y + + + K K+ + SL +++
Sbjct: 790 KVLKELPKKIITDIYVELRE-EHQKLYDKQKTDGLKEIKESDAKNALNILSLILKLRHIC 848
Query: 461 -----NKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
N + +K A L+ + +E K ++F ++D Q +K+ +
Sbjct: 849 SLVKDNDVNDFEDNSKANAALNIIYEALENKRKVILFTQFLDVIDCFKQTLKNQKIDHLV 908
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
DG +R ++ +F + + S+KAGGVG+ LTAA VI ++ W QA
Sbjct: 909 FDGRKTVKNRNTIIQKFNSAKEPCVMLASLKAGGVGINLTAAEVVIHFDVWWNSAVENQA 968
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
DRAHRIGQ +V VY ++A +T+++ V V K E
Sbjct: 969 TDRAHRIGQSKTVQVYRIIAKNTIEERVCQVQNQKQE 1005
>gi|301336251|ref|ZP_07224453.1| SNF2 family helicase [Chlamydia muridarum MopnTet14]
Length = 1163
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/462 (28%), Positives = 225/462 (48%), Gaps = 45/462 (9%)
Query: 162 KYDQIPAHIESKLLPFQRDGV----RFALQHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++ ++P+ I++ L +Q+DGV R H IL AD+MGLGKT+Q I T R
Sbjct: 687 EFQEVPSQIQATLRSYQKDGVHWLERLRKMHLNGIL-ADDMGLGKTLQTIIAVTQSRLEK 745
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
LI+ P+SL +W +++ P +V+ + R +SS + ++
Sbjct: 746 GGGCSLIICPTSLVYNWK---EEFRKFNPEFKTLVIDGIPSQRRKQ---LSSLEEYDVA- 798
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
I SY+++ K +I F V+ DE+H +KN + R A ++ +I+ A + L+L+
Sbjct: 799 -----ITSYNLLQKDIDIYKDFLFDYVVLDEAHHIKN-RTTRNAKSVKMIR-ACHRLILT 851
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG--ASNHEELHNLMKAT 392
GTP + EL+ + L P + + + +Y + G Y G A N E L + A
Sbjct: 852 GTPIENSLEELWSLFDFLMPGLLSSYDRFVGKYIR---IGNYMGNKADNVEALRRKV-AP 907
Query: 393 VMIRRLKKDVLAQLPVKRR--QQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQ 450
++RR+K+DVL LP L +++++ Q YA E+ ++ + E +
Sbjct: 908 FILRRMKEDVLEDLPPVSEILYHCHLTESQRELYQSYAASARQEL--SRLVKQEGFERIH 965
Query: 451 SLKFTEKNLINKIYTDSA-----------EAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
+ +I A AK ++D L +++++G K ++F+ + ML
Sbjct: 966 IHVLATLTRLKQICCHPAIFAKDTPEPGDSAKYDMLMDLLSSLVDSGHKTVVFSQYTKML 1025
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
I Q K + + +DG T +R +V +F E ++ ++S+KAGG GL L A T
Sbjct: 1026 GIIRQDLEAKGIPFVYLDGST--KNRLEIVQQFNEDPNLLVFLVSLKAGGTGLNLVGADT 1083
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 601
VI ++ W P QA DR HRIGQ SV+ Y L+ +T+++
Sbjct: 1084 VIHYDMWWNPAVENQATDRVHRIGQNRSVSSYKLVTLNTIEE 1125
>gi|395848677|ref|XP_003796975.1| PREDICTED: probable global transcription activator SNF2L1 isoform 3
[Otolemur garnettii]
Length = 1070
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 234/483 (48%), Gaps = 65/483 (13%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 199 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWV--- 255
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 256 PSLRVICF--VGDKDARAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 306
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 307 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 364
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 365 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEVKIYLGLS 420
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 421 -KMQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 477
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 478 DEHIVTNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTP 537
Query: 522 PASRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWT 568
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W
Sbjct: 538 HEEREDKFLEVELLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWN 597
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHE 622
P +QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D
Sbjct: 598 PQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQS 657
Query: 623 NSL 625
N L
Sbjct: 658 NKL 660
>gi|350424653|ref|XP_003493868.1| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
[Bombus impatiens]
Length = 1965
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 227/501 (45%), Gaps = 64/501 (12%)
Query: 158 DLREKYDQIPAHIES---KLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VA 210
DL++KY++ P +++ +L P+Q +G+ R++ G +LADEMGLGKTIQ I +
Sbjct: 701 DLKKKYERQPEYLDQTGMQLHPYQLEGLNWLRYSWGQGIDTILADEMGLGKTIQTITFLY 760
Query: 211 TCFRD---VWPVLILTPSSLRLHWAAMIQQW---------LNIPPSEIVVVLSQLG---G 255
+ +++ P L+ P S ++W + W + S IV+ ++L G
Sbjct: 761 SLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDKDSRIVIRENELSFEEG 820
Query: 256 SNRSGFT--IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQ 313
+ R G I S+ K N+ L SY+++ L S ++ +++ DE+H LK+ Q
Sbjct: 821 AVRGGRASKIRSNQIKFNVLL------TSYELISIDSACLGSIDWAVLVVDEAHRLKSNQ 874
Query: 314 AK--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGG 371
+K R A+ I Y LLL+GTP + ELF L L D + ++ + N
Sbjct: 875 SKFFRLLASYNIA----YKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLAAFQNE----- 925
Query: 372 VFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI-YALF 430
F ++LH L+ M+RRLK DVL +P K V ++++ + Y L
Sbjct: 926 -FADISKEEQVKKLHELL-GPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILT 983
Query: 431 RELEVVKGK---------------IKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAV 475
R E + K K C + N Y SA K
Sbjct: 984 RNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAASQEAPTAPNGSYETSALIKAAGK 1043
Query: 476 LDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTE 531
L L ++ + G + LIF+ MLD + + RIDG A RQ +
Sbjct: 1044 LVLLSKMLKKLRDDGHRVLIFSQMTKMLDILEDYLEGEGYKYERIDGNITGAQRQEAIDR 1103
Query: 532 FQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNV 590
F + +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ + V +
Sbjct: 1104 FNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMI 1163
Query: 591 YYLLANDTVDDIVWDVVRSKL 611
Y + ++V++ V V + K+
Sbjct: 1164 YRFVTRNSVEERVTQVAKRKM 1184
>gi|47228866|emb|CAG09381.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1286
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 227/504 (45%), Gaps = 74/504 (14%)
Query: 158 DLREKYDQ---IPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAV 209
D E++D+ +P + KL +Q+ GVR+ Q GG +L DEMGLGKTIQ I+
Sbjct: 370 DSDEEFDEGFKVPGFLWKKLFKYQQTGVRWLWELHCQQAGG--ILGDEMGLGKTIQVISF 427
Query: 210 ------------ATCFR--DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGG 255
+ +R + P +I+ P+++ W W PP V VL + G
Sbjct: 428 LAGLSYSKLRTRGSNYRYAGLGPTIIVCPATVMHQWVREFHAWW--PPFR-VAVLHETGS 484
Query: 256 SNRSGFTIVSSNTKRNIP----LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKN 311
SSN K+ IP G+ I SY V +Q+ L ++ +I DE H ++N
Sbjct: 485 --------FSSNKKKLIPEIVSCHGIL-ITSYSAVRIMQDTLQRWDWHYIILDEGHKIRN 535
Query: 312 AQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGG 371
A T A + + +LSG+P + EL+ + ++P + + ++
Sbjct: 536 PNAGVTLACKQF--RTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPI 593
Query: 372 VFGIYQGASNHE-----ELHNLMKATV---MIRRLKKDVLAQL--PVKRRQQVFLDVAEK 421
G Y AS + + +++ T+ ++RR+K DV A L P K Q +F + E
Sbjct: 594 TMGGYSNASPVQVQTAFKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCKLTE- 652
Query: 422 DMRQIYALF-----------RELEVVKGKI---KACKSEE----EVQSLKFTEKNLI--- 460
+ RQ+Y F R+++V G I K C + Q L+ ++ +
Sbjct: 653 EQRQVYRSFLDSKEVYQILNRDMQVFPGLIALRKICNHPDLFSGGPQFLRGVPEDQLAQE 712
Query: 461 NKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGT 520
++ K+ V L G + L+F + ML+ + + +++DG T
Sbjct: 713 DRFGFWKRSGKLIVVESLLRLWFRQGQRVLLFTQSRQMLNILEVFVRENNYSYLKMDGTT 772
Query: 521 PPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
+SRQ L+ + E + + +L+ K GG+G+ LT A+ VI + W P QA +RA
Sbjct: 773 SISSRQPLIARYNEDNSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAW 832
Query: 581 RIGQVSSVNVYYLLANDTVDDIVW 604
RIGQ V +Y LL T+++ ++
Sbjct: 833 RIGQTQQVTIYRLLTAGTIEEKIY 856
>gi|395848675|ref|XP_003796974.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Otolemur garnettii]
Length = 1054
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 234/483 (48%), Gaps = 65/483 (13%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 199 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWV--- 255
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 256 PSLRVICF--VGDKDARAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 306
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 307 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 364
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 365 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEVKIYLGLS 420
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 421 -KMQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 477
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 478 DEHIVTNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTP 537
Query: 522 PASRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWT 568
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W
Sbjct: 538 HEEREDKFLEVELLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWN 597
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHE 622
P +QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D
Sbjct: 598 PQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQS 657
Query: 623 NSL 625
N L
Sbjct: 658 NKL 660
>gi|227546637|ref|ZP_03976686.1| helicase [Bifidobacterium longum subsp. longum ATCC 55813]
gi|227212954|gb|EEI80833.1| helicase [Bifidobacterium longum subsp. infantis ATCC 55813]
Length = 1394
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 237/524 (45%), Gaps = 64/524 (12%)
Query: 165 QIPAHIESKLLPFQRDGVRFA---LQHGGRILLADEMGLGKTIQAIAV----------AT 211
++P ++ L P+Q +G ++ G +LADEMGLGK++Q IA+
Sbjct: 879 EVPDSLKHILRPYQVEGFQWLNTLCDKGFGGILADEMGLGKSVQLIALLLSRYQRNTGEM 938
Query: 212 CFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRN 271
+ P LI+ P+SL +W A ++ PS VV++ R T + + +
Sbjct: 939 GDGSLGPSLIVCPASLVYNWGA---EFTKFAPSFNAVVVAGTKAERR---TAIGRAFRAD 992
Query: 272 IPLDGLFNIISYDVVLKLQNILMSS--NFKIVIADESHFLKNAQAKRTAATLPIIKKAQY 329
P I SYD++ + + ++ F ++ DE+ ++KN K A + ++
Sbjct: 993 EPT---VLITSYDLLRRDVDDYTANEQRFNVMALDEAQYIKNHTTKIAKAVKAVAADHRF 1049
Query: 330 ALLLSGTPALSRPIELFKQLEALYPDV---YKNVHE-----YGNRYCKGGVFGIYQGASN 381
AL +GTP +R EL+ + L P + YK HE N G + A+
Sbjct: 1050 AL--TGTPIENRLSELWSIFDFLMPGLLGSYKRFHERYELPISNARAADGSTAEGRAAAQ 1107
Query: 382 --------HEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFR-- 431
+L +L+ + RRLK VL LP K + + +A + R++YA
Sbjct: 1108 VNPEAARVSRQLQSLV-GVFIKRRLKSQVLTDLPDKLETTLTVRLA-GEQRKLYAAHEQR 1165
Query: 432 ---------ELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAE--AKIPAVLDYLE 480
E + KI+ +++ + + L Y D+ + AK+ A+ D +E
Sbjct: 1166 LRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLL----YADAKDQSAKLAAITDLVE 1221
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
T + G K LIF+ LD I + F + + I G TP R LV +F DD A
Sbjct: 1222 TCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVDQFN-ADDTPA 1280
Query: 541 AVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
++S+KAG GL LT AS VI A+ W QA DRAHRIGQ VNVY ++A DT++
Sbjct: 1281 FLISLKAGNTGLNLTGASVVIHADPWWNAAAQDQATDRAHRIGQTEDVNVYQVVAKDTIE 1340
Query: 601 DIVWDVVRSKLENLGQVLDGH--ENSLEVSSSQIRSSPAKQKTL 642
+ + ++ +K E Q D + +S + +PA TL
Sbjct: 1341 ERILELQHTKSELARQFTDASWLADEAGTGASALTEAPASIATL 1384
>gi|402313479|ref|ZP_10832395.1| SNF2 family N-terminal domain protein [Lachnospiraceae bacterium
ICM7]
gi|400366307|gb|EJP19341.1| SNF2 family N-terminal domain protein [Lachnospiraceae bacterium
ICM7]
Length = 1141
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 227/493 (46%), Gaps = 55/493 (11%)
Query: 159 LREKYDQI-------PAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQA 206
L EK+D I P + + L +Q +G ++ L GG +LAD+MGLGKT+Q
Sbjct: 658 LIEKFDNIKSLDFVPPVEVSNVLRKYQNEGFKWLRSVEELGFGG--ILADDMGLGKTLQI 715
Query: 207 IAV---ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTI 263
I++ A + LI+ P+SL +W+ I ++ E+ V + R
Sbjct: 716 ISLLMDAKKNGRLKKALIVCPASLVYNWSEEISKF--DTKGELRVCVLAAAKEER----- 768
Query: 264 VSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATL 321
+++I F+I SYD + + ++ F I DE+ F+KN A
Sbjct: 769 -----QKSIEEHEAFDIYISSYDTLRRDISLYHDMRFSHQIIDEAQFIKNQNTGVAKAVK 823
Query: 322 PIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASN 381
+ +YAL +GTP +R EL+ + + P + + + ++Y V G
Sbjct: 824 TVKADIKYAL--TGTPIENRLSELWSIFDYIMPGFLYSYNSFKSKYENTIV---KDGNDE 878
Query: 382 HEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIK 441
+L + M + ++RRLK +V LP K + + V+ D +Q A EL +K +
Sbjct: 879 SAKLLSKMISPFVLRRLKSEVATDLPDKIEE---VRVSRFDKKQQLAYDTELSKLKNVLN 935
Query: 442 ACKSEEEVQSLKFTEKNLINK----------IYTDSA--EAKIPAVLDYLETVIEAGCKF 489
EE S K + I K I+ D A AK+ +D +++ IEAG K
Sbjct: 936 G---NEEYNSSKMIILSEITKLRQICCDPGLIFEDYAGDSAKLETCIDLVKSGIEAGHKI 992
Query: 490 LIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGG 549
L+F+ MLD I + F ++ + I G T R LV +F DD ++S+KAGG
Sbjct: 993 LLFSQFTSMLDIIKKRFEEENISSYVITGATNKEKRIKLVNDFN-NDDTNVFLISLKAGG 1051
Query: 550 VGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRS 609
GL L A VI + W QA DRAHRIGQ + V VY L+A T+++ + + S
Sbjct: 1052 TGLNLVGADIVIHYDPWWNFAAQNQATDRAHRIGQKNKVTVYRLIAKGTIEEKIVKLQES 1111
Query: 610 KLENLGQVLDGHE 622
K + +VL+ E
Sbjct: 1112 KKDLADRVLNFEE 1124
>gi|282898570|ref|ZP_06306558.1| SNF2-related helicase [Cylindrospermopsis raciborskii CS-505]
gi|281196438|gb|EFA71347.1| SNF2-related helicase [Cylindrospermopsis raciborskii CS-505]
Length = 1427
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 233/493 (47%), Gaps = 44/493 (8%)
Query: 165 QIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
++P+ +++L +Q +G + L H G LAD+MGLGKT+QA+AV T P LI
Sbjct: 939 ELPSTFQAELRDYQMEGFCWLARLAHWGVGACLADQMGLGKTVQALAVITRNAHAGPTLI 998
Query: 222 LTPSSLRLHWAA----------MIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTK-- 269
+ P+S+ ++W +IQ N S+ + L G ++SS K
Sbjct: 999 IAPTSVCMNWVVEANKFAPTLNVIQFGANTRISDRTLSDKDLDGEETP---VISSRQKLL 1055
Query: 270 -RNIPLDGLFNIISYDVVLK--LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKK 326
+ PLD L + SY ++ + + +L ++ ++ DE+ +KN KR+ A + + K
Sbjct: 1056 DQLQPLDML--VCSYGLLQQDDVARMLSQVEWQTIVLDEAQAIKNLNTKRSQAAMGL--K 1111
Query: 327 AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELH 386
+ L+ +GTP + EL+ + P + + + R+ +Q +L
Sbjct: 1112 GNFKLITTGTPIENHLGELWNLFRFINPGLLGSFDSFNQRFSTP--IEKHQDKQARNKLK 1169
Query: 387 NLMKATVMIRRLKKDVLAQLP----------VKRRQQVFLDVAEKDMRQIYALFRELEVV 436
L++ ++RR K VL +LP + R ++VF + RQ + E +
Sbjct: 1170 KLIQP-FLLRRTKSQVLQELPSRTEILLHVELSREEKVFYEALR---RQAISKLNESDAD 1225
Query: 437 KGKIKACKSEEEVQSLKFTEKN-LINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHH 495
GK K + E+ L+ N + TD + +K+ + + L ++E K L+F+
Sbjct: 1226 PGK-KHLQVLAEIMRLRRACCNPSLVMPNTDLSSSKLQLLGEVLAELLENHHKALVFSQF 1284
Query: 496 QPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLT 555
L I K + +DG TP A R+ V FQ D ++S+KAGG GL LT
Sbjct: 1285 VDHLHIIRNYLESKSIKYQYLDGSTPMAERKRSVDSFQAGDG-DIFLISLKAGGTGLNLT 1343
Query: 556 AASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLG 615
AA VI + W P QA DRAHRIGQ V +Y L+A DT++D + ++ K +
Sbjct: 1344 AADYVIHTDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVAKDTIEDKIVELHHHKRDLAD 1403
Query: 616 QVLDGHENSLEVS 628
+L+G + S ++S
Sbjct: 1404 TLLEGTDMSGKIS 1416
>gi|149024737|gb|EDL81234.1| rCG30890, isoform CRA_a [Rattus norvegicus]
Length = 1668
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 137/502 (27%), Positives = 226/502 (45%), Gaps = 72/502 (14%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 411 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 470
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSN---- 267
+ P L+ P S ++W + W P VV + ++ +++ N
Sbjct: 471 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYT----GDKESRSVIRENEFSF 523
Query: 268 -------------TKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQA 314
K+ + + + SY+++ Q IL S + ++ DE+H LKN Q+
Sbjct: 524 EDNAIRGGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQS 583
Query: 315 K--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV 372
K R + K Y LLL+GTP + ELF L L P+ + N+ +
Sbjct: 584 KFFRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------ 633
Query: 373 FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF-- 430
F ++LH+L+ M+RRLK DV +P K V +++++ M++ Y F
Sbjct: 634 FADISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFIL 690
Query: 431 -RELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPA 474
R E + K +K C + + + E ++ N Y S+ K
Sbjct: 691 TRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPMLPNGSYDGSSLVKSSG 750
Query: 475 VLDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVT 530
L L+ ++ + G + LIF+ MLD + + RIDGG RQ +
Sbjct: 751 KLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAID 810
Query: 531 EFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVN 589
F + +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V
Sbjct: 811 RFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVM 870
Query: 590 VYYLLANDTVDDIVWDVVRSKL 611
+Y + +V++ + V + K+
Sbjct: 871 IYRFVTRASVEERITQVAKRKM 892
>gi|28175792|gb|AAH43501.1| Similar to RIKEN cDNA 4432404A22 gene, partial [Homo sapiens]
Length = 890
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 243/506 (48%), Gaps = 57/506 (11%)
Query: 148 RAIASASAAPDLREKYDQIPAHIESKLLPFQRDGV-----RFALQHGGRILLADEMGLGK 202
RA A+ DLR+ + H+ S +Q +GV RF Q+G +L DEMGLGK
Sbjct: 18 RAEAARVQEQDLRQ-WGLTGIHLRS----YQLEGVNWLAQRFHCQNG--CILGDEMGLGK 70
Query: 203 TIQAIAV----ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNR 258
T Q IA+ A D P LIL P S+ +W +Q++ P V
Sbjct: 71 TCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMQRF--APGLSCVTY--------- 119
Query: 259 SGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQA-- 314
+G + ++++ + F+++ +Y++ LK + L S + +++ DE+H LKN +
Sbjct: 120 AGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLL 179
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVY--KNVHEYGNRYCKGGV 372
+T + ++ ++LLL+GTP + EL+ L + PD++ + V ++ RY
Sbjct: 180 HKTLSEFSVV----FSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQD--- 232
Query: 373 FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFR 431
I + + + ELH L++ ++RR+K +V +LP K ++ ++ + A L +
Sbjct: 233 --IEKESESASELHKLLQP-FLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYKAILMK 289
Query: 432 ELEVVKGKI-KACKSEEEVQSLK--FTEKNLINKI---------YTDSAEAKIPAVLDYL 479
+L+ + + K K + + L+ L + + + A K+ + L
Sbjct: 290 DLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLL 349
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
+ G + L+F+ MLD + + R+DG R + F ++ +
Sbjct: 350 AFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IF 408
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGGVG+ LTAA TVIF + + P + +QA RAHRIGQ SV V L+ DTV
Sbjct: 409 VFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTV 468
Query: 600 DDIVWDVVRSKLENLGQVLDGHENSL 625
++IV+ SKL+ +++G +L
Sbjct: 469 EEIVYRKAASKLQLTNMIIEGGHFTL 494
>gi|403420600|ref|NP_001258155.1| chromodomain-helicase-DNA-binding protein 5 [Rattus norvegicus]
Length = 1948
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 137/502 (27%), Positives = 226/502 (45%), Gaps = 72/502 (14%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 683 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 742
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSN---- 267
+ P L+ P S ++W + W P VV + ++ +++ N
Sbjct: 743 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYT----GDKESRSVIRENEFSF 795
Query: 268 -------------TKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQA 314
K+ + + + SY+++ Q IL S + ++ DE+H LKN Q+
Sbjct: 796 EDNAIRGGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQS 855
Query: 315 K--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV 372
K R + K Y LLL+GTP + ELF L L P+ + N+ +
Sbjct: 856 KFFRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------ 905
Query: 373 FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF-- 430
F ++LH+L+ M+RRLK DV +P K V +++++ M++ Y F
Sbjct: 906 FADISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFIL 962
Query: 431 -RELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPA 474
R E + K +K C + + + E ++ N Y S+ K
Sbjct: 963 TRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPMLPNGSYDGSSLVKSSG 1022
Query: 475 VLDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVT 530
L L+ ++ + G + LIF+ MLD + + RIDGG RQ +
Sbjct: 1023 KLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAID 1082
Query: 531 EFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVN 589
F + +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V
Sbjct: 1083 RFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVM 1142
Query: 590 VYYLLANDTVDDIVWDVVRSKL 611
+Y + +V++ + V + K+
Sbjct: 1143 IYRFVTRASVEERITQVAKRKM 1164
>gi|52545633|emb|CAH56377.1| hypothetical protein [Homo sapiens]
Length = 1061
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 60 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 119
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 120 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 176
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 177 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 234
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 235 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 284
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 285 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 341
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 342 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 401
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 402 MLLQKMLKKLRDEGHRLLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 461
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 462 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 521
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 522 RFVTRASVEERITQVAKRKM 541
>gi|432342112|ref|ZP_19591414.1| helicase [Rhodococcus wratislaviensis IFP 2016]
gi|430772867|gb|ELB88593.1| helicase [Rhodococcus wratislaviensis IFP 2016]
Length = 1070
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 220/478 (46%), Gaps = 54/478 (11%)
Query: 167 PAHIESKLLPFQRDGVR---FALQHGGRILLADEMGLGKTIQAIAVATCFRD----VWPV 219
P+ ++++L P+Q +G R F +HG +LAD+MGLGKT+QA+A+ R P
Sbjct: 603 PSTLDAQLRPYQLEGFRWLAFLWEHGLGGILADDMGLGKTLQALALICHARQSNPAAPPF 662
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
LI+ P+S+ +W + + P VV +S + ++R +P D L
Sbjct: 663 LIVAPTSVVSNWES---ESARFAPDATVVAISD-------------TRSRRRVPFDELVE 706
Query: 280 -----IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
+ SY + S + +I DE+ F KN Q+K + + + L ++
Sbjct: 707 GADIVVTSYTLFRLEFEAYAESAWSGLILDEAQFTKNHQSKIYQCVRRL--ETPFKLAVT 764
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT-- 392
GTP + +EL+ L P ++ + + + Y K + + E L L +
Sbjct: 765 GTPMENNLMELWSLLSITAPGLFPHPARFTDYYRKP-----IEKQGDTELLAQLRRRVKP 819
Query: 393 VMIRRLKKDVLAQLPVK-----------RRQQVFLDVAEKDMRQIYALFRELEVVKGKIK 441
+M+RR K+ V+ LP K R ++V+ +++ ++I L +++ K +
Sbjct: 820 LMLRRTKEQVVKDLPAKQEQVLDVELHPRHRKVYDTHLQRERQKILGLLADVD--KNRFT 877
Query: 442 ACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDA 501
+S ++ L + L++ Y D AK+ A+L+ L V+ G + L+F+ L
Sbjct: 878 ILQSLTLLRQLSL-DAGLVDAEYHDVPSAKVDALLEQLADVVAGGHRALVFSQFTGFLGK 936
Query: 502 IHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVI 561
I + +DG T R ++ EF+E ++S+KAGG GL LT A
Sbjct: 937 IRDRLADAGIAHSYLDGST--RRRGDVLREFKEGA-APVFLISLKAGGFGLNLTEADYCF 993
Query: 562 FAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
+ W P QA DRAHRIGQ +V VY L+A DT++D V + K V+D
Sbjct: 994 ILDPWWNPATEAQAVDRAHRIGQTRNVMVYRLIAKDTIEDKVMALKAKKSALFASVMD 1051
>gi|151946631|gb|EDN64853.1| ATPase component of a four subunit chromatin remodeling complex
[Saccharomyces cerevisiae YJM789]
gi|190408605|gb|EDV11870.1| ATPase component of a four subunit chromatin remodeling complex
[Saccharomyces cerevisiae RM11-1a]
Length = 1129
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 234/501 (46%), Gaps = 39/501 (7%)
Query: 162 KYDQIPAHIESKLLPFQRDGVRFALQ-HGGRI--LLADEMGLGKTIQAIAVATCFRDV-- 216
++ + PA++ +L P+Q GV + + H +I +LADEMGLGKT+Q I+ R +
Sbjct: 184 QFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEK 243
Query: 217 --WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P S +W I +W P + L G ++ K+ +
Sbjct: 244 IPGPFLVIAPKSTLNNWLREINRW--TPDVNAFI----LQGDKEERAELIQ---KKLLGC 294
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
D I SY+++++ ++ L N++ +I DE+H +KN ++ + + + LL++
Sbjct: 295 DFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNR--LLIT 352
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVM 394
GTP + EL+ L L PD++ + ++ + + ++LH +++ +
Sbjct: 353 GTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIV--KQLHTVLQP-FL 409
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF-RELEVVKGKIKACKSEEEVQSLK 453
+RR+K DV L K+ +++ ++ + + ++L+ V G + +S+ + ++
Sbjct: 410 LRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIM 469
Query: 454 FTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAHHQP 497
+ N Y D AE P D L+ + E G + LIF+
Sbjct: 470 MQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSR 529
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTA 556
+LD + + RIDG T R + ++ D K +L+ +AGG+G+ LT+
Sbjct: 530 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTS 589
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A V+ + W P +QA DRAHRIGQ V V+ L+ +++V++ + + KL
Sbjct: 590 ADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQL 649
Query: 617 VLDGHENSLEVSSSQIRSSPA 637
V+ + SL+ ++ S A
Sbjct: 650 VIQQNRTSLKKKENKADSKDA 670
>gi|380020464|ref|XP_003694103.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein Mi-2 homolog [Apis florea]
Length = 1964
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 227/501 (45%), Gaps = 64/501 (12%)
Query: 158 DLREKYDQIPAHIES---KLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VA 210
DL++KY++ P +++ +L P+Q +G+ R++ G +LADEMGLGKTIQ I +
Sbjct: 700 DLKKKYERQPEYLDQTGMQLHPYQLEGLNWLRYSWGQGIDTILADEMGLGKTIQTITFLY 759
Query: 211 TCFRD---VWPVLILTPSSLRLHWAAMIQQW---------LNIPPSEIVVVLSQLG---G 255
+ +++ P L+ P S ++W + W + S IV+ ++L G
Sbjct: 760 SLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDKDSRIVIRENELSFEEG 819
Query: 256 SNRSGFT--IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQ 313
+ R G I S+ K N+ L SY+++ L S ++ +++ DE+H LK+ Q
Sbjct: 820 AVRGGRASKIRSNQIKFNVLL------TSYELISIDSACLGSIDWAVLVVDEAHRLKSNQ 873
Query: 314 AK--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGG 371
+K R A+ I Y LLL+GTP + ELF L L D + ++ + N
Sbjct: 874 SKFFRLLASYNIA----YKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLAAFQNE----- 924
Query: 372 VFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI-YALF 430
F ++LH L+ M+RRLK DVL +P K V ++++ + Y L
Sbjct: 925 -FADISKEEQVKKLHELL-GPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILT 982
Query: 431 RELEVVKGK---------------IKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAV 475
R E + K K C + N Y SA K
Sbjct: 983 RNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAASQEAPTAPNGSYETSALIKAAGK 1042
Query: 476 LDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTE 531
L L ++ + G + LIF+ MLD + + RIDG A RQ +
Sbjct: 1043 LVLLSKMLKKLRDDGHRVLIFSQMTKMLDILEDYLEGEGYKYERIDGNITGAQRQEAIDR 1102
Query: 532 FQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNV 590
F + +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ + V +
Sbjct: 1103 FNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMI 1162
Query: 591 YYLLANDTVDDIVWDVVRSKL 611
Y + ++V++ V V + K+
Sbjct: 1163 YRFVTRNSVEERVTQVAKRKM 1183
>gi|358416078|ref|XP_609360.5| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Bos taurus]
Length = 1991
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 722 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 781
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 782 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 838
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 839 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 896
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 897 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 946
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 947 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 1003
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 1004 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1063
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1064 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1123
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1124 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1183
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1184 RFVTRASVEERITQVAKRKM 1203
>gi|256072060|ref|XP_002572355.1| helicase [Schistosoma mansoni]
Length = 1016
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 241/503 (47%), Gaps = 59/503 (11%)
Query: 161 EKYDQIPAHIES-KLLPFQRDGVRFALQ-HGGRI--LLADEMGLGKTIQAIA----VATC 212
++++ P +++ ++ +Q G+ + +Q H I +LADEMGLGKT+Q I+ + C
Sbjct: 96 QRFEASPWYVKGGEMRDYQIRGLNWMIQLHHNNINGILADEMGLGKTLQTISLLGYIKHC 155
Query: 213 FRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNI 272
P +++ P S +W +W+ PS + +S +G + I K+
Sbjct: 156 RHKHGPHMVIVPKSTLSNWMNEFARWV---PS--LRTVSLIGNQDERNQKIQEEILKKEW 210
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
+ + SY++ +K +++L ++ +I DE+H +KN ++K + ++Q LL
Sbjct: 211 DV----IVTSYEMCIKEKSVLKKFHYIYLIIDEAHRIKNEKSKLSEIVRDF--RSQNRLL 264
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE-----LHN 387
++GTP + EL+ L L PD++ + + + +++ ++HEE LH
Sbjct: 265 ITGTPLQNNLHELWALLNFLMPDLFSSSEMFDD---------MFKTDNDHEESLVQRLHA 315
Query: 388 LMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKS 445
++K ++RR+K DV +LP K+ ++++ ++ K R +Y L ++++VV
Sbjct: 316 VLKP-FLLRRIKADVEKRLPPKKECKIYIGLS-KMQRDLYTKILMKDIDVVNSVGNKVDR 373
Query: 446 EEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDY---------------LETVIEAGCKFL 490
+ L K + D E P D+ L + + G + L
Sbjct: 374 LRLLNILMQLRKCCNHPYLFDGLEPGPPFTTDHHLVDNCGKLMLLDKLLPKLKQQGSRVL 433
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGG 549
+F M+D + L + R+DG TP RQ + E+ K +LS +AGG
Sbjct: 434 LFCQMTRMMDILEDYCLWRGHEYFRLDGSTPHEERQISIDEYNRPGSTKFLFMLSTRAGG 493
Query: 550 VGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD--IVWDVV 607
+G+ L A VI + W P +QA DRAHRIGQ +V V+ L+ TV++ I+ +
Sbjct: 494 LGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRLITEHTVEERIIMRAEM 553
Query: 608 RSKLENL----GQVLDGHENSLE 626
+ KL+NL G++++ N L+
Sbjct: 554 KLKLDNLVIQQGRLVEQKSNQLQ 576
>gi|301766462|ref|XP_002918636.1| PREDICTED: probable global transcription activator SNF2L1-like
isoform 1 [Ailuropoda melanoleuca]
Length = 1054
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 234/483 (48%), Gaps = 65/483 (13%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 199 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWV--- 255
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 256 PSLRVICF--VGDKDARAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 306
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 307 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 364
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 365 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 420
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 421 -KMQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 477
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 478 DEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTP 537
Query: 522 PASRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWT 568
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W
Sbjct: 538 HEEREDKFLEVELLGQREAIEAFNVPNSNKFIFMLSTRAGGLGINLASADVVILYDSDWN 597
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHE 622
P +QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D
Sbjct: 598 PQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQS 657
Query: 623 NSL 625
N L
Sbjct: 658 NKL 660
>gi|149745541|ref|XP_001500568.1| PREDICTED: probable global transcription activator SNF2L1 isoform 1
[Equus caballus]
Length = 1057
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 231/481 (48%), Gaps = 61/481 (12%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 202 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 258
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 259 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 311
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 312 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 369
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 370 DFDSWFDTKNCLGDQKLV---ERLHTVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 424
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 425 MQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 482
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 483 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 542
Query: 524 SRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWTPG 570
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W P
Sbjct: 543 EREDKFLEVELLGQREAIEAFNVPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 602
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENS 624
+QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D N
Sbjct: 603 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 662
Query: 625 L 625
L
Sbjct: 663 L 663
>gi|110777198|ref|XP_624414.2| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
[Apis mellifera]
Length = 1966
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 227/501 (45%), Gaps = 64/501 (12%)
Query: 158 DLREKYDQIPAHIES---KLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VA 210
DL++KY++ P +++ +L P+Q +G+ R++ G +LADEMGLGKTIQ I +
Sbjct: 701 DLKKKYERQPEYLDQTGMQLHPYQLEGLNWLRYSWGQGIDTILADEMGLGKTIQTITFLY 760
Query: 211 TCFRD---VWPVLILTPSSLRLHWAAMIQQW---------LNIPPSEIVVVLSQLG---G 255
+ +++ P L+ P S ++W + W + S IV+ ++L G
Sbjct: 761 SLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDKDSRIVIRENELSFEEG 820
Query: 256 SNRSGFT--IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQ 313
+ R G I S+ K N+ L SY+++ L S ++ +++ DE+H LK+ Q
Sbjct: 821 AVRGGRASKIRSNQIKFNVLL------TSYELISIDSACLGSIDWAVLVVDEAHRLKSNQ 874
Query: 314 AK--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGG 371
+K R A+ I Y LLL+GTP + ELF L L D + ++ + N
Sbjct: 875 SKFFRLLASYNIA----YKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLAAFQNE----- 925
Query: 372 VFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI-YALF 430
F ++LH L+ M+RRLK DVL +P K V ++++ + Y L
Sbjct: 926 -FADISKEEQVKKLHELL-GPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILT 983
Query: 431 RELEVVKGK---------------IKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAV 475
R E + K K C + N Y SA K
Sbjct: 984 RNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAASQEAPTAPNGSYETSALIKAAGK 1043
Query: 476 LDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTE 531
L L ++ + G + LIF+ MLD + + RIDG A RQ +
Sbjct: 1044 LVLLSKMLKKLRDDGHRVLIFSQMTKMLDILEDYLEGEGYKYERIDGNITGAQRQEAIDR 1103
Query: 532 FQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNV 590
F + +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ + V +
Sbjct: 1104 FNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMI 1163
Query: 591 YYLLANDTVDDIVWDVVRSKL 611
Y + ++V++ V V + K+
Sbjct: 1164 YRFVTRNSVEERVTQVAKRKM 1184
>gi|7022541|dbj|BAA91637.1| unnamed protein product [Homo sapiens]
Length = 831
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 243/506 (48%), Gaps = 57/506 (11%)
Query: 148 RAIASASAAPDLREKYDQIPAHIESKLLPFQRDGV-----RFALQHGGRILLADEMGLGK 202
RA A+ DLR+ + H+ S +Q +GV RF Q+G +L DEMGLGK
Sbjct: 25 RAEAARVQEQDLRQ-WGLTGIHLRS----YQLEGVNWLAQRFHCQNG--CILGDEMGLGK 77
Query: 203 TIQAIAV----ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNR 258
T Q IA+ A D P LIL P S+ +W +Q++ P V
Sbjct: 78 TCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMQRF--APGLSCVTY--------- 126
Query: 259 SGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQA-- 314
+G + ++++ + F+++ +Y++ LK + L S + +++ DE+H LKN +
Sbjct: 127 AGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLL 186
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVY--KNVHEYGNRYCKGGV 372
+T + ++ ++LLL+GTP + EL+ L + PD++ + V ++ RY
Sbjct: 187 HKTLSEFSVV----FSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQD--- 239
Query: 373 FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFR 431
I + + + ELH L++ ++RR+K +V +LP K ++ ++ + A L +
Sbjct: 240 --IEKESESASELHKLLQP-FLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYKAILMK 296
Query: 432 ELEVVKGKI-KACKSEEEVQSLK--FTEKNLINKI---------YTDSAEAKIPAVLDYL 479
+L+ + + K K + + L+ L + + + A K+ + L
Sbjct: 297 DLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLL 356
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
+ G + L+F+ MLD + + R+DG R + F ++ +
Sbjct: 357 AFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IF 415
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGGVG+ LTAA TVIF + + P + +QA RAHRIGQ SV V L+ DTV
Sbjct: 416 VFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTV 475
Query: 600 DDIVWDVVRSKLENLGQVLDGHENSL 625
++IV+ SKL+ +++G +L
Sbjct: 476 EEIVYRKAASKLQLTNMIIEGGHFTL 501
>gi|353231875|emb|CCD79230.1| putative helicase [Schistosoma mansoni]
Length = 1014
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 241/503 (47%), Gaps = 59/503 (11%)
Query: 161 EKYDQIPAHIES-KLLPFQRDGVRFALQ-HGGRI--LLADEMGLGKTIQAIA----VATC 212
++++ P +++ ++ +Q G+ + +Q H I +LADEMGLGKT+Q I+ + C
Sbjct: 94 QRFEASPWYVKGGEMRDYQIRGLNWMIQLHHNNINGILADEMGLGKTLQTISLLGYIKHC 153
Query: 213 FRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNI 272
P +++ P S +W +W+ PS + +S +G + I K+
Sbjct: 154 RHKHGPHMVIVPKSTLSNWMNEFARWV---PS--LRTVSLIGNQDERNQKIQEEILKKEW 208
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
+ + SY++ +K +++L ++ +I DE+H +KN ++K + ++Q LL
Sbjct: 209 DV----IVTSYEMCIKEKSVLKKFHYIYLIIDEAHRIKNEKSKLSEIVRDF--RSQNRLL 262
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE-----LHN 387
++GTP + EL+ L L PD++ + + + +++ ++HEE LH
Sbjct: 263 ITGTPLQNNLHELWALLNFLMPDLFSSSEMFDD---------MFKTDNDHEESLVQRLHA 313
Query: 388 LMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKS 445
++K ++RR+K DV +LP K+ ++++ ++ K R +Y L ++++VV
Sbjct: 314 VLKP-FLLRRIKADVEKRLPPKKECKIYIGLS-KMQRDLYTKILMKDIDVVNSVGNKVDR 371
Query: 446 EEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDY---------------LETVIEAGCKFL 490
+ L K + D E P D+ L + + G + L
Sbjct: 372 LRLLNILMQLRKCCNHPYLFDGLEPGPPFTTDHHLVDNCGKLMLLDKLLPKLKQQGSRVL 431
Query: 491 IFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGG 549
+F M+D + L + R+DG TP RQ + E+ K +LS +AGG
Sbjct: 432 LFCQMTRMMDILEDYCLWRGHEYFRLDGSTPHEERQISIDEYNRPGSTKFLFMLSTRAGG 491
Query: 550 VGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD--IVWDVV 607
+G+ L A VI + W P +QA DRAHRIGQ +V V+ L+ TV++ I+ +
Sbjct: 492 LGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRLITEHTVEERIIMRAEM 551
Query: 608 RSKLENL----GQVLDGHENSLE 626
+ KL+NL G++++ N L+
Sbjct: 552 KLKLDNLVIQQGRLVEQKSNQLQ 574
>gi|23099744|ref|NP_693210.1| helicase [Oceanobacillus iheyensis HTE831]
gi|22777974|dbj|BAC14245.1| helicase (swi/snf family) [Oceanobacillus iheyensis HTE831]
Length = 1051
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 222/477 (46%), Gaps = 55/477 (11%)
Query: 166 IPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAIAVATCFRD----- 215
IP I S L +Q +GVR+ + GG +LADEMGLGKTIQ+IA
Sbjct: 585 IPKPISSLLKDYQLEGVRWMRAVADMGFGG--VLADEMGLGKTIQSIAYCLSIEKERKDK 642
Query: 216 VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P+LI+ P+S+ W Q+W+ P V+++ + T + + I
Sbjct: 643 KQPILIVCPTSVCYQWK---QEWMTFAPDWSVMIIDGTKAERKQKKTELRNYDVWIISYG 699
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
L N I + LQN F VI DE+ KN A T T+ ++ +++ L+G
Sbjct: 700 MLRNEIDW-----LQN--QVDQFHTVIFDEAQVFKNP-ATHTFRTVKKLR-SEHRFALTG 750
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMI 395
TP ++ +++ ++P++ N+ ++ +N + + + M+
Sbjct: 751 TPLENKIEDIWSIFHVVFPELLGNIKDFS-------------WLTNDQVIRRI--TPFML 795
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYAL---------FRELE---VVKGKIKAC 443
RR KKDV+ +LP K + + E + +Q+Y F+ L+ + K +IK
Sbjct: 796 RREKKDVMQELPTKVEYVERISLTE-EQKQLYVSYLAKLRHPSFKHLDKETIRKNRIKIL 854
Query: 444 KSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
++ + +L + Y D + AK+ + ++ A + LIF+ ML I
Sbjct: 855 AGITRLRQI-CCHPSLFVRKYNDKS-AKLERLKQLIKDASRANKRLLIFSQFTSMLQLIG 912
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
+ K + IDG TP R + F + + + ++S+KAGG GL L A TVI
Sbjct: 913 KELRNKDILYYYIDGETPAEERVEICRAFNQGNR-EVCLISLKAGGTGLNLVGADTVILY 971
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
++ W P QA DRAHRIGQ S V V LL+ T+++ ++++ R K E + +++G
Sbjct: 972 DVWWNPAVEEQAIDRAHRIGQQSEVTVIRLLSEGTIEEKMYELQRKKRELMNYLVNG 1028
>gi|281346162|gb|EFB21746.1| hypothetical protein PANDA_013140 [Ailuropoda melanoleuca]
Length = 1814
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 222/498 (44%), Gaps = 67/498 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 555 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 614
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 615 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 671
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKR 316
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q K
Sbjct: 672 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQPKV 729
Query: 317 TAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIY 376
+ K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 730 LNSY-----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FADI 778
Query: 377 QGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---REL 433
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 779 SKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTRNF 835
Query: 434 EVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVLDY 478
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 836 EALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLML 895
Query: 479 LETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE 534
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 896 LQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNA 955
Query: 535 KDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYL 593
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 956 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1015
Query: 594 LANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1016 VTRASVEERITQVAKRKM 1033
>gi|223940436|ref|ZP_03632288.1| Non-specific serine/threonine protein kinase [bacterium Ellin514]
gi|223890881|gb|EEF57390.1| Non-specific serine/threonine protein kinase [bacterium Ellin514]
Length = 1099
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 230/485 (47%), Gaps = 51/485 (10%)
Query: 166 IPAHIESKLLPFQRDGVRFALQHGGRI----LLADEMGLGKTIQAIAVATCFRD-----V 216
+P +++ L P+Q++G F L H +I +LAD+MGLGKT+Q + R+
Sbjct: 629 VPDSVKADLRPYQKEGFDF-LCHLTQIKLGGILADDMGLGKTLQTLTWIAWLRERNSKNP 687
Query: 217 WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDG 276
P L++ P+S+ +W ++ P V+VL G+ R N ++ IP
Sbjct: 688 KPSLVICPASVLHNWRREAER---FTPHLKVLVLE--SGAARH-------NLRKQIPQHD 735
Query: 277 LFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
L + +Y ++ + L F VI DE+ F+KN A+ T + + + + L L+GT
Sbjct: 736 LI-VTNYALLRRDLEALQKFAFGAVILDEAQFIKNPTAQVTQSVKQL--RGDHTLALTGT 792
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT---- 392
P +R ++L+ ++ + P N + Y G + A N + + +
Sbjct: 793 PLENRLLDLWSIVDFVQPGYLGNQEHFAQTYEPRG-----EDAENAQRIARRRLSAKLRP 847
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL 452
+M+RRLK V LP + Q+ + + D R++Y EL + ++ +E+ +
Sbjct: 848 LMLRRLKHRVAKDLPERIEQRRDCQLGD-DQRKLY--LAELRRSREQVFQTVAEKGLSQS 904
Query: 453 KFTEKNLINKIY----------TDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAI 502
K + ++ D+ K + + L+ ++ G K L+F+ +L +
Sbjct: 905 KIHVLAALTRLRQICCHPQLVGNDAQSGKTETLFELLDPLLTDGQKVLVFSQFVQVLKIL 964
Query: 503 HQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIF 562
++++ + G T RQ +V FQ + +LS++A G GL LT AS V+
Sbjct: 965 EAECQQRQIRTHLLTGQT--KQRQEVVAAFQSDPNAAVFLLSLRAAGTGLNLTNASYVVL 1022
Query: 563 AELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL--DG 620
+ W P QA DR+HRIGQV++VN Y L+A TV++ +W++ +SK + + VL +G
Sbjct: 1023 YDPWWNPAVEAQAIDRSHRIGQVNTVNAYRLIAPGTVEEKIWELQQSKAQTIADVLGEEG 1082
Query: 621 HENSL 625
SL
Sbjct: 1083 FARSL 1087
>gi|440908595|gb|ELR58598.1| Chromodomain-helicase-DNA-binding protein 5, partial [Bos grunniens
mutus]
Length = 1920
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 660 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 719
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 720 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 776
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 777 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 834
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 835 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 884
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 885 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 941
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 942 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1001
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1002 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1061
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1062 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1121
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1122 RFVTRASVEERITQVAKRKM 1141
>gi|114558326|ref|XP_001158033.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform
8 [Pan troglodytes]
gi|410295560|gb|JAA26380.1| chromodomain helicase DNA binding protein 1-like [Pan troglodytes]
gi|410350041|gb|JAA41624.1| chromodomain helicase DNA binding protein 1-like [Pan troglodytes]
Length = 896
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 140/506 (27%), Positives = 241/506 (47%), Gaps = 57/506 (11%)
Query: 148 RAIASASAAPDLREKYDQIPAHIESKLLPFQRDGV-----RFALQHGGRILLADEMGLGK 202
RA A+ DLR+ + H+ S +Q +GV RF Q+G +L DEMGLGK
Sbjct: 25 RAEAARVQEQDLRQ-WGLTGIHLRS----YQLEGVNWLAQRFHCQNG--CILGDEMGLGK 77
Query: 203 TIQAIAV----ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNR 258
T Q IA+ A D P LIL P S+ +W +Q++ P V
Sbjct: 78 TCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMQRF--APGLSCVTY--------- 126
Query: 259 SGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQA-- 314
+G + ++++ + F+++ +Y++ LK + L S + +++ DE+H LKN +
Sbjct: 127 AGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLL 186
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVY--KNVHEYGNRYCKGGV 372
+T + ++ ++LLL+GTP + EL+ L + PD++ + V ++ RY
Sbjct: 187 HKTLSEFSVV----FSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQD--- 239
Query: 373 FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFR 431
I + + ELH L++ ++RR+K +V +LP K ++ ++ R A L +
Sbjct: 240 --IEKEPESASELHKLLQP-FLLRRVKAEVATELPKKTEVVIYHGMSALQKRYYKAILMK 296
Query: 432 ELEVVKGKI-KACKSEEEVQSLK--FTEKNLINKIYTD---------SAEAKIPAVLDYL 479
+L+ + + K K + + L+ L + + + A K+ + L
Sbjct: 297 DLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASGKLHLLDKLL 356
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
+ G + L+F+ MLD + + R+DG R + F + +
Sbjct: 357 AFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFG-RQPIF 415
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGGVG+ LTAA TVIF + + P + +QA RAHRIGQ SV V L+ DTV
Sbjct: 416 VFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTV 475
Query: 600 DDIVWDVVRSKLENLGQVLDGHENSL 625
++IV+ SKL+ +++G +L
Sbjct: 476 EEIVYRKAASKLQLTNMIIEGGHFTL 501
>gi|24308089|ref|NP_056372.1| chromodomain-helicase-DNA-binding protein 5 [Homo sapiens]
gi|51701343|sp|Q8TDI0.1|CHD5_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 5;
Short=CHD-5; AltName: Full=ATP-dependent helicase CHD5
gi|19773960|gb|AAL98962.1|AF425231_1 chromodomain helicase DNA binding protein 5 [Homo sapiens]
gi|119591922|gb|EAW71516.1| chromodomain helicase DNA binding protein 5 [Homo sapiens]
gi|148922387|gb|AAI46382.1| Chromodomain helicase DNA binding protein 5 [synthetic construct]
gi|151555557|gb|AAI48804.1| Chromodomain helicase DNA binding protein 5 [synthetic construct]
gi|261857536|dbj|BAI45290.1| Chromodomain-helicase-DNA-binding protein 5 [synthetic construct]
Length = 1954
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 685 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 744
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 745 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 801
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 802 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 859
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 860 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 909
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 910 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 966
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 967 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1026
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1027 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1086
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1087 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1146
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1147 RFVTRASVEERITQVAKRKM 1166
>gi|229828003|ref|ZP_04454072.1| hypothetical protein GCWU000342_00052 [Shuttleworthia satelles DSM
14600]
gi|229792597|gb|EEP28711.1| hypothetical protein GCWU000342_00052 [Shuttleworthia satelles DSM
14600]
Length = 1314
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 137/488 (28%), Positives = 229/488 (46%), Gaps = 52/488 (10%)
Query: 165 QIPAHIESKLLPFQRDGVRF----ALQHGGRILLADEMGLGKTIQAIAVATCFRDV---- 216
++P + L +Q G ++ A H G IL AD+MGLGKT+Q IAV ++
Sbjct: 839 EVPRGLSKVLRKYQTYGYKWIRTLAANHFGGIL-ADDMGLGKTLQMIAVLAAEKESPNRA 897
Query: 217 ------WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKR 270
P L++ P+SL +W +++ P VV ++ G R ++ +
Sbjct: 898 KDLSAGGPSLVICPASLVYNWQ---EEFTRFAPELAVVPVTGFAGQRRK---LLDDCRQA 951
Query: 271 NIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA 330
++ I SYD++ + ++ F + DE+ ++KN QA + A I K+++
Sbjct: 952 DVL------ITSYDLLKRDISLYEKIEFDFQVLDEAQYIKNPQAAVSKAVKII--KSRHR 1003
Query: 331 LLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK 390
L+GTP +R EL+ + L P + ++ + I + + E + L +
Sbjct: 1004 FALTGTPIENRLSELWSIFDFLMPGFLYSYEDFRTDF----ELPIAR-EEDQEVIARLRR 1058
Query: 391 AT--VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKIKACKSE 446
T ++RRLK+DVL LP K ++V E + R++Y + R ++ G +A +
Sbjct: 1059 MTGPFILRRLKRDVLKDLPAKI-EEVRYARLEGEQRRLYDAQVARMRAMIAGAGEAY-NR 1116
Query: 447 EEVQSLKFTEKNLINKIYTDSA---------EAKIPAVLDYLETVIEAGCKFLIFAHHQP 497
++Q L E I +I D + AK A LD + + I+ G K L+F+
Sbjct: 1117 NKIQVL--AELTKIRQICCDPSIFVEGYRGKSAKRKACLDLIGSAIDGGHKMLVFSQFTS 1174
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
ML + + + K+ +I G T R LV F + D+ ++S+KAGG GL LT A
Sbjct: 1175 MLALLEEDLSRAKIPFYKITGATGKEERLRLVHAFND-DETPVFLISLKAGGTGLNLTGA 1233
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
VI + W QA DRAHRIGQ V+V+ L+A T++D + ++ K + +
Sbjct: 1234 DLVIHYDPWWNLAAQNQATDRAHRIGQTKDVSVFRLIAKGTIEDRILEMQEKKKDLADAI 1293
Query: 618 LDGHENSL 625
L G SL
Sbjct: 1294 LSGQSESL 1301
>gi|294806211|ref|ZP_06765058.1| SNF2 family N-terminal domain protein [Bacteroides xylanisolvens SD
CC 1b]
gi|294446467|gb|EFG15087.1| SNF2 family N-terminal domain protein [Bacteroides xylanisolvens SD
CC 1b]
Length = 827
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 234/511 (45%), Gaps = 70/511 (13%)
Query: 158 DLREKYDQIPAH---------IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIA 208
DLR + +P + +++KL P+Q++G+RFA + G+ ++ADEMGLGKTIQAI
Sbjct: 198 DLRRRSQLLPDYASDTALDTLLKTKLYPYQKEGIRFAFR-AGKSIIADEMGLGKTIQAIG 256
Query: 209 VATCFRD---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVS 265
A R + LI+ P+SL+ W I+++ + IVV + L G
Sbjct: 257 TAELMRKHQFISSALIICPTSLKYQWKKEIERFTD--AKAIVVEGNHLTRKVLYG----- 309
Query: 266 SNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK 325
+ + I+SY+ V IL S + +I DE LKN + + A I
Sbjct: 310 --------AEEFYKIVSYNSVCNDIKILKSLHTDFLIMDEVQRLKNWNTQISKAARHI-- 359
Query: 326 KAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVF------------ 373
++ Y+++LSGTP L +LE LY ++ ++ +++C G +
Sbjct: 360 ESDYSVILSGTP-------LENKLEELY-----SIMQFVDQFCLGPYYQFLDQTVVRSDT 407
Query: 374 GIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAE--KDMRQIYALFR 431
G N + MK V+IRR KKDV QLP + + +F+ + E ++M Y
Sbjct: 408 GKVVSYKNLNAIGEQMK-NVLIRRRKKDVALQLPGRMDKVLFVPMTEQQRNMHDEYQSIV 466
Query: 432 ELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSA---------EAKIPAVLDYLETV 482
V K SE++ + L + ++ DS + K+ L+ L V
Sbjct: 467 SQLVFKWTKTRFLSEKDRKRLLLMLSQM--RMLCDSTYILDQKTRYDTKVEETLNILRNV 524
Query: 483 IEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
E+G K +IF+ + M I + V + GG P +R+ L F E + +
Sbjct: 525 FESGDEKVVIFSQWERMTRLIAKELDVLGVRYEYLHGGIPSEARKNLTDNFTELPESRV- 583
Query: 542 VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 601
LS AG GL L AS +I +L W P L Q R +RIGQ ++ V L+A+ T+++
Sbjct: 584 FLSTDAGSTGLNLQVASILINLDLPWNPAVLEQRIARIYRIGQKKNIQVINLVASQTIEE 643
Query: 602 IVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
+ + K +LD E+++ + +S+
Sbjct: 644 RMLSTLNFKTSLFEGILDNGEDTIFLENSKF 674
>gi|294647817|ref|ZP_06725369.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CC 2a]
gi|423214375|ref|ZP_17200903.1| hypothetical protein HMPREF1074_02435 [Bacteroides xylanisolvens
CL03T12C04]
gi|292636725|gb|EFF55191.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CC 2a]
gi|392692790|gb|EIY86026.1| hypothetical protein HMPREF1074_02435 [Bacteroides xylanisolvens
CL03T12C04]
Length = 829
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 234/511 (45%), Gaps = 70/511 (13%)
Query: 158 DLREKYDQIPAH---------IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIA 208
DLR + +P + +++KL P+Q++G+RFA + G+ ++ADEMGLGKTIQAI
Sbjct: 200 DLRRRSQLLPDYASDTALDTLLKTKLYPYQKEGIRFAFR-AGKSIIADEMGLGKTIQAIG 258
Query: 209 VATCFRD---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVS 265
A R + LI+ P+SL+ W I+++ + IVV + L G
Sbjct: 259 TAELMRKHQFISSALIICPTSLKYQWKKEIERFTD--AKAIVVEGNHLTRKVLYG----- 311
Query: 266 SNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK 325
+ + I+SY+ V IL S + +I DE LKN + + A I
Sbjct: 312 --------AEEFYKIVSYNSVCNDIKILKSLHTDFLIMDEVQRLKNWNTQISKAARHI-- 361
Query: 326 KAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVF------------ 373
++ Y+++LSGTP L +LE LY ++ ++ +++C G +
Sbjct: 362 ESDYSVILSGTP-------LENKLEELY-----SIMQFVDQFCLGPYYQFLDQTVVRSDT 409
Query: 374 GIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAE--KDMRQIYALFR 431
G N + MK V+IRR KKDV QLP + + +F+ + E ++M Y
Sbjct: 410 GKVVSYKNLNAIGEQMK-NVLIRRRKKDVALQLPGRMDKVLFVPMTEQQRNMHDEYQSIV 468
Query: 432 ELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSA---------EAKIPAVLDYLETV 482
V K SE++ + L + ++ DS + K+ L+ L V
Sbjct: 469 SQLVFKWTKTRFLSEKDRKRLLLMLSQM--RMLCDSTYILDQKTRYDTKVEETLNILRNV 526
Query: 483 IEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
E+G K +IF+ + M I + V + GG P +R+ L F E + +
Sbjct: 527 FESGDEKVVIFSQWERMTRLIAKELDVLGVRYEYLHGGIPSEARKNLTDNFTELPESRV- 585
Query: 542 VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 601
LS AG GL L AS +I +L W P L Q R +RIGQ ++ V L+A+ T+++
Sbjct: 586 FLSTDAGSTGLNLQVASILINLDLPWNPAVLEQRIARIYRIGQKKNIQVINLVASQTIEE 645
Query: 602 IVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
+ + K +LD E+++ + +S+
Sbjct: 646 RMLSTLNFKTSLFEGILDNGEDTIFLENSKF 676
>gi|393213074|gb|EJC98571.1| hypothetical protein FOMMEDRAFT_95786 [Fomitiporia mediterranea
MF3/22]
Length = 1071
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 224/478 (46%), Gaps = 44/478 (9%)
Query: 163 YDQIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAI---AVATCFRDV 216
+++ P I + P+Q G+ + +L H G +LADEMGLGKT+Q I A +RD+
Sbjct: 167 FEESPQFISGTMRPYQVQGLNWMVSLHHNGLNGILADEMGLGKTLQTISFLAYLKHYRDI 226
Query: 217 W-PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P LI+ P S +WA +W P + +LS G+ ++ + R IP+D
Sbjct: 227 GGPHLIVVPKSTLQNWAREFAKWT---PDFNIALLS---GTKEERQDVIQN---RLIPMD 277
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
I +Y++ L ++ L +F ++ DE+H +KN + + + + LL++G
Sbjct: 278 FEVCITTYEICLIEKSALKKMSFAQIVIDEAHRIKNIDSILSQIVRAFTSRGR--LLITG 335
Query: 336 TPALSRPIELFKQLEALYPDV---YKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
TP + ELF L + P++ Y ++ + ++ G E LH +++
Sbjct: 336 TPLQNNMKELFALLNFICPEIFSDYADLESFLHKDDSGETDDQETSKKVVEALHKILRP- 394
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKIKACKSEEEVQ 450
++RR+K DV L K+ +++ + E R+ Y L ++++ V G K E + +
Sbjct: 395 FLLRRVKSDVEKNLLPKKEINIYVGLTEM-QRKWYKSVLSKDIDAVNGL--TGKKEGKTR 451
Query: 451 SLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAH 494
+ + + Y D AE P D L+++ E G + LIF+
Sbjct: 452 LMNIVMQVVCCHPYLFDGAEPGPPYTTDEHLIDNAGKMVILDKLLKSMKEKGSRVLIFSQ 511
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLT 553
+LD + + + RIDGGT R + E+ + K +L+ +AGG+G+
Sbjct: 512 MSRVLDILEDYSIFRGYKYCRIDGGTAHEDRITAIDEYNKPGSEKFLFLLTTRAGGLGIN 571
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
LT A V+ + W P +QA DRAHRIGQ V V+ + ++V++ + + KL
Sbjct: 572 LTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITENSVEERMLERAAQKL 629
>gi|322391674|ref|ZP_08065142.1| Snf2 family protein [Streptococcus peroris ATCC 700780]
gi|321145485|gb|EFX40878.1| Snf2 family protein [Streptococcus peroris ATCC 700780]
Length = 1032
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 229/490 (46%), Gaps = 54/490 (11%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIA-VATCFR 214
E + P I ++L +Q+ G+++ L H GG +LAD+MGLGKT+QAI +++ +
Sbjct: 570 EDFPMKPLDIRAQLRDYQKKGIQWLQMLHHYGFGG--ILADDMGLGKTLQAITFLSSQLQ 627
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
+ VLIL PS L +W Q++ P+ V V+ L + I++ +
Sbjct: 628 ENSRVLILAPSGLIYNWTDEFQKF---APNLDVAVVHGLKPYREA---ILAEKHQ----- 676
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
+ SY + I +F + DE+ +KNAQ K + + +AL S
Sbjct: 677 ---IYVTSYATFRQDSEIYRDLSFDFLFLDEAQVMKNAQTKIAKILRKFVVPSVFAL--S 731
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVM 394
GTP + EL+ + + P+ ++ E + +K VM
Sbjct: 732 GTPIENNLGELWSIFQIVIPEFLPAKKDFMKLPA--------------ERVAQFIKPFVM 777
Query: 395 IRRLKKDVLAQLP----------VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACK 444
RR KKDVL +LP ++ +Q+ + M++ ELE + +++
Sbjct: 778 -RRKKKDVLTELPDLIEVVYKNELEDQQKTIYLAQLQQMQEHLGKVTELEFQRNRVEILT 836
Query: 445 SEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
++ + T +N DS K+ ++ D L + EA + LIF+ + MLD I Q
Sbjct: 837 GLMRLRQICDTPALFMNDYQGDSG--KLDSLRDLLNQIGEANHRVLIFSQFRGMLDRIEQ 894
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEF-QEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
+ +I G TP RQ + F Q + DV ++S+KAGGVGL LT A TVI
Sbjct: 895 ELPHIGLTSFKITGSTPSQERQEMTKAFNQGERDV--FLISLKAGGVGLNLTGADTVILV 952
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
+L W P QA RAHR+GQ +V VY L+ T+++ + ++ K + +VLDG E+
Sbjct: 953 DLWWNPAVESQAISRAHRMGQEQAVEVYRLVTRGTIEEKIQELQEQKKNLVSEVLDGTES 1012
Query: 624 SLEVSSSQIR 633
++ ++I+
Sbjct: 1013 RGSLTLAEIQ 1022
>gi|170755011|ref|YP_001781230.1| SNF2 family helicase [Clostridium botulinum B1 str. Okra]
gi|429244168|ref|ZP_19207646.1| SNF2 family helicase [Clostridium botulinum CFSAN001628]
gi|169120223|gb|ACA44059.1| helicase, Snf2 family [Clostridium botulinum B1 str. Okra]
gi|428758786|gb|EKX81182.1| SNF2 family helicase [Clostridium botulinum CFSAN001628]
Length = 1097
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 245/506 (48%), Gaps = 48/506 (9%)
Query: 153 ASAAPDLREKYDQIPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAI 207
+S ++ + + ++P + + L +Q G R+ ++ GG +LADEMGLGKTIQ I
Sbjct: 626 SSRITNINDDHYEVPKKLNATLREYQIAGYRWMKILSNMKFGG--ILADEMGLGKTIQTI 683
Query: 208 AVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSN 267
+ + + LI+TP+SL +W Q++ + + + GS ++
Sbjct: 684 SFLLSEKGI-KSLIVTPTSLIYNWQDEFQKFAE------TLKIGVIHGSKEERMKVLDDR 736
Query: 268 TKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKA 327
K ++ L +Y + + F I DE +KN A+ T + I K
Sbjct: 737 EKYDVLL------TTYGTLKNDIQLYKDITFDYCIIDEGQNIKNPLAQSTDSVKRINSKV 790
Query: 328 QYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHN 387
++AL +GTP + +EL+ + + P + + ++ I + +N ++L
Sbjct: 791 RFAL--TGTPIENNLMELWSIFDFIMPGYLYSEERFQEKF-------IDKVEANIDKLKT 841
Query: 388 LMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE 447
L++ ++ RR KKDVL LP K ++ +++ R IY + ++ +K K+K K ++
Sbjct: 842 LIRPFIL-RREKKDVLKDLPHKIEKKFLVEMTTNQER-IYKAY--MKSIKEKLKNNKEDK 897
Query: 448 --------EVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
++ L +I++ S++ +I ++ ++ ++ G K L+F+ +L
Sbjct: 898 ITIFSYLTRLRQLCLDPSIIIDEYKGGSSKLRIA--MELVQEGVDEGKKILLFSQFTSVL 955
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
I +L K+ + +DG T + R LV +F + VK ++S+KAGG GL LT+A+
Sbjct: 956 KNISRLLKKECIEYFYLDGSTNASERIKLVDKFNKNSHVKVFLISLKAGGTGLNLTSANL 1015
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
VI + W P QA DRAHRIGQ + V V L+ T+++ + + K E + V++
Sbjct: 1016 VIHFDPWWNPAVEDQATDRAHRIGQKNLVQVIKLVCKGTIEEKIIMLQEDKKELINNVMN 1075
Query: 620 GHENSLEVSSSQIRSSPAKQKTLDSF 645
++ S + ++ +K++ LD F
Sbjct: 1076 S-----DLKSGNLINTLSKEEILDLF 1096
>gi|402852748|ref|XP_003891075.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 isoform 2
[Papio anubis]
Length = 1951
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 685 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 744
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 745 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 801
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 802 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 859
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 860 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 909
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 910 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 966
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 967 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1026
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1027 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1086
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1087 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1146
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1147 RFVTRASVEERITQVAKRKM 1166
>gi|401427882|ref|XP_003878424.1| putative DNA-dependent ATPase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494672|emb|CBZ29974.1| putative DNA-dependent ATPase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1098
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 218/490 (44%), Gaps = 73/490 (14%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRDVW---- 217
+ P++I KL P+Q +GV + L G +LADEMGLGKT Q IA +
Sbjct: 157 ETPSYIRGKLRPYQIEGVNWLLSLFSRGVNGILADEMGLGKTFQTIATIAYLKFTLGMPG 216
Query: 218 PVLILTPSSLRLHWAAMIQQWL------------NIPPSEIVVVLSQLGGSNRSGFTIVS 265
P L++ P S+ +W + W +I PS +V + L ++R + ++
Sbjct: 217 PHLVVCPKSVMGNWYREFKHWCPGLLVYKFHASSDIRPS---IVKAHLHPTDRIKYDVI- 272
Query: 266 SNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK 325
+ ++++VL N+ ++ +I DE+H LKN + + A +
Sbjct: 273 --------------VTTFEMVLDELNLFKRIAWQYLIVDEAHKLKNEEGRAHTALDSL-- 316
Query: 326 KAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEEL 385
+ L+++GTP + EL+ L L P ++ + + F G + +
Sbjct: 317 HTSHRLIITGTPLQNNLKELWALLHFLAPRLFSDSESFDT------WFDTASGQQDANVM 370
Query: 386 HNLMK--ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY--ALFRELEVVKGKIK 441
NL K A +MIRRLK DV +P K+ V +++K R+ Y L ++ EV+ K
Sbjct: 371 SNLHKILAPLMIRRLKADVSTGIPPKKEIYVSCQLSKKQ-REWYMNVLAKDAEVLN---K 426
Query: 442 ACKSEEEVQSLKFTEKNLINKIY-TDSAEAKIPAVLD------------------YLETV 482
A S + + + + +IN Y D E P V D L
Sbjct: 427 AGGSVASLTNAMMSLRKVINHPYLMDGGEEGPPFVTDEKLVRTSGKMIILDKLLHRLRAD 486
Query: 483 IEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAA 541
++ K LIF+ ML+ + + RIDG T R + + F D
Sbjct: 487 VQGKHKVLIFSQFTSMLNILEDYCNMRGFMYCRIDGNTSGYDRDSQMASFNSPSSDYFIF 546
Query: 542 VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 601
+LS +AGG+G+ L AA+ VI + W P +QA+DRAHRIGQ SV VY + + T+++
Sbjct: 547 LLSTRAGGLGINLQAANHVILYDSDWNPQMDLQAQDRAHRIGQKRSVRVYRFVTDGTLEE 606
Query: 602 IVWDVVRSKL 611
++ KL
Sbjct: 607 KMYRRALKKL 616
>gi|345510367|ref|ZP_08789935.1| helicase [Bacteroides sp. D1]
gi|345454543|gb|EEO48862.2| helicase [Bacteroides sp. D1]
Length = 851
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 234/511 (45%), Gaps = 70/511 (13%)
Query: 158 DLREKYDQIPAH---------IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIA 208
DLR + +P + +++KL P+Q++G+RFA + G+ ++ADEMGLGKTIQAI
Sbjct: 222 DLRRRSQLLPDYASDTALDTLLKTKLYPYQKEGIRFAFR-AGKSIIADEMGLGKTIQAIG 280
Query: 209 VATCFRD---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVS 265
A R + LI+ P+SL+ W I+++ + IVV + L G
Sbjct: 281 TAELMRKHQFISSALIICPTSLKYQWKKEIERFTD--AKAIVVEGNHLTRKVLYG----- 333
Query: 266 SNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK 325
+ + I+SY+ V IL S + +I DE LKN + + A I
Sbjct: 334 --------AEEFYKIVSYNSVCNDIKILKSLHTDFLIMDEVQRLKNWNTQISKAARHI-- 383
Query: 326 KAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVF------------ 373
++ Y+++LSGTP L +LE LY ++ ++ +++C G +
Sbjct: 384 ESDYSVILSGTP-------LENKLEELY-----SIMQFVDQFCLGPYYQFLDQTVVRSDT 431
Query: 374 GIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAE--KDMRQIYALFR 431
G N + MK V+IRR KKDV QLP + + +F+ + E ++M Y
Sbjct: 432 GKVVSYKNLNAIGEQMK-NVLIRRRKKDVALQLPGRMDKVLFVPMTEQQRNMHDEYQSIV 490
Query: 432 ELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSA---------EAKIPAVLDYLETV 482
V K SE++ + L + ++ DS + K+ L+ L V
Sbjct: 491 SQLVFKWTKTRFLSEKDRKRLLLMLSQM--RMLCDSTYILDQKTRYDTKVEETLNILRNV 548
Query: 483 IEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
E+G K +IF+ + M I + V + GG P +R+ L F E + +
Sbjct: 549 FESGDEKVVIFSQWERMTRLIAKELDVLGVRYEYLHGGIPSEARKNLTDNFTELPESRV- 607
Query: 542 VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 601
LS AG GL L AS +I +L W P L Q R +RIGQ ++ V L+A+ T+++
Sbjct: 608 FLSTDAGSTGLNLQVASILINLDLPWNPAVLEQRIARIYRIGQKKNIQVINLVASQTIEE 667
Query: 602 IVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
+ + K +LD E+++ + +S+
Sbjct: 668 RMLSTLNFKTSLFEGILDNGEDTIFLENSKF 698
>gi|440714115|ref|ZP_20894701.1| SNF2 family helicase [Rhodopirellula baltica SWK14]
gi|436441104|gb|ELP34379.1| SNF2 family helicase [Rhodopirellula baltica SWK14]
Length = 914
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 240/499 (48%), Gaps = 69/499 (13%)
Query: 131 EISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHI----------ESKLLPFQRD 180
E +G++V+I +P + + +R + DQI + I ++LLP+Q D
Sbjct: 296 ETAGHDVKI---YPDAEAFLQRELMQKHIRRECDQIRSSISDHPLRTKLLNAELLPYQLD 352
Query: 181 GVRFALQHGGRILLADEMGLGKTIQAIAVATCF---RDVWPVLILTPSSLRLHWAAMIQQ 237
G+ FA GR +LAD+MGLGKTIQ I VA D+ VL++ P+SL+ W I +
Sbjct: 353 GIAFA-AGAGRAILADDMGLGKTIQGIGVAELLAKLSDISRVLVVCPASLKSQWRDEIAR 411
Query: 238 WLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKR--NIPLDGLFNIISYDVVLKLQNILMS 295
+ S RS ++ +R D F I +Y+ VL+ + +
Sbjct: 412 F-----------------SGRSSQIVLGKGEERIEQYESDTFFTICNYEQVLRDLTAVEN 454
Query: 296 SNFKIVIADESHFLKNAQAKRTAATLPIIKKAQ--YALLLSGTPALSRPIELFKQLEALY 353
++ ++I DE +KN ++K T +I++ + + L+LSGTP +R ELF +
Sbjct: 455 VSWDLIILDEGQRIKNWESK----TSNVIRQLESPFRLVLSGTPLENRLGELFTVTRFID 510
Query: 354 PDV----YKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVK 409
D+ Y+ H++ +G G Q E++ V++RR + +V QLP
Sbjct: 511 DDLLGPAYQFFHQHHVVDDRGKTLGYRQLDVLREKMR-----PVLLRRTRAEVAKQLP-D 564
Query: 410 RRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSA- 468
R ++ A + ++++ ++VV +I A K E+ L+ + L+ ++ DS
Sbjct: 565 RTDEIIRCEATAEQKEVHDA--NMKVV-AQIAAKKFMTEMDRLRMQKCLLMARMACDSTY 621
Query: 469 ---------EAKIPAVLDYLETVI-EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDG 518
+K+ + + LE +I + K ++F+ + ML + + +R+DG
Sbjct: 622 LLDQEADEYSSKLERLGELLEGLIADPTRKIVLFSEWRRMLTRVENRLDQIGCDYVRLDG 681
Query: 519 GTPPASRQALVTEFQEKDDVKAAVLSM-KAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
P R A+V+ FQ +D + +++M AG GL L AA+TVI +L W P L Q
Sbjct: 682 QVPQKKRAAIVSRFQ--NDPECRLINMTNAGSTGLNLQAANTVINVDLPWNPAVLEQRIA 739
Query: 578 RAHRIGQVSSVNVYYLLAN 596
RA+R+GQ + V+VY L+
Sbjct: 740 RAYRMGQENPVHVYKLVTT 758
>gi|355720681|gb|AES07011.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Mustela putorius furo]
Length = 1032
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 234/483 (48%), Gaps = 65/483 (13%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 185 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWV--- 241
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 242 PSLRVICF--VGDKDVRAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 292
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 293 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 350
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 351 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 406
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 407 -KMQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 463
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 464 DEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTP 523
Query: 522 PASRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWT 568
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W
Sbjct: 524 HEEREDKFLEVELLGQREAIEAFNVPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWN 583
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHE 622
P +QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D
Sbjct: 584 PQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQS 643
Query: 623 NSL 625
N L
Sbjct: 644 NKL 646
>gi|380815784|gb|AFE79766.1| putative global transcription activator SNF2L1 isoform a [Macaca
mulatta]
gi|384948908|gb|AFI38059.1| putative global transcription activator SNF2L1 isoform a [Macaca
mulatta]
gi|410340059|gb|JAA38976.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1048
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 231/481 (48%), Gaps = 61/481 (12%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 199 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 255
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 256 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 308
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 309 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 366
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 367 DFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 421
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 422 MQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 479
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 480 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 539
Query: 524 SRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWTPG 570
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W P
Sbjct: 540 EREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 599
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENS 624
+QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D N
Sbjct: 600 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 659
Query: 625 L 625
L
Sbjct: 660 L 660
>gi|68471523|ref|XP_720068.1| hypothetical protein CaO19.7869 [Candida albicans SC5314]
gi|68471790|ref|XP_719938.1| hypothetical protein CaO19.239 [Candida albicans SC5314]
gi|46441784|gb|EAL01078.1| hypothetical protein CaO19.239 [Candida albicans SC5314]
gi|46441919|gb|EAL01212.1| hypothetical protein CaO19.7869 [Candida albicans SC5314]
Length = 1303
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 242/514 (47%), Gaps = 82/514 (15%)
Query: 193 LLADEMGLGKTIQAIAVATCF---RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVV 249
+LADEMGLGKTIQ+I++ T + LI+ P S +W ++W PS V+V
Sbjct: 523 ILADEMGLGKTIQSISLVTYLIEKKHENKFLIIVPLSTITNWTLEFEKW---APSIKVIV 579
Query: 250 LSQLGGSNRSGFTIVSSNTKRNIPLD---GLFNII--SYDVVLKLQNILMSSNFKIVIAD 304
S +R++ D G F ++ +Y+ V++ + +L ++ +I D
Sbjct: 580 YKG------------SQQQRRSLQPDIRYGNFQVLLTTYEYVIRERPMLAKFHYSHMIID 627
Query: 305 ESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYG 364
E H +KNAQ+K + TL K + L+L+GTP + EL+ L + P ++ +V +
Sbjct: 628 EGHRMKNAQSK-LSQTLRTYYKTKNRLILTGTPLQNNLPELWALLNFVLPGIFNSVKSFD 686
Query: 365 NRY-CKGGVFGIYQGASNHEE--------LHNLMKATVMIRRLKKDVLAQLPVKRRQQVF 415
+ + G + EE LH +++ ++RRLKKDV LP K + +
Sbjct: 687 DWFNTPFANTGAQEKIELTEEESLLVIRRLHKVLRP-FLLRRLKKDVEKDLPDKVEKVLK 745
Query: 416 LD------VAEKDMRQIYALFRELEV--VKGKIKACKSE--------------EEVQSLK 453
+ V + M + ALF +V K IK ++ EEV+S+
Sbjct: 746 CNLSGLQYVLYQQMLKHNALFVGADVGGAKSGIKGLNNKIMQLRKICNHPFVFEEVESV- 804
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKK 509
L + T+ ++ + L+ V+ ++G + L+F ++D + K
Sbjct: 805 -----LNSSRLTNDLIWRVSGKFELLDRVLPKFKKSGHRVLMFFQMTQIMDIMEDFLRWK 859
Query: 510 KVHCIRIDGGTPPASRQALVTEFQEKD-DVKAAVLSMKAGGVGLTLTAASTVIFAELSWT 568
+ +R+DG T RQ ++ F D D +LS +AGG+GL L A TVI + W
Sbjct: 860 DMKYLRLDGSTKAEERQDMLKVFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWN 919
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
P +QA+DRAHRIGQ + V + L+ ND+V++++ + KL+ G+V ++
Sbjct: 920 PHQDLQAQDRAHRIGQKNEVRILRLITNDSVEEVILERAHQKLDIDGKV-------IQAG 972
Query: 629 SSQIRSSPAKQKTLDSFLKR-----CNNVDDSEH 657
+S+ +Q ++FLKR N D+ E+
Sbjct: 973 KFDNKSTAEEQ---EAFLKRLLEADANGADNEEN 1003
>gi|338722190|ref|XP_001492263.3| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Equus
caballus]
Length = 1930
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 661 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 720
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 721 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 777
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 778 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 835
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 836 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 885
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 886 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 942
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 943 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1002
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1003 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1062
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1063 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1122
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1123 RFVTRASVEERITQVAKRKM 1142
>gi|262405856|ref|ZP_06082406.1| helicase [Bacteroides sp. 2_1_22]
gi|262356731|gb|EEZ05821.1| helicase [Bacteroides sp. 2_1_22]
Length = 801
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 234/511 (45%), Gaps = 70/511 (13%)
Query: 158 DLREKYDQIPAH---------IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIA 208
DLR + +P + +++KL P+Q++G+RFA + G+ ++ADEMGLGKTIQAI
Sbjct: 172 DLRRRSQLLPDYASDTALDTLLKTKLYPYQKEGIRFAFR-AGKSIIADEMGLGKTIQAIG 230
Query: 209 VATCFRD---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVS 265
A R + LI+ P+SL+ W I+++ + IVV + L G
Sbjct: 231 TAELMRKHQFISSALIICPTSLKYQWKKEIERFTD--AKAIVVEGNHLTRKVLYG----- 283
Query: 266 SNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK 325
+ + I+SY+ V IL S + +I DE LKN + + A I
Sbjct: 284 --------AEEFYKIVSYNSVCNDIKILKSLHTDFLIMDEVQRLKNWNTQISKAARHI-- 333
Query: 326 KAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVF------------ 373
++ Y+++LSGTP L +LE LY ++ ++ +++C G +
Sbjct: 334 ESDYSVILSGTP-------LENKLEELY-----SIMQFVDQFCLGPYYQFLDQTVVRSDT 381
Query: 374 GIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAE--KDMRQIYALFR 431
G N + MK V+IRR KKDV QLP + + +F+ + E ++M Y
Sbjct: 382 GKVVSYKNLNAIGEQMK-NVLIRRRKKDVALQLPGRMDKVLFVPMTEQQRNMHDEYQSIV 440
Query: 432 ELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSA---------EAKIPAVLDYLETV 482
V K SE++ + L + ++ DS + K+ L+ L V
Sbjct: 441 SQLVFKWTKTRFLSEKDRKRLLLMLSQM--RMLCDSTYILDQKTRYDTKVEETLNILRNV 498
Query: 483 IEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
E+G K +IF+ + M I + V + GG P +R+ L F E + +
Sbjct: 499 FESGDEKVVIFSQWERMTRLIAKELDVLGVRYEYLHGGIPSEARKNLTDNFTELPESRV- 557
Query: 542 VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 601
LS AG GL L AS +I +L W P L Q R +RIGQ ++ V L+A+ T+++
Sbjct: 558 FLSTDAGSTGLNLQVASILINLDLPWNPAVLEQRIARIYRIGQKKNIQVINLVASQTIEE 617
Query: 602 IVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
+ + K +LD E+++ + +S+
Sbjct: 618 RMLSTLNFKTSLFEGILDNGEDTIFLENSKF 648
>gi|94268376|ref|ZP_01291158.1| SNF2-related:Helicase-like:SWIM Zn-finger:DEAD/DEAH box
helicase-like [delta proteobacterium MLMS-1]
gi|93451632|gb|EAT02425.1| SNF2-related:Helicase-like:SWIM Zn-finger:DEAD/DEAH box
helicase-like [delta proteobacterium MLMS-1]
Length = 1022
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 235/483 (48%), Gaps = 53/483 (10%)
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRD---VWPVLILTPSS 226
++++L P+Q DG F L GR LLAD+MGLGKT+QAI+ A R+ V +LI+ P+S
Sbjct: 313 VKARLYPYQIDGAAF-LAGTGRALLADDMGLGKTLQAISAAVWLREHEGVRTILIICPAS 371
Query: 227 LRLHWAAMIQQWLNI-------PPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
L+ WA I ++ + PP E V + + F
Sbjct: 372 LKQQWAREIGKFTELDCRVVQGPPPERGVQYRR----------------------ESDFF 409
Query: 280 IISYDVVLKLQNILMSS-NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPA 338
II+Y++VL+ ++L + ++I DE+ +KN + K +A I ++YA +L+GTP
Sbjct: 410 IINYELVLRDLSLLNETLRPDLIILDEAQRIKNWRTKIASAVKLI--PSRYAFVLTGTPL 467
Query: 339 LSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRL 398
+R EL+ ++ + P + + Y + G G N L + A VM+RR
Sbjct: 468 ENRLEELYSLMQVVNPAILGPLWRYMIDFHVTDEKGKVLGYRNLSLLRQRL-APVMLRRD 526
Query: 399 KKDVLAQLP--VKRRQQVFLDVAEKDMRQI-YALFRELEVVKGKIKACKSEE-------E 448
++ V QLP V++R V L ++++ + + L + + SE+ +
Sbjct: 527 RRLVKDQLPDRVEQRLDVELTPQQRELHDVGLSTAGSLARIAKRRPLTPSEQNRLIAGLQ 586
Query: 449 VQSLKFTEKNLINKIYTDSAEA-KIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFL 507
+ L++K S + ++ +LD E +++G K ++F+ + M + Q
Sbjct: 587 QARMACDAAGLVDKESVGSPKIDELAQILD--EVCLQSGLKAVVFSQWELMTRMVEQRLR 644
Query: 508 KKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSW 567
+ + +R+ GG P A R L+ F+ D V LS AGGVGL L +AS ++ ++ W
Sbjct: 645 RLGIGYVRLHGGVPTAKRGELLERFRSDDSV-LVFLSTDAGGVGLNLQSASVLVNLDVPW 703
Query: 568 TPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL--DGHENSL 625
P L Q R HR+GQ + V + ++A ++ ++ V +V++K QV+ D E+ +
Sbjct: 704 NPAVLEQRNGRIHRLGQPNKVQIITMVAANSYEEQVLSLVQNKQALFDQVIAEDASEDVV 763
Query: 626 EVS 628
+S
Sbjct: 764 GIS 766
>gi|380787663|gb|AFE65707.1| chromodomain-helicase-DNA-binding protein 5 [Macaca mulatta]
Length = 1954
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 685 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 744
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 745 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 801
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 802 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 859
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 860 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 909
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 910 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 966
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 967 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1026
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1027 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1086
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1087 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1146
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1147 RFVTRASVEERITQVAKRKM 1166
>gi|402551312|ref|YP_006600031.1| SNF2 family helicase [Mycoplasma genitalium M6282]
gi|401800007|gb|AFQ03323.1| SNF2 family helicase [Mycoplasma genitalium M6282]
Length = 1014
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 220/457 (48%), Gaps = 43/457 (9%)
Query: 172 SKLLPFQRDGVRF--AL---QHGGRILLADEMGLGKTIQAI-AVATCF---RDVWPVLIL 222
+ L +Q++GV++ AL Q GG +LADEMGLGKT Q I A+ + + + P LI+
Sbjct: 576 NNLRKYQKEGVKWIRALEDNQFGG--ILADEMGLGKTAQVIFAMLDSYQSTKSLLPSLII 633
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+SL L+W + Q++ P +IV N + + + K I L FN++
Sbjct: 634 VPASLLLNWKSEFQKF--APHVKIVT-----ANGNFKERSQIYESLKNQILLMS-FNVLR 685
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
D+ + F V+ DE+ +KN + T A I K + L L+GTP +R
Sbjct: 686 SDI-----KWISQKKFHYVVIDEAQGIKNENSTVTKAAKKI--KGNFCLALTGTPIENRL 738
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT--VMIRRLKK 400
++L+ + + P+ N ++ +++ + N E LMK T ++RR K
Sbjct: 739 LDLWSCFDFVLPNFLGNKKQFSDQF---------EKEKNDESFQKLMKKTSPFILRRTKN 789
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLI 460
VL +LP K ++++++E + +++Y + + + K K+ + SL +++
Sbjct: 790 KVLKELPKKIITDIYVELSE-EHQKLYDKQKTDGLKEIKESDAKNALNILSLILKLRHIC 848
Query: 461 -----NKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
N + +K L+ + +E K ++F ++D Q +K+ +
Sbjct: 849 SLVKDNDVNDFEDNSKANTALNIIYEALENKRKVILFTQFLDVIDCFKQTLKNQKIDHLV 908
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
DG +R ++ +F + + S+KAGGVG+ LTAA VI ++ W QA
Sbjct: 909 FDGRKTVKNRNTIIQKFNSAKEPSVMLASLKAGGVGINLTAAEVVIHFDVWWNSAVENQA 968
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
DRAHRIGQ +V VY ++A +T+++ V V K E
Sbjct: 969 TDRAHRIGQSKTVQVYRIIAKNTIEERVCQVQNQKQE 1005
>gi|431906391|gb|ELK10588.1| Chromodomain-helicase-DNA-binding protein 5 [Pteropus alecto]
Length = 1842
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 140/499 (28%), Positives = 222/499 (44%), Gaps = 67/499 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I++ L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 580 KFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 639
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 640 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 696
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 697 VRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 754
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 755 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 804
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 805 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 861
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLD 477
E + K +K C + + + L N Y S+ K L
Sbjct: 862 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVAPVLPNGSYDGSSLVKSSGKLM 921
Query: 478 YLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQ 533
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 922 LLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFN 981
Query: 534 EKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYY 592
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 982 APGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYR 1041
Query: 593 LLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1042 FVTRASVEERITQVAKRKM 1060
>gi|408672858|ref|YP_006872606.1| SNF2-related protein [Emticicia oligotrophica DSM 17448]
gi|387854482|gb|AFK02579.1| SNF2-related protein [Emticicia oligotrophica DSM 17448]
Length = 1004
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 227/465 (48%), Gaps = 41/465 (8%)
Query: 165 QIPAHIESKLLPFQRDG---VRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVW---- 217
++P +++ L P+Q+ G + F ++ LAD+MGLGKTIQ +A ++
Sbjct: 534 EVPKGLKANLRPYQKAGFDWMNFLAEYKLGGCLADDMGLGKTIQTLAFLQGIKENQSGDM 593
Query: 218 --PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD 275
P L++ P+SL +W I+++ P V + G+NR NT++ D
Sbjct: 594 HEPSLLVMPTSLVYNWLKEIEKF---TPELRAFVYT---GTNRE------KNTEQFDNYD 641
Query: 276 GLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSG 335
+ + SY ++ +++ + F VI DES +KN + + A + + + L+L+G
Sbjct: 642 LI--LTSYGILRIDIDVIKNYRFNYVILDESQSIKNPSSHISKAVMQL--NSANRLILTG 697
Query: 336 TPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMI 395
TP + ++L+ Q+ + P + + N Y +Q ++ L++L+K M+
Sbjct: 698 TPLENSTMDLWTQMTFINPGLLGTQTYFKNEYQIP--IERHQDEKQNKRLYSLIKP-FML 754
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAE---KDMRQIYALFRE--LEVVKGKIKACKSEEEVQ 450
RR K V +LP K + D++E K + + +R LE ++ K +Q
Sbjct: 755 RRHKSQVATELPPKVESIHYCDMSEEQEKRYEEAKSYYRNIILEQIEEKGFGKSQMAVLQ 814
Query: 451 SLKFTEK-----NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQL 505
L + ++I++ Y + K VL LET++E G K L+F+ L+ +
Sbjct: 815 GLTKLRQLANHPSMIDETY-EGDSGKHEEVLQKLETIVEEGHKVLVFSQFVKHLEIYREY 873
Query: 506 FLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAEL 565
K + +DG T + RQ V FQ+ D +K ++S+KAGG+GL LTAA V +
Sbjct: 874 LNKHYIRYCYLDGST--SDRQEQVDIFQKDDSIKIFLISLKAGGLGLNLTAAEYVFLLDP 931
Query: 566 SWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
W P QA DRAHRIGQ ++V Y + ++V++ + + R+K
Sbjct: 932 WWNPAIEAQAIDRAHRIGQQNTVFTYKFITRNSVEEKILSLQRNK 976
>gi|238880670|gb|EEQ44308.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida
albicans WO-1]
Length = 1302
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 242/514 (47%), Gaps = 82/514 (15%)
Query: 193 LLADEMGLGKTIQAIAVATCF---RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVV 249
+LADEMGLGKTIQ+I++ T + LI+ P S +W ++W PS V+V
Sbjct: 523 ILADEMGLGKTIQSISLVTYLIEKKHENKFLIIVPLSTITNWTLEFEKW---APSIKVIV 579
Query: 250 LSQLGGSNRSGFTIVSSNTKRNIPLD---GLFNII--SYDVVLKLQNILMSSNFKIVIAD 304
S +R++ D G F ++ +Y+ V++ + +L ++ +I D
Sbjct: 580 YKG------------SQQQRRSLQPDIRYGNFQVLLTTYEYVIRERPMLAKFHYSHMIID 627
Query: 305 ESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYG 364
E H +KNAQ+K + TL K + L+L+GTP + EL+ L + P ++ +V +
Sbjct: 628 EGHRMKNAQSK-LSQTLRTYYKTKNRLILTGTPLQNNLPELWALLNFVLPGIFNSVKSFD 686
Query: 365 NRY-CKGGVFGIYQGASNHEE--------LHNLMKATVMIRRLKKDVLAQLPVKRRQQVF 415
+ + G + EE LH +++ ++RRLKKDV LP K + +
Sbjct: 687 DWFNTPFANTGAQEKIELTEEESLLVIRRLHKVLRP-FLLRRLKKDVEKDLPDKVEKVLK 745
Query: 416 LD------VAEKDMRQIYALFRELEV--VKGKIKACKSE--------------EEVQSLK 453
+ V + M + ALF +V K IK ++ EEV+S+
Sbjct: 746 CNLSGLQYVLYQQMLKHNALFVGADVGGAKSGIKGLNNKIMQLRKICNHPFVFEEVESV- 804
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKK 509
L + T+ ++ + L+ V+ ++G + L+F ++D + K
Sbjct: 805 -----LNSSRLTNDLIWRVSGKFELLDRVLPKFKKSGHRVLMFFQMTQIMDIMEDFLRWK 859
Query: 510 KVHCIRIDGGTPPASRQALVTEFQEKD-DVKAAVLSMKAGGVGLTLTAASTVIFAELSWT 568
+ +R+DG T RQ ++ F D D +LS +AGG+GL L A TVI + W
Sbjct: 860 DMKYLRLDGSTKAEERQDMLKVFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWN 919
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
P +QA+DRAHRIGQ + V + L+ ND+V++++ + KL+ G+V ++
Sbjct: 920 PHQDLQAQDRAHRIGQKNEVRILRLITNDSVEEVILERAHQKLDIDGKV-------IQAG 972
Query: 629 SSQIRSSPAKQKTLDSFLKR-----CNNVDDSEH 657
+S+ +Q ++FLKR N D+ E+
Sbjct: 973 KFDNKSTAEEQ---EAFLKRLLEADANGADNEEN 1003
>gi|402852746|ref|XP_003891074.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 isoform 1
[Papio anubis]
Length = 1954
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 685 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 744
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 745 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 801
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 802 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 859
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 860 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 909
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 910 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 966
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 967 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1026
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1027 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1086
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1087 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1146
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1147 RFVTRASVEERITQVAKRKM 1166
>gi|397503175|ref|XP_003822207.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Pan paniscus]
Length = 1957
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 688 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 747
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 748 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 804
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 805 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 862
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 863 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 912
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 913 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 969
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 970 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1029
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1030 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1089
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1090 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1149
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1150 RFVTRASVEERITQVAKRKM 1169
>gi|350585547|ref|XP_003481984.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Sus
scrofa]
Length = 1865
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 678 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 737
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 738 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 794
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 795 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 852
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 853 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 902
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 903 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 959
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 960 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1019
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1020 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1079
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1080 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1139
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1140 RFVTRASVEERITQVAKRKM 1159
>gi|5911978|emb|CAB55959.1| hypothetical protein [Homo sapiens]
Length = 1388
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 119 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 178
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 179 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 235
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 236 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 293
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 294 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 343
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 344 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 400
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 401 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 460
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 461 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 520
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 521 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 580
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 581 RFVTRASVEERITQVAKRKM 600
>gi|21071044|ref|NP_003060.2| probable global transcription activator SNF2L1 isoform a [Homo
sapiens]
gi|397496290|ref|XP_003818974.1| PREDICTED: probable global transcription activator SNF2L1 isoform 3
[Pan paniscus]
gi|402911366|ref|XP_003918304.1| PREDICTED: probable global transcription activator SNF2L1 isoform 3
[Papio anubis]
gi|115311627|sp|P28370.2|SMCA1_HUMAN RecName: Full=Probable global transcription activator SNF2L1;
AltName: Full=ATP-dependent helicase SMARCA1; AltName:
Full=Nucleosome-remodeling factor subunit SNF2L;
AltName: Full=SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 1
gi|109658918|gb|AAI17448.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Homo sapiens]
gi|119632240|gb|EAX11835.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_c [Homo
sapiens]
gi|384948910|gb|AFI38060.1| putative global transcription activator SNF2L1 isoform a [Macaca
mulatta]
gi|387540732|gb|AFJ70993.1| putative global transcription activator SNF2L1 isoform a [Macaca
mulatta]
gi|410221930|gb|JAA08184.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
gi|410253108|gb|JAA14521.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
gi|410340065|gb|JAA38979.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1054
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 231/481 (48%), Gaps = 61/481 (12%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 199 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 255
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 256 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 308
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 309 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 366
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 367 DFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 421
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 422 MQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 479
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 480 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 539
Query: 524 SRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWTPG 570
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W P
Sbjct: 540 EREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 599
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENS 624
+QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D N
Sbjct: 600 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 659
Query: 625 L 625
L
Sbjct: 660 L 660
>gi|332226354|ref|XP_003262354.1| PREDICTED: LOW QUALITY PROTEIN: probable global transcription
activator SNF2L1 [Nomascus leucogenys]
Length = 1059
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 225/471 (47%), Gaps = 52/471 (11%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 199 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 255
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 256 PSLRVICF--VGDKDARAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 306
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 307 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 364
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + G + E + ++RR+K DV LP K+ +++L ++
Sbjct: 365 ADDFDFWFDTKNCLGDQKLV---ERPQKXVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLS 421
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 422 -KMQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 478
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 479 DEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTP 538
Query: 522 PASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAH
Sbjct: 539 HEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 598
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
RIGQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 599 RIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 649
>gi|168022943|ref|XP_001763998.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162684737|gb|EDQ71137.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 719
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 240/498 (48%), Gaps = 61/498 (12%)
Query: 158 DLREKYDQIPAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR 214
+ +E+ + P +L +Q G+++ + Q+G +LAD+MGLGKT+Q I + + +
Sbjct: 128 NYKEQQEICPLLTGGRLKGYQLKGIKWMISLWQNGLNGILADQMGLGKTVQTIGLLSHLK 187
Query: 215 DV---WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFT---IVSSNT 268
P LI+ P S +W + I+++ +P +++ S G R + +S
Sbjct: 188 GKKMHGPFLIVGPLSTLSNWVSEIKRF--VPSMNVLLYHSSEGRVGREKLRRQHMPTSVP 245
Query: 269 KRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK--RTAATLPIIKK 326
K + P+ + S++V + + L +K +I DE H LKN K R L
Sbjct: 246 KESFPVI----VTSFEVAMNDRRFLAKYKWKYIIVDEGHRLKNCDCKLLRELKQLS---- 297
Query: 327 AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE-- 384
A+ LLL+GTP + EL+ L + P+++ ++ E+ + + + G G +N E
Sbjct: 298 AENLLLLTGTPLQNNLPELWSLLNFILPNIFTSLQEFQSWF---DIAGKASGNNNALESR 354
Query: 385 -------LHNLMKATVMIRRLKKDVLAQLPVKR----------RQQVFLD-VAEKDMRQI 426
LH++++ ++RRLK +V LP K+ +Q+ F D + K + +
Sbjct: 355 KVQVVSKLHHILRP-FLLRRLKSEVEKSLPKKKEIILYTPMTEKQKAFNDHLVAKTLNEY 413
Query: 427 YALFRELEVVKGKI--------KACKSEEEVQSLKFTEKNL--INKIYTDSAEAKIPAVL 476
+A ++K ++ K C + S + N ++++ A+ K+ L
Sbjct: 414 FAEKGNRAMLKAQLNSVCMQLRKNCNHPDLFHSHFEDDINYPPVDELVAQCAKFKLMDRL 473
Query: 477 DYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH--CIRIDGGTPPASRQALVTEFQE 534
L + E G K LIF+ +LD + + +L+++ H C RIDGG + RQ + F E
Sbjct: 474 --LVKLRERGHKVLIFSQMTKILDLL-EYYLEERGHNPC-RIDGGVQQSVRQEQIRSFNE 529
Query: 535 KDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLL 594
+ +LS +AGG+G+ LTAA TVI + W P +QA DR HRIGQ V+VY L
Sbjct: 530 EKSRFVFLLSTRAGGLGINLTAADTVILYDSDWNPHMDMQAMDRCHRIGQTRPVHVYRLA 589
Query: 595 ANDTVDDIVWDVVRSKLE 612
+V+ + V KL+
Sbjct: 590 TAKSVECHMLKVATGKLK 607
>gi|150388431|ref|YP_001318480.1| non-specific serine/threonine protein kinase [Alkaliphilus
metalliredigens QYMF]
gi|149948293|gb|ABR46821.1| Non-specific serine/threonine protein kinase [Alkaliphilus
metalliredigens QYMF]
Length = 1141
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 142/517 (27%), Positives = 248/517 (47%), Gaps = 60/517 (11%)
Query: 145 LVQRAIASASAAPDLRE----KYDQIPAHIESKLLPFQRDGVRFA---LQHGGRILLADE 197
V++ A D++E +YD+ P ++ L +QR G R+ ++G +LAD+
Sbjct: 648 FVKKNKAYRQFIEDIKEFEEVEYDE-PQELKEILRNYQRLGFRWLKSLTRYGLGGILADD 706
Query: 198 MGLGKTIQAIAVATC---FRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLG 254
MGLGKT+Q + R LI++P+SL +W A ++++ P I ++
Sbjct: 707 MGLGKTLQILTYLVDEKEKRGQGTALIVSPTSLVYNWIAEVEKF--TPELRIKAIV---- 760
Query: 255 GSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQA 314
GS I+ + +I I SY ++ + + + +F+ I DE+ +KN +
Sbjct: 761 GSKNEREEIMKEIDEYDII------ITSYPLIRRDAELYETRSFRCCILDEAQHIKNPVS 814
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
+ A I +A + L+GTP + EL+ + + P + H++ R+ K V
Sbjct: 815 QNAKAVKAI--RATHRFALTGTPIENSLTELWSIFDFVMPGYLLSHHKFKGRFEKPIV-- 870
Query: 375 IYQGASNHEELHNLMKAT--VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE 432
+ E L +L K ++RR+K+DVL +LP K ++ ++ E D +++Y +
Sbjct: 871 ---KDRDSEALASLGKLIRPFVLRRMKRDVLQELPEKIESKMVAELTE-DQKKLYLAY-- 924
Query: 433 LEVVKGKIKACKSEEEVQSLKFTEKNL--------INKI------YTDSAEAKIPAVLDY 478
L+ +KG+I +EE++ F + + +I + ++ E LD
Sbjct: 925 LKQIKGQI-----QEEIEQNGFERSQMKILAGLTRLRQICCHPSLFVENYEGG-SGKLDL 978
Query: 479 LETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE 534
LE V+ EAG + L+F+ ML I + ++ + +DG TP +R +V EF E
Sbjct: 979 LEEVVAASLEAGHRILLFSQFTSMLKMIREKLDQQGIEYAYLDGSTPMEARGEIVKEFNE 1038
Query: 535 KDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLL 594
++S+KAGG GL LT A TVI + W P QA DRA+RIGQ + V+V +
Sbjct: 1039 GKG-SIFLISLKAGGTGLNLTGADTVIHFDPWWNPAVEDQATDRAYRIGQKNKVHVMKFI 1097
Query: 595 ANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ 631
A T+++ ++ + K E + V+ E L +SQ
Sbjct: 1098 AQGTIEEKIFKLQERKKEMINAVIQPGETFLAKMNSQ 1134
>gi|46190976|ref|ZP_00120784.2| COG0553: Superfamily II DNA/RNA helicases, SNF2 family
[Bifidobacterium longum DJO10A]
Length = 1062
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 149/524 (28%), Positives = 239/524 (45%), Gaps = 64/524 (12%)
Query: 165 QIPAHIESKLLPFQRDGVRFA---LQHGGRILLADEMGLGKTIQAIAV--------ATCF 213
++P ++ L P+Q +G ++ G +LADEMGLGK++Q IA+ A
Sbjct: 547 EVPDSLKHILRPYQVEGFQWLNTLCDKGFGGILADEMGLGKSVQLIALLLSRYQRNAGEM 606
Query: 214 RD--VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRN 271
D + P LI+ P+SL +W A ++ PS VV++ R T + + +
Sbjct: 607 GDGSLGPSLIVCPASLVYNWGA---EFTKFAPSFNAVVVAGTKAERR---TAIGRAFRAD 660
Query: 272 IPLDGLFNIISYDVVLKLQNILMSSN--FKIVIADESHFLKNAQAKRTAATLPIIKKAQY 329
P I SYD++ + + ++ F ++ DE+ ++KN K A + ++
Sbjct: 661 EPT---VLITSYDLLRRDVDDYTANEQRFNVMALDEAQYIKNHTTKIAKAVKAVAADHRF 717
Query: 330 ALLLSGTPALSRPIELFKQLEALYPDV---YKNVHE-----YGNRYCKGGVFGIYQGASN 381
AL +GTP +R EL+ + L P + YK HE N G + A+
Sbjct: 718 AL--TGTPIENRLSELWSIFDFLMPGLLGSYKRFHERYELPISNARAADGSTAEGRAAAQ 775
Query: 382 --------HEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFR-- 431
+L +L+ + RRLK VL LP K + + +A + R++YA
Sbjct: 776 VNPEAARVSRQLQSLV-GVFIKRRLKSQVLTDLPDKLETTLTVRLA-GEQRKLYAAHEQR 833
Query: 432 ---------ELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAE--AKIPAVLDYLE 480
E + KI+ +++ + + L Y D+ + AK+ A+ + +E
Sbjct: 834 LRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLL----YADAKDQSAKLAAITELVE 889
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
T + G K LIF+ LD I + F + + I G TP R LV +F DD A
Sbjct: 890 TCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVDQFN-ADDTPA 948
Query: 541 AVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
++S+KAG GL LT AS VI A+ W QA DRAHRIGQ VNVY ++A DT++
Sbjct: 949 FLISLKAGNTGLNLTGASVVIHADPWWNAAAQDQATDRAHRIGQTEDVNVYQVVAKDTIE 1008
Query: 601 DIVWDVVRSKLENLGQVLDGH--ENSLEVSSSQIRSSPAKQKTL 642
+ + ++ +K E Q D + +S + +PA TL
Sbjct: 1009 ERILELQHTKSELARQFTDASLLADEAGTGASALTEAPASIATL 1052
>gi|404372085|ref|ZP_10977385.1| hypothetical protein CSBG_00610 [Clostridium sp. 7_2_43FAA]
gi|404301266|gb|EEH96984.2| hypothetical protein CSBG_00610 [Clostridium sp. 7_2_43FAA]
Length = 1008
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 146/526 (27%), Positives = 242/526 (46%), Gaps = 85/526 (16%)
Query: 119 VPFLSSAEKVLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQ 178
+PF++ EK+ N I+NL + EK+D +P + +KL +Q
Sbjct: 523 IPFITGGEKI-------NELIDNL--------------KNKEEKHD-VPKDLNAKLRDYQ 560
Query: 179 RDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAA 233
G + L GG +LAD+MGLGKTIQ I + ++ LI+TP+S+ +W +
Sbjct: 561 IKGYNWLKSIENLGFGG--ILADDMGLGKTIQTITLLLSNKNK-KSLIITPTSVVYNWKS 617
Query: 234 MIQQW---LNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQ 290
+++ LN+ I S ++RN D YDV+L
Sbjct: 618 EFEKFADTLNVG-------------------VIHGSVSERNKVKDEY---KEYDVLLTTY 655
Query: 291 NILMSS-------NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
L S F I DE+ +KN ++K + I KA L L+GTP + +
Sbjct: 656 GTLRSDYQWYEDKKFDFCIIDEAQNIKNKKSKISELVKSI--KANCKLALTGTPIENNLL 713
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVL 403
EL+ + + P N + ++ G + +EL L+ + ++RRLK+DVL
Sbjct: 714 ELWSIFDFIMPGYLYNEERFKGKFLSGD-------DESLKELKELI-SPFILRRLKEDVL 765
Query: 404 AQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKN----- 458
+LP K ++ + + +QIY + + K K + ++ L + K
Sbjct: 766 DELPYKIEKEYLIPMTF-SQKQIYNSYMKEVKKKIKENKKIKDNKIVILSYLTKLRQLCL 824
Query: 459 ----LINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
LI+ +SA KI AV + ++ I++ K +IF+ +L I + ++ +
Sbjct: 825 DPSLLIDDFKEESA--KIKAVKEIIKETIDSNKKIIIFSQFTSVLKKIGNKLEEDDINYL 882
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
+DG R LV EF +D ++S+KAGGVGL LT+AS V+ + W P Q
Sbjct: 883 YLDGSIKAKERINLVDEFNNRDK-NIFLISLKAGGVGLNLTSASVVVHFDPWWNPAVQDQ 941
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDG 620
A DRAHRIGQ + V V L++ DT+++ + + K E + +++DG
Sbjct: 942 ATDRAHRIGQKNIVEVIKLISKDTIEEKIIKLQEEKKELISKIIDG 987
>gi|426240369|ref|XP_004014081.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Ovis aries]
Length = 2056
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 669 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 728
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 729 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 785
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 786 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 843
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 844 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 893
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 894 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 950
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 951 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1010
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1011 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1070
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1071 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1130
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1131 RFVTRASVEERITQVAKRKM 1150
>gi|426327635|ref|XP_004024622.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Gorilla
gorilla gorilla]
Length = 2024
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 755 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 814
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 815 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 871
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 872 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 929
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 930 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 979
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 980 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 1036
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 1037 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1096
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1097 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1156
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1157 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1216
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1217 RFVTRASVEERITQVAKRKM 1236
>gi|296471282|tpg|DAA13397.1| TPA: SWI/SNF related, matrix associated, actin dependent regulator
of chromatin, subfamily a, member 1 [Bos taurus]
Length = 1057
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 231/481 (48%), Gaps = 61/481 (12%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 202 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 258
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 259 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 311
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 312 VIDEAHRIKNEKSKLSEIVRDF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAE 369
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 370 DFDSWFDTKNCLGDQKLV---ERLHTVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 424
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 425 MQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 482
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 483 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 542
Query: 524 SRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWTPG 570
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W P
Sbjct: 543 EREDKFLEVELLGQREAIEAFNIPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 602
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENS 624
+QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D N
Sbjct: 603 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 662
Query: 625 L 625
+
Sbjct: 663 M 663
>gi|393247485|gb|EJD54992.1| hypothetical protein AURDEDRAFT_147677 [Auricularia delicata
TFB-10046 SS5]
Length = 1411
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 141/494 (28%), Positives = 230/494 (46%), Gaps = 64/494 (12%)
Query: 170 IESKLLPFQRDGVRFALQ-HGGRI--LLADEMGLGKTIQAIAVATCF----RDVWPVLIL 222
+ KL +Q G+++ + + R+ +LADEMGLGKTIQ I++ T R P L++
Sbjct: 555 VGGKLKDYQLKGLQWMVSLYNNRLNGILADEMGLGKTIQTISLVTFLIEVKRQPGPYLVI 614
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLD---GLFN 279
P S +W Q+W PS V +S G S +R + D G F
Sbjct: 615 VPLSTLTNWTLEFQKWA---PS--VKTISYKG----------SPAVRRTLQNDIRMGQFQ 659
Query: 280 II--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
++ +Y+ ++K + +L + +I DE H +KN Q+K + TL ++Y L+L+GTP
Sbjct: 660 VLLTTYEYIIKDRPVLSKMRWVHMIIDEGHRMKNTQSK-LSQTLGQYYHSRYRLILTGTP 718
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCK--GGVFGIYQGASNHEE-------LHNL 388
+ EL+ L + P V+ + + + G + N EE LH +
Sbjct: 719 LQNNLPELWSLLNFVLPKVFNSAQSFDEWFNTPFANTGGQDKIELNEEEALLIIRRLHKV 778
Query: 389 MKATVMIRRLKKDVLAQLPVKRRQQVFLDVAE------KDMRQIYALFRELEVVKGK--- 439
++ ++RRLKKDV ++LP K + + ++ K M++ LF E + KGK
Sbjct: 779 LRP-FLLRRLKKDVESELPDKVEKVIKCKLSALQTQLYKQMKKHGMLFAEGKDAKGKQLG 837
Query: 440 -----------IKACKSE---EEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA 485
K C+ EEV+ K LI+ S+ K+ + L +
Sbjct: 838 LKGLNNALMQLRKICQHPYLFEEVEQ-KINPSGLIDDKIIRSS-GKVELLSRILPKLFAT 895
Query: 486 GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD-DVKAAVLS 544
G + LIF ++D + +R+DG T R + V F KD + + +LS
Sbjct: 896 GHRVLIFFQMTKVMDIMSDFMNFMGYKHLRLDGSTKTDERASYVQLFNAKDSEYQVFLLS 955
Query: 545 MKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVW 604
+AGG+GL L A TVI + W P +QA+DRAHRIGQ +V + + +V++ ++
Sbjct: 956 TRAGGLGLNLQTADTVIIFDSDWNPHADLQAQDRAHRIGQTKAVRILRFITEKSVEEAMF 1015
Query: 605 DVVRSKLENLGQVL 618
R KL G+V+
Sbjct: 1016 ARARFKLAIDGKVI 1029
>gi|15834706|ref|NP_296465.1| SNF2 family helicase [Chlamydia muridarum Nigg]
gi|8163131|gb|AAF73530.1| helicase, Snf2 family [Chlamydia muridarum Nigg]
Length = 1181
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 224/462 (48%), Gaps = 45/462 (9%)
Query: 162 KYDQIPAHIESKLLPFQRDGV----RFALQHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++ ++P+ I++ L +Q+DGV R H IL AD+MGLGKT+Q I T R
Sbjct: 705 EFQEVPSQIQATLRSYQKDGVHWLERLRKMHLNGIL-ADDMGLGKTLQTIIAVTQSRLEK 763
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
LI+ P+SL +W +++ P +V+ + R +SS + ++
Sbjct: 764 GGGCSLIICPTSLVYNWK---EEFRKFNPEFKTLVIDGIPSQRRKQ---LSSLEEYDVA- 816
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
I SY+++ K +I F V+ DE+H +KN + R A ++ +I+ A + L+L+
Sbjct: 817 -----ITSYNLLQKDIDIYKDFLFDYVVLDEAHHIKN-RTTRNAKSVKMIR-ACHRLILT 869
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG--ASNHEELHNLMKAT 392
GTP + EL+ + L P + + + +Y + G Y G A N E L + A
Sbjct: 870 GTPIENSLEELWSLFDFLMPGLLSSYDRFVGKYIR---IGNYMGNKADNVEALRRKV-AP 925
Query: 393 VMIRRLKKDVLAQLPVKRR--QQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQ 450
++RR+K+DVL LP L +++++ Q YA E+ ++ + E +
Sbjct: 926 FILRRMKEDVLEDLPPVSEILYHCHLTESQRELYQSYAASARQEL--SRLVKQEGFERIH 983
Query: 451 SLKFTEKNLINKIYTDSA-----------EAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
+ +I A AK ++D L +++++G K ++F+ + ML
Sbjct: 984 IHVLATLTRLKQICCHPAIFAKDTPEPGDSAKYDMLMDLLGSLVDSGHKTVVFSQYTKML 1043
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
I Q K V + +DG T +R +V +F E + ++S+KAGG GL L A T
Sbjct: 1044 GIIKQDLEAKGVPFVYLDGST--KNRLEIVQQFNEDPSLLVFLVSLKAGGTGLNLVGADT 1101
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 601
VI ++ W P QA DR HRIGQ SV+ Y L+ +T+++
Sbjct: 1102 VIHYDMWWNPAVENQATDRVHRIGQSRSVSSYKLVTLNTIEE 1143
>gi|410966154|ref|XP_003989600.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Felis catus]
Length = 2003
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 711 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 770
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 771 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 827
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 828 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 885
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 886 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 935
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 936 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 992
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 993 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1052
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1053 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1112
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1113 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1172
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1173 RFVTRASVEERITQVAKRKM 1192
>gi|148379559|ref|YP_001254100.1| Snf2 family helicase [Clostridium botulinum A str. ATCC 3502]
gi|153931492|ref|YP_001383937.1| SNF2 family helicase [Clostridium botulinum A str. ATCC 19397]
gi|153937278|ref|YP_001387483.1| SNF2 family helicase [Clostridium botulinum A str. Hall]
gi|148289043|emb|CAL83133.1| putative helicase [Clostridium botulinum A str. ATCC 3502]
gi|152927536|gb|ABS33036.1| helicase, Snf2 family [Clostridium botulinum A str. ATCC 19397]
gi|152933192|gb|ABS38691.1| helicase, Snf2 family [Clostridium botulinum A str. Hall]
Length = 1097
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 247/506 (48%), Gaps = 48/506 (9%)
Query: 153 ASAAPDLREKYDQIPAHIESKLLPFQRDGVRFA-----LQHGGRILLADEMGLGKTIQAI 207
+S ++ + + ++P + + L +Q G R+ ++ GG +LADEMGLGKTIQ I
Sbjct: 626 SSRITNINDDHYEVPKKLNATLREYQIAGYRWMKILSNMKFGG--ILADEMGLGKTIQTI 683
Query: 208 AVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSN 267
+ +++ LI+TP+SL +W Q++ + + + GS ++
Sbjct: 684 SFLLSEKEI-KSLIVTPTSLIYNWQDEFQKFAE------TLKIGVIHGSKEERMKVLDDR 736
Query: 268 TKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKA 327
+ ++ L + + D+ L F I DE +KN A+ T + I K
Sbjct: 737 EEYDVLL-TTYGTLKNDIQL-----YKDITFDYCIIDEGQNIKNPLAQSTDSVKRINSKV 790
Query: 328 QYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHN 387
++AL +GTP + +EL+ + + P + + ++ I + +N ++L
Sbjct: 791 RFAL--TGTPIENNLMELWSIFDFIMPGYLYSEERFQEKF-------IDKVEANIDKLKT 841
Query: 388 LMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE 447
L++ ++ RR KKDVL LP K ++ +++ R IY + ++ +K K+K K ++
Sbjct: 842 LIRPFIL-RREKKDVLKDLPHKIEKKFLVEMTTNQER-IYKAY--MKSIKEKLKNNKEDK 897
Query: 448 --------EVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
++ L +I++ S++ +I ++ ++ ++ G K L+F+ +L
Sbjct: 898 ITIFSYLTRLRQLCLDPSIIIDEYKGGSSKLRIA--MELVQEGVDEGKKILLFSQFTSVL 955
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
I +L K+ + +DG T + R LV +F + VK ++S+KAGG GL LT+A+
Sbjct: 956 KNISKLLKKECIEYFYLDGSTNASERIKLVDKFNKNSHVKIFLISLKAGGTGLNLTSANL 1015
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
VI + W P QA DRAHRIGQ + V V L+ T+++ + + K E + V++
Sbjct: 1016 VIHFDPWWNPAVEDQATDRAHRIGQKNLVQVIKLVCKGTIEEKIIMLQEDKKELINNVMN 1075
Query: 620 GHENSLEVSSSQIRSSPAKQKTLDSF 645
++ S + ++ +K++ LD F
Sbjct: 1076 S-----DLKSGNLINTLSKEEILDLF 1096
>gi|355558362|gb|EHH15142.1| hypothetical protein EGK_01192, partial [Macaca mulatta]
Length = 869
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 233/483 (48%), Gaps = 58/483 (12%)
Query: 174 LLPFQRDGV-----RFALQHGGRILLADEMGLGKTIQAIAV----ATCFRDVWPVLILTP 224
L +Q +GV RF Q+G +L DEMGLGKT Q IA+ A D P LIL P
Sbjct: 17 LRSYQLEGVNWLAQRFHCQNG--CILGDEMGLGKTCQTIALLIYLAGRLNDEGPFLILCP 74
Query: 225 SSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--S 282
S+ +W +Q++ PS V + G + ++++ + F+++ +
Sbjct: 75 LSVLSNWKEEMQRF---APSLSCVTYA--------GDKEERACLQQDLKQESHFHVLLTT 123
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQA--KRTAATLPIIKKAQYALLLSGTPALS 340
Y++ LK + L S + +++ DE+H LKN + +T + ++ ++LLL+GTP +
Sbjct: 124 YEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVV----FSLLLTGTPIQN 179
Query: 341 RPIELFKQLEALYPDVY--KNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRL 398
EL+ L + PD++ + V ++ RY I + + + ELH L++ ++RR+
Sbjct: 180 SLQELYSLLSFVEPDLFSKEEVGDFVQRYQD-----IEKESESASELHKLLQP-FLLRRV 233
Query: 399 KKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFRELEVVKGKI-KACKSEEEVQSLKFTE 456
K DV +LP K ++ ++ + A L ++L+ + + K K + + L+
Sbjct: 234 KADVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILSQLR--- 290
Query: 457 KNLINKIYTDSAEAKIPAVLDYL--------------ETVIEAGCKFLIFAHHQPMLDAI 502
K + + D E + V D+L + G + L+F+ MLD +
Sbjct: 291 KCVDHPYLFDGVEPEPFEVGDHLIEASGKLYLLDKLLAFLYSGGHRVLLFSQMTQMLDIL 350
Query: 503 HQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIF 562
+ R+DG R + F ++ + +LS +AGGVG+ LTAA TVIF
Sbjct: 351 QDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IFVFLLSTRAGGVGMNLTAADTVIF 409
Query: 563 AELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
+ + P + +QA RAHRIGQ SV V L+ DTV++IV SKL+ +++G
Sbjct: 410 VDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVSRKAASKLQLTNMIIEGGH 469
Query: 623 NSL 625
+L
Sbjct: 470 FTL 472
>gi|327313991|ref|YP_004329428.1| SNF2 family N-terminal domain-containing protein, partial [Prevotella
denticola F0289]
gi|326946179|gb|AEA22064.1| SNF2 family N-terminal domain protein [Prevotella denticola F0289]
Length = 1340
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 240/472 (50%), Gaps = 43/472 (9%)
Query: 166 IPAHIESKLLPFQRDGVRFALQ---HGGRILLADEMGLGKTIQAIAVATCFRDVWPVLIL 222
+P ++++L +Q +G + + G + LAD+MGLGKT+Q A+ ++ LI+
Sbjct: 879 VPKTLQAQLRDYQEEGFEWMSKLTAWGAGVCLADDMGLGKTVQTTALLLEQQEKGASLIV 938
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNI--PLDGLFNI 280
P+S+ +W ++++ P+ V VL+Q S + ++I G I
Sbjct: 939 APASVVPNWCNELRRF---APTLNVTVLNQ------------SEDRSKDIKEAKAGDIII 983
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
I+Y ++ Q L + + +V DE+H +KNA K + A + + +AQ ++L+GTP +
Sbjct: 984 ITYALLNIQQEDLTAHEWNVVCLDEAHTIKNANTKMSKAAMRL--QAQRRVILTGTPIQN 1041
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK--ATVMIRRL 398
EL+ + + P + + ++ ++ + I +G ++ L K + ++RR
Sbjct: 1042 HLAELWNLFQFINPGLLGSAEQFKKKF----ILPI-EGDNDKNRQSQLRKLISPFLLRRT 1096
Query: 399 KKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEK- 457
K +V+ +LP K ++ ++++ +M A++ + +++ +L +
Sbjct: 1097 KSEVIDELPEKNEIKLPVELSSDEM----AMYEVRRRETEERVRANVGDKMSTLAEITRL 1152
Query: 458 -------NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKK 510
+L+++ + + +K+ A +D E++ E+G + L+F+ + + Q K K
Sbjct: 1153 RQMACSCSLVDRKWKLPS-SKVLAFIDLAESLDESGNRALVFSQFTSFFEEVKQAMDKAK 1211
Query: 511 VHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPG 570
+ + +DG TP A R+ LV +FQ ++S+KAGG+GL LT A+ VI + W P
Sbjct: 1212 LSYLYLDGSTPMAMREKLVKDFQ-TGKCPFFLISLKAGGLGLNLTGANYVIHLDPWWNPA 1270
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHE 622
QA DRA+RIGQ +V VY+L++ T+++ + + ++K +L+G +
Sbjct: 1271 IEQQATDRAYRIGQKQNVTVYHLISQHTIEEKILRLHKTKRNLSDSLLEGSD 1322
>gi|410304366|gb|JAA30783.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1053
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 231/481 (48%), Gaps = 61/481 (12%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 199 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 255
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 256 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 308
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 309 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 366
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 367 DFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 421
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 422 MQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 479
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 480 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 539
Query: 524 SRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWTPG 570
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W P
Sbjct: 540 EREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 599
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENS 624
+QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D N
Sbjct: 600 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 659
Query: 625 L 625
L
Sbjct: 660 L 660
>gi|417794773|ref|ZP_12442011.1| bacterial SNF2 helicase associated [Streptococcus oralis SK255]
gi|334267372|gb|EGL85834.1| bacterial SNF2 helicase associated [Streptococcus oralis SK255]
Length = 1031
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 141/482 (29%), Positives = 229/482 (47%), Gaps = 56/482 (11%)
Query: 170 IESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FRDVWPVLILT 223
+++ L +Q GVR+ L H GG +LAD+MGLGKT+Q IA T + VLIL
Sbjct: 578 VQASLRDYQEKGVRWLQMLHHYGFGG--ILADDMGLGKTLQTIAFLTSQVTEYSRVLILA 635
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
PS L +WA +++ P ++ VV +NR I+S N + + SY
Sbjct: 636 PSGLIYNWADEFRKF--APQLDLAVVHGL--KANREA--ILSENHQ--------IYVTSY 681
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
+ + F + DE+ +KNAQ K + + A +AL SGTP +
Sbjct: 682 ATFRQDSELYQEMAFDFLFLDEAQVMKNAQTKIAQSLRQFVVPAVFAL--SGTPIENHLG 739
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVL 403
EL+ + + P + + E+ + + +K VM RR K++VL
Sbjct: 740 ELWSIFQIVLPGLLPSKKEFMKLPA--------------DRVAQFIKPFVM-RRKKEEVL 784
Query: 404 AQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE------EVQSLKFTEK 457
+LP + V+ + E + IY +L+ ++ ++ +E E+ S +
Sbjct: 785 TELP-DLIEVVYKNELEDQQKAIY--LAQLQQMRDRLAQVTDQEFQRSRVEILSGLMRLR 841
Query: 458 NLINK--IYTDS---AEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
+ + ++ D+ A K+ ++ D L V + G + LIF+ + ML+ I Q +
Sbjct: 842 QICDTPALFMDNYQGASGKLDSLRDLLLQVADGGHRVLIFSQFKGMLEKIEQELPNLGLT 901
Query: 513 CIRIDGGTPPASRQALVTEF-QEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
+I G TP RQ + F Q + D+ ++S+KAGGVGL LT A TVI +L W P
Sbjct: 902 SFKITGSTPAQDRQEMTKIFNQGERDI--FLISLKAGGVGLNLTGADTVILVDLWWNPAV 959
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ 631
QA RAHR+GQ V VY L+ T+++ + ++ K + QVLDG E+ +S ++
Sbjct: 960 EAQAIGRAHRMGQERKVEVYRLITRGTIEEKIQELQEQKRHLVSQVLDGTESRASLSLAE 1019
Query: 632 IR 633
IR
Sbjct: 1020 IR 1021
>gi|336054060|ref|YP_004562347.1| non-specific serine/threonine protein kinase [Lactobacillus
kefiranofaciens ZW3]
gi|333957437|gb|AEG40245.1| Non-specific serine/threonine protein kinase [Lactobacillus
kefiranofaciens ZW3]
Length = 1179
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 135/474 (28%), Positives = 225/474 (47%), Gaps = 48/474 (10%)
Query: 162 KYDQIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDV 216
K + +PA + L P+Q+ G + GG LLADEMGLGKT+Q +A+ ++
Sbjct: 705 KQNMVPASLARILRPYQKAGFNWLSTIVNYNFGG--LLADEMGLGKTLQILALILARKEQ 762
Query: 217 WP----VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNI 272
LI+ P+S+ +W ++ P+ V VL G N+ T + + +
Sbjct: 763 KKEHSFSLIVAPASVVYNWQNEANKF---TPNLRVAVL----GGNKQARTSLLRDAQNYD 815
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
L + +++D+ F + I DE+ +KN Q+ TA ++ +I+ A + L
Sbjct: 816 LLITSYQSLNHDL-----EAYQGLTFDLEIIDEAQNIKNYQS-VTAQSVKVIQ-AHHKLA 868
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK-- 390
L+GTP ++ EL+ + L P + ++ +Y V N +++ +
Sbjct: 869 LTGTPIENKLSELWSIFDYLMPGFLGSYLDFRKKYEIPIV------KENKQDIQKQLSDQ 922
Query: 391 -ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRE--LEVVKGKIKACKSEE 447
A ++RRLKKDVLA LP K + V + ++ K ++Y L + + + G+ A +
Sbjct: 923 VAPFILRRLKKDVLADLPEKDEEIVKVKMSGKQA-ELYNLQTQKIIAQLNGQGNADFKKS 981
Query: 448 EVQSLKFTEKNLINKIYTD---------SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPM 498
Q L K I +I D AK+ A ++ ++ +E G K L+F+ M
Sbjct: 982 RFQVLAQITK--IREICCDPHLLYENYHGQSAKLIATINLIQDNLENGNKILLFSQFTSM 1039
Query: 499 LDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAS 558
LD +H+ K + I G TP RQ + F D ++S+KAGG G+ LT+A
Sbjct: 1040 LDILHEKLSKLHITLYTITGATPKEKRQEQIHSFNSSDKTAVFLISLKAGGTGINLTSAD 1099
Query: 559 TVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
VI + W QA DRAHRIGQ SV +Y ++A DT+++ + + + K E
Sbjct: 1100 VVIHYDPWWNLAAENQATDRAHRIGQKHSVKIYKMVAQDTIEEKIIALQQKKAE 1153
>gi|292622418|ref|XP_685699.4| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 1
[Danio rerio]
Length = 1953
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 137/498 (27%), Positives = 227/498 (45%), Gaps = 64/498 (12%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQ-AIAVATCFR 214
K+D+ P +++S L P+Q +G+ RF+ G +LADEMGLGKT+Q A+ + + ++
Sbjct: 721 KFDRQPDYLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 780
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN------RSGFTI-- 263
+ P L+ P S ++W + W + + V++ +G + + FT
Sbjct: 781 EGHSKGPFLVSAPLSTIINWEREFEMW-----APDMYVVTYVGDKDSRAVIRENEFTFED 835
Query: 264 -------VSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
+S K+ + + SY+++ Q IL S ++ ++ DE+H LKN Q+K
Sbjct: 836 NAIRGGKKASKMKKEAAVKFHVLLTSYELITIDQAILGSIDWACLVVDEAHRLKNNQSKF 895
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R P+ Q+ LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 896 FRVLNNYPL----QHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 945
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI-YALFREL 433
++LH+++ M+RRLK DV +P K V ++++ + Y L R
Sbjct: 946 DIAKEDQIKKLHDML-GPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKYILTRNF 1004
Query: 434 EVVKGK--------------IKACKSEEEVQSLKFTEK-NLINKIYTDSAEAKIPAVLDY 478
E + + +K C + + TE + N +Y SA K L
Sbjct: 1005 EALNTRGGGNQVSLLNVVMDLKKCCNHPYLFPTAATEAPKMPNGMYDGSALTKASGKLML 1064
Query: 479 LETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE 534
L ++ E G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1065 LFKMLKKLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGVTGGMRQEAIDRFNA 1124
Query: 535 KDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYL 593
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1125 PGAPQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1184
Query: 594 LANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1185 VTKASVEERITQVAKKKM 1202
>gi|419818332|ref|ZP_14342388.1| superfamily II DNA/RNA helicase, partial [Streptococcus sp. GMD4S]
gi|404463401|gb|EKA09051.1| superfamily II DNA/RNA helicase, partial [Streptococcus sp. GMD4S]
Length = 696
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 226/481 (46%), Gaps = 54/481 (11%)
Query: 170 IESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FRDVWPVLILT 223
+++ L +Q VR+ L H GG +LAD+MGLGKT+Q IA T + VLIL
Sbjct: 243 VQASLRDYQEKSVRWLQMLHHYGFGG--ILADDMGLGKTLQTIAFLTSQVTEDGRVLILA 300
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
PS L +WA +++ P ++ VV +NR I+S N + + SY
Sbjct: 301 PSGLIYNWADEFRKF--APQLDLAVVHGL--KANREA--ILSENHQ--------IYVTSY 346
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
+ + F + DE+ +KNAQ K + + A +AL SGTP +
Sbjct: 347 ATFRQDSELYQEMAFDFLFLDEAQVMKNAQTKIAQSLRQFVVPAVFAL--SGTPIENHLG 404
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVL 403
EL+ + + P + + E+ + + +K VM RR K++VL
Sbjct: 405 ELWSIFQIVLPGLLPSKKEFMKLPA--------------DRVAQFIKPFVM-RRKKEEVL 449
Query: 404 AQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE------EVQSLKFTEK 457
+LP + V+ + E + IY +L+ ++ ++ +E E+ S +
Sbjct: 450 TELP-DLIEVVYKNELEDQQKAIY--LAQLQQMRDRLAQVTDQEFQRSRVEILSGLMRLR 506
Query: 458 NLINK--IYTD---SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
+ + ++ D A K+ ++ D L V + G + LIF+ + ML+ I Q +
Sbjct: 507 QICDTPALFMDDYQGASGKLDSLRDLLLQVADGGHRVLIFSQFKGMLEKIEQELPDLGLT 566
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
+I G TP RQ + F + + A ++S+KAGGVGL LT A TVI +L W P
Sbjct: 567 SFKITGSTPAQDRQEMTKAFNQGER-DAFLISLKAGGVGLNLTGADTVILVDLWWNPAVE 625
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
QA RAHR+GQ V VY L+ T+++ + ++ K + QVLDG E+ +S ++I
Sbjct: 626 AQAIGRAHRMGQEQKVEVYRLITKGTIEEKIQELQEQKKHLVSQVLDGTESRASLSLAEI 685
Query: 633 R 633
R
Sbjct: 686 R 686
>gi|281351280|gb|EFB26864.1| hypothetical protein PANDA_007143 [Ailuropoda melanoleuca]
Length = 967
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 231/481 (48%), Gaps = 61/481 (12%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 112 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWV--- 168
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 169 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 221
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 222 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 279
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 280 DFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 334
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 335 MQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 392
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 393 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 452
Query: 524 SRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWTPG 570
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W P
Sbjct: 453 EREDKFLEVELLGQREAIEAFNVPNSNKFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 512
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENS 624
+QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D N
Sbjct: 513 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 572
Query: 625 L 625
L
Sbjct: 573 L 573
>gi|330864739|ref|NP_001178471.1| probable global transcription activator SNF2L1 [Bos taurus]
Length = 1051
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 231/481 (48%), Gaps = 61/481 (12%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 202 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 258
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 259 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 311
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 312 VIDEAHRIKNEKSKLSEIVRDF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAE 369
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 370 DFDSWFDTKNCLGDQKLV---ERLHTVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 424
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 425 MQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 482
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 483 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 542
Query: 524 SRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWTPG 570
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W P
Sbjct: 543 EREDKFLEVELLGQREAIEAFNIPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 602
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENS 624
+QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D N
Sbjct: 603 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 662
Query: 625 L 625
+
Sbjct: 663 M 663
>gi|297304754|ref|XP_002806437.1| PREDICTED: probable global transcription activator SNF2L1-like
[Macaca mulatta]
gi|397496288|ref|XP_003818973.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Pan paniscus]
gi|402911362|ref|XP_003918302.1| PREDICTED: probable global transcription activator SNF2L1 isoform 1
[Papio anubis]
gi|119632241|gb|EAX11836.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_d [Homo
sapiens]
gi|219520696|gb|AAI43955.1| SMARCA1 protein [Homo sapiens]
gi|410340061|gb|JAA38977.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1070
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 234/483 (48%), Gaps = 65/483 (13%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 199 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 255
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 256 PSLRVICF--VGDKDARAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 306
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 307 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 364
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 365 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 420
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 421 -KMQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 477
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 478 DEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTP 537
Query: 522 PASRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWT 568
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W
Sbjct: 538 HEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWN 597
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHE 622
P +QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D
Sbjct: 598 PQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQS 657
Query: 623 NSL 625
N L
Sbjct: 658 NKL 660
>gi|418362320|ref|ZP_12962957.1| SWI/SNF family helicase [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|356686454|gb|EHI51054.1| SWI/SNF family helicase [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 1280
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 223/459 (48%), Gaps = 40/459 (8%)
Query: 159 LREKYDQ---IPAHIESKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATC 212
L++++ Q PA + + L +Q+DGVR+ HG LAD+MGLGKT+QA+ V
Sbjct: 813 LQQEWQQEVECPAELLTPLRDYQKDGVRWLATLAHHGFGACLADDMGLGKTLQALIVLRM 872
Query: 213 FRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNI 272
+ + P L++ P S+ +W + ++ P E+VV + S R G I + + I
Sbjct: 873 RQHLGPALVVVPKSVVTNWQEEVARF--APELEVVVFENP---SEREG-VIRDARAGQVI 926
Query: 273 PLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
+I+Y ++ L L S + ++ DE+ +KNA +R A L + + L
Sbjct: 927 -------LINYGMLGSLAEALKSRRWSSMVLDEAQQIKNAGTQR--AKLLFQLEGDFRLA 977
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
LSGTP + EL+ + P + ++ E+ R FG S H L + +
Sbjct: 978 LSGTPIENHLGELWSLFTFINPGLLGSLGEFKRR------FGKAVKDSQHMALLRAVISP 1031
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL 452
++RRLK+ VL +LP K + ++ ++ RQ+Y R EVV+ ++++ + L
Sbjct: 1032 FILRRLKQQVLTELPDKTEIIHHISLSPEE-RQLYEATRR-EVVQ-QVQSADGRALMHVL 1088
Query: 453 KFTEK--------NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
+ L+ ++ ++ +K+ + L+ I G + L+F+ +L +
Sbjct: 1089 SGLTRLRRLCCSPELVMPEWSQTS-SKLDEAMALLDEAIGNGHRVLVFSQFVDLLSLLRA 1147
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
+KK +DGG SRQ + F+ + V ++S+KAGG GL LT A TV+ +
Sbjct: 1148 RIEQKKWDYCYLDGGCSAKSRQDSILRFRH-EPVPLFLISLKAGGTGLNLTQADTVLHLD 1206
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIV 603
W P QA DRAHR+GQ V VY L+ TV++ +
Sbjct: 1207 PWWNPAVEDQASDRAHRMGQTQPVTVYRLVCEQTVEEKI 1245
>gi|300120100|emb|CBK19654.2| unnamed protein product [Blastocystis hominis]
Length = 1570
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 143/518 (27%), Positives = 240/518 (46%), Gaps = 69/518 (13%)
Query: 128 VLSEISGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESK----LLPFQRDGVR 183
VL G E E + + I + P L +KY++I + E K L +Q +GV
Sbjct: 26 VLRAFVGPQGEFERRNRDISDQIHDPNYRPPL-QKYEKIDKNAEFKDGNQLRSYQIEGVN 84
Query: 184 FALQH---GGRILLADEMGLGKTIQAI----AVATCFRDVWPVLILTPSSLRLHWAAMIQ 236
+ L + +LADEMGLGKT Q+ V ++ +P +++ P S HW A I+
Sbjct: 85 WLLWNWINNRNSILADEMGLGKTAQSTLFMYTVLKKYKLKYPFIVVAPVSTLPHWEAEIR 144
Query: 237 QWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILM 294
+W ++ +V+ G+ +S I+ + I G F+++ +Y++ L +L
Sbjct: 145 RWTDM---HVVI----FHGTVKSRENILRYEWRSKI---GEFDVLITNYEICLVESALLQ 194
Query: 295 SSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYA--LLLSGTPALSRPIELFKQLEAL 352
S + VI DE+H LK K +++ + +LL+GTP + EL+ L L
Sbjct: 195 SIPWSGVIVDEAHRLKGKNNKLGE----MLRTMNFGCKVLLTGTPLQNNTEELWTLLNFL 250
Query: 353 YPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQ 412
P+ + +V ++ FG +G + E+LH L+K +M+RR+K+DV L K
Sbjct: 251 QPERFGDVDQFQ------AEFGDMRGVAQLEKLHTLLKP-LMLRRMKEDVEKSLKPKEET 303
Query: 413 QVFLDVAEKDMRQIYALFRELEVVKG--------------KIKACKSEEEVQSLKFTEKN 458
+ +++ + A++ V G +I+ C + + ++ E +
Sbjct: 304 VINVEMTAMQKKFYRAVYDRNTSVIGNESKNLPSLINIMMEIRKCCNHPYL--IRGAESS 361
Query: 459 LINKIYTDSAEAKIP--------------AVLDYLETVIEA-GCKFLIFAHHQPMLDAIH 503
++ +I T +++ K +LD L +++ G + L+F+ MLD I
Sbjct: 362 IMLEIRTPASDWKGEELVLQALLTSSGKMVLLDKLLPKLQSQGHRVLLFSQMTHMLDIIQ 421
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAAVLSMKAGGVGLTLTAASTVIF 562
K RIDGG RQA + F D ++ +AGGVG+ LTAA TVI
Sbjct: 422 DYLTLKGYLFERIDGGVKSNDRQAAIERFSAPGSDRFIFLICTRAGGVGINLTAADTVII 481
Query: 563 AELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+ W P + IQA+ R HRIGQ +V VY L+ N T +
Sbjct: 482 YDSDWNPQNDIQAQARCHRIGQDKAVKVYRLITNRTYE 519
>gi|405123294|gb|AFR98059.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Cryptococcus neoformans var. grubii H99]
Length = 1430
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 220/461 (47%), Gaps = 50/461 (10%)
Query: 193 LLADEMGLGKTIQAIAVATCF----RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
+LADEMGLGKTIQ I++ T + P L++ P S +W ++W P+ +
Sbjct: 588 ILADEMGLGKTIQTISLITYLIEKKKQPGPFLVIVPLSTLTNWTMEFERWA---PAVRTL 644
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHF 308
+L R + + + +D + +Y+ ++K + +L + +I DE H
Sbjct: 645 ILKGSPAVRREAYPRLRA-------VDFQVCLTTYEYIIKERPLLSRIKWIHMIIDEGHR 697
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
+KN ++K + TL ++Y L+L+GTP + EL+ L + P ++ +V + +
Sbjct: 698 MKNVKSK-LSQTLNEYYSSRYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWF- 755
Query: 369 KGGVFGIYQGAS---NHEE-------LHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDV 418
F G N EE LH +++ ++RRLKKDV ++LP K + ++ +
Sbjct: 756 -NAPFANTGGEKMEMNEEEALLVVKRLHKVLRP-FLLRRLKKDVESELPDKVEKVIYTKM 813
Query: 419 AEKDMRQIYALFRELEVVKGKIKACKSE--EEVQSLKFTEKNLINKIY------------ 464
+ + +Y ++ + + + K + + +Q+ + + N Y
Sbjct: 814 SALQWK-LYESVQKYKTLPTDMSVAKPQKRQNLQNALMQLRKICNHPYVFREVDEDFTVG 872
Query: 465 --TDSAEAKIPAVLDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDG 518
TD ++ + L+ ++ + G K LIF ++ + F + R+DG
Sbjct: 873 NTTDEQIIRVAGKFELLDRILPKLFKTGHKVLIFFQMTEIMTIVSDFFDYRGWKYCRLDG 932
Query: 519 GTPPASRQALVTEFQEKDD-VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
T RQ L++ F + + + +LS +AGG+GL L +A TVI + W P +QA+D
Sbjct: 933 STKAEDRQTLLSTFNDPNSPYQVFILSTRAGGLGLNLQSADTVIIYDTDWNPHADLQAQD 992
Query: 578 RAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
RAHRIGQ V V L+++ TV+++V + KLE G+V+
Sbjct: 993 RAHRIGQKKEVRVLRLISSGTVEELVLARAQRKLEIDGKVI 1033
>gi|126660775|ref|ZP_01731871.1| SWI/SNF family helicase [Cyanothece sp. CCY0110]
gi|126617919|gb|EAZ88692.1| SWI/SNF family helicase [Cyanothece sp. CCY0110]
Length = 1400
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 233/483 (48%), Gaps = 38/483 (7%)
Query: 165 QIPAHIESKLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
Q+P+ + +L +Q +G + L H LAD+MGLGKTIQA+A P LI
Sbjct: 936 QLPSTFQGELRDYQLEGFHWLARLSHWDVGACLADDMGLGKTIQALAAILTRATAGPTLI 995
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
+ P+S+ +W I + P+ ++ G NR + N + P D L I
Sbjct: 996 VAPTSVCFNW---IDECFKFAPTLNPILF---GSGNRQE---ILDNLQ---PFDLL--IC 1041
Query: 282 SYDVVLK--LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
SY ++ + + +L +++ ++ DE+ F+KN KR+ A + + + Q+ L+ +GTP
Sbjct: 1042 SYGLLQQESVAAMLAEVSWQTIVLDEAQFIKNMTTKRSQAAMKL--QGQFKLITTGTPLE 1099
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV---MIR 396
+ EL+ + P + + ++ +R+ + +H+ LH +K + ++R
Sbjct: 1100 NHLGELWNLFRFINPGLLGSKKQFNDRFIAPI------ESDSHKILHQQLKRLIQPFILR 1153
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL---- 452
R K VL++LP + + ++++ ++M AL R+ + ++ +Q L
Sbjct: 1154 RTKTQVLSELPPRTEMLLSVELSNEEMALYEALRRDSLEKLSESDDSGGQKHLQVLAALM 1213
Query: 453 KFTEKNLINKIYTDSAE---AKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKK 509
K + D A +K+ + LE +++ K L+F+ L I ++
Sbjct: 1214 KLRRCCCHPSLVLDDASLKGSKLQLFQEILEELLDNRHKALVFSQFVDHLQIIKSHLDRQ 1273
Query: 510 KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTP 569
K+ +DG TP RQ V FQ + ++S+KAGG GL LTAA VI + W P
Sbjct: 1274 KISYQYLDGSTPKKERQRRVKAFQSGEG-DVFLISLKAGGTGLNLTAADYVIHLDPWWNP 1332
Query: 570 GDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSS 629
QA DRA+RIGQ V VY L+A DT+++ + + K + +L G + S ++S+
Sbjct: 1333 AVEDQATDRAYRIGQQRPVTVYRLVAKDTIEEKIVQLHHRKRDLADSLLSGTDVSAKLST 1392
Query: 630 SQI 632
S++
Sbjct: 1393 SEL 1395
>gi|340353125|ref|ZP_08675953.1| hypothetical protein HMPREF9144_1763 [Prevotella pallens ATCC 700821]
gi|339611321|gb|EGQ16151.1| hypothetical protein HMPREF9144_1763 [Prevotella pallens ATCC 700821]
Length = 1344
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 241/487 (49%), Gaps = 38/487 (7%)
Query: 150 IASASAAPDLREKYDQ-------IPAHIESKLLPFQRDGVRFALQ---HGGRILLADEMG 199
+ S SA +LR++ ++ IP ++++L +Q +G + + G + LAD+MG
Sbjct: 861 LKSNSAINELRQRIEESSKTTPCIPKTLQAQLRDYQEEGFEWMSKVTAWGAGVCLADDMG 920
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRS 259
LGKT+Q I + L++ P+S+ +W ++++ P+ V+VL+Q S+
Sbjct: 921 LGKTLQTITLLLEQSKEGASLVIAPASVVPNWRNELKRF---SPTLNVIVLNQ---SDDR 974
Query: 260 GFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
I + + G I +Y ++ Q L + +V DE+H +KNA K + A
Sbjct: 975 SKAIKDAQS-------GDVVIATYALLNTQQEELTKREWNVVCLDEAHTIKNANTKMSKA 1027
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
+ + +A ++L+GTP + EL+ + + P + + ++ ++ + G
Sbjct: 1028 AMLL--QAHRKVILTGTPIQNHLAELWNLFQFINPGLLGSAEQFKRKFIQP-----IAGN 1080
Query: 380 SNHEELHNLMK--ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELE--V 435
++ E L + + ++RR K +V+ +LP K + ++++ +M R++E V
Sbjct: 1081 NDKERQSQLRRLISPFLLRRTKSEVIEELPTKNDIYIPVELSSDEMTMYEVRRRQVEAAV 1140
Query: 436 VKGKIKACKSEEEVQSLK--FTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFA 493
+ K + E+ L+ +L++ + +K+ LD E + ++G + L+F+
Sbjct: 1141 LADKSLNVSTLSEITRLRQMACSCSLVDSNWKIPG-SKLLTFLDLAEGLNDSGNRALVFS 1199
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLT 553
LD + + K K+ + +DG TP R+ LV +FQ ++S+KAGG+GL
Sbjct: 1200 QFTSYLDEVRKAMEKAKLPFLYLDGNTPMTKREQLVKDFQ-TGKCPFFLISLKAGGLGLN 1258
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLEN 613
LT A+ VI + W P QA DRA+RIGQ V VY+L++ T+++ + + ++K
Sbjct: 1259 LTGANYVIHLDPWWNPAIEQQATDRAYRIGQQQDVTVYHLISQHTIEEKILRLHKTKRNL 1318
Query: 614 LGQVLDG 620
+L+G
Sbjct: 1319 ADSLLEG 1325
>gi|58260538|ref|XP_567679.1| hypothetical protein CNK02030 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229760|gb|AAW46162.1| hypothetical protein CNK02030 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1558
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 220/461 (47%), Gaps = 50/461 (10%)
Query: 193 LLADEMGLGKTIQAIAVATCF----RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
+LADEMGLGKTIQ I++ T + P L++ P S +W ++W P+ +
Sbjct: 716 ILADEMGLGKTIQTISLITYLIEKKKQPGPFLVIVPLSTLTNWTMEFERWA---PAVRTL 772
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHF 308
+L R + + + +D + +Y+ ++K + +L + +I DE H
Sbjct: 773 ILKGSPAVRREAYPRLRA-------IDFQVCLTTYEYIIKERPLLSRIKWIHMIIDEGHR 825
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
+KN ++K + TL ++Y L+L+GTP + EL+ L + P ++ +V + +
Sbjct: 826 MKNVKSK-LSQTLNEYYSSRYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWF- 883
Query: 369 KGGVFGIYQGAS---NHEE-------LHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDV 418
F G N EE LH +++ ++RRLKKDV ++LP K + ++ +
Sbjct: 884 -NAPFANTGGEKMEMNEEEALLVVKRLHKVLRP-FLLRRLKKDVESELPDKVEKVIYTKM 941
Query: 419 AEKDMRQIYALFRELEVVKGKIKACKSE--EEVQSLKFTEKNLINKIY------------ 464
+ + +Y ++ + + + K + + +Q+ + + N Y
Sbjct: 942 SALQWK-LYESVQKYKTLPTDMSVAKPQKRQNLQNALMQLRKICNHPYVFREVDEDFTVG 1000
Query: 465 --TDSAEAKIPAVLDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDG 518
TD ++ + L+ ++ + G K LIF ++ + F + R+DG
Sbjct: 1001 NTTDEQIIRVAGKFELLDRILPKLFKTGHKVLIFFQMTEIMTIVSDFFDFRGWKYCRLDG 1060
Query: 519 GTPPASRQALVTEFQEKDD-VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
T RQ L++ F + + + +LS +AGG+GL L +A TVI + W P +QA+D
Sbjct: 1061 STKAEDRQTLLSTFNDPNSPYQVFILSTRAGGLGLNLQSADTVIIYDTDWNPHADLQAQD 1120
Query: 578 RAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
RAHRIGQ V V L+++ TV+++V + KLE G+V+
Sbjct: 1121 RAHRIGQKKEVRVLRLISSGTVEELVLARAQRKLEIDGKVI 1161
>gi|395731282|ref|XP_002811619.2| PREDICTED: chromodomain-helicase-DNA-binding protein 5, partial
[Pongo abelii]
Length = 1588
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 395 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 454
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 455 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 511
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 512 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 569
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 570 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 619
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 620 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 676
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 677 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 736
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 737 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 796
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 797 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 856
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 857 RFVTRASVEERITQVAKRKM 876
>gi|340052319|emb|CCC46595.1| putative transcription activator [Trypanosoma vivax Y486]
Length = 1129
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 220/480 (45%), Gaps = 56/480 (11%)
Query: 167 PAHIESKLLPFQRDGVRFALQHGGRIL---LADEMGLGKTIQAIAVATCFRDV----WPV 219
P +I KL P+Q +GV + L R + LADEMGLGKT+Q I+ + P
Sbjct: 169 PTYIRGKLRPYQIEGVNWLLGLFSRCINGILADEMGLGKTLQTISTLAYLKFSHGLPGPH 228
Query: 220 LILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN--RSGFTIVSSNTKRNIPLDGL 277
L++ P S+ +W I+ W P+ + + GSN R N I D +
Sbjct: 229 LVVCPKSVMGNWYREIRHWC---PA---LRAYKFHGSNDVRRQLIKAHLNPHEKIKYDIV 282
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
+ ++++V++ L + ++ +I DE+H LKN ++ R+ L I + Y L+++GTP
Sbjct: 283 --VTTFEMVIEECTSLKNIPWQYLIVDEAHKLKNEES-RSHTVLHSIP-SNYRLIITGTP 338
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV--MI 395
+ EL+ L L P ++ N + F G + + L+N+ K V MI
Sbjct: 339 LQNNLKELWALLHFLAPRLFDNSESFQ------AWFDTASGQQDSDALNNMHKVLVPLMI 392
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMR-QIYALFRELEVVKGKIKACKSEEEVQS-LK 453
RR+K DV +P K+ V + + R ++ L ++ E + K + + V S +
Sbjct: 393 RRMKADVSTGIPPKKEIYVSCKLTKTQRRWYMHVLAKDAEALN---KGSRGQMSVLSNVL 449
Query: 454 FTEKNLINKIYT-DSAEAKIPAVLDYLETVIEAGCKFLI--------------------F 492
+ +IN Y D E P + D E +++ K LI F
Sbjct: 450 MNLRKVINHPYMMDGGEDGPPFITD--ERIVKYSGKMLILDKLLNRLFRDEKEKHKVLIF 507
Query: 493 AHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD-DVKAAVLSMKAGGVG 551
+ MLD + + H RIDG T R + + F + D +LS +AGG+G
Sbjct: 508 SQFTSMLDILDDYCAMRGYHTCRIDGNTSGYDRDSQMALFNSPNGDCFIFLLSTRAGGLG 567
Query: 552 LTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ L AA+ VI + W P +QA+DRAHRIGQ V VY + + TV++ ++ KL
Sbjct: 568 INLQAANHVIIYDSDWNPQMDLQAQDRAHRIGQKRVVRVYRFVTDGTVEEKIYRRALKKL 627
>gi|345800756|ref|XP_546747.3| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Canis lupus
familiaris]
Length = 1986
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 722 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 781
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 782 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 838
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 839 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 896
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 897 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 946
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 947 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 1003
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 1004 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1063
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1064 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1123
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1124 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1183
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1184 RFVTRASVEERITQVAKRKM 1203
>gi|296479122|tpg|DAA21237.1| TPA: chromodomain helicase DNA binding protein 5 [Bos taurus]
Length = 2099
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 773 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 832
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 833 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 889
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 890 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 947
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 948 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 997
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 998 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 1054
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 1055 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1114
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1115 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1174
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1175 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1234
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1235 RFVTRASVEERITQVAKRKM 1254
>gi|126660084|ref|ZP_01731204.1| SWI/SNF family helicase [Cyanothece sp. CCY0110]
gi|126618604|gb|EAZ89353.1| SWI/SNF family helicase [Cyanothece sp. CCY0110]
Length = 1400
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 131/484 (27%), Positives = 235/484 (48%), Gaps = 40/484 (8%)
Query: 165 QIPAHIESKLLPFQRDGVRFA--LQHGG-RILLADEMGLGKTIQAIAVATCFRDVWPVLI 221
++P+ + +L +Q +G + L H G LAD+MGLGKTIQA+A P LI
Sbjct: 936 KLPSTFQGELRDYQLEGFHWLARLSHWGVGACLADDMGLGKTIQALAAILTRASDGPTLI 995
Query: 222 LTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII 281
+ P+S+ +W I + P+ ++ G NR + N + P D L I
Sbjct: 996 VAPTSVCFNW---IDECFKFAPTLNPILF---GSGNRQE---ILDNLQ---PFDLL--IC 1041
Query: 282 SYDVVLK--LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
SY ++ + + +L +++ ++ DE+ F+KN KR+ A + + + Q+ L+ +GTP
Sbjct: 1042 SYGLLQQDSVAAMLAEVSWQTIVLDEAQFIKNMTTKRSQAAMKL--QGQFKLITTGTPLE 1099
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV---MIR 396
+ EL+ + P + + ++ +R+ + H+ LH +K + ++R
Sbjct: 1100 NHLGELWNLFRFINPGLLGSKKQFNDRFIAPI------ESDQHKILHQQLKHLIQPFILR 1153
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTE 456
R K VL++LP + + ++++ ++M AL R+ + ++ +Q L
Sbjct: 1154 RTKTQVLSELPPRTEMLLSVELSNEEMALYEALRRDSLEKLSESDDSGGQKHLQVLAALM 1213
Query: 457 K--------NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLK 508
K +LI Y+ +K+ + LE +++ K L+F+ L + +
Sbjct: 1214 KLRRCCCHPSLILD-YSSLKGSKLQLFQEILEELLDNRHKALVFSQFVDHLQIVKSHLER 1272
Query: 509 KKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWT 568
+K+ +DG TP RQ V FQ + ++S+KAGG GL LTAA VI + W
Sbjct: 1273 QKISYQYLDGSTPKKERQRRVKAFQSGEG-DVFLISLKAGGTGLNLTAADYVIHLDPWWN 1331
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
P QA DRA+RIGQ V VY L+A DT+++ + + K + +L G + S ++S
Sbjct: 1332 PAVEDQATDRAYRIGQQRPVTVYRLVAKDTIEEKIVQLHHRKRDLADSLLSGTDISAKLS 1391
Query: 629 SSQI 632
+S++
Sbjct: 1392 TSEL 1395
>gi|428182488|gb|EKX51349.1| hypothetical protein GUITHDRAFT_44788, partial [Guillardia theta
CCMP2712]
Length = 471
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 234/483 (48%), Gaps = 86/483 (17%)
Query: 174 LLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCF---RDVW-PVLILTPSS 226
L P+Q+ G + + + G +LADEMGLGKT+Q I++ + + +W P L++ P+S
Sbjct: 1 LKPYQKIGFNWLIGLYEQGLNGILADEMGLGKTVQTISLLSWLAEEKSIWGPFLVVAPTS 60
Query: 227 LRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVV 286
+W + +Q++ P +++ G+N + +R + N +S
Sbjct: 61 TMHNWYSELQKF--CPQMKVIPYF----GANPN---------ERKLLRRLWTNPVSLGTP 105
Query: 287 LKLQNILMSSNFKIVIADESHF---------LKNAQAKRTAAT----LPIIKKAQYALLL 333
++L+ +N+K+++ADE HF L AQA +++A+ + + + LLL
Sbjct: 106 GAPFHVLV-TNYKLIVADEKHFQRVKWQYMILDEAQAIKSSASQRWKILLGFNCRNRLLL 164
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCK-------GGVFGIYQGASNHEELH 386
+GTP + EL+ L + P+++ + ++ + K G G+ Q +
Sbjct: 165 TGTPIQNSMAELWALLHFIMPELFDSFSDFTEWFSKDIESSAEGKGTGMDQAQLRRLQ-- 222
Query: 387 NLMKATVMIRRLKKDVLAQL----------PVKRRQQVFLDVAE---------------- 420
L+ M+RR KKDVL +L P+ RQ+ + D+ +
Sbjct: 223 -LILQPFMLRRTKKDVLDELVHKVEIEVRTPLSSRQKYYYDMLKRRVTSTAELLDRKMLS 281
Query: 421 KDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLE 480
KD +++++L + +V K C E F ++ I+ + + +LD L
Sbjct: 282 KDDKRLHSL---MNLVMQFRKVCNHPE-----IFERRDFISPLQFQ----EYLRILDELL 329
Query: 481 TVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD-DV 538
++A G K L+F M+D + F +K +R+DG A R+ +V +FQ +D DV
Sbjct: 330 PKLKAEGHKVLMFCQMTKMMDILEDYFWYRKHTYLRLDGSASIADRRDMVNDFQSEDSDV 389
Query: 539 KAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
+LS +AGG+G+ LTAA TV+F + W P QA DRAHR+GQ V VY L++ +T
Sbjct: 390 FIFLLSTRAGGLGINLTAADTVVFYDSDWNPTMDAQAMDRAHRLGQTKQVTVYRLVSKNT 449
Query: 599 VDD 601
+++
Sbjct: 450 IEE 452
>gi|348681788|gb|EGZ21604.1| hypothetical protein PHYSODRAFT_329533 [Phytophthora sojae]
Length = 2117
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 143/518 (27%), Positives = 238/518 (45%), Gaps = 70/518 (13%)
Query: 139 IENLHPLVQRAIASASAAPDLREKYDQIPAHI-ESKLLPFQRDGVR---FALQHGGRILL 194
I HP + P KY + P + ++ L +Q +G+ F + +L
Sbjct: 988 INGAHPAT---YSDVRPEPSTWAKYQESPVYNNQNTLRSYQLEGLNWMTFCWYNRRNCIL 1044
Query: 195 ADEMGLGKTIQAIAVATCFRDV----WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVL 250
ADEMGLGKT+QA ++ R P L++ P + +W I+ W ++ VV
Sbjct: 1045 ADEMGLGKTVQATSILEHLRQREFIRGPFLVVAPLATLGNWKREIETWTSM---NCVVYH 1101
Query: 251 SQLGGSNRSGFT-------IVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIV 301
GGS+ F ++ +R I FN++ SY ++ L + +++ +
Sbjct: 1102 DSEGGSDIRAFIREQEFHFASEAHRRRGI---YKFNVLVTSYQTLMMDAEYLETIHWRYL 1158
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQY--ALLLSGTPALSRPIELFKQLEALYPDVYKN 359
+ DE+H LKN +AK L ++ + LL++GTP + EL+ L + PD + +
Sbjct: 1159 VIDEAHKLKNREAK----LLQVLHGFTWDSCLLMTGTPLQNGVFELWCLLNFIEPDKFPS 1214
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + FG A +LH ++ M+RR+K+DV +P K ++ +DV
Sbjct: 1215 QQQFYDE------FGDLNTAEQVAQLHEQLRP-YMLRRVKEDVEKSIPPK--EETIVDVE 1265
Query: 420 EKDMRQIY--ALFRE---------------LEVVKGKIKAC-------KSEEEVQSLKFT 455
M++ Y A+F L V+ +++ C + E+ + F
Sbjct: 1266 LTTMQKKYYRAIFERNRSFLNMGASGTVANLVNVEMELRKCCNHPFLIRGVEDKECAGFD 1325
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVI-EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
E+ L KI ++ + +LD L T + K LIF+ + MLD I + +
Sbjct: 1326 EQ-LRTKILIQASGKTV--LLDKLLTKFRQEKKKVLIFSQFKIMLDIIEDMCQLRGYTME 1382
Query: 515 RIDGGTPPASRQALVTEFQEKD-DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
R+DG SRQA + F + D A +LS +AGGVG+ L AAS VI + W P + +
Sbjct: 1383 RLDGSVRGNSRQAAIDRFNNPESDTFAFLLSTRAGGVGINLIAASVVILFDSDWNPQNDL 1442
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
QA R HRIGQ SVN+Y L+ T + ++++ KL
Sbjct: 1443 QAVARCHRIGQTQSVNIYRLVTKKTYEAQMFEIASKKL 1480
>gi|67483974|ref|XP_657207.1| helicase [Entamoeba histolytica HM-1:IMSS]
gi|56474451|gb|EAL51818.1| helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449703822|gb|EMD44192.1| helicase, putative [Entamoeba histolytica KU27]
Length = 955
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 140/473 (29%), Positives = 227/473 (47%), Gaps = 40/473 (8%)
Query: 163 YDQIPAHIES-KLLPFQRDGVRFALQH---GGRILLADEMGLGKTIQAIAVATCFRDVW- 217
++ P +I++ +L PFQ D + + ++ G +LADEMGLGKT+++I++ V
Sbjct: 93 FENSPPYIKNGQLKPFQIDALNWLIRRHHLGVNSILADEMGLGKTLESISLLGYLYHVQD 152
Query: 218 ---PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P ++++P S +W I +WL PS I V L +GG+ S N ++ L
Sbjct: 153 CHGPHIVISPKSTIDNWKNEINKWL---PS-IKVAL--MGGTRESREDCRKENFDKD-KL 205
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
I SY V+ K +++L F +I DE+H KN R L I A + L L+
Sbjct: 206 KADVIICSYQVISKEKSLLKKQKFVYLILDEAHSAKNENT-RFYNDLSEIN-ASHKLFLT 263
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVM 394
GTP + EL+ L+ L P+++ N E + + +QG + + + +K M
Sbjct: 264 GTPLQNTLHELWSLLQFLLPEIF-NTKELDEIF-ESIESDKFQGYIDS--IRDFIKP-FM 318
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIY---ALFRELEVVKG-KIKACKSEEEVQ 450
+RRLK DV +LP K ++F+ + ++I+ L ++ V+ G KI K +
Sbjct: 319 LRRLKTDVQKELPPKMEIKIFVQLTP--FQKIWYRKVLMGDVTVIIGDKIVKSKLNNTMT 376
Query: 451 SLKFTEKN-----------LINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
L+ + +N + + AK+ + +E ++ K LIF+ ML
Sbjct: 377 QLRKVCDHPYLMPGAEPEPYVNGEHLCLSSAKMIVMEKLVEKHLKNNGKILIFSQMTRML 436
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD-DVKAAVLSMKAGGVGLTLTAAS 558
D I + K + RIDG T R + +F + + V +LS ++GG+G+ L +A
Sbjct: 437 DIIDDYLVFKDIEHYRIDGQTQQEDRVEQIKDFNDPNGKVSIFLLSTRSGGLGINLQSAD 496
Query: 559 TVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
TVI + W P IQA DRAHRIGQ V VY L+ T + + V KL
Sbjct: 497 TVILYDSDWNPQSDIQAMDRAHRIGQTKPVTVYRLICEGTAEQRLIRVAERKL 549
>gi|428177642|gb|EKX46521.1| hypothetical protein GUITHDRAFT_70514 [Guillardia theta CCMP2712]
Length = 535
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 221/469 (47%), Gaps = 52/469 (11%)
Query: 176 PFQRDGVRFAL-QH--GGRILLADEMGLGKTIQAIAVATCFRDV----WPVLILTPSSLR 228
P+Q DG+++ + QH G +L DEMGLGKT+Q I++ + V P +++ P S+
Sbjct: 3 PYQLDGLKWLVNQHDTGAGGILGDEMGLGKTLQVISLLGFLKTVRGEDGPHIVIAPLSVM 62
Query: 229 LHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--SYDVV 286
+W I++W QL G KR + G F+++ +Y+++
Sbjct: 63 NNWVTEIKRWC-----------PQLRAVPFHGPQSERERIKREKLIYGKFDVMCTTYEML 111
Query: 287 LKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELF 346
+ ++ ++ DE+H +KN + + A + ++ + LL++GTP + EL+
Sbjct: 112 VADTYTCQRFHWGYIVLDEAHRIKNEKTQMGQAVRRL--RSSHRLLITGTPLQNNMHELW 169
Query: 347 KQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEEL---HNLMKATVMIRRLKKDVL 403
L LYP+V N + + N + L H L+ +M+RRLK DVL
Sbjct: 170 SLLNFLYPEVLSNADTFDKEWKSNSKPEENSSPLNEKLLSAAHALL-GPLMLRRLKSDVL 228
Query: 404 AQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK---------- 453
+ + + + ++ + V +M++ F +++ G+ + + + K
Sbjct: 229 SSMQIPPKTEIKILVPLTEMQR----FWYSKMLTGECASLAGSGQTDAYKRLNSLVMQLR 284
Query: 454 -------FTEKNLINKIYTDSAEAKIPA---VLDYLETVIEA-GCKFLIFAHHQPMLDAI 502
E+ +N +TD A + VLD L T ++ G K L+F+ MLD +
Sbjct: 285 KVCNHPYLFEEADVNSGWTDEAIVQASGKMIVLDKLLTKLQKEGRKVLVFSQFTSMLDVL 344
Query: 503 HQLFLKKKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAAVLSMKAGGVGLTLTAASTVI 561
++ +R+DG T A R+ + FQ K D ++S +AGG+G+ LTAA TV+
Sbjct: 345 GDFMHFRRYKFLRLDGSTSVARRRYEIACFQNPKSDYFVYLISTRAGGLGINLTAADTVV 404
Query: 562 FAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
+ W P QA+DRAHR GQ V+VY L++ TV+ + V +K
Sbjct: 405 LYDSDWNPSIDSQAQDRAHRFGQKKPVSVYRLISRHTVEQRILQVAENK 453
>gi|403297789|ref|XP_003939734.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Saimiri
boliviensis boliviensis]
Length = 2203
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 935 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 994
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 995 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 1051
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 1052 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 1109
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 1110 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 1159
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 1160 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 1216
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 1217 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1276
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1277 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1336
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1337 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1396
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1397 RFVTRASVEERITQVAKRKM 1416
>gi|331266037|ref|YP_004325667.1| superfamily II DNA/RNA helicase [Streptococcus oralis Uo5]
gi|326682709|emb|CBZ00326.1| Snf2 family protein, superfamily II DNA/RNA helicases [Streptococcus
oralis Uo5]
Length = 1031
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 226/481 (46%), Gaps = 54/481 (11%)
Query: 170 IESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FRDVWPVLILT 223
+++ L +Q GVR+ L H GG +LAD+MGLGKT+Q IA T + VLIL
Sbjct: 578 VQTSLRDYQEKGVRWLQMLHHYGFGG--ILADDMGLGKTLQTIAFLTNQVTEDSRVLILA 635
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
PS L +WA +++ P ++ VV +NR I+S N + + SY
Sbjct: 636 PSGLIYNWADEFRKF--APQLDLAVVHGL--KANREA--ILSENHQ--------IYVTSY 681
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
+ + F + DE+ +KNAQ K + + A +AL SGTP +
Sbjct: 682 ATFRQDSELYQEMAFDFLFLDEAQVMKNAQTKIAQSLRQFVVPAVFAL--SGTPIENHLG 739
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVL 403
EL+ + + P + + E+ + + +K VM RR K++VL
Sbjct: 740 ELWSIFQIVLPGLLPSKKEFMKLPA--------------DRVAQFIKPFVM-RRKKEEVL 784
Query: 404 AQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE------EVQSLKFTEK 457
+LP + V+ + E + IY +L+ ++ ++ +E E+ S +
Sbjct: 785 TELP-DLIEVVYKNELEDQQKAIY--LAQLQQMRDRLAQVTDQEFQRSRVEILSGLMRLR 841
Query: 458 NLINK--IYTD---SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
+ + ++ D A K+ ++ D L V G + LIF+ + ML+ I Q +
Sbjct: 842 QICDTPALFMDDYQGASGKLDSLRDLLLQVAAGGHRVLIFSQFKGMLEKIEQELPDLGLT 901
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
+I G TP RQ + F + + A ++S+KAGGVGL LT A TVI +L W P
Sbjct: 902 SFKITGSTPAHDRQEMTKAFNQGER-DAFLISLKAGGVGLNLTGADTVILVDLWWNPAVE 960
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
QA RAHR+GQ V VY L+ T+++ + ++ K + QVLDG E+ +S ++I
Sbjct: 961 AQAIGRAHRMGQEQKVEVYRLITKGTIEEKIQELQEQKKHLVSQVLDGTESRASLSLAEI 1020
Query: 633 R 633
R
Sbjct: 1021 R 1021
>gi|134117101|ref|XP_772777.1| hypothetical protein CNBK1510 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255395|gb|EAL18130.1| hypothetical protein CNBK1510 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1409
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 220/461 (47%), Gaps = 50/461 (10%)
Query: 193 LLADEMGLGKTIQAIAVATCF----RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
+LADEMGLGKTIQ I++ T + P L++ P S +W ++W P+ +
Sbjct: 567 ILADEMGLGKTIQTISLITYLIEKKKQPGPFLVIVPLSTLTNWTMEFERWA---PAVRTL 623
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHF 308
+L R + + + +D + +Y+ ++K + +L + +I DE H
Sbjct: 624 ILKGSPAVRREAYPRLRA-------IDFQVCLTTYEYIIKERPLLSRIKWIHMIIDEGHR 676
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
+KN ++K + TL ++Y L+L+GTP + EL+ L + P ++ +V + +
Sbjct: 677 MKNVKSK-LSQTLNEYYSSRYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWF- 734
Query: 369 KGGVFGIYQGAS---NHEE-------LHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDV 418
F G N EE LH +++ ++RRLKKDV ++LP K + ++ +
Sbjct: 735 -NAPFANTGGEKMEMNEEEALLVVKRLHKVLRP-FLLRRLKKDVESELPDKVEKVIYTKM 792
Query: 419 AEKDMRQIYALFRELEVVKGKIKACKSE--EEVQSLKFTEKNLINKIY------------ 464
+ + +Y ++ + + + K + + +Q+ + + N Y
Sbjct: 793 SALQWK-LYESVQKYKTLPTDMSVAKPQKRQNLQNALMQLRKICNHPYVFREVDEDFTVG 851
Query: 465 --TDSAEAKIPAVLDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDG 518
TD ++ + L+ ++ + G K LIF ++ + F + R+DG
Sbjct: 852 NTTDEQIIRVAGKFELLDRILPKLFKTGHKVLIFFQMTEIMTIVSDFFDFRGWKYCRLDG 911
Query: 519 GTPPASRQALVTEFQEKDD-VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
T RQ L++ F + + + +LS +AGG+GL L +A TVI + W P +QA+D
Sbjct: 912 STKAEDRQTLLSTFNDPNSPYQVFILSTRAGGLGLNLQSADTVIIYDTDWNPHADLQAQD 971
Query: 578 RAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
RAHRIGQ V V L+++ TV+++V + KLE G+V+
Sbjct: 972 RAHRIGQKKEVRVLRLISSGTVEELVLARAQRKLEIDGKVI 1012
>gi|414158803|ref|ZP_11415095.1| hypothetical protein HMPREF9188_01369 [Streptococcus sp. F0441]
gi|410868786|gb|EKS16750.1| hypothetical protein HMPREF9188_01369 [Streptococcus sp. F0441]
Length = 1031
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 141/482 (29%), Positives = 228/482 (47%), Gaps = 56/482 (11%)
Query: 170 IESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FRDVWPVLILT 223
+++ L +Q GVR+ L H GG +LAD+MGLGKT+Q IA T + VLIL
Sbjct: 578 VQASLRDYQEKGVRWLQMLHHYGFGG--ILADDMGLGKTLQTIAFLTSQVTEDSRVLILA 635
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
PS L +WA +++ P ++ VV +NR I+S N + + SY
Sbjct: 636 PSGLIYNWADEFRKF--APQLDLAVVHGL--KANREA--ILSENHQ--------IYVTSY 681
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
+ + F + DE+ +KNAQ K + + A +AL SGTP +
Sbjct: 682 ATFRQDSELYQEMAFDFLFLDEAQVMKNAQTKIAQSLRQFVVPAVFAL--SGTPIENHLG 739
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVL 403
EL+ + + P + + E+ + + +K VM RR K++VL
Sbjct: 740 ELWSIFQIVLPGLLPSKKEFMKLPA--------------DRVAQFIKPFVM-RRKKEEVL 784
Query: 404 AQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE------EVQSLKFTEK 457
+LP + V+ + E + IY +L+ ++ ++ +E E+ S +
Sbjct: 785 TELP-DLIEVVYKNELEDQQKAIY--LAQLQQIRDRLAQVTDQEFQRSRVEILSGLMRLR 841
Query: 458 NLINK--IYTD---SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
+ + ++ D A K+ ++ D L V + G + LIF+ + ML+ I Q +
Sbjct: 842 QICDTPALFMDDYQGASGKLDSLRDLLLQVADGGHRVLIFSQFKGMLEKIEQELPNLGLT 901
Query: 513 CIRIDGGTPPASRQALVTEF-QEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
+I G TP RQ + F Q + D+ ++S+KAGGVGL LT A TVI +L W P
Sbjct: 902 SFKITGSTPAQDRQEMTKIFNQGERDI--FLISLKAGGVGLNLTGADTVILVDLWWNPAV 959
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ 631
QA RAHR+GQ V VY L+ T+++ + ++ K + QVLDG E+ +S ++
Sbjct: 960 EAQAIGRAHRMGQERKVEVYRLITRGTIEEKIQELQEQKRHLVSQVLDGTESRASLSLAE 1019
Query: 632 IR 633
IR
Sbjct: 1020 IR 1021
>gi|395841073|ref|XP_003793373.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Otolemur
garnettii]
Length = 2088
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 823 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 882
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 883 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 939
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 940 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 997
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 998 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 1047
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 1048 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 1104
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 1105 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1164
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1165 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1224
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1225 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1284
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1285 RFVTRASVEERITQVAKRKM 1304
>gi|359074223|ref|XP_002694217.2| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Bos taurus]
Length = 2042
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 773 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 832
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 833 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 889
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 890 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 947
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 948 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 997
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 998 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 1054
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 1055 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1114
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1115 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1174
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1175 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1234
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1235 RFVTRASVEERITQVAKRKM 1254
>gi|355705138|gb|EHH31063.1| Putative global transcription activator SNF2L1, partial [Macaca
mulatta]
Length = 996
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 231/481 (48%), Gaps = 61/481 (12%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 141 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 197
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 198 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 250
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 251 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 308
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 309 DFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 363
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 364 MQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 421
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 422 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 481
Query: 524 SRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWTPG 570
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W P
Sbjct: 482 EREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 541
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENS 624
+QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D N
Sbjct: 542 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 601
Query: 625 L 625
L
Sbjct: 602 L 602
>gi|440894888|gb|ELR47213.1| Putative global transcription activator SNF2L1, partial [Bos
grunniens mutus]
Length = 996
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 234/483 (48%), Gaps = 65/483 (13%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 141 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 197
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 198 PSLRVICF--VGDKDARAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 248
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 249 YLVIDEAHRIKNEKSKLSEIVRDF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 306
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 307 AEDFDSWFDTKNCLGDQKLV---ERLHTVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 362
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 363 -KMQREWYTKILMKDIDVLNSAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 419
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 420 DEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTP 479
Query: 522 PASRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWT 568
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W
Sbjct: 480 HEEREDKFLEVELLGQREAIEAFNIPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWN 539
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHE 622
P +QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D
Sbjct: 540 PQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQS 599
Query: 623 NSL 625
N +
Sbjct: 600 NKM 602
>gi|12654665|gb|AAH01171.1| Unknown (protein for IMAGE:3355762), partial [Homo sapiens]
Length = 896
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 232/480 (48%), Gaps = 52/480 (10%)
Query: 174 LLPFQRDGV-----RFALQHGGRILLADEMGLGKTIQAIAV----ATCFRDVWPVLILTP 224
L +Q +GV RF Q+G +L DEMGLGKT Q IA+ A D P LIL P
Sbjct: 45 LRSYQLEGVNWLAQRFHCQNG--CILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCP 102
Query: 225 SSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--S 282
S+ +W +Q++ P V +G + ++++ + F+++ +
Sbjct: 103 LSVLSNWKEEMQRF--APGLSCVTY---------AGDKEERACLQQDLKQESRFHVLLTT 151
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQA--KRTAATLPIIKKAQYALLLSGTPALS 340
Y++ LK + L S + +++ DE+H LKN + +T + ++ ++LLL+GTP +
Sbjct: 152 YEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVV----FSLLLTGTPIQN 207
Query: 341 RPIELFKQLEALYPDVY--KNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRL 398
EL+ L + PD++ + V ++ RY I + + + ELH L++ ++RR+
Sbjct: 208 SLQELYSLLSFVEPDLFSKEEVGDFIQRYQD-----IEKESESASELHKLLQP-FLLRRV 261
Query: 399 KKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFRELEVVKGKI-KACKSEEEVQSLK--F 454
K +V +LP K ++ ++ + A L ++L+ + + K K + + L+
Sbjct: 262 KAEVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILSQLRKCV 321
Query: 455 TEKNLINKI---------YTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQL 505
L + + + A K+ + L + G + L+F+ MLD +
Sbjct: 322 DHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDY 381
Query: 506 FLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAEL 565
+ R+DG R + F ++ + +LS +AGGVG+ LTAA TVIF +
Sbjct: 382 MDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IFVFLLSTRAGGVGMNLTAADTVIFVDS 440
Query: 566 SWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSL 625
+ P + +QA RAHRIGQ SV V L+ DTV++IV+ SKL+ +++G +L
Sbjct: 441 DFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGGHFTL 500
>gi|380486064|emb|CCF38946.1| SNF2 super family protein [Colletotrichum higginsianum]
Length = 1119
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 234/501 (46%), Gaps = 47/501 (9%)
Query: 137 VEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFAL---QHGGRIL 193
E E L+Q SA RE PA I+ ++ +Q G+ + + ++G +
Sbjct: 149 TEAEEDAELLQDEKHGGSAETVFRES----PAFIQGQMRDYQVAGLNWLISLHENGISGI 204
Query: 194 LADEMGLGKTIQAIAVATCFRDVW----PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVV 249
LADEMGLGKT+Q IA R + P +++ P S +W ++W E+ V+
Sbjct: 205 LADEMGLGKTLQTIAFLGYLRHIMGITGPHIVIVPKSTLDNWKREFEKWT----PEVHVL 260
Query: 250 LSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFL 309
+ Q R+ R + D I SY++VL+ + L ++ +I DE+H +
Sbjct: 261 VLQGAKEERNALI-----NDRLVNEDFDVCITSYEMVLREKGHLKKFAWEYIIIDEAHRI 315
Query: 310 KNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCK 369
KN ++ + A + + ++ LL++GTP + EL+ L L PDV+ + + +
Sbjct: 316 KNEES--SLAQVIRVFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFS- 372
Query: 370 GGVFGIYQGASNH-EELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA 428
G Q ++LH +++ ++RR+K DV L K+ V+L ++E ++
Sbjct: 373 ----GREQDQDTVVQQLHRVLRP-FLLRRVKSDVEKSLLPKKEVNVYLGMSEMQIKWYQK 427
Query: 429 LF-RELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIP------------- 473
+ ++++ V G +S+ + ++ + N Y + AE P
Sbjct: 428 ILEKDIDAVNGANGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIYNAGK 487
Query: 474 -AVLDYLETVI-EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTE 531
VLD L T + + G + LIF+ +LD + + ++ RIDGG R A + E
Sbjct: 488 MVVLDKLLTRMRKQGSRVLIFSQMSRLLDILEDYCVFREYKYCRIDGGXAHEDRIAAIDE 547
Query: 532 FQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNV 590
+ + K +L+ +AGG+G+ LT A V+ + W P +QA DRAHRIGQ V V
Sbjct: 548 YNKPGSEKFIFLLTTRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVV 607
Query: 591 YYLLANDTVDDIVWDVVRSKL 611
Y + ++ +++ V + KL
Sbjct: 608 YRFVTDNAIEEKVLERAAQKL 628
>gi|380818206|gb|AFE80977.1| chromodomain-helicase-DNA-binding protein 1-like [Macaca mulatta]
gi|383423055|gb|AFH34741.1| chromodomain-helicase-DNA-binding protein 1-like [Macaca mulatta]
Length = 900
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 139/486 (28%), Positives = 235/486 (48%), Gaps = 64/486 (13%)
Query: 174 LLPFQRDGV-----RFALQHGGRILLADEMGLGKTIQAIAV----ATCFRDVWPVLILTP 224
L +Q +GV RF Q+G +L DEMGLGKT Q IA+ A D P LIL P
Sbjct: 48 LRSYQLEGVNWLAQRFHCQNG--CILGDEMGLGKTCQTIALLIYLAGRLNDEGPFLILCP 105
Query: 225 SSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--S 282
S+ +W +Q++ PS V + G + ++++ + F+++ +
Sbjct: 106 LSVLSNWKEEMQRF---APSLSCVTYA--------GDKEERACLQQDLKQESHFHVLLTT 154
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQA--KRTAATLPIIKKAQYALLLSGTPALS 340
Y++ LK + L S + +++ DE+H LKN + +T + ++ ++LLL+GTP +
Sbjct: 155 YEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVV----FSLLLTGTPIQN 210
Query: 341 RPIELFKQLEALYPDVY--KNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRL 398
EL+ L + PD++ + V ++ RY I + + + ELH L++ ++RR+
Sbjct: 211 SLQELYSLLSFVEPDLFSKEEVGDFVQRYQD-----IEKESESASELHKLLQP-FLLRRV 264
Query: 399 KKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFRELEVVKGKI-KACKSEEEVQSLKFTE 456
K DV +LP K ++ ++ + A L ++L+ + + K K + + L+
Sbjct: 265 KADVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILSQLR--- 321
Query: 457 KNLINKIYTDSAEAKIPAVLDYLETVIEA-----------------GCKFLIFAHHQPML 499
K + + D E + V D+L IEA G + L+F+ ML
Sbjct: 322 KCVDHPYLFDGVEPEPFEVGDHL---IEASGKLYLLDKLLAFLYSGGHRVLLFSQMTQML 378
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
D + + R+DG R + F ++ + +LS +AGGVG+ LTAA T
Sbjct: 379 DILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IFVFLLSTRAGGVGMNLTAADT 437
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
VIF + + P + +QA RAHRIGQ SV V L+ DTV++IV SKL+ +++
Sbjct: 438 VIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVSRKAASKLQLTNMIIE 497
Query: 620 GHENSL 625
G +L
Sbjct: 498 GGHFTL 503
>gi|270284872|ref|ZP_06194266.1| SNF2 family helicase [Chlamydia muridarum Nigg]
gi|270288900|ref|ZP_06195202.1| SNF2 family helicase [Chlamydia muridarum Weiss]
Length = 1163
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 225/462 (48%), Gaps = 45/462 (9%)
Query: 162 KYDQIPAHIESKLLPFQRDGV----RFALQHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++ ++P+ I++ L +Q+DGV R H IL AD+MGLGKT+Q I T R
Sbjct: 687 EFQEVPSQIQATLRSYQKDGVHWLERLRKMHLNGIL-ADDMGLGKTLQTIIAVTQSRLEK 745
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
LI+ P+SL +W +++ P +V+ + R +SS + ++
Sbjct: 746 GGGCSLIICPTSLVYNWK---EEFRKFNPEFKTLVIDGIPSQRRKQ---LSSLEEYDVA- 798
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
I SY+++ K +I F V+ DE+H +KN + R A ++ +I+ A + L+L+
Sbjct: 799 -----ITSYNLLQKDIDIYKDFLFDYVVLDEAHHIKN-RTTRNAKSVKMIR-ACHRLILT 851
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQG--ASNHEELHNLMKAT 392
GTP + EL+ + L P + + + +Y + G Y G A N E L + A
Sbjct: 852 GTPIENSLEELWSLFDFLMPGLLSSYDRFVGKYIR---IGNYMGNKADNVEALRRKV-AP 907
Query: 393 VMIRRLKKDVLAQLP--VKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQ 450
++RR+K+DVL LP + L +++++ Q YA E+ ++ + E +
Sbjct: 908 FILRRMKEDVLEDLPPVSEILYHCHLTESQRELYQSYAASARQEL--SRLVKQEGFERIH 965
Query: 451 SLKFTEKNLINKIYTDSA-----------EAKIPAVLDYLETVIEAGCKFLIFAHHQPML 499
+ +I A AK ++D L +++++G K ++F+ + ML
Sbjct: 966 IHVLATLTRLKQICCHPAIFAKDTPEPGDSAKYDMLMDLLGSLVDSGHKTVVFSQYTKML 1025
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
I Q K V + +DG T +R +V +F E + ++S+KAGG GL L A T
Sbjct: 1026 GIIKQDLEAKGVPFVYLDGST--KNRLEIVQQFNEDPSLLVFLVSLKAGGTGLNLVGADT 1083
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDD 601
VI ++ W P QA DR HRIGQ SV+ Y L+ +T+++
Sbjct: 1084 VIHYDMWWNPAVENQATDRVHRIGQSRSVSSYKLVTLNTIEE 1125
>gi|406576826|ref|ZP_11052450.1| superfamily II DNA/RNA helicase [Streptococcus sp. GMD6S]
gi|404460629|gb|EKA06877.1| superfamily II DNA/RNA helicase [Streptococcus sp. GMD6S]
Length = 1031
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 226/481 (46%), Gaps = 54/481 (11%)
Query: 170 IESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FRDVWPVLILT 223
+++ L +Q VR+ L H GG +LAD+MGLGKT+Q IA T + VLIL
Sbjct: 578 VQASLRDYQEKSVRWLQMLHHYGFGG--ILADDMGLGKTLQTIAFLTSQVTEDGRVLILA 635
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
PS L +WA +++ P ++ VV +NR I+S N + + SY
Sbjct: 636 PSGLIYNWADEFRKF--APQLDLAVVHGL--KANREA--ILSENHQ--------IYVTSY 681
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
+ + F + DE+ +KNAQ K + + A +AL SGTP +
Sbjct: 682 ATFRQDSELYQEMAFDFLFLDEAQVMKNAQTKIAQSLRQFVVPAVFAL--SGTPIENHLG 739
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVL 403
EL+ + + P + + E+ + + +K VM RR K++VL
Sbjct: 740 ELWSIFQIVLPGLLPSKKEFMKLPA--------------DRVAQFIKPFVM-RRKKEEVL 784
Query: 404 AQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE------EVQSLKFTEK 457
+LP + V+ + E + IY +L+ ++ ++ +E E+ S +
Sbjct: 785 TELP-DLIEVVYKNELEDQQKAIY--LAQLQQMRDRLAQVTDQEFQRSRVEILSGLMRLR 841
Query: 458 NLINK--IYTD---SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
+ + ++ D A K+ ++ D L V + G + LIF+ + ML+ I Q +
Sbjct: 842 QICDTPALFMDDYQGASGKLDSLRDLLLQVADGGHRVLIFSQFKGMLEKIEQELPDLGLT 901
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
+I G TP RQ + F + + A ++S+KAGGVGL LT A TVI +L W P
Sbjct: 902 SFKITGSTPAQDRQEMTKAFNQGER-DAFLISLKAGGVGLNLTGADTVILVDLWWNPAVE 960
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
QA RAHR+GQ V VY L+ T+++ + ++ K + QVLDG E+ +S ++I
Sbjct: 961 AQAIGRAHRMGQEQKVEVYRLITKGTIEEKIQELQEQKKHLVSQVLDGTESRASLSLAEI 1020
Query: 633 R 633
R
Sbjct: 1021 R 1021
>gi|304315749|ref|YP_003850894.1| SNF2-like protein [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302777251|gb|ADL67810.1| SNF2-related protein [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 1065
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 136/486 (27%), Positives = 230/486 (47%), Gaps = 60/486 (12%)
Query: 165 QIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATCFRDVW-- 217
++P + L +Q G ++ + GG +LAD+MGLGKTIQ IA ++
Sbjct: 595 EVPKKLNGVLRKYQEVGFKWLKTLSSYGFGG--ILADDMGLGKTIQTIAFLLDEKEKHKE 652
Query: 218 PVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGL 277
P +++ P++L +W + IQ++ P+ +V+S GS +++ S + ++
Sbjct: 653 PAIVICPTTLIYNWESEIQRF---APTLKTLVVS---GSKSERGSLIKSIEESDVV---- 702
Query: 278 FNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
I SY ++ + + F I DE+ +KN +++ + I K +AL +GTP
Sbjct: 703 --ITSYPLIRRDIESYENIEFSYCILDEAQHIKNPKSQNAESVKRIKAKGYFAL--TGTP 758
Query: 338 ALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT--VMI 395
+ EL+ + L P + ++ +Y K V N E L++L K ++
Sbjct: 759 IENSLTELWSIFDFLMPGYLLSHRKFVEKYEKPIV-----RYKNEEALNDLSKHIRPFIL 813
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLKKDVL +LP K F ++ K+ +++Y + LE K +I EEE+++ F
Sbjct: 814 RRLKKDVLKELPNKIETTSFAELT-KEQKELYMAY--LENAKTEI-----EEEIRNKGFE 865
Query: 456 EKNLINKIYT-------------------DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQ 496
+ KI T K+ +++ ++ + E+G + LIF+
Sbjct: 866 RSQI--KIITALTRLRQICCHPSMFVENYKGTSGKMELLMELIQELKESGHRALIFSQFT 923
Query: 497 PMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTA 556
L I K+K+ + +DG T R LV F E D ++S+KAGG GL L
Sbjct: 924 TALKLIEDNLKKEKISYLYLDGDTKTKERGELVKAFNEGDS-DVFLISLKAGGTGLNLVG 982
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A TVI + W P QA DRAHRIGQV++V V L+ T+++ + + K E +
Sbjct: 983 ADTVIHFDPWWNPAIEDQATDRAHRIGQVNTVQVIKLITQGTIEEKIVKLQERKKEMINS 1042
Query: 617 VLDGHE 622
V++ E
Sbjct: 1043 VINPGE 1048
>gi|170593189|ref|XP_001901347.1| DNA excision repair protein ERCC-6 [Brugia malayi]
gi|158591414|gb|EDP30027.1| DNA excision repair protein ERCC-6, putative [Brugia malayi]
Length = 1103
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 132/489 (26%), Positives = 228/489 (46%), Gaps = 61/489 (12%)
Query: 165 QIPAHIESKLLPFQRDGVRFALQ-H----GGRILLADEMGLGKTIQAIAVA-----TCFR 214
+IP KL +Q+ GVR+ + H GG +LADEMGLGKT+Q I+ +C
Sbjct: 222 KIPKDCWEKLYKYQKTGVRWLNELHNQCVGG--ILADEMGLGKTVQVISFLRGLAFSCLE 279
Query: 215 D-------VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSN 267
D + PVLI+ P++L W + W P + ++ + GS F S+
Sbjct: 280 DRGFSFSGLGPVLIICPTTLIRQWLKEFRTWF--PLCRVAIL--HISGS----FHGQSAQ 331
Query: 268 TKRNIPL---DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPII 324
R + + DG + SY K + L+ + +I DE H ++N A+ T A I
Sbjct: 332 LIRKMVVSQSDGSVLLTSYGTFAKNRKHLIDKVWHYIILDEGHKIRNPDAQITLAVKEI- 390
Query: 325 KKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE 384
+ + L+LSG+P + EL+ ++ +YP + + +++ G Y A+ +
Sbjct: 391 -RTPHRLILSGSPLQNSLRELWSLIDFVYPGRLGALKSFMDKFSIPITQGGYANATAVQV 449
Query: 385 LHNLMKATVM--------IRRLKKDVLA--QLPVKRRQQVFLDV--AEKDMRQIYALFRE 432
A ++ +RRLKKDV LP K Q +F ++ ++ + + Y RE
Sbjct: 450 RTAYKCACILRDAINPYLLRRLKKDVEMSIHLPTKTEQVLFCNITPCQRKLYEEYLSSRE 509
Query: 433 LE-VVKGKIKA----------CKSEEEVQS--LKFTEKNLINK----IYTDSAEAKIPAV 475
+ ++ GK+ A C + V KF + ++ K+ +
Sbjct: 510 CDRILSGKMDAFVGLITLRKLCNHPDLVTGGPNKFNDYDVTADEEMGFGAPCRSGKMQVL 569
Query: 476 LDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEK 535
L+ G K L+F+ + ML + + ++++ +R+DG T SRQ LV EF +
Sbjct: 570 KALLKLWKRQGQKVLLFSQSRQMLTILEKFVIQERYEYLRMDGTTVVRSRQLLVEEFNKN 629
Query: 536 DDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLA 595
+ + +L+ + GG+G+ LT A+ V+ + W P IQA +RA RIGQ +V +Y LL
Sbjct: 630 NKIFIFLLTTRVGGLGINLTGANRVVIFDPDWNPSTDIQARERAWRIGQERAVTIYRLLT 689
Query: 596 NDTVDDIVW 604
T+++ ++
Sbjct: 690 GGTIEEKIY 698
>gi|355757682|gb|EHH61207.1| Putative global transcription activator SNF2L1, partial [Macaca
fascicularis]
Length = 995
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 231/481 (48%), Gaps = 61/481 (12%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 140 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 196
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 197 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 249
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 250 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 307
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 308 DFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 362
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 363 MQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 420
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 421 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 480
Query: 524 SRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWTPG 570
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W P
Sbjct: 481 EREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 540
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENS 624
+QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D N
Sbjct: 541 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 600
Query: 625 L 625
L
Sbjct: 601 L 601
>gi|189521245|ref|XP_696641.3| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Danio rerio]
Length = 2063
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 139/498 (27%), Positives = 218/498 (43%), Gaps = 64/498 (12%)
Query: 162 KYDQIPAHIE---SKLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
KY++ P + L +Q +G+ RF+ G +LADEMGLGKTIQ I + + F+
Sbjct: 736 KYEEQPEFVTETGGTLHLYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLFK 795
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN----RSGFTIVSSN 267
+ P L+ P S ++W + W P VV + S + FT +
Sbjct: 796 EGHTKGPFLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKDSRAIIRENEFTFDDTA 852
Query: 268 TK---------RNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK--R 316
K R P+ + SY++V QN+L S ++ ++ DE+H LKN Q+K R
Sbjct: 853 VKGGKKAFKLRREAPIKFHVLLTSYELVTIDQNVLKSIDWACLVVDEAHRLKNNQSKFFR 912
Query: 317 TAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIY 376
I + LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 913 RLNDYKI----DHKLLLTGTPLQNNLEELFHLLNFLTPNRFNNLEGFLEE------FADI 962
Query: 377 QGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---REL 433
++LH+L+ M+RRLK DV +P K ++ + V M++ Y F R
Sbjct: 963 SKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAK--TELIVRVELSPMQKKYYKFILTRNF 1019
Query: 434 EVVKGK--------------IKACKSEEEVQSLKFTE-----KNLINKIYTDSAEAKIPA 474
E + K +K C + + + E + A K+
Sbjct: 1020 EALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAAEAPKTPSGAYEGVGLTKASGKLML 1079
Query: 475 VLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE 534
+ L + E G + L+F+ MLD + + RIDGG A RQ + F
Sbjct: 1080 LQKMLRKLKEQGHRVLVFSQMTKMLDLLEDFLDSEGYKYERIDGGITGALRQEAIDRFNA 1139
Query: 535 KDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYL 593
V+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ + V +Y
Sbjct: 1140 PGAVQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRF 1199
Query: 594 LANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1200 VTRASVEERITQVAKRKM 1217
>gi|189440776|ref|YP_001955857.1| superfamily II DNA/RNA helicase [Bifidobacterium longum DJO10A]
gi|189429211|gb|ACD99359.1| Superfamily II DNA/RNA helicase [Bifidobacterium longum DJO10A]
Length = 1394
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 149/524 (28%), Positives = 239/524 (45%), Gaps = 64/524 (12%)
Query: 165 QIPAHIESKLLPFQRDGVRFA---LQHGGRILLADEMGLGKTIQAIAV--------ATCF 213
++P ++ L P+Q +G ++ G +LADEMGLGK++Q IA+ A
Sbjct: 879 EVPDSLKHILRPYQVEGFQWLNTLCDKGFGGILADEMGLGKSVQLIALLLSRYQRNAGEM 938
Query: 214 RD--VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRN 271
D + P LI+ P+SL +W A ++ PS VV++ R T + + +
Sbjct: 939 GDGSLGPSLIVCPASLVYNWGA---EFTKFAPSFNAVVVAGTKAERR---TAIGRAFRAD 992
Query: 272 IPLDGLFNIISYDVVLKLQNILMSS--NFKIVIADESHFLKNAQAKRTAATLPIIKKAQY 329
P I SYD++ + + ++ F ++ DE+ ++KN K A + ++
Sbjct: 993 EPT---VLITSYDLLRRDVDDYTANEQRFNVMALDEAQYIKNHTTKIAKAVKAVAADHRF 1049
Query: 330 ALLLSGTPALSRPIELFKQLEALYPDV---YKNVHE-----YGNRYCKGGVFGIYQGASN 381
AL +GTP +R EL+ + L P + YK HE N G + A+
Sbjct: 1050 AL--TGTPIENRLSELWSIFDFLMPGLLGSYKRFHERYELPISNARAADGSTAEGRAAAQ 1107
Query: 382 --------HEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFR-- 431
+L +L+ + RRLK VL LP K + + +A + R++YA
Sbjct: 1108 VNPEAARVSRQLQSLV-GVFIKRRLKSQVLTDLPDKLETTLTVRLA-GEQRKLYAAHEQR 1165
Query: 432 ---------ELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAE--AKIPAVLDYLE 480
E + KI+ +++ + + L Y D+ + AK+ A+ + +E
Sbjct: 1166 LRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLL----YADAKDQSAKLAAITELVE 1221
Query: 481 TVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKA 540
T + G K LIF+ LD I + F + + I G TP R LV +F DD A
Sbjct: 1222 TCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVDQFN-ADDTPA 1280
Query: 541 AVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
++S+KAG GL LT AS VI A+ W QA DRAHRIGQ VNVY ++A DT++
Sbjct: 1281 FLISLKAGNTGLNLTGASVVIHADPWWNAAAQDQATDRAHRIGQTEDVNVYQVVAKDTIE 1340
Query: 601 DIVWDVVRSKLENLGQVLDGH--ENSLEVSSSQIRSSPAKQKTL 642
+ + ++ +K E Q D + +S + +PA TL
Sbjct: 1341 ERILELQHTKSELARQFTDASLLADEAGTGASALTEAPASIATL 1384
>gi|395526186|ref|XP_003765249.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Sarcophilus
harrisii]
Length = 2043
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I++ L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 687 KFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVYLYSLYK 746
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 747 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 803
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 804 IRSGKKVFRMKKEAQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 861
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 862 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 911
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 912 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 968
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 969 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1028
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1029 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1088
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1089 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1148
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1149 RFVTRASVEERITQVAKRKM 1168
>gi|315224242|ref|ZP_07866081.1| Snf2 family helicase [Capnocytophaga ochracea F0287]
gi|420158347|ref|ZP_14665165.1| SNF2 family N-terminal domain protein [Capnocytophaga ochracea str.
Holt 25]
gi|314945790|gb|EFS97800.1| Snf2 family helicase [Capnocytophaga ochracea F0287]
gi|394763696|gb|EJF45766.1| SNF2 family N-terminal domain protein [Capnocytophaga ochracea str.
Holt 25]
Length = 950
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 231/500 (46%), Gaps = 65/500 (13%)
Query: 158 DLREKYDQIPA-HIESKLLPFQRDGVRFALQH---GGRILLADEMGLGKTIQAIAVATCF 213
+L EK P+ ++ + L P+Q +GV + LQH G LAD+MGLGKT+Q IA+
Sbjct: 461 NLVEKVSYTPSPNLRATLRPYQIEGVEWLLQHYYNGVGACLADDMGLGKTLQTIALLVAI 520
Query: 214 RDVWP---------------------VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQ 252
D P VL++ PSSL +W +++ P +Q
Sbjct: 521 HDALPEKAIETADLFSGIEKSKEALKVLVILPSSLIFNWYDETKRF---APH---FKCTQ 574
Query: 253 LGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA 312
G++R KR D +F SY +V + + F+ +I DES +KN
Sbjct: 575 YVGTDRK------VKAKRLGNYDVVFT--SYPIVERDVELFQKYEFRYIILDESQRIKNK 626
Query: 313 QAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV 372
+K A + KA + + LSGTP + +L+ Q++ + P++ K+ Y + Y V
Sbjct: 627 NSKTFKAIHTL--KATHRIALSGTPIENSLSDLWSQMQFINPNILKS---YASFYKNYEV 681
Query: 373 -FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFR 431
+ EEL ++ + ++RR K+ VL LP Q ++ ++E A +
Sbjct: 682 EISKKKNTQALEELKTII-SPFLLRRTKEQVLDDLPEMEEQIIYCPMSE-------AQHK 733
Query: 432 ELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDS-------AEAKIPA-----VLDYL 479
E K K++ + +F N++ ++ S E+KI + V++Y+
Sbjct: 734 WYETEKSKVRNQLLQINEPITEFNTLNMLMRLRKISLHPKLVDKESKITSGKYEEVINYM 793
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
E ++++ K LIF+ L + KK + ++ G TP R+ V FQ +
Sbjct: 794 EELLQSSRKALIFSSFVSHLALYEEWCNKKGIKYAKLTGETPSFERKNQVEMFQNNPTIS 853
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+S+KAG VGL LT AS V+ + W P QA RAHRIGQ + VNV ++ DT+
Sbjct: 854 FFFISLKAGEVGLNLTQASYVLLLDPWWNPFSEKQAIGRAHRIGQQNKVNVIRFVSKDTI 913
Query: 600 DDIVWDVVRSKLENLGQVLD 619
++ + + +SK E ++D
Sbjct: 914 EEKIIKLQKSKRELSENIID 933
>gi|292496|gb|AAA80559.1| transcription activator [Homo sapiens]
Length = 976
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 234/483 (48%), Gaps = 65/483 (13%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 121 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 177
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 178 PSLRVICF--VGDKDARAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 228
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 229 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 286
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 287 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 342
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 343 -KMQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 399
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 400 DEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTP 459
Query: 522 PASRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWT 568
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W
Sbjct: 460 HEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWN 519
Query: 569 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHE 622
P +QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D
Sbjct: 520 PQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQRS 579
Query: 623 NSL 625
N L
Sbjct: 580 NKL 582
>gi|402552310|ref|YP_006601027.1| SNF2 family helicase [Mycoplasma genitalium M2288]
gi|401801005|gb|AFQ04319.1| SNF2 family helicase [Mycoplasma genitalium M2288]
Length = 1031
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 223/463 (48%), Gaps = 43/463 (9%)
Query: 172 SKLLPFQRDGVRF--AL---QHGGRILLADEMGLGKTIQAI-AVATCF---RDVWPVLIL 222
+ L +Q++GV++ AL Q GG +LADEMGLGKT Q I A+ + + + P LI+
Sbjct: 576 NNLRKYQKEGVKWIRALEDNQFGG--ILADEMGLGKTAQVIFAMLDSYQSTKSLLPSLII 633
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+SL L+W + Q++ P +IV N + + + K I L FN++
Sbjct: 634 VPASLLLNWKSEFQKF--APHVKIVT-----ANGNFKERSQIYESLKNQILLMS-FNVLR 685
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
D+ + F V+ DE+ +KN + T A I K + L L+GTP +R
Sbjct: 686 SDI-----KWISQKKFHYVVIDEAQGIKNENSTVTKAAKKI--KGNFCLALTGTPIENRL 738
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT--VMIRRLKK 400
++L+ + + P+ N ++ +++ + N E LMK T ++RR K
Sbjct: 739 LDLWSCFDFVLPNFLGNKKQFSDQF---------EKEKNDESFQKLMKKTSPFILRRTKN 789
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLI 460
VL +LP K ++++++E + +++Y + + + K K+ + SL +++
Sbjct: 790 KVLKELPKKIITDIYVELSE-EHQKLYDKQKTDGLKEIKESDAKNALNILSLILKLRHIC 848
Query: 461 -----NKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
N + +K L+ + +E K ++F ++D Q +K+ +
Sbjct: 849 SLVKDNDVNDFEDNSKANTALNIIYEALENKRKVILFTQFLDVIDCFKQTLKNQKIDHLV 908
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
DG +R ++ +F + + S+KAGGVG+ LTAA VI ++ W QA
Sbjct: 909 FDGRKTVKNRNTIIQKFNSAKEPCVMLASLKAGGVGINLTAAEVVIHFDVWWNSAVENQA 968
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
DRAHRIGQ +V VY ++A +T+++ V V K E + + L
Sbjct: 969 TDRAHRIGQSKTVQVYRIIAKNTIEERVCQVQNQKQELVKKTL 1011
>gi|366989549|ref|XP_003674542.1| hypothetical protein NCAS_0B00810 [Naumovozyma castellii CBS 4309]
gi|342300406|emb|CCC68165.1| hypothetical protein NCAS_0B00810 [Naumovozyma castellii CBS 4309]
Length = 1060
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 222/481 (46%), Gaps = 60/481 (12%)
Query: 167 PAHIES-KLLPFQRDGVRFALQ-HGGRI--LLADEMGLGKTIQAIAVATCFRDV----WP 218
PA I+ KL +Q G+ + + H ++ +LADEMGLGKT+Q I+ R V P
Sbjct: 129 PAFIKGGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKKIDGP 188
Query: 219 VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
LI+ P S +W +W P +V L G I+ +I L+ F
Sbjct: 189 FLIVVPKSTLDNWRREFNKW--TPEVNAIV----LHGDKEERHKILY-----DIVLEAKF 237
Query: 279 NII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
+++ SY++V+K +N+L ++ ++ DE+H +KN Q++ + K + LL++GT
Sbjct: 238 DVLITSYEMVIKEKNVLKKFAWQYIVIDEAHRIKNEQSQLSQIIRLFYSKNR--LLITGT 295
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE--------LHNL 388
P + EL+ L L PDV+ + G+F + +N E+ LH +
Sbjct: 296 PLQNNLHELWALLNFLLPDVFGD----------SGIFDEWFEQNNSEQDQEIVVQQLHTV 345
Query: 389 MKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF-RELEVVKGKIKACKSEE 447
+ ++RR+K DV L K V++ + E ++ +L ++++ V G + + +
Sbjct: 346 LNP-FLLRRIKADVEKSLLPKIETNVYVGMTEMQVKWYKSLLEKDIDAVNGAVGKREGKT 404
Query: 448 EVQSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLI 491
+ ++ + N Y + AE P D L+ + E G + LI
Sbjct: 405 RLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNAGKMIVLDKLLKRLKEKGSRVLI 464
Query: 492 FAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGV 550
F+ +LD + + RIDG T R + E+ + + K +L+ +AGG+
Sbjct: 465 FSQMSRLLDILEDYCFFRGYEYCRIDGSTAHEDRIEAIDEYNKPNSDKFVFLLTTRAGGL 524
Query: 551 GLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSK 610
G+ L A TVI + W P +QA DRAHRIGQ V VY + + +++ V + K
Sbjct: 525 GINLVTADTVILYDSDWNPQADLQAMDRAHRIGQKKQVTVYRFVTENAIEEKVIERAAQK 584
Query: 611 L 611
L
Sbjct: 585 L 585
>gi|321263831|ref|XP_003196633.1| chromatin structure remodeling complex protein STH1 [Cryptococcus
gattii WM276]
gi|317463110|gb|ADV24846.1| Chromatin structure remodeling complex protein STH1, putative
[Cryptococcus gattii WM276]
Length = 1430
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 220/461 (47%), Gaps = 50/461 (10%)
Query: 193 LLADEMGLGKTIQAIAVATCF----RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
+LADEMGLGKTIQ I++ T + P L++ P S +W ++W P+ +
Sbjct: 588 ILADEMGLGKTIQTISLITYLIEKKKQPGPFLVIVPLSTLTNWTMEFERW---APAVRTL 644
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHF 308
+L R + + + +D + +Y+ ++K + +L + +I DE H
Sbjct: 645 ILKGSPAVRREAYPRLRA-------VDFQVCLTTYEYIIKERPLLSRIKWIHMIIDEGHR 697
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
+KN ++K + TL ++Y L+L+GTP + EL+ L + P ++ +V + +
Sbjct: 698 MKNVKSK-LSQTLNEYYSSRYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWF- 755
Query: 369 KGGVFGIYQGAS---NHEE-------LHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDV 418
F G N EE LH +++ ++RRLKKDV ++LP K + ++ +
Sbjct: 756 -NAPFANTGGEKMEMNEEEALLVVKRLHKVLRP-FLLRRLKKDVESELPDKVEKVIYTKM 813
Query: 419 AEKDMRQIYALFRELEVVKGKIKACKSE--EEVQSLKFTEKNLINKIY------------ 464
+ + +Y ++ + + + K + + +Q+ + + N Y
Sbjct: 814 SALQWK-LYESVQKYKTLPTDMSVAKPQKRQNLQNALMQLRKICNHPYVFREVDEDFTVG 872
Query: 465 --TDSAEAKIPAVLDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDG 518
TD ++ + L+ ++ + G K LIF ++ + F + R+DG
Sbjct: 873 NTTDEQIIRVAGKFELLDRILPKLFKTGHKVLIFFQMTEIMTIVSDFFDYRGWKYCRLDG 932
Query: 519 GTPPASRQALVTEFQEKDD-VKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAED 577
T RQ L++ F + + + +LS +AGG+GL L +A TVI + W P +QA+D
Sbjct: 933 STKAEDRQTLLSTFNDPNSPYQVFILSTRAGGLGLNLQSADTVIIYDTDWNPHADLQAQD 992
Query: 578 RAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
RAHRIGQ V V L+++ TV+++V + KLE G+V+
Sbjct: 993 RAHRIGQKKEVRVLRLISSGTVEELVLARAQRKLEIDGKVI 1033
>gi|306824889|ref|ZP_07458233.1| Snf2 family protein [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304433100|gb|EFM36072.1| Snf2 family protein [Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 1031
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 141/482 (29%), Positives = 229/482 (47%), Gaps = 56/482 (11%)
Query: 170 IESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FRDVWPVLILT 223
+++ L +Q GVR+ L H GG +LAD+MGLGKT+Q IA T + VLIL
Sbjct: 578 VQASLRDYQEKGVRWLQMLHHYGFGG--ILADDMGLGKTLQTIAFLTSQVTENSRVLILA 635
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
PS L +WA +++ P ++ VV +NR I+S N + + SY
Sbjct: 636 PSGLIYNWADEFRKF--APQLDLAVVHGL--KANREA--ILSENHQ--------IYVTSY 681
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
+ + F + DE+ +KNAQ K + + A +AL SGTP +
Sbjct: 682 ATFRQDSELYQEMAFDFLFLDEAQVMKNAQTKIAQSLRQFVVPAVFAL--SGTPIENHLG 739
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVL 403
EL+ + + P + + E+ + + +K VM RR K++VL
Sbjct: 740 ELWSIFQIVLPGLLPSKKEFMKLPA--------------DRVAQFIKPFVM-RRKKEEVL 784
Query: 404 AQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE------EVQSLKFTEK 457
+LP + V+ + E + IY +L+ ++ ++ +E E+ S +
Sbjct: 785 TELP-DLIEVVYKNELEDQQKAIY--LAQLQQMRDRLAQVTDQEFQRSRVEILSGLMRLR 841
Query: 458 NLINK--IYTDS---AEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
+ + ++ D+ A K+ ++ D L V + G + LIF+ + ML+ I Q +
Sbjct: 842 QICDTPALFMDNYQGASGKLDSLRDLLLQVADGGHRVLIFSQFKGMLEKIEQELPNLGLT 901
Query: 513 CIRIDGGTPPASRQALVTEF-QEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
+I G TP RQ + F Q + D+ ++S+KAGGVGL LT A TVI +L W P
Sbjct: 902 SFKITGSTPAQDRQEMTKIFNQGERDI--FLISLKAGGVGLNLTGADTVILVDLWWNPAV 959
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ 631
QA RAHR+GQ V VY L+ T+++ + ++ K + QVLDG E+ +S ++
Sbjct: 960 EAQAIGRAHRMGQERKVEVYRLITRGTIEEKIQELQEQKKHLISQVLDGTESRASLSLAE 1019
Query: 632 IR 633
IR
Sbjct: 1020 IR 1021
>gi|293365804|ref|ZP_06612510.1| Snf2 family protein [Streptococcus oralis ATCC 35037]
gi|307703327|ref|ZP_07640271.1| bacterial SNF2 helicase associated family protein [Streptococcus
oralis ATCC 35037]
gi|291315737|gb|EFE56184.1| Snf2 family protein [Streptococcus oralis ATCC 35037]
gi|307623103|gb|EFO02096.1| bacterial SNF2 helicase associated family protein [Streptococcus
oralis ATCC 35037]
Length = 1031
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 227/481 (47%), Gaps = 54/481 (11%)
Query: 170 IESKLLPFQRDGVRF--ALQH---GGRILLADEMGLGKTIQAIAVATC-FRDVWPVLILT 223
+++ L +Q GVR+ L H GG +LAD+MGLGKT+Q IA T + +LIL
Sbjct: 578 VQASLRDYQEKGVRWLQMLHHYGFGG--ILADDMGLGKTLQTIAFLTSQVTEDSRILILA 635
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
PS L +WA +++ P ++ VV +NR I+S N + + SY
Sbjct: 636 PSGLIYNWADEFRKF--APQLDLAVVHGL--KANREA--ILSENHQ--------IYVTSY 681
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
+ + F + DE+ +KNAQ K + + A +AL SGTP +
Sbjct: 682 ATFRQDSELYQEIAFDFLFLDEAQVMKNAQTKIAQSLRQFVVPAVFAL--SGTPIENHLG 739
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVL 403
EL+ + + P + + E+ + + +K VM RR K++VL
Sbjct: 740 ELWSIFQIVLPGLLPSKKEFMKLPA--------------DRVAQFIKPFVM-RRKKEEVL 784
Query: 404 AQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEE------EVQSLKFTEK 457
+LP + V+ + E + IY +L+ ++ ++ +E E+ S +
Sbjct: 785 TELP-DLIEVVYKNELEDQQKAIY--LAQLQQMRDRLAQVTDQEFQRSRVEILSGLMRLR 841
Query: 458 NLINK--IYTD---SAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
+ + ++ D A K+ ++ D L V + G + LIF+ + ML+ I Q +
Sbjct: 842 QICDTPALFMDDYQGASGKLDSLRDLLLQVADGGHRVLIFSQFKGMLEKIEQELPVLGLT 901
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
+I G TP RQ + F + + A ++S+KAGGVGL LT A TVI +L W P
Sbjct: 902 SFKITGSTPAHDRQEMTKAFNQGER-DAFLISLKAGGVGLNLTGADTVILVDLWWNPAVE 960
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQI 632
QA RAHR+GQ V VY L+ T+++ + ++ K + QVLDG E+ +S ++I
Sbjct: 961 AQAIGRAHRMGQEQMVEVYRLITKGTIEEKIQELQEQKKHLVSQVLDGTESRASLSLAEI 1020
Query: 633 R 633
R
Sbjct: 1021 R 1021
>gi|292498|gb|AAA80560.1| transcription activator, partial [Homo sapiens]
Length = 769
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 243/509 (47%), Gaps = 63/509 (12%)
Query: 162 KYDQIPAHIESK-LLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATC---FR 214
+++ P++++ L +Q G+ + + ++G +LADEMGLGKT+Q IA+ +R
Sbjct: 170 RFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYR 229
Query: 215 DV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
++ P ++L P S +W ++W +P ++ + R+ F +P
Sbjct: 230 NIPGPHMVLVPKSTLHNWMNEFKRW--VPSLRVICFVGDKDA--RAAFI-----RDEMMP 280
Query: 274 LDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLL 333
+ + SY++V+K +++ +++ ++ DE+H +KN ++K + K+ LLL
Sbjct: 281 GEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLL 338
Query: 334 SGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATV 393
+GTP + EL+ L L PDV+ + ++ + + G + E LH ++K
Sbjct: 339 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-F 394
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEVQS 451
++RR+K DV LP K+ +++L ++ K R+ Y L ++++V+ K K + +
Sbjct: 395 LLRRIKTDVEKSLPPKKEIKIYLGLS-KMQREWYTKILMKDIDVLNSSGKMDKMR--LLN 451
Query: 452 LKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAHH 495
+ + N Y D AE P D L + E G + LIF+
Sbjct: 452 ILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
Query: 496 QPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQ---EKDDVKAA----------V 542
+LD + + + R+DG TP R+ E + +++ ++A +
Sbjct: 512 TRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFM 571
Query: 543 LSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDI 602
LS +AGG+G+ L +A VI + W P +QA DRAHRIGQ V V+ L+ ++TV++
Sbjct: 572 LSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEER 631
Query: 603 VWDVVRSKLE------NLGQVLDGHENSL 625
+ + KL G+++D N L
Sbjct: 632 IVERAEIKLRLDSIVIQQGRLIDQQSNKL 660
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,845,897,785
Number of Sequences: 23463169
Number of extensions: 399450281
Number of successful extensions: 1250330
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 12807
Number of HSP's successfully gapped in prelim test: 2356
Number of HSP's that attempted gapping in prelim test: 1187027
Number of HSP's gapped (non-prelim): 28472
length of query: 666
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 517
effective length of database: 8,863,183,186
effective search space: 4582265707162
effective search space used: 4582265707162
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)