BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005980
(666 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NZC9|SMAL1_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 OS=Homo sapiens
GN=SMARCAL1 PE=1 SV=1
Length = 954
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 226/575 (39%), Positives = 334/575 (58%), Gaps = 46/575 (8%)
Query: 88 AKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV 146
A +Y L++ F+++ ++ K R W+F L K+++++ V+++ L +
Sbjct: 345 ADISYSQDLIALFKQMDSRRYDVKTRKWSF---LLEEHSKLIAKVRCLPQVQLDPLPTTL 401
Query: 147 QRAIASA------SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMG 199
A AS S PD+ E ++ + S L+PFQR GV FA+ GGR+LLAD+MG
Sbjct: 402 TLAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMG 461
Query: 200 LGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNR 258
LGKTIQAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G +R
Sbjct: 462 LGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVT---GKDR 518
Query: 259 SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTA 318
GL NI+S+D++ KL+ L + FK+VI DESHFLKN++ R
Sbjct: 519 L--------------TAGLINIVSFDLLSKLEKQLKTP-FKVVIIDESHFLKNSRTARCR 563
Query: 319 ATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI- 375
A +P++K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC K +G
Sbjct: 564 AAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWD 623
Query: 376 YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEV 435
Y G+SN EL L++ VM+RRLK DVL+QLP K+R+ V + + R AL +
Sbjct: 624 YSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAALDAAAKE 683
Query: 436 VKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAH 494
+ K K K +K+ + + +AEAKIP+V++Y+ ++E+G KFL+FAH
Sbjct: 684 MTTKDKT----------KQQQKDALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAH 733
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTL 554
H+ +LDAI Q +K V IRIDG T A R+ L +FQ + AVLS+ A +GLT
Sbjct: 734 HKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF 793
Query: 555 TAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENL 614
++A V+FAEL W PG LIQAEDR HRIGQ SSV ++YL+A T DD +W +++ K++ L
Sbjct: 794 SSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVL 853
Query: 615 GQVLDGHENSLEVSSSQ--IRSSPAKQKTLDSFLK 647
+ N E++ S + P +QK D F K
Sbjct: 854 AEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQK 888
>sp|Q6NZP1|ZRAB3_MOUSE DNA annealing helicase and endonuclease ZRANB3 OS=Mus musculus
GN=Zranb3 PE=1 SV=1
Length = 1069
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/476 (42%), Positives = 296/476 (62%), Gaps = 33/476 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAIA+A +++ WP+LI+
Sbjct: 27 DFLPDKLRTKLLPFQKDGIVFALRRDGRCMVADEMGLGKTIQAIAIAYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQ--LGGSNRSGFTIVSSNTKRNIPLDGLFNI 280
PSSLR W +++W+ + P EI VV+++ +G S T++ + +
Sbjct: 87 PSSLRYPWIEELEKWIPELEPEEINVVMNKTDIGRIPGSRVTVLG------------YGL 134
Query: 281 ISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALS 340
++ D L + L + NF++VI DESH++K+ A R+ LP+++KA+ A+LL+GTPAL
Sbjct: 135 LTTDAET-LLDALNTQNFRVVIVDESHYMKSRTAARSKILLPMVQKARRAILLTGTPALG 193
Query: 341 RPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATV 393
RP ELF Q+EAL+P + EY RYC V FG +GASN ELH L+ +
Sbjct: 194 RPEELFMQIEALFPQKFGTWIEYAKRYCNAHVRYFGKRRQWDCRGASNLSELHQLLN-DI 252
Query: 394 MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK 453
MIRRLK +VL+QLP K RQ++ D+ ++++ A F E + + + E
Sbjct: 253 MIRRLKSEVLSQLPPKVRQRIPFDLPPAAVKELNASFEEWQKLMRAPNSGAME------- 305
Query: 454 FTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVH 512
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 306 -TVMGLITRMFKQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSR 364
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDL 572
IRIDG P + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG +
Sbjct: 365 YIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHI 424
Query: 573 IQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS 628
QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + L+ +
Sbjct: 425 KQAEDRAHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKLQAT 480
>sp|E1BB03|ZRAB3_BOVIN DNA annealing helicase and endonuclease ZRANB3 OS=Bos taurus
GN=ZRANB3 PE=3 SV=3
Length = 1074
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/476 (41%), Positives = 294/476 (61%), Gaps = 29/476 (6%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVL 220
++ D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKT+QAI +A +++ WP+L
Sbjct: 24 KQLDFLPDKLRAKLLPFQKDGITFALRRDGRCMVADEMGLGKTVQAIGIAYFYKEEWPLL 83
Query: 221 ILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFN 279
I+ PSSLR W I++W+ + P EI V+ N++ +S+ +K + GL
Sbjct: 84 IVVPSSLRYPWTEEIEKWIPELSPEEINVI------QNKTDVGRIST-SKVTVLGYGLLT 136
Query: 280 IISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPAL 339
+ ++ L N NFK+VI DESH++K+ A R+ LPI++KA+ A+LL+GTPAL
Sbjct: 137 TDAETLIDALNN----QNFKVVIVDESHYMKSRSATRSRILLPIVQKAKRAILLTGTPAL 192
Query: 340 SRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKAT 392
RP ELF Q+EAL+P + EY RYC V FG +GASN ELH L+ +
Sbjct: 193 GRPEELFMQIEALFPQKFGTWTEYAKRYCNAHVRYFGRRSQWDCRGASNLNELHQLL-SD 251
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSL 452
+MIRRLK +VL QLP K RQ++ D+ +++ + F E E + + +E
Sbjct: 252 IMIRRLKTEVLTQLPPKIRQRIPFDLPSAAAKELNSSFEEWEKLMRDPYSGATE------ 305
Query: 453 KFTEKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKV 511
T LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K
Sbjct: 306 --TVMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKT 363
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
IRIDG P + R LV +FQ+ + + A+LS++A G GLT TAA+ V+FAEL W PG
Sbjct: 364 RYIRIDGSVPSSERIHLVNQFQKDPETRVAILSIQAAGQGLTFTAATHVVFAELYWDPGH 423
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
+ QAEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + L+
Sbjct: 424 IKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKLQA 479
>sp|B2ZFP3|SMAL1_DANRE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 OS=Danio rerio
GN=smarcal1 PE=2 SV=1
Length = 807
Score = 364 bits (934), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 227/592 (38%), Positives = 337/592 (56%), Gaps = 45/592 (7%)
Query: 77 KFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY- 135
K L + + Y ++ F+++P +++ K R WTF L K++++++
Sbjct: 238 KCVLVSRSRLEVDIGYQADVIGIFKQMPSKSYDMKTRKWTF---LLEDYGKLMADLNELP 294
Query: 136 NVEIENLHPLVQRAIASA-----SAAPDLRE-KYDQIPAHIESKLLPFQRDGVRFALQHG 189
VE E L V ++ +S S AP E I + L+PFQRDGV FA+
Sbjct: 295 TVETEPLPHAVLQSFSSQFEKTQSQAPVPPEADLSHIDPQLTRSLMPFQRDGVNFAVSRE 354
Query: 190 GRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVV 248
GR+LLAD+MGLGKT+QAI +A +R WP+L++ PSS+R WA ++WL ++ P I V
Sbjct: 355 GRLLLADDMGLGKTVQAICIAAYYRSEWPLLVVAPSSVRFTWAEAFRRWLPSVKPDSINV 414
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHF 308
V + ++ R+ GL NIISYD++ K+ SS F ++I DESHF
Sbjct: 415 V-------------VKGKDSLRS----GLINIISYDLLNKMDKQPPSSPFNVIIMDESHF 457
Query: 309 LKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 368
LKN + R A LP++K A+ +LLSGTPA+SRP EL+ Q++A+ P ++ H++G RYC
Sbjct: 458 LKNMKTARCRAALPLLKTAKRVILLSGTPAMSRPAELYTQIQAVRPALFPRFHDFGTRYC 517
Query: 369 KGGVFGI---YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQ 425
Y +SN EL L++ ++M+RRLK +VL+QLP K+R+ V + + R
Sbjct: 518 DAKQLPWGWDYSSSSNLTELKLLLEESLMLRRLKSEVLSQLPAKQRKVVTVTTDGINSRT 577
Query: 426 IYAL-FRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIE 484
AL E+ KG KS+E+ L F + +AEAKI A+++Y+ ++E
Sbjct: 578 KAALNAAARELAKGYHN--KSQEKEALLVF---------FNHTAEAKIRAIMEYISDMLE 626
Query: 485 AGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVL 543
G KFL+FAHH+ +LD+I + +K + IRIDG TP A RQ L FQ AVL
Sbjct: 627 CGREKFLVFAHHKLVLDSITKELGEKSISFIRIDGSTPSAERQLLCERFQASQQSCVAVL 686
Query: 544 SMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIV 603
S+ A +GLTL +A+ V+FAEL W PG LIQAEDR HRIGQ S+V+++YL+A T DD +
Sbjct: 687 SITAANMGLTLHSAALVVFAELFWNPGVLIQAEDRVHRIGQTSNVDIHYLVAKGTADDYL 746
Query: 604 WDVVRSKLENLGQVLDGHEN-SLEVSSSQIRSSPAKQKTLDSFLKRCNNVDD 654
W ++++K+ L QV N S S+ S +Q T+ +R + D+
Sbjct: 747 WPMIQAKMNVLEQVGLSESNISENAESASFHSRDRQQLTITEMFQRSFDEDE 798
>sp|Q0P4U8|SMAL1_XENTR SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 OS=Xenopus
tropicalis GN=smarcal1 PE=2 SV=1
Length = 942
Score = 364 bits (934), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 223/578 (38%), Positives = 334/578 (57%), Gaps = 44/578 (7%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYN-VEIENL-HPLVQRA 149
Y ++ F+++ ++ K R W+F L +K++ + VE+E L P++Q
Sbjct: 353 YHAEIIGLFKQMNTRNYDTKTRKWSF---MLEDYQKLMESVRNIQQVEVEPLPRPVLQAF 409
Query: 150 IASASAAPDLREK-----YDQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTI 204
+RE+ Q+ + + S L+PFQRDGV FA+ GR+LLAD+MGLGKTI
Sbjct: 410 APQFGKTTIIREEIPEVDLSQVDSKLGSNLMPFQRDGVNFAVSREGRLLLADDMGLGKTI 469
Query: 205 QAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTI 263
QAI +A +R WP+L++ PSS+R WA Q+WL +I P + V++
Sbjct: 470 QAICIAAYYRKEWPLLVVAPSSVRFTWAEAFQRWLPSIRPESVNVIV------------- 516
Query: 264 VSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPI 323
T R+ L NI+S+D++ K+ +++ F+++I DESHFLKN + R A +P+
Sbjct: 517 ----TGRDSQSASLINIVSFDLLGKMDK-QIAATFQVIIIDESHFLKNVKTARCKAAMPL 571
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGAS 380
+K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H++G RYC K +G Y G+S
Sbjct: 572 LKSAKRVMLLSGTPAMSRPAELYTQIAAVRPSFFPRFHDFGIRYCDAKQMPWGWDYSGSS 631
Query: 381 NHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKI 440
N EL L++ ++MIRRLK +VL+QLP K+R+ V + + AL + +
Sbjct: 632 NLNELKLLLEESIMIRRLKSEVLSQLPAKQRKMVVVAPEGITAKTKAALAAAAKEMAKGF 691
Query: 441 KACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPML 499
K+ K EK + Y +AEAKI +VL+Y+ ++E+G KFL+FAHH+ +L
Sbjct: 692 KS----------KVQEKEALLLFYNRTAEAKIRSVLEYIMDLLESGREKFLVFAHHKLVL 741
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
D I + KK V IRIDG T A RQ+L +FQ + AVLS+ A +GLTL++A
Sbjct: 742 DHICEELGKKDVPYIRIDGNTSSADRQSLCHKFQMSEKSCVAVLSITAANMGLTLSSADL 801
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
V+FAEL W PG LIQAEDR HRIGQ SSVN++YL+A T DD +W +++ K++ LGQ
Sbjct: 802 VVFAELFWNPGVLIQAEDRVHRIGQTSSVNIHYLVAKGTADDYLWPMIQEKIKVLGQAGL 861
Query: 620 GHENSLEVS-SSQIRSSPAKQKTLDSFLKRCNNVDDSE 656
N E + S+ KQKT+ +R + + +E
Sbjct: 862 SEANFSETTESTDYFYKDPKQKTIYDLFQRSFSEEGAE 899
>sp|Q498E7|SMAL1_XENLA SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 OS=Xenopus laevis
GN=smarcal1 PE=2 SV=1
Length = 960
Score = 363 bits (932), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 226/570 (39%), Positives = 331/570 (58%), Gaps = 44/570 (7%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGYN-VEIENLHPLVQRAI 150
Y ++ F+++ ++ K R W+F L +K++ + VE+E L V +A
Sbjct: 371 YHTEIIGLFKQMNTRNYDTKTRKWSF---MLEDYQKLMESVRNIQQVEVEPLPRPVLQAF 427
Query: 151 AS--ASAAPDLREKYDQIPAHIESKL----LPFQRDGVRFALQHGGRILLADEMGLGKTI 204
A L E D +H++SKL +PFQRDGV FA+ GR+LLAD+MGLGKTI
Sbjct: 428 APQFEKTTISLAEIEDVDLSHVDSKLIGNLMPFQRDGVNFAISREGRLLLADDMGLGKTI 487
Query: 205 QAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTI 263
QAI +A +R WP+L++ PSS+R WA +WL ++ P + V++
Sbjct: 488 QAICIAAYYRKEWPLLVVAPSSVRFTWAEAFHRWLPSLNPESVNVIV------------- 534
Query: 264 VSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPI 323
T R+ L NIIS+D++ K+ +++NFK++I DESHFLKN + R A +P+
Sbjct: 535 ----TGRDSQSANLINIISFDLLGKMDK-QIAANFKVIIIDESHFLKNVKTARCKAAMPL 589
Query: 324 IKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGAS 380
+K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H++G RYC K +G Y G+S
Sbjct: 590 LKSAKRVMLLSGTPAMSRPAELYTQIAAVRPTFFPRFHDFGIRYCDAKQMPWGWDYSGSS 649
Query: 381 NHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKI 440
N EL L++ ++MIRRLK +VL+QLP K+R+ V + + AL + +
Sbjct: 650 NLNELKLLLEESIMIRRLKSEVLSQLPAKQRKMVVVAPEGITAKTKAALAAAAKEMAKGF 709
Query: 441 KACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPML 499
K+ K EK + Y +AEAKI +VL+Y+ ++E+G KFL+FAHH+ +L
Sbjct: 710 KS----------KVQEKEALLLFYNRTAEAKIRSVLEYIIDLLESGREKFLVFAHHKLVL 759
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
D I + KK+V IRIDG T A RQ+L +FQ + AVLS+ A +GLTL++A
Sbjct: 760 DNICEELGKKEVPYIRIDGNTSSADRQSLCHKFQFSEKSCVAVLSITAANMGLTLSSADL 819
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
V+FAEL W PG LIQAEDR HRIGQ SSVN++YL+A T DD +W +++ K++ LGQ
Sbjct: 820 VVFAELFWNPGVLIQAEDRVHRIGQTSSVNIHYLVAKGTADDYLWPMIQEKIKVLGQAGL 879
Query: 620 GHENSLEVS-SSQIRSSPAKQKTLDSFLKR 648
N E + S+ KQKT+ +R
Sbjct: 880 SEANFSETTESTDYFYKDPKQKTIYDLFQR 909
>sp|B4F769|SMAL1_RAT SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 OS=Rattus
norvegicus GN=Smarcal1 PE=2 SV=1
Length = 910
Score = 362 bits (930), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 229/617 (37%), Positives = 339/617 (54%), Gaps = 53/617 (8%)
Query: 61 GSLGDFSKEQVPKLSV---KFFLHTSGNIAAKFTYDPVLVSAFRKIPKATWNAKERLWTF 117
G+ G S P L+ + L + Y V+++ F+++ ++ K R W F
Sbjct: 272 GTGGQTSLPSAPSLTFVTGRCMLISRARFEVDIGYSEVVIALFKQMESRNYDPKTRKWNF 331
Query: 118 PVPFLSSAEKVLSEISGY-NVEIENLHPLVQRAIASASAAPDLREKYD-------QIPAH 169
L K+++ V+++ L + A AS L+ K D + A
Sbjct: 332 ---LLEEHNKLIARSRELKQVQLDPLPKTLTLAFASQLEKTSLQSKADVPEADLSGVDAK 388
Query: 170 IESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRL 229
+ S L+PFQR+GV FA+ GR+LLAD+MGLGKTIQAI +A +R WP+L++ PSS+R
Sbjct: 389 LVSNLMPFQREGVSFAISKRGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRF 448
Query: 230 HWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLK 288
W +WL ++ P +I VV++ G GL NI+S+D++ K
Sbjct: 449 TWEQAFLRWLPSLSPEDINVVVTGKGRLTA-----------------GLVNIVSFDLLSK 491
Query: 289 LQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQ 348
L+ L + FK+VI DESHFLKN + R A +PI+K A+ +LLSGTPA+SRP EL+ Q
Sbjct: 492 LEKQLKTP-FKVVIIDESHFLKNIKTARCRAAVPILKVAKRVILLSGTPAMSRPAELYTQ 550
Query: 349 LEALYPDVYKNVHEYGNRYCKGGVFGI---YQGASNHEELHNLMKATVMIRRLKKDVLAQ 405
+ A+ P + H +G RYC Y G+SN EL L++ VM+RRLK DVL+Q
Sbjct: 551 IIAVKPTFFPQFHAFGLRYCDAKRLPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQ 610
Query: 406 LPVKRRQQVFLDVAEKDMRQIYALFREL-EVVKGKIKACKSEEEVQSLKFTEKNLINKIY 464
LP K+R+ V ++ R AL E+ K K K +K + +
Sbjct: 611 LPAKQRKMVVVNPGRISTRAKAALDAAAKEMTKDKTKQ------------QQKEALLVFF 658
Query: 465 TDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
+AEAKIP V++Y+ ++E+G KFL+FAHH+ +LDAI + +K V IRIDG TP A
Sbjct: 659 NRTAEAKIPCVIEYILDLLESGREKFLVFAHHKVLLDAIAKELERKNVQHIRIDGSTPSA 718
Query: 524 SRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIG 583
R+ L +FQ AVLS+ A +GLT ++A V+FAEL W PG LIQAEDR HRIG
Sbjct: 719 DREDLCQQFQLSKGHTVAVLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIG 778
Query: 584 QVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQ--IRSSPAKQKT 641
Q +SV ++YL+A T DD +W +++ K++ LG+ N E++ + + P KQKT
Sbjct: 779 QTNSVGIHYLVAKGTADDYLWPLIQEKIKVLGEAGLSETNFSEMTEATDYLYKDP-KQKT 837
Query: 642 LDSFLKRCNNVDDSEHQ 658
+ S ++ D ++ +
Sbjct: 838 IYSLFQQSFEDDGNDME 854
>sp|Q5FWF4|ZRAB3_HUMAN DNA annealing helicase and endonuclease ZRANB3 OS=Homo sapiens
GN=ZRANB3 PE=1 SV=2
Length = 1079
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/473 (41%), Positives = 288/473 (60%), Gaps = 29/473 (6%)
Query: 164 DQIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILT 223
D +P + +KLLPFQ+DG+ FAL+ GR ++ADEMGLGKTIQAI + +++ WP+LI+
Sbjct: 27 DFLPDRLRAKLLPFQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYKEEWPLLIVV 86
Query: 224 PSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
PSSLR W I++W+ + P EI V+ N++ +S+ +K + GL +
Sbjct: 87 PSSLRYPWTEEIEKWIPELSPEEINVI------QNKTDVRRMST-SKVTVLGYGLLTADA 139
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
++ L N NFK+VI DESH++K+ A R+ LPI++KA+ A+LL+GTPAL RP
Sbjct: 140 KTLIDALNN----QNFKVVIVDESHYMKSRNATRSRILLPIVQKARRAILLTGTPALGRP 195
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGV--FGI-----YQGASNHEELHNLMKATVMI 395
ELF Q+EAL+P + +Y RYC + FG +GASN ELH L+ + +MI
Sbjct: 196 EELFMQIEALFPQKFGRWTDYAKRYCNAHIRYFGKRPQWDCRGASNLNELHQLL-SDIMI 254
Query: 396 RRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFT 455
RRLK +VL QLP K RQ++ D+ +++ F E E + + E T
Sbjct: 255 RRLKTEVLTQLPPKVRQRIPFDLPSAAAKELNTSFEEWEKIMRTPNSGAME--------T 306
Query: 456 EKNLINKIYTDSAEAKIPAVLDYLETVIEA-GCKFLIFAHHQPMLDAIHQLFLKKKVHCI 514
LI +++ +A AK AV DY++ +++ KFL+FAHH ML A + ++ K I
Sbjct: 307 VMGLITRMFKQTAIAKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYI 366
Query: 515 RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQ 574
RIDG + R LV +FQ+ D + A+LS++A G GLT TAAS V+FAEL W PG + Q
Sbjct: 367 RIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPGHIKQ 426
Query: 575 AEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEV 627
AEDRAHRIGQ SSVN++YL+AN T+D ++W ++ K + G L+G + ++
Sbjct: 427 AEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKIQA 479
>sp|Q8BJL0|SMAL1_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 OS=Mus musculus
GN=Smarcal1 PE=2 SV=1
Length = 910
Score = 351 bits (901), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 215/567 (37%), Positives = 321/567 (56%), Gaps = 50/567 (8%)
Query: 92 YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLVQRAI 150
Y ++ F+++ +++ K R W+F L K+++ V+++ L V A
Sbjct: 308 YSEAVIGLFKQMESRSYDIKTRKWSF---LLEEHNKLIARSRELKQVQLDPLPKTVTLAF 364
Query: 151 AS--ASAAPDLREKYDQ-----IPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKT 203
AS +P L+ + + A + S L+PFQR+GV FA+ GR+LLAD+MGLGKT
Sbjct: 365 ASQLEKTSPKLKADVPEADLSGVDAKLVSSLMPFQREGVSFAISKRGRLLLADDMGLGKT 424
Query: 204 IQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFT 262
+QAI +A +R WP+L++ PSS+R W +WL ++ P I VV++ G
Sbjct: 425 VQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPENINVVVTGKGRLTA---- 480
Query: 263 IVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLP 322
GL NI+S+D++ KL+ L + FK+VI DESHFLKN + R A +P
Sbjct: 481 -------------GLVNIVSFDLLCKLERQLKTP-FKVVIIDESHFLKNIKTARCRAAVP 526
Query: 323 IIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGI---YQGA 379
I+K A+ +LLSGTPA+SRP EL+ Q+ A+ P + H +G RYC Y G+
Sbjct: 527 ILKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRLPWGWDYSGS 586
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALFREL-EVVKG 438
SN EL L++ +M+RRLK DVL+QLP K+R+ V ++ R AL E+ K
Sbjct: 587 SNLGELKLLLEEAIMLRRLKSDVLSQLPAKQRKMVVVNPGRISSRAKAALDAAAKEMTKD 646
Query: 439 KIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQP 497
K K +K + + +AEAKIP V++Y+ ++++G KFL+FAHH+
Sbjct: 647 KTKQ------------QQKEALLVFFNRTAEAKIPCVVEYILDLLDSGREKFLVFAHHKV 694
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAA 557
+LDA+ + +K V IRIDG TP A R+A FQ A+LS+ A +GLT + A
Sbjct: 695 ILDAVAKELERKNVQHIRIDGSTPSADREAQCQRFQLSKGHTVALLSITAANMGLTFSTA 754
Query: 558 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQV 617
V+FAEL W PG LIQAEDR HRIGQ +SV+++YL+A T DD +W +++ K++ LG+
Sbjct: 755 DLVVFAELFWNPGVLIQAEDRVHRIGQTNSVSIHYLVAKGTADDYLWPLIQEKIKVLGEA 814
Query: 618 LDGHENSLEVSSSQ--IRSSPAKQKTL 642
N E++ + + P KQKT+
Sbjct: 815 GLSETNFSEMTEATDYVHKDP-KQKTI 840
>sp|Q8MNV7|SMAL1_CAEEL Putative SMARCAL1-like protein OS=Caenorhabditis elegans GN=C16A3.1
PE=3 SV=1
Length = 690
Score = 338 bits (868), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 220/590 (37%), Positives = 323/590 (54%), Gaps = 45/590 (7%)
Query: 72 PKLSVKFFLHTSGNIAAKF-TYDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLS 130
P + VK L I +F + ++ +++P ++ +R WT + +L
Sbjct: 98 PTIGVKLKLDIGDRIKIEFYPFHSAVIDLIKQVPSRNYDPAKRSWTVASSDHITISNILK 157
Query: 131 EISGYNVEIENLHPLVQRAIA----SASAAP-DLREKYDQIPAHIESKLLPFQRDGVRFA 185
+ VE+E PL Q I AAP DL D P+ IE +L P+Q++GV FA
Sbjct: 158 NATAVKVELE---PLPQNIIGLTNFKPKAAPSDLNTVMD--PSLIE-RLFPYQKEGVIFA 211
Query: 186 LQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSE 245
L+ GRILLADEMGLGK++QA+ +A ++ WP+LI+ P+S++ W + + I
Sbjct: 212 LERDGRILLADEMGLGKSVQALTIARYYKADWPLLIVCPASVKGAWKKQLNTFFPIIHRI 271
Query: 246 IVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADE 305
+V S+ + +SNT I+SY+ ++ +IL ++ +I DE
Sbjct: 272 FIV-----DKSSDPLPDVCTSNT---------VAIMSYEQMVLKHDILKKEKYRTIIFDE 317
Query: 306 SHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGN 365
SH LK+ +A+RT + K A + +LLSGTPALSRP ELF Q+ + ++ N HE+
Sbjct: 318 SHMLKDGKARRTKVATDLSKVALHVILLSGTPALSRPSELFTQIRLIDHKLFTNFHEFAI 377
Query: 366 RYCKG--GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKD 422
RYC G G F +G +N EEL +M +MIRRLK DVL LP KRR+ V++ D
Sbjct: 378 RYCDGKQGRFCFEAKGCTNSEELAAIMFKRLMIRRLKADVLKDLPEKRREVVYVSGPTID 437
Query: 423 MRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDY-LET 481
R +L+ KA E+V S++ ++L+ + Y+ + K AV ++ LE
Sbjct: 438 AR-----MDDLQ------KARADYEKVNSMERKHESLL-EFYSLTGIVKAAAVCEHILEN 485
Query: 482 VIEAGC---KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDV 538
K LIFAHHQ +LD I K+K+ IRIDG TP R AL FQ D++
Sbjct: 486 YFYPDAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCDSFQTDDNI 545
Query: 539 KAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDT 598
+ AVLS+ A GVG+TLTAAS V+FAE+ + PG L+QAEDRAHR+GQ SV V YL+A T
Sbjct: 546 RVAVLSITAAGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKT 605
Query: 599 VDDIVWDVVRSKLENLGQVLDGHENSLEVSSSQIRSSPAKQKTLDSFLKR 648
DD++W++V+ KL+ LGQV + +R + A Q + +LK+
Sbjct: 606 ADDVMWNMVQQKLDVLGQVSLSSDTFRTADKMHLRFNDAAQPGIAEYLKK 655
>sp|Q9TTA5|SMAL1_BOVIN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 OS=Bos taurus
GN=SMARCAL1 PE=2 SV=1
Length = 941
Score = 333 bits (853), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 221/620 (35%), Positives = 344/620 (55%), Gaps = 52/620 (8%)
Query: 58 APKGSLGDFSKEQVPKLSVKFF------LHTSGNIAAKFTYDPVLVSAFRKIPKATWNAK 111
+P S G +K +P F L + A +Y L++ F+++ ++ K
Sbjct: 308 SPSTSSGIIAKTGLPAAPSLAFVKGQCVLISRARFEADISYSEDLIALFKQMDSRKYDVK 367
Query: 112 ERLWTFPVPFLSSAEKVLSEISGY-NVEIENLHPLV-----QRAIASASAAPDLRE-KYD 164
R W+F L K++ + G V+++ L + Q S S D+ E
Sbjct: 368 TRKWSF---LLEEYSKLMERVRGPPQVQLDPLPKTLTLFRAQLQKTSLSPVADIPEADLS 424
Query: 165 QIPAHIESKLLPFQRDGVRFALQHGGRILLADEMGLGKTIQAIAVATCFRDVWPVLILTP 224
++ + + S LLPFQR GV FA+ GR+LLAD+MGLGKTIQAI +A +R WP+L++ P
Sbjct: 425 RVDSKLVSSLLPFQRAGVNFAIAQRGRLLLADDMGLGKTIQAICIAAYYRKEWPLLVVVP 484
Query: 225 SSLRLHWAAMIQQWL-NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISY 283
SS+R W +WL ++ P +I VV++ G +R DGL NI+S+
Sbjct: 485 SSVRFTWEQAFCRWLPSLNPLDINVVVT---GKDRL--------------TDGLVNIVSF 527
Query: 284 DVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPI 343
D++ KL+ L FK+VI DESHFLKN + AA +P++K A+ +LLSGTPA+SRP
Sbjct: 528 DLLSKLEKQLKPP-FKVVIIDESHFLKNIKTAVCAA-MPLLKVAKRVILLSGTPAMSRPA 585
Query: 344 ELFKQLEALYPDVYKNVHEYGNRYC--KGGVFGI-YQGASNHEELHNLMKATVMIRRLKK 400
EL+ Q+ A+ P + H +G RYC K +G Y G+SN EL L++ VM+RRLK
Sbjct: 586 ELYTQILAVRPTFFPQFHAFGLRYCGAKRQPWGWDYSGSSNLGELKLLLEEAVMLRRLKG 645
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLI 460
DVL+QLP K+ + + A + + K K + ++E L F
Sbjct: 646 DVLSQLPAKQPRWWWSPQARSMPGPEPPWMPPAKEMTTKDKTKQQQKEALILFFNR---- 701
Query: 461 NKIYTDSAEAKIPAVLDYLETVIEAGC-KFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGG 519
+AEAKIP++++Y+ ++E+G KFL+FAHH+ +LDAI + +K+V IRIDG
Sbjct: 702 ------TAEAKIPSIIEYILDLLESGREKFLVFAHHKVVLDAITKELERKRVQHIRIDGS 755
Query: 520 TPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRA 579
T A R+ + F ++ VLS+ A +GLT ++A V+F EL W PG L+QAEDR
Sbjct: 756 TSSADRETSASSFSCPRALR-GVLSITAANMGLTFSSADLVVFGELFWNPGVLMQAEDRV 814
Query: 580 HRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLEVS-SSQIRSSPAK 638
HRIGQ+SSV+++YL+A T DD +W +++ K++ LG+ N E++ ++ S +K
Sbjct: 815 HRIGQLSSVSIHYLVARGTADDYLWPLIQEKIKVLGEAGLSETNFSEMTEATDYFSKDSK 874
Query: 639 QKTLDSFLKRCNNVDDSEHQ 658
Q+ + + ++ D ++ +
Sbjct: 875 QQKIYNLFQKSFEEDGNDME 894
>sp|Q9VMX6|SMAL1_DROME SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 OS=Drosophila
melanogaster GN=Marcal1 PE=1 SV=2
Length = 755
Score = 331 bits (848), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 206/553 (37%), Positives = 298/553 (53%), Gaps = 43/553 (7%)
Query: 74 LSVKFFLHTSGNIAAKFT-YDPVLVSAFRKIPKATWNAKERLWTFPVPFLSSAEKVLSEI 132
++ +L ++ AA+ + Y LV+ F+ +P ++ + R+W+F + S + +++
Sbjct: 148 ITCNLYLISTHRFAAQTSGYHEQLVTVFKNMPTKCYDGQTRIWSFDLSDYQSLKTHAADL 207
Query: 133 SGYNVEIENLHPLVQRAIASASAAPDLREKYDQIPAHIESKLLPFQRDGVRFALQHGGRI 192
Y V + + V P+ R I + +L+PFQ+DGV FA+ GRI
Sbjct: 208 KPY-VHMNGIPKKVLDLCGQPPVVPE-RSVLASIEPKLADQLMPFQQDGVCFAIAQKGRI 265
Query: 193 LLADEMGLGKTIQAIAVATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQ 252
++ DEMGLGKT QA+AVA F+D WP+L+ T +S R WA I L P V VL
Sbjct: 266 MICDEMGLGKTYQALAVADYFKDDWPLLVCTTASTRDSWAKHIMDLLPKVPIHYVQVL-- 323
Query: 253 LGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA 312
N + + I SY+++ + ++ LM F +I DESH LKN+
Sbjct: 324 --------------NNNQLYVGEAKVLITSYNMMERHEDKLMQRKFGFIIFDESHTLKNS 369
Query: 313 QAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG-- 370
+AK T + +A+ +LLSGTPALSRP+ELF QL+ + + N E+ RYC G
Sbjct: 370 KAKCTTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQ-MIDGKFMNFMEFTTRYCDGKQ 428
Query: 371 GVFGI-YQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA-----EKDMR 424
FG G SN EEL ++ M+RR K +VL QL K R+ V LD A +
Sbjct: 429 STFGWDANGQSNLEELKVILHLKYMLRRTKVEVLPQLAEKNRETVVLDPALVWTNAETKE 488
Query: 425 QIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIE 484
+ A +EL+ KG+ TE+ L+ + Y +AE K AV YL+T+++
Sbjct: 489 TLDAFNKELKTAKGRA--------------TEEILL-RFYARTAEVKTRAVCAYLKTLVK 533
Query: 485 AGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLS 544
KF+IFAHH+ M+DAI KVH IRIDG T R V FQ+K K A+LS
Sbjct: 534 EQKKFIIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSSCKVALLS 593
Query: 545 MKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVW 604
+KA G+TLTAA ++FAEL W P L QAE RAHRIGQ V YL+A++T DDI+W
Sbjct: 594 LKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLIAHNTADDIIW 653
Query: 605 DVVRSKLENLGQV 617
+++++K E L +V
Sbjct: 654 NMLKNKQEVLSKV 666
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus
GN=Smarca5 PE=1 SV=1
Length = 1051
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 154 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 213
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 214 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKKW--VPTLRSVCLIGD--KEQRAAF 269
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 270 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 322
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 323 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 380
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 381 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 435
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 436 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 493
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 494 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 553
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 554 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 613
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 614 ERIVERAEMKL 624
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens
GN=SMARCA5 PE=1 SV=1
Length = 1052
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 243/491 (49%), Gaps = 49/491 (9%)
Query: 150 IASASAAPDLREKYDQIPAHIE-SKLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQ 205
+ +S A ++ +++ P++++ KL +Q G+ + + ++G +LADEMGLGKT+Q
Sbjct: 155 LTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQ 214
Query: 206 AIAV---ATCFRDV-WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGF 261
I++ +R++ P ++L P S +W + ++W +P V ++ R+ F
Sbjct: 215 TISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRW--VPTLRSVCLIGD--KEQRAAF 270
Query: 262 TIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAA 319
R++ L G +++ SY++++K +++ N++ ++ DE+H +KN ++K +
Sbjct: 271 V-------RDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 323
Query: 320 TLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGA 379
K LLL+GTP + EL+ L L PDV+ + ++ + + G +
Sbjct: 324 VREF--KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLV 381
Query: 380 SNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVK 437
E LH +++ ++RR+K DV LP K+ ++++ ++ K R+ Y L ++++++
Sbjct: 382 ---ERLHMVLRP-FLLRRIKADVEKSLPPKKEVKIYVGLS-KMQREWYTRILMKDIDILN 436
Query: 438 GKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLDY---------------LET 481
K K + ++ + N Y D AE P D L
Sbjct: 437 SAGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK 494
Query: 482 VIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA 541
+ E G + LIF+ +LD + + + R+DG TP RQ + + E + K
Sbjct: 495 LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFV 554
Query: 542 -VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVD 600
+LS +AGG+G+ L A VI + W P +QA DRAHRIGQ +V V+ + ++TV+
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 601 DIVWDVVRSKL 611
+ + + KL
Sbjct: 615 ERIVERAEMKL 625
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 232/478 (48%), Gaps = 49/478 (10%)
Query: 163 YDQIPAHIES-KLLPFQRDGVRF--ALQHGG-RILLADEMGLGKTIQAIAVATCFR---- 214
+D+ P +IE+ ++ +Q G+ + +LQH +LADEMGLGKT+Q I++ +
Sbjct: 120 FDKSPFYIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKN 179
Query: 215 DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P S +WA ++W P VV++ N+ R++ L
Sbjct: 180 KASPHLVIVPKSTLQNWANEFKKW--CPSINAVVLIGDEAARNQ---------VLRDVIL 228
Query: 275 DGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALL 332
F++ +Y+++LK++ L N++ +I DE+H +KN ++K + + ++ LL
Sbjct: 229 PQKFDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVREL--NSENRLL 286
Query: 333 LSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT 392
++GTP + EL+ L L PD++ + ++ + + + G + LH +++
Sbjct: 287 ITGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSNDAMSG---NTDLVQRLHKVLQP- 342
Query: 393 VMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEVQ 450
++RR+K DV L K+ +V++ ++ K R+ Y L ++++++ G K K+ +
Sbjct: 343 FLLRRIKSDVEKSLLPKKEVKVYVGLS-KMQREWYTKVLMKDIDIINGAGKVEKAR--LM 399
Query: 451 SLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAH 494
++ + +N Y D AE P D L E G + LIF+
Sbjct: 400 NILMHLRKCVNHPYLFDGAEPGPPFTTDQHLVDNSGKMVVLDKLLMKFKEQGSRVLIFSQ 459
Query: 495 HQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLT 553
MLD + + R+DG TP R + + D K +L+ +AGG+G+
Sbjct: 460 FSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGIN 519
Query: 554 LTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
L A VI + W P +QA DRAHRIGQ V V+ L+ +TVD+ + + +KL
Sbjct: 520 LATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKL 577
>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
melanogaster GN=Iswi PE=1 SV=1
Length = 1027
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 241/499 (48%), Gaps = 55/499 (11%)
Query: 162 KYDQIPAHIES-KLLPFQRDGVRFAL---QHGGRILLADEMGLGKTIQAIAVATCFR--- 214
++D PA+I+S ++ +Q G+ + + ++G +LADEMGLGKT+Q I++ +
Sbjct: 115 RFDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFK 174
Query: 215 -DVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIP 273
P +++ P S +W ++W PS V L +G + I R++
Sbjct: 175 NQAGPHIVIVPKSTLQNWVNEFKKWC---PSLRAVCL--IGDQDTRNTFI------RDVL 223
Query: 274 LDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYAL 331
+ G +++ SY++ ++ +++ N++ ++ DE+H +KN ++K + L K A L
Sbjct: 224 MPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSK-LSEILREFKTAN-RL 281
Query: 332 LLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKA 391
L++GTP + EL+ L L PDV+ + ++ + G + LH ++K
Sbjct: 282 LITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLG---DDALITRLHAVLKP 338
Query: 392 TVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKSEEEV 449
++RRLK +V +L K+ ++F+ ++ K R Y L ++++VV G K K +
Sbjct: 339 -FLLRRLKAEVEKRLKPKKEMKIFVGLS-KMQRDWYTKVLLKDIDVVNGAGKVEKMR--L 394
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIP--------------AVLD-YLETVIEAGCKFLIFA 493
Q++ + N Y D AE P A+LD L + E G + LIF+
Sbjct: 395 QNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFS 454
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
MLD + + + R+DG TP R + EF + K +LS +AGG+G+
Sbjct: 455 QMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGI 514
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE 612
L A VI + W P +QA DRAHRIGQ V V+ L+ TV++ + + KL
Sbjct: 515 NLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLR 574
Query: 613 ------NLGQVLDGHENSL 625
G+++D N L
Sbjct: 575 LDKMVIQGGRLVDNRSNQL 593
>sp|P32333|MOT1_YEAST TATA-binding protein-associated factor MOT1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MOT1 PE=1 SV=1
Length = 1867
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 152/541 (28%), Positives = 235/541 (43%), Gaps = 98/541 (18%)
Query: 165 QIPAHIESKLLPFQRDGVR---FALQHGGRILLADEMGLGKTIQAIAVATC--------- 212
++P I++ L +Q+DGV F ++ +L D+MGLGKT+Q I +
Sbjct: 1263 KLPIAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKEDY 1322
Query: 213 --FRDV----WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSS 266
R V P LI+ P SL HW Q+ P VVV + G T+
Sbjct: 1323 EKTRSVESRALPSLIICPPSLTGHWENEFDQY---APFLKVVVYA-------GGPTV--R 1370
Query: 267 NTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKK 326
T R D + SYDV +L + + + DE H +KN+Q+K A I
Sbjct: 1371 LTLRPQLSDADIIVTSYDVARNDLAVLNKTEYNYCVLDEGHIIKNSQSKLAKAVKEIT-- 1428
Query: 327 AQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE-- 384
A + L+L+GTP + +EL+ + L P + R+ K S+ E+
Sbjct: 1429 ANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQEA 1488
Query: 385 ----LHNLMKATV--MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF--RELEVV 436
L L K + M+RRLK+DVL+ LP K Q + ++ + +Q+Y F ++ VV
Sbjct: 1489 GVLALEALHKQVLPFMLRRLKEDVLSDLPPKIIQDYYCELGDL-QKQLYMDFTKKQKNVV 1547
Query: 437 KGKIK----ACKSEEEVQSLKFTEKNLINK--IYTDSAEAKIPAVLDYLET--------- 481
+ I+ A + Q+L++ K L N + ++ V DYL+
Sbjct: 1548 EKDIENSEIADGKQHIFQALQYMRK-LCNHPALVLSPNHPQLAQVQDYLKQTGLDLHDII 1606
Query: 482 -----------VIEAGC------------------------KFLIFAHHQPMLDAIHQLF 506
+ E G + LIF + MLD +
Sbjct: 1607 NAPKLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDL 1666
Query: 507 LKK---KVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFA 563
KK V +R+DG P RQ +V +F E + +L+ K GG+GL LT A TVIF
Sbjct: 1667 FKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLTGADTVIFV 1726
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHEN 623
E W P + +QA DRAHRIGQ VNVY ++ T+++ + + + K+ N+ + +N
Sbjct: 1727 EHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKM-NIASTVVNQQN 1785
Query: 624 S 624
S
Sbjct: 1786 S 1786
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 230/471 (48%), Gaps = 53/471 (11%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 203 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 259
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFK 299
PS V+ +G + R+ F R+ + G +++ SY++V+K +++ +++
Sbjct: 260 PSLRVICF--VGDKDVRAAFI-------RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 310
Query: 300 IVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKN 359
++ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 311 YLVIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNS 368
Query: 360 VHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVA 419
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++
Sbjct: 369 ADDFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS 424
Query: 420 EKDMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVL 476
K R+ Y L ++++V+ K K + ++ + N Y D AE P
Sbjct: 425 -KMQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTT 481
Query: 477 D---------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTP 521
D L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 482 DEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTP 541
Query: 522 PASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAH 580
R+ + F + K +LS +AGG+G+ L +A VI + W P +QA DRAH
Sbjct: 542 HEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAH 601
Query: 581 RIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENSL 625
RIGQ V V+ L+ ++TV++ + + KL G+++D N L
Sbjct: 602 RIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 652
>sp|P47264|Y018_MYCGE Uncharacterized ATP-dependent helicase MG018 OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=MG018 PE=3
SV=3
Length = 1031
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 224/463 (48%), Gaps = 43/463 (9%)
Query: 172 SKLLPFQRDGVRF--AL---QHGGRILLADEMGLGKTIQAI-AVATCF---RDVWPVLIL 222
+ L +Q++GV++ AL Q GG +LADEMGLGKT Q I A+ + + + P LI+
Sbjct: 576 NNLRKYQKEGVKWIRALEDNQFGG--ILADEMGLGKTAQVIFAMLDSYQSTKSLLPSLII 633
Query: 223 TPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIIS 282
P+SL L+W + Q++ P +IV N + V + K I L FN++
Sbjct: 634 VPASLLLNWKSEFQKF--APHVKIVT-----ANGNFKERSQVYESLKNQILLMS-FNVLR 685
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRP 342
D+ + F V+ DE+ +KN + T A I K + L L+GTP +R
Sbjct: 686 SDI-----KWISQKKFHYVVIDEAQGIKNENSTVTKAAKKI--KGNFCLALTGTPIENRL 738
Query: 343 IELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT--VMIRRLKK 400
++L+ + + P+ N ++ +++ + N E LMK T ++RR K
Sbjct: 739 LDLWSCFDFVLPNFLGNKKQFSDQF---------EKEKNDESFQKLMKKTSPFILRRTKN 789
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLI 460
VL +LP K ++++++E + +++Y + + + K K+ + SL +++
Sbjct: 790 KVLKELPKKIITDIYVELSE-EHQKLYDKQKTDGLKEIKESDAKNALNILSLILKLRHIC 848
Query: 461 -----NKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIR 515
N + +K A L+ + +E K ++F ++D Q +K+ +
Sbjct: 849 SLVKDNDVNDFEDNSKANAALNIIYEALENKRKVILFTQFLDVIDCFKQTLKNQKIDHLV 908
Query: 516 IDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQA 575
DG +R ++ +F + + S+KAGGVG+ LTAA VI ++ W QA
Sbjct: 909 FDGRKTVKNRNTIIQKFNSAKEPCVMLASLKAGGVGINLTAAEVVIHFDVWWNSAVENQA 968
Query: 576 EDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
DRAHRIGQ +V VY ++A +T+++ V V K E + + L
Sbjct: 969 TDRAHRIGQSKTVQVYRIIAKNTIEERVCQVQNQKQELVKKTL 1011
>sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens
GN=CHD1L PE=1 SV=2
Length = 897
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 243/506 (48%), Gaps = 57/506 (11%)
Query: 148 RAIASASAAPDLREKYDQIPAHIESKLLPFQRDGV-----RFALQHGGRILLADEMGLGK 202
RA A+ DLR+ + H+ S +Q +GV RF Q+G +L DEMGLGK
Sbjct: 25 RAEAARVQEQDLRQ-WGLTGIHLRS----YQLEGVNWLAQRFHCQNG--CILGDEMGLGK 77
Query: 203 TIQAIAV----ATCFRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNR 258
T Q IA+ A D P LIL P S+ +W +Q++ P V
Sbjct: 78 TCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMQRF--APGLSCVTY--------- 126
Query: 259 SGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQA-- 314
+G + ++++ + F+++ +Y++ LK + L S + +++ DE+H LKN +
Sbjct: 127 AGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLL 186
Query: 315 KRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVY--KNVHEYGNRYCKGGV 372
+T + ++ ++LLL+GTP + EL+ L + PD++ + V ++ RY
Sbjct: 187 HKTLSEFSVV----FSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQD--- 239
Query: 373 FGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFR 431
I + + + ELH L++ ++RR+K +V +LP K ++ ++ + A L +
Sbjct: 240 --IEKESESASELHKLLQP-FLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYKAILMK 296
Query: 432 ELEVVKGKI-KACKSEEEVQSLK--FTEKNLINKI---------YTDSAEAKIPAVLDYL 479
+L+ + + K K + + L+ L + + + A K+ + L
Sbjct: 297 DLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLL 356
Query: 480 ETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK 539
+ G + L+F+ MLD + + R+DG R + F ++ +
Sbjct: 357 AFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IF 415
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+LS +AGGVG+ LTAA TVIF + + P + +QA RAHRIGQ SV V L+ DTV
Sbjct: 416 VFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTV 475
Query: 600 DDIVWDVVRSKLENLGQVLDGHENSL 625
++IV+ SKL+ +++G +L
Sbjct: 476 EEIVYRKAASKLQLTNMIIEGGHFTL 501
>sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase ISW1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW1 PE=1
SV=2
Length = 1129
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 234/501 (46%), Gaps = 39/501 (7%)
Query: 162 KYDQIPAHIESKLLPFQRDGVRFALQ-HGGRI--LLADEMGLGKTIQAIAVATCFRDV-- 216
++ + PA++ +L P+Q GV + + H +I +LADEMGLGKT+Q I+ R +
Sbjct: 184 QFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEK 243
Query: 217 --WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPL 274
P L++ P S +W I +W P + L G ++ K+ +
Sbjct: 244 IPGPFLVIAPKSTLNNWLREINRW--TPDVNAFI----LQGDKEERAELIQ---KKLLGC 294
Query: 275 DGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLS 334
D I SY+++++ ++ L N++ +I DE+H +KN ++ + + + LL++
Sbjct: 295 DFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNR--LLIT 352
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVM 394
GTP + EL+ L L PD++ + ++ + + ++LH +++ +
Sbjct: 353 GTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIV--KQLHTVLQP-FL 409
Query: 395 IRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF-RELEVVKGKIKACKSEEEVQSLK 453
+RR+K DV L K+ +++ ++ + + ++L+ V G + +S+ + ++
Sbjct: 410 LRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIM 469
Query: 454 FTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFAHHQP 497
+ N Y D AE P D L+ + E G + LIF+
Sbjct: 470 MQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSR 529
Query: 498 MLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTA 556
+LD + + RIDG T R + ++ D K +L+ +AGG+G+ LT+
Sbjct: 530 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTS 589
Query: 557 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQ 616
A V+ + W P +QA DRAHRIGQ V V+ L+ +++V++ + + KL
Sbjct: 590 ADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQL 649
Query: 617 VLDGHENSLEVSSSQIRSSPA 637
V+ + SL+ ++ S A
Sbjct: 650 VIQQNRTSLKKKENKADSKDA 670
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 224/500 (44%), Gaps = 68/500 (13%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VATCFR 214
K+D+ P +I+S L P+Q +G+ RF+ G +LADEMGLGKT+Q I + + ++
Sbjct: 685 KFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYK 744
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN-------------- 257
+ P L+ P S ++W + W P VV + S
Sbjct: 745 EGHSKGPYLVSAPLSTIINWEREFEMWA---PDFYVVTYTGDKESRSVIRENEFSFEDNA 801
Query: 258 -RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
RSG + + I L + SY+++ Q IL S + ++ DE+H LKN Q+K
Sbjct: 802 IRSGKKVFRMKKEVQIKFHVL--LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKF 859
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + K Y LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 860 FRVLNSY----KIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEE------FA 909
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF---R 431
++LH+L+ M+RRLK DV +P K V +++++ M++ Y F R
Sbjct: 910 DISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSQ--MQKKYYKFILTR 966
Query: 432 ELEVVKGK--------------IKACKSEEEVQSLKFTEKNLI-NKIYTDSAEAKIPAVL 476
E + K +K C + + + E ++ N Y S+ K L
Sbjct: 967 NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKL 1026
Query: 477 DYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEF 532
L+ ++ + G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1027 MLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF 1086
Query: 533 QEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVY 591
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1087 NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY 1146
Query: 592 YLLANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1147 RFVTRASVEERITQVAKRKM 1166
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 231/481 (48%), Gaps = 61/481 (12%)
Query: 187 QHGGRILLADEMGLGKTIQAIAVATC---FRDV-WPVLILTPSSLRLHWAAMIQQWLNIP 242
++G +LADEMGLGKT+Q IA+ +R++ P ++L P S +W ++W+
Sbjct: 199 ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWV--- 255
Query: 243 PSEIVVVLSQLGGSN-RSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIV 301
PS V+ +G + R+ F +P + + SY++V+K +++ +++ +
Sbjct: 256 PSLRVICF--VGDKDARAAFI-----RDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYL 308
Query: 302 IADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVH 361
+ DE+H +KN ++K + K+ LLL+GTP + EL+ L L PDV+ +
Sbjct: 309 VIDEAHRIKNEKSKLSEIVREF--KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 366
Query: 362 EYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEK 421
++ + + G + E LH ++K ++RR+K DV LP K+ +++L ++ K
Sbjct: 367 DFDSWFDTKNCLGDQKLV---ERLHAVLKP-FLLRRIKTDVEKSLPPKKEIKIYLGLS-K 421
Query: 422 DMRQIYA--LFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYT-DSAEAKIPAVLD- 477
R+ Y L ++++V+ K K + ++ + N Y D AE P D
Sbjct: 422 MQREWYTKILMKDIDVLNSSGKMDKMR--LLNILMQLRKCCNHPYLFDGAEPGPPYTTDE 479
Query: 478 --------------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
L + E G + LIF+ +LD + + + R+DG TP
Sbjct: 480 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 539
Query: 524 SRQALVTEFQ---EKDDVKAA----------VLSMKAGGVGLTLTAASTVIFAELSWTPG 570
R+ E + +++ ++A +LS +AGG+G+ L +A VI + W P
Sbjct: 540 EREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 599
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLE------NLGQVLDGHENS 624
+QA DRAHRIGQ V V+ L+ ++TV++ + + KL G+++D N
Sbjct: 600 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 659
Query: 625 L 625
L
Sbjct: 660 L 660
>sp|O14981|BTAF1_HUMAN TATA-binding protein-associated factor 172 OS=Homo sapiens GN=BTAF1
PE=1 SV=2
Length = 1849
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 144/565 (25%), Positives = 228/565 (40%), Gaps = 135/565 (23%)
Query: 161 EKYDQIPAHIESKLLPFQRDGVR---FALQHGGRILLADEMGLGKTIQAIAVAT---CFR 214
E Y +IP I ++L +Q+DGV F ++ +L D+MGLGKT+Q+I + C R
Sbjct: 1254 ENY-KIPVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHR 1312
Query: 215 DV------------WPVLILTPSSLRLHWAAMI-----QQWLNI-----PPSEIVVVLSQ 252
P L++ P +L HW + +++LN PP+E + + Q
Sbjct: 1313 AQEYARSKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQ 1372
Query: 253 LGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA 312
+ N + SYDVV + + F I DE H +KN
Sbjct: 1373 VKRHN--------------------LIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNG 1412
Query: 313 QAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGV 372
+ K + A + A Y ++LSGTP + +EL+ + L P ++ RY K +
Sbjct: 1413 KTKLSKAVKQLT--ANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPIL 1470
Query: 373 FGIYQGASNHEELHNLMKATV--------MIRRLKKDVLAQLPVKRRQQVFLDVAEKDMR 424
+S+ E+ ++ ++RR+K+DVL LP K Q + ++ +
Sbjct: 1471 ASRDARSSSREQEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQV- 1529
Query: 425 QIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIE 484
Q+Y F K + K C +E V S +E+ K+ A + L YL +
Sbjct: 1530 QLYEDF-----AKSRAK-CDVDETVSSATLSEETEKPKL---KATGHVFQALQYLRKLCN 1580
Query: 485 AGCKFLIFAH---------------------HQPMLDAIHQLFL---------------- 507
L H H P L A+ QL L
Sbjct: 1581 HPALVLTPQHPEFKTTAEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTES 1640
Query: 508 -----KKKVHC-----------------------IRIDGGTPPASRQALVTEFQEKDDVK 539
+ + C +R+DG PP R ++V+ F +
Sbjct: 1641 VVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSID 1700
Query: 540 AAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV 599
+L+ GG+GL LT A TV+F E W P +QA DRAHRIGQ VNVY L+ T+
Sbjct: 1701 VLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTL 1760
Query: 600 DDIVWDVVRSKLENLGQVLDGHENS 624
++ + + + K+ N+ + ENS
Sbjct: 1761 EEKIMGLQKFKM-NIANTVISQENS 1784
>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis
thaliana GN=PKL PE=1 SV=1
Length = 1384
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 139/529 (26%), Positives = 239/529 (45%), Gaps = 63/529 (11%)
Query: 130 SEISGYNVEIENLHPLVQRAIASASA----APDLREKYDQIPAHIESKLLPFQRDGV--- 182
S+IS + EI+ + R S P +++D P ++ L P+Q +G+
Sbjct: 225 SDISTFQNEIQRFKDVNSRTRRSKDVDHKRNPRDFQQFDHTPEFLKGLLHPYQLEGLNFL 284
Query: 183 RFALQHGGRILLADEMGLGKTIQAIA-VATCF-RDVWPVLILTPSSLRLHWAAMIQQW-- 238
RF+ ++LADEMGLGKTIQ+IA +A+ F ++ P L++ P S +W W
Sbjct: 285 RFSWSKQTHVILADEMGLGKTIQSIALLASLFEENLIPHLVIAPLSTLRNWEREFATWAP 344
Query: 239 -LN-------------IPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYD 284
+N I E + Q + I S + ++ I D L + SY+
Sbjct: 345 QMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVL--LTSYE 402
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIE 344
++ +L ++ +I DE H LKN +K ++ + + +LL+GTP + E
Sbjct: 403 MINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQY--SSNHRILLTGTPLQNNLDE 460
Query: 345 LFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMK--ATVMIRRLKKDV 402
LF + L + ++ E+ ++ + E++ L K A ++RR+KKDV
Sbjct: 461 LFMLMHFLDAGKFGSLEEFQEE---------FKDINQEEQISRLHKMLAPHLLRRVKKDV 511
Query: 403 LAQLPVKRRQQVFLDVAEKDMRQIYALF-RELEVVKGKIKACKSEEEVQSLKFTEKNLIN 461
+ +P K+ + +D++ A+F R +V+ K A S + ++ + +
Sbjct: 512 MKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVLTKKGGAQIS---LNNIMMELRKVCC 568
Query: 462 KIYT---------DSAEA---------KIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIH 503
Y D+ EA K+ + + + E G + LI+ Q MLD +
Sbjct: 569 HPYMLEGVEPVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLE 628
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVK-AAVLSMKAGGVGLTLTAASTVIF 562
KK RIDG A RQ + F K+ K +LS +AGG+G+ L A TVI
Sbjct: 629 DYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVII 688
Query: 563 AELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ W P +QA RAHR+GQ + V +Y L+ T+++ + + + K+
Sbjct: 689 YDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKM 737
>sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio
GN=chd1l PE=2 SV=1
Length = 1026
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 224/470 (47%), Gaps = 60/470 (12%)
Query: 174 LLPFQRDGVRF---ALQHGGRILLADEMGLGKTIQAIAVATCFRDVW----PVLILTPSS 226
L P+Q DGV++ +++ +L DEMGLGKT Q I++ R P L+L P +
Sbjct: 35 LRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLVLCPLA 94
Query: 227 LRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--SYD 284
+ +W ++++ PS V+ + G + ++N+ D F+++ +Y+
Sbjct: 95 VLENWRQELERFC---PSLSVICYT--------GDKEKRAELQQNLKSDPRFHVLLTTYE 143
Query: 285 VVLKLQNILMSSNFKIVIADESHFLKNAQA--KRTAATLPIIKKAQYALLLSGTPALSRP 342
+ LK L S +KI++ DE+H LKN ++ +T + + +LL+GTP +
Sbjct: 144 MCLKDARYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFTV----GFRVLLTGTPIQNNL 199
Query: 343 IELFKQLEALYPDVY--KNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKK 400
E++ L + P V+ + V ++ N Y I + +ELH +++ ++RR+K
Sbjct: 200 QEVYSLLTFIQPSVFLPEAVEDFVNAYAD-----IQTEPALVDELHQVLQP-FLLRRVKA 253
Query: 401 DVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFRELEVVKG-------------KIKACKSE 446
+V A+LP K VF ++ R A L R+L+ + +++ C
Sbjct: 254 EVAAELPKKTELVVFHGLSALQKRYYKAILMRDLDAFRTDQSTKTRLLNVLMQLRKCVDH 313
Query: 447 ----EEVQSLKF-TEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDA 501
+ V+ F ++L+ A K+ + L + E G L+F+ MLD
Sbjct: 314 PYLFDGVEPEPFEMGEHLVE------ASGKLSLLDSMLAYLQEGGHHVLLFSQMTRMLDI 367
Query: 502 IHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVI 561
+ + R+DG R + F K DV +LS KAGGVG+ LTAA TVI
Sbjct: 368 LQDYLEYRGYSYERLDGSVRGEERNLAIKNFSTK-DVFIFLLSTKAGGVGMNLTAADTVI 426
Query: 562 FAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
F + + P + +QA RAHRIGQ V V LL DT+++I++ SKL
Sbjct: 427 FVDGDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKL 476
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 213/474 (44%), Gaps = 76/474 (16%)
Query: 193 LLADEMGLGKTIQAIAVATCF----RDVWPVLILTPSSLRLHWAAMIQQW--------LN 240
+LADEMGLGKTIQ IA T P LI+ P S +W ++W
Sbjct: 891 ILADEMGLGKTIQTIAFITYLIEKKNQQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYK 950
Query: 241 IPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNF 298
PP + SQ+ SN FN++ +++ ++K + +L +
Sbjct: 951 GPPQLRKTLQSQIRSSN--------------------FNVLLTTFEYIIKDRPLLSRIKW 990
Query: 299 KIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYK 358
+I DE H +KN Q+K T+ TL +QY L+L+GTP + EL+ L + P ++
Sbjct: 991 VHMIIDEGHRIKNTQSKLTS-TLSTYYHSQYRLILTGTPLQNNLPELWALLNFVLPKIFN 1049
Query: 359 NVHEYGNRYCK--GGVFGIYQGASNHEE-------LHNLMKATVMIRRLKKDVLAQLPVK 409
++ + + G + N EE LH +++ + RRLKKDV +LP K
Sbjct: 1050 SIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKRLHKVLRP-FLFRRLKKDVEKELPDK 1108
Query: 410 RRQQVFLDVAE------KDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINK- 462
+ + ++ + M++ LF + E K IK +Q+ K + N
Sbjct: 1109 VEKVIKCPLSGLQLKLYQQMKKHGMLFVDGEKGKTGIKG------LQNTVMQLKKICNHP 1162
Query: 463 -IYTDSAEAKIPA---------------VLDY-LETVIEAGCKFLIFAHHQPMLDAIHQL 505
I+ D A P+ +LD L + G K L+F ++ +
Sbjct: 1163 FIFEDVERAIDPSGTNVDLLWRAAGKFELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDY 1222
Query: 506 FLKKKVHCIRIDGGTPPASRQALVTEFQE-KDDVKAAVLSMKAGGVGLTLTAASTVIFAE 564
K +R+DG T R +L+ +F + K DV +LS +AGG+GL L A TVI +
Sbjct: 1223 LRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQTADTVIIFD 1282
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
W P +QA+DRAHRIGQ V + L+ ++++ + + KL+ G+V+
Sbjct: 1283 TDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSIEENILSRAQYKLDLDGKVI 1336
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1
SV=1
Length = 1120
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/479 (27%), Positives = 227/479 (47%), Gaps = 56/479 (11%)
Query: 167 PAHIES-KLLPFQRDGVRFALQ-HGGRI--LLADEMGLGKTIQAIAVATCFRDV----WP 218
P+ ++S KL +Q G+ + + H ++ +LADEMGLGKT+Q I+ R V P
Sbjct: 176 PSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGP 235
Query: 219 VLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
LI+ P S +W +W P+ V+VL G + IV RNI L+ F
Sbjct: 236 FLIIVPKSTLDNWRREFLKW---TPNVNVLVLH---GDKDTRADIV-----RNIILEARF 284
Query: 279 NII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK--KAQYALLLS 334
+++ SY++V++ +N L ++ ++ DE+H +KN Q+ A II+ ++ LL++
Sbjct: 285 DVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQS----ALSQIIRLFYSKNRLLIT 340
Query: 335 GTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHE----ELHNLMK 390
GTP + EL+ L L PD++ G+ F + E +LH+++
Sbjct: 341 GTPLQNNLHELWALLNFLLPDIF------GDSELFDEWFEQNNSEQDQEIVIQQLHSVLN 394
Query: 391 ATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYALF-RELEVVKGKIKACKSEEEV 449
++RR+K DV L K V++ + + ++ +L ++++ V G + + + +
Sbjct: 395 P-FLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRL 453
Query: 450 QSLKFTEKNLINKIYT-DSAEAKIPAVLD---------------YLETVIEAGCKFLIFA 493
++ + N Y + AE P D L+ + E G + LIF+
Sbjct: 454 LNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLIFS 513
Query: 494 HHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGL 552
+LD + + RIDG T R + E+ + + K +L+ +AGG+G+
Sbjct: 514 QMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGI 573
Query: 553 TLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
L A TVI + W P +QA DRAHRIGQ V+VY + + +++ V + KL
Sbjct: 574 NLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKL 632
>sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus
GN=CHD1L PE=2 SV=1
Length = 897
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 234/486 (48%), Gaps = 64/486 (13%)
Query: 174 LLPFQRDGVR-----FALQHGGRILLADEMGLGKTIQAIAV----ATCFRDVWPVLILTP 224
L P+Q GV F Q+G +L DEMGLGKT Q IA+ A D P LIL P
Sbjct: 48 LRPYQLQGVNWLAQCFHCQNG--CILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCP 105
Query: 225 SSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--S 282
S+ +W ++++ P V +G + ++++ + F+++ +
Sbjct: 106 LSVLSNWKEEMERF--APGLSCVTY---------AGDKDKRACLQQDLKQESRFHVLLTT 154
Query: 283 YDVVLKLQNILMSSNFKIVIADESHFLKNAQA--KRTAATLPIIKKAQYALLLSGTPALS 340
Y++ LK + L S + +++ DE+H LKN + +T + ++ ++LLL+GTP +
Sbjct: 155 YEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVV----FSLLLTGTPIQN 210
Query: 341 RPIELFKQLEALYPDVY--KNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRL 398
EL+ L + PD++ + V ++ RY I + + + EL+ L++ ++RR+
Sbjct: 211 SLQELYSLLSFVEPDLFSKEQVEDFVQRYQD-----IEKESESASELYKLLQP-FLLRRV 264
Query: 399 KKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFRELEVVKGKI-KACKSEEEVQSLKFTE 456
K +V +LP K ++ ++ + A L ++L+ + + K K + + L+
Sbjct: 265 KAEVATELPRKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNVLSQLR--- 321
Query: 457 KNLINKIYTDSAEAKIPAVLDYLETVIEA-----------------GCKFLIFAHHQPML 499
K + + D E + + D+L IEA G + L+F+ ML
Sbjct: 322 KCVDHPYLFDGVEPEPFEIGDHL---IEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQML 378
Query: 500 DAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAST 559
D + + R+DG R + F ++ + +LS +AGGVG+ LTAA T
Sbjct: 379 DILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IFTFLLSTRAGGVGMNLTAADT 437
Query: 560 VIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLD 619
VIF + + P + +QA RAHRIGQ SV V L+ DTV++IV+ SKL+ +++
Sbjct: 438 VIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTIIE 497
Query: 620 GHENSL 625
G +L
Sbjct: 498 GGHFTL 503
>sp|P75093|Y020_MYCPN Uncharacterized ATP-dependent helicase MPN_020 OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=MPN_020 PE=3
SV=1
Length = 1030
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 144/535 (26%), Positives = 244/535 (45%), Gaps = 71/535 (13%)
Query: 118 PVPFLSSAEKVLSEISGYNVEIENLH--PLVQRAIASASAAPDLREKYDQIPAHIESKLL 175
P +L K+ S+ ++I+NL P +++ + DL ++ +I + L
Sbjct: 529 PKYYLFEVAKIFSQY----LDIKNLFDVPTIKKIEDQNNNVFDLSLEHKKITS-----LR 579
Query: 176 PFQRDGVRFAL-----QHGGRILLADEMGLGKTIQAI-AVATCFRDV---WPVLILTPSS 226
+Q++GV++ + GG +LADEMGLGKT+Q I A+ + P LI+ P+S
Sbjct: 580 NYQQEGVKWIRGLEENKFGG--ILADEMGLGKTVQVIFALLDSYLKNHVNLPSLIIVPAS 637
Query: 227 LRLHWAAMIQQWL--------NIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLF 278
L L+W + +++ NIP E + +L IVS F
Sbjct: 638 LLLNWKSEFEKFAPQIKVKVANIPSKERGELYEKLTNE----ILIVS------------F 681
Query: 279 NIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPA 338
N++ DV L + F V+ DE+ +KN + T A + K + L L+GTP
Sbjct: 682 NVLRSDVKL-----ITKQRFHYVVIDEAQGIKNDSSSITKAAKKV--KGNFCLALTGTPI 734
Query: 339 LSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKAT--VMIR 396
+R ++L+ + + P N ++ +++ K + H LM+ T ++R
Sbjct: 735 ENRLLDLWSCFDFVLPSFLGNKKQFTDQFEK---------EKTDQSFHLLMQRTSPFILR 785
Query: 397 RLKKDVLAQLPVKRRQQVFLDVAEKDMRQ-IYALFRELEVVKGKIKACKSEEEVQSLKFT 455
R K VL +LP K +++++ M Q +Y R+ + + K KS + +L
Sbjct: 786 RTKSKVLKELPNKITTDIYVEL--NPMHQKLYEEERDRGLEEIKQIQDKSSFNILTLILK 843
Query: 456 EKNLI----NKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKV 511
++L N AK A L+ + IE K ++F ++D F ++ +
Sbjct: 844 LRHLCSLPKNSQGILENSAKKEAALEIIHEAIENQRKIILFTQFIDVIDHFKDTFKEQGI 903
Query: 512 HCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
DG P SR +++ +F + + S+KAGGVG+ LTAA VI ++ W
Sbjct: 904 EYFIFDGRKSPKSRHSIIEKFNNAKNPCVLLASLKAGGVGINLTAAEVVIHFDVWWNTAV 963
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVLDGHENSLE 626
QA DRAHRIGQ +V VY ++A +T+++ V V K E + + L N E
Sbjct: 964 ENQATDRAHRIGQKKTVQVYRIIAKNTIEERVCQVQAEKQELVSKTLVEDVNFFE 1018
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 240/534 (44%), Gaps = 70/534 (13%)
Query: 133 SGYNVEIEN-LHPLVQRAIASASAAPDLREKYDQIPA-HIESKLLPFQRDGVRFALQHGG 190
S Y+ +++ ++P R I + A ++RE + P+ + KL +Q G+++ +
Sbjct: 374 SAYDEDMDRRMNPEDDRKIDYYNVAHNIREVVTEQPSILVGGKLKEYQLRGLQWMISLYN 433
Query: 191 RIL---LADEMGLGKTIQAIAVATCF----RDVWPVLILTPSSLRLHWAAMIQQW----- 238
L LADEMGLGKTIQ I++ T R P L++ P S +W ++W
Sbjct: 434 NHLNGILADEMGLGKTIQTISLITHLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIV 493
Query: 239 ---LNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMS 295
PP + Q+ SN F ++ + +Y+ ++K + +L
Sbjct: 494 KIVYKGPPQVRKALHPQVRHSN---FQVL---------------LTTYEYIIKDRPLLSR 535
Query: 296 SNFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPD 355
+ +I DE H +KN Q+K T TL ++Y L+L+GTP + EL+ L + P
Sbjct: 536 IKWIYMIIDEGHRMKNTQSKLTN-TLTTYYSSRYRLILTGTPLQNNLPELWALLNFVLPR 594
Query: 356 VYKNVHEYGNRYCKGGVFGIYQGASNHE-----------ELHNLMKATVMIRRLKKDVLA 404
++ ++ + + F G E LH +++ ++RRLKKDV A
Sbjct: 595 IFNSIKSFDEWF--NTPFANTGGQDKMELTEEESLLVIRRLHKVLRP-FLLRRLKKDVEA 651
Query: 405 QLPVKRRQQVFLDVAEKDMRQIYALFRE-LEVVKGKIKACKSEEEVQSLKFTEKNLINK- 462
+LP K + + ++ + Y + + + V+ + + +Q+ K + N
Sbjct: 652 ELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKTGIKGLQNTVMQLKKICNHP 711
Query: 463 -IYTDSAEAKIPAVLDY----------------LETVIEAGCKFLIFAHHQPMLDAIHQL 505
++ D + P +Y L + +G + L+F +++ +
Sbjct: 712 FVFEDVERSIDPTGFNYDMLWRVSGKFELLDRILPKLFRSGHRILMFFQMTQIMNIMEDY 771
Query: 506 FLKKKVHCIRIDGGTPPASRQALVTEFQEKD-DVKAAVLSMKAGGVGLTLTAASTVIFAE 564
++ +R+DG T R L+ F + +V +LS +AGG+GL L A TVI +
Sbjct: 772 LHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQTADTVIIFD 831
Query: 565 LSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
W P +QA+DRAHRIGQ V +Y L+ +V++ + + KL+ G+V+
Sbjct: 832 SDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGKVI 885
>sp|Q03468|ERCC6_HUMAN DNA excision repair protein ERCC-6 OS=Homo sapiens GN=ERCC6 PE=1
SV=1
Length = 1493
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 215/489 (43%), Gaps = 62/489 (12%)
Query: 165 QIPAHIESKLLPFQRDGVRF-----ALQHGGRILLADEMGLGKTIQAIAVATC------- 212
++P + KL +Q+ GVR+ Q GG +L DEMGLGKTIQ IA
Sbjct: 498 KVPGFLFKKLFKYQQTGVRWLWELHCQQAGG--ILGDEMGLGKTIQIIAFLAGLSYSKIR 555
Query: 213 -------FRDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVS 265
F + P +I+ P+++ W W PP V +L + G +T
Sbjct: 556 TRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWW--PPFR-VAILHETGS-----YTHKK 607
Query: 266 SNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIK 325
R++ I SY + +Q+ + ++ VI DE H ++N A T A
Sbjct: 608 EKLIRDVAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQF-- 665
Query: 326 KAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGAS----- 380
+ + ++LSG+P + EL+ + ++P + + ++ G Y AS
Sbjct: 666 RTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVK 725
Query: 381 NHEELHNLMKATV---MIRRLKKDVLAQL--PVKRRQQVFLDVAEK---------DMRQI 426
+ +++ T+ ++RR+K DV L P K Q +F + ++ D +++
Sbjct: 726 TAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEV 785
Query: 427 YALFR-ELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAE----------AKIPAV 475
Y + E+++ G I K KNL + D E K+ V
Sbjct: 786 YRILNGEMQIFSGLIALRKICNHPDLFSGGPKNL-KGLPDDELEEDQFGYWKRSGKMIVV 844
Query: 476 LDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEK 535
L+ + G + L+F+ + MLD + +K +++DG T ASRQ L+T + E
Sbjct: 845 ESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNED 904
Query: 536 DDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLA 595
+ +L+ + GG+G+ LT A+ V+ + W P QA +RA RIGQ V VY LL
Sbjct: 905 TSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLT 964
Query: 596 NDTVDDIVW 604
T+++ ++
Sbjct: 965 AGTIEEKIY 973
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis
elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 140/504 (27%), Positives = 213/504 (42%), Gaps = 68/504 (13%)
Query: 158 DLREKYDQIPAHIE---SKLLPFQRDGV---RFALQHGGRILLADEMGLGKTIQAIA-VA 210
D+ +KY+ P I L P+Q +G+ R +G +LADEMGLGKT+Q++ +
Sbjct: 597 DILKKYEVQPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLY 656
Query: 211 TCFRD---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVV---------------LSQ 252
T ++ P LI P S ++W + W P VV S
Sbjct: 657 TLMKEGHTKGPFLIAAPLSTIINWEREAELWC---PDFYVVTYVGDRESRMVIREHEFSF 713
Query: 253 LGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNA 312
+ G+ R G + T N+ L + SY+ + + IL S ++ ++ DE+H LKN
Sbjct: 714 VDGAVRGGPKVSKIKTLENLKFHVL--LTSYECINMDKAILSSIDWAALVVDEAHRLKNN 771
Query: 313 QAK--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKG 370
Q+ + I QY +LL+GTP + ELF L L PD + + +
Sbjct: 772 QSTFFKNLREYNI----QYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFT------ 821
Query: 371 GVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYAL- 429
F E+LHNL+ M+RRLK DVL +P K Q++ + V M++ Y
Sbjct: 822 AEFSEISKEDQIEKLHNLL-GPHMLRRLKADVLTGMPSK--QELIVRVELSAMQKKYYKN 878
Query: 430 -----FRELEVVKGKI------------KACKSEEEVQSLKFTEKNLINKIYTDSA---- 468
F L V G K C L N +Y SA
Sbjct: 879 ILTRNFDALNVKNGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKN 938
Query: 469 EAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQAL 528
K + L + + G + LIF+ MLD + + RIDG RQ
Sbjct: 939 AGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDA 998
Query: 529 VTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSS 587
+ + + +LS +AGG+G+ L A TVI + W P + IQA RAHR+GQ
Sbjct: 999 IDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHK 1058
Query: 588 VNVYYLLANDTVDDIVWDVVRSKL 611
V +Y + +V++ + V + K+
Sbjct: 1059 VMIYRFVTKGSVEERITSVAKKKM 1082
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila
melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 225/520 (43%), Gaps = 60/520 (11%)
Query: 137 VEIENLHPLVQRAIASASAAPDLREKYDQIPAHIES---KLLPFQRDGV---RFALQHGG 190
VE + P+ DL++KY+ PA +E +L P+Q +G+ R++ G
Sbjct: 690 VEDDEDRPVKHYTPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGI 749
Query: 191 RILLADEMGLGKTIQAIA-VATCFRD---VWPVLILTPSSLRLHWAAMIQQW-------- 238
+LADEMGLGKTIQ + + + +++ P L+ P S ++W + W
Sbjct: 750 DTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCIT 809
Query: 239 -LNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMS 295
+ S V+ ++L S G I S R FN++ SY+++ L S
Sbjct: 810 YIGDKDSRAVIRENEL--SFEEG-AIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGS 866
Query: 296 SNFKIVIADESHFLKNAQAK--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALY 353
++ +++ DE+H LK+ Q+K R + I Y LLL+GTP + ELF L L
Sbjct: 867 IDWAVLVVDEAHRLKSNQSKFFRILNSYTIA----YKLLLTGTPLQNNLEELFHLLNFLS 922
Query: 354 PDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRR-- 411
D + ++ + G F + LH ++ M+RRLK DVL +P K
Sbjct: 923 RDKFNDLQAF------QGEFADVSKEEQVKRLHEML-GPHMLRRLKTDVLKNMPSKSEFI 975
Query: 412 QQVFLDVAEKDMRQIYALFRELEVVKGKI---------------KACKSEEEVQSLKFTE 456
+V L +K + + L + E + K K C S
Sbjct: 976 VRVELSAMQKKFYK-FILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEA 1034
Query: 457 KNLINKIYT----DSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH 512
+Y A K+ + L+ + + LIF+ MLD + ++
Sbjct: 1035 TTAAGGLYEINSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYK 1094
Query: 513 CIRIDGGTPPASRQALVTEFQEKDDVK-AAVLSMKAGGVGLTLTAASTVIFAELSWTPGD 571
RIDGG RQ + F + +LS +AGG+G+ L A TVI + W P +
Sbjct: 1095 YERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHN 1154
Query: 572 LIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
IQA RAHRIGQ + V +Y + ++V++ V V + K+
Sbjct: 1155 DIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKM 1194
>sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus
GN=Chd1l PE=2 SV=1
Length = 900
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 228/482 (47%), Gaps = 64/482 (13%)
Query: 173 KLLPFQRDGVR-----FALQHGGRILLADEMGLGKTIQAIAVATCF----RDVWPVLILT 223
+L +Q +GV F Q+G +L DEMGLGKT Q IA+ D P L+L
Sbjct: 39 RLRSYQLEGVNWLVQCFHCQNG--CILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLVLC 96
Query: 224 PSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII-- 281
P S+ +W ++++ P V +G + ++++ + F+++
Sbjct: 97 PLSVLSNWKEEMERF--APGLSCVTY---------TGDKEERARLQQDLRQESGFHVLLT 145
Query: 282 SYDVVLKLQNILMSSNFKIVIADESHFLKNAQA--KRTAATLPIIKKAQYALLLSGTPAL 339
+Y++ LK + L S ++ ++ DE+H LKN + RT + + + LLL+GTP
Sbjct: 146 TYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAV----FRLLLTGTPIQ 201
Query: 340 SRPIELFKQLEALYPDVY--KNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRR 397
+ EL+ L + PD++ + V ++ RY I + + + ELH L++ ++RR
Sbjct: 202 NSLRELYSLLCVVEPDLFCREQVEDFVQRYQD-----IEKESKSASELHRLLQP-FLLRR 255
Query: 398 LKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA-LFRELEVVKGKIKACKSEEEVQSLKFTE 456
+K V +LP K V+ ++ + A L ++L+ + + + ++Q++
Sbjct: 256 VKAQVATELPKKTEVVVYHGMSALQKKYYKAILMKDLDAFENETA---KKVKLQNILTQL 312
Query: 457 KNLINKIYT-DSAEAKIPAVLDYLETVIEA-----------------GCKFLIFAHHQPM 498
+ ++ Y D E P + E +IEA G + L+F+ M
Sbjct: 313 RKCVDHPYLFDGVE---PEPFEVGEHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMTHM 369
Query: 499 LDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAAS 558
LD + + R+DG R + F + + +LS +AGGVG+ LTAA
Sbjct: 370 LDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGNQP-IFVFLLSTRAGGVGMNLTAAD 428
Query: 559 TVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
TVIF + + P + +QA RAHRIGQ SV V L+ DTV++IV+ SKL+ V+
Sbjct: 429 TVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVI 488
Query: 619 DG 620
+G
Sbjct: 489 EG 490
>sp|B6ZLK2|CHD1_CHICK Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus
GN=CHD1 PE=1 SV=1
Length = 1719
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 222/486 (45%), Gaps = 54/486 (11%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQH----GGRILLADEMGLGKTIQAIA-VATCF 213
L+++ I H +L +Q +G+ + L H G +LADEMGLGKTIQ I+ + F
Sbjct: 462 LKKQPSYIGGHESLELRDYQLNGLNW-LAHSWCKGNSCILADEMGLGKTIQTISFLNYLF 520
Query: 214 RD---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNR-SGFTIVSSNTK 269
+ P L++ P S W IQ W P VV L + N + TK
Sbjct: 521 HEHQLYGPFLLVVPLSTLTSWQREIQTW--APQMNAVVYLGDITSRNMIRTHEWMHPQTK 578
Query: 270 RNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKA 327
R FNI+ +Y+++LK ++ L N+ + DE+H LKN + + K+
Sbjct: 579 R-----LKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDF--KS 631
Query: 328 QYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHN 387
+ LL++GTP + EL+ L + P+ + + ++ + KG +G AS H+EL
Sbjct: 632 NHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYGY---ASLHKEL-- 686
Query: 388 LMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKS 445
++RR+KKDV LP K Q + ++++ +Q Y L R + + K S
Sbjct: 687 ---EPFLLRRVKKDVEKSLPAKVEQILRMEMSAL-QKQYYKWILTRNYKALSKGSKGSTS 742
Query: 446 EEEVQSLKFTEKNLINKIY-----TDSAEAKIPAVLDYL--------------ETVIEAG 486
++ K N Y D+ L +L + E G
Sbjct: 743 --GFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERG 800
Query: 487 CKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQ-EKDDVKAAVLSM 545
+ LIF+ MLD + + ++ R+DG R+ + F E + +LS
Sbjct: 801 NRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLST 860
Query: 546 KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWD 605
+AGG+G+ L +A TV+ + W P + +QA+ RAHRIGQ VN+Y L+ +V++ + +
Sbjct: 861 RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILE 920
Query: 606 VVRSKL 611
+ K+
Sbjct: 921 RAKKKM 926
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 231/484 (47%), Gaps = 43/484 (8%)
Query: 192 ILLADEMGLGKTIQAIA-VATCFRD---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIV 247
++LADEMGLGKTIQ I+ ++ F P LI+ P S W + W P +V
Sbjct: 505 VILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIW--APEINVV 562
Query: 248 VVLSQLGGSNR-SGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADES 306
V + L N + + S TKR + + L I +Y+++LK + +L S N+ + DE+
Sbjct: 563 VYIGDLMSRNTIREYEWIHSQTKR-LKFNAL--ITTYEILLKDKTVLGSINWAFLGVDEA 619
Query: 307 HFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNR 366
H LKN + + K+ + LL++GTP + EL+ L + P+ ++ ++
Sbjct: 620 HRLKNDDSLLYKTLIDF--KSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEED 677
Query: 367 YCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQ--QVFLDVAEKD-- 422
+ KG G ++ LH +++ ++RR+KKDV LP K Q +V + +K
Sbjct: 678 HGKGRENG-------YQSLHKVLEP-FLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYY 729
Query: 423 ----MRQIYALFRE--------LEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTD--SA 468
R AL + L +V K C ++ + E+ +I +
Sbjct: 730 KWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLSLIRS 789
Query: 469 EAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQAL 528
K+ + L + E G + LIF+ MLD + + K R+DG R+
Sbjct: 790 SGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQA 849
Query: 529 VTEFQ-EKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSS 587
+ F + + +LS +AGG+G+ L +A TV+ + W P + +QA+ RAHRIGQ
Sbjct: 850 LDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQ 909
Query: 588 VNVYYLLANDTVDDIVWDVVRSK--LENLG-QVLDGHENS-LEVSSSQIRSSPAKQKTLD 643
VN+Y L+ TV++ + + + K L++L Q +D + LE +S + S+P ++ L
Sbjct: 910 VNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTILENNSGRSNSNPFNKEELT 969
Query: 644 SFLK 647
+ LK
Sbjct: 970 AILK 973
>sp|E7F1C4|SMRDB_DANRE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1B OS=Danio
rerio GN=smarcad1b PE=3 SV=1
Length = 954
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 136/541 (25%), Positives = 244/541 (45%), Gaps = 116/541 (21%)
Query: 173 KLLPFQRDGVRF-ALQHGGRI--LLADEMGLGKTIQAIA-VATCFRDV--WPVLILTPSS 226
+L P+Q G+ + L H ++ +LADEMGLGKTIQAI+ +A +++ P LI P+S
Sbjct: 428 QLKPYQLIGLNWLVLLHQNKLSGILADEMGLGKTIQAISFLAHLYQEGNHGPHLITVPAS 487
Query: 227 LRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVV 286
+W + W P +++V S++ ++ + + L I+ Y+++
Sbjct: 488 TLDNWVRELNLW--CPSFKVLVYYG-------------SADDRKYMRYEILNQIVEYNII 532
Query: 287 LKLQNILMSSN----------FKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGT 336
+ N+ + ++ + + DE H LKN + R + I A+Y LLL+GT
Sbjct: 533 VSTYNLAIGNSSDRSLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAI--NAKYRLLLTGT 590
Query: 337 PALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEE--------LH-N 387
P + +EL L + P+++ + + ++ S+ E+ H
Sbjct: 591 PLQNNLLELMSLLNFIMPNMFSS--------STSQIAKMFSMKSSEEQSSFERDRITHAK 642
Query: 388 LMKATVMIRRLKKDVLAQLPVK-----------RRQQVFLDVAEK-------DMRQIYAL 429
L+ ++RR+K +VL QLP K R+Q+++ + K + R++ +
Sbjct: 643 LIMKPFILRRVKSEVLKQLPAKEEQVEFCAMSERQQELYSALLHKLKHSSNGEKRELTNV 702
Query: 430 FRELEVVKG------------KIKAC------------------KSEEEV---------- 449
+L + K+KA K + EV
Sbjct: 703 MMQLRKMSNHPLLHRQFYTTEKLKAMSKLMLKEPSHRDADPALIKEDMEVLSDFELHRLC 762
Query: 450 -QSLKFTEKNLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLK 508
Q E L + DS K+ + L ++ E G + ++F+ MLD I ++FL+
Sbjct: 763 QQYSALHEYQLNTDVLLDSG--KLSLLTQLLNSLKEKGDRVVLFSQFTMMLD-ILEVFLR 819
Query: 509 KKVHCI-RIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSW 567
H R+DG TP + R L+ +F D+ +LS +AGG+G+ LT+A+ VI ++
Sbjct: 820 HHKHRYNRLDGSTPMSDRIGLIDQFNTDQDIFVFLLSTRAGGLGINLTSANVVILHDIDC 879
Query: 568 TPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL---ENLGQVLDGHENS 624
P + QAE R HR+GQ +V V L++ D+++D + + KL + + DG E++
Sbjct: 880 NPYNDKQAEGRCHRVGQTKTVKVIKLISKDSIEDTMLRIGERKLKLEQEMTATQDGEEDT 939
Query: 625 L 625
L
Sbjct: 940 L 940
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 139 bits (350), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 226/498 (45%), Gaps = 64/498 (12%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQ-AIAVATCFR 214
KY++ P ++++ L P+Q +G+ RF+ G +LADEMGLGKT+Q A+ + + ++
Sbjct: 704 KYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 763
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN------RSGFTI-- 263
+ P L+ P S ++W + W + + V++ +G + + F+
Sbjct: 764 EGHSKGPFLVSAPLSTIINWEREFEMW-----APDMYVVTYVGDKDSRAIIRENEFSFED 818
Query: 264 -------VSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
+S K+ + + SY+++ IL S ++ +I DE+H LKN Q+K
Sbjct: 819 NAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKF 878
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + Q+ LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 879 FRVLNGYSL----QHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEE------FA 928
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI-YALFREL 433
++LH+++ M+RRLK DV +P K V ++++ + Y L R
Sbjct: 929 DIAKEDQIKKLHDML-GPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNF 987
Query: 434 EVVKGK--------------IKACKSEEEVQSLKFTEK-NLINKIYTDSA----EAKIPA 474
E + + +K C + + + E + N +Y SA K+
Sbjct: 988 EALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLL 1047
Query: 475 VLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE 534
+ L+ + E G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1048 LQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNA 1107
Query: 535 KDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYL 593
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1108 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1167
Query: 594 LANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1168 VTRASVEERITQVAKKKM 1185
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 226/498 (45%), Gaps = 64/498 (12%)
Query: 162 KYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQ-AIAVATCFR 214
KY++ P ++++ L P+Q +G+ RF+ G +LADEMGLGKT+Q A+ + + ++
Sbjct: 711 KYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYK 770
Query: 215 D---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSN------RSGFTI-- 263
+ P L+ P S ++W + W + + V++ +G + + F+
Sbjct: 771 EGHSKGPFLVSAPLSTIINWEREFEMW-----APDMYVVTYVGDKDSRAIIRENEFSFED 825
Query: 264 -------VSSNTKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADESHFLKNAQAK- 315
+S K+ + + SY+++ IL S ++ +I DE+H LKN Q+K
Sbjct: 826 NAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKF 885
Query: 316 -RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFG 374
R + Q+ LLL+GTP + ELF L L P+ + N+ + F
Sbjct: 886 FRVLNGYSL----QHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEE------FA 935
Query: 375 IYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQI-YALFREL 433
++LH+++ M+RRLK DV +P K V ++++ + Y L R
Sbjct: 936 DIAKEDQIKKLHDML-GPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNF 994
Query: 434 EVVKGK--------------IKACKSEEEVQSLKFTEK-NLINKIYTDSA----EAKIPA 474
E + + +K C + + + E + N +Y SA K+
Sbjct: 995 EALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLL 1054
Query: 475 VLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQE 534
+ L+ + E G + LIF+ MLD + + RIDGG RQ + F
Sbjct: 1055 LQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNA 1114
Query: 535 KDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYL 593
+ +LS +AGG+G+ L A TVI + W P + IQA RAHRIGQ V +Y
Sbjct: 1115 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1174
Query: 594 LANDTVDDIVWDVVRSKL 611
+ +V++ + V + K+
Sbjct: 1175 VTRASVEERITQVAKKKM 1192
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 143/528 (27%), Positives = 222/528 (42%), Gaps = 76/528 (14%)
Query: 138 EIENLHPLVQRAIASASAAPDLREKYDQIPAHIE---SKLLPFQRDGV---RFALQHGGR 191
E + L P D+R+KY+ P ++ KL P+Q +G+ R +G
Sbjct: 563 EAKGLPPKEDEKKKKKREKIDIRKKYEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTD 622
Query: 192 ILLADEMGLGKTIQAIAVATCFRD----VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIV 247
+LADEMGLGKT+Q++ P LI P S ++W +QW P +V
Sbjct: 623 AILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINWEREAEQW--CPDFYVV 680
Query: 248 ---------VVLSQ-----LGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVLKLQNIL 293
VVL + + G+ RSG T N+ L + SY+ + + IL
Sbjct: 681 TYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVL--LTSYETINMDKTIL 738
Query: 294 MSSNFKIVIADESHFLKNAQAK--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEA 351
S + ++ DE+H LKN Q+ + I Y +LL+GTP + ELF L
Sbjct: 739 SSIEWGALVVDEAHRLKNNQSLFFKNLNEYTI----HYRVLLTGTPLQNNLEELFHLLNF 794
Query: 352 LYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRR 411
L + + + + F E+LHNL+ M+RRLK DVL +P K
Sbjct: 795 LSKERFNQLEAFT------AEFNEISKEDQIEKLHNLL-GPHMLRRLKADVLTGMPSKSE 847
Query: 412 QQVFLDVAEKDMRQIYAL----FRELEVVKG-----------KIKAC--------KSEEE 448
V ++++ + + F L V G ++K C K+E E
Sbjct: 848 LIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKAELE 907
Query: 449 VQSLKFTEKNLINKIYTDSA----EAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQ 504
K N +Y +A K + L + + G + LIF+ MLD +
Sbjct: 908 APKEK-------NGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMED 960
Query: 505 LFLKKKVHCIRIDGGTPPASRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFA 563
L + RIDG RQ + + + +LS +AGG+G+ L A TVI
Sbjct: 961 LCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIY 1020
Query: 564 ELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+ W P + IQA RAHR+GQ V +Y + +V++ + V + K+
Sbjct: 1021 DSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKM 1068
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 139/509 (27%), Positives = 218/509 (42%), Gaps = 68/509 (13%)
Query: 153 ASAAPDLREKYDQIPAHIESK---LLPFQRDGV---RFALQHGGRILLADEMGLGKTIQA 206
+S D KY+ P I + L +Q +G+ RF+ G +LADEMGLGKTIQ
Sbjct: 712 SSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQT 771
Query: 207 IA-VATCFRD---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFT 262
I + + +++ P L+ P S ++W Q W P VV + ++
Sbjct: 772 IVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA---PKFYVVTYT----GDKDSRA 824
Query: 263 IVSSN-----------------TKRNIPLDGLFNIISYDVVLKLQNILMSSNFKIVIADE 305
I+ N KR + + SY+++ Q L S + ++ DE
Sbjct: 825 IIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDE 884
Query: 306 SHFLKNAQAK--RTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEY 363
+H LKN Q+K R K + LLL+GTP + ELF L L P+ + N+ +
Sbjct: 885 AHRLKNNQSKFFRVLNGY----KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGF 940
Query: 364 GNRYCKGGVFGIYQGASNHEELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDM 423
F ++LH+L+ M+RRLK DV +P K V ++++
Sbjct: 941 LEE------FADISKEDQIKKLHDLL-GPHMLRRLKADVFKNMPAKTELIVRVELSPMQK 993
Query: 424 RQI-YALFRELEVVKGK--------------IKACKSEEEVQSLKFTEK-NLINKIYTDS 467
+ Y L R E + + +K C + + + E L + Y
Sbjct: 994 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1053
Query: 468 AEAKIPAVLDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPA 523
A K L L+ ++ E G + LIF+ MLD + + RIDGG A
Sbjct: 1054 ALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1113
Query: 524 SRQALVTEFQEKDDVKAA-VLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRI 582
RQ + F + +LS +AGG+G+ L A TVI + W P + IQA RAHRI
Sbjct: 1114 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRI 1173
Query: 583 GQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
GQ + V +Y + +V++ + V + K+
Sbjct: 1174 GQANKVMIYRFVTRASVEERITQVAKRKM 1202
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 215/476 (45%), Gaps = 77/476 (16%)
Query: 193 LLADEMGLGKTIQAIAVATCF----RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
+LADEMGLGKTIQ+I++ T +D+ P L++ P S +W ++W PS +
Sbjct: 492 ILADEMGLGKTIQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEKW---APSLNTI 548
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADES 306
+ G N+ + + I + G F+++ +Y+ ++K +++L ++ +I DE
Sbjct: 549 IYK--GTPNQR------HSLQHQIRV-GNFDVLLTTYEYIIKDKSLLSKHDWAHMIIDEG 599
Query: 307 HFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNR 366
H +KNAQ+K + T+ + + L+L+GTP + EL+ L + P ++ + + +
Sbjct: 600 HRMKNAQSK-LSFTISHYYRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNSAKTFEDW 658
Query: 367 YCKGGVFGIYQGASNH---------EELHNLMKATVMIRRLKKDVLAQLPVKRRQQVFLD 417
+ Q LH +++ ++RRLKK+V LP K + +
Sbjct: 659 FNTPFANTGTQEKLELTEEETLLIIRRLHKVLRP-FLLRRLKKEVEKDLPDKVEKVIKCK 717
Query: 418 VA------EKDMRQIYALFRELEVVKGKIKACKSEEEVQSLKFTEKNLINKIYTDSAEAK 471
++ + M + ALF V G A K K L NKI
Sbjct: 718 LSGLQQQLYQQMLKHNALF----VGAGTEGATKG---------GIKGLNNKIMQLRKICN 764
Query: 472 IPAVLDYLETVIE----------------------------AGCKFLIFAHHQPMLDAIH 503
P V D +E V+ +G + L+F ++D +
Sbjct: 765 HPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIME 824
Query: 504 QLFLKKKVHCIRIDGGTPPASRQALVTEFQEKD-DVKAAVLSMKAGGVGLTLTAASTVIF 562
K + +R+DG T R ++ F D D +LS +AGG+GL L A TVI
Sbjct: 825 DFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVII 884
Query: 563 AELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
+ W P +QA+DRAHRIGQ + V + L+ D+V++++ + KL+ G+V+
Sbjct: 885 FDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVI 940
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 216/462 (46%), Gaps = 50/462 (10%)
Query: 193 LLADEMGLGKTIQAIAVATCFRDV----WPVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
+LADEMGLGKTIQ I++ T ++ P L++ P S +W++ +W + +
Sbjct: 789 ILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKW-----APTLR 843
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADES 306
+S G N K+ G F+++ +++ ++K + +L + +I DE
Sbjct: 844 TISFKGSPN-------ERKAKQAKIRAGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEG 896
Query: 307 HFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNR 366
H +KNAQ+K + TL A Y L+L+GTP + EL+ L + P ++ +V +
Sbjct: 897 HRMKNAQSK-LSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEW 955
Query: 367 YCK--GGVFGIYQGASNHEE-------LHNLMKATVMIRRLKKDVLAQLP------VKRR 411
+ G + + EE LH +++ ++RRLKKDV +LP VK +
Sbjct: 956 FNTPFANTGGQDKIELSEEETLLVIRRLHKVLRP-FLLRRLKKDVEKELPDKVEKVVKCK 1014
Query: 412 QQVFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK--------FTE-KNLINK 462
+ + M + LF + K + ++ LK F E ++ IN
Sbjct: 1015 MSALQQIMYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQINP 1074
Query: 463 IY-TDSAEAKIPAVLDYLETVI----EAGCKFLIFAHHQPMLDAIHQLFLKKKVHCIRID 517
T+ ++ + L+ ++ G + LIF ++D + + +R+D
Sbjct: 1075 TRETNDDIWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLD 1134
Query: 518 GGTPPASRQALVTEFQEKD-DVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLIQAE 576
G T R L+ F D + +LS +AGG+GL L A TVI + W P +QA+
Sbjct: 1135 GHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQ 1194
Query: 577 DRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKLENLGQVL 618
DRAHRIGQ + V + L+ ++V++++ + KL+ G+V+
Sbjct: 1195 DRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVI 1236
>sp|Q5FWR0|SMRCD_XENTR SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Xenopus
tropicalis GN=smarcad1 PE=2 SV=1
Length = 1003
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 229/518 (44%), Gaps = 99/518 (19%)
Query: 174 LLPFQRDGVRF-ALQHGGRI--LLADEMGLGKTIQAIAVATCFR---DVWPVLILTPSSL 227
L P+Q+ G+ + AL H ++ +LADEMGLGKT+QAIA D P L++ P+S
Sbjct: 474 LKPYQKIGLNWLALLHKHKVNMILADEMGLGKTVQAIAFLAHLYVTGDSGPHLVVVPAST 533
Query: 228 RLHWAAMIQQWLNIPPSEIVVVLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNIISYDVVL 287
+W QW P I++ S ++++ D L ++ ++V++
Sbjct: 534 MDNWIREFNQW--CPSMNILLYYG-------------SQEERKHLRYDILNKVVEFNVIV 578
Query: 288 KLQNILMSS----------NFKIVIADESHFLKNAQAKRTAATLPIIKKAQYALLLSGTP 337
N +SS + DE H LKN A R + + A+ LLL+GTP
Sbjct: 579 TTYNCAISSAEDRSLFRRLKLNFAVFDEGHMLKNMSAIRYQHLMTL--NARSRLLLTGTP 636
Query: 338 ALSRPIELFKQLEALYPDVYKN-VHEYGNRYCKGGVFGIYQGASNHEEL---HNLMKATV 393
+ +EL L + P ++ + E + Q E + +MK +
Sbjct: 637 VQNNLLELMSLLNFVMPHMFSSSTSEIKRLFSSKAKSTDEQTIFEKERIAHAKQIMKPFI 696
Query: 394 MIRRLKKDVLAQLP-----------VKRRQQVF----------LDVAEKD---------- 422
+ RR+K +VL QLP K+++Q++ +D EK+
Sbjct: 697 L-RRVKSEVLKQLPPKQDKIKFCQMSKKQEQLYSDLLNKLKKSIDATEKNSELCNVMMHL 755
Query: 423 ---------MRQIYALFRELEVVKGKIKA---CKSE-----EEVQSLKFTEKNLINKIYT 465
RQ Y R + K +K C + E+++ + E + + +T
Sbjct: 756 RKMANHPLLHRQYYTADRLRTMSKLMLKEPTHCDANPDLIFEDMEVMTDFELHRLCNEFT 815
Query: 466 DSAEAKIPA--VLD---------YLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKVH-C 513
++ K+ +LD L + + G + ++F+ MLD I ++FL+ H
Sbjct: 816 TLSQYKLEKELILDSGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDII-EVFLRHHQHRY 874
Query: 514 IRIDGGTPPASRQALVTEFQEKDDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPGDLI 573
+R+DG T + R L+ EF D+ +LS KAGG+G+ LT+A+ VI ++ P +
Sbjct: 875 VRLDGKTQISERIHLIDEFNTDMDIFIFLLSTKAGGLGINLTSANIVILHDIDCNPYNDK 934
Query: 574 QAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
QAEDR HR+GQ V V L+ T+++ + + + KL
Sbjct: 935 QAEDRCHRVGQTKEVKVIKLIGKGTIEESMLKISQQKL 972
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 203/461 (44%), Gaps = 56/461 (12%)
Query: 193 LLADEMGLGKTIQAIAVATCF----RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
+LADEMGLGKTIQ IA+ T R P LI+ P S +WA +W PS + V
Sbjct: 776 ILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWA---PSVVKV 832
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADES 306
+ R+ + S G FN++ +Y+ ++K ++IL +K +I DE
Sbjct: 833 SYKGSPAARRAFVPQLRS---------GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEG 883
Query: 307 HFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNR 366
H +KN K T L A LLL+GTP ++ EL+ L L P ++K+ +
Sbjct: 884 HRMKNHHCKLT-QVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQW 942
Query: 367 YCKGGVFGIYQGASNHEE-------LHNLMKATVMIRRLKKDVLAQLPVK---------- 409
+ + N EE LH +++ ++RRLKK+V AQLP K
Sbjct: 943 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRP-FLLRRLKKEVEAQLPEKVEYVIKCDMS 1001
Query: 410 -------RRQQ----VFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK--FTE 456
R Q + D +EKD + + + K C Q ++ F+E
Sbjct: 1002 ALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE 1061
Query: 457 K-----NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKV 511
++ + A K + L + K L+F ++ + F +
Sbjct: 1062 HLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGF 1121
Query: 512 HCIRIDGGTPPASRQALVTEFQEK-DDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPG 570
+R+DG T R L+ F E + +LS +AGG+GL L +A TVI + W P
Sbjct: 1122 KYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPH 1181
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+QA+DRAHRIGQ + V V L ++V++ + + KL
Sbjct: 1182 QDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1222
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 203/461 (44%), Gaps = 56/461 (12%)
Query: 193 LLADEMGLGKTIQAIAVATCF----RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
+LADEMGLGKTIQ IA+ T R P LI+ P S +WA +W PS + V
Sbjct: 776 ILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWA---PSVVKV 832
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADES 306
+ R+ + S G FN++ +Y+ ++K ++IL +K +I DE
Sbjct: 833 SYKGSPAARRAFVPQLRS---------GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEG 883
Query: 307 HFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNR 366
H +KN K T L A LLL+GTP ++ EL+ L L P ++K+ +
Sbjct: 884 HRMKNHHCKLT-QVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQW 942
Query: 367 YCKGGVFGIYQGASNHEE-------LHNLMKATVMIRRLKKDVLAQLPVK---------- 409
+ + N EE LH +++ ++RRLKK+V AQLP K
Sbjct: 943 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRP-FLLRRLKKEVEAQLPEKVEYVIKCDMS 1001
Query: 410 -------RRQQ----VFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK--FTE 456
R Q + D +EKD + + + K C Q ++ F+E
Sbjct: 1002 ALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE 1061
Query: 457 K-----NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKV 511
++ + A K + L + K L+F ++ + F +
Sbjct: 1062 HLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGF 1121
Query: 512 HCIRIDGGTPPASRQALVTEFQEK-DDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPG 570
+R+DG T R L+ F E + +LS +AGG+GL L +A TVI + W P
Sbjct: 1122 KYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPH 1181
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+QA+DRAHRIGQ + V V L ++V++ + + KL
Sbjct: 1182 QDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1222
>sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1
PE=1 SV=2
Length = 1710
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 223/486 (45%), Gaps = 54/486 (11%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQH----GGRILLADEMGLGKTIQAIA-VATCF 213
L+++ I H +L +Q +G+ + L H G +LADEMGLGKTIQ I+ + F
Sbjct: 466 LKKQPSYIGGHEGLELRDYQLNGLNW-LAHSWCKGNSCILADEMGLGKTIQTISFLNYLF 524
Query: 214 RD---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNR-SGFTIVSSNTK 269
+ P L++ P S W IQ W + VV L + N TK
Sbjct: 525 HEHQLYGPFLLVVPLSTLTSWQREIQTWAS--QMNAVVYLGDINSRNMIRTHEWTHHQTK 582
Query: 270 RNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKA 327
R FNI+ +Y+++LK + L N+ + DE+H LKN + + K+
Sbjct: 583 R-----LKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDF--KS 635
Query: 328 QYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHN 387
+ LL++GTP + EL+ L + P+ + + ++ + KG +G AS H+EL
Sbjct: 636 NHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYGY---ASLHKEL-- 690
Query: 388 LMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKS 445
++RR+KKDV LP K Q + ++++ +Q Y L R + + K S
Sbjct: 691 ---EPFLLRRVKKDVEKSLPAKVEQILRMEMSAL-QKQYYKWILTRNYKALSKGSKGSTS 746
Query: 446 EEEVQSLKFTEKNLINKIY----TDSAE--AKIPAVLDYLET-------------VIEAG 486
++ K N Y D+ E K A+ + + + E G
Sbjct: 747 --GFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERG 804
Query: 487 CKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQ-EKDDVKAAVLSM 545
+ LIF+ MLD + + ++ R+DG R+ + F E + +LS
Sbjct: 805 NRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLST 864
Query: 546 KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWD 605
+AGG+G+ L +A TV+ + W P + +QA+ RAHRIGQ VN+Y L+ +V++ + +
Sbjct: 865 RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILE 924
Query: 606 VVRSKL 611
+ K+
Sbjct: 925 RAKKKM 930
>sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus GN=Chd1
PE=1 SV=3
Length = 1711
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 224/486 (46%), Gaps = 54/486 (11%)
Query: 159 LREKYDQIPAHIESKLLPFQRDGVRFALQH----GGRILLADEMGLGKTIQAIA-VATCF 213
L+++ I H +L +Q +G+ + L H G +LADEMGLGKTIQ I+ + F
Sbjct: 464 LKKQPSYIGGHEGLELRDYQLNGLNW-LAHSWCKGNSCILADEMGLGKTIQTISFLNYLF 522
Query: 214 RD---VWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVVVLSQLGGSNR-SGFTIVSSNTK 269
+ P L++ P S W IQ W + VV L + N + TK
Sbjct: 523 HEHQLYGPFLLVVPLSTLTSWQREIQTWAS--QMNAVVYLGDINSRNMIRTHEWMHPQTK 580
Query: 270 RNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADESHFLKNAQAKRTAATLPIIKKA 327
R FNI+ +Y+++LK + L N+ + DE+H LKN + + K+
Sbjct: 581 R-----LKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDF--KS 633
Query: 328 QYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYCKGGVFGIYQGASNHEELHN 387
+ LL++GTP + EL+ L + P+ + + ++ + KG +G AS H+EL
Sbjct: 634 NHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYGY---ASLHKEL-- 688
Query: 388 LMKATVMIRRLKKDVLAQLPVKRRQQVFLDVAEKDMRQIYA--LFRELEVVKGKIKACKS 445
++RR+KKDV LP K Q + ++++ +Q Y L R + + K S
Sbjct: 689 ---EPFLLRRVKKDVEKSLPAKVEQILRMEMSAL-QKQYYKWILTRNYKALSKGSKGSTS 744
Query: 446 EEEVQSLKFTEKNLINKIY----TDSAE--AKIPAVLDYLET-------------VIEAG 486
++ K N Y D+ E K A+ + + + E G
Sbjct: 745 --GFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERG 802
Query: 487 CKFLIFAHHQPMLDAIHQLFLKKKVHCIRIDGGTPPASRQALVTEFQ-EKDDVKAAVLSM 545
+ LIF+ MLD + + ++ R+DG R+ + F E + +LS
Sbjct: 803 NRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLST 862
Query: 546 KAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWD 605
+AGG+G+ L +A TV+ + W P + +QA+ RAHRIGQ VN+Y L+ +V++ + +
Sbjct: 863 RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILE 922
Query: 606 VVRSKL 611
+ K+
Sbjct: 923 RAKKKM 928
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 203/461 (44%), Gaps = 56/461 (12%)
Query: 193 LLADEMGLGKTIQAIAVATCF----RDVWPVLILTPSSLRLHWAAMIQQWLNIPPSEIVV 248
+LADEMGLGKTIQ IA+ T R P LI+ P S +WA +W PS + V
Sbjct: 776 ILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWA---PSVVKV 832
Query: 249 VLSQLGGSNRSGFTIVSSNTKRNIPLDGLFNII--SYDVVLKLQNILMSSNFKIVIADES 306
+ R+ + S G FN++ +Y+ ++K ++IL +K +I DE
Sbjct: 833 SYKGSPAARRAFVPQLRS---------GKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEG 883
Query: 307 HFLKNAQAKRTAATLPIIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNR 366
H +KN K T L A LLL+GTP ++ EL+ L L P ++K+ +
Sbjct: 884 HRMKNHHCKLT-QVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQW 942
Query: 367 YCKGGVFGIYQGASNHEE-------LHNLMKATVMIRRLKKDVLAQLPVK---------- 409
+ + N EE LH +++ ++RRLKK+V AQLP K
Sbjct: 943 FNAPFAMTGEKVDLNEEETILIIRRLHKVLRP-FLLRRLKKEVEAQLPEKVEYVIKCDMS 1001
Query: 410 -------RRQQ----VFLDVAEKDMRQIYALFRELEVVKGKIKACKSEEEVQSLK--FTE 456
R Q + D +EKD + + + K C Q ++ F+E
Sbjct: 1002 ALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE 1061
Query: 457 K-----NLINKIYTDSAEAKIPAVLDYLETVIEAGCKFLIFAHHQPMLDAIHQLFLKKKV 511
++ + A K + L + K L+F ++ + F +
Sbjct: 1062 HLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGF 1121
Query: 512 HCIRIDGGTPPASRQALVTEFQEK-DDVKAAVLSMKAGGVGLTLTAASTVIFAELSWTPG 570
+R+DG T R L+ F E + +LS +AGG+GL L +A TVI + W P
Sbjct: 1122 KYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPH 1181
Query: 571 DLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIVWDVVRSKL 611
+QA+DRAHRIGQ + V V L ++V++ + + KL
Sbjct: 1182 QDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL 1222
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 234,137,836
Number of Sequences: 539616
Number of extensions: 9600724
Number of successful extensions: 31094
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 29709
Number of HSP's gapped (non-prelim): 763
length of query: 666
length of database: 191,569,459
effective HSP length: 124
effective length of query: 542
effective length of database: 124,657,075
effective search space: 67564134650
effective search space used: 67564134650
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)