Query 005981
Match_columns 666
No_of_seqs 725 out of 3691
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 12:48:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005981.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005981hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 99.6 4.3E-15 1.5E-19 152.8 8.8 117 258-388 29-147 (257)
2 4gek_A TRNA (CMO5U34)-methyltr 99.6 1.9E-14 6.6E-19 148.2 13.2 101 273-377 69-179 (261)
3 1vl5_A Unknown conserved prote 99.5 5.8E-14 2E-18 142.6 14.9 113 259-377 26-141 (260)
4 2p35_A Trans-aconitate 2-methy 99.5 8.5E-14 2.9E-18 140.5 12.9 184 258-460 21-209 (259)
5 3dli_A Methyltransferase; PSI- 99.5 3.8E-14 1.3E-18 142.4 9.9 117 254-383 24-146 (240)
6 3dlc_A Putative S-adenosyl-L-m 99.5 5E-13 1.7E-17 130.6 16.7 116 255-377 29-149 (219)
7 3bus_A REBM, methyltransferase 99.5 1.8E-13 6.2E-18 139.6 13.6 120 252-377 43-167 (273)
8 1xxl_A YCGJ protein; structura 99.5 4.6E-13 1.6E-17 134.7 15.9 103 273-377 20-125 (239)
9 1nkv_A Hypothetical protein YJ 99.5 2.2E-13 7.5E-18 137.5 12.9 117 254-377 20-141 (256)
10 3gu3_A Methyltransferase; alph 99.5 2.5E-13 8.5E-18 140.4 13.6 115 257-377 8-127 (284)
11 3f4k_A Putative methyltransfer 99.5 3.9E-13 1.3E-17 135.7 14.6 118 254-377 29-151 (257)
12 3kkz_A Uncharacterized protein 99.5 4.5E-13 1.5E-17 136.7 14.6 118 254-377 29-151 (267)
13 2p7i_A Hypothetical protein; p 99.4 1.7E-13 5.8E-18 136.5 10.3 97 275-377 43-142 (250)
14 2o57_A Putative sarcosine dime 99.4 4E-13 1.4E-17 139.0 13.0 120 253-377 61-188 (297)
15 3dtn_A Putative methyltransfer 99.4 4.7E-13 1.6E-17 133.3 13.0 117 254-377 27-149 (234)
16 1xtp_A LMAJ004091AAA; SGPP, st 99.4 7.5E-14 2.6E-18 140.5 6.9 115 257-377 80-198 (254)
17 3hnr_A Probable methyltransfer 99.4 5.6E-13 1.9E-17 131.4 12.7 104 274-384 45-152 (220)
18 3sm3_A SAM-dependent methyltra 99.4 7.1E-13 2.4E-17 131.2 12.8 107 274-382 30-147 (235)
19 3mgg_A Methyltransferase; NYSG 99.4 9.4E-13 3.2E-17 134.6 13.8 102 273-376 36-142 (276)
20 2yqz_A Hypothetical protein TT 99.4 7.6E-13 2.6E-17 133.6 12.9 101 273-375 38-140 (263)
21 3g5l_A Putative S-adenosylmeth 99.4 5.9E-13 2E-17 134.4 11.6 110 260-377 34-146 (253)
22 1pjz_A Thiopurine S-methyltran 99.4 1.9E-13 6.4E-18 134.8 7.5 103 274-376 22-140 (203)
23 3ujc_A Phosphoethanolamine N-m 99.4 4E-13 1.4E-17 135.7 9.4 119 253-377 38-160 (266)
24 3l8d_A Methyltransferase; stru 99.4 5E-13 1.7E-17 133.5 10.0 110 258-377 43-154 (242)
25 3dh0_A SAM dependent methyltra 99.4 1E-12 3.6E-17 129.3 11.8 102 274-377 37-144 (219)
26 4fsd_A Arsenic methyltransfera 99.4 2.5E-13 8.6E-18 146.9 7.8 171 274-461 83-273 (383)
27 2gs9_A Hypothetical protein TT 99.4 2.3E-12 7.8E-17 126.3 13.8 98 274-378 36-134 (211)
28 3h2b_A SAM-dependent methyltra 99.4 1.2E-12 4E-17 127.7 11.1 98 275-377 42-142 (203)
29 3g5t_A Trans-aconitate 3-methy 99.4 1.7E-12 5.7E-17 134.9 13.0 111 258-375 25-148 (299)
30 4htf_A S-adenosylmethionine-de 99.4 1.2E-12 4.3E-17 134.7 11.9 102 274-377 68-174 (285)
31 3vc1_A Geranyl diphosphate 2-C 99.4 2.1E-12 7.1E-17 135.3 13.5 113 259-377 105-222 (312)
32 3ofk_A Nodulation protein S; N 99.4 8.2E-13 2.8E-17 130.0 9.7 101 273-377 50-155 (216)
33 2ex4_A Adrenal gland protein A 99.4 1.5E-12 5.1E-17 130.8 11.6 103 274-377 79-186 (241)
34 2avn_A Ubiquinone/menaquinone 99.4 1.6E-12 5.4E-17 132.4 11.7 98 274-377 54-153 (260)
35 3ege_A Putative methyltransfer 99.4 7.1E-13 2.4E-17 135.2 8.9 109 257-377 21-131 (261)
36 1ve3_A Hypothetical protein PH 99.4 2.5E-12 8.6E-17 126.9 12.6 102 275-377 39-143 (227)
37 2gb4_A Thiopurine S-methyltran 99.4 5.1E-13 1.7E-17 136.9 7.8 103 274-376 68-191 (252)
38 3mti_A RRNA methylase; SAM-dep 99.4 3.1E-12 1.1E-16 122.9 12.8 103 274-377 22-136 (185)
39 2xvm_A Tellurite resistance pr 99.4 3.2E-12 1.1E-16 123.3 12.9 100 275-376 33-136 (199)
40 3jwg_A HEN1, methyltransferase 99.4 2E-12 6.8E-17 127.7 11.5 116 255-376 14-141 (219)
41 3e23_A Uncharacterized protein 99.4 2.7E-12 9.4E-17 125.9 12.4 96 275-377 44-142 (211)
42 2p8j_A S-adenosylmethionine-de 99.4 1.9E-12 6.7E-17 126.3 11.3 103 274-377 23-129 (209)
43 2aot_A HMT, histamine N-methyl 99.4 9.4E-13 3.2E-17 136.6 9.6 103 274-377 52-173 (292)
44 3thr_A Glycine N-methyltransfe 99.4 8.7E-13 3E-17 136.0 9.2 117 256-377 43-176 (293)
45 3jwh_A HEN1; methyltransferase 99.4 1.7E-12 5.8E-17 128.1 10.8 115 256-376 15-141 (217)
46 3ccf_A Cyclopropane-fatty-acyl 99.4 4E-12 1.4E-16 130.6 13.9 109 274-390 57-167 (279)
47 3hem_A Cyclopropane-fatty-acyl 99.4 3.7E-12 1.3E-16 132.5 13.2 115 254-377 56-184 (302)
48 3orh_A Guanidinoacetate N-meth 99.4 6.8E-13 2.3E-17 134.0 7.3 113 256-375 47-169 (236)
49 1kpg_A CFA synthase;, cyclopro 99.3 3.9E-12 1.3E-16 130.9 12.5 116 254-377 48-169 (287)
50 3ou2_A SAM-dependent methyltra 99.3 2.6E-12 9E-17 125.8 10.3 110 259-378 34-148 (218)
51 1y8c_A S-adenosylmethionine-de 99.3 4.9E-12 1.7E-16 126.0 12.3 119 255-377 20-143 (246)
52 3pfg_A N-methyltransferase; N, 99.3 4.4E-12 1.5E-16 128.9 11.9 97 274-376 50-151 (263)
53 1zx0_A Guanidinoacetate N-meth 99.3 1.1E-12 3.8E-17 131.6 7.3 114 256-376 47-170 (236)
54 2kw5_A SLR1183 protein; struct 99.3 3.8E-12 1.3E-16 123.9 10.6 98 277-377 32-132 (202)
55 3bkw_A MLL3908 protein, S-aden 99.3 3.4E-12 1.2E-16 127.3 10.1 100 274-377 43-145 (243)
56 3g2m_A PCZA361.24; SAM-depende 99.3 5E-12 1.7E-16 131.3 11.8 114 257-377 70-191 (299)
57 3i9f_A Putative type 11 methyl 99.3 4.6E-12 1.6E-16 119.9 9.9 95 274-377 17-113 (170)
58 2a14_A Indolethylamine N-methy 99.3 2E-12 6.7E-17 132.5 7.5 104 274-377 55-198 (263)
59 3p9n_A Possible methyltransfer 99.3 6.1E-12 2.1E-16 121.8 10.2 124 252-377 23-154 (189)
60 3lcc_A Putative methyl chlorid 99.3 1.1E-11 3.7E-16 123.9 11.4 102 276-378 68-173 (235)
61 2vdw_A Vaccinia virus capping 99.3 4.8E-12 1.6E-16 133.0 9.2 103 274-377 48-170 (302)
62 2pxx_A Uncharacterized protein 99.3 9.1E-12 3.1E-16 121.5 10.5 102 274-377 42-160 (215)
63 2fk8_A Methoxy mycolic acid sy 99.3 1.5E-11 5E-16 128.8 12.7 115 255-377 75-195 (318)
64 3m70_A Tellurite resistance pr 99.3 1.4E-11 4.7E-16 126.9 12.0 100 275-376 121-223 (286)
65 1vlm_A SAM-dependent methyltra 99.3 2.7E-11 9.3E-16 119.9 13.6 94 275-378 48-141 (219)
66 3d2l_A SAM-dependent methyltra 99.3 2.7E-11 9.2E-16 120.8 13.5 115 255-377 20-138 (243)
67 1dus_A MJ0882; hypothetical pr 99.3 2.3E-11 8E-16 116.2 12.4 115 257-377 39-158 (194)
68 4e2x_A TCAB9; kijanose, tetron 99.3 1.4E-12 4.7E-17 142.1 4.2 113 255-377 92-209 (416)
69 3e8s_A Putative SAM dependent 99.3 9.6E-12 3.3E-16 122.1 9.7 96 274-377 52-153 (227)
70 3m33_A Uncharacterized protein 99.3 3.5E-12 1.2E-16 127.3 6.6 88 274-373 48-139 (226)
71 1wzn_A SAM-dependent methyltra 99.3 3.2E-11 1.1E-15 121.4 12.9 102 274-377 41-146 (252)
72 2g72_A Phenylethanolamine N-me 99.2 9E-12 3.1E-16 128.8 8.7 116 259-376 58-215 (289)
73 3dmg_A Probable ribosomal RNA 99.2 1.2E-11 4.2E-16 134.1 10.0 122 254-378 215-342 (381)
74 3bgv_A MRNA CAP guanine-N7 met 99.2 1.9E-11 6.5E-16 127.9 11.0 103 274-377 34-156 (313)
75 3cc8_A Putative methyltransfer 99.2 1.5E-11 5.2E-16 121.0 9.5 96 274-377 32-131 (230)
76 3bxo_A N,N-dimethyltransferase 99.2 2E-11 6.9E-16 121.4 10.3 98 274-377 40-142 (239)
77 3ocj_A Putative exported prote 99.2 2E-11 6.8E-16 127.4 10.1 101 274-377 118-228 (305)
78 3hm2_A Precorrin-6Y C5,15-meth 99.2 4.8E-11 1.7E-15 113.2 11.8 111 257-377 12-128 (178)
79 3grz_A L11 mtase, ribosomal pr 99.2 2.8E-11 9.6E-16 118.3 9.8 97 274-377 60-160 (205)
80 1ri5_A MRNA capping enzyme; me 99.2 2.6E-11 8.8E-16 124.6 9.9 103 274-377 64-175 (298)
81 3cgg_A SAM-dependent methyltra 99.2 1.1E-10 3.8E-15 111.6 13.6 99 274-377 46-148 (195)
82 3g07_A 7SK snRNA methylphospha 99.2 1.1E-11 3.7E-16 129.0 6.8 104 274-377 46-221 (292)
83 3iv6_A Putative Zn-dependent a 99.2 2.2E-11 7.4E-16 125.6 8.6 109 258-377 33-149 (261)
84 3e05_A Precorrin-6Y C5,15-meth 99.2 2.7E-10 9.1E-15 111.4 15.8 112 257-377 27-143 (204)
85 2zfu_A Nucleomethylin, cerebra 99.2 7.4E-11 2.5E-15 116.0 10.9 86 274-377 67-152 (215)
86 3pfg_A N-methyltransferase; N, 99.2 5.5E-11 1.9E-15 120.7 10.1 134 520-662 52-249 (263)
87 1xdz_A Methyltransferase GIDB; 99.2 2E-10 6.8E-15 115.7 14.2 97 274-376 70-174 (240)
88 3h2b_A SAM-dependent methyltra 99.2 8.1E-11 2.8E-15 114.5 10.8 135 520-662 43-195 (203)
89 3eey_A Putative rRNA methylase 99.2 7.7E-11 2.6E-15 114.3 10.6 103 274-377 22-140 (197)
90 3bkx_A SAM-dependent methyltra 99.2 8.1E-11 2.8E-15 120.0 11.1 115 257-377 30-160 (275)
91 1yzh_A TRNA (guanine-N(7)-)-me 99.2 1.1E-10 3.6E-15 115.4 11.6 102 274-377 41-157 (214)
92 3e8s_A Putative SAM dependent 99.2 1.7E-10 5.8E-15 113.2 12.9 134 520-662 54-227 (227)
93 3ggd_A SAM-dependent methyltra 99.2 3.1E-11 1E-15 121.2 7.7 100 274-377 56-164 (245)
94 3dxy_A TRNA (guanine-N(7)-)-me 99.2 3.5E-11 1.2E-15 120.4 7.9 102 274-377 34-151 (218)
95 2i62_A Nicotinamide N-methyltr 99.2 3.5E-11 1.2E-15 121.5 7.7 103 274-377 56-199 (265)
96 2fca_A TRNA (guanine-N(7)-)-me 99.2 6.3E-11 2.1E-15 117.7 9.2 102 274-377 38-154 (213)
97 3njr_A Precorrin-6Y methylase; 99.2 2.6E-10 8.9E-15 112.5 13.5 97 274-377 55-155 (204)
98 1p91_A Ribosomal RNA large sub 99.1 1.2E-10 4E-15 118.7 11.0 91 274-377 85-179 (269)
99 3evz_A Methyltransferase; NYSG 99.1 9.5E-11 3.2E-15 116.4 9.9 103 274-377 55-180 (230)
100 2fhp_A Methylase, putative; al 99.1 9.9E-11 3.4E-15 111.9 9.6 122 250-377 23-155 (187)
101 3q7e_A Protein arginine N-meth 99.1 1.6E-10 5.5E-15 123.6 12.2 100 274-375 66-172 (349)
102 2ift_A Putative methylase HI07 99.1 5.1E-11 1.7E-15 117.2 7.7 119 254-378 36-165 (201)
103 3lbf_A Protein-L-isoaspartate 99.1 1.7E-10 5.9E-15 113.0 11.4 109 257-377 64-175 (210)
104 3htx_A HEN1; HEN1, small RNA m 99.1 2.8E-10 9.7E-15 132.1 14.5 117 255-377 706-835 (950)
105 2xvm_A Tellurite resistance pr 99.1 1.5E-10 5.1E-15 111.6 10.1 118 520-646 34-172 (199)
106 1nt2_A Fibrillarin-like PRE-rR 99.1 2.4E-10 8.2E-15 113.5 11.8 98 273-376 56-161 (210)
107 2fyt_A Protein arginine N-meth 99.1 3.1E-10 1.1E-14 121.0 12.9 111 257-373 51-168 (340)
108 3fpf_A Mtnas, putative unchara 99.1 2.7E-10 9.2E-15 119.3 12.0 97 273-376 121-222 (298)
109 2fpo_A Methylase YHHF; structu 99.1 1.6E-10 5.5E-15 113.7 9.4 119 253-377 36-161 (202)
110 3jwg_A HEN1, methyltransferase 99.1 5.4E-10 1.8E-14 110.1 13.2 139 520-662 31-210 (219)
111 3ckk_A TRNA (guanine-N(7)-)-me 99.1 1.7E-10 5.9E-15 116.7 9.7 103 274-377 46-169 (235)
112 3r0q_C Probable protein argini 99.1 3.8E-10 1.3E-14 122.0 12.9 113 257-376 50-169 (376)
113 1ws6_A Methyltransferase; stru 99.1 1.1E-10 3.7E-15 109.8 7.6 120 252-377 21-148 (171)
114 2qe6_A Uncharacterized protein 99.1 3.1E-10 1.1E-14 117.4 11.7 116 257-377 63-197 (274)
115 1ej0_A FTSJ; methyltransferase 99.1 3.3E-10 1.1E-14 106.1 10.2 93 273-377 21-137 (180)
116 4hg2_A Methyltransferase type 99.1 4.3E-11 1.5E-15 122.9 4.4 92 521-621 42-134 (257)
117 2nxc_A L11 mtase, ribosomal pr 99.1 2.2E-10 7.5E-15 117.0 9.7 98 274-377 120-219 (254)
118 2yxd_A Probable cobalt-precorr 99.1 5.5E-10 1.9E-14 105.8 11.7 109 256-377 21-132 (183)
119 3g89_A Ribosomal RNA small sub 99.1 3.5E-10 1.2E-14 115.4 11.0 97 274-376 80-184 (249)
120 3hnr_A Probable methyltransfer 99.1 2.3E-10 7.8E-15 112.6 9.3 132 520-662 47-212 (220)
121 3fzg_A 16S rRNA methylase; met 99.1 1.1E-10 3.8E-15 114.6 6.7 99 274-375 49-151 (200)
122 2esr_A Methyltransferase; stru 99.1 9.2E-11 3.1E-15 111.8 5.9 118 254-377 14-139 (177)
123 3dlc_A Putative S-adenosyl-L-m 99.1 4E-10 1.4E-14 109.8 10.6 130 521-662 46-214 (219)
124 1l3i_A Precorrin-6Y methyltran 99.1 1.1E-09 3.8E-14 104.3 13.4 111 257-377 20-135 (192)
125 3p2e_A 16S rRNA methylase; met 99.1 1E-10 3.4E-15 117.6 6.3 102 274-376 24-139 (225)
126 4df3_A Fibrillarin-like rRNA/T 99.1 1.6E-10 5.5E-15 117.2 7.7 113 258-376 62-182 (233)
127 3v97_A Ribosomal RNA large sub 99.1 4.7E-10 1.6E-14 130.6 12.6 120 521-644 542-679 (703)
128 1y8c_A S-adenosylmethionine-de 99.1 7.2E-10 2.5E-14 110.2 12.2 156 498-662 20-245 (246)
129 2pjd_A Ribosomal RNA small sub 99.1 7.1E-11 2.4E-15 125.8 5.1 112 259-377 185-304 (343)
130 3mq2_A 16S rRNA methyltransfer 99.1 2.3E-10 7.9E-15 112.8 8.1 101 274-376 27-140 (218)
131 3bxo_A N,N-dimethyltransferase 99.1 4E-10 1.4E-14 111.9 9.8 155 499-662 21-239 (239)
132 4dcm_A Ribosomal RNA large sub 99.0 1.6E-10 5.5E-15 125.0 7.3 113 259-377 211-335 (375)
133 3uwp_A Histone-lysine N-methyl 99.0 1.8E-10 6E-15 125.4 7.5 120 251-376 154-288 (438)
134 1pjz_A Thiopurine S-methyltran 99.0 2.7E-10 9.3E-15 112.1 8.3 131 507-646 13-175 (203)
135 1jsx_A Glucose-inhibited divis 99.0 6.1E-10 2.1E-14 108.6 10.7 95 275-376 66-165 (207)
136 3hp7_A Hemolysin, putative; st 99.0 7.8E-10 2.7E-14 115.7 11.9 97 274-379 85-188 (291)
137 2frn_A Hypothetical protein PH 99.0 6.2E-10 2.1E-14 115.2 11.1 115 250-377 107-226 (278)
138 3ujc_A Phosphoethanolamine N-m 99.0 5.1E-10 1.7E-14 112.8 10.1 118 520-643 57-202 (266)
139 2y1w_A Histone-arginine methyl 99.0 8.3E-10 2.8E-14 117.9 12.1 112 257-375 37-154 (348)
140 1vbf_A 231AA long hypothetical 99.0 5.4E-10 1.8E-14 111.1 10.0 108 257-377 57-166 (231)
141 3i53_A O-methyltransferase; CO 99.0 6.7E-10 2.3E-14 117.2 11.3 99 274-377 169-275 (332)
142 3dmg_A Probable ribosomal RNA 99.0 9.6E-10 3.3E-14 119.2 12.4 111 520-635 235-355 (381)
143 3dh0_A SAM dependent methyltra 99.0 4.4E-10 1.5E-14 110.5 8.8 141 509-662 30-193 (219)
144 2p7i_A Hypothetical protein; p 99.0 3.6E-10 1.2E-14 112.3 8.3 115 521-644 45-196 (250)
145 3q87_B N6 adenine specific DNA 99.0 9.3E-10 3.2E-14 105.2 10.9 91 275-377 24-124 (170)
146 1g6q_1 HnRNP arginine N-methyl 99.0 1E-09 3.6E-14 116.2 12.2 112 257-374 25-143 (328)
147 3lpm_A Putative methyltransfer 99.0 9.5E-10 3.3E-14 112.0 11.4 103 274-377 49-177 (259)
148 4dzr_A Protein-(glutamine-N5) 99.0 9.1E-11 3.1E-15 114.1 3.6 118 255-377 14-165 (215)
149 1x19_A CRTF-related protein; m 99.0 1.4E-09 4.7E-14 116.1 13.0 111 259-377 179-296 (359)
150 3gdh_A Trimethylguanosine synt 99.0 2.2E-11 7.7E-16 122.0 -0.9 99 274-375 78-180 (241)
151 4dcm_A Ribosomal RNA large sub 99.0 3.1E-08 1.1E-12 107.0 23.5 127 520-661 224-367 (375)
152 3dp7_A SAM-dependent methyltra 99.0 6.6E-10 2.3E-14 119.1 10.0 101 274-377 179-288 (363)
153 1dl5_A Protein-L-isoaspartate 99.0 1.1E-09 3.9E-14 115.2 11.4 109 257-377 62-176 (317)
154 3i9f_A Putative type 11 methyl 99.0 6.2E-10 2.1E-14 105.1 8.3 126 520-662 19-160 (170)
155 1nkv_A Hypothetical protein YJ 99.0 8.2E-10 2.8E-14 111.1 9.7 124 508-642 28-182 (256)
156 2r3s_A Uncharacterized protein 99.0 1.3E-09 4.5E-14 114.4 11.6 101 274-377 165-272 (335)
157 3sm3_A SAM-dependent methyltra 99.0 1.1E-09 3.9E-14 108.0 10.3 120 520-644 32-204 (235)
158 3ou2_A SAM-dependent methyltra 99.0 8.9E-10 3E-14 107.7 9.2 120 521-647 49-205 (218)
159 3e23_A Uncharacterized protein 99.0 4.9E-10 1.7E-14 109.8 7.4 117 520-644 45-179 (211)
160 1qzz_A RDMB, aclacinomycin-10- 99.0 1.3E-09 4.6E-14 116.4 11.3 99 274-377 182-288 (374)
161 1af7_A Chemotaxis receptor met 99.0 5.5E-10 1.9E-14 115.9 7.8 100 275-375 106-251 (274)
162 3lcc_A Putative methyl chlorid 99.0 2.9E-09 9.8E-14 106.2 12.8 119 520-645 68-205 (235)
163 3ofk_A Nodulation protein S; N 99.0 3.4E-09 1.2E-13 103.9 13.2 101 516-622 49-154 (216)
164 2yxe_A Protein-L-isoaspartate 99.0 2.3E-09 8E-14 105.2 11.8 108 257-377 64-178 (215)
165 2pwy_A TRNA (adenine-N(1)-)-me 99.0 2.4E-09 8.1E-14 107.9 12.1 108 260-377 86-199 (258)
166 3gwz_A MMCR; methyltransferase 99.0 1.5E-09 5E-14 116.7 11.1 100 273-377 201-308 (369)
167 3l8d_A Methyltransferase; stru 99.0 1.1E-09 3.8E-14 109.1 9.5 116 521-644 56-197 (242)
168 3dli_A Methyltransferase; PSI- 99.0 3.3E-10 1.1E-14 113.5 5.5 117 520-644 43-181 (240)
169 1fbn_A MJ fibrillarin homologu 99.0 1.1E-09 3.7E-14 109.6 9.2 93 274-375 74-177 (230)
170 2b3t_A Protein methyltransfera 99.0 4.8E-09 1.6E-13 107.9 14.3 116 254-376 94-238 (276)
171 2ip2_A Probable phenazine-spec 99.0 2.3E-09 8E-14 112.9 12.3 98 276-377 169-273 (334)
172 4htf_A S-adenosylmethionine-de 99.0 8.7E-10 3E-14 113.3 8.6 117 520-644 70-229 (285)
173 1kpg_A CFA synthase;, cyclopro 99.0 1.6E-09 5.4E-14 111.3 10.5 103 509-622 57-168 (287)
174 2ipx_A RRNA 2'-O-methyltransfe 99.0 1E-09 3.5E-14 109.7 8.8 98 274-377 77-183 (233)
175 3jwh_A HEN1; methyltransferase 99.0 2.4E-09 8.3E-14 105.4 11.3 138 501-644 14-189 (217)
176 1yb2_A Hypothetical protein TA 99.0 1.2E-09 4.2E-14 112.3 9.5 97 273-377 109-212 (275)
177 3mti_A RRNA methylase; SAM-dep 99.0 1.3E-09 4.3E-14 104.6 8.9 136 521-661 25-183 (185)
178 3mcz_A O-methyltransferase; ad 99.0 1.4E-09 4.8E-14 115.4 10.1 100 275-377 180-288 (352)
179 1o9g_A RRNA methyltransferase; 99.0 8.6E-10 2.9E-14 111.6 8.0 117 257-377 38-215 (250)
180 2vdv_E TRNA (guanine-N(7)-)-me 99.0 1.5E-09 5.3E-14 109.7 9.8 103 274-377 49-174 (246)
181 1xtp_A LMAJ004091AAA; SGPP, st 99.0 5.6E-10 1.9E-14 112.1 6.4 123 519-646 94-237 (254)
182 1i9g_A Hypothetical protein RV 99.0 2.8E-09 9.6E-14 109.1 11.8 109 259-377 88-204 (280)
183 3cgg_A SAM-dependent methyltra 98.9 3.1E-09 1.1E-13 101.4 11.2 137 520-662 48-195 (195)
184 3mb5_A SAM-dependent methyltra 98.9 4.9E-09 1.7E-13 105.8 13.2 107 259-377 82-195 (255)
185 2zfu_A Nucleomethylin, cerebra 98.9 1.4E-08 4.9E-13 99.6 15.7 120 520-662 69-191 (215)
186 3dr5_A Putative O-methyltransf 98.9 1.8E-09 6.1E-14 108.1 9.3 113 255-376 41-163 (221)
187 2plw_A Ribosomal RNA methyltra 98.9 5E-09 1.7E-13 101.6 12.1 92 274-377 22-155 (201)
188 3opn_A Putative hemolysin; str 98.9 3.1E-10 1.1E-14 114.8 3.6 92 274-376 37-137 (232)
189 3u81_A Catechol O-methyltransf 98.9 1.2E-09 4E-14 108.5 7.7 100 275-377 59-171 (221)
190 3adn_A Spermidine synthase; am 98.9 7.1E-09 2.4E-13 108.5 14.0 102 274-376 83-198 (294)
191 1vl5_A Unknown conserved prote 98.9 1.4E-09 4.9E-14 110.0 8.5 103 509-622 30-140 (260)
192 1vlm_A SAM-dependent methyltra 98.9 6.7E-09 2.3E-13 102.6 13.0 112 520-644 49-185 (219)
193 4e2x_A TCAB9; kijanose, tetron 98.9 8.6E-10 3E-14 119.9 7.1 142 493-645 80-251 (416)
194 1i1n_A Protein-L-isoaspartate 98.9 5.2E-09 1.8E-13 103.6 12.0 96 274-377 77-183 (226)
195 4azs_A Methyltransferase WBDD; 98.9 6.5E-10 2.2E-14 126.5 6.1 102 274-377 66-174 (569)
196 1tw3_A COMT, carminomycin 4-O- 98.9 3.8E-09 1.3E-13 112.4 11.4 99 274-377 183-289 (360)
197 3bus_A REBM, methyltransferase 98.9 2.1E-09 7.3E-14 109.3 9.0 104 508-622 53-166 (273)
198 1xj5_A Spermidine synthase 1; 98.9 9.8E-09 3.3E-13 109.4 14.5 116 274-390 120-249 (334)
199 3ccf_A Cyclopropane-fatty-acyl 98.9 2E-09 6.8E-14 110.4 8.8 94 520-622 59-154 (279)
200 3m70_A Tellurite resistance pr 98.9 2E-09 6.9E-14 110.6 8.8 117 520-645 122-258 (286)
201 3bzb_A Uncharacterized protein 98.9 5.4E-09 1.9E-13 108.2 12.1 118 254-376 63-205 (281)
202 1jg1_A PIMT;, protein-L-isoasp 98.9 3.7E-09 1.3E-13 105.9 10.4 108 257-377 78-190 (235)
203 2o57_A Putative sarcosine dime 98.9 1.9E-09 6.6E-14 111.3 8.5 116 520-643 84-230 (297)
204 1u2z_A Histone-lysine N-methyl 98.9 2.5E-09 8.7E-14 117.6 9.9 115 256-376 228-359 (433)
205 3sso_A Methyltransferase; macr 98.9 1.1E-09 3.8E-14 118.8 6.9 104 257-376 204-324 (419)
206 3ntv_A MW1564 protein; rossman 98.9 3.8E-09 1.3E-13 105.9 10.3 97 275-376 72-176 (232)
207 1r18_A Protein-L-isoaspartate( 98.9 5.6E-09 1.9E-13 103.9 11.2 110 258-377 70-195 (227)
208 3g5l_A Putative S-adenosylmeth 98.9 2.9E-09 9.8E-14 107.2 9.1 119 520-645 46-214 (253)
209 3ege_A Putative methyltransfer 98.9 1.3E-09 4.6E-14 110.8 6.6 94 520-622 36-130 (261)
210 1jsx_A Glucose-inhibited divis 98.9 5.3E-09 1.8E-13 101.9 10.6 127 521-662 68-205 (207)
211 2ozv_A Hypothetical protein AT 98.9 2.2E-09 7.5E-14 109.9 8.2 104 274-377 36-171 (260)
212 3g2m_A PCZA361.24; SAM-depende 98.9 3.6E-09 1.2E-13 109.7 9.9 94 521-621 85-189 (299)
213 4gek_A TRNA (CMO5U34)-methyltr 98.9 1E-09 3.5E-14 112.8 5.7 94 521-623 73-179 (261)
214 1xdz_A Methyltransferase GIDB; 98.9 7.7E-09 2.6E-13 104.0 12.0 132 520-663 72-220 (240)
215 2p35_A Trans-aconitate 2-methy 98.9 2.8E-09 9.7E-14 107.2 8.7 94 520-622 35-132 (259)
216 3kkz_A Uncharacterized protein 98.9 3.7E-09 1.3E-13 107.6 9.6 117 520-644 48-193 (267)
217 3bwc_A Spermidine synthase; SA 98.9 8.7E-09 3E-13 108.1 12.7 103 274-377 95-211 (304)
218 3ocj_A Putative exported prote 98.9 2.8E-09 9.4E-14 111.1 8.7 135 520-662 120-304 (305)
219 3eey_A Putative rRNA methylase 98.9 7.2E-09 2.5E-13 100.3 11.0 139 521-663 25-189 (197)
220 1xxl_A YCGJ protein; structura 98.9 2.3E-09 7.7E-14 107.6 7.6 105 508-622 13-124 (239)
221 3tfw_A Putative O-methyltransf 98.9 5.3E-09 1.8E-13 106.1 10.3 98 275-377 64-171 (248)
222 3hem_A Cyclopropane-fatty-acyl 98.9 2.8E-09 9.6E-14 110.7 8.4 106 507-622 63-183 (302)
223 2pbf_A Protein-L-isoaspartate 98.9 5.1E-09 1.7E-13 103.8 9.8 96 274-377 80-194 (227)
224 2ld4_A Anamorsin; methyltransf 98.9 7.2E-10 2.5E-14 105.7 3.5 88 273-376 11-101 (176)
225 3id6_C Fibrillarin-like rRNA/T 98.9 9.7E-09 3.3E-13 104.0 11.9 113 257-376 60-181 (232)
226 3dtn_A Putative methyltransfer 98.9 1.2E-08 4.1E-13 101.3 12.4 135 520-664 46-228 (234)
227 1fp1_D Isoliquiritigenin 2'-O- 98.9 2.7E-09 9.4E-14 114.5 8.3 104 259-376 197-306 (372)
228 1g8a_A Fibrillarin-like PRE-rR 98.9 8.3E-09 2.8E-13 102.4 11.1 113 257-376 57-178 (227)
229 3evz_A Methyltransferase; NYSG 98.9 1.3E-08 4.5E-13 100.9 12.4 137 520-662 57-220 (230)
230 3f4k_A Putative methyltransfer 98.9 4.4E-09 1.5E-13 105.8 9.0 116 521-644 49-193 (257)
231 3b3j_A Histone-arginine methyl 98.9 4.7E-09 1.6E-13 117.1 10.0 112 257-375 145-262 (480)
232 3d2l_A SAM-dependent methyltra 98.8 1.5E-08 5.3E-13 100.6 12.5 94 520-620 35-135 (243)
233 3hp7_A Hemolysin, putative; st 98.8 1.1E-08 3.9E-13 106.8 11.9 132 520-661 87-249 (291)
234 2fk8_A Methoxy mycolic acid sy 98.8 3.6E-09 1.2E-13 110.5 8.2 103 509-622 83-194 (318)
235 3c3p_A Methyltransferase; NP_9 98.8 8.6E-09 2.9E-13 101.2 10.3 96 275-376 57-160 (210)
236 2oxt_A Nucleoside-2'-O-methylt 98.8 1E-08 3.5E-13 105.7 11.2 99 274-377 74-186 (265)
237 3a27_A TYW2, uncharacterized p 98.8 8.9E-09 3.1E-13 106.2 10.6 97 274-377 119-220 (272)
238 2yqz_A Hypothetical protein TT 98.8 4.4E-09 1.5E-13 105.9 8.1 94 520-621 41-140 (263)
239 3tma_A Methyltransferase; thum 98.8 1.1E-08 3.6E-13 109.3 11.2 115 258-377 191-318 (354)
240 3giw_A Protein of unknown func 98.8 4.5E-09 1.5E-13 108.9 8.0 117 257-377 64-201 (277)
241 3hm2_A Precorrin-6Y C5,15-meth 98.8 8.6E-09 3E-13 97.5 9.4 118 511-643 20-149 (178)
242 2wa2_A Non-structural protein 98.8 6.2E-09 2.1E-13 108.1 9.0 94 274-377 82-194 (276)
243 2ex4_A Adrenal gland protein A 98.8 3.2E-09 1.1E-13 106.3 6.6 123 519-646 80-224 (241)
244 3e05_A Precorrin-6Y C5,15-meth 98.8 1.3E-08 4.5E-13 99.3 10.7 120 510-643 34-164 (204)
245 3lst_A CALO1 methyltransferase 98.8 2.8E-09 9.5E-14 113.5 6.4 96 274-377 184-287 (348)
246 2nyu_A Putative ribosomal RNA 98.8 1.3E-08 4.5E-13 98.1 10.6 93 274-377 22-146 (196)
247 1dus_A MJ0882; hypothetical pr 98.8 6.7E-09 2.3E-13 99.0 8.4 138 509-661 45-193 (194)
248 1inl_A Spermidine synthase; be 98.8 2.3E-08 8E-13 104.5 13.2 103 274-377 90-206 (296)
249 2yvl_A TRMI protein, hypotheti 98.8 1.8E-08 6.1E-13 100.8 11.9 97 274-377 91-191 (248)
250 2a14_A Indolethylamine N-methy 98.8 3.4E-09 1.2E-13 108.3 6.7 139 520-662 57-260 (263)
251 3cc8_A Putative methyltransfer 98.8 1E-08 3.6E-13 100.5 9.9 117 519-644 33-182 (230)
252 3gu3_A Methyltransferase; alph 98.8 4.1E-09 1.4E-13 108.7 7.1 97 519-624 23-128 (284)
253 3reo_A (ISO)eugenol O-methyltr 98.8 5.3E-09 1.8E-13 112.4 8.3 94 274-377 203-301 (368)
254 3tr6_A O-methyltransferase; ce 98.8 6.4E-09 2.2E-13 102.8 8.2 97 275-376 65-174 (225)
255 4hc4_A Protein arginine N-meth 98.8 1.5E-08 5.2E-13 109.6 11.8 112 257-375 70-188 (376)
256 2gb4_A Thiopurine S-methyltran 98.8 3E-09 1E-13 108.8 5.8 119 520-645 70-225 (252)
257 3mgg_A Methyltransferase; NYSG 98.8 3.4E-09 1.2E-13 108.1 6.2 95 520-622 39-142 (276)
258 3thr_A Glycine N-methyltransfe 98.8 2E-09 6.8E-14 110.8 4.5 99 520-623 59-176 (293)
259 2igt_A SAM dependent methyltra 98.8 1.3E-08 4.5E-13 108.2 10.9 103 274-377 153-273 (332)
260 2pxx_A Uncharacterized protein 98.8 4.8E-09 1.6E-13 102.0 6.8 134 520-661 44-197 (215)
261 1iy9_A Spermidine synthase; ro 98.8 1.9E-08 6.5E-13 104.1 11.6 103 274-377 75-190 (275)
262 3p9c_A Caffeic acid O-methyltr 98.8 7.2E-09 2.5E-13 111.3 8.4 94 274-377 201-299 (364)
263 3vc1_A Geranyl diphosphate 2-C 98.8 1E-08 3.5E-13 107.2 9.3 115 520-644 119-266 (312)
264 3duw_A OMT, O-methyltransferas 98.8 1E-08 3.6E-13 101.2 8.9 97 275-376 59-167 (223)
265 3dou_A Ribosomal RNA large sub 98.8 1.9E-08 6.7E-13 98.3 10.6 105 258-377 12-140 (191)
266 2avn_A Ubiquinone/menaquinone 98.8 6.8E-09 2.3E-13 105.4 7.6 97 520-623 56-153 (260)
267 3grz_A L11 mtase, ribosomal pr 98.8 1.4E-08 4.8E-13 99.0 9.5 116 520-647 62-185 (205)
268 2gpy_A O-methyltransferase; st 98.8 4.7E-09 1.6E-13 104.7 6.2 97 275-376 55-160 (233)
269 2b2c_A Spermidine synthase; be 98.8 1.7E-08 5.8E-13 106.6 10.8 102 274-376 108-222 (314)
270 2o07_A Spermidine synthase; st 98.8 3.1E-08 1.1E-12 104.0 12.8 103 274-377 95-210 (304)
271 3g5t_A Trans-aconitate 3-methy 98.8 5E-09 1.7E-13 108.6 6.5 93 519-620 37-147 (299)
272 2bm8_A Cephalosporin hydroxyla 98.8 7.1E-09 2.4E-13 104.7 7.4 93 275-376 82-187 (236)
273 2b25_A Hypothetical protein; s 98.8 1.5E-08 5.2E-13 107.1 10.2 98 274-377 105-220 (336)
274 1nt2_A Fibrillarin-like PRE-rR 98.8 1.9E-08 6.5E-13 99.8 10.2 91 521-621 60-160 (210)
275 2i7c_A Spermidine synthase; tr 98.8 2.2E-08 7.5E-13 104.0 11.0 103 274-377 78-193 (283)
276 2kw5_A SLR1183 protein; struct 98.8 8.3E-09 2.9E-13 100.1 7.4 114 521-644 32-168 (202)
277 1ixk_A Methyltransferase; open 98.8 1.7E-08 5.7E-13 106.4 10.2 103 274-377 118-247 (315)
278 1fp2_A Isoflavone O-methyltran 98.8 6.4E-09 2.2E-13 110.7 6.9 93 274-377 188-289 (352)
279 2pt6_A Spermidine synthase; tr 98.8 1.6E-08 5.3E-13 107.1 9.6 114 274-388 116-242 (321)
280 3gjy_A Spermidine synthase; AP 98.8 1.1E-08 3.7E-13 108.2 8.3 101 276-377 91-201 (317)
281 1o54_A SAM-dependent O-methylt 98.8 2.3E-08 8E-13 102.6 10.6 96 274-377 112-214 (277)
282 3r3h_A O-methyltransferase, SA 98.8 5.1E-09 1.7E-13 106.2 5.4 97 275-376 61-170 (242)
283 1uir_A Polyamine aminopropyltr 98.7 1.3E-08 4.5E-13 107.2 8.7 102 274-376 77-195 (314)
284 1wzn_A SAM-dependent methyltra 98.7 1.3E-08 4.3E-13 102.3 8.0 95 520-621 43-144 (252)
285 2fca_A TRNA (guanine-N(7)-)-me 98.7 1.9E-08 6.6E-13 99.6 8.9 118 521-643 41-175 (213)
286 2p41_A Type II methyltransfera 98.7 2E-08 6.8E-13 105.7 9.5 99 274-377 82-192 (305)
287 4dmg_A Putative uncharacterize 98.7 6.9E-08 2.4E-12 105.0 13.8 109 275-384 215-334 (393)
288 2i62_A Nicotinamide N-methyltr 98.7 1.1E-08 3.7E-13 103.1 7.0 141 518-662 56-261 (265)
289 2yxd_A Probable cobalt-precorr 98.7 7.1E-08 2.4E-12 91.1 12.1 114 512-644 31-154 (183)
290 3opn_A Putative hemolysin; str 98.7 6E-08 2.1E-12 97.9 12.1 131 520-662 39-202 (232)
291 3g89_A Ribosomal RNA small sub 98.7 3E-08 1E-12 101.0 9.9 156 498-665 59-232 (249)
292 2b78_A Hypothetical protein SM 98.7 4.8E-08 1.6E-12 105.8 12.0 107 275-382 213-337 (385)
293 2aot_A HMT, histamine N-methyl 98.7 1.4E-08 4.6E-13 105.2 7.3 99 519-621 53-171 (292)
294 3ajd_A Putative methyltransfer 98.7 2.2E-08 7.4E-13 103.3 8.8 103 274-377 83-212 (274)
295 1ne2_A Hypothetical protein TA 98.7 3.9E-08 1.3E-12 95.6 10.1 91 274-374 51-145 (200)
296 3bkw_A MLL3908 protein, S-aden 98.7 1.7E-08 5.9E-13 100.3 7.7 96 520-622 45-144 (243)
297 2h00_A Methyltransferase 10 do 98.7 9.6E-09 3.3E-13 103.8 5.9 101 274-375 65-191 (254)
298 4dzr_A Protein-(glutamine-N5) 98.7 1E-08 3.5E-13 99.5 5.7 138 520-662 32-205 (215)
299 2p8j_A S-adenosylmethionine-de 98.7 7.9E-09 2.7E-13 100.5 4.9 97 520-622 25-128 (209)
300 2nxc_A L11 mtase, ribosomal pr 98.7 2.3E-08 7.8E-13 101.9 8.3 125 520-661 122-254 (254)
301 1mjf_A Spermidine synthase; sp 98.7 2.9E-08 9.8E-13 102.9 9.2 101 274-377 75-194 (281)
302 3iv6_A Putative Zn-dependent a 98.7 1E-08 3.5E-13 105.6 5.7 106 507-622 36-148 (261)
303 4fsd_A Arsenic methyltransfera 98.7 1.4E-08 4.8E-13 109.7 7.0 114 520-641 85-245 (383)
304 2vdw_A Vaccinia virus capping 98.7 7.2E-09 2.5E-13 108.7 4.4 100 520-623 50-170 (302)
305 1sui_A Caffeoyl-COA O-methyltr 98.7 2.6E-08 8.9E-13 101.3 8.3 97 275-376 80-190 (247)
306 2gs9_A Hypothetical protein TT 98.7 4.4E-08 1.5E-12 95.6 9.6 93 520-622 38-132 (211)
307 3njr_A Precorrin-6Y methylase; 98.7 6.8E-08 2.3E-12 95.1 11.0 117 511-643 50-176 (204)
308 1ve3_A Hypothetical protein PH 98.7 2.5E-08 8.7E-13 98.0 7.9 99 520-624 40-144 (227)
309 3cbg_A O-methyltransferase; cy 98.7 3.3E-08 1.1E-12 99.2 8.7 97 275-376 73-182 (232)
310 3dp7_A SAM-dependent methyltra 98.7 3.9E-08 1.3E-12 105.4 9.9 137 518-662 179-355 (363)
311 1yzh_A TRNA (guanine-N(7)-)-me 98.7 4.3E-08 1.5E-12 96.5 9.2 121 520-645 43-180 (214)
312 2hnk_A SAM-dependent O-methylt 98.7 2.6E-08 9E-13 99.9 7.5 97 275-376 61-181 (239)
313 2cmg_A Spermidine synthase; tr 98.7 9.5E-08 3.3E-12 98.3 11.8 94 274-376 72-171 (262)
314 2qm3_A Predicted methyltransfe 98.7 2.8E-07 9.4E-12 99.3 15.9 100 274-377 172-279 (373)
315 3m33_A Uncharacterized protein 98.7 1.7E-08 5.6E-13 100.5 5.6 110 520-643 50-163 (226)
316 3i53_A O-methyltransferase; CO 98.7 1.2E-07 4E-12 99.9 12.4 136 515-661 166-331 (332)
317 1wy7_A Hypothetical protein PH 98.6 1.6E-07 5.5E-12 91.4 12.3 96 274-375 49-148 (207)
318 2avd_A Catechol-O-methyltransf 98.6 3.5E-08 1.2E-12 97.7 7.7 97 275-376 70-179 (229)
319 3ckk_A TRNA (guanine-N(7)-)-me 98.6 3.9E-08 1.3E-12 99.4 8.1 118 520-642 48-190 (235)
320 3c0k_A UPF0064 protein YCCW; P 98.6 1.2E-07 4E-12 102.9 12.5 107 275-382 221-345 (396)
321 2g72_A Phenylethanolamine N-me 98.6 2.5E-08 8.4E-13 102.9 6.8 120 520-644 73-253 (289)
322 2b3t_A Protein methyltransfera 98.6 5.4E-08 1.8E-12 99.9 9.3 132 520-661 111-275 (276)
323 2ip2_A Probable phenazine-spec 98.6 2.2E-07 7.7E-12 97.6 14.1 130 520-661 169-333 (334)
324 3g07_A 7SK snRNA methylphospha 98.6 7.9E-09 2.7E-13 107.4 2.9 97 520-621 48-219 (292)
325 3orh_A Guanidinoacetate N-meth 98.6 7.3E-09 2.5E-13 104.4 2.5 98 520-621 62-169 (236)
326 3fpf_A Mtnas, putative unchara 98.6 4.5E-08 1.5E-12 102.5 8.0 135 510-661 116-263 (298)
327 1zg3_A Isoflavanone 4'-O-methy 98.6 2.3E-08 7.9E-13 106.7 6.0 92 275-377 194-294 (358)
328 3r0q_C Probable protein argini 98.6 6.5E-08 2.2E-12 104.4 9.5 97 520-621 65-168 (376)
329 3mcz_A O-methyltransferase; ad 98.6 1.9E-07 6.4E-12 99.0 12.8 135 519-662 180-349 (352)
330 1zq9_A Probable dimethyladenos 98.6 6E-08 2.1E-12 100.7 8.8 108 257-372 15-143 (285)
331 4a6d_A Hydroxyindole O-methylt 98.6 8.8E-08 3E-12 102.4 10.1 99 274-377 179-284 (353)
332 1nv8_A HEMK protein; class I a 98.6 9E-08 3.1E-12 99.4 9.9 116 254-376 107-249 (284)
333 3q87_B N6 adenine specific DNA 98.6 1.5E-07 5.1E-12 89.8 10.7 126 521-660 26-160 (170)
334 2yxl_A PH0851 protein, 450AA l 98.6 1.1E-07 3.8E-12 105.0 11.1 103 274-377 259-390 (450)
335 3frh_A 16S rRNA methylase; met 98.6 1E-07 3.4E-12 96.8 9.7 101 273-375 104-205 (253)
336 3ntv_A MW1564 protein; rossman 98.6 5.6E-08 1.9E-12 97.4 7.9 126 520-662 73-231 (232)
337 1l3i_A Precorrin-6Y methyltran 98.6 3.2E-08 1.1E-12 94.1 5.8 119 511-643 28-156 (192)
338 1sqg_A SUN protein, FMU protei 98.6 8.6E-08 3E-12 105.2 10.1 103 274-377 246-375 (429)
339 2r3s_A Uncharacterized protein 98.6 1.3E-07 4.4E-12 99.2 11.0 135 518-662 165-335 (335)
340 3tm4_A TRNA (guanine N2-)-meth 98.6 5.9E-08 2E-12 104.6 8.6 100 274-376 217-329 (373)
341 1zx0_A Guanidinoacetate N-meth 98.6 1E-08 3.6E-13 102.5 2.3 100 520-623 62-171 (236)
342 1wxx_A TT1595, hypothetical pr 98.6 9.1E-08 3.1E-12 103.4 9.8 107 275-382 210-331 (382)
343 2as0_A Hypothetical protein PH 98.6 1.2E-07 4.1E-12 102.8 10.7 108 274-382 217-341 (396)
344 2plw_A Ribosomal RNA methyltra 98.6 1.5E-07 5E-12 91.2 10.3 132 520-661 24-195 (201)
345 3bgv_A MRNA CAP guanine-N7 met 98.6 3.1E-08 1.1E-12 103.4 5.8 102 519-624 35-157 (313)
346 3lec_A NADB-rossmann superfami 98.6 1.3E-07 4.5E-12 95.5 10.1 109 258-376 11-125 (230)
347 1ej0_A FTSJ; methyltransferase 98.6 2.8E-07 9.5E-12 85.9 11.7 131 521-661 25-177 (180)
348 3lcv_B Sisomicin-gentamicin re 98.6 2E-07 6.9E-12 95.6 11.4 100 274-375 132-235 (281)
349 3c3y_A Pfomt, O-methyltransfer 98.6 8.7E-08 3E-12 96.5 8.6 97 275-376 71-181 (237)
350 3lpm_A Putative methyltransfer 98.6 1.6E-07 5.4E-12 95.6 10.5 120 520-643 51-197 (259)
351 3v97_A Ribosomal RNA large sub 98.6 9.5E-08 3.3E-12 111.3 10.0 102 275-377 540-658 (703)
352 3gwz_A MMCR; methyltransferase 98.6 2.5E-07 8.5E-12 99.3 12.5 136 516-662 200-369 (369)
353 3kr9_A SAM-dependent methyltra 98.6 1.3E-07 4.5E-12 95.2 9.6 107 259-376 6-119 (225)
354 2frn_A Hypothetical protein PH 98.6 6.7E-08 2.3E-12 99.8 7.7 111 521-643 128-253 (278)
355 3gnl_A Uncharacterized protein 98.6 1.4E-07 4.7E-12 96.2 9.9 109 258-376 11-125 (244)
356 2yx1_A Hypothetical protein MJ 98.6 2.5E-07 8.6E-12 98.3 12.3 94 274-377 195-292 (336)
357 1ri5_A MRNA capping enzyme; me 98.6 2.4E-08 8.4E-13 102.3 4.1 100 520-623 66-175 (298)
358 3lst_A CALO1 methyltransferase 98.6 3.2E-07 1.1E-11 97.5 12.6 135 516-661 182-347 (348)
359 3mq2_A 16S rRNA methyltransfer 98.6 8.9E-08 3.1E-12 94.2 7.5 116 520-644 29-181 (218)
360 2h1r_A Dimethyladenosine trans 98.6 1.8E-07 6E-12 97.9 10.2 87 257-351 29-118 (299)
361 1qzz_A RDMB, aclacinomycin-10- 98.5 1.9E-07 6.5E-12 99.6 10.5 138 518-662 182-356 (374)
362 3k6r_A Putative transferase PH 98.5 2.2E-07 7.5E-12 96.5 10.5 117 247-376 104-225 (278)
363 3bkx_A SAM-dependent methyltra 98.5 1.9E-07 6.5E-12 94.9 9.9 101 511-622 38-159 (275)
364 2y1w_A Histone-arginine methyl 98.5 2E-07 6.9E-12 99.4 10.4 96 520-621 52-154 (348)
365 1g6q_1 HnRNP arginine N-methyl 98.5 1.8E-07 6.3E-12 98.9 9.8 95 521-620 41-143 (328)
366 2fyt_A Protein arginine N-meth 98.5 2E-07 7E-12 99.1 10.1 95 520-619 66-168 (340)
367 3q7e_A Protein arginine N-meth 98.5 8.3E-08 2.8E-12 102.5 7.0 97 520-621 68-172 (349)
368 3p2e_A 16S rRNA methylase; met 98.5 4.6E-08 1.6E-12 98.1 4.7 122 520-644 26-182 (225)
369 2bm8_A Cephalosporin hydroxyla 98.5 1.2E-07 4E-12 95.7 7.8 112 520-642 83-214 (236)
370 2frx_A Hypothetical protein YE 98.5 1.8E-07 6.3E-12 104.2 10.0 103 274-377 117-247 (479)
371 3tfw_A Putative O-methyltransf 98.5 2.4E-07 8.1E-12 93.9 10.0 131 520-662 65-225 (248)
372 3dou_A Ribosomal RNA large sub 98.5 2.2E-07 7.7E-12 90.7 9.4 133 520-661 27-180 (191)
373 3m6w_A RRNA methylase; rRNA me 98.5 9.2E-08 3.1E-12 106.1 7.4 103 274-377 101-230 (464)
374 2pwy_A TRNA (adenine-N(1)-)-me 98.5 6E-07 2.1E-11 90.1 12.8 117 509-641 89-218 (258)
375 1tw3_A COMT, carminomycin 4-O- 98.5 3E-07 1E-11 97.7 11.0 138 518-662 183-356 (360)
376 1x19_A CRTF-related protein; m 98.5 2.9E-07 9.9E-12 98.1 10.9 133 518-662 190-359 (359)
377 3r3h_A O-methyltransferase, SA 98.5 2.1E-07 7E-12 94.3 9.2 131 520-662 62-220 (242)
378 2ipx_A RRNA 2'-O-methyltransfe 98.5 2.1E-07 7.3E-12 92.7 9.1 132 520-662 79-232 (233)
379 3ggd_A SAM-dependent methyltra 98.5 4.1E-08 1.4E-12 98.2 3.7 97 520-622 58-163 (245)
380 2oxt_A Nucleoside-2'-O-methylt 98.5 1.1E-07 3.9E-12 97.9 7.1 137 520-661 76-227 (265)
381 3tr6_A O-methyltransferase; ce 98.5 8.1E-08 2.8E-12 94.8 5.7 126 520-662 66-224 (225)
382 3htx_A HEN1; HEN1, small RNA m 98.5 6.2E-07 2.1E-11 104.5 13.6 96 520-622 723-834 (950)
383 2vdv_E TRNA (guanine-N(7)-)-me 98.5 1.8E-07 6E-12 94.5 7.9 115 520-639 51-191 (246)
384 3dxy_A TRNA (guanine-N(7)-)-me 98.5 4.5E-08 1.5E-12 97.7 3.4 119 520-641 36-171 (218)
385 2f8l_A Hypothetical protein LM 98.5 4.3E-07 1.5E-11 96.5 10.6 101 274-377 130-257 (344)
386 3sso_A Methyltransferase; macr 98.5 3.7E-08 1.3E-12 106.9 1.9 123 507-641 205-361 (419)
387 1uwv_A 23S rRNA (uracil-5-)-me 98.5 6.4E-07 2.2E-11 98.4 11.8 111 257-377 273-390 (433)
388 1fbn_A MJ fibrillarin homologu 98.4 5E-07 1.7E-11 90.1 10.0 132 520-662 76-228 (230)
389 2jjq_A Uncharacterized RNA met 98.4 6E-07 2.1E-11 98.6 11.5 97 274-377 290-388 (425)
390 1yb2_A Hypothetical protein TA 98.4 5.1E-07 1.8E-11 92.6 10.2 114 511-642 105-232 (275)
391 3lbf_A Protein-L-isoaspartate 98.4 2E-07 6.9E-12 90.9 6.7 100 509-624 70-176 (210)
392 3c3p_A Methyltransferase; NP_9 98.4 2.6E-07 8.9E-12 90.5 7.5 91 520-622 58-160 (210)
393 2ozv_A Hypothetical protein AT 98.4 1.2E-06 4E-11 89.5 12.3 118 520-641 38-188 (260)
394 2ld4_A Anamorsin; methyltransf 98.4 1.6E-07 5.3E-12 89.4 5.2 108 513-645 9-133 (176)
395 2qe6_A Uncharacterized protein 98.4 1.5E-07 5.2E-12 97.2 5.4 100 518-623 77-197 (274)
396 2wa2_A Non-structural protein 98.4 2.6E-07 8.9E-12 95.8 6.6 132 520-661 84-235 (276)
397 2ift_A Putative methylase HI07 98.4 1.3E-07 4.3E-12 92.7 4.0 124 521-661 56-193 (201)
398 2p41_A Type II methyltransfera 98.4 7.5E-07 2.5E-11 93.6 10.1 99 520-621 84-190 (305)
399 3m4x_A NOL1/NOP2/SUN family pr 98.4 3.8E-07 1.3E-11 100.9 8.0 103 274-377 105-235 (456)
400 3duw_A OMT, O-methyltransferas 98.4 1.9E-07 6.7E-12 92.0 5.0 131 520-662 60-222 (223)
401 2pjd_A Ribosomal RNA small sub 98.4 4.3E-07 1.5E-11 96.5 7.9 129 521-662 199-337 (343)
402 3id6_C Fibrillarin-like rRNA/T 98.4 7.9E-07 2.7E-11 90.0 9.3 138 514-663 74-232 (232)
403 1p91_A Ribosomal RNA large sub 98.4 1.4E-07 4.8E-12 95.8 3.8 89 520-623 87-179 (269)
404 2nyu_A Putative ribosomal RNA 98.4 5.1E-07 1.7E-11 86.8 7.3 133 520-661 24-186 (196)
405 1g8a_A Fibrillarin-like PRE-rR 98.4 1E-06 3.4E-11 87.2 9.4 129 521-662 76-227 (227)
406 2gpy_A O-methyltransferase; st 98.4 3.7E-07 1.3E-11 90.9 6.2 92 520-622 56-160 (233)
407 1vbf_A 231AA long hypothetical 98.3 3.6E-07 1.2E-11 90.5 5.8 100 509-624 63-167 (231)
408 3dr5_A Putative O-methyltransf 98.3 7.4E-07 2.5E-11 89.0 7.9 126 521-663 59-214 (221)
409 3mb5_A SAM-dependent methyltra 98.3 1.1E-06 3.8E-11 88.4 9.2 112 510-638 87-211 (255)
410 1ws6_A Methyltransferase; stru 98.3 9E-08 3.1E-12 89.7 0.7 94 520-623 43-148 (171)
411 4df3_A Fibrillarin-like rRNA/T 98.3 1.1E-06 3.6E-11 89.1 8.6 99 512-622 73-182 (233)
412 2okc_A Type I restriction enzy 98.3 2.1E-06 7.2E-11 94.6 11.5 116 256-377 157-308 (445)
413 3p9n_A Possible methyltransfer 98.3 3.7E-07 1.3E-11 87.9 4.7 98 520-623 46-154 (189)
414 3reo_A (ISO)eugenol O-methyltr 98.3 5.2E-07 1.8E-11 96.8 6.3 97 516-622 201-300 (368)
415 3gru_A Dimethyladenosine trans 98.3 3.3E-06 1.1E-10 88.4 12.2 88 257-351 37-126 (295)
416 2ih2_A Modification methylase 98.3 1.4E-06 4.7E-11 94.4 9.3 108 256-377 25-165 (421)
417 1fp1_D Isoliquiritigenin 2'-O- 98.3 5.6E-07 1.9E-11 96.5 6.1 97 518-622 209-306 (372)
418 3u81_A Catechol O-methyltransf 98.3 5.2E-07 1.8E-11 89.3 5.4 134 520-662 60-213 (221)
419 1yub_A Ermam, rRNA methyltrans 98.3 3.1E-08 1.1E-12 100.2 -3.6 110 258-375 17-144 (245)
420 1ixk_A Methyltransferase; open 98.3 1.2E-06 4E-11 92.3 8.1 124 511-641 113-269 (315)
421 1o54_A SAM-dependent O-methylt 98.3 2.5E-06 8.5E-11 87.4 10.3 114 510-641 106-233 (277)
422 4hc4_A Protein arginine N-meth 98.3 1.3E-06 4.4E-11 94.5 8.4 112 503-621 66-188 (376)
423 2esr_A Methyltransferase; stru 98.3 1.8E-07 6E-12 88.9 1.3 97 520-624 33-140 (177)
424 2avd_A Catechol-O-methyltransf 98.3 7.8E-07 2.7E-11 87.9 6.1 126 520-662 71-229 (229)
425 2hnk_A SAM-dependent O-methylt 98.3 9.3E-07 3.2E-11 88.5 6.6 127 520-663 62-232 (239)
426 3bwc_A Spermidine synthase; SA 98.2 1.1E-06 3.9E-11 92.0 7.3 139 520-662 97-258 (304)
427 3p9c_A Caffeic acid O-methyltr 98.2 8.7E-07 3E-11 95.0 6.4 97 516-622 199-298 (364)
428 2b25_A Hypothetical protein; s 98.2 1.6E-06 5.5E-11 91.5 8.3 110 511-635 100-233 (336)
429 2xyq_A Putative 2'-O-methyl tr 98.2 3.3E-06 1.1E-10 88.1 10.5 90 273-377 62-172 (290)
430 1o9g_A RRNA methyltransferase; 98.2 4.9E-07 1.7E-11 91.2 4.1 103 520-625 53-217 (250)
431 3gdh_A Trimethylguanosine synt 98.2 3.2E-08 1.1E-12 99.0 -4.8 94 520-622 80-181 (241)
432 2igt_A SAM dependent methyltra 98.2 8.6E-07 2.9E-11 94.2 6.0 119 520-643 155-300 (332)
433 2yvl_A TRMI protein, hypotheti 98.2 5.9E-06 2E-10 82.3 11.7 115 509-640 84-208 (248)
434 1i9g_A Hypothetical protein RV 98.2 3E-06 1E-10 86.4 9.7 116 510-640 93-223 (280)
435 3adn_A Spermidine synthase; am 98.2 8E-06 2.7E-10 85.3 13.1 142 518-663 83-246 (294)
436 1qam_A ERMC' methyltransferase 98.2 2.3E-06 8E-11 86.7 8.6 106 256-372 16-124 (244)
437 4a6d_A Hydroxyindole O-methylt 98.2 5.2E-06 1.8E-10 88.6 11.5 139 514-662 175-346 (353)
438 2yxe_A Protein-L-isoaspartate 98.2 1.2E-06 4.2E-11 85.6 6.1 100 509-625 70-180 (215)
439 1fp2_A Isoflavone O-methyltran 98.2 8E-07 2.7E-11 94.5 5.2 131 518-661 188-352 (352)
440 3b5i_A S-adenosyl-L-methionine 98.2 3.9E-06 1.3E-10 90.6 10.4 102 275-377 53-226 (374)
441 2fhp_A Methylase, putative; al 98.2 3.6E-07 1.2E-11 86.9 1.9 96 520-623 46-155 (187)
442 1nv8_A HEMK protein; class I a 98.2 1.5E-06 5.3E-11 90.1 6.7 127 521-662 126-282 (284)
443 3a27_A TYW2, uncharacterized p 98.2 1.6E-06 5.4E-11 89.3 6.8 112 520-642 121-246 (272)
444 3cbg_A O-methyltransferase; cy 98.2 9.1E-07 3.1E-11 88.6 4.8 126 520-662 74-232 (232)
445 1sui_A Caffeoyl-COA O-methyltr 98.2 1.2E-06 4E-11 89.0 5.5 92 520-622 81-190 (247)
446 3evf_A RNA-directed RNA polyme 98.2 7.8E-06 2.7E-10 84.2 11.6 121 251-377 55-185 (277)
447 3b3j_A Histone-arginine methyl 98.2 1.6E-06 5.4E-11 96.7 6.9 95 520-620 160-261 (480)
448 2fpo_A Methylase YHHF; structu 98.2 9.1E-07 3.1E-11 86.7 4.3 97 520-624 56-162 (202)
449 1dl5_A Protein-L-isoaspartate 98.2 1.3E-06 4.3E-11 91.8 5.6 102 509-623 68-176 (317)
450 1iy9_A Spermidine synthase; ro 98.2 4.7E-06 1.6E-10 86.0 9.7 141 518-663 75-237 (275)
451 3tma_A Methyltransferase; thum 98.2 6.8E-06 2.3E-10 87.5 11.2 142 509-661 196-353 (354)
452 3bt7_A TRNA (uracil-5-)-methyl 98.2 3E-06 1E-10 91.1 8.3 107 257-376 201-326 (369)
453 1mjf_A Spermidine synthase; sp 98.2 2.2E-06 7.5E-11 88.7 6.9 136 520-662 77-239 (281)
454 1zg3_A Isoflavanone 4'-O-methy 98.1 3.4E-06 1.2E-10 89.8 8.5 130 518-661 193-358 (358)
455 3bzb_A Uncharacterized protein 98.1 2.5E-06 8.5E-11 88.1 6.6 118 520-644 81-234 (281)
456 3c3y_A Pfomt, O-methyltransfer 98.1 1.9E-06 6.4E-11 86.7 5.4 92 520-622 72-181 (237)
457 3tqs_A Ribosomal RNA small sub 98.1 6.4E-06 2.2E-10 84.4 8.6 82 257-345 16-103 (255)
458 3k0b_A Predicted N6-adenine-sp 98.1 8.8E-06 3E-10 88.4 9.9 115 257-377 188-351 (393)
459 3uwp_A Histone-lysine N-methyl 98.1 1.8E-06 6.3E-11 94.0 4.4 126 505-641 162-313 (438)
460 2cmg_A Spermidine synthase; tr 98.0 1.8E-05 6.2E-10 81.2 11.0 127 519-662 73-216 (262)
461 2qfm_A Spermine synthase; sper 98.0 4.2E-06 1.4E-10 89.8 6.3 104 273-376 187-314 (364)
462 3fut_A Dimethyladenosine trans 98.0 9.1E-06 3.1E-10 84.0 8.6 86 257-351 34-122 (271)
463 1af7_A Chemotaxis receptor met 98.0 3.3E-06 1.1E-10 87.5 5.0 100 520-623 107-253 (274)
464 3ldu_A Putative methylase; str 98.0 1.1E-05 3.7E-10 87.5 9.3 115 257-377 182-345 (385)
465 2efj_A 3,7-dimethylxanthine me 98.0 1.2E-05 4.2E-10 86.9 9.6 119 275-395 53-250 (384)
466 1inl_A Spermidine synthase; be 98.0 8.9E-06 3E-10 84.8 8.3 139 520-663 92-253 (296)
467 2xyq_A Putative 2'-O-methyl tr 98.0 1.9E-05 6.4E-10 82.5 10.6 133 513-661 60-210 (290)
468 3fzg_A 16S rRNA methylase; met 98.0 1.5E-06 5.2E-11 85.3 2.2 128 519-661 50-197 (200)
469 3gjy_A Spermidine synthase; AP 98.0 1.3E-05 4.3E-10 84.8 9.2 138 519-663 90-248 (317)
470 3ldg_A Putative uncharacterize 98.0 2.6E-05 8.7E-10 84.5 11.7 102 274-377 194-344 (384)
471 3ajd_A Putative methyltransfer 98.0 2.7E-06 9.3E-11 87.5 3.8 119 511-636 78-229 (274)
472 1i1n_A Protein-L-isoaspartate 98.0 1.2E-06 4E-11 86.6 0.9 92 520-623 79-183 (226)
473 2o07_A Spermidine synthase; st 98.0 1E-05 3.5E-10 84.9 7.9 139 519-662 96-256 (304)
474 2b2c_A Spermidine synthase; be 98.0 9.1E-06 3.1E-10 85.7 7.3 138 520-662 110-269 (314)
475 1wy7_A Hypothetical protein PH 98.0 2E-05 6.8E-10 76.5 9.1 115 520-644 51-172 (207)
476 2pt6_A Spermidine synthase; tr 97.9 1E-05 3.6E-10 85.4 7.3 139 520-663 118-278 (321)
477 2b9e_A NOL1/NOP2/SUN domain fa 97.9 3.7E-05 1.3E-09 80.8 11.3 102 274-377 102-235 (309)
478 1jg1_A PIMT;, protein-L-isoasp 97.9 6.1E-06 2.1E-10 82.3 4.9 97 509-623 84-190 (235)
479 4dmg_A Putative uncharacterize 97.9 5.7E-06 2E-10 89.9 5.0 119 521-644 217-354 (393)
480 1ne2_A Hypothetical protein TA 97.9 2E-05 6.8E-10 76.3 8.3 111 520-642 53-165 (200)
481 2qm3_A Predicted methyltransfe 97.9 1.9E-05 6.7E-10 84.8 9.0 115 520-642 174-304 (373)
482 1uir_A Polyamine aminopropyltr 97.9 9.8E-06 3.3E-10 85.2 6.5 138 520-662 79-242 (314)
483 2dul_A N(2),N(2)-dimethylguano 97.9 1E-05 3.4E-10 87.5 6.4 97 275-376 48-164 (378)
484 1u2z_A Histone-lysine N-methyl 97.9 5.5E-06 1.9E-10 91.1 4.3 109 505-623 231-360 (433)
485 2pbf_A Protein-L-isoaspartate 97.9 2.5E-06 8.6E-11 84.2 1.4 93 520-623 82-194 (227)
486 1xj5_A Spermidine synthase 1; 97.9 1.6E-05 5.5E-10 84.5 7.7 99 519-621 121-234 (334)
487 2h00_A Methyltransferase 10 do 97.9 2.4E-06 8.1E-11 86.1 0.9 96 520-620 67-190 (254)
488 1m6e_X S-adenosyl-L-methionnin 97.9 1.4E-05 4.9E-10 85.7 6.9 120 275-395 52-238 (359)
489 2ar0_A M.ecoki, type I restric 97.9 1.9E-05 6.5E-10 89.2 8.3 116 257-377 156-313 (541)
490 2b78_A Hypothetical protein SM 97.8 1.1E-05 3.7E-10 87.3 5.4 117 520-640 214-355 (385)
491 2yxl_A PH0851 protein, 450AA l 97.8 4.9E-05 1.7E-09 83.8 10.6 124 511-641 254-413 (450)
492 2i7c_A Spermidine synthase; tr 97.8 2E-05 6.7E-10 81.6 6.8 140 519-662 79-239 (283)
493 3o4f_A Spermidine synthase; am 97.8 0.00011 3.8E-09 76.6 12.3 117 273-390 82-212 (294)
494 1sqg_A SUN protein, FMU protei 97.8 4.2E-05 1.5E-09 83.7 9.0 122 511-637 241-393 (429)
495 2frx_A Hypothetical protein YE 97.8 2.6E-05 9E-10 86.8 7.3 113 521-638 120-266 (479)
496 3axs_A Probable N(2),N(2)-dime 97.8 2.9E-05 9.8E-10 84.4 7.4 96 275-376 53-158 (392)
497 4gqb_A Protein arginine N-meth 97.8 6E-05 2E-09 86.4 10.1 115 256-373 335-464 (637)
498 1wxx_A TT1595, hypothetical pr 97.8 8.8E-06 3E-10 87.7 3.1 120 520-644 211-353 (382)
499 3c0k_A UPF0064 protein YCCW; P 97.8 1.2E-05 4E-10 87.2 3.9 119 520-642 222-365 (396)
500 3kr9_A SAM-dependent methyltra 97.7 4.2E-05 1.4E-09 76.9 7.6 129 520-661 17-157 (225)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.56 E-value=4.3e-15 Score=152.81 Aligned_cols=117 Identities=16% Similarity=0.263 Sum_probs=88.3
Q ss_pred HHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCC
Q 005981 258 YLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYP 335 (666)
Q Consensus 258 ~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~ 335 (666)
.++.|.+..+ ...+|||||||+|.++..|++. +|+|+|+|+.|+..+ ++ .....+...+++.++++
T Consensus 29 l~~~l~~~~~------~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a-----~~-~~~v~~~~~~~e~~~~~ 96 (257)
T 4hg2_A 29 LFRWLGEVAP------ARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQA-----LR-HPRVTYAVAPAEDTGLP 96 (257)
T ss_dssp HHHHHHHHSS------CSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTC-----CC-CTTEEEEECCTTCCCCC
T ss_pred HHHHHHHhcC------CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhh-----hh-cCCceeehhhhhhhccc
Confidence 4445554443 2368999999999999999987 999999999877543 22 22345566678999999
Q ss_pred CCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHH
Q 005981 336 SQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEE 388 (666)
Q Consensus 336 d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~P~~~~~~el~~ 388 (666)
+++||+|+|+.++ ||. +...+++++.|+|||||.|++.+........++..
T Consensus 97 ~~sfD~v~~~~~~-h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~~~~~~~~~ 147 (257)
T 4hg2_A 97 PASVDVAIAAQAM-HWF-DLDRFWAELRRVARPGAVFAAVTYGLTRVDPEVDA 147 (257)
T ss_dssp SSCEEEEEECSCC-TTC-CHHHHHHHHHHHEEEEEEEEEEEECCCBCCHHHHH
T ss_pred CCcccEEEEeeeh-hHh-hHHHHHHHHHHHcCCCCEEEEEECCCCCCCHHHHH
Confidence 9999999998875 663 68899999999999999999886533333344443
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.55 E-value=1.9e-14 Score=148.21 Aligned_cols=101 Identities=15% Similarity=0.168 Sum_probs=79.0
Q ss_pred CCCCeEEEECCCCchhHHHhccC------CeEEEeCCcchHHHHHHHHHHHcCC--CceEEeecccCCCCCCCCeeEEEe
Q 005981 273 HHIRVVMDAGCGVASFGAYLLPR------NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLPYPSQAFDLIHC 344 (666)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~------~V~gvDiS~~~l~~a~~~~a~~rg~--~~~~~~~d~e~Lpf~d~sFDlVv~ 344 (666)
.++.+|||||||+|.++..|+++ +|+|+|+|+.|+..|+.+... .+. ...+...|+..+|++ .||+|+|
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~-~~~~~~v~~~~~D~~~~~~~--~~d~v~~ 145 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDA-YKAPTPVDVIEGDIRDIAIE--NASMVVL 145 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHT-SCCSSCEEEEESCTTTCCCC--SEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHh-hccCceEEEeeccccccccc--cccccee
Confidence 45679999999999998888753 799999999999888754433 333 334556678888764 6999999
Q ss_pred cccccccccCh--HHHHHHHHHhccCCeEEEEEEC
Q 005981 345 SRCRINWTRDD--GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 345 s~~l~h~~~d~--~~~L~el~RvLkPGG~lv~st~ 377 (666)
+.+++++ ++. ..+|++++|+|||||.|+++..
T Consensus 146 ~~~l~~~-~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 146 NFTLQFL-EPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp ESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeeeeec-CchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 8876665 433 4789999999999999999875
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.53 E-value=5.8e-14 Score=142.55 Aligned_cols=113 Identities=13% Similarity=0.277 Sum_probs=90.2
Q ss_pred HHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCCCC
Q 005981 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYP 335 (666)
Q Consensus 259 i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lpf~ 335 (666)
++.+.+.+.. .+..+|||||||+|.++..|++. +|+|+|+++.++..++.. +...+.. ..+...|++.+|++
T Consensus 26 ~~~l~~~l~~----~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~-~~~~~~~~v~~~~~d~~~l~~~ 100 (260)
T 1vl5_A 26 LAKLMQIAAL----KGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAF-IEGNGHQQVEYVQGDAEQMPFT 100 (260)
T ss_dssp HHHHHHHHTC----CSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHH-HHHTTCCSEEEEECCC-CCCSC
T ss_pred HHHHHHHhCC----CCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHH-HHhcCCCceEEEEecHHhCCCC
Confidence 3455555542 34579999999999999999876 899999999999887643 4444544 34556678889999
Q ss_pred CCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 336 SQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 336 d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++||+|+|+.+++|+ +++..+|.++.|+|||||.+++...
T Consensus 101 ~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 101 DERFHIVTCRIAAHHF-PNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp TTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEEEEEEhhhhHhc-CCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 9999999999887777 8899999999999999999999754
No 4
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=8.5e-14 Score=140.52 Aligned_cols=184 Identities=14% Similarity=0.073 Sum_probs=114.6
Q ss_pred HHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCC
Q 005981 258 YLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP 333 (666)
Q Consensus 258 ~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lp 333 (666)
....+.+.+.. .+..+|||||||+|.++..+++. +|+++|+++.++..++.. .....+...|.+.++
T Consensus 21 ~~~~l~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~ 91 (259)
T 2p35_A 21 PARDLLAQVPL----ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWK 91 (259)
T ss_dssp HHHHHHTTCCC----SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCC
T ss_pred HHHHHHHhcCC----CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcC
Confidence 34456665542 34578999999999988887753 899999999888655432 233455666778888
Q ss_pred CCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHHHHHHHhhhhhhhhhhhhcCceEE
Q 005981 334 YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHWKEMLDLTTRLCWELVKKEGYIAI 413 (666)
Q Consensus 334 f~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~P~~~~~~el~~~w~~~~~l~~~l~W~~v~~~g~~~i 413 (666)
++++||+|+|+.+++|+ ++...+|+++.++|||||.++++++...... ....+..+. ....|...........
T Consensus 92 -~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~ 164 (259)
T 2p35_A 92 -PAQKADLLYANAVFQWV-PDHLAVLSQLMDQLESGGVLAVQMPDNLQEP--THIAMHETA---DGGPWKDAFSGGGLRR 164 (259)
T ss_dssp -CSSCEEEEEEESCGGGS-TTHHHHHHHHGGGEEEEEEEEEEEECCTTSH--HHHHHHHHH---HHSTTGGGC-------
T ss_pred -ccCCcCEEEEeCchhhC-CCHHHHHHHHHHhcCCCeEEEEEeCCCCCcH--HHHHHHHHh---cCcchHHHhccccccc
Confidence 77899999998875555 8899999999999999999999975222221 112222221 1122433211100001
Q ss_pred eec-CCchhhhHHhhcCCCCCcCCCCCCcceeeeecchhhhcccCCCC
Q 005981 414 WKK-PTNNSCYLNREAGTIPPLCDPDDNPDNVWYVDLKACITRLPENG 460 (666)
Q Consensus 414 ~~k-pl~~~c~~lr~aGf~~p~c~~~~~~~~~wY~~l~~~l~~L~~~g 460 (666)
+.. ...+...+++++||.+... +......|.+...++..++..+
T Consensus 165 ~~~~~~~~~~~~l~~aGf~v~~~---~~~~~~~~~~~~~~~~~l~~~~ 209 (259)
T 2p35_A 165 KPLPPPSDYFNALSPKSSRVDVW---HTVYNHPMKDADSIVEWVKGTG 209 (259)
T ss_dssp CCCCCHHHHHHHHGGGEEEEEEE---EEEEEEEESCHHHHHHHHTTTT
T ss_pred cCCCCHHHHHHHHHhcCCceEEE---EEEeeeccCCchHHhhhhhcCc
Confidence 111 1123456788899953222 2334445667777777777444
No 5
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.50 E-value=3.8e-14 Score=142.37 Aligned_cols=117 Identities=15% Similarity=0.122 Sum_probs=86.9
Q ss_pred cHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccC
Q 005981 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR 331 (666)
Q Consensus 254 g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~ 331 (666)
....+.+.+.+.++.+ .+..+|||||||+|.++..+++. +|+|+|+++.++..+ +++ ..+...+...
T Consensus 24 ~~~~~~~~~~~~l~~~---~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a-----~~~---~~~~~~d~~~ 92 (240)
T 3dli_A 24 SRELVKARLRRYIPYF---KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFC-----EGK---FNVVKSDAIE 92 (240)
T ss_dssp CHHHHHHHHGGGGGGT---TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHH-----HTT---SEEECSCHHH
T ss_pred CHHHHHHHHHHHHhhh---cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHH-----Hhh---cceeeccHHH
Confidence 3445556666666543 34578999999999999888765 899999999876544 333 2344445444
Q ss_pred C--CCCCCCeeEEEecccccccccC--hHHHHHHHHHhccCCeEEEEEECCCCCCH
Q 005981 332 L--PYPSQAFDLIHCSRCRINWTRD--DGILLLEVNRMLRAGGYFAWAAQPVYKHE 383 (666)
Q Consensus 332 L--pf~d~sFDlVv~s~~l~h~~~d--~~~~L~el~RvLkPGG~lv~st~P~~~~~ 383 (666)
+ ++++++||+|+|..+++|+ .+ ...+++++.|+|||||++++.++ .....
T Consensus 93 ~~~~~~~~~fD~i~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~-~~~~~ 146 (240)
T 3dli_A 93 YLKSLPDKYLDGVMISHFVEHL-DPERLFELLSLCYSKMKYSSYIVIESP-NPTSL 146 (240)
T ss_dssp HHHTSCTTCBSEEEEESCGGGS-CGGGHHHHHHHHHHHBCTTCCEEEEEE-CTTSH
T ss_pred HhhhcCCCCeeEEEECCchhhC-CcHHHHHHHHHHHHHcCCCcEEEEEeC-Ccchh
Confidence 3 7788999999999988887 53 47999999999999999999875 34433
No 6
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.49 E-value=5e-13 Score=130.60 Aligned_cols=116 Identities=14% Similarity=0.173 Sum_probs=91.9
Q ss_pred HHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecc
Q 005981 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFAT 329 (666)
Q Consensus 255 ~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~ 329 (666)
.....+.+.+.+.. ...+|||||||+|.++..+++. +|+++|+++.++..++... ...+.. ..+...+.
T Consensus 29 ~~~~~~~~~~~~~~-----~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~-~~~~~~~~~~~~~~d~ 102 (219)
T 3dlc_A 29 YPIIAENIINRFGI-----TAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNI-ADANLNDRIQIVQGDV 102 (219)
T ss_dssp HHHHHHHHHHHHCC-----CEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHH-HHTTCTTTEEEEECBT
T ss_pred cHHHHHHHHHhcCC-----CCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHH-HhccccCceEEEEcCH
Confidence 44455666665541 2238999999999999888764 8999999999998876544 334432 35566678
Q ss_pred cCCCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 330 RRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 330 e~Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
..+++++++||+|+|+.+++|+ .+...+++++.++|||||.++++..
T Consensus 103 ~~~~~~~~~~D~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 103 HNIPIEDNYADLIVSRGSVFFW-EDVATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp TBCSSCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHCCCCcccccEEEECchHhhc-cCHHHHHHHHHHhCCCCCEEEEEec
Confidence 8889989999999999987777 8899999999999999999999863
No 7
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.48 E-value=1.8e-13 Score=139.55 Aligned_cols=120 Identities=24% Similarity=0.351 Sum_probs=94.7
Q ss_pred cccHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEe
Q 005981 252 IHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAA 326 (666)
Q Consensus 252 ~~g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~ 326 (666)
........+.+.+.+.. .+..+|||||||+|.++..+++. +|+|+|+++.++..++.. +...++. ..+..
T Consensus 43 ~~~~~~~~~~l~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~~~ 117 (273)
T 3bus_A 43 DDATDRLTDEMIALLDV----RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANAR-ATAAGLANRVTFSY 117 (273)
T ss_dssp HHHHHHHHHHHHHHSCC----CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEE
T ss_pred HHHHHHHHHHHHHhcCC----CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHH-HHhcCCCcceEEEE
Confidence 33445566667666642 35579999999999999888753 899999999998877644 3444543 34556
Q ss_pred ecccCCCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 327 FATRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 327 ~d~e~Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.+...+++++++||+|++..+++|+ .+...+|+++.++|||||.+++.++
T Consensus 118 ~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 118 ADAMDLPFEDASFDAVWALESLHHM-PDRGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp CCTTSCCSCTTCEEEEEEESCTTTS-SCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CccccCCCCCCCccEEEEechhhhC-CCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 6788899988999999999887777 7889999999999999999999864
No 8
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.48 E-value=4.6e-13 Score=134.66 Aligned_cols=103 Identities=22% Similarity=0.352 Sum_probs=86.3
Q ss_pred CCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCCCCCCCeeEEEeccccc
Q 005981 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (666)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lpf~d~sFDlVv~s~~l~ 349 (666)
.+..+|||||||+|.++..+++. +|+++|+++.++..++... ...+.. ..+...+.+.+++++++||+|+|..+++
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 98 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFA-QEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAH 98 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHH-HHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCGG
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHH-HHcCCCCeEEEecccccCCCCCCcEEEEEECCchh
Confidence 34579999999999999999876 8999999999998776544 334443 3455667888999899999999998877
Q ss_pred ccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 350 NWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 350 h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
|+ .++..+|.++.|+|||||.+++...
T Consensus 99 ~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 99 HF-SDVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp GC-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hc-cCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 77 7889999999999999999999864
No 9
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.47 E-value=2.2e-13 Score=137.46 Aligned_cols=117 Identities=9% Similarity=0.028 Sum_probs=93.1
Q ss_pred cHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeec
Q 005981 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFA 328 (666)
Q Consensus 254 g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d 328 (666)
.....++.+.+.+.. .+..+|||||||+|.++..+++. +|+|+|+++.++..++. .+...++. ..+...+
T Consensus 20 ~~~~~~~~l~~~~~~----~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~~~v~~~~~d 94 (256)
T 1nkv_A 20 FTEEKYATLGRVLRM----KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKR-RAEELGVSERVHFIHND 94 (256)
T ss_dssp CCHHHHHHHHHHTCC----CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEESC
T ss_pred CCHHHHHHHHHhcCC----CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHH-HHHhcCCCcceEEEECC
Confidence 445667777777652 34579999999999998888753 89999999999988764 34445543 4556667
Q ss_pred ccCCCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 329 TRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 329 ~e~Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++.+++ +++||+|+|..+++|+ .+...+|+++.|+|||||.++++.+
T Consensus 95 ~~~~~~-~~~fD~V~~~~~~~~~-~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 95 AAGYVA-NEKCDVAACVGATWIA-GGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp CTTCCC-SSCEEEEEEESCGGGT-SSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred hHhCCc-CCCCCEEEECCChHhc-CCHHHHHHHHHHHcCCCeEEEEecC
Confidence 888887 7899999998887776 7889999999999999999999863
No 10
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.47 E-value=2.5e-13 Score=140.44 Aligned_cols=115 Identities=15% Similarity=0.227 Sum_probs=90.3
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR 331 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~ 331 (666)
.+++.+.+.+..+ .+..+|||||||+|.++..+++. +|+|+|+++.++..++... ...+....+...|+..
T Consensus 8 ~~~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~v~~~~~d~~~ 83 (284)
T 3gu3_A 8 DYVSFLVNTVWKI---TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELF-RLLPYDSEFLEGDATE 83 (284)
T ss_dssp HHHHHHHHTTSCC---CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHH-HSSSSEEEEEESCTTT
T ss_pred HHHHHHHHHHhcc---CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HhcCCceEEEEcchhh
Confidence 4455666665433 35589999999999999998864 7999999999887776433 3334344566667888
Q ss_pred CCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 332 LPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 332 Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++++ ++||+|+|..+++|+ .+...+++++.++|||||++++..+
T Consensus 84 ~~~~-~~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 84 IELN-DKYDIAICHAFLLHM-TTPETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp CCCS-SCEEEEEEESCGGGC-SSHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cCcC-CCeeEEEECChhhcC-CCHHHHHHHHHHHcCCCCEEEEEec
Confidence 8874 699999999887766 8889999999999999999999875
No 11
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.47 E-value=3.9e-13 Score=135.68 Aligned_cols=118 Identities=16% Similarity=0.256 Sum_probs=94.7
Q ss_pred cHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeec
Q 005981 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFA 328 (666)
Q Consensus 254 g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d 328 (666)
+.......+++.+..+ .+..+|||||||+|.++..+++. +|+|+|+++.++..++. .+...++. ..+...|
T Consensus 29 ~~~~~~~~~l~~l~~~---~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d 104 (257)
T 3f4k_A 29 GSPEATRKAVSFINEL---TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNE-NAVKANCADRVKGITGS 104 (257)
T ss_dssp CCHHHHHHHHTTSCCC---CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEECC
T ss_pred CCHHHHHHHHHHHhcC---CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHH-HHHHcCCCCceEEEECC
Confidence 4455666677777543 34579999999999999888765 89999999999887764 34445554 4556667
Q ss_pred ccCCCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 329 TRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 329 ~e~Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
...+++++++||+|+|..+++|+ +...+++++.++|||||+++++++
T Consensus 105 ~~~~~~~~~~fD~v~~~~~l~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 105 MDNLPFQNEELDLIWSEGAIYNI--GFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp TTSCSSCTTCEEEEEEESCSCCC--CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhCCCCCCCEEEEEecChHhhc--CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 88899989999999999987777 688999999999999999999863
No 12
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.46 E-value=4.5e-13 Score=136.67 Aligned_cols=118 Identities=19% Similarity=0.240 Sum_probs=95.0
Q ss_pred cHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeec
Q 005981 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFA 328 (666)
Q Consensus 254 g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d 328 (666)
+.......+++.+..+ .++.+|||||||+|.++..+++. +|+|+|+++.++..++.. +...++. ..+...|
T Consensus 29 ~~~~~~~~~l~~l~~~---~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d 104 (267)
T 3kkz_A 29 GSPEVTLKALSFIDNL---TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRN-ARQSGLQNRVTGIVGS 104 (267)
T ss_dssp CCHHHHHHHHTTCCCC---CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEECC
T ss_pred CCHHHHHHHHHhcccC---CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHH-HHHcCCCcCcEEEEcC
Confidence 3445566666766532 35589999999999999999876 899999999999887644 3445543 4556667
Q ss_pred ccCCCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 329 TRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 329 ~e~Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.+.+++++++||+|+|..+++|+ +...+++++.++|||||.+++++.
T Consensus 105 ~~~~~~~~~~fD~i~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 105 MDDLPFRNEELDLIWSEGAIYNI--GFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp TTSCCCCTTCEEEEEESSCGGGT--CHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred hhhCCCCCCCEEEEEEcCCceec--CHHHHHHHHHHHcCCCCEEEEEEe
Confidence 88899888999999999987777 788999999999999999999864
No 13
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.45 E-value=1.7e-13 Score=136.52 Aligned_cols=97 Identities=13% Similarity=0.106 Sum_probs=79.4
Q ss_pred CCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecccccccc
Q 005981 275 IRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWT 352 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~ 352 (666)
..+|||||||+|.++..+++. +|+|+|+++.++..++..... ...+...+++.+ +++++||+|+|..+++|+
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~- 116 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD----GITYIHSRFEDA-QLPRRYDNIVLTHVLEHI- 116 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGC-CCSSCEEEEEEESCGGGC-
T ss_pred CCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHc-CcCCcccEEEEhhHHHhh-
Confidence 468999999999999999877 899999999888665432211 334555566666 467899999999987777
Q ss_pred cChHHHHHHHH-HhccCCeEEEEEEC
Q 005981 353 RDDGILLLEVN-RMLRAGGYFAWAAQ 377 (666)
Q Consensus 353 ~d~~~~L~el~-RvLkPGG~lv~st~ 377 (666)
+++..+|+++. |+|||||.++++++
T Consensus 117 ~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 117 DDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp SSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 78899999999 99999999999975
No 14
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.44 E-value=4e-13 Score=139.01 Aligned_cols=120 Identities=17% Similarity=0.224 Sum_probs=94.7
Q ss_pred ccHHHHHHHHHhhcc---cccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceE
Q 005981 253 HGADQYLDQIAKMVP---DITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMV 324 (666)
Q Consensus 253 ~g~~~~i~~L~~~L~---~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~ 324 (666)
......++.+.+.++ .+ .+..+|||||||+|.++..+++. +|+|+|+++.++..++... ...++. ..+
T Consensus 61 ~~~~~~~~~l~~~l~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~~~~ 136 (297)
T 2o57_A 61 EASLRTDEWLASELAMTGVL---QRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYN-NQAGLADNITV 136 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTCC---CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HHHTCTTTEEE
T ss_pred HHHHHHHHHHHHHhhhccCC---CCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHH-HhcCCCcceEE
Confidence 344456666766661 22 34579999999999999888764 8999999999988776543 334442 345
Q ss_pred EeecccCCCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 325 AAFATRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 325 ~~~d~e~Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
...+...+|+++++||+|++..+++|+ .+...+|+++.|+|||||.++++++
T Consensus 137 ~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 137 KYGSFLEIPCEDNSYDFIWSQDAFLHS-PDKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp EECCTTSCSSCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcCcccCCCCCCCEeEEEecchhhhc-CCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 566788899999999999999998888 7789999999999999999999864
No 15
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.44 E-value=4.7e-13 Score=133.34 Aligned_cols=117 Identities=13% Similarity=0.213 Sum_probs=88.5
Q ss_pred cHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecc
Q 005981 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT 329 (666)
Q Consensus 254 g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~ 329 (666)
+.....+.+.+.+.. ..+..+|||||||+|.++..+++. +|+|+|+++.++..++.... ..+ ...+...|.
T Consensus 27 ~~~~~~~~~~~~~~~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~-~~~~~~~d~ 101 (234)
T 3dtn_A 27 CFDDFYGVSVSIASV---DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFR-GNL-KVKYIEADY 101 (234)
T ss_dssp THHHHHHHHHHTCCC---SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTC-SCT-TEEEEESCT
T ss_pred CHHHHHHHHHHHhhc---CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhc-cCC-CEEEEeCch
Confidence 344455666666653 245589999999999998888754 89999999988876653321 112 345566678
Q ss_pred cCCCCCCCCeeEEEecccccccccChH--HHHHHHHHhccCCeEEEEEEC
Q 005981 330 RRLPYPSQAFDLIHCSRCRINWTRDDG--ILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 330 e~Lpf~d~sFDlVv~s~~l~h~~~d~~--~~L~el~RvLkPGG~lv~st~ 377 (666)
..++++ ++||+|+|+.+++|+ .+.. .+++++.|+|||||.+++++.
T Consensus 102 ~~~~~~-~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 102 SKYDFE-EKYDMVVSALSIHHL-EDEDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp TTCCCC-SCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hccCCC-CCceEEEEeCccccC-CHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 888877 899999999987777 5444 699999999999999999975
No 16
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.44 E-value=7.5e-14 Score=140.53 Aligned_cols=115 Identities=17% Similarity=0.221 Sum_probs=87.1
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP 333 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lp 333 (666)
.++..+++.+.. ....+|||||||+|.++..|+.. +|+++|+++.++..++..... . ....+...+...++
T Consensus 80 ~~~~~~l~~l~~----~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-~-~~~~~~~~d~~~~~ 153 (254)
T 1xtp_A 80 EGSRNFIASLPG----HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG-M-PVGKFILASMETAT 153 (254)
T ss_dssp HHHHHHHHTSTT----CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT-S-SEEEEEESCGGGCC
T ss_pred HHHHHHHHhhcc----cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhcc-C-CceEEEEccHHHCC
Confidence 344555555531 34579999999999999888764 699999999988766543221 1 22345555778888
Q ss_pred CCCCCeeEEEecccccccc-cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 334 YPSQAFDLIHCSRCRINWT-RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 334 f~d~sFDlVv~s~~l~h~~-~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++++||+|+|..+++|+. .+...+|+++.++|||||++++++.
T Consensus 154 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 154 LPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 8889999999999877774 2467999999999999999999874
No 17
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.43 E-value=5.6e-13 Score=131.38 Aligned_cols=104 Identities=14% Similarity=0.212 Sum_probs=81.6
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEeccccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINW 351 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~ 351 (666)
+..+|||||||+|.++..+++. +|+|+|+++.++..++.... ....+...++..++++ ++||+|+|..+++|+
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~ 119 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEVP-TSIDTIVSTYAFHHL 119 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCCC-SCCSEEEEESCGGGS
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCCC-CCeEEEEECcchhcC
Confidence 3479999999999999998876 89999999988765543221 1334555678888887 999999999887777
Q ss_pred ccChHH--HHHHHHHhccCCeEEEEEECCCCCCHH
Q 005981 352 TRDDGI--LLLEVNRMLRAGGYFAWAAQPVYKHEE 384 (666)
Q Consensus 352 ~~d~~~--~L~el~RvLkPGG~lv~st~P~~~~~~ 384 (666)
.+... +|+++.|+|||||.++++++ ......
T Consensus 120 -~~~~~~~~l~~~~~~LkpgG~l~i~~~-~~~~~~ 152 (220)
T 3hnr_A 120 -TDDEKNVAIAKYSQLLNKGGKIVFADT-IFADQD 152 (220)
T ss_dssp -CHHHHHHHHHHHHHHSCTTCEEEEEEE-CBSSHH
T ss_pred -ChHHHHHHHHHHHHhcCCCCEEEEEec-cccChH
Confidence 66655 99999999999999999974 344433
No 18
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.43 E-value=7.1e-13 Score=131.16 Aligned_cols=107 Identities=20% Similarity=0.278 Sum_probs=84.3
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCC------CceEEeecccCCCCCCCCeeEEEec
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA------PAMVAAFATRRLPYPSQAFDLIHCS 345 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~------~~~~~~~d~e~Lpf~d~sFDlVv~s 345 (666)
+..+|||+|||+|.++..++.. +|+++|+++.++..++.. +...++ ...+...+...+++++++||+|+++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETA-ARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH-TTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHH-HHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 3479999999999999988876 899999999888766532 222333 1245555778888888999999999
Q ss_pred ccccccccChH---HHHHHHHHhccCCeEEEEEECCCCCC
Q 005981 346 RCRINWTRDDG---ILLLEVNRMLRAGGYFAWAAQPVYKH 382 (666)
Q Consensus 346 ~~l~h~~~d~~---~~L~el~RvLkPGG~lv~st~P~~~~ 382 (666)
.+++|+ .++. .+++++.++|||||.+++.++.....
T Consensus 109 ~~l~~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 147 (235)
T 3sm3_A 109 AFLTSV-PDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWH 147 (235)
T ss_dssp SCGGGC-CCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTT
T ss_pred chhhcC-CCHHHHHHHHHHHHHHcCCCeEEEEEECCcchh
Confidence 887777 6666 89999999999999999997644333
No 19
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.42 E-value=9.4e-13 Score=134.64 Aligned_cols=102 Identities=18% Similarity=0.307 Sum_probs=84.4
Q ss_pred CCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCCCCCCCeeEEEeccc
Q 005981 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYPSQAFDLIHCSRC 347 (666)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lpf~d~sFDlVv~s~~ 347 (666)
.+..+|||||||+|.++..+++. +|+++|+++.++..++... ...+.. ..+...|...+++++++||+|+++.+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENT-EKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH-HHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 35679999999999999888754 8999999999988776443 344543 44556678888988999999999988
Q ss_pred ccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 348 RINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 348 l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
++|+ .++..+++++.++|||||++++..
T Consensus 115 l~~~-~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 115 LEHL-QSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp GGGC-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhc-CCHHHHHHHHHHHcCCCcEEEEEE
Confidence 7776 888999999999999999999985
No 20
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.42 E-value=7.6e-13 Score=133.63 Aligned_cols=101 Identities=17% Similarity=0.187 Sum_probs=82.1
Q ss_pred CCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecccccc
Q 005981 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (666)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h 350 (666)
.+..+|||||||+|.++..+++. +|+|+|+++.++..++... ........+...+.+.+++++++||+|+++.+++|
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 116 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHL 116 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCCCCCCeeEEEECCchhh
Confidence 34579999999999999998876 8999999999887765433 11122345566678888988899999999888555
Q ss_pred cccChHHHHHHHHHhccCCeEEEEE
Q 005981 351 WTRDDGILLLEVNRMLRAGGYFAWA 375 (666)
Q Consensus 351 ~~~d~~~~L~el~RvLkPGG~lv~s 375 (666)
+ ++...+++++.|+|||||.+++.
T Consensus 117 ~-~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 117 V-PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp C-TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred c-CCHHHHHHHHHHHCCCCcEEEEE
Confidence 5 78899999999999999999987
No 21
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.41 E-value=5.9e-13 Score=134.38 Aligned_cols=110 Identities=17% Similarity=0.297 Sum_probs=87.2
Q ss_pred HHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCC
Q 005981 260 DQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPS 336 (666)
Q Consensus 260 ~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d 336 (666)
..+.+.+.. .+..+|||||||+|.++..+++. +|+|+|+++.++..++.... .....+...++..+++++
T Consensus 34 ~~l~~~~~~----~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~ 106 (253)
T 3g5l_A 34 HELKKMLPD----FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAIEP 106 (253)
T ss_dssp HHHHTTCCC----CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCCCT
T ss_pred HHHHHhhhc----cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCCCC
Confidence 344555542 35579999999999999988865 79999999988766543222 233456666788899888
Q ss_pred CCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 337 QAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 337 ~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++||+|+|+.+++|+ .+...+|+++.++|||||.++++..
T Consensus 107 ~~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 107 DAYNVVLSSLALHYI-ASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp TCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeEEEEEchhhhhh-hhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 999999999987777 8899999999999999999999853
No 22
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.41 E-value=1.9e-13 Score=134.82 Aligned_cols=103 Identities=9% Similarity=-0.031 Sum_probs=78.5
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHH------------cCCCceEEeecccCCCCCC-CC
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALE------------RGAPAMVAAFATRRLPYPS-QA 338 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~------------rg~~~~~~~~d~e~Lpf~d-~s 338 (666)
...+|||+|||+|..+..|+++ +|+|+|+|+.|+..++.+.... ......+...|+..+++++ ++
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~ 101 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGH 101 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHS
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCC
Confidence 4579999999999999999865 8999999999998776432210 1223456667788888765 89
Q ss_pred eeEEEecccccccccC-hHHHHHHHHHhccCCeEEEEEE
Q 005981 339 FDLIHCSRCRINWTRD-DGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 339 FDlVv~s~~l~h~~~d-~~~~L~el~RvLkPGG~lv~st 376 (666)
||+|++..+++|+..+ ...+++++.|+|||||.+++.+
T Consensus 102 fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 102 CAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred EEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 9999998887776422 3478999999999999855543
No 23
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.40 E-value=4e-13 Score=135.72 Aligned_cols=119 Identities=15% Similarity=0.199 Sum_probs=89.5
Q ss_pred ccHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecc
Q 005981 253 HGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT 329 (666)
Q Consensus 253 ~g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~ 329 (666)
.+.....+.+.+.+.. .++.+|||||||+|.++..+++. +|+|+|+++.++..++...... ....+...|.
T Consensus 38 ~~~~~~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~ 111 (266)
T 3ujc_A 38 SGGLEATKKILSDIEL----NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN--NKIIFEANDI 111 (266)
T ss_dssp TTHHHHHHHHTTTCCC----CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCT
T ss_pred cchHHHHHHHHHhcCC----CCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECcc
Confidence 3444555666666541 35579999999999999888764 8999999998775554221111 2334556678
Q ss_pred cCCCCCCCCeeEEEecccccccc-cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 330 RRLPYPSQAFDLIHCSRCRINWT-RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 330 e~Lpf~d~sFDlVv~s~~l~h~~-~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
..+++++++||+|+|..+++|+. .+...+|+++.|+|||||.+++.++
T Consensus 112 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 112 LTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp TTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 88899899999999998877763 4567999999999999999999864
No 24
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.40 E-value=5e-13 Score=133.49 Aligned_cols=110 Identities=18% Similarity=0.206 Sum_probs=87.2
Q ss_pred HHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCC
Q 005981 258 YLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYP 335 (666)
Q Consensus 258 ~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~ 335 (666)
.++.+.+.++ +..+|||||||+|.++..+++. +|+|+|+++.++..++... ......+...+...++++
T Consensus 43 ~~~~l~~~~~------~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~ 113 (242)
T 3l8d_A 43 IIPFFEQYVK------KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLPFE 113 (242)
T ss_dssp HHHHHHHHSC------TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCSSC
T ss_pred HHHHHHHHcC------CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCCCC
Confidence 3455555553 3469999999999999999876 8999999998775543221 122345566678888988
Q ss_pred CCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 336 SQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 336 d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++||+|+|..+++|+ +++..+++++.++|||||.+++++.
T Consensus 114 ~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 114 NEQFEAIMAINSLEWT-EEPLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp TTCEEEEEEESCTTSS-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCccEEEEcChHhhc-cCHHHHHHHHHHHhCCCeEEEEEEc
Confidence 9999999999987777 8889999999999999999999974
No 25
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.40 E-value=1e-12 Score=129.33 Aligned_cols=102 Identities=19% Similarity=0.218 Sum_probs=84.4
Q ss_pred CCCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCCCCCCCeeEEEeccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYPSQAFDLIHCSRC 347 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lpf~d~sFDlVv~s~~ 347 (666)
...+|||+|||+|.++..+++. +|+++|+++.++..++..... .++. ..+...+...+++++++||+|+++.+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 115 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNK-LGLKNVEVLKSEENKIPLPDNTVDFIFMAFT 115 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-HTCTTEEEEECBTTBCSSCSSCEEEEEEESC
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHH-cCCCcEEEEecccccCCCCCCCeeEEEeehh
Confidence 4579999999999888877643 899999999999888755443 3433 45566678888888899999999998
Q ss_pred ccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 348 RINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 348 l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++|+ .+...+++++.++|||||.+++.+.
T Consensus 116 l~~~-~~~~~~l~~~~~~LkpgG~l~i~~~ 144 (219)
T 3dh0_A 116 FHEL-SEPLKFLEELKRVAKPFAYLAIIDW 144 (219)
T ss_dssp GGGC-SSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhc-CCHHHHHHHHHHHhCCCeEEEEEEe
Confidence 7777 7889999999999999999999864
No 26
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.39 E-value=2.5e-13 Score=146.95 Aligned_cols=171 Identities=16% Similarity=0.129 Sum_probs=110.0
Q ss_pred CCCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHc----C----CCceEEeecccCC------CC
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALER----G----APAMVAAFATRRL------PY 334 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~r----g----~~~~~~~~d~e~L------pf 334 (666)
++.+|||||||+|.++..|++. +|+|+|+++.++..++.+..... | ....+...+++.+ ++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 4579999999999888777652 89999999999887765443321 2 2345556677776 88
Q ss_pred CCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEECCCCCCH-HHHHHHHHHHHHhhhhhhhhhhhhcCceEE
Q 005981 335 PSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKHE-EAQEEHWKEMLDLTTRLCWELVKKEGYIAI 413 (666)
Q Consensus 335 ~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~P~~~~~-~el~~~w~~~~~l~~~l~W~~v~~~g~~~i 413 (666)
++++||+|+++.+++++ .++..+|+++.|+|||||+|++++....... ...... ... |.... .+.
T Consensus 163 ~~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~-~~~--------~~~~~-~~~--- 228 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLS-TNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQD-PIL--------YGECL-GGA--- 228 (383)
T ss_dssp CTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHC-HHH--------HHTTC-TTC---
T ss_pred CCCCEEEEEEccchhcC-CCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhh-HHH--------hhccc-ccC---
Confidence 89999999998886665 8899999999999999999999864222211 111110 000 10000 000
Q ss_pred eecCCchhhhHHhhcCCCCCcCCCCCCcceeeeecchhhhcccCCCCC
Q 005981 414 WKKPTNNSCYLNREAGTIPPLCDPDDNPDNVWYVDLKACITRLPENGY 461 (666)
Q Consensus 414 ~~kpl~~~c~~lr~aGf~~p~c~~~~~~~~~wY~~l~~~l~~L~~~g~ 461 (666)
....+...+++++||..... ....+....+..+...+..+...++
T Consensus 229 --~~~~~~~~ll~~aGF~~v~~-~~~~~~~~~~~~~~~~l~~~~~~~~ 273 (383)
T 4fsd_A 229 --LYLEDFRRLVAEAGFRDVRL-VSVGPVDVSDPQLRKLVPDVQFYSC 273 (383)
T ss_dssp --CBHHHHHHHHHHTTCCCEEE-EEEEEECCCCHHHHTTSTTCCEEEE
T ss_pred --CCHHHHHHHHHHCCCceEEE-EeccccccCCHhHHHHhcCCceeEE
Confidence 01123455788899965432 1233455566777777776664433
No 27
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.39 E-value=2.3e-12 Score=126.34 Aligned_cols=98 Identities=19% Similarity=0.241 Sum_probs=81.2
Q ss_pred CCCeEEEECCCCchhHHHhccC-CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecccccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR-NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWT 352 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~ 352 (666)
+..+|||||||+|.++..+ .. +|+++|+++.++..++.+. ....+...+...+++++++||+|++..+++|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~- 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPFPGESFDVVLLFTTLEFV- 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCSCSSCEEEEEEESCTTTC-
T ss_pred CCCeEEEECCCCCHhHHhC-CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCCCCCcEEEEEEcChhhhc-
Confidence 4579999999999999988 56 8999999998876554322 23345556778889888999999999887776
Q ss_pred cChHHHHHHHHHhccCCeEEEEEECC
Q 005981 353 RDDGILLLEVNRMLRAGGYFAWAAQP 378 (666)
Q Consensus 353 ~d~~~~L~el~RvLkPGG~lv~st~P 378 (666)
+++..+++++.++|||||.++++++.
T Consensus 109 ~~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 109 EDVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEecC
Confidence 78899999999999999999999753
No 28
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.39 E-value=1.2e-12 Score=127.66 Aligned_cols=98 Identities=12% Similarity=0.087 Sum_probs=81.6
Q ss_pred CCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecccccccc
Q 005981 275 IRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWT 352 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~ 352 (666)
..+|||||||+|.++..|+.. +|+|+|+++.++..++ ++.....+...++..+++++++||+|+|..+++|+.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~-----~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 116 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELAR-----QTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMG 116 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHH-----HHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCC
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHH-----HhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCC
Confidence 368999999999999999876 8999999998875554 333344566667888888889999999999888874
Q ss_pred -cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 353 -RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 353 -~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.+...+|+++.++|||||.++++.+
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~i~~~ 142 (203)
T 3h2b_A 117 PGELPDALVALRMAVEDGGGLLMSFF 142 (203)
T ss_dssp TTTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 3678999999999999999999974
No 29
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.39 E-value=1.7e-12 Score=134.95 Aligned_cols=111 Identities=14% Similarity=0.188 Sum_probs=86.4
Q ss_pred HHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhc---cC--CeEEEeCCcchHHHHHHHHHHH-c-CCCceEEeeccc
Q 005981 258 YLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLL---PR--NVITMSIAPKDVHENQIQFALE-R-GAPAMVAAFATR 330 (666)
Q Consensus 258 ~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~---~~--~V~gvDiS~~~l~~a~~~~a~~-r-g~~~~~~~~d~e 330 (666)
+.+.+.+... .+..+|||||||+|.++..|+ .. +|+|+|+++.++..++...... . .....+...+++
T Consensus 25 ~~~~l~~~~~-----~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 99 (299)
T 3g5t_A 25 FYKMIDEYHD-----GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSD 99 (299)
T ss_dssp HHHHHHHHCC-----SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT
T ss_pred HHHHHHHHhc-----CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHH
Confidence 3444444433 345899999999999999888 33 8999999999998887544432 1 233456666788
Q ss_pred CCCCCC------CCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEE
Q 005981 331 RLPYPS------QAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWA 375 (666)
Q Consensus 331 ~Lpf~d------~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~s 375 (666)
.+++++ ++||+|+|+.+++|+ +...+++++.|+|||||.+++.
T Consensus 100 ~~~~~~~~~~~~~~fD~V~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 100 DFKFLGADSVDKQKIDMITAVECAHWF--DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp CCGGGCTTTTTSSCEEEEEEESCGGGS--CHHHHHHHHHHHEEEEEEEEEE
T ss_pred hCCccccccccCCCeeEEeHhhHHHHh--CHHHHHHHHHHhcCCCcEEEEE
Confidence 888777 899999999886665 8999999999999999999884
No 30
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.38 E-value=1.2e-12 Score=134.67 Aligned_cols=102 Identities=19% Similarity=0.184 Sum_probs=83.5
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCCC-CCCCCeeEEEecccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLP-YPSQAFDLIHCSRCR 348 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~Lp-f~d~sFDlVv~s~~l 348 (666)
...+|||||||+|.++..+++. +|+|+|+++.++..++... ...++. ..+...+...++ +.+++||+|+|..++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAA-EAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-HhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 3579999999999999999876 8999999999988776433 334442 345556777777 778999999999887
Q ss_pred cccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 349 INWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 349 ~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+|+ +++..+|+++.++|||||.+++...
T Consensus 147 ~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 147 EWV-ADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp GGC-SCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hcc-cCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 777 8889999999999999999999864
No 31
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.38 E-value=2.1e-12 Score=135.29 Aligned_cols=113 Identities=16% Similarity=0.155 Sum_probs=90.3
Q ss_pred HHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCCC
Q 005981 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLP 333 (666)
Q Consensus 259 i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~Lp 333 (666)
.+.+.+.+..+ .+..+|||||||+|.++..++++ +|+|+|+++.++..++.+ +...++. ..+...|...++
T Consensus 105 ~~~l~~~l~~~---~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~ 180 (312)
T 3vc1_A 105 AEFLMDHLGQA---GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRR-ARELRIDDHVRSRVCNMLDTP 180 (312)
T ss_dssp HHHHHTTSCCC---CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEECCTTSCC
T ss_pred HHHHHHHhccC---CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHcCCCCceEEEECChhcCC
Confidence 34455555422 35579999999999999888764 899999999999887644 4445544 456666788899
Q ss_pred CCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 334 YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 334 f~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++++||+|+|..+++|+ +...+|+++.|+|||||.+++.+.
T Consensus 181 ~~~~~fD~V~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 181 FDKGAVTASWNNESTMYV--DLHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp CCTTCEEEEEEESCGGGS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCEeEEEECCchhhC--CHHHHHHHHHHHcCCCcEEEEEEc
Confidence 989999999999887777 488999999999999999999864
No 32
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.38 E-value=8.2e-13 Score=129.97 Aligned_cols=101 Identities=17% Similarity=0.284 Sum_probs=80.6
Q ss_pred CCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecccccc
Q 005981 273 HHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (666)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h 350 (666)
.+..+|||||||+|.++..+++. +|+|+|+++.++..++..... .+ ...+...|+..++ ++++||+|+|+.+++|
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~-~~-~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKR-WS-HISWAATDILQFS-TAELFDLIVVAEVLYY 126 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTT-CS-SEEEEECCTTTCC-CSCCEEEEEEESCGGG
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhccc-CC-CeEEEEcchhhCC-CCCCccEEEEccHHHh
Confidence 34578999999999999999887 899999999988766543222 12 3455566777777 6789999999988777
Q ss_pred cccCh---HHHHHHHHHhccCCeEEEEEEC
Q 005981 351 WTRDD---GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 351 ~~~d~---~~~L~el~RvLkPGG~lv~st~ 377 (666)
+ .++ ..+|.++.++|||||.++++++
T Consensus 127 ~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 127 L-EDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp S-SSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred C-CCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 7 555 4779999999999999999864
No 33
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.38 E-value=1.5e-12 Score=130.79 Aligned_cols=103 Identities=15% Similarity=0.157 Sum_probs=81.4
Q ss_pred CCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h 350 (666)
+..+|||||||+|.++..|++. +|+++|+++.++..++............+...++..+++++++||+|+|..+++|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 4679999999999999988865 8999999999887776443322111234555577888888889999999988777
Q ss_pred cccCh--HHHHHHHHHhccCCeEEEEEEC
Q 005981 351 WTRDD--GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 351 ~~~d~--~~~L~el~RvLkPGG~lv~st~ 377 (666)
+ .+. ..+|+++.++|||||.++++++
T Consensus 159 ~-~~~~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 159 L-TDQHLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp S-CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-CHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 7 553 4899999999999999999864
No 34
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.37 E-value=1.6e-12 Score=132.40 Aligned_cols=98 Identities=19% Similarity=0.346 Sum_probs=82.2
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEeccccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINW 351 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~ 351 (666)
+..+|||||||+|.++..+++. +|+|+|+++.++..++.+ .... +...+...+++++++||+|++..+++|+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~-----~~~~-~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 127 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREK-----GVKN-VVEAKAEDLPFPSGAFEAVLALGDVLSY 127 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHH-----TCSC-EEECCTTSCCSCTTCEEEEEECSSHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhh-----cCCC-EEECcHHHCCCCCCCEEEEEEcchhhhc
Confidence 4479999999999999999876 899999999888665432 2222 5556788889888999999998888898
Q ss_pred ccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 352 TRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 352 ~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
..++..+|+++.++|||||.++++++
T Consensus 128 ~~~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 128 VENKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccHHHHHHHHHHHcCCCeEEEEEeC
Confidence 77889999999999999999999865
No 35
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.37 E-value=7.1e-13 Score=135.20 Aligned_cols=109 Identities=13% Similarity=0.130 Sum_probs=87.4
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY 334 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf 334 (666)
.+.+.+.+.+.. .+..+|||||||+|.++..+++. +|+|+|+++.++..+ +++. ...+...|.+.+++
T Consensus 21 ~~~~~l~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a-----~~~~-~~~~~~~d~~~~~~ 90 (261)
T 3ege_A 21 RIVNAIINLLNL----PKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQA-----VVHP-QVEWFTGYAENLAL 90 (261)
T ss_dssp HHHHHHHHHHCC----CTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSS-----CCCT-TEEEECCCTTSCCS
T ss_pred HHHHHHHHHhCC----CCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHH-----Hhcc-CCEEEECchhhCCC
Confidence 456666666652 34579999999999999999876 899999999766432 2222 44566667888999
Q ss_pred CCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 335 PSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 335 ~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++++||+|+|..+++|+ .+...+++++.|+|| ||++++.+.
T Consensus 91 ~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 91 PDKSVDGVISILAIHHF-SHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp CTTCBSEEEEESCGGGC-SSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred CCCCEeEEEEcchHhhc-cCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 99999999999987787 899999999999999 998888764
No 36
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.37 E-value=2.5e-12 Score=126.92 Aligned_cols=102 Identities=20% Similarity=0.311 Sum_probs=81.4
Q ss_pred CCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecccccccc
Q 005981 275 IRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWT 352 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~ 352 (666)
..+|||+|||+|.++..++.. +|+++|+++.++..++.... ..+....+...|...+++++++||+|+|+.+++++.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~ 117 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAK-SRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFE 117 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCC
T ss_pred CCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHH-hcCCCceEEECchhcCCCCCCcEEEEEEcCchHhCC
Confidence 579999999999999888876 89999999999887765443 334444566667778888888999999987733331
Q ss_pred -cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 353 -RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 353 -~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.+...+++++.++|||||.+++..+
T Consensus 118 ~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 118 PLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 4567899999999999999999864
No 37
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.37 E-value=5.1e-13 Score=136.86 Aligned_cols=103 Identities=17% Similarity=0.096 Sum_probs=79.4
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHH-----------------HcCCCceEEeecccCCCC
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFAL-----------------ERGAPAMVAAFATRRLPY 334 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~-----------------~rg~~~~~~~~d~e~Lpf 334 (666)
...+|||+|||+|..+..|++. +|+|+|+|+.++..++.+... ..+....+...|+..+++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~ 147 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR 147 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc
Confidence 4478999999999999999876 899999999999776533221 012334566667888887
Q ss_pred CC-CCeeEEEecccccccccC-hHHHHHHHHHhccCCeEEEEEE
Q 005981 335 PS-QAFDLIHCSRCRINWTRD-DGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 335 ~d-~sFDlVv~s~~l~h~~~d-~~~~L~el~RvLkPGG~lv~st 376 (666)
.+ ++||+|++..+++++..+ ...+++++.|+|||||.|++.+
T Consensus 148 ~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 148 ANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 64 899999988877776432 3479999999999999997654
No 38
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.37 E-value=3.1e-12 Score=122.93 Aligned_cols=103 Identities=14% Similarity=0.129 Sum_probs=74.5
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCc-eEEeecccCCC-CCCCCeeEEEeccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPA-MVAAFATRRLP-YPSQAFDLIHCSRCRI 349 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~-~~~~~d~e~Lp-f~d~sFDlVv~s~~l~ 349 (666)
++.+|||+|||+|.++..|++. +|+|+|+++.++..++.+.. ..++.. .+...+.+.++ +.+++||+|+++...+
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~-~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLS-DLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHH-HHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHH-HcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 4579999999999999999876 89999999999988875444 344432 33344455543 4478899998763322
Q ss_pred cc--------ccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 350 NW--------TRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 350 h~--------~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+. ..+...+++++.|+|||||.+++...
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 21 12234788999999999999999864
No 39
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.37 E-value=3.2e-12 Score=123.35 Aligned_cols=100 Identities=16% Similarity=0.203 Sum_probs=80.8
Q ss_pred CCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCC-CceEEeecccCCCCCCCCeeEEEeccccccc
Q 005981 275 IRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA-PAMVAAFATRRLPYPSQAFDLIHCSRCRINW 351 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~-~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~ 351 (666)
..+|||+|||+|.++..+++. +|+++|+++.++..++.... ..+. ...+...|...+++ +++||+|+++.+++|+
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~ 110 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKS-IENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMFL 110 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGGS
T ss_pred CCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHH-hCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhhC
Confidence 469999999999999988866 89999999999888775443 3444 34455567777887 7899999999887776
Q ss_pred cc-ChHHHHHHHHHhccCCeEEEEEE
Q 005981 352 TR-DDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 352 ~~-d~~~~L~el~RvLkPGG~lv~st 376 (666)
.. +...+++++.++|||||.+++.+
T Consensus 111 ~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 111 EAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 32 56799999999999999988765
No 40
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.37 E-value=2e-12 Score=127.68 Aligned_cols=116 Identities=9% Similarity=0.109 Sum_probs=86.8
Q ss_pred HHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCC------CceE
Q 005981 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGA------PAMV 324 (666)
Q Consensus 255 ~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~------~~~~ 324 (666)
.....+.+.+.+.. .+..+|||||||+|.++..+++. +|+|+|+++.++..++.+... .++ ...+
T Consensus 14 ~~~~~~~l~~~l~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~~~v~~ 88 (219)
T 3jwg_A 14 NQQRLGTVVAVLKS----VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKI-DRLPEMQRKRISL 88 (219)
T ss_dssp HHHHHHHHHHHHHH----TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTG-GGSCHHHHTTEEE
T ss_pred hHHHHHHHHHHHhh----cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHh-hccccccCcceEE
Confidence 34445555555542 24579999999999999999864 899999999998877654332 222 2345
Q ss_pred EeecccCCCCCCCCeeEEEecccccccccCh--HHHHHHHHHhccCCeEEEEEE
Q 005981 325 AAFATRRLPYPSQAFDLIHCSRCRINWTRDD--GILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 325 ~~~d~e~Lpf~d~sFDlVv~s~~l~h~~~d~--~~~L~el~RvLkPGG~lv~st 376 (666)
...|+..+++++++||+|+|+.+++|+ .+. ..+++++.++|||||.++.+.
T Consensus 89 ~~~d~~~~~~~~~~fD~V~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 89 FQSSLVYRDKRFSGYDAATVIEVIEHL-DENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp EECCSSSCCGGGTTCSEEEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EeCcccccccccCCCCEEEEHHHHHhC-CHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 555677777777899999999998887 544 589999999999999776653
No 41
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.37 E-value=2.7e-12 Score=125.93 Aligned_cols=96 Identities=20% Similarity=0.310 Sum_probs=78.1
Q ss_pred CCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecccccccc
Q 005981 275 IRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWT 352 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~ 352 (666)
..+|||||||+|.++..+++. +|+|+|+++.++..++.+. ++ .+...+...++ .+++||+|+|+.+++|+.
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~----~~--~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~ 116 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL----GR--PVRTMLFHQLD-AIDAYDAVWAHACLLHVP 116 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----TS--CCEECCGGGCC-CCSCEEEEEECSCGGGSC
T ss_pred CCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc----CC--ceEEeeeccCC-CCCcEEEEEecCchhhcC
Confidence 479999999999999999876 8999999998887665433 22 23344667777 779999999999888873
Q ss_pred -cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 353 -RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 353 -~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++...+|+++.++|||||+++++..
T Consensus 117 ~~~~~~~l~~~~~~LkpgG~l~~~~~ 142 (211)
T 3e23_A 117 RDELADVLKLIWRALKPGGLFYASYK 142 (211)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 2566999999999999999999965
No 42
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.37 E-value=1.9e-12 Score=126.28 Aligned_cols=103 Identities=14% Similarity=0.177 Sum_probs=80.8
Q ss_pred CCCeEEEECCCCchhH-HHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecccccc
Q 005981 274 HIRVVMDAGCGVASFG-AYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a-~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h 350 (666)
+..+|||+|||+|.++ ..+... +|+|+|+++.++..++..... .+....+...++..+++++++||+|+|..+++|
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 101 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRE-NNFKLNISKGDIRKLPFKDESMSFVYSYGTIFH 101 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHH-HTCCCCEEECCTTSCCSCTTCEEEEEECSCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHh-cCCceEEEECchhhCCCCCCceeEEEEcChHHh
Confidence 3479999999999874 344333 899999999999887654433 344444566678888888899999999888777
Q ss_pred cc-cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 351 WT-RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 351 ~~-~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+. .+...+++++.++|||||.++++++
T Consensus 102 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 102 MRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 73 4566999999999999999999864
No 43
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.37 E-value=9.4e-13 Score=136.62 Aligned_cols=103 Identities=10% Similarity=0.024 Sum_probs=75.1
Q ss_pred CCCeEEEECCCCchhHHH----hcc----CC--eEEEeCCcchHHHHHHHHHHHcCCCce---EEeecccCCC------C
Q 005981 274 HIRVVMDAGCGVASFGAY----LLP----RN--VITMSIAPKDVHENQIQFALERGAPAM---VAAFATRRLP------Y 334 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~----L~~----~~--V~gvDiS~~~l~~a~~~~a~~rg~~~~---~~~~d~e~Lp------f 334 (666)
+..+|||||||+|.++.. +.. .. ++++|+|+.|+..++.+.+...++... +...+.+.++ +
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 456899999999976543 222 23 399999999998877554433344332 2222333333 5
Q ss_pred CCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 335 PSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 335 ~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++++||+|+|+.+++|+ +|+..+|++++|+|||||.+++...
T Consensus 132 ~~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYV-KDIPATLKFFHSLLGTNAKMLIIVV 173 (292)
T ss_dssp CCCCEEEEEEESCGGGC-SCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCceeEEEEeeeeeec-CCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 68899999999886666 8999999999999999999999854
No 44
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.36 E-value=8.7e-13 Score=136.05 Aligned_cols=117 Identities=17% Similarity=0.248 Sum_probs=88.2
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcC----CCceEEeecc
Q 005981 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERG----APAMVAAFAT 329 (666)
Q Consensus 256 ~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg----~~~~~~~~d~ 329 (666)
..+.+.+.+.+.. ....+|||||||+|.++..|++. +|+|+|+|+.++..++.+...... ....+...+.
T Consensus 43 ~~~~~~l~~~l~~----~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~ 118 (293)
T 3thr_A 43 AEYKAWLLGLLRQ----HGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANW 118 (293)
T ss_dssp HHHHHHHHHHHHH----TTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCG
T ss_pred HHHHHHHHHHhcc----cCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecCh
Confidence 3445555555542 23478999999999999999877 899999999999877654322211 1223445566
Q ss_pred cCCC---CCCCCeeEEEec-ccccccccC-------hHHHHHHHHHhccCCeEEEEEEC
Q 005981 330 RRLP---YPSQAFDLIHCS-RCRINWTRD-------DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 330 e~Lp---f~d~sFDlVv~s-~~l~h~~~d-------~~~~L~el~RvLkPGG~lv~st~ 377 (666)
..++ +++++||+|+|. .+++|+ .+ ...+|+++.++|||||+++++.+
T Consensus 119 ~~~~~~~~~~~~fD~V~~~g~~l~~~-~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 119 LTLDKDVPAGDGFDAVICLGNSFAHL-PDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp GGHHHHSCCTTCEEEEEECTTCGGGS-CCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhCccccccCCCeEEEEEcChHHhhc-CccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 6666 788999999998 777777 66 77999999999999999999864
No 45
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.36 E-value=1.7e-12 Score=128.14 Aligned_cols=115 Identities=11% Similarity=0.091 Sum_probs=86.0
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCC------CceEE
Q 005981 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGA------PAMVA 325 (666)
Q Consensus 256 ~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~------~~~~~ 325 (666)
....+.+.+.+.. .+..+|||||||+|.++..+++. +|+|+|+++.++..++.+. ...++ ...+.
T Consensus 15 ~~~~~~l~~~l~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~~~~~v~~~ 89 (217)
T 3jwh_A 15 QQRMNGVVAALKQ----SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERL-DRLRLPRNQWERLQLI 89 (217)
T ss_dssp HHHHHHHHHHHHH----TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHH-TTCCCCHHHHTTEEEE
T ss_pred HHHHHHHHHHHHh----cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHH-HHhcCCcccCcceEEE
Confidence 3445556555542 24579999999999999998864 8999999999988776443 22333 23455
Q ss_pred eecccCCCCCCCCeeEEEecccccccccCh--HHHHHHHHHhccCCeEEEEEE
Q 005981 326 AFATRRLPYPSQAFDLIHCSRCRINWTRDD--GILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 326 ~~d~e~Lpf~d~sFDlVv~s~~l~h~~~d~--~~~L~el~RvLkPGG~lv~st 376 (666)
..++..+++++++||+|+|+.+++|+ .+. ..+++++.++|||||.++++.
T Consensus 90 ~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 90 QGALTYQDKRFHGYDAATVIEVIEHL-DLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp ECCTTSCCGGGCSCSEEEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred eCCcccccccCCCcCEEeeHHHHHcC-CHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 55666666667899999999998777 544 699999999999999777664
No 46
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.36 E-value=4e-12 Score=130.58 Aligned_cols=109 Identities=12% Similarity=0.152 Sum_probs=83.8
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEeccccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINW 351 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~ 351 (666)
+..+|||||||+|.++..+++. +|+|+|+++.++..++.. .....+...+++.+++ +++||+|+|+.+++|+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~ 130 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQN-----YPHLHFDVADARNFRV-DKPLDAVFSNAMLHWV 130 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----CTTSCEEECCTTTCCC-SSCEEEEEEESCGGGC
T ss_pred CCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhh-----CCCCEEEECChhhCCc-CCCcCEEEEcchhhhC
Confidence 4579999999999999888765 899999999888665432 2233455567788887 5899999998885555
Q ss_pred ccChHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHH
Q 005981 352 TRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHW 390 (666)
Q Consensus 352 ~~d~~~~L~el~RvLkPGG~lv~st~P~~~~~~el~~~w 390 (666)
.++..+|+++.|+|||||++++... .......+...+
T Consensus 131 -~d~~~~l~~~~~~LkpgG~l~~~~~-~~~~~~~~~~~~ 167 (279)
T 3ccf_A 131 -KEPEAAIASIHQALKSGGRFVAEFG-GKGNIKYILEAL 167 (279)
T ss_dssp -SCHHHHHHHHHHHEEEEEEEEEEEE-CTTTTHHHHHHH
T ss_pred -cCHHHHHHHHHHhcCCCcEEEEEec-CCcchHHHHHHH
Confidence 8899999999999999999999864 333333444433
No 47
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.35 E-value=3.7e-12 Score=132.53 Aligned_cols=115 Identities=13% Similarity=0.112 Sum_probs=87.9
Q ss_pred cHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeec
Q 005981 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFA 328 (666)
Q Consensus 254 g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d 328 (666)
.....++.+.+.+.. .++.+|||||||+|.++..+++. +|+|+|+++.++..++.. +...++. ..+...|
T Consensus 56 a~~~~~~~~~~~~~~----~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d 130 (302)
T 3hem_A 56 AQYAKRKLALDKLNL----EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAM-FDEVDSPRRKEVRIQG 130 (302)
T ss_dssp HHHHHHHHHHHTTCC----CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHH-HHHSCCSSCEEEEECC
T ss_pred HHHHHHHHHHHHcCC----CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHH-HHhcCCCCceEEEECC
Confidence 334456666666642 35579999999999999888765 899999999999887754 4445554 3445556
Q ss_pred ccCCCCCCCCeeEEEecccccccccCh---------HHHHHHHHHhccCCeEEEEEEC
Q 005981 329 TRRLPYPSQAFDLIHCSRCRINWTRDD---------GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 329 ~e~Lpf~d~sFDlVv~s~~l~h~~~d~---------~~~L~el~RvLkPGG~lv~st~ 377 (666)
...+ +++||+|++..+++|+ .++ ..+++++.++|||||.+++.+.
T Consensus 131 ~~~~---~~~fD~v~~~~~~~~~-~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 131 WEEF---DEPVDRIVSLGAFEHF-ADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp GGGC---CCCCSEEEEESCGGGT-TCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred HHHc---CCCccEEEEcchHHhc-CccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 6655 6899999999987777 443 6899999999999999999875
No 48
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.35 E-value=6.8e-13 Score=134.05 Aligned_cols=113 Identities=14% Similarity=0.137 Sum_probs=81.9
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccC-
Q 005981 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR- 331 (666)
Q Consensus 256 ~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~- 331 (666)
..+.+.+.+.+. ..+.+|||||||+|..+.++++. +|+++|+++.++..++. .+...+....+...+.+.
T Consensus 47 ~~~m~~~a~~~~-----~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~-~~~~~~~~~~~~~~~a~~~ 120 (236)
T 3orh_A 47 TPYMHALAAAAS-----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRD-WAPRQTHKVIPLKGLWEDV 120 (236)
T ss_dssp HHHHHHHHHHHT-----TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHH-HGGGCSSEEEEEESCHHHH
T ss_pred HHHHHHHHHhhc-----cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHH-HHhhCCCceEEEeehHHhh
Confidence 345556666554 35579999999999999999876 79999999998877764 344444444444444333
Q ss_pred -CCCCCCCeeEEEe-----cccccccccChHHHHHHHHHhccCCeEEEEE
Q 005981 332 -LPYPSQAFDLIHC-----SRCRINWTRDDGILLLEVNRMLRAGGYFAWA 375 (666)
Q Consensus 332 -Lpf~d~sFDlVv~-----s~~l~h~~~d~~~~L~el~RvLkPGG~lv~s 375 (666)
.++++++||.|++ .....|+ .+...++.++.|+|||||.|++.
T Consensus 121 ~~~~~~~~FD~i~~D~~~~~~~~~~~-~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 121 APTLPDGHFDGILYDTYPLSEETWHT-HQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp GGGSCTTCEEEEEECCCCCBGGGTTT-HHHHHHHHTHHHHEEEEEEEEEC
T ss_pred cccccccCCceEEEeeeecccchhhh-cchhhhhhhhhheeCCCCEEEEE
Confidence 2477899999974 2233344 56779999999999999999875
No 49
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.34 E-value=3.9e-12 Score=130.95 Aligned_cols=116 Identities=13% Similarity=0.122 Sum_probs=87.4
Q ss_pred cHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCC--CceEEeec
Q 005981 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA--PAMVAAFA 328 (666)
Q Consensus 254 g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~--~~~~~~~d 328 (666)
.....++.+.+.+.. .+..+|||||||+|.++..+++. +|+|+|+++.++..++... ...+. ...+...|
T Consensus 48 a~~~~~~~~~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~-~~~~~~~~~~~~~~d 122 (287)
T 1kpg_A 48 AQIAKIDLALGKLGL----QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLV-ANSENLRSKRVLLAG 122 (287)
T ss_dssp HHHHHHHHHHTTTTC----CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HTCCCCSCEEEEESC
T ss_pred HHHHHHHHHHHHcCC----CCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHH-HhcCCCCCeEEEECC
Confidence 333455666666542 34579999999999999888743 8999999999887776433 33343 23444556
Q ss_pred ccCCCCCCCCeeEEEecccccccc-cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 329 TRRLPYPSQAFDLIHCSRCRINWT-RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 329 ~e~Lpf~d~sFDlVv~s~~l~h~~-~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
...++ ++||+|+|..+++|+. .+...+|+++.|+|||||.+++.++
T Consensus 123 ~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 123 WEQFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp GGGCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred hhhCC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 66665 7899999999988885 4677999999999999999999864
No 50
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.34 E-value=2.6e-12 Score=125.77 Aligned_cols=110 Identities=12% Similarity=0.096 Sum_probs=84.3
Q ss_pred HHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCC-CceEEeecccCCCCC
Q 005981 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA-PAMVAAFATRRLPYP 335 (666)
Q Consensus 259 i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~-~~~~~~~d~e~Lpf~ 335 (666)
...+.+.+..+ ....+|||||||+|.++..+++. +|+|+|+++.++..++. .+. ...+...|...+ ++
T Consensus 34 ~~~~~~~l~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~-----~~~~~~~~~~~d~~~~-~~ 104 (218)
T 3ou2_A 34 APAALERLRAG---NIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR-----HGLDNVEFRQQDLFDW-TP 104 (218)
T ss_dssp HHHHHHHHTTT---TSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG-----GCCTTEEEEECCTTSC-CC
T ss_pred HHHHHHHHhcC---CCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh-----cCCCCeEEEecccccC-CC
Confidence 34455555432 34469999999999999888765 89999999987755542 443 334555667777 77
Q ss_pred CCCeeEEEecccccccccCh--HHHHHHHHHhccCCeEEEEEECC
Q 005981 336 SQAFDLIHCSRCRINWTRDD--GILLLEVNRMLRAGGYFAWAAQP 378 (666)
Q Consensus 336 d~sFDlVv~s~~l~h~~~d~--~~~L~el~RvLkPGG~lv~st~P 378 (666)
+++||+|+|+.+++|+ ++. ..+|+++.++|||||.+++++..
T Consensus 105 ~~~~D~v~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 105 DRQWDAVFFAHWLAHV-PDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp SSCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCceeEEEEechhhcC-CHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 8999999999987777 554 68999999999999999999753
No 51
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.34 E-value=4.9e-12 Score=126.01 Aligned_cols=119 Identities=20% Similarity=0.323 Sum_probs=90.3
Q ss_pred HHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCC
Q 005981 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL 332 (666)
Q Consensus 255 ~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~L 332 (666)
...+.+.+.+.+... ..+..+|||||||+|.++..+++. +|+++|+++.++..++.... ..+....+...++..+
T Consensus 20 ~~~~~~~~~~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~-~~~~~~~~~~~d~~~~ 96 (246)
T 1y8c_A 20 YKKWSDFIIEKCVEN--NLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFR-SQGLKPRLACQDISNL 96 (246)
T ss_dssp HHHHHHHHHHHHHTT--TCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHH-HTTCCCEEECCCGGGC
T ss_pred HHHHHHHHHHHHHHh--CCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHh-hcCCCeEEEecccccC
Confidence 344555555555432 124579999999999999998876 89999999999988775443 3444445566677888
Q ss_pred CCCCCCeeEEEecc-cccccc--cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 333 PYPSQAFDLIHCSR-CRINWT--RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 333 pf~d~sFDlVv~s~-~l~h~~--~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++ ++||+|+|+. +++|+. .+...+|+++.++|||||.++++.+
T Consensus 97 ~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 97 NIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp CCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred Ccc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 877 8999999987 777763 3456899999999999999999764
No 52
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.33 E-value=4.4e-12 Score=128.86 Aligned_cols=97 Identities=12% Similarity=0.147 Sum_probs=77.8
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecc-cccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSR-CRIN 350 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~-~l~h 350 (666)
...+|||||||+|.++..|++. +|+|+|+++.++..++. +.....+...|+..+++ +++||+|+|+. +++|
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~-----~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~ 123 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARR-----RNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGH 123 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHH-----HCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGG
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHh-----hCCCCEEEECChHHCCc-cCCcCEEEEcCchhhh
Confidence 3479999999999999999887 89999999988765543 22234566667888887 68999999987 7666
Q ss_pred cc--cChHHHHHHHHHhccCCeEEEEEE
Q 005981 351 WT--RDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 351 ~~--~d~~~~L~el~RvLkPGG~lv~st 376 (666)
+. .+...+|+++.++|||||.+++..
T Consensus 124 ~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 124 LAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp SCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 63 245688999999999999999974
No 53
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.33 E-value=1.1e-12 Score=131.65 Aligned_cols=114 Identities=13% Similarity=0.134 Sum_probs=82.3
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCC
Q 005981 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL 332 (666)
Q Consensus 256 ~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~L 332 (666)
..+++.+.+.+. .+..+|||||||+|.++..+++. +|+|+|+++.++..++. .+...+....+...+.+.+
T Consensus 47 ~~~~~~l~~~~~-----~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~v~~~~~d~~~~ 120 (236)
T 1zx0_A 47 TPYMHALAAAAS-----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRD-WAPRQTHKVIPLKGLWEDV 120 (236)
T ss_dssp HHHHHHHHHHHT-----TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHH-HGGGCSSEEEEEESCHHHH
T ss_pred HHHHHHHHhhcC-----CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHH-HHHhcCCCeEEEecCHHHh
Confidence 345555555443 34578999999999999999774 79999999999887764 3333343344555666777
Q ss_pred --CCCCCCeeEEEe-cccccccc----cChHHHHHHHHHhccCCeEEEEEE
Q 005981 333 --PYPSQAFDLIHC-SRCRINWT----RDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 333 --pf~d~sFDlVv~-s~~l~h~~----~d~~~~L~el~RvLkPGG~lv~st 376 (666)
++++++||+|++ ...+ +.. .+...+++++.|+|||||+|++..
T Consensus 121 ~~~~~~~~fD~V~~d~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 121 APTLPDGHFDGILYDTYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp GGGSCTTCEEEEEECCCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred hcccCCCceEEEEECCccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 788899999998 4432 221 123377999999999999998874
No 54
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.33 E-value=3.8e-12 Score=123.91 Aligned_cols=98 Identities=13% Similarity=0.116 Sum_probs=79.4
Q ss_pred eEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecccccccc-c
Q 005981 277 VVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWT-R 353 (666)
Q Consensus 277 ~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~-~ 353 (666)
+|||||||+|.++..+++. +|+++|+++.++..++.... ..+....+...++..+++++++||+|+|+. .|+. .
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~~~~ 108 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQ-EKGVKITTVQSNLADFDIVADAWEGIVSIF--CHLPSS 108 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHH-HHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCCCHH
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHH-hcCCceEEEEcChhhcCCCcCCccEEEEEh--hcCCHH
Confidence 8999999999999998876 89999999999887765443 334455556667788888889999999853 4442 4
Q ss_pred ChHHHHHHHHHhccCCeEEEEEEC
Q 005981 354 DDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 354 d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+...++.++.++|||||.+++.++
T Consensus 109 ~~~~~l~~~~~~L~pgG~l~~~~~ 132 (202)
T 2kw5_A 109 LRQQLYPKVYQGLKPGGVFILEGF 132 (202)
T ss_dssp HHHHHHHHHHTTCCSSEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEe
Confidence 567999999999999999999975
No 55
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.32 E-value=3.4e-12 Score=127.31 Aligned_cols=100 Identities=20% Similarity=0.267 Sum_probs=80.1
Q ss_pred CCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h 350 (666)
+..+|||||||+|.++..+++. +|+++|+++.++..++..... ....+...+...+++++++||+|++..+++|
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLHLPQDSFDLAYSSLALHY 119 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCCCCTTCEEEEEEESCGGG
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhccCCCCCceEEEEeccccc
Confidence 4579999999999999888765 799999999877555422111 1234555677788888899999999988777
Q ss_pred cccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 351 WTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 351 ~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+ ++...+|+++.++|||||.++++++
T Consensus 120 ~-~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 120 V-EDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp C-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c-chHHHHHHHHHHhcCcCcEEEEEeC
Confidence 6 7889999999999999999999864
No 56
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.32 E-value=5e-12 Score=131.32 Aligned_cols=114 Identities=15% Similarity=0.140 Sum_probs=86.8
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcC----CCceEEeeccc
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERG----APAMVAAFATR 330 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg----~~~~~~~~d~e 330 (666)
.....+.+.+. ....+|||||||+|.++..|++. +|+|+|+++.++..++.+.. ..+ ....+...|+.
T Consensus 70 ~~~~~~~~~~~-----~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 70 SEAREFATRTG-----PVSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLA-EAPADVRDRCTLVQGDMS 143 (299)
T ss_dssp HHHHHHHHHHC-----CCCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHH-TSCHHHHTTEEEEECBTT
T ss_pred HHHHHHHHhhC-----CCCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHh-hcccccccceEEEeCchh
Confidence 34555555554 22348999999999999999877 89999999999987764433 333 23456666788
Q ss_pred CCCCCCCCeeEEEecccccccccC--hHHHHHHHHHhccCCeEEEEEEC
Q 005981 331 RLPYPSQAFDLIHCSRCRINWTRD--DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 331 ~Lpf~d~sFDlVv~s~~l~h~~~d--~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.+++ +++||+|+|+...+|+.+. ...+|+++.++|||||.|++.++
T Consensus 144 ~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 144 AFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp BCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEee
Confidence 8887 6899999987666666442 46999999999999999999964
No 57
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.31 E-value=4.6e-12 Score=119.94 Aligned_cols=95 Identities=20% Similarity=0.284 Sum_probs=77.8
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEeccccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINW 351 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~ 351 (666)
+..+|||+|||+|.++..+++. +|+++|+++.++..++.. .....+...+ +++++++||+|+++.+++|+
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~ 88 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK-----FDSVITLSDP---KEIPDNSVDFILFANSFHDM 88 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH-----CTTSEEESSG---GGSCTTCEEEEEEESCSTTC
T ss_pred CCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC---CCCCCCceEEEEEccchhcc
Confidence 3468999999999999999887 899999999877655433 2233344433 77888999999999987777
Q ss_pred ccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 352 TRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 352 ~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++...+++++.|+|||||.+++.+.
T Consensus 89 -~~~~~~l~~~~~~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 89 -DDKQHVISEVKRILKDDGRVIIIDW 113 (170)
T ss_dssp -SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -cCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 7889999999999999999999864
No 58
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.30 E-value=2e-12 Score=132.47 Aligned_cols=104 Identities=13% Similarity=0.098 Sum_probs=75.0
Q ss_pred CCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCC-----------------------------C
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA-----------------------------P 321 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~-----------------------------~ 321 (666)
++.+|||||||+|.++..++.. +|+|+|+|+.|+..++.......+. .
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA 134 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh
Confidence 4578999999999887766544 6999999999998876432211000 0
Q ss_pred c-eEEeecccC-CCC---CCCCeeEEEeccccccccc---ChHHHHHHHHHhccCCeEEEEEEC
Q 005981 322 A-MVAAFATRR-LPY---PSQAFDLIHCSRCRINWTR---DDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 322 ~-~~~~~d~e~-Lpf---~d~sFDlVv~s~~l~h~~~---d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
. .+...|+.. .|+ ..++||+|+|+.+++|... +...++++++|+|||||+|++++.
T Consensus 135 i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 135 VKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 0 134445544 343 2579999999999877643 345899999999999999999963
No 59
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.30 E-value=6.1e-12 Score=121.76 Aligned_cols=124 Identities=15% Similarity=0.079 Sum_probs=86.6
Q ss_pred cccHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCC-CceEEee
Q 005981 252 IHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA-PAMVAAF 327 (666)
Q Consensus 252 ~~g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~-~~~~~~~ 327 (666)
....+...+.+.+.+.... ..+..+|||+|||+|.++..++.. +|+++|+++.++..++.+.. ..++ ...+...
T Consensus 23 rp~~~~~~~~l~~~l~~~~-~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~~ 100 (189)
T 3p9n_A 23 RPTTDRVRESLFNIVTARR-DLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIE-ALGLSGATLRRG 100 (189)
T ss_dssp ---CHHHHHHHHHHHHHHS-CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHH-HHTCSCEEEEES
T ss_pred ccCcHHHHHHHHHHHHhcc-CCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHH-HcCCCceEEEEc
Confidence 3344555666666654321 124579999999999998876654 69999999999988875444 3444 2345555
Q ss_pred cccCCC--CCCCCeeEEEecccccccccChHHHHHHHHH--hccCCeEEEEEEC
Q 005981 328 ATRRLP--YPSQAFDLIHCSRCRINWTRDDGILLLEVNR--MLRAGGYFAWAAQ 377 (666)
Q Consensus 328 d~e~Lp--f~d~sFDlVv~s~~l~h~~~d~~~~L~el~R--vLkPGG~lv~st~ 377 (666)
|+..++ +++++||+|+++..+++...+...++.++.+ +|+|||.+++...
T Consensus 101 d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 101 AVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp CHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred cHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 555443 4468999999876644433567789999999 9999999999864
No 60
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.28 E-value=1.1e-11 Score=123.89 Aligned_cols=102 Identities=13% Similarity=0.088 Sum_probs=79.1
Q ss_pred CeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcC-CCceEEeecccCCCCCCCCeeEEEecccccccc
Q 005981 276 RVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERG-APAMVAAFATRRLPYPSQAFDLIHCSRCRINWT 352 (666)
Q Consensus 276 ~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg-~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~ 352 (666)
.+|||||||+|.++..|+.. +|+|+|+++.++..++........ ....+...|+..++ ++++||+|+|+.+++++.
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~ 146 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAIE 146 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTTSC
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhcCC
Confidence 58999999999999999877 899999999988777644332111 12345555677766 456999999998877773
Q ss_pred c-ChHHHHHHHHHhccCCeEEEEEECC
Q 005981 353 R-DDGILLLEVNRMLRAGGYFAWAAQP 378 (666)
Q Consensus 353 ~-d~~~~L~el~RvLkPGG~lv~st~P 378 (666)
. +...+++++.++|||||++++...+
T Consensus 147 ~~~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 147 PEMRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp GGGHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHCCCCcEEEEEEec
Confidence 2 5679999999999999999998653
No 61
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.28 E-value=4.8e-12 Score=132.98 Aligned_cols=103 Identities=8% Similarity=0.038 Sum_probs=73.3
Q ss_pred CCCeEEEECCCCchhHHHhc-cC--CeEEEeCCcchHHHHHHHHHHHcCCC-------ceEEeecc------cCC--CCC
Q 005981 274 HIRVVMDAGCGVASFGAYLL-PR--NVITMSIAPKDVHENQIQFALERGAP-------AMVAAFAT------RRL--PYP 335 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~-~~--~V~gvDiS~~~l~~a~~~~a~~rg~~-------~~~~~~d~------e~L--pf~ 335 (666)
.+.+|||||||+|..+..++ .. +|+|+|+|+.|+..|+.+... .+.. ..+...++ +.+ +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~-~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNK-LNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH-HCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHh-ccccccccccccchhhhhcccchhhhhhhcccc
Confidence 35789999999997554443 32 799999999999988764433 3321 12323333 222 356
Q ss_pred CCCeeEEEecccccccc--cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 336 SQAFDLIHCSRCRINWT--RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 336 d~sFDlVv~s~~l~h~~--~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++||+|+|..++++.. .+...+|+++.|+|||||+|+++++
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 78999999988754432 3457999999999999999999975
No 62
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.28 E-value=9.1e-12 Score=121.46 Aligned_cols=102 Identities=23% Similarity=0.278 Sum_probs=79.6
Q ss_pred CCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h 350 (666)
+..+|||+|||+|.++..+++. +|+++|+++.++..++..... .....+...+...+++++++||+|+++.++.+
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 3478999999999999888765 799999999988766543321 12334555677788888899999998877655
Q ss_pred cc--------------cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 351 WT--------------RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 351 ~~--------------~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+. .+...+++++.++|||||.+++.++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 42 2446899999999999999999975
No 63
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.28 E-value=1.5e-11 Score=128.80 Aligned_cols=115 Identities=12% Similarity=0.101 Sum_probs=87.1
Q ss_pred HHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecc
Q 005981 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFAT 329 (666)
Q Consensus 255 ~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~ 329 (666)
....++.+.+.+.. .+..+|||||||+|.++..+++. +|+|+|+++.++..++... ...++. ..+...|.
T Consensus 75 ~~~~~~~~~~~~~~----~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~ 149 (318)
T 2fk8_A 75 QYAKVDLNLDKLDL----KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVL-ASIDTNRSRQVLLQGW 149 (318)
T ss_dssp HHHHHHHHHTTSCC----CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HTSCCSSCEEEEESCG
T ss_pred HHHHHHHHHHhcCC----CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-HhcCCCCceEEEECCh
Confidence 34455666665542 34579999999999999888754 8999999999987776433 334443 34445566
Q ss_pred cCCCCCCCCeeEEEecccccccc-cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 330 RRLPYPSQAFDLIHCSRCRINWT-RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 330 e~Lpf~d~sFDlVv~s~~l~h~~-~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
..++ ++||+|++..+++|+. .+...+++++.++|||||.+++.++
T Consensus 150 ~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 150 EDFA---EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp GGCC---CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred HHCC---CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 6664 7899999999877775 4667999999999999999999875
No 64
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.28 E-value=1.4e-11 Score=126.93 Aligned_cols=100 Identities=16% Similarity=0.182 Sum_probs=81.4
Q ss_pred CCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecccccccc
Q 005981 275 IRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWT 352 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~ 352 (666)
..+|||+|||+|.++..|++. +|+|+|+++.++..++.. +...+....+...|+..+++ +++||+|+|+.+++|+.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~ 198 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNET-KEKENLNISTALYDINAANI-QENYDFIVSTVVFMFLN 198 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGSC
T ss_pred CCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHH-HHHcCCceEEEEeccccccc-cCCccEEEEccchhhCC
Confidence 478999999999999999876 899999999999887644 44455555666667777776 78999999998877763
Q ss_pred c-ChHHHHHHHHHhccCCeEEEEEE
Q 005981 353 R-DDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 353 ~-d~~~~L~el~RvLkPGG~lv~st 376 (666)
. +...+++++.++|||||.+++..
T Consensus 199 ~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 199 RERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp GGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2 24589999999999999988764
No 65
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.27 E-value=2.7e-11 Score=119.93 Aligned_cols=94 Identities=21% Similarity=0.272 Sum_probs=78.3
Q ss_pred CCeEEEECCCCchhHHHhccCCeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecccccccccC
Q 005981 275 IRVVMDAGCGVASFGAYLLPRNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWTRD 354 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~~d 354 (666)
..+|||||||+|.++..++.. +++|+++.++..++ +++ ..+...+...+++++++||+|++..+++|+ ++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~--~~vD~s~~~~~~a~-----~~~--~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK--IGVEPSERMAEIAR-----KRG--VFVLKGTAENLPLKDESFDFALMVTTICFV-DD 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC--EEEESCHHHHHHHH-----HTT--CEEEECBTTBCCSCTTCEEEEEEESCGGGS-SC
T ss_pred CCcEEEeCCCCCHHHHHHHHH--hccCCCHHHHHHHH-----hcC--CEEEEcccccCCCCCCCeeEEEEcchHhhc-cC
Confidence 468999999999999999877 99999998775544 332 334555678888888899999999887776 88
Q ss_pred hHHHHHHHHHhccCCeEEEEEECC
Q 005981 355 DGILLLEVNRMLRAGGYFAWAAQP 378 (666)
Q Consensus 355 ~~~~L~el~RvLkPGG~lv~st~P 378 (666)
+..+|+++.++|+|||.++++.+.
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeC
Confidence 899999999999999999999753
No 66
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.27 E-value=2.7e-11 Score=120.76 Aligned_cols=115 Identities=17% Similarity=0.189 Sum_probs=87.4
Q ss_pred HHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC-CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCC
Q 005981 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP 333 (666)
Q Consensus 255 ~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~-~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lp 333 (666)
...+.+.+.+.+. ...+|||+|||+|.++..+++. +|+++|+++.++..++.... ..+....+...++..++
T Consensus 20 ~~~~~~~~~~~~~------~~~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~d~~~~~ 92 (243)
T 3d2l_A 20 YPEWVAWVLEQVE------PGKRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEKAM-ETNRHVDFWVQDMRELE 92 (243)
T ss_dssp HHHHHHHHHHHSC------TTCEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHHHH-HTTCCCEEEECCGGGCC
T ss_pred HHHHHHHHHHHcC------CCCeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHhhh-hcCCceEEEEcChhhcC
Confidence 3455666666654 2378999999999999999876 89999999999988775443 33444455666777777
Q ss_pred CCCCCeeEEEecc-cccccc--cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 334 YPSQAFDLIHCSR-CRINWT--RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 334 f~d~sFDlVv~s~-~l~h~~--~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++ ++||+|+|.. +++|+. .+...+++++.++|||||.+++..+
T Consensus 93 ~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 93 LP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp CS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 76 8999999876 655552 3345899999999999999999764
No 67
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.27 E-value=2.3e-11 Score=116.23 Aligned_cols=115 Identities=12% Similarity=0.068 Sum_probs=85.0
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCC---ceEEeecccC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP---AMVAAFATRR 331 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~---~~~~~~d~e~ 331 (666)
...+.+.+.+.. .+..+|||+|||+|.++..++.. +|+++|+++.++..++.... ..+.. ..+...+...
T Consensus 39 ~~~~~l~~~~~~----~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~-~~~~~~~~~~~~~~d~~~ 113 (194)
T 1dus_A 39 KGTKILVENVVV----DKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIK-LNNLDNYDIRVVHSDLYE 113 (194)
T ss_dssp HHHHHHHHHCCC----CTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHH-HTTCTTSCEEEEECSTTT
T ss_pred hHHHHHHHHccc----CCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHH-HcCCCccceEEEECchhc
Confidence 345566666642 34579999999999999888865 89999999999887765443 34444 3444445444
Q ss_pred CCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 332 LPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 332 Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++++++||+|+++..+++...+...+++++.++|+|||.+++.+.
T Consensus 114 -~~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 114 -NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp -TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -ccccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 345679999998776444234567899999999999999999974
No 68
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.27 E-value=1.4e-12 Score=142.11 Aligned_cols=113 Identities=10% Similarity=0.073 Sum_probs=87.2
Q ss_pred HHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCce---EEeecc
Q 005981 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAM---VAAFAT 329 (666)
Q Consensus 255 ~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~---~~~~d~ 329 (666)
...+.+.+.+.+.. .+..+|||||||+|.++..+++. +|+|+|+|+.++.. +++++.... +...+.
T Consensus 92 ~~~~~~~l~~~~~~----~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~-----a~~~~~~~~~~~~~~~~~ 162 (416)
T 4e2x_A 92 FAMLARDFLATELT----GPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAK-----AREKGIRVRTDFFEKATA 162 (416)
T ss_dssp HHHHHHHHHHTTTC----SSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHH-----HHTTTCCEECSCCSHHHH
T ss_pred HHHHHHHHHHHhCC----CCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHH-----HHHcCCCcceeeechhhH
Confidence 34455666665541 34579999999999999999876 89999999987744 444454432 222335
Q ss_pred cCCCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 330 RRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 330 e~Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+.+++++++||+|++..+++|+ +++..+|+++.|+|||||++++.++
T Consensus 163 ~~l~~~~~~fD~I~~~~vl~h~-~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 163 DDVRRTEGPANVIYAANTLCHI-PYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp HHHHHHHCCEEEEEEESCGGGC-TTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhcccCCCCEEEEEECChHHhc-CCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 5667778999999999998888 7899999999999999999999864
No 69
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.27 E-value=9.6e-12 Score=122.14 Aligned_cols=96 Identities=22% Similarity=0.272 Sum_probs=74.3
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCC---CCC-CCCeeEEEeccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL---PYP-SQAFDLIHCSRC 347 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~L---pf~-d~sFDlVv~s~~ 347 (666)
...+|||||||+|.++..+++. +|+|+|+++.++..++ +++ ...+...+...+ ++. +++||+|+|+.+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~-----~~~-~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~ 125 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAAR-----AAG-AGEVHLASYAQLAEAKVPVGKDYDLICANFA 125 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHH-----HTC-SSCEEECCHHHHHTTCSCCCCCEEEEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHH-----Hhc-ccccchhhHHhhcccccccCCCccEEEECch
Confidence 3479999999999999999876 8999999998775544 332 222333343333 544 445999999888
Q ss_pred ccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 348 RINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 348 l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++ ..+...+++++.++|||||+++++++
T Consensus 126 l~--~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 126 LL--HQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp CC--SSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred hh--hhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 66 48889999999999999999999975
No 70
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.26 E-value=3.5e-12 Score=127.29 Aligned_cols=88 Identities=20% Similarity=0.299 Sum_probs=71.9
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecc-cCCCCC-CCCeeEEEeccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT-RRLPYP-SQAFDLIHCSRCRI 349 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~-e~Lpf~-d~sFDlVv~s~~l~ 349 (666)
+..+|||||||+|.++..+++. +|+|+|+++.++..++.+ .....+...|. +.+|++ +++||+|+|+
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~~~~~fD~v~~~---- 118 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELPAGLGAPFGLIVSR---- 118 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCCTTCCCCEEEEEEE----
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccCCcCCCCEEEEEeC----
Confidence 3479999999999999999876 899999999888665433 33344555666 678888 8999999976
Q ss_pred ccccChHHHHHHHHHhccCCeEEE
Q 005981 350 NWTRDDGILLLEVNRMLRAGGYFA 373 (666)
Q Consensus 350 h~~~d~~~~L~el~RvLkPGG~lv 373 (666)
.+...+++++.++|||||.++
T Consensus 119 ---~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 119 ---RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ---SCCSGGGGGHHHHEEEEEEEE
T ss_pred ---CCHHHHHHHHHHHcCCCcEEE
Confidence 466788999999999999998
No 71
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.25 E-value=3.2e-11 Score=121.36 Aligned_cols=102 Identities=20% Similarity=0.249 Sum_probs=79.5
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEeccccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINW 351 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~ 351 (666)
+..+|||+|||+|.++..|++. +|+|+|+++.++..++.+. ...+....+...|+..++++ ++||+|+|....+++
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~-~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~ 118 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKA-KERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMY 118 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHH-HhcCCceEEEECChhhcccC-CCccEEEEcCCchhc
Confidence 4579999999999999988876 8999999999998877543 34455555666677777765 689999986444444
Q ss_pred c--cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 352 T--RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 352 ~--~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
. .+...+++++.++|||||.+++..+
T Consensus 119 ~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 119 FDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 2 2356899999999999999998753
No 72
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.25 E-value=9e-12 Score=128.77 Aligned_cols=116 Identities=15% Similarity=0.137 Sum_probs=77.7
Q ss_pred HHHHHhhcccccCCCCCCeEEEECCCCchhHHHhcc---CCeEEEeCCcchHHHHHHHHHH----------------HcC
Q 005981 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP---RNVITMSIAPKDVHENQIQFAL----------------ERG 319 (666)
Q Consensus 259 i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~---~~V~gvDiS~~~l~~a~~~~a~----------------~rg 319 (666)
++.+.+.+.. ....+.+|||||||+|.++..++. .+|+|+|+|+.|+..++..... ..+
T Consensus 58 ~~~l~~~l~~--~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~ 135 (289)
T 2g72_A 58 LRCLAQTFAT--GEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEG 135 (289)
T ss_dssp HHHHHHHHHT--SCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHC
T ss_pred HHHHHHHhCC--CCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcC
Confidence 4455555431 112457999999999985544433 2899999999999776542211 011
Q ss_pred C--------------CceEEeecccC-CCC-----CCCCeeEEEecccccccc---cChHHHHHHHHHhccCCeEEEEEE
Q 005981 320 A--------------PAMVAAFATRR-LPY-----PSQAFDLIHCSRCRINWT---RDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 320 ~--------------~~~~~~~d~e~-Lpf-----~d~sFDlVv~s~~l~h~~---~d~~~~L~el~RvLkPGG~lv~st 376 (666)
. ...+...|+.. +|+ ++++||+|+|+.++++.. ++...+|+++.|+|||||+|++..
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 136 KGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp SCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 0 01123335555 554 346799999998876643 456799999999999999999984
No 73
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.24 E-value=1.2e-11 Score=134.09 Aligned_cols=122 Identities=17% Similarity=0.098 Sum_probs=90.8
Q ss_pred cHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccC
Q 005981 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR 331 (666)
Q Consensus 254 g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~ 331 (666)
+.+.+++.+.+.+.. ...+..+|||+|||+|.++..+++. +|+++|+++.++..++.+ +...++...+...|...
T Consensus 215 ~t~~ll~~l~~~l~~--~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n-~~~~~~~v~~~~~D~~~ 291 (381)
T 3dmg_A 215 ASLLLLEALQERLGP--EGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKG-LEANALKAQALHSDVDE 291 (381)
T ss_dssp HHHHHHHHHHHHHCT--TTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHH-HHHTTCCCEEEECSTTT
T ss_pred HHHHHHHHHHHhhcc--cCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHH-HHHcCCCeEEEEcchhh
Confidence 444555555554421 1124579999999999999998876 899999999999887754 44455555666667777
Q ss_pred CCCCCCCeeEEEeccccccc----ccChHHHHHHHHHhccCCeEEEEEECC
Q 005981 332 LPYPSQAFDLIHCSRCRINW----TRDDGILLLEVNRMLRAGGYFAWAAQP 378 (666)
Q Consensus 332 Lpf~d~sFDlVv~s~~l~h~----~~d~~~~L~el~RvLkPGG~lv~st~P 378 (666)
.+.++++||+|+|+..+++. ..+...++.++.++|||||.++++..+
T Consensus 292 ~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 292 ALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp TSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred ccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 77667899999988775541 234568999999999999999999754
No 74
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.24 E-value=1.9e-11 Score=127.90 Aligned_cols=103 Identities=18% Similarity=0.282 Sum_probs=78.3
Q ss_pred CCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHc------CC-CceEEeecccCCC----CC--CC
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALER------GA-PAMVAAFATRRLP----YP--SQ 337 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~r------g~-~~~~~~~d~e~Lp----f~--d~ 337 (666)
+..+|||||||+|.++..+++. +|+++|+++.++..++....... +. ...+...|.+.++ ++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 4579999999999999888754 89999999999988876554331 11 2345555677665 53 45
Q ss_pred CeeEEEecccccccc-cC---hHHHHHHHHHhccCCeEEEEEEC
Q 005981 338 AFDLIHCSRCRINWT-RD---DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 338 sFDlVv~s~~l~h~~-~d---~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+||+|+|+.+ +||. .+ ...+|.++.++|||||.++++++
T Consensus 114 ~fD~V~~~~~-l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 114 CFDICSCQFV-CHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp CEEEEEEETC-GGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CEEEEEEecc-hhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 9999999876 5554 34 35899999999999999999975
No 75
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.24 E-value=1.5e-11 Score=120.97 Aligned_cols=96 Identities=18% Similarity=0.272 Sum_probs=77.4
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccC--CCCCCCCeeEEEeccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR--LPYPSQAFDLIHCSRCRI 349 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~--Lpf~d~sFDlVv~s~~l~ 349 (666)
+..+|||+|||+|.++..+++. +++++|+++.++..+ +++. . .+...++.. +++++++||+|+++.+++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~-----~~~~-~-~~~~~d~~~~~~~~~~~~fD~v~~~~~l~ 104 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQA-----KEKL-D-HVVLGDIETMDMPYEEEQFDCVIFGDVLE 104 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHH-----HTTS-S-EEEESCTTTCCCCSCTTCEEEEEEESCGG
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHH-----HHhC-C-cEEEcchhhcCCCCCCCccCEEEECChhh
Confidence 4579999999999999988876 899999999876443 3332 2 344445554 667788999999998877
Q ss_pred ccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 350 NWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 350 h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
|+ .++..++.++.++|+|||.++++++
T Consensus 105 ~~-~~~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 105 HL-FDPWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp GS-SCHHHHHHHTGGGEEEEEEEEEEEE
T ss_pred hc-CCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 77 7889999999999999999999874
No 76
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.23 E-value=2e-11 Score=121.37 Aligned_cols=98 Identities=11% Similarity=0.140 Sum_probs=75.4
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecc-cccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSR-CRIN 350 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~-~l~h 350 (666)
+..+|||||||+|.++..+++. +|+|+|+++.++..++. +.....+...++..+++ +++||+|+|+. +++|
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~-----~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~ 113 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARK-----RLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGY 113 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHH-----HCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGG
T ss_pred CCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHH-----hCCCCEEEECCHHHccc-CCCCcEEEEcCchHhh
Confidence 4579999999999999988876 79999999988865543 22233455567777777 68999999765 5445
Q ss_pred cc--cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 351 WT--RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 351 ~~--~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+. .+...+|+++.++|||||.++++..
T Consensus 114 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 114 LKTTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp CCSHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 42 3346899999999999999999853
No 77
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.22 E-value=2e-11 Score=127.42 Aligned_cols=101 Identities=18% Similarity=0.158 Sum_probs=80.7
Q ss_pred CCCeEEEECCCCchhHHHhc--cC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCCCCCCCCeeEEEecc
Q 005981 274 HIRVVMDAGCGVASFGAYLL--PR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSR 346 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~--~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~Lpf~d~sFDlVv~s~ 346 (666)
+..+|||||||+|.++..++ .. +|+|+|+++.++..++.+ ....+.. ..+...|+..++++ ++||+|+|+.
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRL-AAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNG 195 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHH-HTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHH-HHhcCCCCceEEEECchhcCCcc-CCeEEEEECC
Confidence 45789999999999999985 22 899999999998777643 3334443 34566678888887 9999999988
Q ss_pred cccccccChHH---HHHHHHHhccCCeEEEEEEC
Q 005981 347 CRINWTRDDGI---LLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 347 ~l~h~~~d~~~---~L~el~RvLkPGG~lv~st~ 377 (666)
+++|+ .+... +++++.++|||||+++++..
T Consensus 196 ~~~~~-~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 196 LNIYE-PDDARVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp SGGGC-CCHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred hhhhc-CCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 87777 55553 79999999999999999863
No 78
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.22 E-value=4.8e-11 Score=113.16 Aligned_cols=111 Identities=14% Similarity=0.108 Sum_probs=79.1
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecc-c
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP-AMVAAFAT-R 330 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~-e 330 (666)
.+...+.+.+.. .+..+|||+|||+|.++..++.. +|+++|+++.++..++.+ +...+.. ..+...+. +
T Consensus 12 ~~~~~~~~~~~~----~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~~~~~~d~~~ 86 (178)
T 3hm2_A 12 HVRALAISALAP----KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSN-AINLGVSDRIAVQQGAPR 86 (178)
T ss_dssp HHHHHHHHHHCC----CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHH-HHTTTCTTSEEEECCTTG
T ss_pred HHHHHHHHHhcc----cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH-HHHhCCCCCEEEecchHh
Confidence 344555555541 34579999999999999888765 799999999988777643 3444554 33333333 3
Q ss_pred CCCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 331 RLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 331 ~Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.++...++||+|+++..+.+ ..+++++.++|||||.+++.+.
T Consensus 87 ~~~~~~~~~D~i~~~~~~~~-----~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 87 AFDDVPDNPDVIFIGGGLTA-----PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp GGGGCCSCCSEEEECC-TTC-----TTHHHHHHHTCCTTCEEEEEEC
T ss_pred hhhccCCCCCEEEECCcccH-----HHHHHHHHHhcCCCCEEEEEee
Confidence 44433389999998877544 6789999999999999999864
No 79
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.21 E-value=2.8e-11 Score=118.31 Aligned_cols=97 Identities=15% Similarity=0.104 Sum_probs=74.4
Q ss_pred CCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCCCCCCCeeEEEeccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lpf~d~sFDlVv~s~~l~ 349 (666)
+..+|||+|||+|.++..+++. +|+++|+++.++..++.. +...+.. ..+...|... +.+++||+|+++..+.
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~v~~~~~d~~~--~~~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEEN-AALNGIYDIALQKTSLLA--DVDGKFDLIVANILAE 136 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHH-HHHTTCCCCEEEESSTTT--TCCSCEEEEEEESCHH
T ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHHcCCCceEEEeccccc--cCCCCceEEEECCcHH
Confidence 4579999999999999888765 799999999998877654 3344544 3444444433 4468999999876643
Q ss_pred ccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 350 NWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 350 h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+ ...+++++.++|||||.+++++.
T Consensus 137 ~----~~~~l~~~~~~L~~gG~l~~~~~ 160 (205)
T 3grz_A 137 I----LLDLIPQLDSHLNEDGQVIFSGI 160 (205)
T ss_dssp H----HHHHGGGSGGGEEEEEEEEEEEE
T ss_pred H----HHHHHHHHHHhcCCCCEEEEEec
Confidence 3 36889999999999999999854
No 80
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.21 E-value=2.6e-11 Score=124.65 Aligned_cols=103 Identities=18% Similarity=0.202 Sum_probs=80.1
Q ss_pred CCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCC--CceEEeecccCCCC-CCCCeeEEEeccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLPY-PSQAFDLIHCSRC 347 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~--~~~~~~~d~e~Lpf-~d~sFDlVv~s~~ 347 (666)
+..+|||||||+|.++..++.. +|+|+|+++.++..++... ...+. ...+...++..+++ ++++||+|+|..+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRA-RNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHH-HTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 4579999999999888877653 8999999999988776443 33333 23455557777787 5789999999888
Q ss_pred cccc---ccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 348 RINW---TRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 348 l~h~---~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++. ..+...+|+++.++|||||.++++++
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 6552 24556899999999999999999974
No 81
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.21 E-value=1.1e-10 Score=111.58 Aligned_cols=99 Identities=20% Similarity=0.202 Sum_probs=76.5
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEec-ccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCS-RCRIN 350 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s-~~l~h 350 (666)
+..+|||+|||+|.++..++.. +|+++|+++.++..++. +.....+...+...+++++++||+|+++ .++++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~-----~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~ 120 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQ-----DFPEARWVVGDLSVDQISETDFDLIVSAGNVMGF 120 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHH-----HCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGG
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHH-----hCCCCcEEEcccccCCCCCCceeEEEECCcHHhh
Confidence 4579999999999999888866 89999999987765543 2222345556777778888899999987 45444
Q ss_pred cc-cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 351 WT-RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 351 ~~-~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+. ++...++.++.++|+|||.+++...
T Consensus 121 ~~~~~~~~~l~~~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 121 LAEDGREPALANIHRALGADGRAVIGFG 148 (195)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cChHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 42 2346899999999999999999864
No 82
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.20 E-value=1.1e-11 Score=129.02 Aligned_cols=104 Identities=15% Similarity=0.210 Sum_probs=74.0
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcC------------------------------
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERG------------------------------ 319 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg------------------------------ 319 (666)
...+|||||||+|.++..|+.. +|+|+|+++.++..|+........
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 4579999999999998888754 899999999998877643221100
Q ss_pred ----------------------------CCceEEeecccCC-----CCCCCCeeEEEecccccccc-----cChHHHHHH
Q 005981 320 ----------------------------APAMVAAFATRRL-----PYPSQAFDLIHCSRCRINWT-----RDDGILLLE 361 (666)
Q Consensus 320 ----------------------------~~~~~~~~d~e~L-----pf~d~sFDlVv~s~~l~h~~-----~d~~~~L~e 361 (666)
....+...|.... ++.+++||+|+|..++.++. .+...+|++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0123333343332 25678999999988754431 145689999
Q ss_pred HHHhccCCeEEEEEEC
Q 005981 362 VNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 362 l~RvLkPGG~lv~st~ 377 (666)
++++|||||+|++...
T Consensus 206 ~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHEEEEEEEEEECC
T ss_pred HHHHhCCCcEEEEecC
Confidence 9999999999999853
No 83
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.20 E-value=2.2e-11 Score=125.64 Aligned_cols=109 Identities=12% Similarity=0.046 Sum_probs=79.3
Q ss_pred HHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCC-
Q 005981 258 YLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY- 334 (666)
Q Consensus 258 ~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf- 334 (666)
.++.+.+.+.. .+..+|||||||+|.++..|+++ +|+|+|+|+.|+..++.+... . ....+.+.++.
T Consensus 33 ~~~~il~~l~l----~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~-~-----~v~~~~~~~~~~ 102 (261)
T 3iv6_A 33 DRENDIFLENI----VPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALAD-R-----CVTIDLLDITAE 102 (261)
T ss_dssp HHHHHHHTTTC----CTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSS-S-----CCEEEECCTTSC
T ss_pred HHHHHHHhcCC----CCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHh-c-----cceeeeeecccc
Confidence 34555665542 34579999999999999999876 899999999998766543221 1 11122333332
Q ss_pred ----CCCCeeEEEecccccccc-cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 335 ----PSQAFDLIHCSRCRINWT-RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 335 ----~d~sFDlVv~s~~l~h~~-~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.+++||+|+|+.+++|+. ++...+++++.++| |||.++++..
T Consensus 103 ~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 103 IPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp CCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred cccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 257899999998888874 33458999999999 9999999964
No 84
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.19 E-value=2.7e-10 Score=111.37 Aligned_cols=112 Identities=13% Similarity=-0.013 Sum_probs=80.7
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCc-eEEeecccC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPA-MVAAFATRR 331 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~-~~~~~d~e~ 331 (666)
.....+.+.+.. .+..+|||+|||+|.++..+++. +|+++|+++.++..++.+.. ..+... .+...+...
T Consensus 27 ~i~~~~l~~l~~----~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~v~~~~~d~~~ 101 (204)
T 3e05_A 27 EVRAVTLSKLRL----QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLK-KFVARNVTLVEAFAPE 101 (204)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHH-HHTCTTEEEEECCTTT
T ss_pred HHHHHHHHHcCC----CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHH-HhCCCcEEEEeCChhh
Confidence 333445555542 34579999999999998888754 79999999999988875443 344433 344445433
Q ss_pred CCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 332 LPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 332 Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.....++||+|++..... +...++.++.++|||||.+++.+.
T Consensus 102 ~~~~~~~~D~i~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 102 GLDDLPDPDRVFIGGSGG----MLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp TCTTSCCCSEEEESCCTT----CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred hhhcCCCCCEEEECCCCc----CHHHHHHHHHHhcCCCeEEEEEec
Confidence 333347899999876532 678999999999999999999864
No 85
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.18 E-value=7.4e-11 Score=115.99 Aligned_cols=86 Identities=22% Similarity=0.274 Sum_probs=72.4
Q ss_pred CCCeEEEECCCCchhHHHhccCCeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEeccccccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPRNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWTR 353 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~~ 353 (666)
+..+|||||||+|.++..+. .+|+++|+++. ...+...++..+++++++||+|+|+.++ |+ .
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~-~ 128 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR-NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCLSL-MG-T 128 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC-SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEESCC-CS-S
T ss_pred CCCeEEEECCcCCHHHHHhh-ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEehhc-cc-c
Confidence 34689999999999998885 68999999985 1224455677888888999999998876 55 7
Q ss_pred ChHHHHHHHHHhccCCeEEEEEEC
Q 005981 354 DDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 354 d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+...+|.++.++|+|||.+++++.
T Consensus 129 ~~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 129 NIRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHhCCCCeEEEEEEc
Confidence 889999999999999999999864
No 86
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.17 E-value=5.5e-11 Score=120.73 Aligned_cols=134 Identities=13% Similarity=0.101 Sum_probs=102.9
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhccc-cccccccCCCCCCCCCccceEEecc-ccccCC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRGL-IGVMHDWCEPFDTYPRTYDLLHAAG-LFSVES 596 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erGl-ig~~~~~ce~~~~yp~tyDliha~~-~f~~~~ 596 (666)
..|||+|||.|.++.+|++.+. +|+.+|. +.+++.+.++.- +.+.....+.++. +.+||+|.|.. +|.+..
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADSFG-----TVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTTSS-----EEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSC
T ss_pred CcEEEeCCcCCHHHHHHHHcCC-----eEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcC
Confidence 4699999999999999999976 5666763 678888888733 4455444444443 79999999997 888876
Q ss_pred CCCCHHHHHHHhhhcccCCeEEEEEeC-----------------------------------------------h-----
Q 005981 597 KRCNMSTIMLEMDRMLRPGGHVYIRDS-----------------------------------------------I----- 624 (666)
Q Consensus 597 ~~c~~~~~l~E~dRiLRPgG~~ii~d~-----------------------------------------------~----- 624 (666)
+.-+...+|.++.|+|||||+++|.+. .
T Consensus 126 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITH 205 (263)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEEE
Confidence 555567899999999999999999520 0
Q ss_pred ---------hHHHHHHHHHHhcCcEEEEEeccCCCCCceEEEEEEeC
Q 005981 625 ---------DVMDELQEIGKAMGWHVTLRETAEGPHASYRILTADKR 662 (666)
Q Consensus 625 ---------~~~~~~~~i~~~l~W~~~~~~~~~~~~~~e~~l~~~k~ 662 (666)
-..+++++++++-.+++....... ....+++++|+
T Consensus 206 ~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~---~~~~~~va~K~ 249 (263)
T 3pfg_A 206 HEESHRITLFTREQYERAFTAAGLSVEFMPGGP---SGRGLFTGLPG 249 (263)
T ss_dssp EEEEEEEECCCHHHHHHHHHHTTEEEEEESSTT---TSSCEEEEEEC
T ss_pred EEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCC---CCceeEEEecC
Confidence 026889999999999887664433 35678999985
No 87
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.17 E-value=2e-10 Score=115.65 Aligned_cols=97 Identities=9% Similarity=0.074 Sum_probs=75.5
Q ss_pred CCCeEEEECCCCchhHHHhcc----CCeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCCCC---CCCeeEEEec
Q 005981 274 HIRVVMDAGCGVASFGAYLLP----RNVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYP---SQAFDLIHCS 345 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~----~~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lpf~---d~sFDlVv~s 345 (666)
...+|||||||+|.++..++. .+|+++|+++.++..++.. +...++. ..+...+++.+++. +++||+|+|.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKL-SEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHH-HHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH-HHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 457999999999998888772 2899999999999877644 4444553 34555566666653 5799999975
Q ss_pred ccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 346 RCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 346 ~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
.+ .+...++.++.++|||||.+++..
T Consensus 149 ~~-----~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 149 AV-----ARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp CC-----SCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cc-----CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 52 667899999999999999999874
No 88
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.17 E-value=8.1e-11 Score=114.53 Aligned_cols=135 Identities=14% Similarity=0.131 Sum_probs=102.5
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhccc-cccccccCCCCCCCCCccceEEeccccccCCC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRGL-IGVMHDWCEPFDTYPRTYDLLHAAGLFSVESK 597 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erGl-ig~~~~~ce~~~~yp~tyDliha~~~f~~~~~ 597 (666)
..|||+|||.|.++.+|++.|. +|+.+|. +.+++.+.++.- +.+.....+.++.-+.+||+|.+..++.+..
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~- 116 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGH-----QIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMG- 116 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTC-----CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCC-
T ss_pred CeEEEecCCCCHHHHHHHhcCC-----eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCC-
Confidence 3599999999999999999976 5666663 678888888743 4444444444443348999999999988875
Q ss_pred CCCHHHHHHHhhhcccCCeEEEEEeCh----------------hHHHHHHHHHHhcCcEEEEEeccCCCCCceEEEEEEe
Q 005981 598 RCNMSTIMLEMDRMLRPGGHVYIRDSI----------------DVMDELQEIGKAMGWHVTLRETAEGPHASYRILTADK 661 (666)
Q Consensus 598 ~c~~~~~l~E~dRiLRPgG~~ii~d~~----------------~~~~~~~~i~~~l~W~~~~~~~~~~~~~~e~~l~~~k 661 (666)
.-+...+|.++.|+|||||++++.+.. -..+.++++++...|++.......+ .+...|...|
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~--~p~~~l~~~~ 194 (203)
T 3h2b_A 117 PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR--FPHAYLTAEA 194 (203)
T ss_dssp TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT--SSEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC--Ccchhhhhhh
Confidence 236689999999999999999998522 1378899999999999887765544 5666666655
Q ss_pred C
Q 005981 662 R 662 (666)
Q Consensus 662 ~ 662 (666)
+
T Consensus 195 ~ 195 (203)
T 3h2b_A 195 S 195 (203)
T ss_dssp C
T ss_pred h
Confidence 3
No 89
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.17 E-value=7.7e-11 Score=114.29 Aligned_cols=103 Identities=15% Similarity=0.147 Sum_probs=76.4
Q ss_pred CCCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCC--CceEEeecccCCC-CCCCCeeEEEec
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLP-YPSQAFDLIHCS 345 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~--~~~~~~~d~e~Lp-f~d~sFDlVv~s 345 (666)
+..+|||+|||+|.++..+++. +|+|+|+++.++..++.. +...++ ...+...|+..++ +.+++||+|+++
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKK-LTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH-HHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 4479999999999988887653 899999999999887754 344444 2345555666665 566899999987
Q ss_pred cccccc-----cc---ChHHHHHHHHHhccCCeEEEEEEC
Q 005981 346 RCRINW-----TR---DDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 346 ~~l~h~-----~~---d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
..++.. .. +...+++++.++|||||.+++...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 654221 11 234799999999999999999864
No 90
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.17 E-value=8.1e-11 Score=119.98 Aligned_cols=115 Identities=17% Similarity=0.120 Sum_probs=82.7
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhcc-----CCeEEEeCCcc------hHHHHHHHHHHHcCCC--ce
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPK------DVHENQIQFALERGAP--AM 323 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~------~l~~a~~~~a~~rg~~--~~ 323 (666)
.....+.+.+.. .+..+|||||||+|.++..+++ .+|+|+|+++. ++..++.+. ...++. ..
T Consensus 30 ~~~~~l~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~-~~~~~~~~v~ 104 (275)
T 3bkx_A 30 AHRLAIAEAWQV----KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHL-LAGPLGDRLT 104 (275)
T ss_dssp HHHHHHHHHHTC----CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHH-HTSTTGGGEE
T ss_pred HHHHHHHHHcCC----CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHH-HhcCCCCceE
Confidence 344455555431 3457999999999998888764 37999999997 787776443 333432 23
Q ss_pred EEeec---ccCCCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 324 VAAFA---TRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 324 ~~~~d---~e~Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+...| ...+++++++||+|+|..+++|+ .++..+++.+.++++|||++++.+.
T Consensus 105 ~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 105 VHFNTNLSDDLGPIADQHFDRVVLAHSLWYF-ASANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp EECSCCTTTCCGGGTTCCCSEEEEESCGGGS-SCHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred EEECChhhhccCCCCCCCEEEEEEccchhhC-CCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 44444 45567778999999999987777 7777777777777777999999864
No 91
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.17 E-value=1.1e-10 Score=115.37 Aligned_cols=102 Identities=17% Similarity=0.244 Sum_probs=77.4
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCC--CCCCCeeEEEecc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLP--YPSQAFDLIHCSR 346 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lp--f~d~sFDlVv~s~ 346 (666)
...+|||||||+|.++..++.. +|+|+|+++.++..++.+. ...++. ..+...++..++ +++++||+|+++.
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKV-LEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH-HHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHH-HHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 3478999999999998888753 8999999999998877544 344543 345555666666 7778999999875
Q ss_pred ccccccc--------ChHHHHHHHHHhccCCeEEEEEEC
Q 005981 347 CRINWTR--------DDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 347 ~l~h~~~--------d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
. .+|.. ....++.++.++|+|||.+++.+.
T Consensus 120 ~-~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 120 S-DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp C-CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred C-CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 4 33322 125799999999999999999863
No 92
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.17 E-value=1.7e-10 Score=113.19 Aligned_cols=134 Identities=18% Similarity=0.240 Sum_probs=98.9
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhccccccccccCCCC---CCCC-CccceEEecccccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRGLIGVMHDWCEPF---DTYP-RTYDLLHAAGLFSV 594 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erGlig~~~~~ce~~---~~yp-~tyDliha~~~f~~ 594 (666)
.+|||+|||.|.++.+|++.|. +|+.+| ++.+++.+.+++.+.+.....+.+ +..+ .+||+|.|..++.
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~- 127 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRGI-----EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL- 127 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTTC-----EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-
T ss_pred CEEEEeCCCCCHHHHHHHHCCC-----EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh-
Confidence 6799999999999999999976 566666 368899999986655544333333 3234 5699999998887
Q ss_pred CCCCCCHHHHHHHhhhcccCCeEEEEEeCh--------------------------------hHHHHHHHHHHhcCcEEE
Q 005981 595 ESKRCNMSTIMLEMDRMLRPGGHVYIRDSI--------------------------------DVMDELQEIGKAMGWHVT 642 (666)
Q Consensus 595 ~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~--------------------------------~~~~~~~~i~~~l~W~~~ 642 (666)
. .+...+|.++.|+|||||+++|.+.. -..+.+.+++++-.+++.
T Consensus 128 ~---~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 204 (227)
T 3e8s_A 128 H---QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLV 204 (227)
T ss_dssp S---SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEE
T ss_pred h---hhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEE
Confidence 2 34579999999999999999997531 146889999999999987
Q ss_pred EEeccCCCC---CceEEEEEEeC
Q 005981 643 LRETAEGPH---ASYRILTADKR 662 (666)
Q Consensus 643 ~~~~~~~~~---~~e~~l~~~k~ 662 (666)
.......+. ....+++++|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 205 SLQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp EEECCCCTTCSSCSCEEEEEEEC
T ss_pred EEecCCCCCCCCceeEEEEeecC
Confidence 654422221 23567777774
No 93
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.16 E-value=3.1e-11 Score=121.17 Aligned_cols=100 Identities=11% Similarity=0.013 Sum_probs=75.5
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCC-----CCeeEEEecc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPS-----QAFDLIHCSR 346 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d-----~sFDlVv~s~ 346 (666)
+..+|||||||+|.++..|++. +|+|+|+++.++..++... ......+...|+..+++.. ..||+|+++.
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhC---cccCceEEECcccccccccccccccCccEEEEcc
Confidence 4478999999999999998875 8999999999887665332 1123345555655544321 3499999988
Q ss_pred ccccccc--ChHHHHHHHHHhccCCeEEEEEEC
Q 005981 347 CRINWTR--DDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 347 ~l~h~~~--d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++|+ + +...+++++.++|||||++++..+
T Consensus 133 ~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 133 GFHHI-PVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp SSTTS-CGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred hhhcC-CHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 86666 5 567999999999999999988865
No 94
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.16 E-value=3.5e-11 Score=120.40 Aligned_cols=102 Identities=16% Similarity=0.213 Sum_probs=76.4
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCc-eEEeecccCC-C--CCCCCeeEEEec
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPA-MVAAFATRRL-P--YPSQAFDLIHCS 345 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~-~~~~~d~e~L-p--f~d~sFDlVv~s 345 (666)
...+|||||||+|.++..++.. +|+|+|+++.++..++. .+.+.++.+ .+...|+..+ + +++++||.|++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~-~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLA-SAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHH-HHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHH-HHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 4478999999999999888754 69999999999988764 444555543 4445555553 3 678999999976
Q ss_pred ccccccccCh--------HHHHHHHHHhccCCeEEEEEEC
Q 005981 346 RCRINWTRDD--------GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 346 ~~l~h~~~d~--------~~~L~el~RvLkPGG~lv~st~ 377 (666)
.. ..|.... ..++.++.|+|||||.|++++.
T Consensus 113 ~~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 113 FP-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp SC-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CC-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 43 4443221 2599999999999999999974
No 95
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.16 E-value=3.5e-11 Score=121.53 Aligned_cols=103 Identities=13% Similarity=0.158 Sum_probs=76.8
Q ss_pred CCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCC------------------------------
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA------------------------------ 320 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~------------------------------ 320 (666)
++.+|||||||+|.++..++.. +|+|+|+++.++..++..... .+.
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKK-EPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTT-CTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhc-CCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 4578999999999998888765 799999999998777643321 110
Q ss_pred Cc-eEEeecccCCC-CCC---CCeeEEEecccccccc---cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 321 PA-MVAAFATRRLP-YPS---QAFDLIHCSRCRINWT---RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 321 ~~-~~~~~d~e~Lp-f~d---~sFDlVv~s~~l~h~~---~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.. .+...++..+. +++ ++||+|+|+.++++.. .+...+|+++.|+|||||+|++...
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 02 34455555543 355 8999999998877443 3466899999999999999999863
No 96
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.15 E-value=6.3e-11 Score=117.66 Aligned_cols=102 Identities=11% Similarity=0.195 Sum_probs=76.7
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCC--CCCCCeeEEEecc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLP--YPSQAFDLIHCSR 346 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lp--f~d~sFDlVv~s~ 346 (666)
...+|||||||+|.++..|+.. +|+|+|+++.++..++.+ +.+.++. ..+...|+..++ +++++||.|++..
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~-~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQK-VKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHH-HHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHH-HHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 3468999999999999888753 799999999999887644 4445554 345555666665 6788999998654
Q ss_pred cccccccC--------hHHHHHHHHHhccCCeEEEEEEC
Q 005981 347 CRINWTRD--------DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 347 ~l~h~~~d--------~~~~L~el~RvLkPGG~lv~st~ 377 (666)
. ..|... ...++.++.++|||||.+++.+.
T Consensus 117 ~-~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 117 S-DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp C-CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred C-CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 3 333221 25789999999999999999873
No 97
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.15 E-value=2.6e-10 Score=112.52 Aligned_cols=97 Identities=12% Similarity=-0.006 Sum_probs=73.9
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCCCCCCCCeeEEEeccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~Lpf~d~sFDlVv~s~~l~ 349 (666)
+..+|||+|||+|.++..++.. +|+++|+++.++..++. .++..++. ..+...|..........||+|++...
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~-~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~-- 131 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQK-NIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGG-- 131 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSC--
T ss_pred CCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHH-HHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCc--
Confidence 4579999999999999888765 89999999999988764 44455655 34445555552223357999997653
Q ss_pred ccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 350 NWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 350 h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.+.. ++.++.++|||||.+++++.
T Consensus 132 ---~~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 132 ---GSQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp ---CCHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred ---ccHH-HHHHHHHhcCCCcEEEEEec
Confidence 2556 99999999999999999864
No 98
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.14 E-value=1.2e-10 Score=118.73 Aligned_cols=91 Identities=18% Similarity=0.337 Sum_probs=72.3
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEeccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~ 349 (666)
+..+|||||||+|.++..+++. +|+++|+++.++..++ +++....+...+.+.+++++++||+|++..+
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~-----~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-- 157 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAA-----KRYPQVTFCVASSHRLPFSDTSMDAIIRIYA-- 157 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHH-----HHCTTSEEEECCTTSCSBCTTCEEEEEEESC--
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-----HhCCCcEEEEcchhhCCCCCCceeEEEEeCC--
Confidence 4579999999999998888764 8999999998775543 3333445666677888888899999997644
Q ss_pred ccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 350 NWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 350 h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
...+.++.|+|||||.+++.++
T Consensus 158 ------~~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 158 ------PCKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp ------CCCHHHHHHHEEEEEEEEEEEE
T ss_pred ------hhhHHHHHHhcCCCcEEEEEEc
Confidence 2358999999999999999875
No 99
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.14 E-value=9.5e-11 Score=116.44 Aligned_cols=103 Identities=15% Similarity=0.035 Sum_probs=75.4
Q ss_pred CCCeEEEECCC-CchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccC-CCCCCCCeeEEEecccc
Q 005981 274 HIRVVMDAGCG-VASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR-LPYPSQAFDLIHCSRCR 348 (666)
Q Consensus 274 ~~~~VLDIGCG-tG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~-Lpf~d~sFDlVv~s~~l 348 (666)
+..+|||+||| +|.++..++.. +|+|+|+++.++..++.+ +...+....+...|... .++++++||+|+|+..+
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRN-IERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHH-HHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHH-HHHhCCCcEEEeCCchhhhhcccCceeEEEECCCC
Confidence 45799999999 99988887754 899999999999887754 44455544555555432 24567899999987654
Q ss_pred ccccc------------------ChHHHHHHHHHhccCCeEEEEEEC
Q 005981 349 INWTR------------------DDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 349 ~h~~~------------------d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++... ....++.++.++|||||.+++...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 180 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLP 180 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEec
Confidence 43211 136789999999999999999753
No 100
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.14 E-value=9.9e-11 Score=111.89 Aligned_cols=122 Identities=13% Similarity=0.093 Sum_probs=85.6
Q ss_pred cccccHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceE
Q 005981 250 QFIHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMV 324 (666)
Q Consensus 250 ~F~~g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~ 324 (666)
......+.+.+.+.+.+... ....+|||+|||+|.++..++.. +|+++|+++.++..++.+.. ..++. ..+
T Consensus 23 ~~rp~~~~~~~~~~~~l~~~---~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~~~~ 98 (187)
T 2fhp_A 23 NTRPTTDKVKESIFNMIGPY---FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIA-ITKEPEKFEV 98 (187)
T ss_dssp SSCCCCHHHHHHHHHHHCSC---CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH-HHTCGGGEEE
T ss_pred CcCcCHHHHHHHHHHHHHhh---cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHH-HhCCCcceEE
Confidence 33455666777777777532 24579999999999998877654 79999999999988775443 33432 334
Q ss_pred EeecccC----CCCCCCCeeEEEecccccccccChHHHHHHH--HHhccCCeEEEEEEC
Q 005981 325 AAFATRR----LPYPSQAFDLIHCSRCRINWTRDDGILLLEV--NRMLRAGGYFAWAAQ 377 (666)
Q Consensus 325 ~~~d~e~----Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el--~RvLkPGG~lv~st~ 377 (666)
...|+.. +++.+++||+|+++.. ++. .+....+..+ .++|+|||.+++...
T Consensus 99 ~~~d~~~~~~~~~~~~~~fD~i~~~~~-~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 99 RKMDANRALEQFYEEKLQFDLVLLDPP-YAK-QEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp EESCHHHHHHHHHHTTCCEEEEEECCC-GGG-CCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred EECcHHHHHHHHHhcCCCCCEEEECCC-CCc-hhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 4445433 2223678999998765 333 4566777777 899999999999864
No 101
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.14 E-value=1.6e-10 Score=123.59 Aligned_cols=100 Identities=13% Similarity=0.136 Sum_probs=78.7
Q ss_pred CCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCCCCCCCCeeEEEecccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSRCR 348 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~Lpf~d~sFDlVv~s~~l 348 (666)
+..+|||||||+|.++..++++ +|+|+|+++ ++..++. .+...+.. ..+...+++++++++++||+|+|..+.
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVK-IVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHH-HHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHH-HHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 3479999999999999888876 899999995 8877764 45555654 456666788888888999999986532
Q ss_pred --cccccChHHHHHHHHHhccCCeEEEEE
Q 005981 349 --INWTRDDGILLLEVNRMLRAGGYFAWA 375 (666)
Q Consensus 349 --~h~~~d~~~~L~el~RvLkPGG~lv~s 375 (666)
++...+...++.++.|+|||||.++..
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 233356779999999999999998754
No 102
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.14 E-value=5.1e-11 Score=117.15 Aligned_cols=119 Identities=13% Similarity=0.139 Sum_probs=81.7
Q ss_pred cHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCC---CceEEee
Q 005981 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA---PAMVAAF 327 (666)
Q Consensus 254 g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~---~~~~~~~ 327 (666)
..+.+.+.+.+.+.... ...+|||+|||+|.++..++.+ +|+|+|+++.++..++.+. ...++ ...+...
T Consensus 36 ~~~~~~~~l~~~l~~~~---~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~-~~~~~~~~~v~~~~~ 111 (201)
T 2ift_A 36 TGDRVKETLFNWLMPYI---HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNL-QTLKCSSEQAEVINQ 111 (201)
T ss_dssp --CHHHHHHHHHHHHHH---TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHH-HHTTCCTTTEEEECS
T ss_pred CHHHHHHHHHHHHHHhc---CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHH-HHhCCCccceEEEEC
Confidence 33445555555554211 2368999999999998875543 7999999999998887544 44554 3344555
Q ss_pred cccCC-C-CCCCC-eeEEEecccccccccChHHHHHHH--HHhccCCeEEEEEECC
Q 005981 328 ATRRL-P-YPSQA-FDLIHCSRCRINWTRDDGILLLEV--NRMLRAGGYFAWAAQP 378 (666)
Q Consensus 328 d~e~L-p-f~d~s-FDlVv~s~~l~h~~~d~~~~L~el--~RvLkPGG~lv~st~P 378 (666)
|+..+ + +.+++ ||+|++... ++. .+...++.++ .|+|||||.+++++.+
T Consensus 112 d~~~~~~~~~~~~~fD~I~~~~~-~~~-~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 112 SSLDFLKQPQNQPHFDVVFLDPP-FHF-NLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp CHHHHTTSCCSSCCEEEEEECCC-SSS-CHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred CHHHHHHhhccCCCCCEEEECCC-CCC-ccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 54443 2 23678 999998766 443 5566888888 6789999999998753
No 103
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.14 E-value=1.7e-10 Score=112.96 Aligned_cols=109 Identities=11% Similarity=0.049 Sum_probs=81.0
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLP 333 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lp 333 (666)
.....+.+.+.. .+..+|||||||+|.++..+++. +|+++|+++.++..++.+.. ..+.. ..+...|.....
T Consensus 64 ~~~~~~~~~l~~----~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~~d~~~~~ 138 (210)
T 3lbf_A 64 YMVARMTELLEL----TPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLK-NLDLHNVSTRHGDGWQGW 138 (210)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHH-HTTCCSEEEEESCGGGCC
T ss_pred HHHHHHHHhcCC----CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHH-HcCCCceEEEECCcccCC
Confidence 445555665542 34579999999999999888765 89999999999887775443 34443 344555665655
Q ss_pred CCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 334 YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 334 f~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
..+++||+|++..++.++ .+ ++.++|||||.+++...
T Consensus 139 ~~~~~~D~i~~~~~~~~~-~~------~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 139 QARAPFDAIIVTAAPPEI-PT------ALMTQLDEGGILVLPVG 175 (210)
T ss_dssp GGGCCEEEEEESSBCSSC-CT------HHHHTEEEEEEEEEEEC
T ss_pred ccCCCccEEEEccchhhh-hH------HHHHhcccCcEEEEEEc
Confidence 567899999998876666 32 68999999999999864
No 104
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.13 E-value=2.8e-10 Score=132.07 Aligned_cols=117 Identities=15% Similarity=0.203 Sum_probs=90.0
Q ss_pred HHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHH-----cCCC-ce
Q 005981 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALE-----RGAP-AM 323 (666)
Q Consensus 255 ~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~-----rg~~-~~ 323 (666)
....++.+.+.+.. ..+.+|||||||+|.++..|++. +|+|+|+++.++..|+.+.... .+.. ..
T Consensus 706 ~eqRle~LLelL~~----~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVe 781 (950)
T 3htx_A 706 SKQRVEYALKHIRE----SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSAT 781 (950)
T ss_dssp HHHHHHHHHHHHHH----SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEE
T ss_pred HHHHHHHHHHHhcc----cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceE
Confidence 34556666666653 24579999999999999999864 6999999999998887544432 1332 34
Q ss_pred EEeecccCCCCCCCCeeEEEecccccccccChH--HHHHHHHHhccCCeEEEEEEC
Q 005981 324 VAAFATRRLPYPSQAFDLIHCSRCRINWTRDDG--ILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 324 ~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~~d~~--~~L~el~RvLkPGG~lv~st~ 377 (666)
+...|+..+++.+++||+|+|..+++|+ .+.. .+++++.|+|||| .++++++
T Consensus 782 fiqGDa~dLp~~d~sFDlVV~~eVLeHL-~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 782 LYDGSILEFDSRLHDVDIGTCLEVIEHM-EEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp EEESCTTSCCTTSCSCCEEEEESCGGGS-CHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred EEECchHhCCcccCCeeEEEEeCchhhC-ChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 5666788899988999999999998887 4443 6899999999999 8878764
No 105
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.12 E-value=1.5e-10 Score=111.57 Aligned_cols=118 Identities=16% Similarity=0.205 Sum_probs=85.5
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCCCCCCccceEEecccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFDTYPRTYDLLHAAGLF 592 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~~yp~tyDliha~~~f 592 (666)
.+|||+|||.|.++.+|++.|. +|+.+|. +.+++.+.++ |+ +.+.+...+.++. +.+||+|.+..++
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l 107 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANGY-----DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVL 107 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCG
T ss_pred CeEEEEcCCCCHHHHHHHHCCC-----eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchh
Confidence 3799999999999999999976 5556653 4566665543 43 4444444344443 7899999999988
Q ss_pred ccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh--------------hHHHHHHHHHHhcCcEEEEEec
Q 005981 593 SVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI--------------DVMDELQEIGKAMGWHVTLRET 646 (666)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~--------------~~~~~~~~i~~~l~W~~~~~~~ 646 (666)
.+... -+...+|.++.|+|||||++++.+.. -..+.++++++. |++.....
T Consensus 108 ~~~~~-~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~~ 172 (199)
T 2xvm_A 108 MFLEA-KTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYNE 172 (199)
T ss_dssp GGSCG-GGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEEC
T ss_pred hhCCH-HHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEecc
Confidence 87652 35679999999999999998875321 135678888887 88766543
No 106
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.12 E-value=2.4e-10 Score=113.53 Aligned_cols=98 Identities=14% Similarity=0.093 Sum_probs=68.7
Q ss_pred CCCCeEEEECCCCchhHHHhcc----CCeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccC----CCCCCCCeeEEEe
Q 005981 273 HHIRVVMDAGCGVASFGAYLLP----RNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR----LPYPSQAFDLIHC 344 (666)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~----~~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~----Lpf~d~sFDlVv~ 344 (666)
.++.+|||+|||+|.++..+++ .+|+|+|+|+.++.... +.++.+. .......|... .++. ++||+|+|
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~-~~a~~~~-~v~~~~~d~~~~~~~~~~~-~~fD~V~~ 132 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLL-ELVRERN-NIIPLLFDASKPWKYSGIV-EKVDLIYQ 132 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHH-HHHHHCS-SEEEECSCTTCGGGTTTTC-CCEEEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHH-HHHhcCC-CeEEEEcCCCCchhhcccc-cceeEEEE
Confidence 3457999999999998887765 37999999998875443 4454442 22333344444 3444 79999998
Q ss_pred cccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 345 SRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 345 s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
+. ..+ .+...+++++.|+|||||.|+++.
T Consensus 133 ~~-~~~--~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 133 DI-AQK--NQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CC-CST--THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ec-cCh--hHHHHHHHHHHHHhCCCCEEEEEE
Confidence 62 122 223356899999999999999984
No 107
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.11 E-value=3.1e-10 Score=121.02 Aligned_cols=111 Identities=16% Similarity=0.181 Sum_probs=81.5
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCC--CceEEeecccC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRR 331 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~--~~~~~~~d~e~ 331 (666)
.+.+.+.+.+.. .+..+|||||||+|.++..+++. +|+|+|+++ ++..++. .....+. ...+...+++.
T Consensus 51 ~~~~~i~~~~~~----~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~-~~~~~~~~~~i~~~~~d~~~ 124 (340)
T 2fyt_A 51 SYRDFIYQNPHI----FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMD-IIRLNKLEDTITLIKGKIEE 124 (340)
T ss_dssp HHHHHHHHCGGG----TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHH-HHHHTTCTTTEEEEESCTTT
T ss_pred HHHHHHHhhhhh----cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHH-HHHHcCCCCcEEEEEeeHHH
Confidence 345566555432 34579999999999999888765 799999997 8877654 4444554 23455567888
Q ss_pred CCCCCCCeeEEEecccc--cccccChHHHHHHHHHhccCCeEEE
Q 005981 332 LPYPSQAFDLIHCSRCR--INWTRDDGILLLEVNRMLRAGGYFA 373 (666)
Q Consensus 332 Lpf~d~sFDlVv~s~~l--~h~~~d~~~~L~el~RvLkPGG~lv 373 (666)
+++++++||+|++..+. ++...+...++.++.|+|||||.++
T Consensus 125 ~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 125 VHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 88888899999986532 2222445689999999999999997
No 108
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.11 E-value=2.7e-10 Score=119.28 Aligned_cols=97 Identities=11% Similarity=0.107 Sum_probs=74.2
Q ss_pred CCCCeEEEECCCCchhHHHh-c---cCCeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCCCCCCCeeEEEeccc
Q 005981 273 HHIRVVMDAGCGVASFGAYL-L---PRNVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYPSQAFDLIHCSRC 347 (666)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L-~---~~~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lpf~d~sFDlVv~s~~ 347 (666)
.++.+|||||||+|.++..+ + ..+|+|+|+++.++..|+...+ +.++. ..+...|+..++ +++||+|++...
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~-~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~ 197 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIE-GLGVDGVNVITGDETVID--GLEFDVLMVAAL 197 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHH-HHTCCSEEEEESCGGGGG--GCCCSEEEECTT
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHH-hcCCCCeEEEECchhhCC--CCCcCEEEECCC
Confidence 45689999999999765433 2 3389999999999988875544 34543 344555666665 689999997543
Q ss_pred ccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 348 RINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 348 l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
.++...+++++.|+|||||.+++..
T Consensus 198 ----~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 198 ----AEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp ----CSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ----ccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 3778899999999999999999985
No 109
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.10 E-value=1.6e-10 Score=113.65 Aligned_cols=119 Identities=9% Similarity=0.021 Sum_probs=83.0
Q ss_pred ccHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCC-CceEEeec
Q 005981 253 HGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA-PAMVAAFA 328 (666)
Q Consensus 253 ~g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~-~~~~~~~d 328 (666)
...+.+.+.+.+.+.... +..+|||+|||+|.++..++.+ +|+++|+++.++..++.+ +...++ ...+...|
T Consensus 36 p~~~~~~~~l~~~l~~~~---~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~-~~~~~~~~v~~~~~D 111 (202)
T 2fpo_A 36 PTTDRVRETLFNWLAPVI---VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKN-LATLKAGNARVVNSN 111 (202)
T ss_dssp --CHHHHHHHHHHHHHHH---TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHH-HHHTTCCSEEEECSC
T ss_pred CCHHHHHHHHHHHHHhhc---CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHH-HHHcCCCcEEEEECC
Confidence 344555666666554211 3478999999999999875543 799999999999888754 444454 33445555
Q ss_pred ccC-CCCCCCCeeEEEecccccccccChHHHHHHHHH--hccCCeEEEEEEC
Q 005981 329 TRR-LPYPSQAFDLIHCSRCRINWTRDDGILLLEVNR--MLRAGGYFAWAAQ 377 (666)
Q Consensus 329 ~e~-Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~R--vLkPGG~lv~st~ 377 (666)
+.. ++..+++||+|++... ++. .+...++.++.+ +|+|||.++++..
T Consensus 112 ~~~~~~~~~~~fD~V~~~~p-~~~-~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 112 AMSFLAQKGTPHNIVFVDPP-FRR-GLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp HHHHHSSCCCCEEEEEECCS-SST-TTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHHHHhhcCCCCCEEEECCC-CCC-CcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 444 4556679999998765 443 566778888865 5999999999864
No 110
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.10 E-value=5.4e-10 Score=110.12 Aligned_cols=139 Identities=15% Similarity=0.178 Sum_probs=97.4
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhcc-----------ccccccccCCCCCCCCCccceEE
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRG-----------LIGVMHDWCEPFDTYPRTYDLLH 587 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erG-----------lig~~~~~ce~~~~yp~tyDlih 587 (666)
..|||+|||.|.++.+|++.+- ..+|+.+| ++.+++.+.++- -+.++....+..+.-+.+||+|.
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 31 KKVIDLGCGEGNLLSLLLKDKS---FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp CEEEEETCTTCHHHHHHHTSTT---CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred CEEEEecCCCCHHHHHHHhcCC---CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 4799999999999999999851 12566666 357777776651 23344433333332237999999
Q ss_pred eccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeChh----------------------HHHHHH----HHHHhcCcEE
Q 005981 588 AAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSID----------------------VMDELQ----EIGKAMGWHV 641 (666)
Q Consensus 588 a~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~----------------------~~~~~~----~i~~~l~W~~ 641 (666)
|..++.+..+. .+..+|.++.|+|||||.+++.+..+ ..+.++ .++++-.+++
T Consensus 108 ~~~~l~~~~~~-~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v 186 (219)
T 3jwg_A 108 VIEVIEHLDEN-RLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSV 186 (219)
T ss_dssp EESCGGGCCHH-HHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEE
T ss_pred EHHHHHhCCHH-HHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEE
Confidence 99999988532 34689999999999999888764332 123344 8888999998
Q ss_pred EEEeccCC---CCCceEEEEEEeC
Q 005981 642 TLRETAEG---PHASYRILTADKR 662 (666)
Q Consensus 642 ~~~~~~~~---~~~~e~~l~~~k~ 662 (666)
......++ -..+.+|.||+|.
T Consensus 187 ~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 187 RFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp EEEEESCCCTTSCCSEEEEEEEEC
T ss_pred EEEecCCccccCCCCeEEEEEecc
Confidence 87632222 2467899999985
No 111
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.10 E-value=1.7e-10 Score=116.70 Aligned_cols=103 Identities=18% Similarity=0.145 Sum_probs=74.3
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHH-----cCCC-ceEEeecccC-CC--CCCCCee
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE-----RGAP-AMVAAFATRR-LP--YPSQAFD 340 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~-----rg~~-~~~~~~d~e~-Lp--f~d~sFD 340 (666)
...+|||||||+|.++..|+.. +|+|+|+++.++..++.+.... .+.. ..+...|+.. ++ +++++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 3468999999999999998864 7999999999998776543321 2333 3455556655 66 7789999
Q ss_pred EEEecccccccccC--------hHHHHHHHHHhccCCeEEEEEEC
Q 005981 341 LIHCSRCRINWTRD--------DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 341 lVv~s~~l~h~~~d--------~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.|++... ..|... ...+++++.++|||||.|++.+.
T Consensus 126 ~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 126 KMFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 9986433 333211 14799999999999999999863
No 112
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.10 E-value=3.8e-10 Score=121.96 Aligned_cols=113 Identities=12% Similarity=0.146 Sum_probs=83.6
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR 331 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~ 331 (666)
.+.+.+.+.+.. .+..+|||||||+|.++..++++ +|+|+|++ .++..++ +.+...++. ..+...+++.
T Consensus 50 ~~~~~i~~~~~~----~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~-~~~~~~~~~~~v~~~~~d~~~ 123 (376)
T 3r0q_C 50 AYFNAVFQNKHH----FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHAR-ALVKANNLDHIVEVIEGSVED 123 (376)
T ss_dssp HHHHHHHTTTTT----TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHH-HHHHHTTCTTTEEEEESCGGG
T ss_pred HHHHHHHhcccc----CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHH-HHHHHcCCCCeEEEEECchhh
Confidence 345555544331 34579999999999999888875 89999999 8887775 445555654 3556667888
Q ss_pred CCCCCCCeeEEEecccccccc--cChHHHHHHHHHhccCCeEEEEEE
Q 005981 332 LPYPSQAFDLIHCSRCRINWT--RDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 332 Lpf~d~sFDlVv~s~~l~h~~--~d~~~~L~el~RvLkPGG~lv~st 376 (666)
++++ ++||+|+|..+.+... .....++.++.++|||||.++++.
T Consensus 124 ~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 124 ISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp CCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred cCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 8877 8999999855433332 446689999999999999998763
No 113
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.10 E-value=1.1e-10 Score=109.80 Aligned_cols=120 Identities=15% Similarity=0.134 Sum_probs=82.6
Q ss_pred cccHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecc
Q 005981 252 IHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFAT 329 (666)
Q Consensus 252 ~~g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~ 329 (666)
......+.+.+.+.+.... ....+|||+|||+|.++..++.. +|+|+|+++.++..++.+... .+....+...|.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~--~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~d~ 97 (171)
T 1ws6_A 21 RPSPVRLRKALFDYLRLRY--PRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRR-TGLGARVVALPV 97 (171)
T ss_dssp CCCCHHHHHHHHHHHHHHC--TTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHH-HTCCCEEECSCH
T ss_pred CCCHHHHHHHHHHHHHhhc--cCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHH-cCCceEEEeccH
Confidence 3445556666666654211 13478999999999999888865 799999999999888754443 343444444454
Q ss_pred cC-CC-C--CCCCeeEEEecccccccccChHHHHHHHH--HhccCCeEEEEEEC
Q 005981 330 RR-LP-Y--PSQAFDLIHCSRCRINWTRDDGILLLEVN--RMLRAGGYFAWAAQ 377 (666)
Q Consensus 330 e~-Lp-f--~d~sFDlVv~s~~l~h~~~d~~~~L~el~--RvLkPGG~lv~st~ 377 (666)
.. ++ + ..++||+|+++..++ .+...++..+. ++|||||.+++++.
T Consensus 98 ~~~~~~~~~~~~~~D~i~~~~~~~---~~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 98 EVFLPEAKAQGERFTVAFMAPPYA---MDLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCTT---SCTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred HHHHHhhhccCCceEEEEECCCCc---hhHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 33 22 1 134899999876533 44566777777 99999999999875
No 114
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.10 E-value=3.1e-10 Score=117.42 Aligned_cols=116 Identities=14% Similarity=0.093 Sum_probs=79.6
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCC---chhHHHhcc----CCeEEEeCCcchHHHHHHHHHHHcCCCceEEeecc
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGV---ASFGAYLLP----RNVITMSIAPKDVHENQIQFALERGAPAMVAAFAT 329 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGt---G~~a~~L~~----~~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~ 329 (666)
.+++++.+.+.. .....+|||||||+ |.++..+.. .+|+++|+|+.|+..++..... .....+...|+
T Consensus 63 ~~~~~~~~~l~~---~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~ 137 (274)
T 2qe6_A 63 KVLVRGVRFLAG---EAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADV 137 (274)
T ss_dssp HHHHHHHHHHHT---TTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCT
T ss_pred HHHHHHHHHHhh---ccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeC
Confidence 344444444431 12347999999999 987665532 3899999999999877654421 12234445554
Q ss_pred cCC-----------CCCCCCeeEEEecccccccccC-hHHHHHHHHHhccCCeEEEEEEC
Q 005981 330 RRL-----------PYPSQAFDLIHCSRCRINWTRD-DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 330 e~L-----------pf~d~sFDlVv~s~~l~h~~~d-~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.+. .++..+||+|+++.+++|+.++ ...+|+++.++|||||+|+++..
T Consensus 138 ~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 138 RDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp TCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 331 1233589999988887766432 67999999999999999999975
No 115
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.08 E-value=3.3e-10 Score=106.07 Aligned_cols=93 Identities=14% Similarity=0.130 Sum_probs=69.7
Q ss_pred CCCCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCC--------CCCCCe
Q 005981 273 HHIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP--------YPSQAF 339 (666)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lp--------f~d~sF 339 (666)
.+..+|||+|||+|.++..+++ .+++++|+++ ++.. ....+...+...++ +++++|
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLERVGDSKV 89 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHHHHTTCCE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhccCCCCce
Confidence 3457999999999988877754 3899999998 6521 12334445666655 667899
Q ss_pred eEEEecccccccccCh-----------HHHHHHHHHhccCCeEEEEEEC
Q 005981 340 DLIHCSRCRINWTRDD-----------GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 340 DlVv~s~~l~h~~~d~-----------~~~L~el~RvLkPGG~lv~st~ 377 (666)
|+|+++.. .++..+. ..++.++.++|+|||.+++++.
T Consensus 90 D~i~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 90 QVVMSDMA-PNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp EEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEECCC-ccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 99998766 4443444 6889999999999999999865
No 116
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.08 E-value=4.3e-11 Score=122.94 Aligned_cols=92 Identities=21% Similarity=0.162 Sum_probs=74.4
Q ss_pred eEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhccccccccccCCCCCCCCCccceEEeccccccCCCCC
Q 005981 521 NVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRGLIGVMHDWCEPFDTYPRTYDLLHAAGLFSVESKRC 599 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erGlig~~~~~ce~~~~yp~tyDliha~~~f~~~~~~c 599 (666)
.|||+|||+|.++..|++++. +|+.+| ++.|++.+.++.-+...+.-.|.++.-+++||+|.|..+|.+.
T Consensus 42 ~vLDvGcGtG~~~~~l~~~~~-----~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~---- 112 (257)
T 4hg2_A 42 DALDCGCGSGQASLGLAEFFE-----RVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWF---- 112 (257)
T ss_dssp EEEEESCTTTTTHHHHHTTCS-----EEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTC----
T ss_pred CEEEEcCCCCHHHHHHHHhCC-----EEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHh----
Confidence 599999999999999999987 566666 3577777766555667777777776434999999999888432
Q ss_pred CHHHHHHHhhhcccCCeEEEEE
Q 005981 600 NMSTIMLEMDRMLRPGGHVYIR 621 (666)
Q Consensus 600 ~~~~~l~E~dRiLRPgG~~ii~ 621 (666)
+.+.++.|+.|+|||||.|++-
T Consensus 113 ~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 113 DLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEE
T ss_pred hHHHHHHHHHHHcCCCCEEEEE
Confidence 4579999999999999999885
No 117
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.08 E-value=2.2e-10 Score=116.95 Aligned_cols=98 Identities=16% Similarity=0.154 Sum_probs=73.2
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEeccccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINW 351 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~ 351 (666)
+..+|||+|||+|.++..+++. +|+|+|+++.++..++.+ +...++...+...+... ++++++||+|+++... +
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n-~~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~~~-~- 195 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEAN-AKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLYA-E- 195 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHH-HHHTTCCCEEEESCHHH-HGGGCCEEEEEEECCH-H-
T ss_pred CCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHH-HHHcCCcEEEEECChhh-cCcCCCCCEEEECCcH-H-
Confidence 3479999999999998888765 899999999999887754 44455443343334333 1446789999986542 2
Q ss_pred ccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 352 TRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 352 ~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
....++.++.++|||||++++++.
T Consensus 196 --~~~~~l~~~~~~LkpgG~lils~~ 219 (254)
T 2nxc_A 196 --LHAALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp --HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --HHHHHHHHHHHHcCCCCEEEEEee
Confidence 246899999999999999999864
No 118
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.08 E-value=5.5e-10 Score=105.77 Aligned_cols=109 Identities=8% Similarity=0.061 Sum_probs=81.2
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCC
Q 005981 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRL 332 (666)
Q Consensus 256 ~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~L 332 (666)
....+.+.+.+.. .+..+|||+|||+|.++..++.. +|+++|+++.++..++... ...++. ..+...+...
T Consensus 21 ~~~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~~d~~~- 94 (183)
T 2yxd_A 21 EEIRAVSIGKLNL----NKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNL-AKFNIKNCQIIKGRAED- 94 (183)
T ss_dssp HHHHHHHHHHHCC----CTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHH-HHTTCCSEEEEESCHHH-
T ss_pred HHHHHHHHHHcCC----CCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHH-HHcCCCcEEEEECCccc-
Confidence 4455566665542 34579999999999999888765 8999999999988776543 344443 3344445444
Q ss_pred CCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 333 PYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 333 pf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++++++||+|+++.+ .+...+++++.++ |||.+++.+.
T Consensus 95 ~~~~~~~D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 95 VLDKLEFNKAFIGGT-----KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp HGGGCCCSEEEECSC-----SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred cccCCCCcEEEECCc-----ccHHHHHHHHhhC--CCCEEEEEec
Confidence 566689999998766 5678899999999 9999999864
No 119
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.08 E-value=3.5e-10 Score=115.40 Aligned_cols=97 Identities=16% Similarity=0.010 Sum_probs=74.6
Q ss_pred CCCeEEEECCCCchhHHHhcc----CCeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCCCC---CCCeeEEEec
Q 005981 274 HIRVVMDAGCGVASFGAYLLP----RNVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYP---SQAFDLIHCS 345 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~----~~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lpf~---d~sFDlVv~s 345 (666)
...+|||||||+|..+..|+. .+|+++|+++.++..++. .+...++. ..+...+++.++.. +++||+|+|.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVER-AIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHH-HHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 457999999999988777663 389999999999988764 44445554 34555566666543 4799999975
Q ss_pred ccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 346 RCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 346 ~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
.+ .+...++.++.++|||||.|++..
T Consensus 159 a~-----~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 159 AV-----APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp SS-----CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred Cc-----CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 43 466889999999999999998865
No 120
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.08 E-value=2.3e-10 Score=112.57 Aligned_cols=132 Identities=19% Similarity=0.281 Sum_probs=97.5
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhccc--cccccccCCCCCCCCCccceEEeccccccCC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRGL--IGVMHDWCEPFDTYPRTYDLLHAAGLFSVES 596 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erGl--ig~~~~~ce~~~~yp~tyDliha~~~f~~~~ 596 (666)
..|||+|||.|.++.+|++++. +|+.+|. +.+++.+.++.- +.+.....+.++ ++.+||+|.|..+|.+..
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~ 120 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLAGR-----TVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFE-VPTSIDTIVSTYAFHHLT 120 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHTTC-----EEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCC-CCSCCSEEEEESCGGGSC
T ss_pred CeEEEeCCCCCHHHHHHHhCCC-----eEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcC-CCCCeEEEEECcchhcCC
Confidence 4699999999999999999976 6677773 678888877732 445544444443 238999999999998876
Q ss_pred CCCCHHHHHHHhhhcccCCeEEEEEeCh----h---------------------------HHHHHHHHHHhcCcEEEEEe
Q 005981 597 KRCNMSTIMLEMDRMLRPGGHVYIRDSI----D---------------------------VMDELQEIGKAMGWHVTLRE 645 (666)
Q Consensus 597 ~~c~~~~~l~E~dRiLRPgG~~ii~d~~----~---------------------------~~~~~~~i~~~l~W~~~~~~ 645 (666)
+. ....+|.|+.|+|||||+++|.+.. . ..+.+++++++-.+++....
T Consensus 121 ~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~ 199 (220)
T 3hnr_A 121 DD-EKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTR 199 (220)
T ss_dssp HH-HHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred hH-HHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEee
Confidence 53 1124999999999999999998521 0 13678889999999887665
Q ss_pred ccCCCCCceEEEEEEeC
Q 005981 646 TAEGPHASYRILTADKR 662 (666)
Q Consensus 646 ~~~~~~~~e~~l~~~k~ 662 (666)
..+ -.-++.++|+
T Consensus 200 ~~~----~~w~~~~~~~ 212 (220)
T 3hnr_A 200 LNH----FVWVMEATKQ 212 (220)
T ss_dssp CSS----SEEEEEEEEC
T ss_pred ccc----eEEEEeehhh
Confidence 432 3456666664
No 121
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.07 E-value=1.1e-10 Score=114.63 Aligned_cols=99 Identities=9% Similarity=0.143 Sum_probs=75.8
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEeccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~ 349 (666)
...+|||+|||+|.++..++.. +|+++|+++.|+..++.+ +...|....+...+.... .+.++||+|++..++|
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~-~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~LH 126 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSI-IGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKMLP 126 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHH-HHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCHH
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHH-HHhcCCCccEEEeccccc-CCCCCcChhhHhhHHH
Confidence 3579999999999999998433 999999999999888754 555566633333333222 3568899999988877
Q ss_pred ccccChHHHHHHHHHhccCCeEEEEE
Q 005981 350 NWTRDDGILLLEVNRMLRAGGYFAWA 375 (666)
Q Consensus 350 h~~~d~~~~L~el~RvLkPGG~lv~s 375 (666)
++ ++.+..+.++.+.|||||+|+--
T Consensus 127 lL-~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 127 VL-KQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp HH-HHTTCCHHHHHHTCEEEEEEEEE
T ss_pred hh-hhhHHHHHHHHHHhCCCCEEEEe
Confidence 77 77777788999999999998554
No 122
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.07 E-value=9.2e-11 Score=111.78 Aligned_cols=118 Identities=13% Similarity=0.066 Sum_probs=78.9
Q ss_pred cHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeec
Q 005981 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFA 328 (666)
Q Consensus 254 g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d 328 (666)
..+...+.+.+.+... ....+|||+|||+|.++..++.. +|+|+|+++.++..++.+ +...++. ..+...|
T Consensus 14 ~~~~~~~~~~~~l~~~---~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~~~~~~~d 89 (177)
T 2esr_A 14 TSDKVRGAIFNMIGPY---FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDN-IIMTKAENRFTLLKME 89 (177)
T ss_dssp ----CHHHHHHHHCSC---CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHH-HHTTTCGGGEEEECSC
T ss_pred CHHHHHHHHHHHHHhh---cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHH-HHHcCCCCceEEEECc
Confidence 3344455666655422 24479999999999998888764 799999999998877643 3444443 2344445
Q ss_pred ccC-CCCCCCCeeEEEecccccccccChHHHHHHHH--HhccCCeEEEEEEC
Q 005981 329 TRR-LPYPSQAFDLIHCSRCRINWTRDDGILLLEVN--RMLRAGGYFAWAAQ 377 (666)
Q Consensus 329 ~e~-Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~--RvLkPGG~lv~st~ 377 (666)
+.. ++..+++||+|+++..+ +. ......+..+. ++|+|||.+++...
T Consensus 90 ~~~~~~~~~~~fD~i~~~~~~-~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 90 AERAIDCLTGRFDLVFLDPPY-AK-ETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp HHHHHHHBCSCEEEEEECCSS-HH-HHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHHhHHhhcCCCCEEEECCCC-Cc-chHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 444 33334679999987553 22 33456777776 99999999999864
No 123
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.07 E-value=4e-10 Score=109.84 Aligned_cols=130 Identities=18% Similarity=0.253 Sum_probs=93.2
Q ss_pred eEeeccccchHHHHHHhhC-CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCCCCCCCCccceEEeccc
Q 005981 521 NVLDMRAGFGGFAAALIEQ-KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEPFDTYPRTYDLLHAAGL 591 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~-~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~~~~yp~tyDliha~~~ 591 (666)
+|||+|||.|.++.+|+++ +. +|+.+|. +.+++.+.++ |+ +.+.+...+.++.-+.+||+|.+..+
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~~-----~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 120 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSDF-----SIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGS 120 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSEE-----EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESC
T ss_pred EEEEECCCCCHHHHHHHHcCCC-----eEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECch
Confidence 7999999999999999987 33 5666763 5777777666 43 44555555555422389999999999
Q ss_pred cccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh------------------------------hHHHHHHHHHHhcCcEE
Q 005981 592 FSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI------------------------------DVMDELQEIGKAMGWHV 641 (666)
Q Consensus 592 f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~------------------------------~~~~~~~~i~~~l~W~~ 641 (666)
+.+.. +...+|.|+.|+|||||.++|.+.. ...+.++++++.-.++.
T Consensus 121 l~~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 197 (219)
T 3dlc_A 121 VFFWE---DVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISS 197 (219)
T ss_dssp GGGCS---CHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSS
T ss_pred Hhhcc---CHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCe
Confidence 88874 4579999999999999999997521 12367888889989975
Q ss_pred EEEeccCCCCCceEEEEEEeC
Q 005981 642 TLRETAEGPHASYRILTADKR 662 (666)
Q Consensus 642 ~~~~~~~~~~~~e~~l~~~k~ 662 (666)
.....++ ....+++.|+
T Consensus 198 v~~~~~~----~~~~~~~~k~ 214 (219)
T 3dlc_A 198 YEIILGD----EGFWIIISKT 214 (219)
T ss_dssp EEEEEET----TEEEEEEBCC
T ss_pred EEEEecC----CceEEEEecc
Confidence 4333222 1345555553
No 124
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.07 E-value=1.1e-09 Score=104.29 Aligned_cols=111 Identities=15% Similarity=0.195 Sum_probs=79.3
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCC--CceEEeecccCC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRL 332 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~--~~~~~~~d~e~L 332 (666)
.....+.+.+.. .+..+|||+|||+|.++..++.. +|+++|+++.++..++.+.. ..+. ...+...+...
T Consensus 20 ~~~~~~~~~~~~----~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~-~~~~~~~~~~~~~d~~~- 93 (192)
T 1l3i_A 20 EVRCLIMCLAEP----GKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQ-RHGLGDNVTLMEGDAPE- 93 (192)
T ss_dssp HHHHHHHHHHCC----CTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHH-HTTCCTTEEEEESCHHH-
T ss_pred HHHHHHHHhcCC----CCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHH-HcCCCcceEEEecCHHH-
Confidence 344455555431 34579999999999999888876 89999999998887765433 3444 22334444333
Q ss_pred CCCC-CCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 333 PYPS-QAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 333 pf~d-~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++. ++||+|++...+. +...++.++.++|+|||.+++...
T Consensus 94 ~~~~~~~~D~v~~~~~~~----~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 94 ALCKIPDIDIAVVGGSGG----ELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp HHTTSCCEEEEEESCCTT----CHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred hcccCCCCCEEEECCchH----HHHHHHHHHHHhcCCCcEEEEEec
Confidence 2232 5899999876543 458899999999999999999864
No 125
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.07 E-value=1e-10 Score=117.60 Aligned_cols=102 Identities=16% Similarity=0.087 Sum_probs=68.6
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCC-cchHHHH---HHHHHHHcCCC-ceEEeecccCCCCC-CCCeeEEE
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIA-PKDVHEN---QIQFALERGAP-AMVAAFATRRLPYP-SQAFDLIH 343 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS-~~~l~~a---~~~~a~~rg~~-~~~~~~d~e~Lpf~-d~sFDlVv 343 (666)
+..+|||||||+|.++..|+.+ +|+|+|+| +.|+..| + +.+.+.++. ..+...+++.+|.. .+.+|.|+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~-~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKII-KKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHT-SCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH-HHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 4478999999999999998833 79999999 6666544 2 122334544 34555677777632 25566666
Q ss_pred ecccc----cccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 344 CSRCR----INWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 344 ~s~~l----~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
++... .++..+...+|++++|+|||||.+++..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 44321 1222334578999999999999999953
No 126
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.06 E-value=1.6e-10 Score=117.16 Aligned_cols=113 Identities=12% Similarity=0.110 Sum_probs=78.9
Q ss_pred HHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeec---c
Q 005981 258 YLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAPAMVAAFA---T 329 (666)
Q Consensus 258 ~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d---~ 329 (666)
....|+.-+..+ .-+++.+|||+|||+|.++.++++. .|+|+|+++.|+..+.. .+.+++ .......+ .
T Consensus 62 laa~i~~gl~~l-~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~-~a~~~~-ni~~V~~d~~~p 138 (233)
T 4df3_A 62 LAAALLKGLIEL-PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLT-VVRDRR-NIFPILGDARFP 138 (233)
T ss_dssp HHHHHHTTCSCC-CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHH-HSTTCT-TEEEEESCTTCG
T ss_pred HHHHHHhchhhc-CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHH-hhHhhc-CeeEEEEeccCc
Confidence 344555555433 2256789999999999999999864 79999999999977653 333332 11122222 3
Q ss_pred cCCCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 330 RRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 330 e~Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
+..++..+++|+|++... ++ .+...++.++.|+|||||.++++.
T Consensus 139 ~~~~~~~~~vDvVf~d~~-~~--~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 139 EKYRHLVEGVDGLYADVA-QP--EQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp GGGTTTCCCEEEEEECCC-CT--THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccccceEEEEEEecc-CC--hhHHHHHHHHHHhccCCCEEEEEE
Confidence 445667789999986422 32 456789999999999999999974
No 127
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.06 E-value=4.7e-10 Score=130.64 Aligned_cols=120 Identities=15% Similarity=0.159 Sum_probs=75.2
Q ss_pred eEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc----cccccccCCC-CCCCCCccceEEecc
Q 005981 521 NVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL----IGVMHDWCEP-FDTYPRTYDLLHAAG 590 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl----ig~~~~~ce~-~~~yp~tyDliha~~ 590 (666)
.|||+|||+|+|+.+++..|.. .|+.+|. +.+++.+.++ |+ +.+++.-+.. +.....+||+|.++-
T Consensus 542 ~VLDlg~GtG~~sl~aa~~ga~----~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 542 DFLNLFSYTGSATVHAGLGGAR----STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp EEEEESCTTCHHHHHHHHTTCS----EEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred cEEEeeechhHHHHHHHHCCCC----EEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 5999999999999999988762 3666663 5667666553 43 2333333222 122247999999864
Q ss_pred c-cccCCC-------CCCHHHHHHHhhhcccCCeEEEEEeChhHHHHHHHHHHhcCcEEEEE
Q 005981 591 L-FSVESK-------RCNMSTIMLEMDRMLRPGGHVYIRDSIDVMDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 591 ~-f~~~~~-------~c~~~~~l~E~dRiLRPgG~~ii~d~~~~~~~~~~i~~~l~W~~~~~ 644 (666)
- |..... ......++.++-|+|+|||+++++-.......-.+.+....++....
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~~~g~~~~~i 679 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEI 679 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHHHTTEEEEEC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHHHcCCceeee
Confidence 2 222111 12345789999999999999999865432222245556667765443
No 128
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.06 E-value=7.2e-10 Score=110.19 Aligned_cols=156 Identities=13% Similarity=0.113 Sum_probs=107.2
Q ss_pred hHhHHHHHHHHHHhcccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc-cccccc
Q 005981 498 SKYWNEIIESYVRALHWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL-IGVMHD 571 (666)
Q Consensus 498 ~~~w~~~v~~Y~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl-ig~~~~ 571 (666)
.+.|.+.+..+...... .-..|||+|||.|.++..|++.+. +|+.+|. +.+++.+.++ |+ +.+.+.
T Consensus 20 ~~~~~~~~~~~l~~~~~---~~~~vLdiG~G~G~~~~~l~~~~~-----~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~ 91 (246)
T 1y8c_A 20 YKKWSDFIIEKCVENNL---VFDDYLDLACGTGNLTENLCPKFK-----NTWAVDLSQEMLSEAENKFRSQGLKPRLACQ 91 (246)
T ss_dssp HHHHHHHHHHHHHTTTC---CTTEEEEETCTTSTTHHHHGGGSS-----EEEEECSCHHHHHHHHHHHHHTTCCCEEECC
T ss_pred HHHHHHHHHHHHHHhCC---CCCeEEEeCCCCCHHHHHHHHCCC-----cEEEEECCHHHHHHHHHHHhhcCCCeEEEec
Confidence 34455555555433211 223699999999999999999976 5666774 5777777665 32 344444
Q ss_pred cCCCCCCCCCccceEEecc-ccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC---------------------------
Q 005981 572 WCEPFDTYPRTYDLLHAAG-LFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS--------------------------- 623 (666)
Q Consensus 572 ~ce~~~~yp~tyDliha~~-~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~--------------------------- 623 (666)
-.+.++ ++.+||+|.+.. +|.+..+.-+...+|.++.|+|||||.+++.-.
T Consensus 92 d~~~~~-~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (246)
T 1y8c_A 92 DISNLN-INRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWEN 170 (246)
T ss_dssp CGGGCC-CSCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEE
T ss_pred ccccCC-ccCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEec
Confidence 333333 358999999998 998875444567999999999999999998410
Q ss_pred -------------------------------hhHHHHHHHHHHhcCcEEEEEeccC-----CCCCceEEEEEEeC
Q 005981 624 -------------------------------IDVMDELQEIGKAMGWHVTLRETAE-----GPHASYRILTADKR 662 (666)
Q Consensus 624 -------------------------------~~~~~~~~~i~~~l~W~~~~~~~~~-----~~~~~e~~l~~~k~ 662 (666)
.-..+.+++++++-.+++....... +.....-+++|+|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK~ 245 (246)
T 1y8c_A 171 QFEDDLVSMYISFFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKLG 245 (246)
T ss_dssp EEETTEEEEEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEEC
T ss_pred ccCCceEEEEEEEEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEec
Confidence 0046889999999999876553221 22345668889985
No 129
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.06 E-value=7.1e-11 Score=125.81 Aligned_cols=112 Identities=17% Similarity=0.205 Sum_probs=81.3
Q ss_pred HHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCC
Q 005981 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY 334 (666)
Q Consensus 259 i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf 334 (666)
.+.+.+.+.. ....+|||+|||+|.++..+++. +|+++|+++.++..++.+. ...++...+...|... +
T Consensus 185 ~~~ll~~l~~----~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~-~~~~~~~~~~~~d~~~--~ 257 (343)
T 2pjd_A 185 SQLLLSTLTP----HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATL-AANGVEGEVFASNVFS--E 257 (343)
T ss_dssp HHHHHHHSCT----TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHH-HHTTCCCEEEECSTTT--T
T ss_pred HHHHHHhcCc----CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HHhCCCCEEEEccccc--c
Confidence 4455555532 22468999999999998888643 8999999999998877544 3455554454444433 3
Q ss_pred CCCCeeEEEeccccccc----ccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 335 PSQAFDLIHCSRCRINW----TRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 335 ~d~sFDlVv~s~~l~h~----~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.+++||+|+|+..+++. ..+...+++++.++|||||.+++...
T Consensus 258 ~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 258 VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 46899999998775531 13456899999999999999999864
No 130
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.05 E-value=2.3e-10 Score=112.82 Aligned_cols=101 Identities=19% Similarity=0.162 Sum_probs=74.3
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHH----HcCCC-ceEEeecccCCCCCCCCeeEEEe
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFAL----ERGAP-AMVAAFATRRLPYPSQAFDLIHC 344 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~----~rg~~-~~~~~~d~e~Lpf~d~sFDlVv~ 344 (666)
+..+|||||||+|.++..|++. +|+|+|+++.|+..+.. .++ ..+.. ..+...|++.+++++++ |.|+.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~-~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISA-KAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHH-HHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEE
Confidence 4478999999999999888764 89999999999875432 222 23443 35566678889988777 77763
Q ss_pred ccc---cc-ccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 345 SRC---RI-NWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 345 s~~---l~-h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
... .+ |+..++..+++++.|+|||||.++++.
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 221 11 233667899999999999999999974
No 131
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.05 E-value=4e-10 Score=111.92 Aligned_cols=155 Identities=12% Similarity=0.082 Sum_probs=106.2
Q ss_pred HhHHHHHHHHHHhcccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhccc-cccccccCCCC
Q 005981 499 KYWNEIIESYVRALHWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRGL-IGVMHDWCEPF 576 (666)
Q Consensus 499 ~~w~~~v~~Y~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erGl-ig~~~~~ce~~ 576 (666)
..|......+.+.+.-....-..|||+|||.|.++..|++.+. +|+.+|. +.+++.+.++.- +.+.+...+.+
T Consensus 21 ~~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-----~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~ 95 (239)
T 3bxo_A 21 KDYAAEASDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEFG-----DTAGLELSEDMLTHARKRLPDATLHQGDMRDF 95 (239)
T ss_dssp CCHHHHHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHS-----EEEEEESCHHHHHHHHHHCTTCEEEECCTTTC
T ss_pred hhHHHHHHHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCC-----cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHc
Confidence 4455554444433321002235699999999999999999864 5666663 678888877732 44444444444
Q ss_pred CCCCCccceEEe-ccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh-------------------------------
Q 005981 577 DTYPRTYDLLHA-AGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI------------------------------- 624 (666)
Q Consensus 577 ~~yp~tyDliha-~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~------------------------------- 624 (666)
+. +.+||+|.| .+++.+..+.-+...+|.++.|+|||||++++.+..
T Consensus 96 ~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (239)
T 3bxo_A 96 RL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVRE 174 (239)
T ss_dssp CC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEE
T ss_pred cc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecC
Confidence 43 689999996 447877755445679999999999999999996310
Q ss_pred ------------------------------hHHHHHHHHHHhcCcEEEEEeccCCCCCceEEEEEEeC
Q 005981 625 ------------------------------DVMDELQEIGKAMGWHVTLRETAEGPHASYRILTADKR 662 (666)
Q Consensus 625 ------------------------------~~~~~~~~i~~~l~W~~~~~~~~~~~~~~e~~l~~~k~ 662 (666)
-..++++.+++.-.+++...... .....+++|+|+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~---~~~~~~~va~K~ 239 (239)
T 3bxo_A 175 GNATRMEVHFTVADPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGG---PSGRGLFVGVPA 239 (239)
T ss_dssp TTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESST---TTSSCEEEEEEC
T ss_pred CCEEEEEEEEEEecCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcC---CCCceEEEEecC
Confidence 02488999999999976655432 234678899885
No 132
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.05 E-value=1.6e-10 Score=125.03 Aligned_cols=113 Identities=15% Similarity=0.207 Sum_probs=79.6
Q ss_pred HHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCC----ceEEeeccc
Q 005981 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP----AMVAAFATR 330 (666)
Q Consensus 259 i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~----~~~~~~d~e 330 (666)
.+.+.+.+.. ....+|||+|||+|.++..++.. +|+++|+++.++..++.+. ...++. ..+...|..
T Consensus 211 ~~~ll~~l~~----~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~-~~ngl~~~~~v~~~~~D~~ 285 (375)
T 4dcm_A 211 ARFFMQHLPE----NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNV-ETNMPEALDRCEFMINNAL 285 (375)
T ss_dssp HHHHHHTCCC----SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHH-HHHCGGGGGGEEEEECSTT
T ss_pred HHHHHHhCcc----cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHH-HHcCCCcCceEEEEechhh
Confidence 3445666653 23379999999999999888754 7999999999998877544 334432 233444544
Q ss_pred CCCCCCCCeeEEEeccccccc--c-cC-hHHHHHHHHHhccCCeEEEEEEC
Q 005981 331 RLPYPSQAFDLIHCSRCRINW--T-RD-DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 331 ~Lpf~d~sFDlVv~s~~l~h~--~-~d-~~~~L~el~RvLkPGG~lv~st~ 377 (666)
. ++++++||+|+|+..+++. . .. ...+++++.++|||||.++++..
T Consensus 286 ~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 286 S-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp T-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 4 4567899999998775542 1 11 13689999999999999999864
No 133
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.04 E-value=1.8e-10 Score=125.37 Aligned_cols=120 Identities=10% Similarity=-0.012 Sum_probs=86.6
Q ss_pred ccccHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHH------HHHcCC
Q 005981 251 FIHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQF------ALERGA 320 (666)
Q Consensus 251 F~~g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~------a~~rg~ 320 (666)
|.......+..+++.+.. .+..+|||||||+|.++..++.. +|+|||+++.++..|+... +...|+
T Consensus 154 YGEt~~~~i~~il~~l~l----~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl 229 (438)
T 3uwp_A 154 YGETSFDLVAQMIDEIKM----TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGK 229 (438)
T ss_dssp GGGTHHHHHHHHHHHHCC----CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTB
T ss_pred cCCCCHHHHHHHHHhcCC----CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 334445566677766642 45579999999999988877642 5999999998887765432 223343
Q ss_pred ---CceEEeecccCCCCCC--CCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 321 ---PAMVAAFATRRLPYPS--QAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 321 ---~~~~~~~d~e~Lpf~d--~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
...+...|+..+++.+ ..||+|+++.. +++ ++....|.++.|+|||||.|+++.
T Consensus 230 ~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~-~F~-pdl~~aL~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 230 KHAEYTLERGDFLSEEWRERIANTSVIFVNNF-AFG-PEVDHQLKERFANMKEGGRIVSSK 288 (438)
T ss_dssp CCCEEEEEECCTTSHHHHHHHHTCSEEEECCT-TCC-HHHHHHHHHHHTTSCTTCEEEESS
T ss_pred CCCCeEEEECcccCCccccccCCccEEEEccc-ccC-chHHHHHHHHHHcCCCCcEEEEee
Confidence 2345566777777654 47999998765 344 677889999999999999998874
No 134
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.04 E-value=2.7e-10 Score=112.08 Aligned_cols=131 Identities=11% Similarity=0.025 Sum_probs=90.2
Q ss_pred HHHHhcccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhcc------------------ccc
Q 005981 507 SYVRALHWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRG------------------LIG 567 (666)
Q Consensus 507 ~Y~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erG------------------lig 567 (666)
.|...+.+..+ ..|||+|||.|.++.+|+++|+ .|+.+| ++.+++.+.+|. -+.
T Consensus 13 ~~~~~l~~~~~--~~vLD~GCG~G~~~~~la~~g~-----~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~ 85 (203)
T 1pjz_A 13 QYWSSLNVVPG--ARVLVPLCGKSQDMSWLSGQGY-----HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIE 85 (203)
T ss_dssp HHHHHHCCCTT--CEEEETTTCCSHHHHHHHHHCC-----EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSE
T ss_pred HHHHhcccCCC--CEEEEeCCCCcHhHHHHHHCCC-----eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccE
Confidence 34444554444 3599999999999999999987 677777 568898888761 133
Q ss_pred cccccCCCCCCCC-CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeE-EEEE-eCh----------hHHHHHHHHH
Q 005981 568 VMHDWCEPFDTYP-RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGH-VYIR-DSI----------DVMDELQEIG 634 (666)
Q Consensus 568 ~~~~~ce~~~~yp-~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~-~ii~-d~~----------~~~~~~~~i~ 634 (666)
+++...+.++..+ .+||+|.+..+|.+... .+...++.||.|+|||||+ +++. +.. -..+++++++
T Consensus 86 ~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~-~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~ 164 (203)
T 1pjz_A 86 IWCGDFFALTARDIGHCAAFYDRAAMIALPA-DMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVM 164 (203)
T ss_dssp EEEECCSSSTHHHHHSEEEEEEESCGGGSCH-HHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTS
T ss_pred EEECccccCCcccCCCEEEEEECcchhhCCH-HHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHh
Confidence 4444433333222 68999999888877652 2345789999999999998 3333 211 1257788888
Q ss_pred HhcCcEEEEEec
Q 005981 635 KAMGWHVTLRET 646 (666)
Q Consensus 635 ~~l~W~~~~~~~ 646 (666)
.. .|++.....
T Consensus 165 ~~-gf~i~~~~~ 175 (203)
T 1pjz_A 165 SG-NWEVTKVGG 175 (203)
T ss_dssp CS-SEEEEEEEE
T ss_pred cC-CcEEEEecc
Confidence 87 888765443
No 135
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.04 E-value=6.1e-10 Score=108.58 Aligned_cols=95 Identities=14% Similarity=0.024 Sum_probs=73.2
Q ss_pred CCeEEEECCCCchhHHHhcc----CCeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCCCCCCCeeEEEeccccc
Q 005981 275 IRVVMDAGCGVASFGAYLLP----RNVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~----~~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lpf~d~sFDlVv~s~~l~ 349 (666)
..+|||+|||+|.++..++. .+|+++|+++.++..++.. +...+.. ..+...+...++ +.++||+|++...
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~-- 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQV-QHELKLENIEPVQSRVEEFP-SEPPFDGVISRAF-- 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHH-HHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCS--
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH-HHHcCCCCeEEEecchhhCC-ccCCcCEEEEecc--
Confidence 46899999999998888764 3899999999988777643 3444544 344555666655 4578999996532
Q ss_pred ccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 350 NWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 350 h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
.+...++.++.++|+|||.+++..
T Consensus 142 ---~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 142 ---ASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp ---SSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred ---CCHHHHHHHHHHhcCCCcEEEEEe
Confidence 556799999999999999999985
No 136
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.04 E-value=7.8e-10 Score=115.65 Aligned_cols=97 Identities=12% Similarity=0.182 Sum_probs=68.5
Q ss_pred CCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCCceE-EeecccCCC---CCCCCeeEEEecc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMV-AAFATRRLP---YPSQAFDLIHCSR 346 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~~~~-~~~d~e~Lp---f~d~sFDlVv~s~ 346 (666)
.+.+|||||||||.++..|++. +|+|+|+++.|++.+.. ....... ...++..+. ++..+||+|+|..
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r-----~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~ 159 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLR-----QDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDV 159 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHH-----TCTTEEEECSCCGGGCCGGGCTTCCCSEEEECC
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHH-----hCcccceecccCceecchhhCCCCCCCEEEEEe
Confidence 4579999999999999888765 79999999999865422 1111111 111222222 3345699999876
Q ss_pred cccccccChHHHHHHHHHhccCCeEEEEEECCC
Q 005981 347 CRINWTRDDGILLLEVNRMLRAGGYFAWAAQPV 379 (666)
Q Consensus 347 ~l~h~~~d~~~~L~el~RvLkPGG~lv~st~P~ 379 (666)
++++ ...+|.++.|+|||||.+++...|.
T Consensus 160 sf~s----l~~vL~e~~rvLkpGG~lv~lvkPq 188 (291)
T 3hp7_A 160 SFIS----LNLILPALAKILVDGGQVVALVKPQ 188 (291)
T ss_dssp SSSC----GGGTHHHHHHHSCTTCEEEEEECGG
T ss_pred eHhh----HHHHHHHHHHHcCcCCEEEEEECcc
Confidence 6443 4789999999999999999985543
No 137
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.04 E-value=6.2e-10 Score=115.17 Aligned_cols=115 Identities=12% Similarity=0.067 Sum_probs=83.9
Q ss_pred cccccHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCCc--eE
Q 005981 250 QFIHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPA--MV 324 (666)
Q Consensus 250 ~F~~g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~~--~~ 324 (666)
.|..........+.+.+. ++.+|||+|||+|.++..++.. +|+|+|+++.++..++. .+...++.. .+
T Consensus 107 ~f~~~~~~~~~~l~~~~~------~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~-n~~~n~~~~~v~~ 179 (278)
T 2frn_A 107 MFSPANVKERVRMAKVAK------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVE-NIHLNKVEDRMSA 179 (278)
T ss_dssp CCCGGGHHHHHHHHHHCC------TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHH-HHHHTTCTTTEEE
T ss_pred eEcCCcHHHHHHHHHhCC------CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEE
Confidence 344444444455555543 3479999999999999888764 59999999999988774 444556543 35
Q ss_pred EeecccCCCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 325 AAFATRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 325 ~~~d~e~Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
...|+..++. +++||+|++... .....++.++.++|||||.+++.+.
T Consensus 180 ~~~D~~~~~~-~~~fD~Vi~~~p-----~~~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 180 YNMDNRDFPG-ENIADRILMGYV-----VRTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp ECSCTTTCCC-CSCEEEEEECCC-----SSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred EECCHHHhcc-cCCccEEEECCc-----hhHHHHHHHHHHHCCCCeEEEEEEe
Confidence 5566777665 689999997533 3446789999999999999999864
No 138
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.04 E-value=5.1e-10 Score=112.81 Aligned_cols=118 Identities=19% Similarity=0.196 Sum_probs=88.5
Q ss_pred eeEeeccccchHHHHHHhhC-CCceEEEEeeccC-CCCChhHHHhcc----ccccccccCCCCCCCCCccceEEeccccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQ-KFDCWVMNVVPVS-GFNTLPVIYDRG----LIGVMHDWCEPFDTYPRTYDLLHAAGLFS 593 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~-~~~vwvmnv~~~~-~~~~l~~~~erG----lig~~~~~ce~~~~yp~tyDliha~~~f~ 593 (666)
.+|||+|||.|.++.+|+++ ++ +|+.+| ++.+++.+.++. -+.+.+.-.+.++.-+.+||+|++.+++.
T Consensus 57 ~~vLdiG~G~G~~~~~l~~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 131 (266)
T 3ujc_A 57 SKVLDIGSGLGGGCMYINEKYGA-----HTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAIL 131 (266)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCC-----EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGG
T ss_pred CEEEEECCCCCHHHHHHHHHcCC-----EEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHH
Confidence 46999999999999999997 66 566666 367888888874 24445444444432248999999999998
Q ss_pred cCCCCCCHHHHHHHhhhcccCCeEEEEEeCh----------------------hHHHHHHHHHHhcCcEEEE
Q 005981 594 VESKRCNMSTIMLEMDRMLRPGGHVYIRDSI----------------------DVMDELQEIGKAMGWHVTL 643 (666)
Q Consensus 594 ~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~----------------------~~~~~~~~i~~~l~W~~~~ 643 (666)
+... -+...+|.|+.|+|||||++++.+.. -..+.+.++++...++...
T Consensus 132 ~~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 202 (266)
T 3ujc_A 132 ALSL-ENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVV 202 (266)
T ss_dssp GSCH-HHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred hcCh-HHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEE
Confidence 8732 24579999999999999999998521 1246677888888887654
No 139
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.03 E-value=8.3e-10 Score=117.92 Aligned_cols=112 Identities=13% Similarity=0.202 Sum_probs=83.4
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR 331 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~ 331 (666)
.|.+.+.+.+.. .+..+|||||||+|.++..+++. +|+|+|+++ ++..++ +..+..++. ..+...+.+.
T Consensus 37 ~y~~~i~~~l~~----~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~-~~~~~~~l~~~v~~~~~d~~~ 110 (348)
T 2y1w_A 37 TYQRAILQNHTD----FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAE-VLVKSNNLTDRIVVIPGKVEE 110 (348)
T ss_dssp HHHHHHHHTGGG----TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH-HHHHHTTCTTTEEEEESCTTT
T ss_pred HHHHHHHhcccc----CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHH-HHHHHcCCCCcEEEEEcchhh
Confidence 466666666643 34579999999999999888765 899999996 776554 344445542 3455556777
Q ss_pred CCCCCCCeeEEEeccccccccc-ChHHHHHHHHHhccCCeEEEEE
Q 005981 332 LPYPSQAFDLIHCSRCRINWTR-DDGILLLEVNRMLRAGGYFAWA 375 (666)
Q Consensus 332 Lpf~d~sFDlVv~s~~l~h~~~-d~~~~L~el~RvLkPGG~lv~s 375 (666)
++++ ++||+|++..+.+|+.. +....+.++.++|||||.+++.
T Consensus 111 ~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 111 VSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 7765 68999999877777753 3457888999999999999865
No 140
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.03 E-value=5.4e-10 Score=111.05 Aligned_cols=108 Identities=11% Similarity=0.049 Sum_probs=77.8
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY 334 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf 334 (666)
...+.+.+.+.. .+..+|||||||+|.++..+++. +|+++|+++.++..++.... ..+ ...+...+......
T Consensus 57 ~~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~-~~~-~v~~~~~d~~~~~~ 130 (231)
T 1vbf_A 57 NLGIFMLDELDL----HKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLS-YYN-NIKLILGDGTLGYE 130 (231)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHT-TCS-SEEEEESCGGGCCG
T ss_pred HHHHHHHHhcCC----CCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHh-hcC-CeEEEECCcccccc
Confidence 445566665542 34579999999999999888765 89999999998877654332 223 33444455554222
Q ss_pred CCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 335 PSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 335 ~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.+++||+|++..+++|+. .++.++|||||.+++...
T Consensus 131 ~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 131 EEKPYDRVVVWATAPTLL-------CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp GGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEEC
T ss_pred cCCCccEEEECCcHHHHH-------HHHHHHcCCCcEEEEEEc
Confidence 467899999988877663 478999999999999964
No 141
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.03 E-value=6.7e-10 Score=117.19 Aligned_cols=99 Identities=18% Similarity=0.194 Sum_probs=76.5
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCCCCCCCCeeEEEeccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSRC 347 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~Lpf~d~sFDlVv~s~~ 347 (666)
...+|||||||+|.++..++++ +++++|+ +.++..++.... +.++. ..+...|.. .+++. +||+|++.++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~-~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 244 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFL-DTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAV 244 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHH-HTTCTTTEEEEECCTT-SCCCC-SCSEEEEESC
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhh-hcCcCcCeEEecCCCC-CCCCC-CCcEEEEehh
Confidence 3579999999999999888753 7999999 888877764433 34432 344455554 35554 8999999999
Q ss_pred ccccccCh--HHHHHHHHHhccCCeEEEEEEC
Q 005981 348 RINWTRDD--GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 348 l~h~~~d~--~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++| ++. ..+|++++++|||||++++.+.
T Consensus 245 lh~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 245 LHDW-DDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp GGGS-CHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred hccC-CHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 8888 443 6899999999999999999875
No 142
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.03 E-value=9.6e-10 Score=119.20 Aligned_cols=111 Identities=22% Similarity=0.266 Sum_probs=76.5
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc-cccccccCCCCCCCCCccceEEeccccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL-IGVMHDWCEPFDTYPRTYDLLHAAGLFS 593 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl-ig~~~~~ce~~~~yp~tyDliha~~~f~ 593 (666)
.+|||+|||+|.++.+|++.+. .|+.+|. +.+++.+.++ |+ +.+++..++....-..+||+|.++..|.
T Consensus 235 ~~VLDlGcG~G~~~~~la~~g~-----~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 235 RQVLDLGAGYGALTLPLARMGA-----EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFH 309 (381)
T ss_dssp CEEEEETCTTSTTHHHHHHTTC-----EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCC
T ss_pred CEEEEEeeeCCHHHHHHHHcCC-----EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchh
Confidence 4699999999999999999976 5555553 4566555443 43 4555555444432237999999998887
Q ss_pred cCCC--CCCHHHHHHHhhhcccCCeEEEEEeCh--hHHHHHHHHHH
Q 005981 594 VESK--RCNMSTIMLEMDRMLRPGGHVYIRDSI--DVMDELQEIGK 635 (666)
Q Consensus 594 ~~~~--~c~~~~~l~E~dRiLRPgG~~ii~d~~--~~~~~~~~i~~ 635 (666)
+... .-....++.++.|+|||||.++|.... .....+++...
T Consensus 310 ~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~ 355 (381)
T 3dmg_A 310 VGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFG 355 (381)
T ss_dssp TTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHS
T ss_pred hcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhc
Confidence 6432 223468999999999999999997433 23444555443
No 143
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.03 E-value=4.4e-10 Score=110.47 Aligned_cols=141 Identities=18% Similarity=0.092 Sum_probs=99.8
Q ss_pred HHhcccCCCceeeEeeccccchHHHHHHhhCC---CceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCCC
Q 005981 509 VRALHWKKMKLRNVLDMRAGFGGFAAALIEQK---FDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFDT 578 (666)
Q Consensus 509 ~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~---~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~~ 578 (666)
.+.+++..+ ..|||+|||.|.++.+|++.+ . .|+.+|. +.+++.+.++ |+ +.+...-.+.++.
T Consensus 30 ~~~~~~~~~--~~vLDiG~G~G~~~~~l~~~~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~ 102 (219)
T 3dh0_A 30 LKEFGLKEG--MTVLDVGTGAGFYLPYLSKMVGEKG-----KVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPL 102 (219)
T ss_dssp HHHHTCCTT--CEEEESSCTTCTTHHHHHHHHTTTC-----EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSS
T ss_pred HHHhCCCCC--CEEEEEecCCCHHHHHHHHHhCCCc-----EEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCC
Confidence 344454444 369999999999999999874 4 4555663 5667666555 33 4444444444442
Q ss_pred CCCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh-------------hHHHHHHHHHHhcCcEEEEEe
Q 005981 579 YPRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI-------------DVMDELQEIGKAMGWHVTLRE 645 (666)
Q Consensus 579 yp~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~-------------~~~~~~~~i~~~l~W~~~~~~ 645 (666)
-+.+||+|.+..++.+..+ ...+|.|+.|+|||||++++.+.. -..+.++.+++...|+.....
T Consensus 103 ~~~~fD~v~~~~~l~~~~~---~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 179 (219)
T 3dh0_A 103 PDNTVDFIFMAFTFHELSE---PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVV 179 (219)
T ss_dssp CSSCEEEEEEESCGGGCSS---HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCeeEEEeehhhhhcCC---HHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEE
Confidence 2389999999999988754 479999999999999999998521 126889999999999976543
Q ss_pred ccCCCCCceEEEEEEeC
Q 005981 646 TAEGPHASYRILTADKR 662 (666)
Q Consensus 646 ~~~~~~~~e~~l~~~k~ 662 (666)
.-. ....+++++|+
T Consensus 180 ~~~---~~~~~~~~~k~ 193 (219)
T 3dh0_A 180 EVG---KYCFGVYAMIV 193 (219)
T ss_dssp EET---TTEEEEEEECC
T ss_pred eeC---CceEEEEEEec
Confidence 322 24677788774
No 144
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.02 E-value=3.6e-10 Score=112.29 Aligned_cols=115 Identities=21% Similarity=0.296 Sum_probs=87.7
Q ss_pred eEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhcc--ccccccccCCCCCCCCCccceEEeccccccCCC
Q 005981 521 NVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRG--LIGVMHDWCEPFDTYPRTYDLLHAAGLFSVESK 597 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erG--lig~~~~~ce~~~~yp~tyDliha~~~f~~~~~ 597 (666)
.|||+|||.|.++..|++.+. +|+.+| ++.+++.+.++. -+.+.+...+.+ ..+.+||+|+|.+++.|..+
T Consensus 45 ~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~ 118 (250)
T 2p7i_A 45 NLLELGSFKGDFTSRLQEHFN-----DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHIDD 118 (250)
T ss_dssp CEEEESCTTSHHHHHHTTTCS-----CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCSS
T ss_pred cEEEECCCCCHHHHHHHHhCC-----cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhcC
Confidence 599999999999999999976 566666 357888887773 234444444444 23589999999999998865
Q ss_pred CCCHHHHHHHhh-hcccCCeEEEEEeChh---------------------------------HHHHHHHHHHhcCcEEEE
Q 005981 598 RCNMSTIMLEMD-RMLRPGGHVYIRDSID---------------------------------VMDELQEIGKAMGWHVTL 643 (666)
Q Consensus 598 ~c~~~~~l~E~d-RiLRPgG~~ii~d~~~---------------------------------~~~~~~~i~~~l~W~~~~ 643 (666)
. ..+|.|+. |+|||||+++|.+... ..+.++++++...+++..
T Consensus 119 ~---~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 195 (250)
T 2p7i_A 119 P---VALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTY 195 (250)
T ss_dssp H---HHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEE
T ss_pred H---HHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEE
Confidence 3 79999999 9999999999985211 245778888888888654
Q ss_pred E
Q 005981 644 R 644 (666)
Q Consensus 644 ~ 644 (666)
.
T Consensus 196 ~ 196 (250)
T 2p7i_A 196 R 196 (250)
T ss_dssp E
T ss_pred E
Confidence 3
No 145
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.02 E-value=9.3e-10 Score=105.21 Aligned_cols=91 Identities=11% Similarity=0.129 Sum_probs=69.9
Q ss_pred CCeEEEECCCCchhHHHhccC-CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEeccccccccc
Q 005981 275 IRVVMDAGCGVASFGAYLLPR-NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINWTR 353 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~-~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~~ 353 (666)
..+|||+|||+|.++..+++. +|+|+|+++.++.. .....+...|+.. ++++++||+|+|+..+++. .
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~~~~~~---------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~-~ 92 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRNTVVSTDLNIRALES---------HRGGNLVRADLLC-SINQESVDVVVFNPPYVPD-T 92 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTSEEEEEESCHHHHHT---------CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTT-C
T ss_pred CCeEEEeccCccHHHHHHHhcCcEEEEECCHHHHhc---------ccCCeEEECChhh-hcccCCCCEEEECCCCccC-C
Confidence 469999999999999999887 89999999987643 1223345555555 5666899999997764443 3
Q ss_pred Ch---------HHHHHHHHHhccCCeEEEEEEC
Q 005981 354 DD---------GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 354 d~---------~~~L~el~RvLkPGG~lv~st~ 377 (666)
+. ..++.++.+.| |||.+++...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~ 124 (170)
T 3q87_B 93 DDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVI 124 (170)
T ss_dssp CCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEE
T ss_pred ccccccCCcchHHHHHHHHhhC-CCCEEEEEEe
Confidence 32 47889999999 9999999864
No 146
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.02 E-value=1e-09 Score=116.22 Aligned_cols=112 Identities=15% Similarity=0.190 Sum_probs=81.0
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR 331 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~ 331 (666)
.|.+.+.+.+.. .+..+|||||||+|.++..+++. +|+|+|++ .++..++. .+...+.. ..+...+++.
T Consensus 25 ~y~~ai~~~~~~----~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~-~~~~~~~~~~i~~~~~d~~~ 98 (328)
T 1g6q_1 25 SYRNAIIQNKDL----FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKE-LVELNGFSDKITLLRGKLED 98 (328)
T ss_dssp HHHHHHHHHHHH----HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHH-HHHHTTCTTTEEEEESCTTT
T ss_pred HHHHHHHhhHhh----cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHH-HHHHcCCCCCEEEEECchhh
Confidence 455555544432 23478999999999999888765 79999999 47776653 44445543 3455567788
Q ss_pred CCCCCCCeeEEEeccccccc--ccChHHHHHHHHHhccCCeEEEE
Q 005981 332 LPYPSQAFDLIHCSRCRINW--TRDDGILLLEVNRMLRAGGYFAW 374 (666)
Q Consensus 332 Lpf~d~sFDlVv~s~~l~h~--~~d~~~~L~el~RvLkPGG~lv~ 374 (666)
+++++++||+|+|..+..++ ...+..++.++.++|||||.++.
T Consensus 99 ~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 99 VHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp SCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 88887899999987543332 24567899999999999999974
No 147
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.02 E-value=9.5e-10 Score=112.04 Aligned_cols=103 Identities=11% Similarity=0.165 Sum_probs=76.2
Q ss_pred CCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCCC--CCCCCeeEEEecc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLP--YPSQAFDLIHCSR 346 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~Lp--f~d~sFDlVv~s~ 346 (666)
+..+|||+|||+|.++..++.+ +|+|+|+++.++..++.+. ...++. ..+...|+..++ +++++||+|+|+.
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~-~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSV-AYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHH-HHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHH-HHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 4579999999999999998876 7999999999988877544 344543 345555666554 5578999999865
Q ss_pred ccccc----c---------------cChHHHHHHHHHhccCCeEEEEEEC
Q 005981 347 CRINW----T---------------RDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 347 ~l~h~----~---------------~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.++.. . .+...++.++.++|||||.+++...
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 177 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR 177 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc
Confidence 43322 0 1234789999999999999999753
No 148
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.02 E-value=9.1e-11 Score=114.14 Aligned_cols=118 Identities=11% Similarity=0.032 Sum_probs=67.3
Q ss_pred HHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeeccc
Q 005981 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATR 330 (666)
Q Consensus 255 ~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e 330 (666)
...+++.+.+.+... .+..+|||+|||+|.++..+++. +|+|+|+++.++..++.+... .+....+...|+.
T Consensus 14 ~~~~~~~~~~~l~~~---~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~d~~ 89 (215)
T 4dzr_A 14 TEVLVEEAIRFLKRM---PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAER-FGAVVDWAAADGI 89 (215)
T ss_dssp HHHHHHHHHHHHTTC---CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHH
T ss_pred HHHHHHHHHHHhhhc---CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHH-hCCceEEEEcchH
Confidence 345666666666421 34579999999999998888764 899999999998777644332 2322233333444
Q ss_pred CCCCCC-----CCeeEEEecccccccc------cC-------------------hHHHHHHHHHhccCCeEEEEEEC
Q 005981 331 RLPYPS-----QAFDLIHCSRCRINWT------RD-------------------DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 331 ~Lpf~d-----~sFDlVv~s~~l~h~~------~d-------------------~~~~L~el~RvLkPGG~lv~st~ 377 (666)
. ++++ ++||+|+|+..+++.. .. ...+++++.++|||||++++...
T Consensus 90 ~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 90 E-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp H-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred h-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 3 4444 8999999865433221 00 05778889999999999444433
No 149
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.02 E-value=1.4e-09 Score=116.14 Aligned_cols=111 Identities=16% Similarity=0.261 Sum_probs=83.0
Q ss_pred HHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCC
Q 005981 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRL 332 (666)
Q Consensus 259 i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~L 332 (666)
.+.+.+.+.. ....+|||||||+|.++..++++ +++++|+ +.++..++.+.. +.+.. ..+...|....
T Consensus 179 ~~~l~~~~~~----~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~ 252 (359)
T 1x19_A 179 IQLLLEEAKL----DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAA-EKGVADRMRGIAVDIYKE 252 (359)
T ss_dssp HHHHHHHCCC----TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHH-HTTCTTTEEEEECCTTTS
T ss_pred HHHHHHhcCC----CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHH-hcCCCCCEEEEeCccccC
Confidence 3455555541 34579999999999999888754 8999999 989888775444 34443 34555566666
Q ss_pred CCCCCCeeEEEecccccccccC-hHHHHHHHHHhccCCeEEEEEEC
Q 005981 333 PYPSQAFDLIHCSRCRINWTRD-DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 333 pf~d~sFDlVv~s~~l~h~~~d-~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++++. |+|++..++++|.++ ...+|+++.++|||||.+++.+.
T Consensus 253 ~~~~~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 253 SYPEA--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp CCCCC--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred CCCCC--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 76643 999999998888422 56899999999999999988864
No 150
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.02 E-value=2.2e-11 Score=122.02 Aligned_cols=99 Identities=18% Similarity=0.131 Sum_probs=76.5
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCC--CceEEeecccCCCCCCCCeeEEEeccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~--~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~ 349 (666)
...+|||+|||+|.++..++.. +|+|+|+++.++..++.+ +...++ ...+...|+..++ ++++||+|+++..++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNN-AEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHH-HHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcC
Confidence 3479999999999999999876 899999999999887644 444555 3345555666655 568999999887755
Q ss_pred ccccChHHHHHHHHHhccCCeEEEEE
Q 005981 350 NWTRDDGILLLEVNRMLRAGGYFAWA 375 (666)
Q Consensus 350 h~~~d~~~~L~el~RvLkPGG~lv~s 375 (666)
+. .+....+.++.++|+|||.+++.
T Consensus 156 ~~-~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 156 GP-DYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SG-GGGGSSSBCTTTSCSSCHHHHHH
T ss_pred Cc-chhhhHHHHHHhhcCCcceeHHH
Confidence 54 55566788899999999996554
No 151
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.01 E-value=3.1e-08 Score=107.03 Aligned_cols=127 Identities=17% Similarity=0.196 Sum_probs=78.0
Q ss_pred eeEeeccccchHHHHHHhhC--CCceEEEEeeccCC-CCChhHHHh----ccc-----cccccccCCCCCCCC-CccceE
Q 005981 520 RNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIYD----RGL-----IGVMHDWCEPFDTYP-RTYDLL 586 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~e----rGl-----ig~~~~~ce~~~~yp-~tyDli 586 (666)
..|||+|||+|.++.+|++. +. .|+.+|. +.+++.+.+ .|+ +.++...+ +..++ .+||+|
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~-----~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~--~~~~~~~~fD~I 296 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQA-----KVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA--LSGVEPFRFNAV 296 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTC-----EEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECST--TTTCCTTCEEEE
T ss_pred CeEEEEeCcchHHHHHHHHHCCCC-----EEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechh--hccCCCCCeeEE
Confidence 56999999999999999988 45 4555553 455555544 343 22233333 22344 799999
Q ss_pred EeccccccCC--CCCCHHHHHHHhhhcccCCeEEEEEeC--hhHHHHHHHHHHhcCcEEEEEeccCCCCCceEEEEEEe
Q 005981 587 HAAGLFSVES--KRCNMSTIMLEMDRMLRPGGHVYIRDS--IDVMDELQEIGKAMGWHVTLRETAEGPHASYRILTADK 661 (666)
Q Consensus 587 ha~~~f~~~~--~~c~~~~~l~E~dRiLRPgG~~ii~d~--~~~~~~~~~i~~~l~W~~~~~~~~~~~~~~e~~l~~~k 661 (666)
.|+..|.+.. .+-....++.++.|+|||||.++|... ......++++.. ++...... .+.+|+-+..
T Consensus 297 i~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg----~~~~~a~~----~~F~V~~~~~ 367 (375)
T 4dcm_A 297 LCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG----NCTTIATN----NKFVVLKAVK 367 (375)
T ss_dssp EECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS----CCEEEEEC----SSEEEEEEEC
T ss_pred EECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcC----CEEEEeeC----CCEEEEEEcC
Confidence 9998886532 122234789999999999999999633 334455555544 33333322 2456665544
No 152
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.01 E-value=6.6e-10 Score=119.14 Aligned_cols=101 Identities=13% Similarity=0.174 Sum_probs=76.6
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCC--CCCCCCeeEEEec
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRL--PYPSQAFDLIHCS 345 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~L--pf~d~sFDlVv~s 345 (666)
...+|||||||+|.++..++++ +++++|+ +.++..++.. +.+.++. ..+...|.... |++ ++||+|++.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQ-TAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHH-HTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHH-HHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 3479999999999999888753 7999999 8888776643 3333432 34455565554 566 789999999
Q ss_pred ccccccccC-hHHHHHHHHHhccCCeEEEEEEC
Q 005981 346 RCRINWTRD-DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 346 ~~l~h~~~d-~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.++++|.++ ...+|++++++|||||.+++.+.
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEee
Confidence 998888432 24889999999999999999864
No 153
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.00 E-value=1.1e-09 Score=115.16 Aligned_cols=109 Identities=12% Similarity=0.021 Sum_probs=80.3
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--C---eEEEeCCcchHHHHHHHHHHHcCCC-ceEEeeccc
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--N---VITMSIAPKDVHENQIQFALERGAP-AMVAAFATR 330 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~---V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e 330 (666)
...+.+.+.+.. .++.+|||||||+|.++..+++. . |+++|+++.++..++.. +...++. ..+...|..
T Consensus 62 ~~~~~l~~~l~~----~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~-~~~~g~~~v~~~~~d~~ 136 (317)
T 1dl5_A 62 SLMALFMEWVGL----DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRN-VERLGIENVIFVCGDGY 136 (317)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHH-HHHTTCCSEEEEESCGG
T ss_pred HHHHHHHHhcCC----CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCeEEEECChh
Confidence 445566666542 34579999999999999888764 4 99999999998877644 3444544 344455666
Q ss_pred CCCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 331 RLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 331 ~Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
..+..+++||+|++..++.|+. .++.++|||||.+++...
T Consensus 137 ~~~~~~~~fD~Iv~~~~~~~~~-------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 137 YGVPEFSPYDVIFVTVGVDEVP-------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp GCCGGGCCEEEEEECSBBSCCC-------HHHHHHEEEEEEEEEEBC
T ss_pred hccccCCCeEEEEEcCCHHHHH-------HHHHHhcCCCcEEEEEEC
Confidence 5444567899999988877663 578899999999999853
No 154
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.00 E-value=6.2e-10 Score=105.14 Aligned_cols=126 Identities=17% Similarity=0.150 Sum_probs=92.7
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhccc-cccccccCCCCCCCC-CccceEEeccccccCC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRGL-IGVMHDWCEPFDTYP-RTYDLLHAAGLFSVES 596 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erGl-ig~~~~~ce~~~~yp-~tyDliha~~~f~~~~ 596 (666)
.+|||+|||.|.++.+|++.+. +|+.+|. +.+++.+.++.- +.+.+.- ..++ .+||+|.+..++.+..
T Consensus 19 ~~vLDiG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~v~~~~~d----~~~~~~~~D~v~~~~~l~~~~ 89 (170)
T 3i9f_A 19 GVIVDYGCGNGFYCKYLLEFAT-----KLYCIDINVIALKEVKEKFDSVITLSDP----KEIPDNSVDFILFANSFHDMD 89 (170)
T ss_dssp EEEEEETCTTCTTHHHHHTTEE-----EEEEECSCHHHHHHHHHHCTTSEEESSG----GGSCTTCEEEEEEESCSTTCS
T ss_pred CeEEEECCCCCHHHHHHHhhcC-----eEEEEeCCHHHHHHHHHhCCCcEEEeCC----CCCCCCceEEEEEccchhccc
Confidence 5699999999999999999842 7778874 678888887721 3333322 2234 8999999999988875
Q ss_pred CCCCHHHHHHHhhhcccCCeEEEEEeChh-------------HHHHHHHHHHhcCcEEEEEeccCCCCCceEEEEEEeC
Q 005981 597 KRCNMSTIMLEMDRMLRPGGHVYIRDSID-------------VMDELQEIGKAMGWHVTLRETAEGPHASYRILTADKR 662 (666)
Q Consensus 597 ~~c~~~~~l~E~dRiLRPgG~~ii~d~~~-------------~~~~~~~i~~~l~W~~~~~~~~~~~~~~e~~l~~~k~ 662 (666)
+...+|.|+.|+|||||++++.+... ..+.++++++ .|++.....-. .....|++.|+
T Consensus 90 ---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~---~~~~~l~~~~~ 160 (170)
T 3i9f_A 90 ---DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPT---PYHFGLVLKRK 160 (170)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSS---TTEEEEEEEEC
T ss_pred ---CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCCC---CceEEEEEecC
Confidence 45799999999999999999984321 2567888887 88876544322 24567777764
No 155
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.00 E-value=8.2e-10 Score=111.15 Aligned_cols=124 Identities=16% Similarity=0.214 Sum_probs=89.8
Q ss_pred HHHhcccCCCceeeEeeccccchHHHHHHhhC-CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCCCCC
Q 005981 508 YVRALHWKKMKLRNVLDMRAGFGGFAAALIEQ-KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEPFDT 578 (666)
Q Consensus 508 Y~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~-~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~~~~ 578 (666)
..+.+++..+ .+|||+|||.|.++.+|++. +. +|+.+|. +.+++.+.++ |+ +.+.+...+.++.
T Consensus 28 l~~~~~~~~~--~~VLDiGcG~G~~~~~la~~~~~-----~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 100 (256)
T 1nkv_A 28 LGRVLRMKPG--TRILDLGSGSGEMLCTWARDHGI-----TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA 100 (256)
T ss_dssp HHHHTCCCTT--CEEEEETCTTCHHHHHHHHHTCC-----EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC
T ss_pred HHHhcCCCCC--CEEEEECCCCCHHHHHHHHhcCC-----eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc
Confidence 3444555544 36999999999999999986 55 4566663 5677666554 54 4555554455544
Q ss_pred CCCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh----------------------hHHHHHHHHHHh
Q 005981 579 YPRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI----------------------DVMDELQEIGKA 636 (666)
Q Consensus 579 yp~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~----------------------~~~~~~~~i~~~ 636 (666)
+.+||+|+|.+++.+..+ ...+|.|+.|+|||||++++.+.. .....+..+++.
T Consensus 101 -~~~fD~V~~~~~~~~~~~---~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 176 (256)
T 1nkv_A 101 -NEKCDVAACVGATWIAGG---FAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDD 176 (256)
T ss_dssp -SSCEEEEEEESCGGGTSS---SHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHT
T ss_pred -CCCCCEEEECCChHhcCC---HHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHH
Confidence 789999999988877764 479999999999999999997531 023677888888
Q ss_pred cCcEEE
Q 005981 637 MGWHVT 642 (666)
Q Consensus 637 l~W~~~ 642 (666)
..++..
T Consensus 177 aGf~~~ 182 (256)
T 1nkv_A 177 LGYDVV 182 (256)
T ss_dssp TTBCCC
T ss_pred CCCeeE
Confidence 888753
No 156
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.00 E-value=1.3e-09 Score=114.42 Aligned_cols=101 Identities=14% Similarity=0.136 Sum_probs=77.8
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCCCCCCCCeeEEEeccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSRC 347 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~Lpf~d~sFDlVv~s~~ 347 (666)
+..+|||||||+|.++..+++. +++++|++ .++..++..... .++. ..+...|....+++++ ||+|++.++
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~ 241 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARI-QGVASRYHTIAGSAFEVDYGND-YDLVLLPNF 241 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHH-HTCGGGEEEEESCTTTSCCCSC-EEEEEEESC
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHh-cCCCcceEEEecccccCCCCCC-CcEEEEcch
Confidence 4479999999999998888754 79999999 888877654443 3433 3445556666666644 999999999
Q ss_pred cccccc-ChHHHHHHHHHhccCCeEEEEEEC
Q 005981 348 RINWTR-DDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 348 l~h~~~-d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++|.+ +...+|+++.++|+|||++++.+.
T Consensus 242 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 242 LHHFDVATCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hccCCHHHHHHHHHHHHHhCCCCcEEEEEee
Confidence 888832 235899999999999999999865
No 157
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.99 E-value=1.1e-09 Score=107.98 Aligned_cols=120 Identities=16% Similarity=0.225 Sum_probs=90.1
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc-------cccccccCCCCCCCCCccceEE
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL-------IGVMHDWCEPFDTYPRTYDLLH 587 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl-------ig~~~~~ce~~~~yp~tyDlih 587 (666)
..|||+|||.|.++.+|++.+. +|+.+|. +.+++.+.++ |+ +.+...-.+.++.-+.+||+|.
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKGY-----SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CeEEEECCCCCHHHHHHHhCCC-----eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 3699999999999999999976 5666663 5677777663 33 3344444444443248999999
Q ss_pred eccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh-----------------------------------------hH
Q 005981 588 AAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI-----------------------------------------DV 626 (666)
Q Consensus 588 a~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~-----------------------------------------~~ 626 (666)
+..++.+..+.-....+|.++.|+|||||++++.+.. -.
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFT 186 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBC
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCC
Confidence 9999988876534458999999999999999997431 13
Q ss_pred HHHHHHHHHhcCcEEEEE
Q 005981 627 MDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 627 ~~~~~~i~~~l~W~~~~~ 644 (666)
.+.+++++++-.+++...
T Consensus 187 ~~~l~~ll~~aGf~~~~~ 204 (235)
T 3sm3_A 187 EKELVFLLTDCRFEIDYF 204 (235)
T ss_dssp HHHHHHHHHTTTEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEE
Confidence 678899999999987644
No 158
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.99 E-value=8.9e-10 Score=107.68 Aligned_cols=120 Identities=20% Similarity=0.261 Sum_probs=92.1
Q ss_pred eEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhccc--cccccccCCCCCCCCCccceEEeccccccCCC
Q 005981 521 NVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRGL--IGVMHDWCEPFDTYPRTYDLLHAAGLFSVESK 597 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erGl--ig~~~~~ce~~~~yp~tyDliha~~~f~~~~~ 597 (666)
.|||+|||.|.++.+|++.+. +|+.+| ++.+++.+.++|+ +.+.+.-.+.+ .-+.+||+|.|..++.+..+
T Consensus 49 ~vLdiG~G~G~~~~~l~~~~~-----~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~ 122 (218)
T 3ou2_A 49 DVLELASGTGYWTRHLSGLAD-----RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPD 122 (218)
T ss_dssp EEEEESCTTSHHHHHHHHHSS-----EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCH
T ss_pred eEEEECCCCCHHHHHHHhcCC-----eEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEechhhcCCH
Confidence 799999999999999999976 566666 3678888888775 44444443444 22489999999999988765
Q ss_pred CCCHHHHHHHhhhcccCCeEEEEEeCh----------------------------------hHHHHHHHHHHhcCcEEEE
Q 005981 598 RCNMSTIMLEMDRMLRPGGHVYIRDSI----------------------------------DVMDELQEIGKAMGWHVTL 643 (666)
Q Consensus 598 ~c~~~~~l~E~dRiLRPgG~~ii~d~~----------------------------------~~~~~~~~i~~~l~W~~~~ 643 (666)
. .+..+|.++.|+|||||.+++.+.. -..+.+.++++.-.+++..
T Consensus 123 ~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~ 201 (218)
T 3ou2_A 123 D-RFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSV 201 (218)
T ss_dssp H-HHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEE
T ss_pred H-HHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEe
Confidence 2 3468999999999999999998431 1346788999999999776
Q ss_pred Eecc
Q 005981 644 RETA 647 (666)
Q Consensus 644 ~~~~ 647 (666)
....
T Consensus 202 ~~~~ 205 (218)
T 3ou2_A 202 DEVH 205 (218)
T ss_dssp EEEE
T ss_pred eecc
Confidence 6553
No 159
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.99 E-value=4.9e-10 Score=109.77 Aligned_cols=117 Identities=21% Similarity=0.264 Sum_probs=89.1
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc-cccccccccCCCCCCCCCccceEEeccccccCCC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR-GLIGVMHDWCEPFDTYPRTYDLLHAAGLFSVESK 597 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er-Glig~~~~~ce~~~~yp~tyDliha~~~f~~~~~ 597 (666)
..|||+|||.|.++.+|++.|. +|+.+|. +.+++.+.++ ++ .+...-.+.++ .+.+||+|.|..++.+...
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~-~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~ 117 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAGF-----DVDATDGSPELAAEASRRLGR-PVRTMLFHQLD-AIDAYDAVWAHACLLHVPR 117 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHTS-CCEECCGGGCC-CCSCEEEEEECSCGGGSCH
T ss_pred CcEEEECCCCCHHHHHHHHcCC-----eEEEECCCHHHHHHHHHhcCC-ceEEeeeccCC-CCCcEEEEEecCchhhcCH
Confidence 3699999999999999999976 5666663 5788888877 43 23333333444 4599999999999988762
Q ss_pred CCCHHHHHHHhhhcccCCeEEEEEeCh---------------hHHHHHHHHHHhcC-cEEEEE
Q 005981 598 RCNMSTIMLEMDRMLRPGGHVYIRDSI---------------DVMDELQEIGKAMG-WHVTLR 644 (666)
Q Consensus 598 ~c~~~~~l~E~dRiLRPgG~~ii~d~~---------------~~~~~~~~i~~~l~-W~~~~~ 644 (666)
-+...+|.|+.|+|||||++++.... -..+.++.+++.-. |++...
T Consensus 118 -~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 118 -DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAV 179 (211)
T ss_dssp -HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEE
T ss_pred -HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEE
Confidence 24579999999999999999997221 14688999999998 887544
No 160
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.98 E-value=1.3e-09 Score=116.43 Aligned_cols=99 Identities=24% Similarity=0.336 Sum_probs=75.3
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCCCCCCCCeeEEEeccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSRC 347 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~Lpf~d~sFDlVv~s~~ 347 (666)
...+|||||||+|.++..+++. +++++|+ +.++..++.+.. ..++. ..+...|... +++. .||+|++..+
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 257 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFA-DAGLADRVTVAEGDFFK-PLPV-TADVVLLSFV 257 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHH-HTTCTTTEEEEECCTTS-CCSC-CEEEEEEESC
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHH-hcCCCCceEEEeCCCCC-cCCC-CCCEEEEecc
Confidence 4579999999999998888754 7999999 888887765443 34443 3444455433 3443 4999999999
Q ss_pred ccccccCh--HHHHHHHHHhccCCeEEEEEEC
Q 005981 348 RINWTRDD--GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 348 l~h~~~d~--~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++| .+. ..+|+++.++|||||++++.+.
T Consensus 258 l~~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 258 LLNW-SDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp GGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCC-CHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 8888 444 3899999999999999999864
No 161
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.98 E-value=5.5e-10 Score=115.88 Aligned_cols=100 Identities=15% Similarity=0.163 Sum_probs=71.4
Q ss_pred CCeEEEECCCCch----hHHHhcc--------CCeEEEeCCcchHHHHHHHHH---HH-------------------cC-
Q 005981 275 IRVVMDAGCGVAS----FGAYLLP--------RNVITMSIAPKDVHENQIQFA---LE-------------------RG- 319 (666)
Q Consensus 275 ~~~VLDIGCGtG~----~a~~L~~--------~~V~gvDiS~~~l~~a~~~~a---~~-------------------rg- 319 (666)
..+|||+|||||. ++..|++ .+|+|+|+|+.++..|+...- .. .+
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 3689999999996 5544432 279999999999988764310 00 00
Q ss_pred --------CCceEEeecccCCCCC-CCCeeEEEecccccccccCh--HHHHHHHHHhccCCeEEEEE
Q 005981 320 --------APAMVAAFATRRLPYP-SQAFDLIHCSRCRINWTRDD--GILLLEVNRMLRAGGYFAWA 375 (666)
Q Consensus 320 --------~~~~~~~~d~e~Lpf~-d~sFDlVv~s~~l~h~~~d~--~~~L~el~RvLkPGG~lv~s 375 (666)
....+...++...+++ .+.||+|+|.++++++ ++. ..++.+++++|+|||+|++.
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf-~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYF-DKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGS-CHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhC-CHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 0123444455555555 5789999999987777 433 58999999999999999885
No 162
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.98 E-value=2.9e-09 Score=106.19 Aligned_cols=119 Identities=14% Similarity=0.087 Sum_probs=89.4
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhcc----c---cccccccCCCCCCCCCccceEEeccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRG----L---IGVMHDWCEPFDTYPRTYDLLHAAGL 591 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erG----l---ig~~~~~ce~~~~yp~tyDliha~~~ 591 (666)
.+|||+|||.|.++.+|++.+. +|+.+|. +.+++.+.++. . +.+...-.+.++ .+.+||+|.+..+
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~ 141 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPER-----FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVF 141 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTE-----EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESS
T ss_pred CCEEEeCCCCCHHHHHHHhCCC-----eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChh
Confidence 3799999999999999999875 5667773 57777776653 2 344443333333 2379999999998
Q ss_pred cccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh-----------hHHHHHHHHHHhcCcEEEEEe
Q 005981 592 FSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI-----------DVMDELQEIGKAMGWHVTLRE 645 (666)
Q Consensus 592 f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~-----------~~~~~~~~i~~~l~W~~~~~~ 645 (666)
|.+.. ..+...+|.++.|+|||||++++.+.. -..+.++++++.-.|++....
T Consensus 142 l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 205 (235)
T 3lcc_A 142 FCAIE-PEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVE 205 (235)
T ss_dssp TTTSC-GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEE
T ss_pred hhcCC-HHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEE
Confidence 88875 235679999999999999999996421 136889999999999986553
No 163
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.98 E-value=3.4e-09 Score=103.94 Aligned_cols=101 Identities=20% Similarity=0.233 Sum_probs=79.4
Q ss_pred CCceeeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhcc----ccccccccCCCCCCCCCccceEEecc
Q 005981 516 KMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRG----LIGVMHDWCEPFDTYPRTYDLLHAAG 590 (666)
Q Consensus 516 ~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erG----lig~~~~~ce~~~~yp~tyDliha~~ 590 (666)
...-.+|||+|||.|.++.+|++.+. +|+.+|. +.+++.+.++. -+.+.+.-.+.++ .+.+||+|.|..
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~ 122 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHCK-----RLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAE 122 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGEE-----EEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEES
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcCC-----EEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEcc
Confidence 34456799999999999999999853 6777774 67888887763 2455555555555 358999999999
Q ss_pred ccccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 591 LFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 591 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
++.+..+.-.+..+|.++.|+|||||+++|.+
T Consensus 123 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 123 VLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp CGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 99988765555688999999999999999974
No 164
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.98 E-value=2.3e-09 Score=105.21 Aligned_cols=108 Identities=14% Similarity=0.148 Sum_probs=76.4
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeeccc
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAP-AMVAAFATR 330 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e 330 (666)
.....+.+.+.. .+..+|||||||+|.++..+++ .+|+++|+++.++..++..... .+.. ..+...+..
T Consensus 64 ~~~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~v~~~~~d~~ 138 (215)
T 2yxe_A 64 HMVGMMCELLDL----KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRK-LGYDNVIVIVGDGT 138 (215)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH-HTCTTEEEEESCGG
T ss_pred HHHHHHHHhhCC----CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-cCCCCeEEEECCcc
Confidence 344555555531 3457999999999988887764 3799999999988877654433 3433 233444442
Q ss_pred CCCCC-CCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 331 RLPYP-SQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 331 ~Lpf~-d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
. +++ +++||+|++..+++++. .++.++|||||.+++...
T Consensus 139 ~-~~~~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 139 L-GYEPLAPYDRIYTTAAGPKIP-------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp G-CCGGGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEES
T ss_pred c-CCCCCCCeeEEEECCchHHHH-------HHHHHHcCCCcEEEEEEC
Confidence 2 233 57899999988876663 488999999999999864
No 165
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.97 E-value=2.4e-09 Score=107.88 Aligned_cols=108 Identities=10% Similarity=0.067 Sum_probs=80.7
Q ss_pred HHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCC
Q 005981 260 DQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLP 333 (666)
Q Consensus 260 ~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lp 333 (666)
..+.+.+.. .+..+|||+|||+|.++..++.. +|+++|+++.++..++.......+.. ..+...|....+
T Consensus 86 ~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~ 161 (258)
T 2pwy_A 86 SAMVTLLDL----APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE 161 (258)
T ss_dssp HHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC
T ss_pred HHHHHHcCC----CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC
Confidence 445554431 34579999999999888877643 89999999999888775544431332 345555677777
Q ss_pred CCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 334 YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 334 f~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++++||+|++. + +++..++.++.++|+|||.+++..+
T Consensus 162 ~~~~~~D~v~~~-----~-~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 162 LEEAAYDGVALD-----L-MEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp CCTTCEEEEEEE-----S-SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCCcCEEEEC-----C-cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 778899999963 3 5667899999999999999999874
No 166
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.97 E-value=1.5e-09 Score=116.72 Aligned_cols=100 Identities=16% Similarity=0.185 Sum_probs=77.1
Q ss_pred CCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCCCCCCCCeeEEEecc
Q 005981 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSR 346 (666)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~Lpf~d~sFDlVv~s~ 346 (666)
....+|||||||+|.++..++++ +++++|+ +.++..++.... +.++. ..+...|.. .+++. .||+|++.+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~-~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~ 276 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLT-GRGLADRCEILPGDFF-ETIPD-GADVYLIKH 276 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHH-HTTCTTTEEEEECCTT-TCCCS-SCSEEEEES
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhh-hcCcCCceEEeccCCC-CCCCC-CceEEEhhh
Confidence 34579999999999999888764 7999999 888877765443 34432 344455554 45555 899999999
Q ss_pred cccccccChH--HHHHHHHHhccCCeEEEEEEC
Q 005981 347 CRINWTRDDG--ILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 347 ~l~h~~~d~~--~~L~el~RvLkPGG~lv~st~ 377 (666)
++++| ++.. .+|+++.++|||||++++.+.
T Consensus 277 vlh~~-~d~~~~~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 277 VLHDW-DDDDVVRILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp CGGGS-CHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred hhccC-CHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 98888 4444 799999999999999999864
No 167
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.97 E-value=1.1e-09 Score=109.09 Aligned_cols=116 Identities=17% Similarity=0.150 Sum_probs=89.9
Q ss_pred eEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhccc---cccccccCCCCCCCCCccceEEeccccccCC
Q 005981 521 NVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRGL---IGVMHDWCEPFDTYPRTYDLLHAAGLFSVES 596 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erGl---ig~~~~~ce~~~~yp~tyDliha~~~f~~~~ 596 (666)
+|||+|||.|.++.+|++.|. +|+.+| ++.+++.+.+++. +.+.+...+.++.-+.+||+|.+.+++.+..
T Consensus 56 ~vLDiG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 130 (242)
T 3l8d_A 56 EVLDVGCGDGYGTYKLSRTGY-----KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE 130 (242)
T ss_dssp EEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS
T ss_pred eEEEEcCCCCHHHHHHHHcCC-----eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc
Confidence 699999999999999999987 566666 3678888888743 4444444444543248999999999998875
Q ss_pred CCCCHHHHHHHhhhcccCCeEEEEEeCh----------------------hHHHHHHHHHHhcCcEEEEE
Q 005981 597 KRCNMSTIMLEMDRMLRPGGHVYIRDSI----------------------DVMDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 597 ~~c~~~~~l~E~dRiLRPgG~~ii~d~~----------------------~~~~~~~~i~~~l~W~~~~~ 644 (666)
+ ...+|.++.|+|||||+++|.+.. -....++++++...+++...
T Consensus 131 ~---~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 131 E---PLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp C---HHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred C---HHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe
Confidence 4 479999999999999999997511 11357899999999997654
No 168
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.97 E-value=3.3e-10 Score=113.53 Aligned_cols=117 Identities=14% Similarity=0.154 Sum_probs=88.2
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhccccccccccCCCC-CCCC-CccceEEeccccccCC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRGLIGVMHDWCEPF-DTYP-RTYDLLHAAGLFSVES 596 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erGlig~~~~~ce~~-~~yp-~tyDliha~~~f~~~~ 596 (666)
.+|||+|||.|.++.+|++.|+ +|+.+| ++.+++.+.++ +.+...-.+.+ ..++ .+||+|.|.+++.+..
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~ 115 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEGI-----ESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLD 115 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHTC-----CEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSC
T ss_pred CeEEEEeCCCCHHHHHHHhCCC-----cEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhhCC
Confidence 4699999999999999999987 456666 36788888887 44443332222 1344 8999999999999886
Q ss_pred CCCCHHHHHHHhhhcccCCeEEEEEeChh-------------------HHHHHHHHHHhcCcEEEEE
Q 005981 597 KRCNMSTIMLEMDRMLRPGGHVYIRDSID-------------------VMDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 597 ~~c~~~~~l~E~dRiLRPgG~~ii~d~~~-------------------~~~~~~~i~~~l~W~~~~~ 644 (666)
+ -++..+|.++.|+|||||++++..... ..+.++.++++-.+++...
T Consensus 116 ~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 181 (240)
T 3dli_A 116 P-ERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKI 181 (240)
T ss_dssp G-GGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEE
T ss_pred c-HHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEE
Confidence 3 255799999999999999999974211 1367888888888886543
No 169
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.97 E-value=1.1e-09 Score=109.58 Aligned_cols=93 Identities=17% Similarity=0.157 Sum_probs=69.3
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccC----CCCCCCCeeEEEec
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR----LPYPSQAFDLIHCS 345 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~----Lpf~d~sFDlVv~s 345 (666)
+..+|||+|||+|.++..|++. +|+|+|+++.++..++.. +... ....+...|+.. +++. ++||+|++
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~-~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~~- 149 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDA-CAER-ENIIPILGDANKPQEYANIV-EKVDVIYE- 149 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHH-TTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEEE-
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHH-hhcC-CCeEEEECCCCCcccccccC-ccEEEEEE-
Confidence 4579999999999988887643 799999999988766532 3222 223344456665 6666 78999982
Q ss_pred ccccccccCh---HHHHHHHHHhccCCeEEEEE
Q 005981 346 RCRINWTRDD---GILLLEVNRMLRAGGYFAWA 375 (666)
Q Consensus 346 ~~l~h~~~d~---~~~L~el~RvLkPGG~lv~s 375 (666)
+. .++ ..++.++.++|||||.++++
T Consensus 150 ----~~-~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 150 ----DV-AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ----CC-CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----ec-CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 22 344 67799999999999999996
No 170
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.97 E-value=4.8e-09 Score=107.85 Aligned_cols=116 Identities=16% Similarity=0.179 Sum_probs=80.8
Q ss_pred cHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhcc----CCeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeec
Q 005981 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP----RNVITMSIAPKDVHENQIQFALERGAP-AMVAAFA 328 (666)
Q Consensus 254 g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~----~~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d 328 (666)
.....++.+.+.+. .+..+|||+|||+|.++..++. .+|+++|+++.++..++.+. ...++. ..+...|
T Consensus 94 ~te~l~~~~l~~~~-----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~-~~~~~~~v~~~~~d 167 (276)
T 2b3t_A 94 DTECLVEQALARLP-----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNA-QHLAIKNIHILQSD 167 (276)
T ss_dssp THHHHHHHHHHHSC-----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHH-HHHTCCSEEEECCS
T ss_pred hHHHHHHHHHHhcc-----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCceEEEEcc
Confidence 34556667766664 2346899999999999888873 38999999999998877543 334543 3344444
Q ss_pred ccCCCCCCCCeeEEEeccccccc------------c------------cChHHHHHHHHHhccCCeEEEEEE
Q 005981 329 TRRLPYPSQAFDLIHCSRCRINW------------T------------RDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 329 ~e~Lpf~d~sFDlVv~s~~l~h~------------~------------~d~~~~L~el~RvLkPGG~lv~st 376 (666)
... ++++++||+|+++...+.. . .....++.++.++|||||++++..
T Consensus 168 ~~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 168 WFS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp TTG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hhh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 433 2346789999987432221 0 123578899999999999999974
No 171
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.97 E-value=2.3e-09 Score=112.86 Aligned_cols=98 Identities=13% Similarity=0.112 Sum_probs=75.5
Q ss_pred CeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHc-CCCceEEeecccCCCCCCCCeeEEEecccccc
Q 005981 276 RVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALER-GAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (666)
Q Consensus 276 ~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~r-g~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h 350 (666)
.+|||||||+|.++..++++ +++++|+ +.++..++....... .....+...|... +++ ++||+|++..++++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~ 245 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGD 245 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhccC
Confidence 79999999999998888753 7999999 989887765443321 1123444455544 555 67999999999888
Q ss_pred cccChH--HHHHHHHHhccCCeEEEEEEC
Q 005981 351 WTRDDG--ILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 351 ~~~d~~--~~L~el~RvLkPGG~lv~st~ 377 (666)
| .+.. .+|+++.++|||||++++.+.
T Consensus 246 ~-~~~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 246 L-DEAASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp C-CHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred C-CHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 8 4444 899999999999999999864
No 172
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.96 E-value=8.7e-10 Score=113.33 Aligned_cols=117 Identities=16% Similarity=0.199 Sum_probs=89.6
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCCCCCC-CCccceEEecc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEPFDTY-PRTYDLLHAAG 590 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~~~~y-p~tyDliha~~ 590 (666)
..|||+|||.|.++.+|++.|. +|+.+|. +.+++.+.++ |+ +.+.+...+.++.+ +.+||+|.|.+
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 144 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAERGH-----QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHA 144 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEES
T ss_pred CEEEEeCCcchHHHHHHHHCCC-----EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECc
Confidence 4699999999999999999987 5666663 5777777665 44 44555555555534 48999999999
Q ss_pred ccccCCCCCCHHHHHHHhhhcccCCeEEEEEeChh----------------------------------HHHHHHHHHHh
Q 005981 591 LFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSID----------------------------------VMDELQEIGKA 636 (666)
Q Consensus 591 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~----------------------------------~~~~~~~i~~~ 636 (666)
++.+..+ ...+|.|+.|+|||||+++|.+... ..+.++.+++.
T Consensus 145 ~l~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 221 (285)
T 4htf_A 145 VLEWVAD---PRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEE 221 (285)
T ss_dssp CGGGCSC---HHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHH
T ss_pred hhhcccC---HHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHH
Confidence 9988764 4799999999999999999975311 13578888888
Q ss_pred cCcEEEEE
Q 005981 637 MGWHVTLR 644 (666)
Q Consensus 637 l~W~~~~~ 644 (666)
-.+++...
T Consensus 222 aGf~v~~~ 229 (285)
T 4htf_A 222 AGWQIMGK 229 (285)
T ss_dssp TTCEEEEE
T ss_pred CCCceeee
Confidence 88887643
No 173
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.96 E-value=1.6e-09 Score=111.33 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=76.2
Q ss_pred HHhcccCCCceeeEeeccccchHHHHHHhh-CCCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCCCCCC
Q 005981 509 VRALHWKKMKLRNVLDMRAGFGGFAAALIE-QKFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEPFDTY 579 (666)
Q Consensus 509 ~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~-~~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~~~~y 579 (666)
.+.+++..+ ..|||+|||.|+++.+|++ .|+ +|+.+|. +.+++.+.++ |+ +.+.+...+. +
T Consensus 57 ~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~-----~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---~ 126 (287)
T 1kpg_A 57 LGKLGLQPG--MTLLDVGCGWGATMMRAVEKYDV-----NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ---F 126 (287)
T ss_dssp HTTTTCCTT--CEEEEETCTTSHHHHHHHHHHCC-----EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG---C
T ss_pred HHHcCCCCc--CEEEEECCcccHHHHHHHHHcCC-----EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh---C
Confidence 344444444 3699999999999999994 465 5666663 5777777665 43 4444433333 4
Q ss_pred CCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 580 PRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 580 p~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
|.+||+|++.++|.|... .+...+|.|+.|+|||||.+++.+
T Consensus 127 ~~~fD~v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 127 DEPVDRIVSIGAFEHFGH-ERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp CCCCSEEEEESCGGGTCT-TTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCeeEEEEeCchhhcCh-HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 589999999999998853 356899999999999999999974
No 174
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.96 E-value=1e-09 Score=109.72 Aligned_cols=98 Identities=16% Similarity=0.177 Sum_probs=70.9
Q ss_pred CCCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccC---CCCCCCCeeEEEec
Q 005981 274 HIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR---LPYPSQAFDLIHCS 345 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~---Lpf~d~sFDlVv~s 345 (666)
...+|||+|||+|.++..|++ .+|+|+|+++.++..+. +.++.+ ....+...|+.. +++.+++||+|++.
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~-~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLI-NLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHH-HHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHH-HHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 457999999999999888865 37999999998776554 455544 233344455554 45557899999975
Q ss_pred ccccccccCh-HHHHHHHHHhccCCeEEEEEEC
Q 005981 346 RCRINWTRDD-GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 346 ~~l~h~~~d~-~~~L~el~RvLkPGG~lv~st~ 377 (666)
.. ..+. ..++.++.++|||||.++++..
T Consensus 155 ~~----~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 155 VA----QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp CC----CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CC----CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 43 1222 4568889999999999999753
No 175
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.96 E-value=2.4e-09 Score=105.40 Aligned_cols=138 Identities=15% Similarity=0.237 Sum_probs=92.5
Q ss_pred HHHHHHHHHHhcccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhc----c-------cccc
Q 005981 501 WNEIIESYVRALHWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDR----G-------LIGV 568 (666)
Q Consensus 501 w~~~v~~Y~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~er----G-------lig~ 568 (666)
..++++...+.+....+ ..|||+|||.|.++.+|++++-. .+|+.+| ++.+++.+.++ | -+.+
T Consensus 14 ~~~~~~~l~~~l~~~~~--~~vLDiGcG~G~~~~~l~~~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~ 88 (217)
T 3jwh_A 14 NQQRMNGVVAALKQSNA--RRVIDLGCGQGNLLKILLKDSFF---EQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQL 88 (217)
T ss_dssp HHHHHHHHHHHHHHTTC--CEEEEETCTTCHHHHHHHHCTTC---SEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEE
T ss_pred HHHHHHHHHHHHHhcCC--CEEEEeCCCCCHHHHHHHhhCCC---CEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEE
Confidence 33444433344443333 47999999999999999987411 1566666 35778777765 2 1334
Q ss_pred ccccCCCCCCCCCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeChhH----------------------
Q 005981 569 MHDWCEPFDTYPRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSIDV---------------------- 626 (666)
Q Consensus 569 ~~~~ce~~~~yp~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~~---------------------- 626 (666)
+....+..+.-+.+||+|.|..++.+..+ -.+..+|.++.|+|||||.+++.+..+.
T Consensus 89 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (217)
T 3jwh_A 89 IQGALTYQDKRFHGYDAATVIEVIEHLDL-SRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWT 167 (217)
T ss_dssp EECCTTSCCGGGCSCSEEEEESCGGGCCH-HHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBC
T ss_pred EeCCcccccccCCCcCEEeeHHHHHcCCH-HHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccC
Confidence 43332222222279999999999988753 2456899999999999999988765431
Q ss_pred HHHHH----HHHHhcCcEEEEE
Q 005981 627 MDELQ----EIGKAMGWHVTLR 644 (666)
Q Consensus 627 ~~~~~----~i~~~l~W~~~~~ 644 (666)
.+.++ +++++-.+++...
T Consensus 168 ~~~l~~~~~~~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 168 RSQFQNWANKITERFAYNVQFQ 189 (217)
T ss_dssp HHHHHHHHHHHHHHSSEEEEEC
T ss_pred HHHHHHHHHHHHHHcCceEEEE
Confidence 23344 8889999988776
No 176
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.96 E-value=1.2e-09 Score=112.32 Aligned_cols=97 Identities=10% Similarity=0.147 Sum_probs=74.3
Q ss_pred CCCCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHc-CCC-ceEEeecccCCCCCCCCeeEEEec
Q 005981 273 HHIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALER-GAP-AMVAAFATRRLPYPSQAFDLIHCS 345 (666)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~r-g~~-~~~~~~d~e~Lpf~d~sFDlVv~s 345 (666)
.+..+|||+|||+|.++..+++ .+|+++|+++.++..++.+. ... +.. ..+...|+.. ++++++||+|++
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~- 185 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNL-SEFYDIGNVRTSRSDIAD-FISDQMYDAVIA- 185 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHH-HTTSCCTTEEEECSCTTT-CCCSCCEEEEEE-
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHH-HhcCCCCcEEEEECchhc-cCcCCCccEEEE-
Confidence 3557999999999998887764 28999999999887776443 333 433 3444455555 566789999996
Q ss_pred ccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 346 RCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 346 ~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+. +++..++.++.++|||||.+++++.
T Consensus 186 ----~~-~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 186 ----DI-PDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp ----CC-SCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred ----cC-cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 33 5677899999999999999999975
No 177
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.96 E-value=1.3e-09 Score=104.62 Aligned_cols=136 Identities=18% Similarity=0.129 Sum_probs=89.0
Q ss_pred eEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhc----cc--cccccccCCCCCCC-CCccceEEec-cc
Q 005981 521 NVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDR----GL--IGVMHDWCEPFDTY-PRTYDLLHAA-GL 591 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~er----Gl--ig~~~~~ce~~~~y-p~tyDliha~-~~ 591 (666)
.|||+|||.|.++.+|++++. .|+.+| ++.+++.+.++ |+ +.+.++..+.+..+ +.+||+|.++ +.
T Consensus 25 ~vLDiGcG~G~~~~~la~~~~-----~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 25 IVVDATMGNGNDTAFLAGLSK-----KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp EEEESCCTTSHHHHHHHTTSS-----EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred EEEEEcCCCCHHHHHHHHhCC-----EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 599999999999999999876 566666 35677766554 54 55566665554434 4889999876 22
Q ss_pred cccCC-----CCCCHHHHHHHhhhcccCCeEEEEEeC------hhHHHHHHHHHHhcC---cEEEEEeccCCCCCceEEE
Q 005981 592 FSVES-----KRCNMSTIMLEMDRMLRPGGHVYIRDS------IDVMDELQEIGKAMG---WHVTLRETAEGPHASYRIL 657 (666)
Q Consensus 592 f~~~~-----~~c~~~~~l~E~dRiLRPgG~~ii~d~------~~~~~~~~~i~~~l~---W~~~~~~~~~~~~~~e~~l 657 (666)
+.... ..-....+|.|+.|+|||||.+++... .+..+.+.+.++.+. |.+.....-+....+..++
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 179 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQINTPPFLV 179 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSCSSCCCEEE
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhccCCCCCeEE
Confidence 22110 111224788999999999999999742 334566777777665 7776554433333455666
Q ss_pred EEEe
Q 005981 658 TADK 661 (666)
Q Consensus 658 ~~~k 661 (666)
+..|
T Consensus 180 ~i~~ 183 (185)
T 3mti_A 180 MLEK 183 (185)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6655
No 178
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.96 E-value=1.4e-09 Score=115.44 Aligned_cols=100 Identities=13% Similarity=0.157 Sum_probs=76.3
Q ss_pred CCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCCC-CCCCCeeEEEeccc
Q 005981 275 IRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLP-YPSQAFDLIHCSRC 347 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~Lp-f~d~sFDlVv~s~~ 347 (666)
..+|||||||+|.++..++++ +++++|+ +.++..++... ...+.. ..+...|....+ +..+.||+|++..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~v 257 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTI-HAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDC 257 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHH-HHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHH-HhcCCCCceEEEeCCcccCcccCCCCccEEEEecc
Confidence 679999999999999888754 8999999 77887776433 334443 334455555554 13467999999999
Q ss_pred ccccccCh--HHHHHHHHHhccCCeEEEEEEC
Q 005981 348 RINWTRDD--GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 348 l~h~~~d~--~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++| ++. ..+|+++.++|||||.+++.+.
T Consensus 258 lh~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 258 LHYF-DAREAREVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp GGGS-CHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccC-CHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 8888 443 6899999999999999999864
No 179
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.96 E-value=8.6e-10 Score=111.56 Aligned_cols=117 Identities=17% Similarity=0.118 Sum_probs=77.0
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC------CeEEEeCCcchHHHHHHHHHHHc--CCC-------
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR------NVITMSIAPKDVHENQIQFALER--GAP------- 321 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~------~V~gvDiS~~~l~~a~~~~a~~r--g~~------- 321 (666)
.+++.+.+.+. .....+|||+|||+|.++..++.. +|+|+|+++.++..++....... ++.
T Consensus 38 ~l~~~~l~~~~----~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~ 113 (250)
T 1o9g_A 38 EIFQRALARLP----GDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERR 113 (250)
T ss_dssp HHHHHHHHTSS----CCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc----cCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhh
Confidence 44555554443 124568999999999988877642 79999999999987764332210 110
Q ss_pred --------------------ce-------------EEeecccCCCC-----CCCCeeEEEeccccccccc--------Ch
Q 005981 322 --------------------AM-------------VAAFATRRLPY-----PSQAFDLIHCSRCRINWTR--------DD 355 (666)
Q Consensus 322 --------------------~~-------------~~~~d~e~Lpf-----~d~sFDlVv~s~~l~h~~~--------d~ 355 (666)
.. +...|...... ..++||+|+|+..+++... ..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~ 193 (250)
T 1o9g_A 114 EQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPV 193 (250)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHH
T ss_pred hhhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHH
Confidence 11 44445443211 3458999999866554421 12
Q ss_pred HHHHHHHHHhccCCeEEEEEEC
Q 005981 356 GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 356 ~~~L~el~RvLkPGG~lv~st~ 377 (666)
..++.++.++|+|||+++++..
T Consensus 194 ~~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 194 AGLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp HHHHHHHHHHSCTTCEEEEEES
T ss_pred HHHHHHHHHhcCCCcEEEEeCc
Confidence 4889999999999999999643
No 180
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.95 E-value=1.5e-09 Score=109.66 Aligned_cols=103 Identities=18% Similarity=0.204 Sum_probs=72.9
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHc-------CCC-ceEEeecccC-CC--CCCCC
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALER-------GAP-AMVAAFATRR-LP--YPSQA 338 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~r-------g~~-~~~~~~d~e~-Lp--f~d~s 338 (666)
...+|||||||+|.++..++.. +|+|+|+++.++..++.+....+ ++. ..+...|+.. ++ ++.++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 3468999999999999888753 79999999999887765444321 433 3444455554 55 67889
Q ss_pred eeEEEecccccccccC--------hHHHHHHHHHhccCCeEEEEEEC
Q 005981 339 FDLIHCSRCRINWTRD--------DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 339 FDlVv~s~~l~h~~~d--------~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+|.|+.... -.|... ...++.++.++|+|||.|++.+.
T Consensus 129 ~d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 129 LSKMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp EEEEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred cCEEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 999984321 122100 04799999999999999999763
No 181
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.95 E-value=5.6e-10 Score=112.05 Aligned_cols=123 Identities=15% Similarity=0.149 Sum_probs=91.5
Q ss_pred eeeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhcc----ccccccccCCCCCCCCCccceEEeccccc
Q 005981 519 LRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRG----LIGVMHDWCEPFDTYPRTYDLLHAAGLFS 593 (666)
Q Consensus 519 iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erG----lig~~~~~ce~~~~yp~tyDliha~~~f~ 593 (666)
-.+|||+|||.|.++.+|++.+. .+|+.+| ++.+++.+.++. -+.+.+...+.++.-+.+||+|+|..++.
T Consensus 94 ~~~vLDiG~G~G~~~~~l~~~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 169 (254)
T 1xtp_A 94 TSRALDCGAGIGRITKNLLTKLY----ATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAI 169 (254)
T ss_dssp CSEEEEETCTTTHHHHHTHHHHC----SEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCEEEEECCCcCHHHHHHHHhhc----CEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhh
Confidence 45799999999999999998842 2466666 367888887763 24444444444443238999999999988
Q ss_pred cCCCCCCHHHHHHHhhhcccCCeEEEEEeCh----------------hHHHHHHHHHHhcCcEEEEEec
Q 005981 594 VESKRCNMSTIMLEMDRMLRPGGHVYIRDSI----------------DVMDELQEIGKAMGWHVTLRET 646 (666)
Q Consensus 594 ~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~----------------~~~~~~~~i~~~l~W~~~~~~~ 646 (666)
+..+ -+...+|.++.|+|||||+++|.+.. ...+.+++++++-.+++.....
T Consensus 170 ~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 170 YLTD-ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp GSCH-HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred hCCH-HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 8753 23579999999999999999998631 1257889999999998765543
No 182
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.95 E-value=2.8e-09 Score=109.08 Aligned_cols=109 Identities=18% Similarity=0.112 Sum_probs=81.4
Q ss_pred HHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcC--C-CceEEeeccc
Q 005981 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERG--A-PAMVAAFATR 330 (666)
Q Consensus 259 i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg--~-~~~~~~~d~e 330 (666)
+..+.+.+.. .+..+|||+|||+|.++..++.. +|+++|+++.++..++.+.....+ . ...+...|+.
T Consensus 88 ~~~i~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~ 163 (280)
T 1i9g_A 88 AAQIVHEGDI----FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLA 163 (280)
T ss_dssp HHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGG
T ss_pred HHHHHHHcCC----CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchH
Confidence 4455555531 34579999999999988887652 899999999998887765544312 2 2345555677
Q ss_pred CCCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 331 RLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 331 ~Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.+++++++||+|++. . .++..++.++.++|+|||.+++.++
T Consensus 164 ~~~~~~~~~D~v~~~-----~-~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 164 DSELPDGSVDRAVLD-----M-LAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp GCCCCTTCEEEEEEE-----S-SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred hcCCCCCceeEEEEC-----C-cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 777778899999963 2 4666899999999999999999874
No 183
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.95 E-value=3.1e-09 Score=101.40 Aligned_cols=137 Identities=13% Similarity=0.110 Sum_probs=96.3
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhccc-cccccccCCCCCCCCCccceEEec-cccccCC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRGL-IGVMHDWCEPFDTYPRTYDLLHAA-GLFSVES 596 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erGl-ig~~~~~ce~~~~yp~tyDliha~-~~f~~~~ 596 (666)
.+|||+|||.|.++.+|++.+. +|+.+|. +.+++.+.++.- +.+.+...+.++.-+.+||+|.+. .++.+..
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~ 122 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQGH-----DVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLA 122 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSC
T ss_pred CeEEEECCCCCHHHHHHHHCCC-----cEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcC
Confidence 3699999999999999999976 5666663 567777766632 444444433333223899999998 5666653
Q ss_pred CCCCHHHHHHHhhhcccCCeEEEEEeChh---HHHHHHHHHHhcCcEEEEEeccC-----CCCCceEEEEEEeC
Q 005981 597 KRCNMSTIMLEMDRMLRPGGHVYIRDSID---VMDELQEIGKAMGWHVTLRETAE-----GPHASYRILTADKR 662 (666)
Q Consensus 597 ~~c~~~~~l~E~dRiLRPgG~~ii~d~~~---~~~~~~~i~~~l~W~~~~~~~~~-----~~~~~e~~l~~~k~ 662 (666)
. -....+|.++.|+|||||.+++..... ....+.++++...+++....... ....+.-+++++|+
T Consensus 123 ~-~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 123 E-DGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp H-HHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred h-HHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEecC
Confidence 2 234689999999999999999975433 47888899999999987653321 11345667777774
No 184
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.95 E-value=4.9e-09 Score=105.79 Aligned_cols=107 Identities=12% Similarity=0.114 Sum_probs=78.6
Q ss_pred HHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccC
Q 005981 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR 331 (666)
Q Consensus 259 i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~ 331 (666)
+..+.+.+.. .++.+|||+|||+|.++..++.. +|+++|+++.++..++.+.. ..++. ..+...|+..
T Consensus 82 ~~~i~~~~~~----~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~ 156 (255)
T 3mb5_A 82 AALIVAYAGI----SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIK-WAGFDDRVTIKLKDIYE 156 (255)
T ss_dssp HHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH-HHTCTTTEEEECSCGGG
T ss_pred HHHHHHhhCC----CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHH-HcCCCCceEEEECchhh
Confidence 3445555431 34579999999999988877643 89999999999888775443 34544 3444455543
Q ss_pred CCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 332 LPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 332 Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
. +++++||+|++. . +++..++.++.++|+|||.+++..+
T Consensus 157 ~-~~~~~~D~v~~~-----~-~~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 157 G-IEEENVDHVILD-----L-PQPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp C-CCCCSEEEEEEC-----S-SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred c-cCCCCcCEEEEC-----C-CCHHHHHHHHHHHcCCCCEEEEEEC
Confidence 3 677889999963 2 5667899999999999999999864
No 185
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.94 E-value=1.4e-08 Score=99.57 Aligned_cols=120 Identities=13% Similarity=0.159 Sum_probs=85.7
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCChhHHHhccccccccccCCCCCCCCCccceEEeccccccCCCCC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTLPVIYDRGLIGVMHDWCEPFDTYPRTYDLLHAAGLFSVESKRC 599 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l~~~~erGlig~~~~~ce~~~~yp~tyDliha~~~f~~~~~~c 599 (666)
.+|||+|||.|.++.+|. ..|..+.+.+. -+.+.....+.++.-+.+||+|.|..++. . -
T Consensus 69 ~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~-------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~-~---~ 128 (215)
T 2zfu_A 69 LVVADFGCGDCRLASSIR---NPVHCFDLASL-------------DPRVTVCDMAQVPLEDESVDVAVFCLSLM-G---T 128 (215)
T ss_dssp SCEEEETCTTCHHHHHCC---SCEEEEESSCS-------------STTEEESCTTSCSCCTTCEEEEEEESCCC-S---S
T ss_pred CeEEEECCcCCHHHHHhh---ccEEEEeCCCC-------------CceEEEeccccCCCCCCCEeEEEEehhcc-c---c
Confidence 469999999999999984 23333333322 12233333333332238999999998884 2 3
Q ss_pred CHHHHHHHhhhcccCCeEEEEEeChh---HHHHHHHHHHhcCcEEEEEeccCCCCCceEEEEEEeC
Q 005981 600 NMSTIMLEMDRMLRPGGHVYIRDSID---VMDELQEIGKAMGWHVTLRETAEGPHASYRILTADKR 662 (666)
Q Consensus 600 ~~~~~l~E~dRiLRPgG~~ii~d~~~---~~~~~~~i~~~l~W~~~~~~~~~~~~~~e~~l~~~k~ 662 (666)
+...+|.|+.|+|||||+++|.+... ..+.+..+++...+++...+...+ ...+++++|.
T Consensus 129 ~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~---~~~~~~~~k~ 191 (215)
T 2zfu_A 129 NIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLTNS---HFFLFDFQKT 191 (215)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEECCST---TCEEEEEEEC
T ss_pred CHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEecCCC---eEEEEEEEec
Confidence 56899999999999999999997655 468899999999999876654332 4578888884
No 186
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.93 E-value=1.8e-09 Score=108.12 Aligned_cols=113 Identities=16% Similarity=0.205 Sum_probs=77.6
Q ss_pred HHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHcCCC---ceEEe
Q 005981 255 ADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAP---AMVAA 326 (666)
Q Consensus 255 ~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~rg~~---~~~~~ 326 (666)
...++..+..... ..+..+|||||||+|..+..|+. .+|+++|+++.++..++..+ ...++. ..+..
T Consensus 41 ~~~~l~~l~~~~~----~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~g~~~~~i~~~~ 115 (221)
T 3dr5_A 41 TGQLLTTLAATTN----GNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALF-REAGYSPSRVRFLL 115 (221)
T ss_dssp HHHHHHHHHHHSC----CTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHH-HHTTCCGGGEEEEC
T ss_pred HHHHHHHHHHhhC----CCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCcCcEEEEE
Confidence 3344555554433 12234899999999988887765 28999999999998887544 445554 23344
Q ss_pred ecccC-CC-CCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 327 FATRR-LP-YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 327 ~d~e~-Lp-f~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
.++.+ ++ +++++||+|++... ..+...++.++.++|||||++++..
T Consensus 116 gda~~~l~~~~~~~fD~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 116 SRPLDVMSRLANDSYQLVFGQVS----PMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp SCHHHHGGGSCTTCEEEEEECCC----TTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred cCHHHHHHHhcCCCcCeEEEcCc----HHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 44322 32 33689999997532 2445679999999999999999863
No 187
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.93 E-value=5e-09 Score=101.63 Aligned_cols=92 Identities=13% Similarity=0.181 Sum_probs=65.1
Q ss_pred CCCeEEEECCCCchhHHHhcc------CCeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCC--------------
Q 005981 274 HIRVVMDAGCGVASFGAYLLP------RNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP-------------- 333 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~------~~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lp-------------- 333 (666)
+..+|||+|||+|.++..+++ .+|+|+|+++... .....+...|+..++
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~-----------~~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDP-----------IPNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCC-----------CTTCEEEECCTTTTSSCCC----------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCC-----------CCCceEEEccccchhhhhhcccccccccc
Confidence 347899999999999888764 2699999998321 012234445555555
Q ss_pred -----------CCCCCeeEEEeccccccccc----Ch-------HHHHHHHHHhccCCeEEEEEEC
Q 005981 334 -----------YPSQAFDLIHCSRCRINWTR----DD-------GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 334 -----------f~d~sFDlVv~s~~l~h~~~----d~-------~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++++||+|+|..+ .|+.. +. ..+++++.++|||||.|++...
T Consensus 91 ~~~~~~~~~~~~~~~~fD~v~~~~~-~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 91 NNSVDYKLKEILQDKKIDIILSDAA-VPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp -CHHHHHHHHHHTTCCEEEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred chhhHHHHHhhcCCCcccEEEeCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 56679999998765 44421 11 1378899999999999999754
No 188
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.93 E-value=3.1e-10 Score=114.75 Aligned_cols=92 Identities=13% Similarity=0.173 Sum_probs=59.6
Q ss_pred CCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCCceEE-eec-----ccCCCCCCCCeeEEEe
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVA-AFA-----TRRLPYPSQAFDLIHC 344 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~-~~d-----~e~Lpf~d~sFDlVv~ 344 (666)
...+|||||||+|.++..|++. +|+|+|+++.|+..+.. +....... ..+ ...++ ...||.+.+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~~ 109 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIR-----SDERVVVMEQFNFRNAVLADFE--QGRPSFTSI 109 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHH-----TCTTEEEECSCCGGGCCGGGCC--SCCCSEEEE
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHH-----hCccccccccceEEEeCHhHcC--cCCCCEEEE
Confidence 4579999999999999888865 79999999999865432 21111100 001 11221 112344443
Q ss_pred cccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 345 SRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 345 s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
..++.++ ..+|.++.|+|||||.+++..
T Consensus 110 D~v~~~l----~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 110 DVSFISL----DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp CCSSSCG----GGTHHHHHHHSCTTCEEEEEE
T ss_pred EEEhhhH----HHHHHHHHHhccCCCEEEEEE
Confidence 3332222 779999999999999999974
No 189
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.93 E-value=1.2e-09 Score=108.52 Aligned_cols=100 Identities=17% Similarity=0.222 Sum_probs=71.5
Q ss_pred CCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccC-CCC-C----CCCeeE
Q 005981 275 IRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LPY-P----SQAFDL 341 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~-Lpf-~----d~sFDl 341 (666)
..+|||||||+|..+..++.. +|+++|+++.++..++.+.. ..++. ..+...|+.. ++. . .++||+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLN-FAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH-HHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHH-HcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 478999999999999888763 89999999999988775444 34443 2344444322 332 1 278999
Q ss_pred EEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 342 Vv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
|++.....++ .+...++.++ ++|||||.+++...
T Consensus 138 V~~d~~~~~~-~~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 138 VFLDHWKDRY-LPDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp EEECSCGGGH-HHHHHHHHHT-TCCCTTCEEEESCC
T ss_pred EEEcCCcccc-hHHHHHHHhc-cccCCCeEEEEeCC
Confidence 9987654554 3444667777 99999999998754
No 190
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.93 E-value=7.1e-09 Score=108.49 Aligned_cols=102 Identities=16% Similarity=0.119 Sum_probs=70.5
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHc-----CCCceEEeecccC-CCCCCCCeeEEE
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALER-----GAPAMVAAFATRR-LPYPSQAFDLIH 343 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~r-----g~~~~~~~~d~e~-Lpf~d~sFDlVv 343 (666)
.+++|||||||+|.++..+++. +|+++|+++.++..++..+.... .....+...|... +...+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 4679999999999999988875 79999999999988876544321 1122344444333 344568999999
Q ss_pred ecccccccccCh----HHHHHHHHHhccCCeEEEEEE
Q 005981 344 CSRCRINWTRDD----GILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 344 ~s~~l~h~~~d~----~~~L~el~RvLkPGG~lv~st 376 (666)
+... .++.... ..+++++.++|||||.+++.+
T Consensus 163 ~D~~-~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 163 SDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp ECC-----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCC-CccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 7543 3432221 579999999999999999975
No 191
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.93 E-value=1.4e-09 Score=110.02 Aligned_cols=103 Identities=19% Similarity=0.226 Sum_probs=77.0
Q ss_pred HHhcccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhc----cc--cccccccCCCCCCCC-
Q 005981 509 VRALHWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDR----GL--IGVMHDWCEPFDTYP- 580 (666)
Q Consensus 509 ~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~er----Gl--ig~~~~~ce~~~~yp- 580 (666)
.+.++... -.+|||+|||.|.++..|++++. .|+.+| ++.+++.+.++ |+ +.+.....+.++ +|
T Consensus 30 ~~~l~~~~--~~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~-~~~ 101 (260)
T 1vl5_A 30 MQIAALKG--NEEVLDVATGGGHVANAFAPFVK-----KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-FTD 101 (260)
T ss_dssp HHHHTCCS--CCEEEEETCTTCHHHHHHGGGSS-----EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-SCT
T ss_pred HHHhCCCC--CCEEEEEeCCCCHHHHHHHHhCC-----EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC-CCC
Confidence 34444443 34699999999999999999864 666677 35777777664 44 444444445444 44
Q ss_pred CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 581 RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 581 ~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
.+||+|+|..++.+..+ ...+|.|+.|+|||||++++.+
T Consensus 102 ~~fD~V~~~~~l~~~~d---~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPN---PASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp TCEEEEEEESCGGGCSC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEEEEhhhhHhcCC---HHHHHHHHHHHcCCCCEEEEEE
Confidence 89999999988888764 4799999999999999999974
No 192
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.93 E-value=6.7e-09 Score=102.61 Aligned_cols=112 Identities=17% Similarity=0.206 Sum_probs=84.2
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhccccccccccCCCCCCCCCccceEEeccccccCCCC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRGLIGVMHDWCEPFDTYPRTYDLLHAAGLFSVESKR 598 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erGlig~~~~~ce~~~~yp~tyDliha~~~f~~~~~~ 598 (666)
.+|||+|||.|.++..|++. +.+| ++.+++.+.++++ .+.....+.++.-+.+||+|.+..++.+..+
T Consensus 49 ~~vLDiG~G~G~~~~~l~~~---------~~vD~s~~~~~~a~~~~~-~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~- 117 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKIK---------IGVEPSERMAEIARKRGV-FVLKGTAENLPLKDESFDFALMVTTICFVDD- 117 (219)
T ss_dssp SCEEEETCTTSTTHHHHTCC---------EEEESCHHHHHHHHHTTC-EEEECBTTBCCSCTTCEEEEEEESCGGGSSC-
T ss_pred CcEEEeCCCCCHHHHHHHHH---------hccCCCHHHHHHHHhcCC-EEEEcccccCCCCCCCeeEEEEcchHhhccC-
Confidence 36999999999999999875 3344 3578888888854 3333333444422379999999998887753
Q ss_pred CCHHHHHHHhhhcccCCeEEEEEeCh------------------------hHHHHHHHHHHhcCcEEEEE
Q 005981 599 CNMSTIMLEMDRMLRPGGHVYIRDSI------------------------DVMDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 599 c~~~~~l~E~dRiLRPgG~~ii~d~~------------------------~~~~~~~~i~~~l~W~~~~~ 644 (666)
...+|.++.|+|||||++++.+.. -..+.+++++++..+++...
T Consensus 118 --~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 185 (219)
T 1vlm_A 118 --PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKV 185 (219)
T ss_dssp --HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred --HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEE
Confidence 479999999999999999997421 13578889999999987544
No 193
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.92 E-value=8.6e-10 Score=119.94 Aligned_cols=142 Identities=11% Similarity=0.121 Sum_probs=103.3
Q ss_pred hhhhhhHhHHHHHHHHHHh----cccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhccccc
Q 005981 493 LFKAESKYWNEIIESYVRA----LHWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRGLIG 567 (666)
Q Consensus 493 ~f~~d~~~w~~~v~~Y~~~----l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erGlig 567 (666)
.+...+..|.++...+.+. +++..+ ..|||+|||.|.++.+|+++|. +|+.+| ++++++.+.++|+-.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~VLDiGcG~G~~~~~l~~~g~-----~v~gvD~s~~~~~~a~~~~~~~ 152 (416)
T 4e2x_A 80 YHSSGSSVMREHFAMLARDFLATELTGPD--PFIVEIGCNDGIMLRTIQEAGV-----RHLGFEPSSGVAAKAREKGIRV 152 (416)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHHTTTCSSS--CEEEEETCTTTTTHHHHHHTTC-----EEEEECCCHHHHHHHHTTTCCE
T ss_pred CcCcCCHHHHHHHHHHHHHHHHHhCCCCC--CEEEEecCCCCHHHHHHHHcCC-----cEEEECCCHHHHHHHHHcCCCc
Confidence 3445556677776666543 233333 4699999999999999999976 677777 468999999997622
Q ss_pred cc----cccCCCCCCCC-CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh----------h-------
Q 005981 568 VM----HDWCEPFDTYP-RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI----------D------- 625 (666)
Q Consensus 568 ~~----~~~ce~~~~yp-~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~----------~------- 625 (666)
.. .+..+.++ ++ .+||+|.+.++|.|.. +...+|.|+.|+|||||+++|.... .
T Consensus 153 ~~~~~~~~~~~~l~-~~~~~fD~I~~~~vl~h~~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~ 228 (416)
T 4e2x_A 153 RTDFFEKATADDVR-RTEGPANVIYAANTLCHIP---YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHF 228 (416)
T ss_dssp ECSCCSHHHHHHHH-HHHCCEEEEEEESCGGGCT---THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCC
T ss_pred ceeeechhhHhhcc-cCCCCEEEEEECChHHhcC---CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhh
Confidence 11 11111112 23 8999999999999986 4589999999999999999997431 0
Q ss_pred ---HHHHHHHHHHhcCcEEEEEe
Q 005981 626 ---VMDELQEIGKAMGWHVTLRE 645 (666)
Q Consensus 626 ---~~~~~~~i~~~l~W~~~~~~ 645 (666)
..+.++.++++-.+++....
T Consensus 229 ~~~s~~~l~~ll~~aGf~~~~~~ 251 (416)
T 4e2x_A 229 FLFSATSVQGMAQRCGFELVDVQ 251 (416)
T ss_dssp EECCHHHHHHHHHHTTEEEEEEE
T ss_pred hcCCHHHHHHHHHHcCCEEEEEE
Confidence 14689999999999876544
No 194
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.92 E-value=5.2e-09 Score=103.64 Aligned_cols=96 Identities=15% Similarity=0.102 Sum_probs=71.5
Q ss_pred CCCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHcCC------CceEEeecccCCCCCCCCeeEE
Q 005981 274 HIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGA------PAMVAAFATRRLPYPSQAFDLI 342 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~rg~------~~~~~~~d~e~Lpf~d~sFDlV 342 (666)
+..+|||||||+|.++..+++ .+|+++|+++.++..++..... .+. ...+...|....+..+++||+|
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i 155 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRK-DDPTLLSSGRVQLVVGDGRMGYAEEAPYDAI 155 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH-HCTHHHHTSSEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh-hcccccCCCcEEEEECCcccCcccCCCcCEE
Confidence 457999999999998887764 2799999999998877654433 221 2334445555555456789999
Q ss_pred EecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 343 HCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 343 v~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++...+.++ +.++.++|||||.++++..
T Consensus 156 ~~~~~~~~~-------~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 156 HVGAAAPVV-------PQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EECSBBSSC-------CHHHHHTEEEEEEEEEEES
T ss_pred EECCchHHH-------HHHHHHhcCCCcEEEEEEe
Confidence 988765544 3688999999999999864
No 195
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.92 E-value=6.5e-10 Score=126.47 Aligned_cols=102 Identities=13% Similarity=0.052 Sum_probs=79.9
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcC-CCceEEeecccCC--CCCCCCeeEEEecccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERG-APAMVAAFATRRL--PYPSQAFDLIHCSRCR 348 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg-~~~~~~~~d~e~L--pf~d~sFDlVv~s~~l 348 (666)
++.+|||||||+|.++..|+.. +|+|+|+++.++..|+. .|.+.+ +...+...+++++ .+.+++||+|+|..++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRA-LAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHH-HHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 4568999999999999999977 99999999999988864 555555 4455666667776 4667899999999999
Q ss_pred cccccChH--HHHHHHHHhccCCeEEEEEEC
Q 005981 349 INWTRDDG--ILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 349 ~h~~~d~~--~~L~el~RvLkPGG~lv~st~ 377 (666)
+|. .++. ..+..+.+.|+++|..++.+.
T Consensus 145 ehv-~~~~~~~~~~~~~~tl~~~~~~~~~~~ 174 (569)
T 4azs_A 145 HHI-VHLHGIDEVKRLLSRLADVTQAVILEL 174 (569)
T ss_dssp HHH-HHHHCHHHHHHHHHHHHHHSSEEEEEC
T ss_pred hcC-CCHHHHHHHHHHHHHhccccceeeEEe
Confidence 998 5554 445667888888887766653
No 196
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.91 E-value=3.8e-09 Score=112.40 Aligned_cols=99 Identities=23% Similarity=0.341 Sum_probs=74.7
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCCCCCCCCeeEEEeccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSRC 347 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~Lpf~d~sFDlVv~s~~ 347 (666)
+..+|||||||+|.++..+++. +++++|+ +.++..++.+.. ..++. ..+...|..+ +++. .||+|++..+
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 258 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLK-DEGLSDRVDVVEGDFFE-PLPR-KADAIILSFV 258 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHH-HTTCTTTEEEEECCTTS-CCSS-CEEEEEEESC
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHH-hcCCCCceEEEeCCCCC-CCCC-CccEEEEccc
Confidence 4579999999999998888754 7889999 888877765443 34443 3444445433 3443 4999999999
Q ss_pred ccccccCh--HHHHHHHHHhccCCeEEEEEEC
Q 005981 348 RINWTRDD--GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 348 l~h~~~d~--~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++| ++. ..+++++.++|||||.+++.+.
T Consensus 259 l~~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~ 289 (360)
T 1tw3_A 259 LLNW-PDHDAVRILTRCAEALEPGGRILIHER 289 (360)
T ss_dssp GGGS-CHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ccCC-CHHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 8888 444 4899999999999999999875
No 197
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.91 E-value=2.1e-09 Score=109.27 Aligned_cols=104 Identities=26% Similarity=0.330 Sum_probs=77.0
Q ss_pred HHHhcccCCCceeeEeeccccchHHHHHHhhC-CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCCCCC
Q 005981 508 YVRALHWKKMKLRNVLDMRAGFGGFAAALIEQ-KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEPFDT 578 (666)
Q Consensus 508 Y~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~-~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~~~~ 578 (666)
..+.+++..+ .+|||+|||.|.++.+|+++ ++ +|+.+|. +.+++.+.++ |+ +.+.+...+.++
T Consensus 53 l~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 124 (273)
T 3bus_A 53 MIALLDVRSG--DRVLDVGCGIGKPAVRLATARDV-----RVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP- 124 (273)
T ss_dssp HHHHSCCCTT--CEEEEESCTTSHHHHHHHHHSCC-----EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-
T ss_pred HHHhcCCCCC--CEEEEeCCCCCHHHHHHHHhcCC-----EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC-
Confidence 3445555444 46999999999999999885 65 5566663 5667666554 54 444444444444
Q ss_pred CC-CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 579 YP-RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 579 yp-~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
++ .+||+|++.++|.+..+. ..+|.|+.|+|||||+++|.+
T Consensus 125 ~~~~~fD~v~~~~~l~~~~~~---~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 125 FEDASFDAVWALESLHHMPDR---GRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp SCTTCEEEEEEESCTTTSSCH---HHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCCccEEEEechhhhCCCH---HHHHHHHHHHcCCCeEEEEEE
Confidence 44 899999999999887654 799999999999999999975
No 198
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.91 E-value=9.8e-09 Score=109.38 Aligned_cols=116 Identities=15% Similarity=0.122 Sum_probs=78.3
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHH-cCC---CceEEeecccCC-C-CCCCCeeEEE
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE-RGA---PAMVAAFATRRL-P-YPSQAFDLIH 343 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~-rg~---~~~~~~~d~e~L-p-f~d~sFDlVv 343 (666)
...+|||||||+|.++..+++. +|+++|+++.++..++..+... .++ ...+...|.... + +++++||+|+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 4579999999999999999865 7999999999998877554431 121 234444453332 2 3457899999
Q ss_pred ecccccccc--cC--hHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHH
Q 005981 344 CSRCRINWT--RD--DGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHW 390 (666)
Q Consensus 344 ~s~~l~h~~--~d--~~~~L~el~RvLkPGG~lv~st~P~~~~~~el~~~w 390 (666)
+... .++. .+ ...+++++.++|+|||.+++.....+.........+
T Consensus 200 ~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~ 249 (334)
T 1xj5_A 200 VDSS-DPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIV 249 (334)
T ss_dssp ECCC-CTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHH
T ss_pred ECCC-CccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHH
Confidence 7543 2221 11 258999999999999999997433344433333333
No 199
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.91 E-value=2e-09 Score=110.40 Aligned_cols=94 Identities=11% Similarity=0.161 Sum_probs=74.1
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhcc-ccccccccCCCCCCCCCccceEEeccccccCCC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRG-LIGVMHDWCEPFDTYPRTYDLLHAAGLFSVESK 597 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erG-lig~~~~~ce~~~~yp~tyDliha~~~f~~~~~ 597 (666)
.+|||+|||.|.++.+|++.+. +|+.+| ++.+++.+.++. -+.+.....+.++ ++.+||+|++..++.+..+
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~d 132 (279)
T 3ccf_A 59 EFILDLGCGTGQLTEKIAQSGA-----EVLGTDNAATMIEKARQNYPHLHFDVADARNFR-VDKPLDAVFSNAMLHWVKE 132 (279)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHCTTSCEEECCTTTCC-CSSCEEEEEEESCGGGCSC
T ss_pred CEEEEecCCCCHHHHHHHhCCC-----eEEEEECCHHHHHHHHhhCCCCEEEECChhhCC-cCCCcCEEEEcchhhhCcC
Confidence 4699999999999999999876 566666 367888887763 1444444445554 4789999999998887654
Q ss_pred CCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 598 RCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 598 ~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
...+|.|+.|+|||||++++..
T Consensus 133 ---~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 133 ---PEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp ---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---HHHHHHHHHHhcCCCcEEEEEe
Confidence 5799999999999999999973
No 200
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.91 E-value=2e-09 Score=110.65 Aligned_cols=117 Identities=20% Similarity=0.252 Sum_probs=84.3
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc-cccccccCCCCCCCCCccceEEeccccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL-IGVMHDWCEPFDTYPRTYDLLHAAGLFS 593 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl-ig~~~~~ce~~~~yp~tyDliha~~~f~ 593 (666)
..|||+|||.|.++.+|+++|. +|+.+|. +.+++.+.++ |+ +.+...-.+.++. +.+||+|.|..+|.
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~g~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLLGY-----DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFM 195 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGG
T ss_pred CcEEEECCCCCHHHHHHHHCCC-----eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchh
Confidence 4599999999999999999987 5666663 5666655544 54 4444444334443 68999999999998
Q ss_pred cCCCCCCHHHHHHHhhhcccCCeEEEEEeCh--------------hHHHHHHHHHHhcCcEEEEEe
Q 005981 594 VESKRCNMSTIMLEMDRMLRPGGHVYIRDSI--------------DVMDELQEIGKAMGWHVTLRE 645 (666)
Q Consensus 594 ~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~--------------~~~~~~~~i~~~l~W~~~~~~ 645 (666)
+... -.+..+|.++.|+|||||+++|.... -..+.+++++.. |++....
T Consensus 196 ~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~ 258 (286)
T 3m70_A 196 FLNR-ERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEYN 258 (286)
T ss_dssp GSCG-GGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred hCCH-HHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEEE
Confidence 7753 35679999999999999998775211 114567777776 8876553
No 201
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.91 E-value=5.4e-09 Score=108.17 Aligned_cols=118 Identities=14% Similarity=0.089 Sum_probs=78.7
Q ss_pred cHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeC-CcchHHHHHHHHH----HHcCCC----
Q 005981 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSI-APKDVHENQIQFA----LERGAP---- 321 (666)
Q Consensus 254 g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDi-S~~~l~~a~~~~a----~~rg~~---- 321 (666)
+.....+.+.+.... ..+.+|||||||+|.++..++.. +|+++|+ ++.++..++.+.. ...++.
T Consensus 63 ~~~~l~~~l~~~~~~----~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~ 138 (281)
T 3bzb_A 63 GARALADTLCWQPEL----IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKR 138 (281)
T ss_dssp HHHHHHHHHHHCGGG----TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------
T ss_pred HHHHHHHHHHhcchh----cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCC
Confidence 444555555554431 23479999999999988887754 7999999 8988887765442 222321
Q ss_pred --ceEEeecccC----CC--CCCCCeeEEEecccccccccChHHHHHHHHHhcc---C--CeEEEEEE
Q 005981 322 --AMVAAFATRR----LP--YPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLR---A--GGYFAWAA 376 (666)
Q Consensus 322 --~~~~~~d~e~----Lp--f~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLk---P--GG~lv~st 376 (666)
..+...+... +. +++++||+|+++.++++. .+...+++++.++|+ | ||.+++..
T Consensus 139 ~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~-~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 139 ASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFH-QAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCG-GGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred CCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccCh-HHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 2222222111 11 035789999998886665 778899999999999 9 99877764
No 202
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.90 E-value=3.7e-09 Score=105.89 Aligned_cols=108 Identities=14% Similarity=0.161 Sum_probs=76.0
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhcc---CCeEEEeCCcchHHHHHHHHHHHcCCCc-eEEeecccCC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP---RNVITMSIAPKDVHENQIQFALERGAPA-MVAAFATRRL 332 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~---~~V~gvDiS~~~l~~a~~~~a~~rg~~~-~~~~~d~e~L 332 (666)
.....+.+.+.. .+..+|||||||+|.++..+++ .+|+++|+++.++..++.... ..++.. .+...+. ..
T Consensus 78 ~~~~~~~~~l~~----~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~~d~-~~ 151 (235)
T 1jg1_A 78 HMVAIMLEIANL----KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLE-RAGVKNVHVILGDG-SK 151 (235)
T ss_dssp HHHHHHHHHHTC----CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHH-HTTCCSEEEEESCG-GG
T ss_pred HHHHHHHHhcCC----CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHH-HcCCCCcEEEECCc-cc
Confidence 344555555531 3457899999999999888876 489999999998877765443 344433 3344443 34
Q ss_pred CCCCC-CeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 333 PYPSQ-AFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 333 pf~d~-sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++++ .||+|++...+.++. .++.++|||||.++++..
T Consensus 152 ~~~~~~~fD~Ii~~~~~~~~~-------~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 152 GFPPKAPYDVIIVTAGAPKIP-------EPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp CCGGGCCEEEEEECSBBSSCC-------HHHHHTEEEEEEEEEEEC
T ss_pred CCCCCCCccEEEECCcHHHHH-------HHHHHhcCCCcEEEEEEe
Confidence 45544 499999887766552 378999999999999864
No 203
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.90 E-value=1.9e-09 Score=111.27 Aligned_cols=116 Identities=21% Similarity=0.257 Sum_probs=85.4
Q ss_pred eeEeeccccchHHHHHHhhC-CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCCCCCCCCccceEEecc
Q 005981 520 RNVLDMRAGFGGFAAALIEQ-KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEPFDTYPRTYDLLHAAG 590 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~-~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~~~~yp~tyDliha~~ 590 (666)
..|||+|||.|.++..|++. |+ +|+.+|. +.+++.+.++ |+ +.+.+...+.++.-+.+||+|++.+
T Consensus 84 ~~vLDiGcG~G~~~~~l~~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 84 AKGLDLGAGYGGAARFLVRKFGV-----SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQD 158 (297)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCC-----EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CEEEEeCCCCCHHHHHHHHHhCC-----EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecc
Confidence 46999999999999999987 76 5666663 5677766654 44 4555555455442238999999999
Q ss_pred ccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh-------h---------------HHHHHHHHHHhcCcEEEE
Q 005981 591 LFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI-------D---------------VMDELQEIGKAMGWHVTL 643 (666)
Q Consensus 591 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~-------~---------------~~~~~~~i~~~l~W~~~~ 643 (666)
++.|..+ ...+|.|+.|+|||||++++.+.. . ....+.++++.-.+++..
T Consensus 159 ~l~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 230 (297)
T 2o57_A 159 AFLHSPD---KLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLR 230 (297)
T ss_dssp CGGGCSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEE
T ss_pred hhhhcCC---HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEE
Confidence 9998876 589999999999999999998521 0 234566677777777543
No 204
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.90 E-value=2.5e-09 Score=117.56 Aligned_cols=115 Identities=11% Similarity=0.006 Sum_probs=78.2
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHH--HH----HHHHHcC--CCc-
Q 005981 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHEN--QI----QFALERG--APA- 322 (666)
Q Consensus 256 ~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a--~~----~~a~~rg--~~~- 322 (666)
...+..+++.+.. ..+.+|||||||+|.++..++.. +|+|+|+++.++..| |. +.+...| ...
T Consensus 228 p~~v~~ml~~l~l----~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV 303 (433)
T 1u2z_A 228 PNFLSDVYQQCQL----KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNV 303 (433)
T ss_dssp HHHHHHHHHHTTC----CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCE
T ss_pred HHHHHHHHHhcCC----CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCce
Confidence 3445566665541 35579999999999999888763 699999999988766 22 2233345 222
Q ss_pred eEEeec-ccC-CCC--CCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 323 MVAAFA-TRR-LPY--PSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 323 ~~~~~d-~e~-Lpf--~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
.+...+ ... .++ ..++||+|+++.++ +.++...+|.++.++|||||.+++..
T Consensus 304 ~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l--~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 304 EFSLKKSFVDNNRVAELIPQCDVILVNNFL--FDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp EEEESSCSTTCHHHHHHGGGCSEEEECCTT--CCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred EEEEcCccccccccccccCCCCEEEEeCcc--ccccHHHHHHHHHHhCCCCeEEEEee
Confidence 233322 211 112 24789999987654 33667788999999999999998874
No 205
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.90 E-value=1.1e-09 Score=118.77 Aligned_cols=104 Identities=11% Similarity=0.055 Sum_probs=75.0
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCC------CchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHcCCCceEE
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCG------VASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAPAMVA 325 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCG------tG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~ 325 (666)
.+.+++++.+. .+..+||||||| +|..+..+.. .+|+|+|+++.|. .......+.
T Consensus 204 ~~Ye~lL~~l~-----~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv 269 (419)
T 3sso_A 204 PHYDRHFRDYR-----NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTI 269 (419)
T ss_dssp HHHHHHHGGGT-----TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEE
T ss_pred HHHHHHHHhhc-----CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEE
Confidence 34444444443 245799999999 6654444432 3899999999863 122234566
Q ss_pred eecccCCCCC------CCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 326 AFATRRLPYP------SQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 326 ~~d~e~Lpf~------d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
..|+.++++. +++||+|+|.. .+++ .+...+|+++.|+|||||+|++..
T Consensus 270 ~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~-~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 270 QGDQNDAEFLDRIARRYGPFDIVIDDG-SHIN-AHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp ECCTTCHHHHHHHHHHHCCEEEEEECS-CCCH-HHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EecccccchhhhhhcccCCccEEEECC-cccc-hhHHHHHHHHHHhcCCCeEEEEEe
Confidence 6678888776 68999999864 3554 677899999999999999999985
No 206
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.90 E-value=3.8e-09 Score=105.95 Aligned_cols=97 Identities=7% Similarity=0.101 Sum_probs=73.5
Q ss_pred CCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccC-CC-CCCCCeeEEEecc
Q 005981 275 IRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LP-YPSQAFDLIHCSR 346 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~-Lp-f~d~sFDlVv~s~ 346 (666)
..+|||||||+|.++..++.. +|+++|+++.++..++... ...++. ..+...++.. ++ ..+++||+|++..
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNL-ATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHH-HHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 479999999999999988873 8999999999998877544 444543 3444445433 33 3368999999653
Q ss_pred cccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 347 CRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 347 ~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
. ..+...++.++.++|||||++++..
T Consensus 151 ~----~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 151 A----KAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp T----SSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred c----HHHHHHHHHHHHHhcCCCeEEEEee
Confidence 2 3556789999999999999998864
No 207
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.89 E-value=5.6e-09 Score=103.89 Aligned_cols=110 Identities=14% Similarity=0.218 Sum_probs=76.2
Q ss_pred HHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhcc----------CCeEEEeCCcchHHHHHHHHHHHc-----CCCc
Q 005981 258 YLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP----------RNVITMSIAPKDVHENQIQFALER-----GAPA 322 (666)
Q Consensus 258 ~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~----------~~V~gvDiS~~~l~~a~~~~a~~r-----g~~~ 322 (666)
+...+.+.+.... .+..+|||||||+|.++..+++ .+|+++|+++.++..++....... ....
T Consensus 70 ~~~~~~~~l~~~~--~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v 147 (227)
T 1r18_A 70 MHAFALEYLRDHL--KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQL 147 (227)
T ss_dssp HHHHHHHHTTTTC--CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSE
T ss_pred HHHHHHHHHHhhC--CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCce
Confidence 3445555553111 3457999999999998887765 279999999999888775544321 1123
Q ss_pred eEEeecccCCCCCC-CCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 323 MVAAFATRRLPYPS-QAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 323 ~~~~~d~e~Lpf~d-~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.+...|... ++++ ++||+|++...+.++ +.++.++|||||.+++...
T Consensus 148 ~~~~~d~~~-~~~~~~~fD~I~~~~~~~~~-------~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 148 LIVEGDGRK-GYPPNAPYNAIHVGAAAPDT-------PTELINQLASGGRLIVPVG 195 (227)
T ss_dssp EEEESCGGG-CCGGGCSEEEEEECSCBSSC-------CHHHHHTEEEEEEEEEEES
T ss_pred EEEECCccc-CCCcCCCccEEEECCchHHH-------HHHHHHHhcCCCEEEEEEe
Confidence 344445444 4444 789999988776554 2788999999999999864
No 208
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.89 E-value=2.9e-09 Score=107.22 Aligned_cols=119 Identities=13% Similarity=0.135 Sum_probs=91.3
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhccc---cccccccCCCCCCCCCccceEEeccccccC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRGL---IGVMHDWCEPFDTYPRTYDLLHAAGLFSVE 595 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erGl---ig~~~~~ce~~~~yp~tyDliha~~~f~~~ 595 (666)
..|||+|||.|.++.+|++.+.. +|+.+|. +.+++.+.++.- +.+...-.+.++.-+.+||+|.|..++.+.
T Consensus 46 ~~vLD~GcG~G~~~~~l~~~~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 121 (253)
T 3g5l_A 46 KTVLDLGCGFGWHCIYAAEHGAK----KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYI 121 (253)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS----EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred CEEEEECCCCCHHHHHHHHcCCC----EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhh
Confidence 56999999999999999999752 5666663 678888887742 444444445555324899999999998887
Q ss_pred CCCCCHHHHHHHhhhcccCCeEEEEEeChh----------------------------------------------HHHH
Q 005981 596 SKRCNMSTIMLEMDRMLRPGGHVYIRDSID----------------------------------------------VMDE 629 (666)
Q Consensus 596 ~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~----------------------------------------------~~~~ 629 (666)
.+ ...+|.++.|+|||||.+++..... ..+.
T Consensus 122 ~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 198 (253)
T 3g5l_A 122 AS---FDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTT 198 (253)
T ss_dssp SC---HHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHHH
T ss_pred hh---HHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHHH
Confidence 43 5899999999999999999972110 5678
Q ss_pred HHHHHHhcCcEEEEEe
Q 005981 630 LQEIGKAMGWHVTLRE 645 (666)
Q Consensus 630 ~~~i~~~l~W~~~~~~ 645 (666)
+.+++++-.+++....
T Consensus 199 ~~~~l~~aGF~~~~~~ 214 (253)
T 3g5l_A 199 YIQTLLKNGFQINSVI 214 (253)
T ss_dssp HHHHHHHTTEEEEEEE
T ss_pred HHHHHHHcCCeeeeee
Confidence 8899999999876554
No 209
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.89 E-value=1.3e-09 Score=110.83 Aligned_cols=94 Identities=19% Similarity=0.233 Sum_probs=72.6
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhccccccccccCCCCCCCCCccceEEeccccccCCCC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRGLIGVMHDWCEPFDTYPRTYDLLHAAGLFSVESKR 598 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erGlig~~~~~ce~~~~yp~tyDliha~~~f~~~~~~ 598 (666)
..|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++.-+.+.+.-++.++.-+.+||+|||..++.+..
T Consensus 36 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~-- 108 (261)
T 3ege_A 36 SVIADIGAGTGGYSVALANQGL-----FVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILAIHHFS-- 108 (261)
T ss_dssp CEEEEETCTTSHHHHHHHTTTC-----EEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESCGGGCS--
T ss_pred CEEEEEcCcccHHHHHHHhCCC-----EEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcchHhhcc--
Confidence 4699999999999999999876 5666663 4566665555445555666666553348999999999988874
Q ss_pred CCHHHHHHHhhhcccCCeEEEEEe
Q 005981 599 CNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 599 c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
+...+|.|+.|+|| ||++++.+
T Consensus 109 -~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 109 -HLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp -SHHHHHHHHHHHBC-SSCEEEEE
T ss_pred -CHHHHHHHHHHHhC-CcEEEEEE
Confidence 45899999999999 99888863
No 210
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.89 E-value=5.3e-09 Score=101.88 Aligned_cols=127 Identities=11% Similarity=0.120 Sum_probs=87.2
Q ss_pred eEeeccccchHHHHHHhhC--CCceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCCCCCCccceEEeccc
Q 005981 521 NVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFDTYPRTYDLLHAAGL 591 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~~yp~tyDliha~~~ 591 (666)
.|||+|||.|.++.+|+.. +. +|+.+|. +.+++.+.++ |+ +.+.+...+.+. -+.+||+|.+..+
T Consensus 68 ~vLDiG~G~G~~~~~l~~~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~ 141 (207)
T 1jsx_A 68 RFIDVGTGPGLPGIPLSIVRPEA-----HFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAF 141 (207)
T ss_dssp EEEEETCTTTTTHHHHHHHCTTS-----EEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCS
T ss_pred eEEEECCCCCHHHHHHHHHCCCC-----EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEecc
Confidence 6999999999999999876 44 5666663 4666666553 54 445544433333 1378999998642
Q ss_pred cccCCCCCCHHHHHHHhhhcccCCeEEEEEeChhHHHHHHHHHHhcCcEEEEEe--ccCCCCCceEEEEEEeC
Q 005981 592 FSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSIDVMDELQEIGKAMGWHVTLRE--TAEGPHASYRILTADKR 662 (666)
Q Consensus 592 f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~~~~~~~~i~~~l~W~~~~~~--~~~~~~~~e~~l~~~k~ 662 (666)
..+..++.++.|+|||||++++.......+.++++.+ .|+..... .-........+++++|+
T Consensus 142 -------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 142 -------ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp -------SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred -------CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeeccCCCCCceEEEEEEec
Confidence 3467999999999999999999876666677777766 78765321 11222345777777774
No 211
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.89 E-value=2.2e-09 Score=109.91 Aligned_cols=104 Identities=12% Similarity=0.080 Sum_probs=74.1
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHH--cCCC--ceEEeecccCC-------CCCCCC
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE--RGAP--AMVAAFATRRL-------PYPSQA 338 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~--rg~~--~~~~~~d~e~L-------pf~d~s 338 (666)
...+|||+|||+|.++..++.+ +|+++|+++.++..++.+.... .++. ..+...|+..+ ++++++
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 4578999999999998888754 8999999999887776433220 3333 34455566655 356789
Q ss_pred eeEEEeccccccc-----------------ccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 339 FDLIHCSRCRINW-----------------TRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 339 FDlVv~s~~l~h~-----------------~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
||+|+|+..+... ......+++++.++|||||.|++...
T Consensus 116 fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 116 FHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp EEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 9999987332211 12356889999999999999999853
No 212
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.89 E-value=3.6e-09 Score=109.68 Aligned_cols=94 Identities=15% Similarity=0.297 Sum_probs=70.5
Q ss_pred eEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----c-----ccccccccCCCCCCCCCccceEEec-
Q 005981 521 NVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----G-----LIGVMHDWCEPFDTYPRTYDLLHAA- 589 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----G-----lig~~~~~ce~~~~yp~tyDliha~- 589 (666)
.|||+|||.|.++.+|++.|. +|+.+|. +.+++.+.++ | -+.+...-.+.++. +.+||+|.|.
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~ 158 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGW-----EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISS 158 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTC-----CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECH
T ss_pred cEEEEeccCCHHHHHHHHcCC-----eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECC
Confidence 699999999999999999987 4566663 5777777665 2 24455555555553 7999999975
Q ss_pred cccccCCCCCCHHHHHHHhhhcccCCeEEEEE
Q 005981 590 GLFSVESKRCNMSTIMLEMDRMLRPGGHVYIR 621 (666)
Q Consensus 590 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~ 621 (666)
.++.+. +..+...+|.++.|+|||||+++|.
T Consensus 159 ~~~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 159 GSINEL-DEADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp HHHTTS-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccC-CHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 444443 3334579999999999999999996
No 213
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.89 E-value=1e-09 Score=112.81 Aligned_cols=94 Identities=9% Similarity=0.178 Sum_probs=71.3
Q ss_pred eEeeccccchHHHHHHhhC----CCceEEEEeeccC-CCCChhHHHhc----cc---cccccccCCCCCCCC-CccceEE
Q 005981 521 NVLDMRAGFGGFAAALIEQ----KFDCWVMNVVPVS-GFNTLPVIYDR----GL---IGVMHDWCEPFDTYP-RTYDLLH 587 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~----~~~vwvmnv~~~~-~~~~l~~~~er----Gl---ig~~~~~ce~~~~yp-~tyDlih 587 (666)
+|||+|||+|.++.+|+++ |+ +|+.+| ++.|++.|.+| |+ +.+.+.- +..+| ..||+|.
T Consensus 73 ~vLDlGcGtG~~~~~la~~~~~~~~-----~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D---~~~~~~~~~d~v~ 144 (261)
T 4gek_A 73 QVYDLGCSLGAATLSVRRNIHHDNC-----KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGD---IRDIAIENASMVV 144 (261)
T ss_dssp EEEEETCTTTHHHHHHHHTCCSSSC-----EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC---TTTCCCCSEEEEE
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCCC-----EEEEEECCHHHHHHHHHHHHhhccCceEEEeecc---cccccccccccce
Confidence 4999999999999999875 44 677787 47899888775 44 4444444 33445 6799999
Q ss_pred eccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC
Q 005981 588 AAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS 623 (666)
Q Consensus 588 a~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~ 623 (666)
+..++.+.... +...+|.||.|+|||||.+||+|.
T Consensus 145 ~~~~l~~~~~~-~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 145 LNFTLQFLEPS-ERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp EESCGGGSCHH-HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeeeeeecCch-hHhHHHHHHHHHcCCCcEEEEEec
Confidence 98887765431 235789999999999999999853
No 214
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.89 E-value=7.7e-09 Score=104.00 Aligned_cols=132 Identities=14% Similarity=0.165 Sum_probs=91.5
Q ss_pred eeEeeccccchHHHHHHhh--CCCceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCCC---CCCccceEE
Q 005981 520 RNVLDMRAGFGGFAAALIE--QKFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFDT---YPRTYDLLH 587 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~--~~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~~---yp~tyDlih 587 (666)
..|||+|||.|.++..|+. .+. .|+.+|. +.+++++.++ |+ +.+++...+.++. .+.+||+|.
T Consensus 72 ~~vLDiG~G~G~~~~~la~~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~ 146 (240)
T 1xdz_A 72 NTICDVGAGAGFPSLPIKICFPHL-----HVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVT 146 (240)
T ss_dssp CEEEEECSSSCTTHHHHHHHCTTC-----EEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCC-----EEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEE
Confidence 4799999999999998884 344 5666663 5666666553 55 5666655555442 257999999
Q ss_pred eccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC---hhHHHHHHHHHHhcCcEEEEEec-c-CCCCCceEEEEEEeC
Q 005981 588 AAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS---IDVMDELQEIGKAMGWHVTLRET-A-EGPHASYRILTADKR 662 (666)
Q Consensus 588 a~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~---~~~~~~~~~i~~~l~W~~~~~~~-~-~~~~~~e~~l~~~k~ 662 (666)
|..+ .++..++.++.|+|||||++++.+. .+.+..+.+.++...++...... . ........+++++|.
T Consensus 147 ~~~~-------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~k~ 219 (240)
T 1xdz_A 147 ARAV-------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIRKI 219 (240)
T ss_dssp EECC-------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred Eecc-------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEEec
Confidence 9752 4578999999999999999999753 34566777788888888754321 1 111234567777775
Q ss_pred C
Q 005981 663 L 663 (666)
Q Consensus 663 ~ 663 (666)
=
T Consensus 220 ~ 220 (240)
T 1xdz_A 220 K 220 (240)
T ss_dssp S
T ss_pred C
Confidence 3
No 215
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.88 E-value=2.8e-09 Score=107.21 Aligned_cols=94 Identities=17% Similarity=0.163 Sum_probs=74.2
Q ss_pred eeEeeccccchHHHHHHhhC--CCceEEEEeeccC-CCCChhHHHhccc-cccccccCCCCCCCCCccceEEeccccccC
Q 005981 520 RNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVS-GFNTLPVIYDRGL-IGVMHDWCEPFDTYPRTYDLLHAAGLFSVE 595 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~-~~~~l~~~~erGl-ig~~~~~ce~~~~yp~tyDliha~~~f~~~ 595 (666)
.+|||+|||.|.++.+|++. +. +|+.+| ++.+++.+.++.- +.+.+...+.++ .+.+||+|++..++.+.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~~~-----~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~ 108 (259)
T 2p35_A 35 LNGYDLGCGPGNSTELLTDRYGVN-----VITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQWV 108 (259)
T ss_dssp SSEEEETCTTTHHHHHHHHHHCTT-----SEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGGGS
T ss_pred CEEEEecCcCCHHHHHHHHhCCCC-----EEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchhhC
Confidence 46999999999999999987 65 455566 3578888887732 445555555555 35899999999988887
Q ss_pred CCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 596 SKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 596 ~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
. +...+|.|+.|+|||||++++..
T Consensus 109 ~---~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 109 P---DHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp T---THHHHHHHHGGGEEEEEEEEEEE
T ss_pred C---CHHHHHHHHHHhcCCCeEEEEEe
Confidence 5 35799999999999999999974
No 216
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.88 E-value=3.7e-09 Score=107.59 Aligned_cols=117 Identities=15% Similarity=0.169 Sum_probs=87.2
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhc----cc---cccccccCCCCCCCCCccceEEeccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDR----GL---IGVMHDWCEPFDTYPRTYDLLHAAGL 591 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~er----Gl---ig~~~~~ce~~~~yp~tyDliha~~~ 591 (666)
..|||+|||.|.++..|++.+. .+|+.+| ++.+++.+.++ |+ +.+.....+.++.-+.+||+|+|.++
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 48 SLIADIGCGTGGQTMVLAGHVT----GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp CEEEEETCTTCHHHHHHHTTCS----SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSC
T ss_pred CEEEEeCCCCCHHHHHHHhccC----CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCC
Confidence 4699999999999999999842 1455566 35677766655 44 55555555555532489999999999
Q ss_pred cccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh---------------------hHHHHHHHHHHhcCcEEEEE
Q 005981 592 FSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI---------------------DVMDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 592 f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~---------------------~~~~~~~~i~~~l~W~~~~~ 644 (666)
+.+. +...+|.++.|+|||||++++.+.. .....+.+++++-.++....
T Consensus 124 ~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (267)
T 3kkz_A 124 IYNI----GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVAT 193 (267)
T ss_dssp GGGT----CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEE
T ss_pred ceec----CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 8876 4589999999999999999997531 12457788888889887543
No 217
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.88 E-value=8.7e-09 Score=108.11 Aligned_cols=103 Identities=15% Similarity=0.142 Sum_probs=71.9
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHH-Hc---CCCceEEeecccCCCC--CCCCeeEEE
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFAL-ER---GAPAMVAAFATRRLPY--PSQAFDLIH 343 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~-~r---g~~~~~~~~d~e~Lpf--~d~sFDlVv 343 (666)
.+.+|||||||+|.++..+++. +|+++|+++.++..++..+.. .. .....+...|...++. .+++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi 174 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVI 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEE
Confidence 4579999999999999988764 799999999988777654422 11 1223444455444432 468999999
Q ss_pred ecccccccccCh----HHHHHHHHHhccCCeEEEEEEC
Q 005981 344 CSRCRINWTRDD----GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 344 ~s~~l~h~~~d~----~~~L~el~RvLkPGG~lv~st~ 377 (666)
+... .++.... ..+++++.|+|||||.+++...
T Consensus 175 ~d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 175 IDTT-DPAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp EECC----------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ECCC-CccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 8654 3332222 5889999999999999999864
No 218
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.88 E-value=2.8e-09 Score=111.12 Aligned_cols=135 Identities=18% Similarity=0.132 Sum_probs=97.6
Q ss_pred eeEeeccccchHHHHHHh--hC-CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCCCCCCCCccceEEe
Q 005981 520 RNVLDMRAGFGGFAAALI--EQ-KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEPFDTYPRTYDLLHA 588 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~--~~-~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~~~~yp~tyDliha 588 (666)
..|||+|||.|.++.+|+ .. +. +|+.+|. +.+++.+.++ |+ +.+++...+.++ ++.+||+|.+
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~ 193 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPGV-----QLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD-TREGYDLLTS 193 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTTC-----EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC-CCSCEEEEEC
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCC-----eEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC-ccCCeEEEEE
Confidence 359999999999999995 22 44 5666663 5677777654 33 445544444443 4599999999
Q ss_pred ccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh---------------------------------------hHHHH
Q 005981 589 AGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI---------------------------------------DVMDE 629 (666)
Q Consensus 589 ~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~---------------------------------------~~~~~ 629 (666)
..++.+..+.-....+|.|+.|+|||||++++.+.. ...+.
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (305)
T 3ocj_A 194 NGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQ 273 (305)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHH
T ss_pred CChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHH
Confidence 999988776544446899999999999999998611 13678
Q ss_pred HHHHHHhcCcEEEEEeccCCCCCceEEEEEEeC
Q 005981 630 LQEIGKAMGWHVTLRETAEGPHASYRILTADKR 662 (666)
Q Consensus 630 ~~~i~~~l~W~~~~~~~~~~~~~~e~~l~~~k~ 662 (666)
++++++.-.++....... .......++++|+
T Consensus 274 ~~~~l~~aGF~~v~~~~~--~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 274 TRAQLEEAGFTDLRFEDD--RARLFPTVIARKP 304 (305)
T ss_dssp HHHHHHHTTCEEEEEECC--TTSSSCEEEEECC
T ss_pred HHHHHHHCCCEEEEEEcc--cCceeeEEEEecC
Confidence 899999999998655432 2234567888885
No 219
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.88 E-value=7.2e-09 Score=100.27 Aligned_cols=139 Identities=12% Similarity=0.083 Sum_probs=96.1
Q ss_pred eEeeccccchHHHHHHhhC--CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCCCCC-CCCccceEEec
Q 005981 521 NVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEPFDT-YPRTYDLLHAA 589 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~~~~-yp~tyDliha~ 589 (666)
+|||+|||.|.++.+|++. +. .+|+.+|. +.+++.+.++ |+ +.+.+...+.+.. .+.+||+|.++
T Consensus 25 ~vLDlGcG~G~~~~~l~~~~~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 25 TVVDATCGNGNDTAFLASLVGEN----GRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp EEEESCCTTSHHHHHHHHHHCTT----CEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred EEEEcCCCCCHHHHHHHHHhCCC----CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 6999999999999999887 21 15677774 5677766655 44 5555555555553 34899999988
Q ss_pred cccccCCCC------CCHHHHHHHhhhcccCCeEEEEEeC------hhHHHHHHHHHHhcC---cEEEEEeccCCCCCce
Q 005981 590 GLFSVESKR------CNMSTIMLEMDRMLRPGGHVYIRDS------IDVMDELQEIGKAMG---WHVTLRETAEGPHASY 654 (666)
Q Consensus 590 ~~f~~~~~~------c~~~~~l~E~dRiLRPgG~~ii~d~------~~~~~~~~~i~~~l~---W~~~~~~~~~~~~~~e 654 (666)
..+....+. -+...++.++.|+|||||++++.+. .+....+.+.++.+. |++.....-+....+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~pp 180 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANCPP 180 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCSCCC
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCccCCC
Confidence 655211111 1234799999999999999999852 234566777776665 8887776655556677
Q ss_pred EEEEEEeCC
Q 005981 655 RILTADKRL 663 (666)
Q Consensus 655 ~~l~~~k~~ 663 (666)
.+++.+|..
T Consensus 181 ~~~~~~~~~ 189 (197)
T 3eey_A 181 ILVCIEKIS 189 (197)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEcc
Confidence 888888853
No 220
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.87 E-value=2.3e-09 Score=107.61 Aligned_cols=105 Identities=18% Similarity=0.232 Sum_probs=79.2
Q ss_pred HHHhcccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCCCCC
Q 005981 508 YVRALHWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFDTYP 580 (666)
Q Consensus 508 Y~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~~yp 580 (666)
+.+.+++..+ .+|||+|||.|.++.+|++.+. +|+.+|. +.+++.+.++ |+ +.+.+...+.++.-+
T Consensus 13 ~~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 13 MIKTAECRAE--HRVLDIGAGAGHTALAFSPYVQ-----ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHHHTCCTT--CEEEEESCTTSHHHHHHGGGSS-----EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCT
T ss_pred HHHHhCcCCC--CEEEEEccCcCHHHHHHHHhCC-----EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCC
Confidence 4455565554 3599999999999999999875 5666663 5677666554 44 455555556555333
Q ss_pred CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 581 RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 581 ~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
++||+|+|..++.+..+ ...+|.|+.|+|||||++++.+
T Consensus 86 ~~fD~v~~~~~l~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFSD---VRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp TCEEEEEEESCGGGCSC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcEEEEEECCchhhccC---HHHHHHHHHHHcCCCcEEEEEE
Confidence 89999999988888754 5899999999999999999974
No 221
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.87 E-value=5.3e-09 Score=106.13 Aligned_cols=98 Identities=13% Similarity=0.110 Sum_probs=72.2
Q ss_pred CCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccC-CCCC--CCCeeEEEe
Q 005981 275 IRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LPYP--SQAFDLIHC 344 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~-Lpf~--d~sFDlVv~ 344 (666)
..+|||||||+|..+..++.. +|+++|+++.++..++... ...++. ..+...++.. ++.. .++||+|++
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENL-QLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHH-HHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 479999999999999888764 7999999999998877544 444544 3344444433 3322 358999997
Q ss_pred cccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 345 SRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 345 s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
... ..+...++.++.++|||||++++...
T Consensus 143 d~~----~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 143 DAD----KPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp CSC----GGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CCc----hHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 532 24456899999999999999998853
No 222
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.87 E-value=2.8e-09 Score=110.67 Aligned_cols=106 Identities=15% Similarity=0.152 Sum_probs=79.2
Q ss_pred HHHHhcccCCCceeeEeeccccchHHHHHHhhC-CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCCCC
Q 005981 507 SYVRALHWKKMKLRNVLDMRAGFGGFAAALIEQ-KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEPFD 577 (666)
Q Consensus 507 ~Y~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~-~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~~~ 577 (666)
...+.+++..+ ..|||+|||.|+++.+|++. |+ +|+.+|. +.+++.+.++ |+ +.+.+...+.+
T Consensus 63 ~~~~~~~~~~~--~~vLDiGcG~G~~~~~la~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~- 134 (302)
T 3hem_A 63 LALDKLNLEPG--MTLLDIGCGWGSTMRHAVAEYDV-----NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF- 134 (302)
T ss_dssp HHHHTTCCCTT--CEEEEETCTTSHHHHHHHHHHCC-----EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-
T ss_pred HHHHHcCCCCc--CEEEEeeccCcHHHHHHHHhCCC-----EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-
Confidence 34444555544 35999999999999999998 76 5666663 5777777665 44 44444443334
Q ss_pred CCCCccceEEeccccccCCCC------CCHHHHHHHhhhcccCCeEEEEEe
Q 005981 578 TYPRTYDLLHAAGLFSVESKR------CNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 578 ~yp~tyDliha~~~f~~~~~~------c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
+.+||+|.+..+|.+..+. -.+..+|.++.|+|||||.++|.+
T Consensus 135 --~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 135 --DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp --CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred --CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 7999999999999988543 456799999999999999999974
No 223
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.87 E-value=5.1e-09 Score=103.81 Aligned_cols=96 Identities=13% Similarity=0.069 Sum_probs=71.4
Q ss_pred CCCeEEEECCCCchhHHHhccC---------CeEEEeCCcchHHHHHHHHHHHcC-----C-CceEEeecccCCC----C
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR---------NVITMSIAPKDVHENQIQFALERG-----A-PAMVAAFATRRLP----Y 334 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---------~V~gvDiS~~~l~~a~~~~a~~rg-----~-~~~~~~~d~e~Lp----f 334 (666)
+..+|||||||+|.++..+++. +|+++|+++.++..++...... + . ...+...|..... .
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRD-KPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHH-CGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHc-CccccccCCEEEEECChHhcccccCc
Confidence 4579999999999888777642 7999999999988877554443 3 2 2344455555544 4
Q ss_pred CCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 335 PSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 335 ~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
..++||+|++...+.++ +.++.++|||||.+++...
T Consensus 159 ~~~~fD~I~~~~~~~~~-------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ELGLFDAIHVGASASEL-------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHCCEEEEEECSBBSSC-------CHHHHHHEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchHHH-------HHHHHHhcCCCcEEEEEEc
Confidence 56789999988775543 4788999999999999864
No 224
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.87 E-value=7.2e-10 Score=105.74 Aligned_cols=88 Identities=18% Similarity=0.111 Sum_probs=66.9
Q ss_pred CCCCeEEEECCCCchhHHHhccCCeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCC---CCCCeeEEEeccccc
Q 005981 273 HHIRVVMDAGCGVASFGAYLLPRNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY---PSQAFDLIHCSRCRI 349 (666)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf---~d~sFDlVv~s~~l~ 349 (666)
+++.+|||||||. | ++|+|+.|+..++.+.. ....+...+++.+++ ++++||+|+|+.+++
T Consensus 11 ~~g~~vL~~~~g~-----------v-~vD~s~~ml~~a~~~~~----~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~ 74 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-----------S-PVEALKGLVDKLQALTG----NEGRVSVENIKQLLQSAHKESSFDIILSGLVPG 74 (176)
T ss_dssp CTTSEEEEEECTT-----------S-CHHHHHHHHHHHHHHTT----TTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTT
T ss_pred CCCCEEEEecCCc-----------e-eeeCCHHHHHHHHHhcc----cCcEEEEechhcCccccCCCCCEeEEEECChhh
Confidence 3568999999996 2 27888888766553321 124455567778877 789999999988755
Q ss_pred ccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 350 NWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 350 h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
|+..+...+|++++|+|||||+|++..
T Consensus 75 ~~~~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 75 STTLHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp CCCCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcccCHHHHHHHHHHHCCCCEEEEEEc
Confidence 553778999999999999999999974
No 225
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.87 E-value=9.7e-09 Score=104.00 Aligned_cols=113 Identities=12% Similarity=0.038 Sum_probs=74.1
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR 331 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~ 331 (666)
.....++..+..+. -.++.+|||+|||+|.++..+++. .|+|+|+++.|+.... +.++++. .......|+..
T Consensus 60 kla~~ll~~l~~~~-l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~-~~a~~r~-nv~~i~~Da~~ 136 (232)
T 3id6_C 60 KLAGAILKGLKTNP-IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELL-LVAQRRP-NIFPLLADARF 136 (232)
T ss_dssp HHHHHHHTTCSCCS-CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHH-HHHHHCT-TEEEEECCTTC
T ss_pred HHHHHHHhhhhhcC-CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHH-HHhhhcC-CeEEEEccccc
Confidence 33455666664321 245689999999999999887753 7999999998875432 3454442 33344445443
Q ss_pred CC---CCCCCeeEEEecccccccccChHH-HHHHHHHhccCCeEEEEEE
Q 005981 332 LP---YPSQAFDLIHCSRCRINWTRDDGI-LLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 332 Lp---f~d~sFDlVv~s~~l~h~~~d~~~-~L~el~RvLkPGG~lv~st 376 (666)
.. ...++||+|++... . .+... ++..+.++|||||.|+++.
T Consensus 137 ~~~~~~~~~~~D~I~~d~a-~---~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 137 PQSYKSVVENVDVLYVDIA-Q---PDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp GGGTTTTCCCEEEEEECCC-C---TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhccccceEEEEecCC-C---hhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 21 12468999997643 2 34444 4455667999999999984
No 226
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.87 E-value=1.2e-08 Score=101.30 Aligned_cols=135 Identities=16% Similarity=0.157 Sum_probs=93.8
Q ss_pred eeEeeccccchHHHHHHhhC--CCceEEEEeeccCC-CCChhHHHhcc----ccccccccCCCCCCCCCccceEEecccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIYDRG----LIGVMHDWCEPFDTYPRTYDLLHAAGLF 592 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~erG----lig~~~~~ce~~~~yp~tyDliha~~~f 592 (666)
..|||+|||.|.++.+|++. +. +|+.+|. +.+++.+.++- -+.+.....+.++ ++.+||+|.+..++
T Consensus 46 ~~vLDiG~G~G~~~~~l~~~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l 119 (234)
T 3dtn_A 46 PDILDLGAGTGLLSAFLMEKYPEA-----TFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYD-FEEKYDMVVSALSI 119 (234)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTC-----EEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCC-CCSCEEEEEEESCG
T ss_pred CeEEEecCCCCHHHHHHHHhCCCC-----eEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccC-CCCCceEEEEeCcc
Confidence 57999999999999999988 55 5666663 67888887762 2334444444433 23899999999998
Q ss_pred ccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh-----------------------------------------hHHHHHH
Q 005981 593 SVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI-----------------------------------------DVMDELQ 631 (666)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~-----------------------------------------~~~~~~~ 631 (666)
.+..+. ....+|.|+.|+|||||++++.|.. ...+.+.
T Consensus 120 ~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (234)
T 3dtn_A 120 HHLEDE-DKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQL 198 (234)
T ss_dssp GGSCHH-HHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHH
T ss_pred ccCCHH-HHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHH
Confidence 887542 2235999999999999999998621 0124566
Q ss_pred HHHHhcCcEEEEEeccCCCCCceEEEEEEeCCC
Q 005981 632 EIGKAMGWHVTLRETAEGPHASYRILTADKRLL 664 (666)
Q Consensus 632 ~i~~~l~W~~~~~~~~~~~~~~e~~l~~~k~~~ 664 (666)
++++.-.++......... ...++...|+=|
T Consensus 199 ~ll~~aGF~~v~~~~~~~---~~~~~~~~~~~~ 228 (234)
T 3dtn_A 199 NWLKEAGFRDVSCIYKYY---QFAVMFGRKTEG 228 (234)
T ss_dssp HHHHHTTCEEEEEEEEET---TEEEEEEECC--
T ss_pred HHHHHcCCCceeeeeeec---ceeEEEEEeccc
Confidence 688888888654433322 356777777655
No 227
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.86 E-value=2.7e-09 Score=114.53 Aligned_cols=104 Identities=13% Similarity=0.218 Sum_probs=74.7
Q ss_pred HHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCC
Q 005981 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY 334 (666)
Q Consensus 259 i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf 334 (666)
.+.+.+.+..+ ....+|||||||+|.++..++++ +++++|+ +.++..++ +. ....+...|+.. ++
T Consensus 197 ~~~l~~~~~~~---~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~-----~~-~~v~~~~~d~~~-~~ 265 (372)
T 1fp1_D 197 MKRMLEIYTGF---EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAP-----PL-SGIEHVGGDMFA-SV 265 (372)
T ss_dssp HHHHHHHCCTT---TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----CC-TTEEEEECCTTT-CC
T ss_pred HHHHHHHhhcc---CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhh-----hc-CCCEEEeCCccc-CC
Confidence 34455544322 34579999999999999888764 6788898 76654332 21 123444556555 55
Q ss_pred CCCCeeEEEecccccccccChH--HHHHHHHHhccCCeEEEEEE
Q 005981 335 PSQAFDLIHCSRCRINWTRDDG--ILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 335 ~d~sFDlVv~s~~l~h~~~d~~--~~L~el~RvLkPGG~lv~st 376 (666)
+. ||+|++..+++|| ++.. .+|++++++|||||.+++.+
T Consensus 266 ~~--~D~v~~~~~lh~~-~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 266 PQ--GDAMILKAVCHNW-SDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp CC--EEEEEEESSGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC--CCEEEEecccccC-CHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 54 9999999998888 5555 99999999999999999985
No 228
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.86 E-value=8.3e-09 Score=102.39 Aligned_cols=113 Identities=14% Similarity=0.117 Sum_probs=74.3
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRR 331 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~ 331 (666)
.....+...+..+. -.+..+|||+|||+|.++..+++ .+|+++|+++.++..+.. .++.. ....+...|+..
T Consensus 57 ~~~~~i~~~l~~~~-~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~-~~~~~-~~v~~~~~d~~~ 133 (227)
T 1g8a_A 57 KLGAAIMNGLKNFP-IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVP-IVEER-RNIVPILGDATK 133 (227)
T ss_dssp HHHHHHHTTCCCCC-CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHH-HHSSC-TTEEEEECCTTC
T ss_pred hHHHHHHhhHHhcC-CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHH-HHhcc-CCCEEEEccCCC
Confidence 33455544443221 13457999999999999888774 379999999988866653 33322 233444455544
Q ss_pred C---CCCCCCeeEEEecccccccccChH-HHHHHHHHhccCCeEEEEEE
Q 005981 332 L---PYPSQAFDLIHCSRCRINWTRDDG-ILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 332 L---pf~d~sFDlVv~s~~l~h~~~d~~-~~L~el~RvLkPGG~lv~st 376 (666)
. ....++||+|++... ..+.. .++.++.++|||||.+++..
T Consensus 134 ~~~~~~~~~~~D~v~~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 134 PEEYRALVPKVDVIFEDVA----QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp GGGGTTTCCCEEEEEECCC----STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhcccCCceEEEECCC----CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 2 112368999997543 23333 55999999999999999973
No 229
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.86 E-value=1.3e-08 Score=100.85 Aligned_cols=137 Identities=15% Similarity=0.123 Sum_probs=95.3
Q ss_pred eeEeecccc-chHHHHHHhhC-CCceEEEEeeccCC-CCChhHHHhc----cc-cccccccCCCCCCCC-CccceEEecc
Q 005981 520 RNVLDMRAG-FGGFAAALIEQ-KFDCWVMNVVPVSG-FNTLPVIYDR----GL-IGVMHDWCEPFDTYP-RTYDLLHAAG 590 (666)
Q Consensus 520 RnvlD~g~G-~Ggfaa~L~~~-~~~vwvmnv~~~~~-~~~l~~~~er----Gl-ig~~~~~ce~~~~yp-~tyDliha~~ 590 (666)
.+|||+||| .|.++.+|++. +. +|+.+|. +.+++.+.++ |+ +.+++...+.+..++ .+||+|.++-
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFFNC-----KVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHHCC-----EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECC
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC-----EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECC
Confidence 469999999 99999999988 55 5666663 5666666543 54 555554433444555 8999999986
Q ss_pred ccccCCC----------------CCCHHHHHHHhhhcccCCeEEEEE--eChhHHHHHHHHHHhcCcEEEEEeccCCCCC
Q 005981 591 LFSVESK----------------RCNMSTIMLEMDRMLRPGGHVYIR--DSIDVMDELQEIGKAMGWHVTLRETAEGPHA 652 (666)
Q Consensus 591 ~f~~~~~----------------~c~~~~~l~E~dRiLRPgG~~ii~--d~~~~~~~~~~i~~~l~W~~~~~~~~~~~~~ 652 (666)
.|....+ ...+..++.++.|+|||||++++. ...+....+.+.++...|++.......| ..
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g-~~ 210 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKFKVG-TR 210 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEECCC-C-
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEecCC-Ce
Confidence 5543221 111468999999999999999984 3446788899999999998877655443 34
Q ss_pred ceEEEEEEeC
Q 005981 653 SYRILTADKR 662 (666)
Q Consensus 653 ~e~~l~~~k~ 662 (666)
.-.+|+.+|.
T Consensus 211 ~~~~l~f~~~ 220 (230)
T 3evz_A 211 WRHSLIFFKG 220 (230)
T ss_dssp CEEEEEEECC
T ss_pred EEEEEEEecc
Confidence 4567777663
No 230
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.86 E-value=4.4e-09 Score=105.82 Aligned_cols=116 Identities=14% Similarity=0.200 Sum_probs=86.9
Q ss_pred eEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCCCCCCCCccceEEecccc
Q 005981 521 NVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEPFDTYPRTYDLLHAAGLF 592 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~~~~yp~tyDliha~~~f 592 (666)
.|||+|||.|.++..|++.+- . .|+.+|. +.+++.+.++ |+ +.+.+.-.+.++.-+.+||+|+|.+++
T Consensus 49 ~vLDiG~G~G~~~~~l~~~~~-~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 124 (257)
T 3f4k_A 49 KIADIGCGTGGQTLFLADYVK-G---QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAI 124 (257)
T ss_dssp EEEEETCTTSHHHHHHHHHCC-S---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCS
T ss_pred eEEEeCCCCCHHHHHHHHhCC-C---eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChH
Confidence 699999999999999999842 1 5666663 5677766554 44 445555545555334899999999988
Q ss_pred ccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh---------------------hHHHHHHHHHHhcCcEEEEE
Q 005981 593 SVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI---------------------DVMDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~---------------------~~~~~~~~i~~~l~W~~~~~ 644 (666)
.+. +...+|.++.|+|||||++++.+.. .....+.++++.-.++....
T Consensus 125 ~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (257)
T 3f4k_A 125 YNI----GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAH 193 (257)
T ss_dssp CCC----CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEE
T ss_pred hhc----CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 876 4689999999999999999998621 12466788888888887654
No 231
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.85 E-value=4.7e-09 Score=117.09 Aligned_cols=112 Identities=13% Similarity=0.202 Sum_probs=80.9
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR 331 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~ 331 (666)
.+.+.+.+.+.. .+..+|||||||+|.++..+++. +|+|+|+++ ++..++ +.+...++. ..+...+.++
T Consensus 145 ~~~~~il~~l~~----~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~-~~~~~~gl~~~v~~~~~d~~~ 218 (480)
T 3b3j_A 145 TYQRAILQNHTD----FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAE-VLVKSNNLTDRIVVIPGKVEE 218 (480)
T ss_dssp HHHHHHHHTGGG----TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHH-HHHHHTTCTTTEEEEESCTTT
T ss_pred HHHHHHHHhhhh----cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHH-HHHHHcCCCCcEEEEECchhh
Confidence 355556655542 24579999999999999888764 799999998 876665 344555653 3455556777
Q ss_pred CCCCCCCeeEEEeccccccccc-ChHHHHHHHHHhccCCeEEEEE
Q 005981 332 LPYPSQAFDLIHCSRCRINWTR-DDGILLLEVNRMLRAGGYFAWA 375 (666)
Q Consensus 332 Lpf~d~sFDlVv~s~~l~h~~~-d~~~~L~el~RvLkPGG~lv~s 375 (666)
++++ ++||+|+|+.+.+++.. +....+.++.++|||||.+++.
T Consensus 219 ~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 219 VSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp CCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred CccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 7665 68999998766666632 2346777899999999999864
No 232
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.85 E-value=1.5e-08 Score=100.63 Aligned_cols=94 Identities=14% Similarity=0.250 Sum_probs=71.2
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc-cccccccCCCCCCCCCccceEEecc-cc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL-IGVMHDWCEPFDTYPRTYDLLHAAG-LF 592 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl-ig~~~~~ce~~~~yp~tyDliha~~-~f 592 (666)
.+|||+|||.|.++..|++. . +|+.+|. +.+++.+.++ |. +.+.+.-.+.++ ++.+||+|.+.. ++
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~-~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~~~ 107 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH-Y-----EVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE-LPEPVDAITILCDSL 107 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT-S-----EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC-CSSCEEEEEECTTGG
T ss_pred CeEEEecCCCCHHHHHHhhC-C-----eEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC-CCCCcCEEEEeCCch
Confidence 57999999999999999987 4 5666663 5777777665 22 344433333333 458999999985 88
Q ss_pred ccCCCCCCHHHHHHHhhhcccCCeEEEE
Q 005981 593 SVESKRCNMSTIMLEMDRMLRPGGHVYI 620 (666)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRPgG~~ii 620 (666)
.+..+..+...+|.++.|+|||||.+++
T Consensus 108 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 108 NYLQTEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp GGCCSHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 8876555667899999999999999998
No 233
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.84 E-value=1.1e-08 Score=106.83 Aligned_cols=132 Identities=16% Similarity=0.178 Sum_probs=89.6
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhcc--ccccccccCCCC--CCCC-CccceEEeccccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRG--LIGVMHDWCEPF--DTYP-RTYDLLHAAGLFS 593 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erG--lig~~~~~ce~~--~~yp-~tyDliha~~~f~ 593 (666)
+.|||+|||+|+|+..|+++|+ -.|+.+| +++||..+..+. ++..-....+.+ ..+| .+||+|.|+..|.
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga----~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~ 162 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGA----KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFI 162 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC----SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSS
T ss_pred cEEEecCCCccHHHHHHHhCCC----CEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHh
Confidence 3599999999999999999874 2577777 478998865432 111111111111 1134 4699999987776
Q ss_pred cCCCCCCHHHHHHHhhhcccCCeEEEEEeC----------------------hhHHHHHHHHHHhcCcEEEEEecc--CC
Q 005981 594 VESKRCNMSTIMLEMDRMLRPGGHVYIRDS----------------------IDVMDELQEIGKAMGWHVTLRETA--EG 649 (666)
Q Consensus 594 ~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~----------------------~~~~~~~~~i~~~l~W~~~~~~~~--~~ 649 (666)
. +..+|.|+.|+|||||.+++-.. ....+++...+....|.+...... .|
T Consensus 163 s------l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~g 236 (291)
T 3hp7_A 163 S------LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQG 236 (291)
T ss_dssp C------GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSCC
T ss_pred h------HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
Confidence 3 36899999999999999998511 124677888899999997654332 12
Q ss_pred C-CCceEEEEEEe
Q 005981 650 P-HASYRILTADK 661 (666)
Q Consensus 650 ~-~~~e~~l~~~k 661 (666)
+ ...|-++.++|
T Consensus 237 ~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 237 GHGNIEFLAHLEK 249 (291)
T ss_dssp GGGCCCEEEEEEE
T ss_pred CCcCHHHHHHhhh
Confidence 2 34577777776
No 234
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.84 E-value=3.6e-09 Score=110.54 Aligned_cols=103 Identities=16% Similarity=0.180 Sum_probs=77.0
Q ss_pred HHhcccCCCceeeEeeccccchHHHHHHhhC-CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCCCCCC
Q 005981 509 VRALHWKKMKLRNVLDMRAGFGGFAAALIEQ-KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEPFDTY 579 (666)
Q Consensus 509 ~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~-~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~~~~y 579 (666)
.+.+++..+ .+|||+|||.|.++..|++. |+ +|+.+|. +.+++.+.++ |+ +.+.+...+. +
T Consensus 83 ~~~~~~~~~--~~vLDiGcG~G~~~~~la~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~ 152 (318)
T 2fk8_A 83 LDKLDLKPG--MTLLDIGCGWGTTMRRAVERFDV-----NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED---F 152 (318)
T ss_dssp HTTSCCCTT--CEEEEESCTTSHHHHHHHHHHCC-----EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG---C
T ss_pred HHhcCCCCc--CEEEEEcccchHHHHHHHHHCCC-----EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH---C
Confidence 344444444 36999999999999999988 76 5666663 5777777765 44 4444433333 4
Q ss_pred CCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 580 PRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 580 p~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
|.+||+|.+..+|.+... -+...+|.|+.|+|||||.+++.+
T Consensus 153 ~~~fD~v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 153 AEPVDRIVSIEAFEHFGH-ENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp CCCCSEEEEESCGGGTCG-GGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCcCEEEEeChHHhcCH-HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 689999999999988753 346799999999999999999974
No 235
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.84 E-value=8.6e-09 Score=101.18 Aligned_cols=96 Identities=11% Similarity=0.091 Sum_probs=70.8
Q ss_pred CCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccC-CCCCCCCeeEEEecc
Q 005981 275 IRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LPYPSQAFDLIHCSR 346 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~-Lpf~d~sFDlVv~s~ 346 (666)
..+|||||||+|..+..++.. +|+++|+++.++..++..... .+.. ..+...+... ++..++ ||+|++..
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHD-NGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH-HSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-CCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 368999999999998888754 899999999998877754443 3432 2334444332 344446 99999753
Q ss_pred cccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 347 CRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 347 ~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
. ..+...++.++.++|||||++++..
T Consensus 135 ~----~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 D----VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp T----TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred C----hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 2 2566789999999999999999874
No 236
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.84 E-value=1e-08 Score=105.73 Aligned_cols=99 Identities=16% Similarity=0.129 Sum_probs=67.4
Q ss_pred CCCeEEEECCCCchhHHHhccC-CeEEEeCCcchHHHHHHHH-H-HHcCCCceEE--eecccCCCCCCCCeeEEEecccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR-NVITMSIAPKDVHENQIQF-A-LERGAPAMVA--AFATRRLPYPSQAFDLIHCSRCR 348 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-~V~gvDiS~~~l~~a~~~~-a-~~rg~~~~~~--~~d~e~Lpf~d~sFDlVv~s~~l 348 (666)
++.+|||||||+|.++..+++. +|+|+|+++ |+..+..+. . ...+....+. ..|+..++ +++||+|+|..+
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~- 149 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASRPHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG- 149 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTSTTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECCC-
T ss_pred CCCEEEEeCcCCCHHHHHHHHcCcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeCc-
Confidence 4579999999999999999886 999999998 532111000 0 0001123344 45666665 689999998655
Q ss_pred cccccCh----H---HHHHHHHHhccCCe--EEEEEEC
Q 005981 349 INWTRDD----G---ILLLEVNRMLRAGG--YFAWAAQ 377 (666)
Q Consensus 349 ~h~~~d~----~---~~L~el~RvLkPGG--~lv~st~ 377 (666)
++..+. . .+|.++.++||||| .|++..+
T Consensus 150 -~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 150 -ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp -CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred -ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 322221 1 37899999999999 9999865
No 237
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.83 E-value=8.9e-09 Score=106.19 Aligned_cols=97 Identities=14% Similarity=0.081 Sum_probs=75.8
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCc-eEEeecccCCCCCCCCeeEEEecccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPA-MVAAFATRRLPYPSQAFDLIHCSRCR 348 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~-~~~~~d~e~Lpf~d~sFDlVv~s~~l 348 (666)
+..+|||+|||+|.++..++.. +|+++|+++.++..++. .++..++.. .+...|+..++. .++||+|++....
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~-n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCE-NIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH 196 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHH-HHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc
Confidence 4579999999999999888753 79999999999988764 444555533 455556666644 5789999976542
Q ss_pred cccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 349 INWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 349 ~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+...++.++.++|+|||.++++..
T Consensus 197 -----~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 197 -----KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp -----SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred -----cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 567789999999999999999865
No 238
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.83 E-value=4.4e-09 Score=105.86 Aligned_cols=94 Identities=17% Similarity=0.262 Sum_probs=73.2
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhcc-----ccccccccCCCCCCCCCccceEEeccccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRG-----LIGVMHDWCEPFDTYPRTYDLLHAAGLFS 593 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erG-----lig~~~~~ce~~~~yp~tyDliha~~~f~ 593 (666)
.+|||+|||.|.++..|++.+. +|+.+| ++.+++.+.++- -+.+.+...+.++.-+.+||+|++..++.
T Consensus 41 ~~vLDiG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 41 PVFLELGVGTGRIALPLIARGY-----RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp CEEEEETCTTSTTHHHHHTTTC-----EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGG
T ss_pred CEEEEeCCcCCHHHHHHHHCCC-----EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchh
Confidence 5699999999999999999876 566666 357888887762 14444444455542238999999998888
Q ss_pred cCCCCCCHHHHHHHhhhcccCCeEEEEE
Q 005981 594 VESKRCNMSTIMLEMDRMLRPGGHVYIR 621 (666)
Q Consensus 594 ~~~~~c~~~~~l~E~dRiLRPgG~~ii~ 621 (666)
+..+ ...+|.|+.|+|||||++++.
T Consensus 116 ~~~~---~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 116 LVPD---WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GCTT---HHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCC---HHHHHHHHHHHCCCCcEEEEE
Confidence 7764 579999999999999999986
No 239
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.83 E-value=1.1e-08 Score=109.27 Aligned_cols=115 Identities=16% Similarity=0.051 Sum_probs=82.9
Q ss_pred HHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccC
Q 005981 258 YLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRR 331 (666)
Q Consensus 258 ~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~ 331 (666)
+...+..+... .+..+|||+|||+|.++..++. .+|+|+|+++.++..++.+ +...++. ..+...|+.+
T Consensus 191 la~~l~~~~~~----~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n-~~~~g~~~i~~~~~D~~~ 265 (354)
T 3tma_A 191 LAQALLRLADA----RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREA-ALASGLSWIRFLRADARH 265 (354)
T ss_dssp HHHHHHHHTTC----CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHH-HHHTTCTTCEEEECCGGG
T ss_pred HHHHHHHHhCC----CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHH-HHHcCCCceEEEeCChhh
Confidence 44445554431 3457899999999998877765 4899999999999888754 4445653 4566667888
Q ss_pred CCCCCCCeeEEEecccccccccC-------hHHHHHHHHHhccCCeEEEEEEC
Q 005981 332 LPYPSQAFDLIHCSRCRINWTRD-------DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 332 Lpf~d~sFDlVv~s~~l~h~~~d-------~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++.+.+.||+|+|+........+ ...++.++.++|||||.+++.+.
T Consensus 266 ~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 266 LPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp GGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred CccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 88777789999986542221111 25788999999999999999975
No 240
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.83 E-value=4.5e-09 Score=108.92 Aligned_cols=117 Identities=14% Similarity=0.167 Sum_probs=72.9
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCc--hhHHHh----c-cCCeEEEeCCcchHHHHHHHHHHHcCCCceEEeecc
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVA--SFGAYL----L-PRNVITMSIAPKDVHENQIQFALERGAPAMVAAFAT 329 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG--~~a~~L----~-~~~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~ 329 (666)
.++.+..+.+.. ....++|||||||++ ..+..+ . ..+|+++|.|+.|+..++............+...|+
T Consensus 64 ~fl~rav~~l~~---~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~ 140 (277)
T 3giw_A 64 DWMNRAVAHLAK---EAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADM 140 (277)
T ss_dssp HHHHHHHHHHHH---TSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCT
T ss_pred HHHHHHHHHhcc---ccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecc
Confidence 344454444431 124578999999973 222222 2 238999999999998776443321111234555565
Q ss_pred cCCC----CC--CCCee-----EEEecccccccccC---hHHHHHHHHHhccCCeEEEEEEC
Q 005981 330 RRLP----YP--SQAFD-----LIHCSRCRINWTRD---DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 330 e~Lp----f~--d~sFD-----lVv~s~~l~h~~~d---~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.++. .+ .+.|| .|+++.+ +||..+ +..+++++.++|+|||+|+++..
T Consensus 141 ~~~~~~l~~~~~~~~~D~~~p~av~~~av-LH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 141 LDPASILDAPELRDTLDLTRPVALTVIAI-VHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIG 201 (277)
T ss_dssp TCHHHHHTCHHHHTTCCTTSCCEEEEESC-GGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEE
T ss_pred cChhhhhcccccccccCcCCcchHHhhhh-HhcCCchhhHHHHHHHHHHhCCCCcEEEEEec
Confidence 5531 01 24455 4666655 555565 45899999999999999999965
No 241
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.83 E-value=8.6e-09 Score=97.50 Aligned_cols=118 Identities=19% Similarity=0.242 Sum_probs=84.8
Q ss_pred hcccCCCceeeEeeccccchHHHHHHhhC--CCceEEEEeeccCC-CCChhHHHhc----cc---cccc-cccCCCCCCC
Q 005981 511 ALHWKKMKLRNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVM-HDWCEPFDTY 579 (666)
Q Consensus 511 ~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~-~~~ce~~~~y 579 (666)
.+.+..+ ..|||+|||.|.++.+|++. +. .|+.+|. +.+++.+.++ |+ + .+ .+..+.++..
T Consensus 20 ~~~~~~~--~~vldiG~G~G~~~~~l~~~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~ 91 (178)
T 3hm2_A 20 ALAPKPH--ETLWDIGGGSGSIAIEWLRSTPQT-----TAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV 91 (178)
T ss_dssp HHCCCTT--EEEEEESTTTTHHHHHHHTTSSSE-----EEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC
T ss_pred HhcccCC--CeEEEeCCCCCHHHHHHHHHCCCC-----eEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc
Confidence 3444444 46999999999999999987 33 5666774 5677777654 43 3 33 3333444443
Q ss_pred CCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC-hhHHHHHHHHHHhcCcEEEE
Q 005981 580 PRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS-IDVMDELQEIGKAMGWHVTL 643 (666)
Q Consensus 580 p~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~-~~~~~~~~~i~~~l~W~~~~ 643 (666)
+.+||+|.+...+.+ ..++.++.|+|||||++++.+. .+....+.+++++..+++..
T Consensus 92 ~~~~D~i~~~~~~~~-------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (178)
T 3hm2_A 92 PDNPDVIFIGGGLTA-------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTISS 149 (178)
T ss_dssp CSCCSEEEECC-TTC-------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEEE
T ss_pred CCCCCEEEECCcccH-------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeEE
Confidence 479999999877655 4799999999999999999864 45677788888888777643
No 242
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.82 E-value=6.2e-09 Score=108.05 Aligned_cols=94 Identities=17% Similarity=0.188 Sum_probs=67.8
Q ss_pred CCCeEEEECCCCchhHHHhccC-CeEEEeCCcchHHHHHHHHHHHcCC-------CceEE--eecccCCCCCCCCeeEEE
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR-NVITMSIAPKDVHENQIQFALERGA-------PAMVA--AFATRRLPYPSQAFDLIH 343 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-~V~gvDiS~~~l~~a~~~~a~~rg~-------~~~~~--~~d~e~Lpf~d~sFDlVv 343 (666)
++.+|||||||+|.++..++++ +|+|+|+++ |+..+ +++.. ...+. ..|+..++ +++||+|+
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~-m~~~a-----~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vv 153 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQPNVREVKAYT-LGTSG-----HEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVL 153 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTSTTEEEEEEEC-CCCTT-----SCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEE
T ss_pred CCCEEEEeccCCCHHHHHHHHcCCEEEEECch-hhhhh-----hhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEE
Confidence 4579999999999999999886 899999998 54221 11111 23444 55677665 68999999
Q ss_pred ecccccccccCh----H---HHHHHHHHhccCCe--EEEEEEC
Q 005981 344 CSRCRINWTRDD----G---ILLLEVNRMLRAGG--YFAWAAQ 377 (666)
Q Consensus 344 ~s~~l~h~~~d~----~---~~L~el~RvLkPGG--~lv~st~ 377 (666)
|..+ ++..+. . .+|.++.++||||| .|++..+
T Consensus 154 sd~~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 154 CDIG--ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp ECCC--CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred ECCC--cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 8655 332221 1 37899999999999 9999865
No 243
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.82 E-value=3.2e-09 Score=106.35 Aligned_cols=123 Identities=20% Similarity=0.224 Sum_probs=90.1
Q ss_pred eeeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhccc------cccccccCCCCCCCCCccceEEeccc
Q 005981 519 LRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRGL------IGVMHDWCEPFDTYPRTYDLLHAAGL 591 (666)
Q Consensus 519 iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erGl------ig~~~~~ce~~~~yp~tyDliha~~~ 591 (666)
-.+|||+|||.|.++.+|++.+. .+|+.+| ++.+++.+.++.- +.+...-.+.++.-+.+||+|.+..+
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 155 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLF----REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWV 155 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTC----SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESC
T ss_pred CCEEEEECCCCCHHHHHHHHhcC----CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcch
Confidence 45799999999999999998842 2566666 3577777766532 33443333444432368999999998
Q ss_pred cccCCCCCCHHHHHHHhhhcccCCeEEEEEeChh---------------HHHHHHHHHHhcCcEEEEEec
Q 005981 592 FSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSID---------------VMDELQEIGKAMGWHVTLRET 646 (666)
Q Consensus 592 f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~---------------~~~~~~~i~~~l~W~~~~~~~ 646 (666)
+.+..+. .+..+|.++.|+|||||+++|.|... ..+.++++++...+++.....
T Consensus 156 l~~~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 224 (241)
T 2ex4_A 156 IGHLTDQ-HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEER 224 (241)
T ss_dssp GGGSCHH-HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEE
T ss_pred hhhCCHH-HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeee
Confidence 8887652 23589999999999999999976321 378899999999998766543
No 244
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.82 E-value=1.3e-08 Score=99.28 Aligned_cols=120 Identities=17% Similarity=0.197 Sum_probs=86.7
Q ss_pred HhcccCCCceeeEeeccccchHHHHHHhhCC--CceEEEEeeccCC-CCChhHHHhc----cc--cccccccC-CCCCCC
Q 005981 510 RALHWKKMKLRNVLDMRAGFGGFAAALIEQK--FDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWC-EPFDTY 579 (666)
Q Consensus 510 ~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~--~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~c-e~~~~y 579 (666)
..+++..+ .+|||+|||.|.++.+|++.+ . +|+.+|. +.+++.+.++ |+ +.+.+... +.+. .
T Consensus 34 ~~l~~~~~--~~vLDiG~G~G~~~~~la~~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~ 105 (204)
T 3e05_A 34 SKLRLQDD--LVMWDIGAGSASVSIEASNLMPNG-----RIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD-D 105 (204)
T ss_dssp HHTTCCTT--CEEEEETCTTCHHHHHHHHHCTTS-----EEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT-T
T ss_pred HHcCCCCC--CEEEEECCCCCHHHHHHHHHCCCC-----EEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh-c
Confidence 34455544 469999999999999999885 4 5566663 5677766654 44 44443333 2222 2
Q ss_pred CCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC-hhHHHHHHHHHHhcCcEEEE
Q 005981 580 PRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS-IDVMDELQEIGKAMGWHVTL 643 (666)
Q Consensus 580 p~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~-~~~~~~~~~i~~~l~W~~~~ 643 (666)
..+||+|.+...+. ++..++.++.|+|||||.+++.+. .+....+.+++++..|++..
T Consensus 106 ~~~~D~i~~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~~~~ 164 (204)
T 3e05_A 106 LPDPDRVFIGGSGG------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEV 164 (204)
T ss_dssp SCCCSEEEESCCTT------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEECCCCc------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCCceeE
Confidence 26899999886543 568999999999999999999854 46788888999999986543
No 245
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.82 E-value=2.8e-09 Score=113.45 Aligned_cols=96 Identities=20% Similarity=0.139 Sum_probs=68.4
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCCCCCCCCeeEEEeccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSRC 347 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~Lpf~d~sFDlVv~s~~ 347 (666)
...+|||||||+|.++..++++ +++++|++. ++. + +.+...+.. ..+...|+. .+++ +||+|++..+
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~-~~~--~-~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~v 256 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAE-VVA--R-HRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKRI 256 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHH-HHT--T-CCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEESC
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecCHH-Hhh--c-ccccccCCCCCeEEEecCCC-CCCC--CCcEEEEehh
Confidence 4579999999999999888764 788899843 221 0 111111221 234445553 3444 8999999999
Q ss_pred ccccccCh--HHHHHHHHHhccCCeEEEEEEC
Q 005981 348 RINWTRDD--GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 348 l~h~~~d~--~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++| ++. ..+|++++++|||||.+++.+.
T Consensus 257 lh~~-~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 257 LHNW-GDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp GGGS-CHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred ccCC-CHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 8888 555 5999999999999999999864
No 246
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.82 E-value=1.3e-08 Score=98.08 Aligned_cols=93 Identities=16% Similarity=0.091 Sum_probs=62.8
Q ss_pred CCCeEEEECCCCchhHHHhcc-------------CCeEEEeCCcchHHHHHHHHHHHcCCCceEE-eecccCCC------
Q 005981 274 HIRVVMDAGCGVASFGAYLLP-------------RNVITMSIAPKDVHENQIQFALERGAPAMVA-AFATRRLP------ 333 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~-------------~~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~-~~d~e~Lp------ 333 (666)
+..+|||+|||+|.++..+++ .+|+++|+++... .....+. ..|.....
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----------~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----------LEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----------CTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc-----------CCCCeEEEeccCCCHHHHHHHH
Confidence 457999999999998887764 3599999998420 0112233 33433321
Q ss_pred --CCCCCeeEEEeccccc---ccccCh-------HHHHHHHHHhccCCeEEEEEEC
Q 005981 334 --YPSQAFDLIHCSRCRI---NWTRDD-------GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 334 --f~d~sFDlVv~s~~l~---h~~~d~-------~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++++||+|+|..+.+ ++..+. ..+++++.++|||||.|++...
T Consensus 91 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 91 EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 3456899999864322 222222 4789999999999999999864
No 247
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.82 E-value=6.7e-09 Score=98.99 Aligned_cols=138 Identities=20% Similarity=0.271 Sum_probs=89.3
Q ss_pred HHhcccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc----ccccc-ccCCCCCC
Q 005981 509 VRALHWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL----IGVMH-DWCEPFDT 578 (666)
Q Consensus 509 ~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl----ig~~~-~~ce~~~~ 578 (666)
.+.+....+ ..|||+|||.|.++.+|++.+. +|+.+|. +.+++.+.++ |+ +.+.+ +..+.+.
T Consensus 45 ~~~~~~~~~--~~vLdiG~G~G~~~~~~~~~~~-----~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~- 116 (194)
T 1dus_A 45 VENVVVDKD--DDILDLGCGYGVIGIALADEVK-----STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK- 116 (194)
T ss_dssp HHHCCCCTT--CEEEEETCTTSHHHHHHGGGSS-----EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT-
T ss_pred HHHcccCCC--CeEEEeCCCCCHHHHHHHHcCC-----eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc-
Confidence 344444433 4699999999999999999865 5666663 5666666654 43 33333 3333222
Q ss_pred CCCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh-hHHHHHHHHHHhcCcEEEEEeccCCCCCceEEE
Q 005981 579 YPRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI-DVMDELQEIGKAMGWHVTLRETAEGPHASYRIL 657 (666)
Q Consensus 579 yp~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~-~~~~~~~~i~~~l~W~~~~~~~~~~~~~~e~~l 657 (666)
+.+||+|.++..|.+. .-.+..++.++.|+|||||.+++.+.. +....+.+.++..-+++....... ...++
T Consensus 117 -~~~~D~v~~~~~~~~~--~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~ 189 (194)
T 1dus_A 117 -DRKYNKIITNPPIRAG--KEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETVTIKG----GYRVL 189 (194)
T ss_dssp -TSCEEEEEECCCSTTC--HHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEEEEET----TEEEE
T ss_pred -cCCceEEEECCCcccc--hhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEEEecCC----cEEEE
Confidence 4799999998766542 123568999999999999999998544 344445665555534444444332 35677
Q ss_pred EEEe
Q 005981 658 TADK 661 (666)
Q Consensus 658 ~~~k 661 (666)
.++|
T Consensus 190 ~~~k 193 (194)
T 1dus_A 190 KSKK 193 (194)
T ss_dssp EEEC
T ss_pred EEee
Confidence 7665
No 248
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.82 E-value=2.3e-08 Score=104.46 Aligned_cols=103 Identities=12% Similarity=0.044 Sum_probs=71.0
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHH-c---CCCceEEeecccC-CCCCCCCeeEEEe
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE-R---GAPAMVAAFATRR-LPYPSQAFDLIHC 344 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~-r---g~~~~~~~~d~e~-Lpf~d~sFDlVv~ 344 (666)
.+.+|||||||+|.++..+++. +|+++|+++.++..++..+... . .....+...|... ++..+++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 4579999999999999998865 7999999999888776544321 1 1123344444322 3334578999997
Q ss_pred ccccccccc-----ChHHHHHHHHHhccCCeEEEEEEC
Q 005981 345 SRCRINWTR-----DDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 345 s~~l~h~~~-----d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
... .++.. ....+++++.++|+|||.+++.+.
T Consensus 170 d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 170 DST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EC-----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 532 33211 225889999999999999999853
No 249
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.82 E-value=1.8e-08 Score=100.79 Aligned_cols=97 Identities=15% Similarity=0.128 Sum_probs=73.2
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCC--CceEEeecccCCCCCCCCeeEEEeccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~--~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~ 349 (666)
+..+|||+|||+|.++..+++. +|+++|+++.++..++...+ ..++ ...+...+.....+++++||+|++.
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~---- 165 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLK-KFNLGKNVKFFNVDFKDAEVPEGIFHAAFVD---- 165 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHH-HTTCCTTEEEECSCTTTSCCCTTCBSEEEEC----
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHH-HcCCCCcEEEEEcChhhcccCCCcccEEEEC----
Confidence 4579999999999998888753 89999999998887765443 3444 2234444555433356789999963
Q ss_pred ccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 350 NWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 350 h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
. +++..++.++.++|||||.+++..+
T Consensus 166 -~-~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 166 -V-REPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp -S-SCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred -C-cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 2 4667899999999999999999864
No 250
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.82 E-value=3.4e-09 Score=108.25 Aligned_cols=139 Identities=12% Similarity=0.125 Sum_probs=91.9
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhcc----------------------------------
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRG---------------------------------- 564 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erG---------------------------------- 564 (666)
.+|||+|||+|.++..++..|+ -+|+.+| ++.+++.+.++-
T Consensus 57 ~~vLDiGCG~G~~~~~~~~~~~----~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 57 DTLIDIGSGPTIYQVLAACDSF----QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp EEEEESSCTTCCGGGTTGGGTE----EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred ceEEEeCCCccHHHHHHHHhhh----cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 5699999999999888888764 2677777 467777665420
Q ss_pred -ccc-cc-cccCC--CCCCC-CCccceEEeccccccC-CCCCCHHHHHHHhhhcccCCeEEEEEeChh------------
Q 005981 565 -LIG-VM-HDWCE--PFDTY-PRTYDLLHAAGLFSVE-SKRCNMSTIMLEMDRMLRPGGHVYIRDSID------------ 625 (666)
Q Consensus 565 -lig-~~-~~~ce--~~~~y-p~tyDliha~~~f~~~-~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~------------ 625 (666)
-|. +. .|-.+ ++... ..+||+|.|..++.+. .+.-++..+|.+|.|+|||||+|++++...
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~ 212 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFS 212 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEee
Confidence 011 22 22222 12211 3699999999888763 333456789999999999999999985211
Q ss_pred ----HHHHHHHHHHhcCcEEEEEecc---CCC----CCceEEEEEEeC
Q 005981 626 ----VMDELQEIGKAMGWHVTLRETA---EGP----HASYRILTADKR 662 (666)
Q Consensus 626 ----~~~~~~~i~~~l~W~~~~~~~~---~~~----~~~e~~l~~~k~ 662 (666)
..+.+.+++..-..++.....- ... ....-+++|+|.
T Consensus 213 ~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~ 260 (263)
T 2a14_A 213 CVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKK 260 (263)
T ss_dssp CCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEEC
T ss_pred ccccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEec
Confidence 3567888888888876543221 100 123457888885
No 251
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.81 E-value=1e-08 Score=100.52 Aligned_cols=117 Identities=13% Similarity=0.141 Sum_probs=86.2
Q ss_pred eeeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhccccccccccCCCC-CCCC-CccceEEeccccccC
Q 005981 519 LRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRGLIGVMHDWCEPF-DTYP-RTYDLLHAAGLFSVE 595 (666)
Q Consensus 519 iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erGlig~~~~~ce~~-~~yp-~tyDliha~~~f~~~ 595 (666)
-.+|||+|||.|.++.+|++.|. +|+.+|. +.+++.+.++.. .+.+...+.+ ..++ .+||+|.+.+++.+.
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~-----~~~~~D~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~ 106 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKENGT-----RVSGIEAFPEAAEQAKEKLD-HVVLGDIETMDMPYEEEQFDCVIFGDVLEHL 106 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTTTC-----EEEEEESSHHHHHHHHTTSS-EEEESCTTTCCCCSCTTCEEEEEEESCGGGS
T ss_pred CCcEEEeCCCCCHHHHHHHhcCC-----eEEEEeCCHHHHHHHHHhCC-cEEEcchhhcCCCCCCCccCEEEECChhhhc
Confidence 35799999999999999999875 5666663 567777766643 3333333321 3344 899999999999887
Q ss_pred CCCCCHHHHHHHhhhcccCCeEEEEEeCh------------------------------hHHHHHHHHHHhcCcEEEEE
Q 005981 596 SKRCNMSTIMLEMDRMLRPGGHVYIRDSI------------------------------DVMDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 596 ~~~c~~~~~l~E~dRiLRPgG~~ii~d~~------------------------------~~~~~~~~i~~~l~W~~~~~ 644 (666)
.+ ...+|.++.|+|||||++++.... -..+.++++++...+++...
T Consensus 107 ~~---~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 182 (230)
T 3cc8_A 107 FD---PWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKV 182 (230)
T ss_dssp SC---HHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEE
T ss_pred CC---HHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEE
Confidence 64 379999999999999999997421 12567778888888876544
No 252
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.81 E-value=4.1e-09 Score=108.72 Aligned_cols=97 Identities=11% Similarity=0.172 Sum_probs=73.9
Q ss_pred eeeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc----cc-cccccccCCCCCCCCCccceEEec
Q 005981 519 LRNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR----GL-IGVMHDWCEPFDTYPRTYDLLHAA 589 (666)
Q Consensus 519 iRnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er----Gl-ig~~~~~ce~~~~yp~tyDliha~ 589 (666)
-.+|||+|||+|.++..|++. +. +|+.+|. +.+++.+.++ ++ +.+..+-++.++ ++.+||+|+|.
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~ 96 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEGS-----KYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-LNDKYDIAICH 96 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTTC-----EEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCC-CSSCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCC-----EEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcC-cCCCeeEEEEC
Confidence 357999999999999999987 45 4555663 5667666554 22 445555555544 47899999999
Q ss_pred cccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh
Q 005981 590 GLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI 624 (666)
Q Consensus 590 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~ 624 (666)
.++.+..+ ...+|.++.|+|||||++++.+..
T Consensus 97 ~~l~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 97 AFLLHMTT---PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SCGGGCSS---HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ChhhcCCC---HHHHHHHHHHHcCCCCEEEEEecc
Confidence 98888754 479999999999999999998654
No 253
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.81 E-value=5.3e-09 Score=112.43 Aligned_cols=94 Identities=16% Similarity=0.211 Sum_probs=70.0
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEeccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~ 349 (666)
...+|||||||+|.++..++++ +++++|+ +.++..+ ++. ....+...|+.. +++.+ |+|++..++|
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a-----~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~vlh 272 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDA-----PAF-SGVEHLGGDMFD-GVPKG--DAIFIKWICH 272 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTC-----CCC-TTEEEEECCTTT-CCCCC--SEEEEESCGG
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhh-----hhc-CCCEEEecCCCC-CCCCC--CEEEEechhh
Confidence 4579999999999999888763 7899998 6555332 221 223455556554 66644 9999999988
Q ss_pred ccccC-hHHHHHHHHHhccCCeEEEEEEC
Q 005981 350 NWTRD-DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 350 h~~~d-~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+|.++ ...+|++++++|||||.+++.+.
T Consensus 273 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 273 DWSDEHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp GBCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 89432 23889999999999999999865
No 254
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.81 E-value=6.4e-09 Score=102.79 Aligned_cols=97 Identities=18% Similarity=0.160 Sum_probs=71.0
Q ss_pred CCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecc-cCCC-CC----CCCeeE
Q 005981 275 IRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFAT-RRLP-YP----SQAFDL 341 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~-e~Lp-f~----d~sFDl 341 (666)
..+|||||||+|.++..++.. +|+++|+++.++..++... ...++. ..+...+. +.++ +. .++||+
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYW-EKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHH-HHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHH-HHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 368999999999999888764 7999999999998877544 444543 33444443 2222 11 178999
Q ss_pred EEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 342 Vv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
|++.. ...+...++.++.++|||||++++..
T Consensus 144 v~~~~----~~~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 144 IYIDA----DKANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp EEECS----CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECC----CHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 99543 23456789999999999999999975
No 255
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.81 E-value=1.5e-08 Score=109.56 Aligned_cols=112 Identities=15% Similarity=0.153 Sum_probs=78.0
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCCc--eEEeecccC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPA--MVAAFATRR 331 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~~--~~~~~d~e~ 331 (666)
.|.+.|.+.... .++++|||||||+|.++...++. +|+|+|.++ ++..|+ +.++.+++.. .+...+++.
T Consensus 70 aY~~Ai~~~~~~----~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~-~~~~~n~~~~~i~~i~~~~~~ 143 (376)
T 4hc4_A 70 AYRLGILRNWAA----LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAR-EVVRFNGLEDRVHVLPGPVET 143 (376)
T ss_dssp HHHHHHHTTHHH----HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHH-HHHHHTTCTTTEEEEESCTTT
T ss_pred HHHHHHHhCHHh----cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHH-HHHHHcCCCceEEEEeeeeee
Confidence 455556543332 13478999999999888766654 799999986 666654 5666677653 444556778
Q ss_pred CCCCCCCeeEEEecccc--cccccChHHHHHHHHHhccCCeEEEEE
Q 005981 332 LPYPSQAFDLIHCSRCR--INWTRDDGILLLEVNRMLRAGGYFAWA 375 (666)
Q Consensus 332 Lpf~d~sFDlVv~s~~l--~h~~~d~~~~L~el~RvLkPGG~lv~s 375 (666)
+.++ +.||+|+|..+. +..-.....++....|.|||||.++-+
T Consensus 144 ~~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 144 VELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp CCCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred ecCC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCc
Confidence 8776 689999973321 222234668888999999999998654
No 256
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.81 E-value=3e-09 Score=108.81 Aligned_cols=119 Identities=12% Similarity=-0.003 Sum_probs=85.1
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhcc-c----------------------cccccccCCC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRG-L----------------------IGVMHDWCEP 575 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erG-l----------------------ig~~~~~ce~ 575 (666)
..|||+|||.|.++.+|+++|+ +|+.+| ++.+++.+.++. + |.+++.-.+.
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~-----~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGH-----TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTC-----EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CeEEEeCCCCcHHHHHHHHCCC-----eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 3599999999999999999997 678888 468888886542 1 3333333222
Q ss_pred CCCCC-CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEE-E-e--C--------hhHHHHHHHHHHhcCcEEE
Q 005981 576 FDTYP-RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYI-R-D--S--------IDVMDELQEIGKAMGWHVT 642 (666)
Q Consensus 576 ~~~yp-~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii-~-d--~--------~~~~~~~~~i~~~l~W~~~ 642 (666)
++.-+ .+||+|.+.++|.+.. ......++.||.|+|||||.+++ + . . .-..++++.++.. .|++.
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~-~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~ 222 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAIN-PGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQ 222 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSC-GGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEE
T ss_pred CCcccCCCEEEEEEhhhhhhCC-HHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEE
Confidence 33212 7999999998888775 34557899999999999999964 3 1 0 0135778888877 58876
Q ss_pred EEe
Q 005981 643 LRE 645 (666)
Q Consensus 643 ~~~ 645 (666)
...
T Consensus 223 ~~~ 225 (252)
T 2gb4_A 223 CLE 225 (252)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 257
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.80 E-value=3.4e-09 Score=108.12 Aligned_cols=95 Identities=13% Similarity=0.266 Sum_probs=72.6
Q ss_pred eeEeeccccchHHHHHHhhC--CCceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCCCCCCccceEEecc
Q 005981 520 RNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFDTYPRTYDLLHAAG 590 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~~yp~tyDliha~~ 590 (666)
..|||+|||.|.++.+|++. +. .|+.+|. +.+++.+.++ |+ +.+.....+.++.-+.+||+|++..
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 113 (276)
T 3mgg_A 39 AKVLEAGCGIGAQTVILAKNNPDA-----EITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCF 113 (276)
T ss_dssp CEEEETTCTTSHHHHHHHHHCTTS-----EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEES
T ss_pred CeEEEecCCCCHHHHHHHHhCCCC-----EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEec
Confidence 46999999999999999988 44 5566663 5677766655 44 4444444444443348999999999
Q ss_pred ccccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 591 LFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 591 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
++.+..+ .+.+|.++.|+|||||++++.+
T Consensus 114 ~l~~~~~---~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 114 VLEHLQS---PEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp CGGGCSC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhcCC---HHHHHHHHHHHcCCCcEEEEEE
Confidence 9888765 4699999999999999999975
No 258
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.80 E-value=2e-09 Score=110.82 Aligned_cols=99 Identities=20% Similarity=0.260 Sum_probs=73.0
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhcc----c------cccccccCCCCC---CCCCccce
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRG----L------IGVMHDWCEPFD---TYPRTYDL 585 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erG----l------ig~~~~~ce~~~---~yp~tyDl 585 (666)
.+|||+|||+|.++..|++.|. +|+.+| ++.+++.+.++. . +-+...-.+.++ .-+.+||+
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~ 133 (293)
T 3thr_A 59 HRVLDVACGTGVDSIMLVEEGF-----SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA 133 (293)
T ss_dssp CEEEETTCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred CEEEEecCCCCHHHHHHHHCCC-----eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEE
Confidence 4699999999999999999986 677777 367888886642 1 112222212222 22389999
Q ss_pred EEec-cccccCCC----CCCHHHHHHHhhhcccCCeEEEEEeC
Q 005981 586 LHAA-GLFSVESK----RCNMSTIMLEMDRMLRPGGHVYIRDS 623 (666)
Q Consensus 586 iha~-~~f~~~~~----~c~~~~~l~E~dRiLRPgG~~ii~d~ 623 (666)
|+|. .+|.|..+ ......+|.++.|+|||||++++...
T Consensus 134 V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 134 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp EEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9998 78888776 33467999999999999999999743
No 259
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.80 E-value=1.3e-08 Score=108.24 Aligned_cols=103 Identities=8% Similarity=-0.062 Sum_probs=73.9
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCC---ceEEeecccCCCC----CCCCeeEEEe
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP---AMVAAFATRRLPY----PSQAFDLIHC 344 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~---~~~~~~d~e~Lpf----~d~sFDlVv~ 344 (666)
+..+|||+|||+|.++..++.. +|+++|+++.++..++.+.. ..++. ..+...|+..+.. ..++||+|++
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~-~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQV-LAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH-HHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHH-HcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 3468999999999999988865 89999999999988875444 34543 3444445443321 1468999998
Q ss_pred cccc---------cccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 345 SRCR---------INWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 345 s~~l---------~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.... .++..+...++.++.++|+|||++++...
T Consensus 232 dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 232 DPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp CCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred CCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 5332 12223456889999999999999887754
No 260
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.80 E-value=4.8e-09 Score=102.03 Aligned_cols=134 Identities=16% Similarity=0.229 Sum_probs=88.7
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhcc----ccccccccCCCCCCCC-CccceEEeccccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRG----LIGVMHDWCEPFDTYP-RTYDLLHAAGLFS 593 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erG----lig~~~~~ce~~~~yp-~tyDliha~~~f~ 593 (666)
..|||+|||.|.++..|++.|.. +|+.+| ++.+++.+.++. -+.+.+.-.+.++ ++ .+||+|.+.++|.
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~----~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~-~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFP----NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLD-FPSASFDVVLEKGTLD 118 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCC----CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCC-SCSSCEEEEEEESHHH
T ss_pred CeEEEECCCCcHHHHHHHHcCCC----cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCC-CCCCcccEEEECcchh
Confidence 35999999999999999998751 455566 356777776653 2444444434443 44 8999999988876
Q ss_pred cCC------------CCCCHHHHHHHhhhcccCCeEEEEEeChhHHHHHHHHH--HhcCcEEEEEeccCCCCCceEEEEE
Q 005981 594 VES------------KRCNMSTIMLEMDRMLRPGGHVYIRDSIDVMDELQEIG--KAMGWHVTLRETAEGPHASYRILTA 659 (666)
Q Consensus 594 ~~~------------~~c~~~~~l~E~dRiLRPgG~~ii~d~~~~~~~~~~i~--~~l~W~~~~~~~~~~~~~~e~~l~~ 659 (666)
+.. +..+...+|.|+.|+|||||.+++.+.....- .+.++ ....|+......+++ ....+.++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 195 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPHF-RTRHYAQAYYGWSLRHATYGSG--FHFHLYLM 195 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHHH-HHHHHCCGGGCEEEEEEEESGG--GCEEEEEE
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcHH-HHHHHhccccCcEEEEEEecCc--ceEEEEEE
Confidence 533 11245799999999999999999987654221 22333 344687765544333 23456666
Q ss_pred Ee
Q 005981 660 DK 661 (666)
Q Consensus 660 ~k 661 (666)
+|
T Consensus 196 ~~ 197 (215)
T 2pxx_A 196 HK 197 (215)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 261
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.80 E-value=1.9e-08 Score=104.07 Aligned_cols=103 Identities=12% Similarity=0.061 Sum_probs=73.3
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHH-cCC---CceEEeecccC-CCCCCCCeeEEEe
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE-RGA---PAMVAAFATRR-LPYPSQAFDLIHC 344 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~-rg~---~~~~~~~d~e~-Lpf~d~sFDlVv~ 344 (666)
.+.+|||||||+|.++..+++. +|+++|+++.++..++..+... .+. ...+...|... ++..+++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 4579999999999999998865 7999999999988777544331 122 22344444322 3334578999997
Q ss_pred cccccccccC----hHHHHHHHHHhccCCeEEEEEEC
Q 005981 345 SRCRINWTRD----DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 345 s~~l~h~~~d----~~~~L~el~RvLkPGG~lv~st~ 377 (666)
... .++... ...+++++.++|+|||.+++...
T Consensus 155 d~~-~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 155 DST-EPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp SCS-SCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred CCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 543 343221 25899999999999999999853
No 262
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.79 E-value=7.2e-09 Score=111.29 Aligned_cols=94 Identities=18% Similarity=0.200 Sum_probs=70.6
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEeccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~ 349 (666)
...+|||||||+|.++..++++ +++++|+ +.++..+ ++. ....+...|+.. +++.+ |+|++..++|
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a-----~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~vlh 270 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEA-----PQF-PGVTHVGGDMFK-EVPSG--DTILMKWILH 270 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTC-----CCC-TTEEEEECCTTT-CCCCC--SEEEEESCGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhh-----hhc-CCeEEEeCCcCC-CCCCC--CEEEehHHhc
Confidence 4579999999999999888753 7899998 6554322 221 233455556655 66654 9999999988
Q ss_pred ccccC-hHHHHHHHHHhccCCeEEEEEEC
Q 005981 350 NWTRD-DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 350 h~~~d-~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+|.++ ...+|++++++|||||++++.+.
T Consensus 271 ~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 271 DWSDQHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp GSCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 89432 34899999999999999999864
No 263
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.79 E-value=1e-08 Score=107.18 Aligned_cols=115 Identities=11% Similarity=-0.029 Sum_probs=86.1
Q ss_pred eeEeeccccchHHHHHHhhC-CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCCCCCCC-CccceEEec
Q 005981 520 RNVLDMRAGFGGFAAALIEQ-KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEPFDTYP-RTYDLLHAA 589 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~-~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~~~~yp-~tyDliha~ 589 (666)
..|||+|||.|.++..|+++ ++ .|+.+|. +.+++.+.++ |+ +.+...-.+.++ ++ .+||+|.+.
T Consensus 119 ~~vLDiGcG~G~~~~~la~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V~~~ 192 (312)
T 3vc1_A 119 DTLVDAGCGRGGSMVMAHRRFGS-----RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP-FDKGAVTASWNN 192 (312)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCC-----EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-CCTTCEEEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHHcCC-----EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC-CCCCCEeEEEEC
Confidence 46999999999999999998 76 4555663 5677666654 54 455555555554 44 899999999
Q ss_pred cccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC----hh-------------------HHHHHHHHHHhcCcEEEEE
Q 005981 590 GLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS----ID-------------------VMDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 590 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~----~~-------------------~~~~~~~i~~~l~W~~~~~ 644 (666)
.++.+.. ...+|.|+.|+|||||++++.+. .. ..+.+++++++-.+++...
T Consensus 193 ~~l~~~~----~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~ 266 (312)
T 3vc1_A 193 ESTMYVD----LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTI 266 (312)
T ss_dssp SCGGGSC----HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEE
T ss_pred CchhhCC----HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEE
Confidence 9988873 68999999999999999999741 10 2466778888888876543
No 264
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.79 E-value=1e-08 Score=101.24 Aligned_cols=97 Identities=13% Similarity=0.105 Sum_probs=70.5
Q ss_pred CCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccC-CC-CC---CCCeeEE
Q 005981 275 IRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LP-YP---SQAFDLI 342 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~-Lp-f~---d~sFDlV 342 (666)
..+|||||||+|.++..+++. +|+++|+++.++..++... ...+.. ..+...+... ++ +. .++||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNI-ERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHH-HHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 479999999999999888764 7999999999988776544 344543 2344444322 21 11 2679999
Q ss_pred EecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 343 HCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 343 v~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
++... ......++.++.++|||||++++..
T Consensus 138 ~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 138 FIDAD----KQNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp EECSC----GGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred EEcCC----cHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 97543 2345689999999999999998874
No 265
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.78 E-value=1.9e-08 Score=98.30 Aligned_cols=105 Identities=13% Similarity=0.112 Sum_probs=69.6
Q ss_pred HHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCC-
Q 005981 258 YLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY- 334 (666)
Q Consensus 258 ~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf- 334 (666)
.+.++.+....+ .++.+|||+|||+|.++..++++ +|+|+|+++... .....+...|+...+.
T Consensus 12 KL~ei~~~~~~~---~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~-----------~~~v~~~~~D~~~~~~~ 77 (191)
T 3dou_A 12 KLEFLLDRYRVV---RKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEE-----------IAGVRFIRCDIFKETIF 77 (191)
T ss_dssp HHHHHHHHHCCS---CTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCC-----------CTTCEEEECCTTSSSHH
T ss_pred HHHHHHHHcCCC---CCCCEEEEEeecCCHHHHHHHHcCCcEEEEecccccc-----------CCCeEEEEccccCHHHH
Confidence 344444444322 34589999999999999999876 899999998521 0123344555555431
Q ss_pred -------C---CCCeeEEEecccccccc----cC-------hHHHHHHHHHhccCCeEEEEEEC
Q 005981 335 -------P---SQAFDLIHCSRCRINWT----RD-------DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 335 -------~---d~sFDlVv~s~~l~h~~----~d-------~~~~L~el~RvLkPGG~lv~st~ 377 (666)
. .++||+|+|... .... .+ ...++.++.++|||||.|++..+
T Consensus 78 ~~~~~~~~~~~~~~~D~Vlsd~~-~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 78 DDIDRALREEGIEKVDDVVSDAM-AKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp HHHHHHHHHHTCSSEEEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhhcccCCcceEEecCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 1 148999998542 1111 11 23678889999999999998864
No 266
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.78 E-value=6.8e-09 Score=105.42 Aligned_cols=97 Identities=25% Similarity=0.309 Sum_probs=72.9
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhccccccccccCCCCCCCCCccceEEeccccccCCCC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRGLIGVMHDWCEPFDTYPRTYDLLHAAGLFSVESKR 598 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erGlig~~~~~ce~~~~yp~tyDliha~~~f~~~~~~ 598 (666)
.+|||+|||.|.++..|++.|. +|+.+|. +.+++.+.++..-.+.....+.++.-+.+||+|.+.+++.+...
T Consensus 56 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~- 129 (260)
T 2avn_A 56 CRVLDLGGGTGKWSLFLQERGF-----EVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVE- 129 (260)
T ss_dssp CEEEEETCTTCHHHHHHHTTTC-----EEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCS-
T ss_pred CeEEEeCCCcCHHHHHHHHcCC-----eEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhccc-
Confidence 4799999999999999999976 5666663 67888888875411333333444422389999999876655432
Q ss_pred CCHHHHHHHhhhcccCCeEEEEEeC
Q 005981 599 CNMSTIMLEMDRMLRPGGHVYIRDS 623 (666)
Q Consensus 599 c~~~~~l~E~dRiLRPgG~~ii~d~ 623 (666)
+...+|.|+.|+|||||.+++...
T Consensus 130 -~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 130 -NKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -cHHHHHHHHHHHcCCCeEEEEEeC
Confidence 268999999999999999999753
No 267
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.78 E-value=1.4e-08 Score=99.03 Aligned_cols=116 Identities=16% Similarity=0.211 Sum_probs=85.6
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCCCCCCccceEEecccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFDTYPRTYDLLHAAGLF 592 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~~yp~tyDliha~~~f 592 (666)
..|||+|||.|.++.+|++.|. .+|+.+|. +.+++.+.++ |+ +.+.+.-.+. ..+.+||+|.+...+
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~~~~~fD~i~~~~~~ 135 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKLGA----KSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA--DVDGKFDLIVANILA 135 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC----SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT--TCCSCEEEEEEESCH
T ss_pred CEEEEECCCCCHHHHHHHHCCC----CEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc--cCCCCceEEEECCcH
Confidence 4699999999999999998864 25666663 5677776665 44 4444333322 235999999998665
Q ss_pred ccCCCCCCHHHHHHHhhhcccCCeEEEEEe-ChhHHHHHHHHHHhcCcEEEEEecc
Q 005981 593 SVESKRCNMSTIMLEMDRMLRPGGHVYIRD-SIDVMDELQEIGKAMGWHVTLRETA 647 (666)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d-~~~~~~~~~~i~~~l~W~~~~~~~~ 647 (666)
.+ +..+|.++.|+|||||++++.+ .....+.+.++++...++.......
T Consensus 136 ~~------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~ 185 (205)
T 3grz_A 136 EI------LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKMRA 185 (205)
T ss_dssp HH------HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEEEEE
T ss_pred HH------HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEeecc
Confidence 43 4688999999999999999985 3446788889999999988665443
No 268
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.78 E-value=4.7e-09 Score=104.73 Aligned_cols=97 Identities=9% Similarity=0.100 Sum_probs=71.8
Q ss_pred CCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccC-CCCC--CCCeeEEEec
Q 005981 275 IRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LPYP--SQAFDLIHCS 345 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~-Lpf~--d~sFDlVv~s 345 (666)
..+|||||||+|.++..++.. +|+++|+++.++..++.... ..+.. ..+...+... ++.. +++||+|++.
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVK-ALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHH-HTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 468999999999988877653 89999999998887765443 34442 3344444443 2322 5789999976
Q ss_pred ccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 346 RCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 346 ~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
... .+...++.++.++|||||.+++.+
T Consensus 134 ~~~----~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 134 AAK----GQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp GGG----SCHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCH----HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 442 466799999999999999999984
No 269
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.78 E-value=1.7e-08 Score=106.62 Aligned_cols=102 Identities=13% Similarity=0.034 Sum_probs=68.1
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHH-cC---CCceEEeecccC-CCCCCCCeeEEEe
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE-RG---APAMVAAFATRR-LPYPSQAFDLIHC 344 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~-rg---~~~~~~~~d~e~-Lpf~d~sFDlVv~ 344 (666)
...+|||||||+|.++..+++. +|+++|+++.++..++..+... .+ ....+...|... ++..+++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 4579999999999999999865 7999999999887776543221 01 122344444332 3334678999997
Q ss_pred cccccccccCh----HHHHHHHHHhccCCeEEEEEE
Q 005981 345 SRCRINWTRDD----GILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 345 s~~l~h~~~d~----~~~L~el~RvLkPGG~lv~st 376 (666)
... .++.... ..+++++.++|+|||.+++..
T Consensus 188 d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 543 4442221 578999999999999999985
No 270
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.78 E-value=3.1e-08 Score=104.01 Aligned_cols=103 Identities=13% Similarity=0.092 Sum_probs=71.4
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHH-cC---CCceEEeecccC-CCCCCCCeeEEEe
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE-RG---APAMVAAFATRR-LPYPSQAFDLIHC 344 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~-rg---~~~~~~~~d~e~-Lpf~d~sFDlVv~ 344 (666)
...+|||||||+|.++..++++ +|+++|+++.++..++..+... .+ ....+...|... ++..+++||+|++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 4579999999999999999865 7999999999988777554331 11 223344444332 3344688999997
Q ss_pred cccccccccC----hHHHHHHHHHhccCCeEEEEEEC
Q 005981 345 SRCRINWTRD----DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 345 s~~l~h~~~d----~~~~L~el~RvLkPGG~lv~st~ 377 (666)
... .++... ...+++++.++|||||.+++...
T Consensus 175 d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 175 DSS-DPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp ECC------------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCC-CCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 543 433221 24789999999999999999863
No 271
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.78 E-value=5e-09 Score=108.62 Aligned_cols=93 Identities=11% Similarity=0.070 Sum_probs=71.9
Q ss_pred eeeEeeccccchHHHHHHhh---CCCceEEEEeeccCC-CCChhHHHhc-----cc---cccccccCCCCCCCC------
Q 005981 519 LRNVLDMRAGFGGFAAALIE---QKFDCWVMNVVPVSG-FNTLPVIYDR-----GL---IGVMHDWCEPFDTYP------ 580 (666)
Q Consensus 519 iRnvlD~g~G~Ggfaa~L~~---~~~~vwvmnv~~~~~-~~~l~~~~er-----Gl---ig~~~~~ce~~~~yp------ 580 (666)
-..|||+|||.|.++..|++ .+. +|+.+|. +.+++.+.++ |. +.+.+.-.+.++.-.
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 111 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPFE-----QIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDK 111 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCCS-----EEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTS
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCC-----EEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccC
Confidence 45699999999999999994 555 6667763 6778777775 32 555555555544222
Q ss_pred CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEE
Q 005981 581 RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYI 620 (666)
Q Consensus 581 ~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii 620 (666)
.+||+|+|..++.+. +...+|.++.|+|||||++++
T Consensus 112 ~~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 112 QKIDMITAVECAHWF----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp SCEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred CCeeEEeHhhHHHHh----CHHHHHHHHHHhcCCCcEEEE
Confidence 699999999888877 568999999999999999999
No 272
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.78 E-value=7.1e-09 Score=104.71 Aligned_cols=93 Identities=14% Similarity=0.079 Sum_probs=68.2
Q ss_pred CCeEEEECCCCchhHHHhcc--------CCeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCC---CCCC-CCeeEE
Q 005981 275 IRVVMDAGCGVASFGAYLLP--------RNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL---PYPS-QAFDLI 342 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~--------~~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~L---pf~d-~sFDlV 342 (666)
..+|||||||+|..+..|++ .+|+|+|+++.++..++ .......+...|...+ ++.. .+||+|
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~-----~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I 156 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA-----SDMENITLHQGDCSDLTTFEHLREMAHPLI 156 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-----GGCTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-----ccCCceEEEECcchhHHHHHhhccCCCCEE
Confidence 36899999999988887653 38999999999876553 2222334555565553 5433 479999
Q ss_pred EecccccccccChHHHHHHHHH-hccCCeEEEEEE
Q 005981 343 HCSRCRINWTRDDGILLLEVNR-MLRAGGYFAWAA 376 (666)
Q Consensus 343 v~s~~l~h~~~d~~~~L~el~R-vLkPGG~lv~st 376 (666)
++... | .+...+|.++.| +|||||++++..
T Consensus 157 ~~d~~--~--~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 157 FIDNA--H--ANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp EEESS--C--SSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred EECCc--h--HhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 97544 3 366789999998 999999999974
No 273
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.77 E-value=1.5e-08 Score=107.10 Aligned_cols=98 Identities=16% Similarity=0.146 Sum_probs=68.4
Q ss_pred CCCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHc------C-----CCceEEeecccCC--CCC
Q 005981 274 HIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALER------G-----APAMVAAFATRRL--PYP 335 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~r------g-----~~~~~~~~d~e~L--pf~ 335 (666)
++.+|||+|||+|.++..++. .+|+++|+++.++..++.+..... + ....+...|...+ +++
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~ 184 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIK 184 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccC
Confidence 457999999999998887764 379999999999988876554321 1 1234445565555 456
Q ss_pred CCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 336 SQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 336 d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++||+|++.. .++..++.++.++|||||.+++...
T Consensus 185 ~~~fD~V~~~~------~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 185 SLTFDAVALDM------LNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp ---EEEEEECS------SSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred CCCeeEEEECC------CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 77899999743 2334589999999999999998853
No 274
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.77 E-value=1.9e-08 Score=99.76 Aligned_cols=91 Identities=19% Similarity=0.209 Sum_probs=58.7
Q ss_pred eEeeccccchHHHHHHhhCC--CceEEEEeeccCC-CC----ChhHHHhccccc-cccccCCC--CCCCCCccceEEecc
Q 005981 521 NVLDMRAGFGGFAAALIEQK--FDCWVMNVVPVSG-FN----TLPVIYDRGLIG-VMHDWCEP--FDTYPRTYDLLHAAG 590 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~~--~~vwvmnv~~~~~-~~----~l~~~~erGlig-~~~~~ce~--~~~yp~tyDliha~~ 590 (666)
+|||+|||+|.++..|++.. . .|+.+|. +. +++.+.++.-+. +..|..+. +..++.+||+|.|+.
T Consensus 60 ~VLDlGcGtG~~~~~la~~~~~~-----~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 134 (210)
T 1nt2_A 60 RVLYLGAASGTTVSHLADIVDEG-----IIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI 134 (210)
T ss_dssp EEEEETCTTSHHHHHHHHHTTTS-----EEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC
T ss_pred EEEEECCcCCHHHHHHHHHcCCC-----EEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEec
Confidence 59999999999999998762 2 4566663 33 345454442222 22333221 123458999999872
Q ss_pred ccccCCCCCCHHHHHHHhhhcccCCeEEEEE
Q 005981 591 LFSVESKRCNMSTIMLEMDRMLRPGGHVYIR 621 (666)
Q Consensus 591 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~ 621 (666)
.. .-....++.|+.|+|||||.+++.
T Consensus 135 --~~---~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 135 --AQ---KNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp --CS---TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --cC---hhHHHHHHHHHHHHhCCCCEEEEE
Confidence 11 112235689999999999999997
No 275
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.77 E-value=2.2e-08 Score=103.97 Aligned_cols=103 Identities=15% Similarity=0.102 Sum_probs=71.5
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHc----CCCceEEeecccC-CCCCCCCeeEEEe
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALER----GAPAMVAAFATRR-LPYPSQAFDLIHC 344 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~r----g~~~~~~~~d~e~-Lpf~d~sFDlVv~ 344 (666)
.+.+|||||||+|.++..+++. +|+++|+++.++..++..+.... .....+...|... ++..+++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 4579999999999999999865 79999999988876654332110 1122344444332 2223578999997
Q ss_pred cccccccccC--h--HHHHHHHHHhccCCeEEEEEEC
Q 005981 345 SRCRINWTRD--D--GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 345 s~~l~h~~~d--~--~~~L~el~RvLkPGG~lv~st~ 377 (666)
... .++... . ..+++++.++|+|||.+++...
T Consensus 158 d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 158 DSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp ECC-CTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 543 333222 1 5899999999999999999854
No 276
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.77 E-value=8.3e-09 Score=100.09 Aligned_cols=114 Identities=17% Similarity=0.195 Sum_probs=81.9
Q ss_pred eEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc-cccccccCCCCCCCCCccceEEecccccc
Q 005981 521 NVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL-IGVMHDWCEPFDTYPRTYDLLHAAGLFSV 594 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl-ig~~~~~ce~~~~yp~tyDliha~~~f~~ 594 (666)
+|||+|||.|.++.+|++.|. +|+.+|. +.+++.+.++ |+ +.+.....+.++.-+.+||+|.+. +.+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~--~~~ 104 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY-----EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSI--FCH 104 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC-----EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE--CCC
T ss_pred CEEEECCCCCHhHHHHHhCCC-----eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEE--hhc
Confidence 799999999999999999976 6677774 5677777665 43 444444444443223899999985 444
Q ss_pred CCCCCCHHHHHHHhhhcccCCeEEEEEeC----h-------------hHHHHHHHHHHhcCcEEEEE
Q 005981 595 ESKRCNMSTIMLEMDRMLRPGGHVYIRDS----I-------------DVMDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 595 ~~~~c~~~~~l~E~dRiLRPgG~~ii~d~----~-------------~~~~~~~~i~~~l~W~~~~~ 644 (666)
. ...+...+|.++.|+|||||++++.+. . -..++++++++ .|++...
T Consensus 105 ~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~ 168 (202)
T 2kw5_A 105 L-PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIA 168 (202)
T ss_dssp C-CHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEE
T ss_pred C-CHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEE
Confidence 4 223457899999999999999999842 1 12577888888 8887543
No 277
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.77 E-value=1.7e-08 Score=106.45 Aligned_cols=103 Identities=15% Similarity=0.193 Sum_probs=73.4
Q ss_pred CCCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCCCCCCCeeEEEeccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYPSQAFDLIHCSRC 347 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lpf~d~sFDlVv~s~~ 347 (666)
++.+|||+|||+|..+..+++ ..|+++|+++.++..++.+. ...++. ..+...|...++..+++||+|++...
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~-~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~P 196 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNL-SRLGVLNVILFHSSSLHIGELNVEFDKILLDAP 196 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHH-HHHTCCSEEEESSCGGGGGGGCCCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHH-HHhCCCeEEEEECChhhcccccccCCEEEEeCC
Confidence 457999999999998888874 27999999999988776544 344553 34555566666544578999997321
Q ss_pred -----ccccccC----------------hHHHHHHHHHhccCCeEEEEEEC
Q 005981 348 -----RINWTRD----------------DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 348 -----l~h~~~d----------------~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.++-.++ ...+|.++.++|||||.+++++.
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 1111111 14789999999999999999875
No 278
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.76 E-value=6.4e-09 Score=110.73 Aligned_cols=93 Identities=14% Similarity=0.181 Sum_probs=70.7
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEeccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~ 349 (666)
...+|||||||+|.++..++++ +++++|+ +.++..++ +.. ...+...|+.. +++ .||+|++..+++
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~~~-~v~~~~~d~~~-~~p--~~D~v~~~~~lh 257 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLS-----GSN-NLTYVGGDMFT-SIP--NADAVLLKYILH 257 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----CBT-TEEEEECCTTT-CCC--CCSEEEEESCGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcc-----cCC-CcEEEeccccC-CCC--CccEEEeehhhc
Confidence 4479999999999999888753 7999999 76664332 211 23344455544 555 399999999988
Q ss_pred ccccChH--HHHHHHHHhccC---CeEEEEEEC
Q 005981 350 NWTRDDG--ILLLEVNRMLRA---GGYFAWAAQ 377 (666)
Q Consensus 350 h~~~d~~--~~L~el~RvLkP---GG~lv~st~ 377 (666)
|| .+.. .+|+++.++||| ||.+++.+.
T Consensus 258 ~~-~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 258 NW-TDKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp GS-CHHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred cC-CHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 88 5555 999999999999 999999864
No 279
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.76 E-value=1.6e-08 Score=107.15 Aligned_cols=114 Identities=14% Similarity=0.112 Sum_probs=75.3
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHH-c---CCCceEEeecccC-CCCCCCCeeEEEe
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE-R---GAPAMVAAFATRR-LPYPSQAFDLIHC 344 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~-r---g~~~~~~~~d~e~-Lpf~d~sFDlVv~ 344 (666)
.+.+|||||||+|.++..+++. +|+++|+++.++..++..+... . .....+...|... ++..+++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 4579999999999999998865 7999999999887776443220 1 1122344444322 2223578999997
Q ss_pred ccccccccc--Ch--HHHHHHHHHhccCCeEEEEEECCCCCCHHHHHH
Q 005981 345 SRCRINWTR--DD--GILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEE 388 (666)
Q Consensus 345 s~~l~h~~~--d~--~~~L~el~RvLkPGG~lv~st~P~~~~~~el~~ 388 (666)
... .++.. .. ..+++++.++|||||.+++.....+.....+..
T Consensus 196 d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~ 242 (321)
T 2pt6_A 196 DSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKN 242 (321)
T ss_dssp ECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHH
T ss_pred CCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHH
Confidence 542 33321 11 688999999999999999975433333333333
No 280
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.76 E-value=1.1e-08 Score=108.19 Aligned_cols=101 Identities=12% Similarity=0.153 Sum_probs=70.2
Q ss_pred CeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCC--CCCCCCeeEEEeccccc
Q 005981 276 RVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL--PYPSQAFDLIHCSRCRI 349 (666)
Q Consensus 276 ~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~L--pf~d~sFDlVv~s~~l~ 349 (666)
.+|||||||+|.++.+++++ +|+++|+++.++..++..+.........+...|...+ .+++++||+|++... .
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~-~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVF-A 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCS-T
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCC-C
Confidence 48999999999999998862 7999999999887665433221111233444453332 245689999997543 3
Q ss_pred ccccC----hHHHHHHHHHhccCCeEEEEEEC
Q 005981 350 NWTRD----DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 350 h~~~d----~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++... ...++++++++|||||.|++...
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 33111 25899999999999999998864
No 281
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.75 E-value=2.3e-08 Score=102.62 Aligned_cols=96 Identities=15% Similarity=0.150 Sum_probs=72.5
Q ss_pred CCCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCC--CceEEeecccCCCCCCCCeeEEEecc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLPYPSQAFDLIHCSR 346 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~--~~~~~~~d~e~Lpf~d~sFDlVv~s~ 346 (666)
+..+|||+|||+|.++..++.. +|+++|+++.++..++.+. ...++ ...+...|.... +++++||+|++.
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~- 188 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNL-TKWGLIERVTIKVRDISEG-FDEKDVDALFLD- 188 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHH-HHTTCGGGEEEECCCGGGC-CSCCSEEEEEEC-
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHH-HHcCCCCCEEEEECCHHHc-ccCCccCEEEEC-
Confidence 4579999999999888777642 7999999999888776543 33444 223444455554 566789999963
Q ss_pred cccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 347 CRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 347 ~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
. +++..++.++.++|+|||.+++.+.
T Consensus 189 ----~-~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 189 ----V-PDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp ----C-SCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred ----C-cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 2 5667899999999999999999864
No 282
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.75 E-value=5.1e-09 Score=106.20 Aligned_cols=97 Identities=13% Similarity=0.031 Sum_probs=71.2
Q ss_pred CCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccC-CCCC-----CCCeeE
Q 005981 275 IRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LPYP-----SQAFDL 341 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~-Lpf~-----d~sFDl 341 (666)
..+|||||||+|..+..|+.. +|+++|+++.++..++... ...++. ..+...++.. ++.. +++||+
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYW-REAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHH-HHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 479999999999988888752 8999999999987776443 444543 3344444433 2221 478999
Q ss_pred EEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 342 Vv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
|++... ..+...++.++.++|||||++++..
T Consensus 140 V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 140 IFIDAD----KTNYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp EEEESC----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEcCC----hHHhHHHHHHHHHhcCCCeEEEEEC
Confidence 997543 2445688999999999999999974
No 283
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.75 E-value=1.3e-08 Score=107.23 Aligned_cols=102 Identities=15% Similarity=0.113 Sum_probs=73.9
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHH-cC----CCceEEeecccC-CCCCCCCeeEEE
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALE-RG----APAMVAAFATRR-LPYPSQAFDLIH 343 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~-rg----~~~~~~~~d~e~-Lpf~d~sFDlVv 343 (666)
.+.+|||||||+|.++..+++. +|+++|+++.++..++..+... .+ ....+...|... ++..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 4579999999999999999865 7999999999988777554331 12 223344445433 333467899999
Q ss_pred eccccccc---cc--C--hHHHHHHHHHhccCCeEEEEEE
Q 005981 344 CSRCRINW---TR--D--DGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 344 ~s~~l~h~---~~--d--~~~~L~el~RvLkPGG~lv~st 376 (666)
+... .++ .. . ...+++++.++|||||.+++..
T Consensus 157 ~d~~-~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 157 IDLT-DPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EECC-CCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCC-CcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 8654 444 11 1 2588999999999999999874
No 284
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.74 E-value=1.3e-08 Score=102.32 Aligned_cols=95 Identities=20% Similarity=0.269 Sum_probs=68.8
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc-cccccccCCCCCCCCCccceEEecc-cc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL-IGVMHDWCEPFDTYPRTYDLLHAAG-LF 592 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl-ig~~~~~ce~~~~yp~tyDliha~~-~f 592 (666)
.+|||+|||.|.++..|++.|. +|+.+|. +.+++.+.++ |+ +.+.+...+.++ .+.+||+|.|.. .+
T Consensus 43 ~~vLDlGcG~G~~~~~l~~~~~-----~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~~~ 116 (252)
T 1wzn_A 43 RRVLDLACGTGIPTLELAERGY-----EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-FKNEFDAVTMFFSTI 116 (252)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-CCSCEEEEEECSSGG
T ss_pred CEEEEeCCCCCHHHHHHHHCCC-----eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcc-cCCCccEEEEcCCch
Confidence 5799999999999999999987 5666763 5777777654 43 444444433333 458999999863 33
Q ss_pred ccCCCCCCHHHHHHHhhhcccCCeEEEEE
Q 005981 593 SVESKRCNMSTIMLEMDRMLRPGGHVYIR 621 (666)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRPgG~~ii~ 621 (666)
.+. ..-+...+|.++.|+|||||.+++.
T Consensus 117 ~~~-~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 117 MYF-DEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp GGS-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcC-CHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 333 2234578999999999999999985
No 285
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.74 E-value=1.9e-08 Score=99.64 Aligned_cols=118 Identities=11% Similarity=0.172 Sum_probs=82.0
Q ss_pred eEeeccccchHHHHHHhhC--CCceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCCC-CC-CccceEEec
Q 005981 521 NVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFDT-YP-RTYDLLHAA 589 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~~-yp-~tyDliha~ 589 (666)
.|||+|||.|.++.+|++. +. +|+.+|. +.++..+.++ |+ +.+++...+.++. ++ .+||.|++.
T Consensus 41 ~vLDiGcG~G~~~~~la~~~p~~-----~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 41 IHIEVGTGKGQFISGMAKQNPDI-----NYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp EEEEECCTTSHHHHHHHHHCTTS-----EEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred eEEEEecCCCHHHHHHHHHCCCC-----CEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 4999999999999999887 44 7778874 5777766654 55 4555444443332 33 899999875
Q ss_pred cccc-----cCCCCCCHHHHHHHhhhcccCCeEEEEE-eChhHHHHHHHHHHhcCcEEEE
Q 005981 590 GLFS-----VESKRCNMSTIMLEMDRMLRPGGHVYIR-DSIDVMDELQEIGKAMGWHVTL 643 (666)
Q Consensus 590 ~~f~-----~~~~~c~~~~~l~E~dRiLRPgG~~ii~-d~~~~~~~~~~i~~~l~W~~~~ 643 (666)
..-. |...+-....+|.++.|+|||||.++|. |..+..+.+.+++....|+...
T Consensus 116 ~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~~ 175 (213)
T 2fca_A 116 FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLTY 175 (213)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCcccc
Confidence 2111 1122222468999999999999999996 6666677777777777786543
No 286
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.73 E-value=2e-08 Score=105.65 Aligned_cols=99 Identities=20% Similarity=0.176 Sum_probs=65.0
Q ss_pred CCCeEEEECCCCchhHHHhccC-CeEEEeC----CcchHHHHHHHHHHHcCCC-ceEEee-cccCCCCCCCCeeEEEecc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR-NVITMSI----APKDVHENQIQFALERGAP-AMVAAF-ATRRLPYPSQAFDLIHCSR 346 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-~V~gvDi----S~~~l~~a~~~~a~~rg~~-~~~~~~-d~e~Lpf~d~sFDlVv~s~ 346 (666)
++.+|||||||+|.++..++++ +|+|+|+ ++.++.... ....+.+ ..+... |+..+ +.++||+|+|..
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~D~~~l--~~~~fD~V~sd~ 156 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIP---MSTYGWNLVRLQSGVDVFFI--PPERCDTLLCDI 156 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCC---CCSTTGGGEEEECSCCTTTS--CCCCCSEEEECC
T ss_pred CCCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHH---hhhcCCCCeEEEeccccccC--CcCCCCEEEECC
Confidence 4579999999999999999887 8999999 443331100 0111112 233333 44444 457899999865
Q ss_pred ccc--ccccChH---HHHHHHHHhccCCeEEEEEEC
Q 005981 347 CRI--NWTRDDG---ILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 347 ~l~--h~~~d~~---~~L~el~RvLkPGG~lv~st~ 377 (666)
+.. ++..+.. .+|.++.++|||||.|++..+
T Consensus 157 ~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 157 GESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred ccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 532 2222222 478889999999999999764
No 287
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.73 E-value=6.9e-08 Score=105.02 Aligned_cols=109 Identities=14% Similarity=0.014 Sum_probs=75.8
Q ss_pred CCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCC-CCCCCCeeEEEeccccccc
Q 005981 275 IRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRL-PYPSQAFDLIHCSRCRINW 351 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~L-pf~d~sFDlVv~s~~l~h~ 351 (666)
+.+|||+|||+|.++..++.. .|+++|+|+.++..++.+ +...++...+...|+..+ +...+.||+|++....+..
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n-~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~ 293 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQA-ALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVK 293 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCS
T ss_pred CCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHH-HHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCC
Confidence 579999999999999988765 799999999999888754 444566544445554332 2213449999986443221
Q ss_pred --------ccChHHHHHHHHHhccCCeEEEEEECCCCCCHH
Q 005981 352 --------TRDDGILLLEVNRMLRAGGYFAWAAQPVYKHEE 384 (666)
Q Consensus 352 --------~~d~~~~L~el~RvLkPGG~lv~st~P~~~~~~ 384 (666)
..+...++.++.++|+|||.+++.+........
T Consensus 294 ~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~ 334 (393)
T 4dmg_A 294 RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLE 334 (393)
T ss_dssp SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHH
Confidence 122347888999999999999977643333333
No 288
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.73 E-value=1.1e-08 Score=103.09 Aligned_cols=141 Identities=13% Similarity=0.117 Sum_probs=93.7
Q ss_pred ceeeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhccc-------------------------------
Q 005981 518 KLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRGL------------------------------- 565 (666)
Q Consensus 518 ~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erGl------------------------------- 565 (666)
.-.+|||+|||.|.++..|++.+. .+|+.+|. +.+++.+.++--
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~----~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF----TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE----EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc----CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 346799999999999999998863 35677763 567777654410
Q ss_pred ----c-ccccccCCCCCC-CC---CccceEEeccccccCC-CCCCHHHHHHHhhhcccCCeEEEEEeChh----------
Q 005981 566 ----I-GVMHDWCEPFDT-YP---RTYDLLHAAGLFSVES-KRCNMSTIMLEMDRMLRPGGHVYIRDSID---------- 625 (666)
Q Consensus 566 ----i-g~~~~~ce~~~~-yp---~tyDliha~~~f~~~~-~~c~~~~~l~E~dRiLRPgG~~ii~d~~~---------- 625 (666)
+ .+.+...+.... -+ .+||+|.|..++.+.. +.-+...+|.++.|+|||||++++.+...
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~ 211 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQK 211 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEE
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcc
Confidence 3 333322222222 23 7999999998877432 11245689999999999999999976221
Q ss_pred ------HHHHHHHHHHhcCcEEEEEeccCC---C----CCceEEEEEEeC
Q 005981 626 ------VMDELQEIGKAMGWHVTLRETAEG---P----HASYRILTADKR 662 (666)
Q Consensus 626 ------~~~~~~~i~~~l~W~~~~~~~~~~---~----~~~e~~l~~~k~ 662 (666)
..+.+.+++....+++........ . ....-+++|+|.
T Consensus 212 ~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~ 261 (265)
T 2i62_A 212 FSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKP 261 (265)
T ss_dssp EECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECC
T ss_pred ccccccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEeccc
Confidence 245888999999998765433211 0 123456788874
No 289
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.72 E-value=7.1e-08 Score=91.09 Aligned_cols=114 Identities=14% Similarity=0.195 Sum_probs=84.5
Q ss_pred cccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc--ccccc-ccCCCCCCCC-Cc
Q 005981 512 LHWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMH-DWCEPFDTYP-RT 582 (666)
Q Consensus 512 l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~-~~ce~~~~yp-~t 582 (666)
+....+ .+|||+|||.|.++.+|++.+. +|+.+|. +.+++.+.++ |+ +.+.+ |+.+ .+| .+
T Consensus 31 ~~~~~~--~~vLdiG~G~G~~~~~l~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~---~~~~~~ 100 (183)
T 2yxd_A 31 LNLNKD--DVVVDVGCGSGGMTVEIAKRCK-----FVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED---VLDKLE 100 (183)
T ss_dssp HCCCTT--CEEEEESCCCSHHHHHHHTTSS-----EEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH---HGGGCC
T ss_pred cCCCCC--CEEEEeCCCCCHHHHHHHhcCC-----eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc---cccCCC
Confidence 444433 3699999999999999998655 5666663 5667666655 43 33333 3322 234 69
Q ss_pred cceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe-ChhHHHHHHHHHHhcCcEEEEE
Q 005981 583 YDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD-SIDVMDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 583 yDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d-~~~~~~~~~~i~~~l~W~~~~~ 644 (666)
||+|.+..+ ..+..++.++.|+ |||.+++.+ ..+...++.+.++...|++...
T Consensus 101 ~D~i~~~~~-------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 101 FNKAFIGGT-------KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp CSEEEECSC-------SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEECCc-------ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEE
Confidence 999999866 4668999999999 999999987 5667888999999999988765
No 290
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.72 E-value=6e-08 Score=97.92 Aligned_cols=131 Identities=15% Similarity=0.180 Sum_probs=86.2
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhccc-ccc-----ccccC-CCCCCCCCccceEEeccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRGL-IGV-----MHDWC-EPFDTYPRTYDLLHAAGL 591 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erGl-ig~-----~~~~c-e~~~~yp~tyDliha~~~ 591 (666)
..|||+|||+|+|+.+|+++|+. .|+.+| +++|+..+..+.- +.. ....+ +.+.. .-||.+.++.+
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~----~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~D~v 112 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAK----LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--GRPSFTSIDVS 112 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCS----EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--CCCSEEEECCS
T ss_pred CEEEEEccCCCHHHHHHHhcCCC----EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--CCCCEEEEEEE
Confidence 35999999999999999999741 677777 4788888766432 111 11111 22322 12455555555
Q ss_pred cccCCCCCCHHHHHHHhhhcccCCeEEEEEe-------------------Ch---hHHHHHHHHHHhcCcEEEEEeccC-
Q 005981 592 FSVESKRCNMSTIMLEMDRMLRPGGHVYIRD-------------------SI---DVMDELQEIGKAMGWHVTLRETAE- 648 (666)
Q Consensus 592 f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d-------------------~~---~~~~~~~~i~~~l~W~~~~~~~~~- 648 (666)
|... ..+|.|+.|+|||||++++.- .. ...+++.++++...|++...+...
T Consensus 113 ~~~l------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi 186 (232)
T 3opn_A 113 FISL------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPI 186 (232)
T ss_dssp SSCG------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSS
T ss_pred hhhH------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccC
Confidence 5433 689999999999999999861 11 135678888999999986654322
Q ss_pred -CC-CCceEEEEEEeC
Q 005981 649 -GP-HASYRILTADKR 662 (666)
Q Consensus 649 -~~-~~~e~~l~~~k~ 662 (666)
++ ..-|.++.++|.
T Consensus 187 ~g~~gn~e~l~~~~~~ 202 (232)
T 3opn_A 187 KGGAGNVEFLVHLLKD 202 (232)
T ss_dssp CBTTTBCCEEEEEEES
T ss_pred CCCCCCHHHHHHHhhc
Confidence 22 345778888773
No 291
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.72 E-value=3e-08 Score=101.03 Aligned_cols=156 Identities=13% Similarity=0.088 Sum_probs=101.8
Q ss_pred hHhHHHHHHHHHHhccc-CCCceeeEeeccccchHHHHHHhhC--CCceEEEEeeccCC-CCChhHHHhc----cc--cc
Q 005981 498 SKYWNEIIESYVRALHW-KKMKLRNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIYDR----GL--IG 567 (666)
Q Consensus 498 ~~~w~~~v~~Y~~~l~~-~~~~iRnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig 567 (666)
.+.|.+++-.-...+.. ....-.+|||+|||.|..+..|+.. +. .|+.+|. +.++.++.++ |+ +.
T Consensus 59 ~~~~~~~~~ds~~~l~~~~~~~~~~vLDiG~G~G~~~i~la~~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~l~~v~ 133 (249)
T 3g89_A 59 EEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPGLPLKIVRPEL-----ELVLVDATRKKVAFVERAIEVLGLKGAR 133 (249)
T ss_dssp HHHHHHHHHHHHGGGGSSCCCSSCEEEEETCTTTTTHHHHHHHCTTC-----EEEEEESCHHHHHHHHHHHHHHTCSSEE
T ss_pred HHHhhceeeechhhhcccccCCCCEEEEEcCCCCHHHHHHHHHCCCC-----EEEEEECCHHHHHHHHHHHHHhCCCceE
Confidence 34565555333232221 1122356999999999999888865 33 5666663 5666665543 65 66
Q ss_pred cccccCCCCCC---CCCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe---ChhHHHHHHHHHHhcCcEE
Q 005981 568 VMHDWCEPFDT---YPRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD---SIDVMDELQEIGKAMGWHV 641 (666)
Q Consensus 568 ~~~~~ce~~~~---yp~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d---~~~~~~~~~~i~~~l~W~~ 641 (666)
+++...|.+.. +..+||+|.|..+ .++..++.++.|+|||||++++-. ..+.+..++..++.+.|+.
T Consensus 134 ~~~~d~~~~~~~~~~~~~fD~I~s~a~-------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~ 206 (249)
T 3g89_A 134 ALWGRAEVLAREAGHREAYARAVARAV-------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRL 206 (249)
T ss_dssp EEECCHHHHTTSTTTTTCEEEEEEESS-------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEE
T ss_pred EEECcHHHhhcccccCCCceEEEECCc-------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeE
Confidence 67766666543 3489999998742 356899999999999999999864 4566777888888999987
Q ss_pred EEEeccCCC--CCceEEEEEEeCCCC
Q 005981 642 TLRETAEGP--HASYRILTADKRLLH 665 (666)
Q Consensus 642 ~~~~~~~~~--~~~e~~l~~~k~~~~ 665 (666)
.....-.-+ .....+++.+|.=.+
T Consensus 207 ~~~~~~~~p~~~~~R~l~~~~k~~~t 232 (249)
T 3g89_A 207 GEVLALQLPLSGEARHLVVLEKTAPT 232 (249)
T ss_dssp EEEEEEECTTTCCEEEEEEEEECSCC
T ss_pred EEEEEeeCCCCCCcEEEEEEEeCCCC
Confidence 543211112 234456667775443
No 292
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.72 E-value=4.8e-08 Score=105.85 Aligned_cols=107 Identities=9% Similarity=0.026 Sum_probs=75.0
Q ss_pred CCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC---ceEEeecccC-CCC---CCCCeeEEEe
Q 005981 275 IRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP---AMVAAFATRR-LPY---PSQAFDLIHC 344 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~---~~~~~~d~e~-Lpf---~d~sFDlVv~ 344 (666)
+.+|||+|||+|.++..++.. +|+++|+++.++..++. .++..++. ..+...|+.. ++. ...+||+|++
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~-N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLA-HFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHH-HHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 478999999999999998874 79999999999988875 44455653 3445555433 221 2458999998
Q ss_pred ccccc----ccccC----hHHHHHHHHHhccCCeEEEEEECCCCCC
Q 005981 345 SRCRI----NWTRD----DGILLLEVNRMLRAGGYFAWAAQPVYKH 382 (666)
Q Consensus 345 s~~l~----h~~~d----~~~~L~el~RvLkPGG~lv~st~P~~~~ 382 (666)
..... ....+ ...++.++.++|+|||.+++++.+....
T Consensus 292 DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~ 337 (385)
T 2b78_A 292 DPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMT 337 (385)
T ss_dssp CCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC
T ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC
Confidence 54332 11122 2357788899999999999997544333
No 293
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.71 E-value=1.4e-08 Score=105.20 Aligned_cols=99 Identities=11% Similarity=0.174 Sum_probs=67.6
Q ss_pred eeeEeeccccchHHHH----HHhhCCCceEEEEeeccC-CCCChhHHHhc-----cc--ccc--ccccCCCCC-----CC
Q 005981 519 LRNVLDMRAGFGGFAA----ALIEQKFDCWVMNVVPVS-GFNTLPVIYDR-----GL--IGV--MHDWCEPFD-----TY 579 (666)
Q Consensus 519 iRnvlD~g~G~Ggfaa----~L~~~~~~vwvmnv~~~~-~~~~l~~~~er-----Gl--ig~--~~~~ce~~~-----~y 579 (666)
-..|||+|||+|.++. .|+.++..+ ...++.+| ++.|++.+.++ |+ +.+ .+.-.|.+. .+
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~-~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGV-CINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTC-EEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCc-eeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 3479999999998665 344432122 22447777 46889888776 33 111 121222222 13
Q ss_pred -CCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEE
Q 005981 580 -PRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIR 621 (666)
Q Consensus 580 -p~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~ 621 (666)
+.+||+|+|..++.+..+ ...+|.||.|+|||||+++|.
T Consensus 132 ~~~~fD~V~~~~~l~~~~d---~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVKD---IPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp CCCCEEEEEEESCGGGCSC---HHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCceeEEEEeeeeeecCC---HHHHHHHHHHHcCCCcEEEEE
Confidence 389999999999988765 479999999999999999996
No 294
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.71 E-value=2.2e-08 Score=103.26 Aligned_cols=103 Identities=11% Similarity=0.063 Sum_probs=74.2
Q ss_pred CCCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCCC----CCCCeeEEE
Q 005981 274 HIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPY----PSQAFDLIH 343 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lpf----~d~sFDlVv 343 (666)
++.+|||+|||+|..+..+++ .+|+++|+++.++..++. .+...++. ..+...|...++. ..++||+|+
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~-~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl 161 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKS-NINRMGVLNTIIINADMRKYKDYLLKNEIFFDKIL 161 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHH-HHHHhCCCcEEEEeCChHhcchhhhhccccCCEEE
Confidence 457999999999999888774 379999999998887764 34445553 3444455555543 257899999
Q ss_pred ecccccc-----------------cccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 344 CSRCRIN-----------------WTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 344 ~s~~l~h-----------------~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+...... .......+|.++.++|||||.+++++.
T Consensus 162 ~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 162 LDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp EEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 7522111 113446899999999999999999975
No 295
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.71 E-value=3.9e-08 Score=95.57 Aligned_cols=91 Identities=12% Similarity=0.069 Sum_probs=63.8
Q ss_pred CCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h 350 (666)
...+|||+|||+|.++..++.. +|+|+|+++.++..++.+.. ...+...|+..++ ++||+|+++..+++
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~---~~~D~v~~~~p~~~ 122 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS---GKYDTWIMNPPFGS 122 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC---CCEEEEEECCCC--
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC---CCeeEEEECCCchh
Confidence 4579999999999999888765 69999999988866653322 3345555666664 68999999887666
Q ss_pred cccC-hHHHHHHHHHhccCCeEEEE
Q 005981 351 WTRD-DGILLLEVNRMLRAGGYFAW 374 (666)
Q Consensus 351 ~~~d-~~~~L~el~RvLkPGG~lv~ 374 (666)
+... ...+++++.++| |+.+++
T Consensus 123 ~~~~~~~~~l~~~~~~~--g~~~~~ 145 (200)
T 1ne2_A 123 VVKHSDRAFIDKAFETS--MWIYSI 145 (200)
T ss_dssp -----CHHHHHHHHHHE--EEEEEE
T ss_pred ccCchhHHHHHHHHHhc--CcEEEE
Confidence 6332 247899999998 554433
No 296
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.71 E-value=1.7e-08 Score=100.28 Aligned_cols=96 Identities=18% Similarity=0.238 Sum_probs=73.4
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhccc---cccccccCCCCCCCCCccceEEeccccccC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRGL---IGVMHDWCEPFDTYPRTYDLLHAAGLFSVE 595 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erGl---ig~~~~~ce~~~~yp~tyDliha~~~f~~~ 595 (666)
.+|||+|||.|.++.+|++.|.. +|+.+|. +.+++.+.++.- +.+.+...+.++.-+.+||+|.+..++.+.
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 120 (243)
T 3bkw_A 45 LRIVDLGCGFGWFCRWAHEHGAS----YVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYV 120 (243)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS----EEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred CEEEEEcCcCCHHHHHHHHCCCC----eEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEecccccc
Confidence 46999999999999999998751 4555553 577888877753 344444444444224899999999988877
Q ss_pred CCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 596 SKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 596 ~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
. +...+|.++.|+|||||++++.+
T Consensus 121 ~---~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 121 E---DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp S---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c---hHHHHHHHHHHhcCcCcEEEEEe
Confidence 5 45799999999999999999974
No 297
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.71 E-value=9.6e-09 Score=103.82 Aligned_cols=101 Identities=11% Similarity=0.159 Sum_probs=66.7
Q ss_pred CCCeEEEECCCCchhHHHhcc----CCeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCC---CCC---CCCeeE
Q 005981 274 HIRVVMDAGCGVASFGAYLLP----RNVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRL---PYP---SQAFDL 341 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~----~~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~L---pf~---d~sFDl 341 (666)
...+|||+|||+|.++..++. .+|+|+|+++.++..++.+. ...++. ..+...|+... +++ +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNV-EQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH-HHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 457899999999988877764 38999999999998887544 445554 34444454431 344 268999
Q ss_pred EEeccccccccc--------------ChHHHHHHHHHhccCCeEEEEE
Q 005981 342 IHCSRCRINWTR--------------DDGILLLEVNRMLRAGGYFAWA 375 (666)
Q Consensus 342 Vv~s~~l~h~~~--------------d~~~~L~el~RvLkPGG~lv~s 375 (666)
|+|+..+++... ....++.++.|+|||||.+.+.
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 998865443320 1124577899999999998665
No 298
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.71 E-value=1e-08 Score=99.54 Aligned_cols=138 Identities=14% Similarity=0.118 Sum_probs=80.2
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc-cccc-cccCCCCCC---CCCccceEEec
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL-IGVM-HDWCEPFDT---YPRTYDLLHAA 589 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl-ig~~-~~~ce~~~~---yp~tyDliha~ 589 (666)
..|||+|||.|.++.+|++.+-. .+|+.+|. +.+++.+.++ |+ +.+. .|..+.+.. ...+||+|.++
T Consensus 32 ~~vLDiG~G~G~~~~~l~~~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 32 TRVIDVGTGSGCIAVSIALACPG---VSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp EEEEEEESSBCHHHHHHHHHCTT---EEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CEEEEecCCHhHHHHHHHHhCCC---CeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 46999999999999999998311 25555653 4556555443 32 2233 333332221 12799999996
Q ss_pred cccccCCCC-------------CC----------HHHHHHHhhhcccCCeE-EEEEeChhHHHHHHHHHH--hcCcEEEE
Q 005981 590 GLFSVESKR-------------CN----------MSTIMLEMDRMLRPGGH-VYIRDSIDVMDELQEIGK--AMGWHVTL 643 (666)
Q Consensus 590 ~~f~~~~~~-------------c~----------~~~~l~E~dRiLRPgG~-~ii~d~~~~~~~~~~i~~--~l~W~~~~ 643 (666)
--|...... .. +..++.++.|+|||||+ +++.-.......+.+++. .-.|....
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~~ 188 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRVR 188 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEECC
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceEE
Confidence 544321110 00 16889999999999999 777655666778888888 77775432
Q ss_pred EeccCCCCCceEEEEEEeC
Q 005981 644 RETAEGPHASYRILTADKR 662 (666)
Q Consensus 644 ~~~~~~~~~~e~~l~~~k~ 662 (666)
...+ ..+.+++++++|.
T Consensus 189 ~~~~--~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 189 KVKD--LRGIDRVIAVTRE 205 (215)
T ss_dssp EEEC--TTSCEEEEEEEEC
T ss_pred EEEe--cCCCEEEEEEEEc
Confidence 2221 2245889998874
No 299
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.70 E-value=7.9e-09 Score=100.50 Aligned_cols=97 Identities=15% Similarity=0.169 Sum_probs=70.5
Q ss_pred eeEeeccccchHH-HHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc-cccccccCCCCCCCCCccceEEecccc
Q 005981 520 RNVLDMRAGFGGF-AAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL-IGVMHDWCEPFDTYPRTYDLLHAAGLF 592 (666)
Q Consensus 520 RnvlD~g~G~Ggf-aa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl-ig~~~~~ce~~~~yp~tyDliha~~~f 592 (666)
.+|||+|||.|.+ ...++..|. +|+.+|. +.+++.+.++ |. +.+.+...+.++.-+.+||+|.|.+++
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDGY-----KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTTC-----EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred CEEEEECCCCCHHHHHHHHhCCC-----EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChH
Confidence 4699999999998 556666676 5666663 5677766654 32 444544444444223899999999888
Q ss_pred ccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 593 SVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
.+.. .-+...+|.++.|+|||||++++.+
T Consensus 100 ~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 100 FHMR-KNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp GGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhCC-HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 7763 2346799999999999999999974
No 300
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.70 E-value=2.3e-08 Score=101.93 Aligned_cols=125 Identities=19% Similarity=0.197 Sum_probs=89.7
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc-cccccccCCCCCCC-CCccceEEecccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL-IGVMHDWCEPFDTY-PRTYDLLHAAGLF 592 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl-ig~~~~~ce~~~~y-p~tyDliha~~~f 592 (666)
.+|||+|||.|.++.++++.|. +|+.+|. +.+++.+.++ |+ +.+.+.-.+. .+ +.+||+|.++.++
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~-----~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~--~~~~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGG-----KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA--ALPFGPFDLLVANLYA 194 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH--HGGGCCEEEEEEECCH
T ss_pred CEEEEecCCCcHHHHHHHHhCC-----eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh--cCcCCCCCEEEECCcH
Confidence 3699999999999999999976 5666663 5677766664 44 4444322211 13 3789999997543
Q ss_pred ccCCCCCCHHHHHHHhhhcccCCeEEEEEeC-hhHHHHHHHHHHhcCcEEEEEeccCCCCCceEEEEEEe
Q 005981 593 SVESKRCNMSTIMLEMDRMLRPGGHVYIRDS-IDVMDELQEIGKAMGWHVTLRETAEGPHASYRILTADK 661 (666)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~-~~~~~~~~~i~~~l~W~~~~~~~~~~~~~~e~~l~~~k 661 (666)
.. +..++.++.|+|||||++++++. ....+.+.+++++..+++.....++ ....|+++|
T Consensus 195 ~~------~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~~~~~----~W~~l~~~k 254 (254)
T 2nxc_A 195 EL------HAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAEG----EWVLLAYGR 254 (254)
T ss_dssp HH------HHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEEEET----TEEEEEEEC
T ss_pred HH------HHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEEeccC----CeEEEEEEC
Confidence 22 46899999999999999999864 4467888999999999986654433 356666665
No 301
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.70 E-value=2.9e-08 Score=102.92 Aligned_cols=101 Identities=15% Similarity=0.063 Sum_probs=70.2
Q ss_pred CCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHH-----------cCCCceEEeecccC-CCCCCCC
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALE-----------RGAPAMVAAFATRR-LPYPSQA 338 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~-----------rg~~~~~~~~d~e~-Lpf~d~s 338 (666)
.+.+|||||||+|.++..+++. +|+++|+++.++..++..+ .. ......+...|... ++. +++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 4579999999999999998865 8999999999887776544 11 11122334444322 222 578
Q ss_pred eeEEEeccccccccc--C--hHHHHHHHHHhccCCeEEEEEEC
Q 005981 339 FDLIHCSRCRINWTR--D--DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 339 FDlVv~s~~l~h~~~--d--~~~~L~el~RvLkPGG~lv~st~ 377 (666)
||+|++... .++.. . ...+++++.++|+|||.+++...
T Consensus 153 fD~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 153 FDVIIADST-DPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp EEEEEEECC-CCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEEECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 999997544 33321 1 25789999999999999999753
No 302
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.70 E-value=1e-08 Score=105.64 Aligned_cols=106 Identities=11% Similarity=-0.018 Sum_probs=76.1
Q ss_pred HHHHhcccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhccccc-cccccCCCCC-----CC
Q 005981 507 SYVRALHWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRGLIG-VMHDWCEPFD-----TY 579 (666)
Q Consensus 507 ~Y~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erGlig-~~~~~ce~~~-----~y 579 (666)
.....+++..+ ..|||+|||+|.++..|+++|. .|+.+| ++.+++.+.++---. +..++ +.+. ..
T Consensus 36 ~il~~l~l~~g--~~VLDlGcGtG~~a~~La~~g~-----~V~gvD~S~~ml~~Ar~~~~~~~v~~~~-~~~~~~~~~~~ 107 (261)
T 3iv6_A 36 NDIFLENIVPG--STVAVIGASTRFLIEKALERGA-----SVTVFDFSQRMCDDLAEALADRCVTIDL-LDITAEIPKEL 107 (261)
T ss_dssp HHHHTTTCCTT--CEEEEECTTCHHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHTSSSCCEEEE-CCTTSCCCGGG
T ss_pred HHHHhcCCCCc--CEEEEEeCcchHHHHHHHhcCC-----EEEEEECCHHHHHHHHHHHHhccceeee-eeccccccccc
Confidence 33444555544 3699999999999999999987 566677 468999888764211 22222 2222 12
Q ss_pred CCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 580 PRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 580 p~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
+.+||+|.|+.++.+... -+...+|.+|.|+| |||.++++-
T Consensus 108 ~~~fD~Vv~~~~l~~~~~-~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 108 AGHFDFVLNDRLINRFTT-EEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp TTCCSEEEEESCGGGSCH-HHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred CCCccEEEEhhhhHhCCH-HHHHHHHHHHHHhC-cCcEEEEEe
Confidence 479999999988887643 24568999999999 999999983
No 303
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.69 E-value=1.4e-08 Score=109.69 Aligned_cols=114 Identities=20% Similarity=0.327 Sum_probs=86.1
Q ss_pred eeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc---------c-----ccccccccCCCCC----
Q 005981 520 RNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR---------G-----LIGVMHDWCEPFD---- 577 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er---------G-----lig~~~~~ce~~~---- 577 (666)
..|||+|||.|.++..|++. +. .|+.+|. +.+++.+.++ | -+.+.+...+.+.
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~~-----~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~ 159 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEHG-----KVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEP 159 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTTC-----EEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBS
T ss_pred CEEEEecCccCHHHHHHHHHhCCCC-----EEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhccc
Confidence 46999999999999999875 33 5666663 6788888776 5 2445555544441
Q ss_pred -CCC-CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh-----------------------hHHHHHHH
Q 005981 578 -TYP-RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI-----------------------DVMDELQE 632 (666)
Q Consensus 578 -~yp-~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~-----------------------~~~~~~~~ 632 (666)
.+| .+||+|++..++.+..+ ...+|.|+.|+|||||++++.|.. -..+.+.+
T Consensus 160 ~~~~~~~fD~V~~~~~l~~~~d---~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNLSTN---KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRR 236 (383)
T ss_dssp CCCCTTCEEEEEEESCGGGCSC---HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHH
T ss_pred CCCCCCCEEEEEEccchhcCCC---HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHH
Confidence 344 89999999999988765 479999999999999999997521 11377888
Q ss_pred HHHhcCcEE
Q 005981 633 IGKAMGWHV 641 (666)
Q Consensus 633 i~~~l~W~~ 641 (666)
++++-.++.
T Consensus 237 ll~~aGF~~ 245 (383)
T 4fsd_A 237 LVAEAGFRD 245 (383)
T ss_dssp HHHHTTCCC
T ss_pred HHHHCCCce
Confidence 899888864
No 304
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.69 E-value=7.2e-09 Score=108.73 Aligned_cols=100 Identities=13% Similarity=0.177 Sum_probs=69.0
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhccc-cc-----------cccccC------CCCC-CC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRGL-IG-----------VMHDWC------EPFD-TY 579 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erGl-ig-----------~~~~~c------e~~~-~y 579 (666)
..|||+|||.|+....++..+. -+|+.+| ++.+++.|.+|-- .+ .....+ |.+. .+
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~----~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEI----ALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTC----SEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CeEEEEecCCcHhHHHHHhcCC----CeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 4699999999987766665542 1678888 4789988887621 11 112222 2221 23
Q ss_pred C-CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC
Q 005981 580 P-RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS 623 (666)
Q Consensus 580 p-~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~ 623 (666)
| .+||+|-|..++.+.-+.-+...+|.|+.|+|||||+|+++..
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 4 8999999987765432222567999999999999999999854
No 305
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.69 E-value=2.6e-08 Score=101.26 Aligned_cols=97 Identities=10% Similarity=0.072 Sum_probs=70.5
Q ss_pred CCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccC-CC-C-----CCCCee
Q 005981 275 IRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRR-LP-Y-----PSQAFD 340 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~-Lp-f-----~d~sFD 340 (666)
..+|||||||+|..+..++. .+|+++|+++.++..++..+ ...++. ..+...+... ++ + ++++||
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~-~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVI-KKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHH-HHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 46899999999988877764 38999999999988777544 344543 2333344322 23 1 157899
Q ss_pred EEEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 341 LIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 341 lVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
+|++... ..+...++.++.++|||||++++..
T Consensus 159 ~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 159 FIFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEEECSC----STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEcCc----hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 9997532 2456789999999999999999874
No 306
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.68 E-value=4.4e-08 Score=95.61 Aligned_cols=93 Identities=23% Similarity=0.351 Sum_probs=70.6
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhcc-ccccccccCCCCCCCCCccceEEeccccccCCC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRG-LIGVMHDWCEPFDTYPRTYDLLHAAGLFSVESK 597 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erG-lig~~~~~ce~~~~yp~tyDliha~~~f~~~~~ 597 (666)
.+|||+|||.|.++..| ++. +|+.+|. +.+++.+.++. -+.+.+...+.++.-+++||+|.+.+++.+..
T Consensus 38 ~~vLdiG~G~G~~~~~l---~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~- 109 (211)
T 2gs9_A 38 ESLLEVGAGTGYWLRRL---PYP----QKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVE- 109 (211)
T ss_dssp SEEEEETCTTCHHHHHC---CCS----EEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCS-
T ss_pred CeEEEECCCCCHhHHhC---CCC----eEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcC-
Confidence 47999999999999998 431 4566663 57888887773 24444444444442237999999999888875
Q ss_pred CCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 598 RCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 598 ~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
+...+|.|+.|+|||||.+++.+
T Consensus 110 --~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 110 --DVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CHHHHHHHHHHHcCCCCEEEEEe
Confidence 45799999999999999999985
No 307
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.68 E-value=6.8e-08 Score=95.11 Aligned_cols=117 Identities=12% Similarity=0.134 Sum_probs=83.9
Q ss_pred hcccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCC-CCCCCC
Q 005981 511 ALHWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEP-FDTYPR 581 (666)
Q Consensus 511 ~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~-~~~yp~ 581 (666)
.+.+..+ ..|||+|||.|.++.+|++.+. .|+.+|. +.+++.+.++ |+ +.+.+...+. +.. ..
T Consensus 50 ~l~~~~~--~~vLDlGcG~G~~~~~la~~~~-----~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~-~~ 121 (204)
T 3njr_A 50 ALAPRRG--ELLWDIGGGSGSVSVEWCLAGG-----RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD-LP 121 (204)
T ss_dssp HHCCCTT--CEEEEETCTTCHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT-SC
T ss_pred hcCCCCC--CEEEEecCCCCHHHHHHHHcCC-----EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc-CC
Confidence 3445444 4599999999999999999876 5566663 5677766654 44 4444444333 222 25
Q ss_pred ccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe-ChhHHHHHHHHHHhcCcEEEE
Q 005981 582 TYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD-SIDVMDELQEIGKAMGWHVTL 643 (666)
Q Consensus 582 tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d-~~~~~~~~~~i~~~l~W~~~~ 643 (666)
.||+|.+...+ +.+ ++.++.|+|||||.+++.. ..+...++.++++...+++..
T Consensus 122 ~~D~v~~~~~~-------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 122 LPEAVFIGGGG-------SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLLR 176 (204)
T ss_dssp CCSEEEECSCC-------CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEEE
T ss_pred CCCEEEECCcc-------cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEEE
Confidence 79999987522 456 9999999999999999985 466788888888888887654
No 308
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.68 E-value=2.5e-08 Score=98.02 Aligned_cols=99 Identities=19% Similarity=0.259 Sum_probs=71.0
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhcc-----ccccccccCCCCCCCCCccceEEeccccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRG-----LIGVMHDWCEPFDTYPRTYDLLHAAGLFS 593 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erG-----lig~~~~~ce~~~~yp~tyDliha~~~f~ 593 (666)
.+|||+|||.|.++..|++.+. +|+.+|. +.+++.+.++. -+.+.+.-.+.++.-+.+||+|.+..++.
T Consensus 40 ~~vLDlG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 40 GKVLDLACGVGGFSFLLEDYGF-----EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIV 114 (227)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGG
T ss_pred CeEEEEeccCCHHHHHHHHcCC-----EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchH
Confidence 4699999999999999999975 5666663 56777766652 24444443333332237999999998744
Q ss_pred cCCCCCCHHHHHHHhhhcccCCeEEEEEeCh
Q 005981 594 VESKRCNMSTIMLEMDRMLRPGGHVYIRDSI 624 (666)
Q Consensus 594 ~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~ 624 (666)
+.. .-+...+|.++.|+|||||.+++.+..
T Consensus 115 ~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 115 HFE-PLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp GCC-HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hCC-HHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 332 123468999999999999999998653
No 309
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.68 E-value=3.3e-08 Score=99.17 Aligned_cols=97 Identities=15% Similarity=0.153 Sum_probs=70.8
Q ss_pred CCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecc----cCCCCCC--CCeeE
Q 005981 275 IRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFAT----RRLPYPS--QAFDL 341 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~----e~Lpf~d--~sFDl 341 (666)
..+|||||||+|..+..++.. +|+++|+++.++..++..+. ..+.. ..+...+. ..++..+ ++||+
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~-~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQ-KAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH-HHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 368999999999998888754 79999999998887765443 33443 23333332 2233333 78999
Q ss_pred EEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 342 Vv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
|++... ..+...++.++.++|||||++++..
T Consensus 152 V~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 152 IFIDAD----KRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEECSC----GGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred EEECCC----HHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 997543 2445789999999999999999974
No 310
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.68 E-value=3.9e-08 Score=105.36 Aligned_cols=137 Identities=16% Similarity=0.218 Sum_probs=93.1
Q ss_pred ceeeEeeccccchHHHHHHhhC--CCceEEEEeeccCCCCChhHHHhc----cc---cccc-cccCCCCCCCCCccceEE
Q 005981 518 KLRNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSGFNTLPVIYDR----GL---IGVM-HDWCEPFDTYPRTYDLLH 587 (666)
Q Consensus 518 ~iRnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~~~~l~~~~er----Gl---ig~~-~~~ce~~~~yp~tyDlih 587 (666)
..+.|||+|||.|.++.+|+++ +. .++.+|.+.+++.+.++ |+ +.+. +|..+.-.++|.+||+|+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~-----~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~ 253 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEV-----EVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVW 253 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTC-----EEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCC-----EEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEE
Confidence 4578999999999999999885 33 34444545667666654 43 4444 333221113678999999
Q ss_pred eccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeChh------------------------------HHHHHHHHHHhc
Q 005981 588 AAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSID------------------------------VMDELQEIGKAM 637 (666)
Q Consensus 588 a~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~------------------------------~~~~~~~i~~~l 637 (666)
+..++.++.+. +...+|.++.|+|||||+++|.|..- ..++++++++.-
T Consensus 254 ~~~vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~A 332 (363)
T 3dp7_A 254 MSQFLDCFSEE-EVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENA 332 (363)
T ss_dssp EESCSTTSCHH-HHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTT
T ss_pred EechhhhCCHH-HHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHc
Confidence 99988877643 33588999999999999999975210 245677778888
Q ss_pred CcEEEEEeccCCCCCceEEEEEEeC
Q 005981 638 GWHVTLRETAEGPHASYRILTADKR 662 (666)
Q Consensus 638 ~W~~~~~~~~~~~~~~e~~l~~~k~ 662 (666)
.++........+ ....++.+.|.
T Consensus 333 Gf~~v~~~~~~g--~~~svi~~~~~ 355 (363)
T 3dp7_A 333 GLEVEEIQDNIG--LGHSILQCRLK 355 (363)
T ss_dssp TEEESCCCCCBT--TTBEEEEEEEC
T ss_pred CCeEEEEEeCCC--CCceEEEEeec
Confidence 887654332222 34678877775
No 311
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.67 E-value=4.3e-08 Score=96.54 Aligned_cols=121 Identities=16% Similarity=0.177 Sum_probs=84.0
Q ss_pred eeEeeccccchHHHHHHhhC--CCceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCCC-CC-CccceEEe
Q 005981 520 RNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFDT-YP-RTYDLLHA 588 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~~-yp-~tyDliha 588 (666)
..|||+|||.|.++.+|++. +. +|+.+|. +.++..+.++ |+ +.+++...+.++. ++ .+||+|++
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p~~-----~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNPDI-----NYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTTS-----EEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CeEEEEccCcCHHHHHHHHHCCCC-----CEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 35999999999999999887 34 6667763 5677666553 44 4455544444432 43 79999998
Q ss_pred cccccc-----CCCCCCHHHHHHHhhhcccCCeEEEEE-eChhHHHHHHHHHHhcCcEEEEEe
Q 005981 589 AGLFSV-----ESKRCNMSTIMLEMDRMLRPGGHVYIR-DSIDVMDELQEIGKAMGWHVTLRE 645 (666)
Q Consensus 589 ~~~f~~-----~~~~c~~~~~l~E~dRiLRPgG~~ii~-d~~~~~~~~~~i~~~l~W~~~~~~ 645 (666)
...... ...+-....+|.++.|+|||||.+++. |..+..+.+.++++...|+.....
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 118 NFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred ECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeecc
Confidence 733211 111112368999999999999999996 565667788888888888875543
No 312
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.66 E-value=2.6e-08 Score=99.90 Aligned_cols=97 Identities=9% Similarity=0.140 Sum_probs=69.7
Q ss_pred CCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHcCCCc--eEEeecccC-CC-------------
Q 005981 275 IRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAPA--MVAAFATRR-LP------------- 333 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~rg~~~--~~~~~d~e~-Lp------------- 333 (666)
..+|||||||+|.++..++. .+|+++|+++.++..++.... ..+... .+...+... ++
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWK-ENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHH-HTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 46899999999998887764 389999999998887765443 344432 333333222 11
Q ss_pred -CCC--CCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 334 -YPS--QAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 334 -f~d--~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
|++ ++||+|++... ..+...++.++.++|||||.+++..
T Consensus 140 ~f~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTCCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 333 78999997643 2445688999999999999999975
No 313
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.66 E-value=9.5e-08 Score=98.27 Aligned_cols=94 Identities=17% Similarity=0.113 Sum_probs=67.8
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHH----HcCCCceEEeecccCCCCCCCCeeEEEeccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFAL----ERGAPAMVAAFATRRLPYPSQAFDLIHCSRC 347 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~----~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~ 347 (666)
.+++|||||||+|.++..+++. +|+++|+++.++..++..+.. .......+...|..... ++||+|++..
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~- 147 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ- 147 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS-
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC-
Confidence 4579999999999999888764 899999999887665432211 01112234444544433 7899999752
Q ss_pred ccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 348 RINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 348 l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
.++..+++++.++|||||.+++..
T Consensus 148 -----~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 148 -----EPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp -----CCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred -----CChHHHHHHHHHhcCCCcEEEEEc
Confidence 355668999999999999999974
No 314
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.66 E-value=2.8e-07 Score=99.27 Aligned_cols=100 Identities=13% Similarity=0.022 Sum_probs=74.1
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCC-CceEEeecccC-CCC-CCCCeeEEEecc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGA-PAMVAAFATRR-LPY-PSQAFDLIHCSR 346 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~-~~~~~~~d~e~-Lpf-~d~sFDlVv~s~ 346 (666)
.+.+|||+| |+|.++..++.. +|+++|+++.++..++.+ +...++ ...+...|+.. +|. .+++||+|+++.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~-~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKA-ANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHH-HHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 457999999 999988877643 799999999999887754 444455 34455556666 664 357899999876
Q ss_pred cccccccChHHHHHHHHHhccCCe-EEEEEEC
Q 005981 347 CRINWTRDDGILLLEVNRMLRAGG-YFAWAAQ 377 (666)
Q Consensus 347 ~l~h~~~d~~~~L~el~RvLkPGG-~lv~st~ 377 (666)
.+... . ...++.++.++||||| .++++..
T Consensus 250 p~~~~-~-~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 250 PETLE-A-IRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp CSSHH-H-HHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred CCchH-H-HHHHHHHHHHHcccCCeEEEEEEe
Confidence 53333 2 5789999999999999 4466654
No 315
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.65 E-value=1.7e-08 Score=100.51 Aligned_cols=110 Identities=16% Similarity=0.168 Sum_probs=80.5
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhccc-ccccc-ccCCCCCCC-CCccceEEeccccccC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRGL-IGVMH-DWCEPFDTY-PRTYDLLHAAGLFSVE 595 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erGl-ig~~~-~~ce~~~~y-p~tyDliha~~~f~~~ 595 (666)
..|||+|||.|.++.+|++.+. .|+.+|. +.+++.+.++.- +.+.+ |+.+.++.- +.+||+|.+.
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------ 118 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAA-----RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------ 118 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSS-----EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE------
T ss_pred CeEEEeCCCCCHHHHHHHHcCC-----EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC------
Confidence 3599999999999999999976 5666763 678888888733 44443 443555432 4799999987
Q ss_pred CCCCCHHHHHHHhhhcccCCeEEEEEeChhHHHHHHHHHHhcCcEEEE
Q 005981 596 SKRCNMSTIMLEMDRMLRPGGHVYIRDSIDVMDELQEIGKAMGWHVTL 643 (666)
Q Consensus 596 ~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~~~~~~~~i~~~l~W~~~~ 643 (666)
-+...+|.++.|+|||||.++..........+.+.+....++...
T Consensus 119 ---~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~~~ 163 (226)
T 3m33_A 119 ---RGPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGWDIVA 163 (226)
T ss_dssp ---SCCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTCEEEE
T ss_pred ---CCHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCeEEE
Confidence 134588999999999999999544434455677777777766543
No 316
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.65 E-value=1.2e-07 Score=99.90 Aligned_cols=136 Identities=18% Similarity=0.220 Sum_probs=93.8
Q ss_pred CCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCChhHHHhc----cc---cccc-cccCCCCCCCCCccceE
Q 005981 515 KKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTLPVIYDR----GL---IGVM-HDWCEPFDTYPRTYDLL 586 (666)
Q Consensus 515 ~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l~~~~er----Gl---ig~~-~~~ce~~~~yp~tyDli 586 (666)
.+.....|||+|||.|.++.+|++..-++ .++.+|.+.+++.+.++ |+ +.+. +|.. ..+|..||+|
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~---~~~p~~~D~v 239 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAHEDL---SGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFF---DPLPAGAGGY 239 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHCTTC---EEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTT---SCCCCSCSEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHCCCC---eEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCC---CCCCCCCcEE
Confidence 34556889999999999999998851111 23333444566555543 54 4444 4442 3455689999
Q ss_pred EeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh----------------------hHHHHHHHHHHhcCcEEEEE
Q 005981 587 HAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI----------------------DVMDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 587 ha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~----------------------~~~~~~~~i~~~l~W~~~~~ 644 (666)
.+..++.++.+. ....+|.++.|+|||||+++|.|.. ...++++++++.-.++....
T Consensus 240 ~~~~vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 318 (332)
T 3i53_A 240 VLSAVLHDWDDL-SAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAA 318 (332)
T ss_dssp EEESCGGGSCHH-HHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEE
T ss_pred EEehhhccCCHH-HHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 999999887653 2368999999999999999997641 11466888889889987654
Q ss_pred eccCCCCCceEEEEEEe
Q 005981 645 ETAEGPHASYRILTADK 661 (666)
Q Consensus 645 ~~~~~~~~~e~~l~~~k 661 (666)
..-. . ..|+.|+|
T Consensus 319 ~~~~---~-~~vie~r~ 331 (332)
T 3i53_A 319 HPIS---Y-VSIVEMTA 331 (332)
T ss_dssp EECS---S-SEEEEEEE
T ss_pred EECC---C-cEEEEEee
Confidence 4322 1 67888876
No 317
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.65 E-value=1.6e-07 Score=91.43 Aligned_cols=96 Identities=16% Similarity=0.057 Sum_probs=69.2
Q ss_pred CCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h 350 (666)
...+|||+|||+|.++..++.. +|+|+|+++.++..++.+ +...++...+...|...++ ++||+|+++..++.
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIEN-LGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGS 124 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHH-TGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHH-HHHcCCCEEEEECchHHcC---CCCCEEEEcCCCcc
Confidence 4579999999999999888765 699999999988777643 3333444455555666654 48999998876555
Q ss_pred ccc-ChHHHHHHHHHhccCCeEEEEE
Q 005981 351 WTR-DDGILLLEVNRMLRAGGYFAWA 375 (666)
Q Consensus 351 ~~~-d~~~~L~el~RvLkPGG~lv~s 375 (666)
+.. ....++.++.++| ||.+++.
T Consensus 125 ~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 125 QRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp SSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred ccCCchHHHHHHHHHhc--CcEEEEE
Confidence 532 2347889999998 6655443
No 318
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.65 E-value=3.5e-08 Score=97.69 Aligned_cols=97 Identities=13% Similarity=0.086 Sum_probs=70.0
Q ss_pred CCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCC-C-CC--C--CCeeE
Q 005981 275 IRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRL-P-YP--S--QAFDL 341 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~L-p-f~--d--~sFDl 341 (666)
..+|||||||+|.++..++.. +|+++|+++.++..++... ...+.. ..+...++... + +. . ++||+
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLW-RQAEAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHH-HHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 479999999999999888763 8999999999988776544 344542 23333343221 1 11 1 68999
Q ss_pred EEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 342 IHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 342 Vv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
|++... ..+...++.++.++|||||.+++..
T Consensus 149 v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 149 AVVDAD----KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EEECSC----STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCC----HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 997543 2445689999999999999999974
No 319
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.64 E-value=3.9e-08 Score=99.37 Aligned_cols=118 Identities=17% Similarity=0.202 Sum_probs=78.5
Q ss_pred eeEeeccccchHHHHHHhhC--CCceEEEEeeccCC-CCChhHHHhc----------cc--cccccccCCC-CCC-C-CC
Q 005981 520 RNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIYDR----------GL--IGVMHDWCEP-FDT-Y-PR 581 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~er----------Gl--ig~~~~~ce~-~~~-y-p~ 581 (666)
..|||+|||+|.++.+|++. +. +|+.+|. +.++..|.++ |+ |.+++...+. ++. + +.
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~p~~-----~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELSPLFPDT-----LILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp EEEEEETCTTCHHHHHHGGGSTTS-----EEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTT
T ss_pred CeEEEEccCCcHHHHHHHHHCCCC-----eEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCc
Confidence 45999999999999999987 33 6777773 5777766532 44 4555555443 321 3 38
Q ss_pred ccceEEeccccc-----cCCCCCCHHHHHHHhhhcccCCeEEEEE-eChhHHHHHHHHHHhcC-cEEE
Q 005981 582 TYDLLHAAGLFS-----VESKRCNMSTIMLEMDRMLRPGGHVYIR-DSIDVMDELQEIGKAMG-WHVT 642 (666)
Q Consensus 582 tyDliha~~~f~-----~~~~~c~~~~~l~E~dRiLRPgG~~ii~-d~~~~~~~~~~i~~~l~-W~~~ 642 (666)
+||+|++...-- |.+.|...+.+|.++.|+|||||.|+|. |..+..+.+.+.+.... |+..
T Consensus 123 ~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 123 QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEEE
T ss_pred CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCCCcccc
Confidence 999998642110 1222333468999999999999999985 77777777777766654 5443
No 320
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.64 E-value=1.2e-07 Score=102.93 Aligned_cols=107 Identities=13% Similarity=0.071 Sum_probs=76.7
Q ss_pred CCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCC-C--ceEEeecccCCC--C--CCCCeeEEEe
Q 005981 275 IRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGA-P--AMVAAFATRRLP--Y--PSQAFDLIHC 344 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~-~--~~~~~~d~e~Lp--f--~d~sFDlVv~ 344 (666)
+.+|||+|||+|.++..++.. +|+++|+++.++..++. .+...++ . ..+...|+..+. + ...+||+|++
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~-n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQ-NVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHH-HHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 478999999999999988865 79999999999988765 4444566 3 344555543331 1 1468999998
Q ss_pred ccccc--------ccccChHHHHHHHHHhccCCeEEEEEECCCCCC
Q 005981 345 SRCRI--------NWTRDDGILLLEVNRMLRAGGYFAWAAQPVYKH 382 (666)
Q Consensus 345 s~~l~--------h~~~d~~~~L~el~RvLkPGG~lv~st~P~~~~ 382 (666)
..... +.......++.++.++|+|||.+++++.+....
T Consensus 300 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 345 (396)
T 3c0k_A 300 DPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMT 345 (396)
T ss_dssp CCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCC
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC
Confidence 64321 111344588999999999999999997654444
No 321
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.64 E-value=2.5e-08 Score=102.87 Aligned_cols=120 Identities=18% Similarity=0.162 Sum_probs=79.5
Q ss_pred eeEeeccccchHHHHHHhhC-CCceEEEEeeccC-CCCChhHHHhcc------------------ccc------------
Q 005981 520 RNVLDMRAGFGGFAAALIEQ-KFDCWVMNVVPVS-GFNTLPVIYDRG------------------LIG------------ 567 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~-~~~vwvmnv~~~~-~~~~l~~~~erG------------------lig------------ 567 (666)
..|||+|||+|.++..++.. +. +|+.+| ++.+++.+.++- +.|
T Consensus 73 ~~vLDiGcG~G~~~~l~~~~~~~-----~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 147 (289)
T 2g72_A 73 RTLIDIGSGPTVYQLLSACSHFE-----DITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQL 147 (289)
T ss_dssp SEEEEETCTTCCGGGTTGGGGCS-----EEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHH
T ss_pred CeEEEECCCcChHHHHhhccCCC-----eEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHH
Confidence 56999999999955444443 44 677777 467777665520 111
Q ss_pred ------cc-cccCCCCC----CCC-CccceEEeccccccCCCC-CCHHHHHHHhhhcccCCeEEEEEeCh----------
Q 005981 568 ------VM-HDWCEPFD----TYP-RTYDLLHAAGLFSVESKR-CNMSTIMLEMDRMLRPGGHVYIRDSI---------- 624 (666)
Q Consensus 568 ------~~-~~~ce~~~----~yp-~tyDliha~~~f~~~~~~-c~~~~~l~E~dRiLRPgG~~ii~d~~---------- 624 (666)
+. .|..+..+ .+| .+||+|.|..+|.+.... .+...+|.|+.|+|||||+++|.+..
T Consensus 148 ~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~ 227 (289)
T 2g72_A 148 RARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEA 227 (289)
T ss_dssp HHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTE
T ss_pred HhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCe
Confidence 11 13322122 233 679999999888774321 24579999999999999999996311
Q ss_pred ------hHHHHHHHHHHhcCcEEEEE
Q 005981 625 ------DVMDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 625 ------~~~~~~~~i~~~l~W~~~~~ 644 (666)
-..+.++++++.-.+++...
T Consensus 228 ~~~~~~~~~~~l~~~l~~aGf~~~~~ 253 (289)
T 2g72_A 228 RLTVVPVSEEEVREALVRSGYKVRDL 253 (289)
T ss_dssp EEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred eeeeccCCHHHHHHHHHHcCCeEEEe
Confidence 13678888999888886543
No 322
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.64 E-value=5.4e-08 Score=99.94 Aligned_cols=132 Identities=14% Similarity=0.293 Sum_probs=91.2
Q ss_pred eeEeeccccchHHHHHHhhC--CCceEEEEeeccCC-CCChhHHHhc----cc--cccc-cccCCCCCCCCCccceEEec
Q 005981 520 RNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVM-HDWCEPFDTYPRTYDLLHAA 589 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~-~~~ce~~~~yp~tyDliha~ 589 (666)
.+|||+|||.|.++.+|++. +. +|+.+|. +.++.++.++ |+ +.+. .|+.+.++ +.+||+|.++
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~~~-----~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~n 183 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERPDC-----EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSN 183 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTS-----EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEEC
T ss_pred CEEEEecCCccHHHHHHHHhCCCC-----EEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEEC
Confidence 46999999999999999865 33 5677774 5777776654 44 4444 34433322 4789999997
Q ss_pred ccc-------------ccCCCC---------CCHHHHHHHhhhcccCCeEEEEEeChhHHHHHHHHHHhcCcEE-EEEec
Q 005981 590 GLF-------------SVESKR---------CNMSTIMLEMDRMLRPGGHVYIRDSIDVMDELQEIGKAMGWHV-TLRET 646 (666)
Q Consensus 590 ~~f-------------~~~~~~---------c~~~~~l~E~dRiLRPgG~~ii~d~~~~~~~~~~i~~~l~W~~-~~~~~ 646 (666)
--+ .+.... ..+..++.++.|+|||||++++.......+.++++++...|+. .....
T Consensus 184 pPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~~~d 263 (276)
T 2b3t_A 184 PPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRD 263 (276)
T ss_dssp CCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCEEEC
T ss_pred CCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEEEec
Confidence 332 222111 1246889999999999999999877777788888888888863 23222
Q ss_pred cCCCCCceEEEEEEe
Q 005981 647 AEGPHASYRILTADK 661 (666)
Q Consensus 647 ~~~~~~~e~~l~~~k 661 (666)
-.+.+++++++|
T Consensus 264 ---~~g~~r~~~~~~ 275 (276)
T 2b3t_A 264 ---YGDNERVTLGRY 275 (276)
T ss_dssp ---TTSSEEEEEEEC
T ss_pred ---CCCCCcEEEEEE
Confidence 234788888875
No 323
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.64 E-value=2.2e-07 Score=97.64 Aligned_cols=130 Identities=15% Similarity=0.211 Sum_probs=92.0
Q ss_pred eeEeeccccchHHHHHHhhC--CCceEEEEeeccCCCCChhHHHhc----cc---cccc-cccCCCCCCCCCccceEEec
Q 005981 520 RNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSGFNTLPVIYDR----GL---IGVM-HDWCEPFDTYPRTYDLLHAA 589 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~~~~l~~~~er----Gl---ig~~-~~~ce~~~~yp~tyDliha~ 589 (666)
.+|||+|||.|.++.+|+++ +. .++.+|.+.+++.+.++ |+ +.+. +|..+ .+|..||+|.+.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~-----~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~D~v~~~ 240 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSA-----RGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQ---EVPSNGDIYLLS 240 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTC-----EEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTT---CCCSSCSEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCC-----EEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCC---CCCCCCCEEEEc
Confidence 78999999999999999887 33 34444445677766554 32 4444 44433 467889999999
Q ss_pred cccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh-------------h------------HHHHHHHHHHhcCcEEEEE
Q 005981 590 GLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI-------------D------------VMDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 590 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~-------------~------------~~~~~~~i~~~l~W~~~~~ 644 (666)
.++.++.+. ....+|.++.|+|||||+++|.|.. + ..+++++++++-.++....
T Consensus 241 ~vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 319 (334)
T 2ip2_A 241 RIIGDLDEA-ASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERI 319 (334)
T ss_dssp SCGGGCCHH-HHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred hhccCCCHH-HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEE
Confidence 998876542 2359999999999999999997531 0 1456778888888886544
Q ss_pred eccCCCCCceEEEEEEe
Q 005981 645 ETAEGPHASYRILTADK 661 (666)
Q Consensus 645 ~~~~~~~~~e~~l~~~k 661 (666)
..-. ....++.++|
T Consensus 320 ~~~~---~~~~~i~~~~ 333 (334)
T 2ip2_A 320 VDLP---METRMIVAAR 333 (334)
T ss_dssp EEET---TTEEEEEEEE
T ss_pred EECC---CCCEEEEEEe
Confidence 3222 2467888887
No 324
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.64 E-value=7.9e-09 Score=107.36 Aligned_cols=97 Identities=15% Similarity=0.218 Sum_probs=68.6
Q ss_pred eeEeeccccchHHHHHHhhC--CCceEEEEeeccCC-CCChhHHHhcc--------------------------------
Q 005981 520 RNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIYDRG-------------------------------- 564 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~erG-------------------------------- 564 (666)
..|||+|||.|.++..|+++ +. .|+.+|- +.+++.|.++-
T Consensus 48 ~~VLDiGCG~G~~~~~la~~~~~~-----~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (292)
T 3g07_A 48 RDVLDLGCNVGHLTLSIACKWGPS-----RMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRK 122 (292)
T ss_dssp SEEEEESCTTCHHHHHHHHHTCCS-----EEEEEESCHHHHHHHHHTC--------------------------------
T ss_pred CcEEEeCCCCCHHHHHHHHHcCCC-----EEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccc
Confidence 46999999999999999987 44 5666663 56777776651
Q ss_pred --------------------------------ccccc-cccCCCC----CCCCCccceEEeccccccCC---CCCCHHHH
Q 005981 565 --------------------------------LIGVM-HDWCEPF----DTYPRTYDLLHAAGLFSVES---KRCNMSTI 604 (666)
Q Consensus 565 --------------------------------lig~~-~~~ce~~----~~yp~tyDliha~~~f~~~~---~~c~~~~~ 604 (666)
-+.+. .|+.+.- ...+.+||+|.|..++.+.+ ....+..+
T Consensus 123 ~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~ 202 (292)
T 3g07_A 123 RSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRM 202 (292)
T ss_dssp -------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHH
Confidence 12222 2222111 11348999999998875443 33456799
Q ss_pred HHHhhhcccCCeEEEEE
Q 005981 605 MLEMDRMLRPGGHVYIR 621 (666)
Q Consensus 605 l~E~dRiLRPgG~~ii~ 621 (666)
+.++.|+|||||++||.
T Consensus 203 l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 203 FRRIYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHhCCCcEEEEe
Confidence 99999999999999996
No 325
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.64 E-value=7.3e-09 Score=104.37 Aligned_cols=98 Identities=17% Similarity=0.156 Sum_probs=67.3
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhccc-----cccc-cccCCCCCCCC-CccceEEeccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRGL-----IGVM-HDWCEPFDTYP-RTYDLLHAAGL 591 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erGl-----ig~~-~~~ce~~~~yp-~tyDliha~~~ 591 (666)
..|||+|||.|.++.+|++.+. -+|+.+| ++.+++.+.++.- +-++ .+|-+-...+| .+||.|..+.+
T Consensus 62 ~rVLdiG~G~G~~~~~~~~~~~----~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQEAPI----DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp EEEEEECCTTSHHHHHHTTSCE----EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CeEEEECCCccHHHHHHHHhCC----cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 3599999999999999998731 2555666 3678888776532 3333 23322233455 89999987655
Q ss_pred cccCC--CCCCHHHHHHHhhhcccCCeEEEEE
Q 005981 592 FSVES--KRCNMSTIMLEMDRMLRPGGHVYIR 621 (666)
Q Consensus 592 f~~~~--~~c~~~~~l~E~dRiLRPgG~~ii~ 621 (666)
.+... +.-+.+.++.|+.|+|||||.|++-
T Consensus 138 ~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 44332 2223568999999999999999985
No 326
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.62 E-value=4.5e-08 Score=102.49 Aligned_cols=135 Identities=12% Similarity=0.116 Sum_probs=85.9
Q ss_pred HhcccCCCceeeEeeccccchHHHHHHhhC--CCceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCCCCC
Q 005981 510 RALHWKKMKLRNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFDTYP 580 (666)
Q Consensus 510 ~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~~yp 580 (666)
.++++..+ ..|||+|||.|++++.++.+ |+ .|+.+|. +.+++.|.++ |+ +.+.+.-...++ +
T Consensus 116 ~la~l~~g--~rVLDIGcG~G~~ta~~lA~~~ga-----~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d 186 (298)
T 3fpf_A 116 ALGRFRRG--ERAVFIGGGPLPLTGILLSHVYGM-----RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--G 186 (298)
T ss_dssp HHTTCCTT--CEEEEECCCSSCHHHHHHHHTTCC-----EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--G
T ss_pred HHcCCCCc--CEEEEECCCccHHHHHHHHHccCC-----EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--C
Confidence 34556655 35999999999988665433 65 5666663 5777777665 66 444443333332 3
Q ss_pred CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeChhHHH----HHHHHHHhcCcEEEEEeccCCCCCceEE
Q 005981 581 RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSIDVMD----ELQEIGKAMGWHVTLRETAEGPHASYRI 656 (666)
Q Consensus 581 ~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~~~~----~~~~i~~~l~W~~~~~~~~~~~~~~e~~ 656 (666)
++||+|.+..+ .-+.+.++.|+.|+|||||.+++++...... .+.+ ...-.|+.....+-.+ .....|
T Consensus 187 ~~FDvV~~~a~------~~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~-~~~~gf~~~~~~~p~~-~v~N~v 258 (298)
T 3fpf_A 187 LEFDVLMVAAL------AEPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSD-DDITGFRRAGVVLPSG-KVNNTS 258 (298)
T ss_dssp CCCSEEEECTT------CSCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCT-GGGTTEEEEEEECCCT-TCCCEE
T ss_pred CCcCEEEECCC------ccCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCCh-hhhhhhhheeEECCCC-CcCcEE
Confidence 89999997643 1245799999999999999999997533211 1111 1222777766655333 234567
Q ss_pred EEEEe
Q 005981 657 LTADK 661 (666)
Q Consensus 657 l~~~k 661 (666)
.+++|
T Consensus 259 v~a~k 263 (298)
T 3fpf_A 259 VLVFK 263 (298)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 77887
No 327
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.62 E-value=2.3e-08 Score=106.66 Aligned_cols=92 Identities=12% Similarity=0.161 Sum_probs=69.0
Q ss_pred CCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEecccccc
Q 005981 275 IRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRIN 350 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h 350 (666)
..+|||||||+|.++..++++ +++++|+ +.++..+ ++. ....+...|+.. +++ +||+|+++.++++
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a-----~~~-~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~ 263 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNL-----TGN-ENLNFVGGDMFK-SIP--SADAVLLKWVLHD 263 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSC-----CCC-SSEEEEECCTTT-CCC--CCSEEEEESCGGG
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhc-----ccC-CCcEEEeCccCC-CCC--CceEEEEcccccC
Confidence 478999999999999888754 6889998 5555322 211 123344455555 555 4999999999888
Q ss_pred cccChH--HHHHHHHHhccC---CeEEEEEEC
Q 005981 351 WTRDDG--ILLLEVNRMLRA---GGYFAWAAQ 377 (666)
Q Consensus 351 ~~~d~~--~~L~el~RvLkP---GG~lv~st~ 377 (666)
| ++.. .+|+++.++||| ||.+++.+.
T Consensus 264 ~-~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 264 W-NDEQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp S-CHHHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred C-CHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 8 5655 999999999999 999999864
No 328
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.62 E-value=6.5e-08 Score=104.41 Aligned_cols=97 Identities=20% Similarity=0.240 Sum_probs=72.6
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCChhHHHhc----cc---cccccccCCCCCCCCCccceEEecccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTLPVIYDR----GL---IGVMHDWCEPFDTYPRTYDLLHAAGLF 592 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l~~~~er----Gl---ig~~~~~ce~~~~yp~tyDliha~~~f 592 (666)
..|||+|||+|.++..|++.|.. .|+.+|...++..+.++ |+ |.+++...+.+. +|..||+|+|..+.
T Consensus 65 ~~VLDlGcGtG~ls~~la~~g~~----~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQAGAR----KVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDIS-LPEKVDVIISEWMG 139 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCS----EEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCC-CSSCEEEEEECCCB
T ss_pred CEEEEeccCcCHHHHHHHhcCCC----EEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcC-cCCcceEEEEcChh
Confidence 46999999999999999999751 56666644677666543 44 566666655554 46899999997544
Q ss_pred ccCCCCCCHHHHHHHhhhcccCCeEEEEE
Q 005981 593 SVESKRCNMSTIMLEMDRMLRPGGHVYIR 621 (666)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRPgG~~ii~ 621 (666)
......-.++.++.+++|+|||||.+|+.
T Consensus 140 ~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 44444445678999999999999999885
No 329
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.62 E-value=1.9e-07 Score=98.98 Aligned_cols=135 Identities=14% Similarity=0.195 Sum_probs=92.8
Q ss_pred eeeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCChhHHHhc----cc---cccc-cccCCCCCCCCCccceEEecc
Q 005981 519 LRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTLPVIYDR----GL---IGVM-HDWCEPFDTYPRTYDLLHAAG 590 (666)
Q Consensus 519 iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l~~~~er----Gl---ig~~-~~~ce~~~~yp~tyDliha~~ 590 (666)
...|||+|||.|.++.+|++..-.+ .++-+|.+.+++.+.++ |+ +.+. +|..+.-...|..||+|.+..
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 256 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQL---TGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLND 256 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTC---EEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEES
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCC---eEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEec
Confidence 6789999999999999998862111 33334444566655543 54 4343 333222111467899999999
Q ss_pred ccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh---------------------------hHHHHHHHHHHhcCcEEEE
Q 005981 591 LFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI---------------------------DVMDELQEIGKAMGWHVTL 643 (666)
Q Consensus 591 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~---------------------------~~~~~~~~i~~~l~W~~~~ 643 (666)
++.++.+. ....+|.++.|+|||||+++|.|.. ...+.+++++++-.+++..
T Consensus 257 vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (352)
T 3mcz_A 257 CLHYFDAR-EAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGE 335 (352)
T ss_dssp CGGGSCHH-HHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred ccccCCHH-HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceee
Confidence 99887642 2369999999999999999997520 0145678888888998775
Q ss_pred EeccCCCCCceEEEEEEeC
Q 005981 644 RETAEGPHASYRILTADKR 662 (666)
Q Consensus 644 ~~~~~~~~~~e~~l~~~k~ 662 (666)
... +...+++++|+
T Consensus 336 ~~~-----g~~~l~~a~kp 349 (352)
T 3mcz_A 336 RSI-----GRYTLLIGQRS 349 (352)
T ss_dssp EEE-----TTEEEEEEECC
T ss_pred ecc-----CceEEEEEecC
Confidence 322 35789999985
No 330
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.62 E-value=6e-08 Score=100.74 Aligned_cols=108 Identities=18% Similarity=0.180 Sum_probs=73.4
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCC--CceEEeecccCC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRL 332 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~--~~~~~~~d~e~L 332 (666)
..++.+.+.+.. .+..+|||||||+|.++..|++. +|+|+|+++.++..++.+.. ..+. ...+...|+..+
T Consensus 15 ~i~~~i~~~~~~----~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 15 LIINSIIDKAAL----RPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQ-GTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp HHHHHHHHHTCC----CTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHT-TSTTGGGEEEEESCTTTS
T ss_pred HHHHHHHHhcCC----CCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHH-hcCCCCceEEEEcceecc
Confidence 456677776652 34579999999999999999865 89999999998877664332 2222 234555567666
Q ss_pred CCCCCCeeEEEecccccccccChH-HHH--------------HHH--HHhccCCeEE
Q 005981 333 PYPSQAFDLIHCSRCRINWTRDDG-ILL--------------LEV--NRMLRAGGYF 372 (666)
Q Consensus 333 pf~d~sFDlVv~s~~l~h~~~d~~-~~L--------------~el--~RvLkPGG~l 372 (666)
+++ +||+|+++.. ++|..+.. .++ +|+ +++|+|||.+
T Consensus 90 ~~~--~fD~vv~nlp-y~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~ 143 (285)
T 1zq9_A 90 DLP--FFDTCVANLP-YQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKL 143 (285)
T ss_dssp CCC--CCSEEEEECC-GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTT
T ss_pred cch--hhcEEEEecC-cccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcc
Confidence 665 7999997543 55533222 222 333 3699999987
No 331
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.61 E-value=8.8e-08 Score=102.37 Aligned_cols=99 Identities=18% Similarity=0.253 Sum_probs=70.2
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCCCCCCCeeEEEecccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPYPSQAFDLIHCSRCR 348 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lpf~d~sFDlVv~s~~l 348 (666)
...+|||||||+|.++..++++ +++..|+ |..+..++...+ ..+.. ..+...|+...+.+ .+|+|++..++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~-~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vl 254 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFS-FQEEEQIDFQEGDFFKDPLP--EADLYILARVL 254 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSC-C--CCSEEEEESCTTTSCCC--CCSEEEEESSG
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhh-hcccCceeeecCccccCCCC--CceEEEeeeec
Confidence 4578999999999999988876 6777776 545554442221 11222 23444555444444 47999999999
Q ss_pred cccccCh--HHHHHHHHHhccCCeEEEEEEC
Q 005981 349 INWTRDD--GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 349 ~h~~~d~--~~~L~el~RvLkPGG~lv~st~ 377 (666)
|+| +|. ..+|++++++|+|||.+++...
T Consensus 255 h~~-~d~~~~~iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 255 HDW-ADGKCSHLLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp GGS-CHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ccC-CHHHHHHHHHHHHhhCCCCCEEEEEEe
Confidence 999 444 4789999999999999999875
No 332
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.61 E-value=9e-08 Score=99.42 Aligned_cols=116 Identities=16% Similarity=0.219 Sum_probs=78.4
Q ss_pred cHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeec
Q 005981 254 GADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFA 328 (666)
Q Consensus 254 g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d 328 (666)
.....++.+.+.+.. ....+|||+|||+|.++..++.. +|+|+|+|+.++..++. .+...++. ..+...|
T Consensus 107 ~te~lv~~~l~~~~~----~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~-n~~~~~l~~~v~~~~~D 181 (284)
T 1nv8_A 107 ETEELVELALELIRK----YGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARK-NAERHGVSDRFFVRKGE 181 (284)
T ss_dssp THHHHHHHHHHHHHH----HTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHH-HHHHTTCTTSEEEEESS
T ss_pred hHHHHHHHHHHHhcc----cCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCceEEEECc
Confidence 344566666665542 13368999999999988887643 89999999999988775 44445554 3444445
Q ss_pred ccCCCCCCCCe---eEEEecccccc----------cc--------cChHHHHHHHH-HhccCCeEEEEEE
Q 005981 329 TRRLPYPSQAF---DLIHCSRCRIN----------WT--------RDDGILLLEVN-RMLRAGGYFAWAA 376 (666)
Q Consensus 329 ~e~Lpf~d~sF---DlVv~s~~l~h----------~~--------~d~~~~L~el~-RvLkPGG~lv~st 376 (666)
... +++ ++| |+|+|+...+. +. .+...+++++. +.|+|||.+++..
T Consensus 182 ~~~-~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 182 FLE-PFK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp TTG-GGG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred chh-hcc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 433 222 578 99998632221 10 11227899999 9999999999863
No 333
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.61 E-value=1.5e-07 Score=89.78 Aligned_cols=126 Identities=12% Similarity=0.097 Sum_probs=86.9
Q ss_pred eEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhccccccccccCCCCCCCC-CccceEEeccccccCCCC
Q 005981 521 NVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRGLIGVMHDWCEPFDTYP-RTYDLLHAAGLFSVESKR 598 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erGlig~~~~~ce~~~~yp-~tyDliha~~~f~~~~~~ 598 (666)
.|||+|||+|.++.+|++++ +|+.+|. +.+++. ..+ +.+.+...+. .++ .+||+|.|+..|....+.
T Consensus 26 ~vLD~GcG~G~~~~~l~~~~------~v~gvD~s~~~~~~--~~~-~~~~~~d~~~--~~~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKRN------TVVSTDLNIRALES--HRG-GNLVRADLLC--SINQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp EEEEETCTTCHHHHHHTTTS------EEEEEESCHHHHHT--CSS-SCEEECSTTT--TBCGGGCSEEEECCCCBTTCCC
T ss_pred eEEEeccCccHHHHHHHhcC------cEEEEECCHHHHhc--ccC-CeEEECChhh--hcccCCCCEEEECCCCccCCcc
Confidence 69999999999999999985 5666663 455555 222 3444333222 334 899999998777643322
Q ss_pred ------CCHHHHHHHhhhcccCCeEEEEEe-ChhHHHHHHHHHHhcCcEEEEEeccCCCCCceEEEEEE
Q 005981 599 ------CNMSTIMLEMDRMLRPGGHVYIRD-SIDVMDELQEIGKAMGWHVTLRETAEGPHASYRILTAD 660 (666)
Q Consensus 599 ------c~~~~~l~E~dRiLRPgG~~ii~d-~~~~~~~~~~i~~~l~W~~~~~~~~~~~~~~e~~l~~~ 660 (666)
.+...++.++-|.| |||.+++.. .....+++.++++...|+.......... -|++++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~--~e~~~~~~ 160 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKIL--GETVYIIK 160 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECS--SSEEEEEE
T ss_pred ccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccC--CceEEEEE
Confidence 12247888888888 999999975 4456888999999999998665544332 35555544
No 334
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.61 E-value=1.1e-07 Score=105.02 Aligned_cols=103 Identities=14% Similarity=0.145 Sum_probs=73.7
Q ss_pred CCCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCC--CCCCCeeEEEec
Q 005981 274 HIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLP--YPSQAFDLIHCS 345 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lp--f~d~sFDlVv~s 345 (666)
++.+|||+|||+|..+..++. ..|+++|+++.++..++. .+...|+. ..+...|...++ +++++||+|++.
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~-~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D 337 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKD-FVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLD 337 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHH-HHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHH-HHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEc
Confidence 457999999999998888775 379999999998877764 34445653 344455666665 555789999952
Q ss_pred ----c-cccccccCh----------------HHHHHHHHHhccCCeEEEEEEC
Q 005981 346 ----R-CRINWTRDD----------------GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 346 ----~-~l~h~~~d~----------------~~~L~el~RvLkPGG~lv~st~ 377 (666)
. ..++-.++. ..+|.++.++|||||.+++++.
T Consensus 338 ~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 338 APCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp CCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred CCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 1 112211221 4689999999999999999975
No 335
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.61 E-value=1e-07 Score=96.84 Aligned_cols=101 Identities=17% Similarity=0.018 Sum_probs=75.4
Q ss_pred CCCCeEEEECCCCchhHHHhccC-CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEeccccccc
Q 005981 273 HHIRVVMDAGCGVASFGAYLLPR-NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINW 351 (666)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~-~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~ 351 (666)
..+.+|||||||+|.++..+... .++++|+++.++..++.. +...+.+..+...|....+.+ ++||+|++.-+++++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~~-~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk~lh~L 181 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITPF-AREKDWDFTFALQDVLCAPPA-EAGDLALIFKLLPLL 181 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHHH-HHHTTCEEEEEECCTTTSCCC-CBCSEEEEESCHHHH
T ss_pred CCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHHH-HHhcCCCceEEEeecccCCCC-CCcchHHHHHHHHHh
Confidence 34679999999999999887744 999999999999877644 555566666666666655655 589999988776666
Q ss_pred ccChHHHHHHHHHhccCCeEEEEE
Q 005981 352 TRDDGILLLEVNRMLRAGGYFAWA 375 (666)
Q Consensus 352 ~~d~~~~L~el~RvLkPGG~lv~s 375 (666)
.......+.++.+.|+++|.++-.
T Consensus 182 E~q~~~~~~~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 182 EREQAGSAMALLQSLNTPRMAVSF 205 (253)
T ss_dssp HHHSTTHHHHHHHHCBCSEEEEEE
T ss_pred hhhchhhHHHHHHHhcCCCEEEEc
Confidence 322334445899999999887554
No 336
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.61 E-value=5.6e-08 Score=97.36 Aligned_cols=126 Identities=11% Similarity=0.248 Sum_probs=83.0
Q ss_pred eeEeeccccchHHHHHHhh--CCCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCC-CC-CCCCccceEE
Q 005981 520 RNVLDMRAGFGGFAAALIE--QKFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEP-FD-TYPRTYDLLH 587 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~--~~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~-~~-~yp~tyDlih 587 (666)
.+|||+|||.|.++.+|++ .+. .|+.+|. +.+++.+.++ |+ +.+.+..++. .+ ..+.+||+|.
T Consensus 73 ~~vLDiG~G~G~~~~~la~~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~ 147 (232)
T 3ntv_A 73 KNILEIGTAIGYSSMQFASISDDI-----HVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIF 147 (232)
T ss_dssp CEEEEECCSSSHHHHHHHTTCTTC-----EEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEE
T ss_pred CEEEEEeCchhHHHHHHHHhCCCC-----EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEE
Confidence 4699999999999999998 344 5666663 4666666543 54 4455444333 33 3358999999
Q ss_pred eccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC-----------------hhHHHHHHHHH----HhcCcEEEEEec
Q 005981 588 AAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS-----------------IDVMDELQEIG----KAMGWHVTLRET 646 (666)
Q Consensus 588 a~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~-----------------~~~~~~~~~i~----~~l~W~~~~~~~ 646 (666)
+... ...+..++.++.|+|||||++++.+. ......++++. +.-+|.......
T Consensus 148 ~~~~------~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~ 221 (232)
T 3ntv_A 148 IDAA------KAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNI 221 (232)
T ss_dssp EETT------SSSHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEEEEECS
T ss_pred EcCc------HHHHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 7732 33467899999999999999999421 11123344433 344677666655
Q ss_pred cCCCCCceEEEEEEeC
Q 005981 647 AEGPHASYRILTADKR 662 (666)
Q Consensus 647 ~~~~~~~e~~l~~~k~ 662 (666)
.+ .+.+++|+
T Consensus 222 ~d------G~~i~~k~ 231 (232)
T 3ntv_A 222 DD------GLAISIKG 231 (232)
T ss_dssp TT------CEEEEEEC
T ss_pred CC------ceEEEEEC
Confidence 44 48888874
No 337
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.60 E-value=3.2e-08 Score=94.10 Aligned_cols=119 Identities=19% Similarity=0.267 Sum_probs=82.6
Q ss_pred hcccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc---ccccc-ccCCCCCCCCC
Q 005981 511 ALHWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMH-DWCEPFDTYPR 581 (666)
Q Consensus 511 ~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~-~~ce~~~~yp~ 581 (666)
.+.+..+ .+|||+|||.|.++..|++.+. +|+.+|. +.+++.+.++ |+ +.+.+ +..+.++. ..
T Consensus 28 ~~~~~~~--~~vldiG~G~G~~~~~l~~~~~-----~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~ 99 (192)
T 1l3i_A 28 LAEPGKN--DVAVDVGCGTGGVTLELAGRVR-----RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCK-IP 99 (192)
T ss_dssp HHCCCTT--CEEEEESCTTSHHHHHHHTTSS-----EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTT-SC
T ss_pred hcCCCCC--CEEEEECCCCCHHHHHHHHhcC-----EEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhccc-CC
Confidence 3444444 3699999999999999999864 5666663 5666666553 33 33332 22221221 15
Q ss_pred ccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC-hhHHHHHHHHHHhcCcEEEE
Q 005981 582 TYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS-IDVMDELQEIGKAMGWHVTL 643 (666)
Q Consensus 582 tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~-~~~~~~~~~i~~~l~W~~~~ 643 (666)
+||+|.+.+.+. .+..+|.++.|+|+|||.+++.+. .+....+.++++...|++..
T Consensus 100 ~~D~v~~~~~~~------~~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~ 156 (192)
T 1l3i_A 100 DIDIAVVGGSGG------ELQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNI 156 (192)
T ss_dssp CEEEEEESCCTT------CHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEE
T ss_pred CCCEEEECCchH------HHHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceEE
Confidence 899999986553 357999999999999999999864 55678888888888776543
No 338
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.60 E-value=8.6e-08 Score=105.17 Aligned_cols=103 Identities=18% Similarity=0.142 Sum_probs=74.7
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCC--CCCCCeeEEEec--
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP--YPSQAFDLIHCS-- 345 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lp--f~d~sFDlVv~s-- 345 (666)
++.+|||+|||+|..+..+++. .|+++|+++.++..++.+ +...+....+...|...++ +++++||+|++.
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~-~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~P 324 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDN-LKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAP 324 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHH-HHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECC
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-HHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCC
Confidence 4579999999999988888753 799999999998877644 4445655555556666655 556789999952
Q ss_pred --cc-ccccccCh----------------HHHHHHHHHhccCCeEEEEEEC
Q 005981 346 --RC-RINWTRDD----------------GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 346 --~~-l~h~~~d~----------------~~~L~el~RvLkPGG~lv~st~ 377 (666)
.. .++-.++. ..+|.++.++|||||.+++++.
T Consensus 325 csg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 325 CSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp CCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred CCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 11 11111221 3779999999999999999974
No 339
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.60 E-value=1.3e-07 Score=99.18 Aligned_cols=135 Identities=16% Similarity=0.217 Sum_probs=91.8
Q ss_pred ceeeEeeccccchHHHHHHhhC--CCceEEEEeeccCCCCChhHHHhc----cc---cccccccCCCCCCCCCccceEEe
Q 005981 518 KLRNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSGFNTLPVIYDR----GL---IGVMHDWCEPFDTYPRTYDLLHA 588 (666)
Q Consensus 518 ~iRnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~~~~l~~~~er----Gl---ig~~~~~ce~~~~yp~tyDliha 588 (666)
.-..|||+|||.|.++.+|+++ +. .++.+|.+.+++.+.++ |+ +.+.+...+.. .+|..||+|.+
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~-----~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~ 238 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNA-----EIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEV-DYGNDYDLVLL 238 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTC-----EEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTS-CCCSCEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCC-----eEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccC-CCCCCCcEEEE
Confidence 3457999999999999999987 43 45555543566666554 43 44443332222 35666999999
Q ss_pred ccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeChh---------------------------HHHHHHHHHHhcCcEE
Q 005981 589 AGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSID---------------------------VMDELQEIGKAMGWHV 641 (666)
Q Consensus 589 ~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~---------------------------~~~~~~~i~~~l~W~~ 641 (666)
..++.+..+. +...+|.++.|+|||||+++|.|... ..++++++++.-.++.
T Consensus 239 ~~~l~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~ 317 (335)
T 2r3s_A 239 PNFLHHFDVA-TCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSH 317 (335)
T ss_dssp ESCGGGSCHH-HHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSE
T ss_pred cchhccCCHH-HHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCe
Confidence 9988877432 34699999999999999999974310 1567788888888986
Q ss_pred EEEeccCCCCCceEEEEEEeC
Q 005981 642 TLRETAEGPHASYRILTADKR 662 (666)
Q Consensus 642 ~~~~~~~~~~~~e~~l~~~k~ 662 (666)
.....-.+ ...+++++++
T Consensus 318 ~~~~~~~~---~~~~i~~~~~ 335 (335)
T 2r3s_A 318 SQLHSLPT---TQQQVIVAYK 335 (335)
T ss_dssp EEEECCTT---SSSEEEEEEC
T ss_pred eeEEECCC---CceeEEEecC
Confidence 55433222 3467777653
No 340
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.60 E-value=5.9e-08 Score=104.62 Aligned_cols=100 Identities=16% Similarity=0.091 Sum_probs=72.0
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCC--CceEEeecccCCCCCCCCeeEEEeccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGA--PAMVAAFATRRLPYPSQAFDLIHCSRC 347 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~--~~~~~~~d~e~Lpf~d~sFDlVv~s~~ 347 (666)
...+|||+|||+|.++..++.. +|+|+|+++.++..++.+ +...++ ...+...|+..+++++++||+|+|+..
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n-~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npP 295 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMN-ALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLP 295 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHH-HHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECC
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH-HHHcCCCCceEEEECChhhCCcccCCcCEEEECCC
Confidence 4578999999999998888754 799999999999888754 445565 345666778888888889999998654
Q ss_pred cccccc------C-hHHHHHHHHHhccCCeEEEEEE
Q 005981 348 RINWTR------D-DGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 348 l~h~~~------d-~~~~L~el~RvLkPGG~lv~st 376 (666)
+..... + ...++.++.++| ||.+++.+
T Consensus 296 yg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~ 329 (373)
T 3tm4_A 296 YGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFIT 329 (373)
T ss_dssp CC------CCHHHHHHHHHHHHHHHE--EEEEEEEE
T ss_pred CCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEE
Confidence 322211 1 146788899999 44444443
No 341
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.60 E-value=1e-08 Score=102.52 Aligned_cols=100 Identities=17% Similarity=0.131 Sum_probs=68.1
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhcc----c-cccccccCCCC-CCCC-CccceEEe-cc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRG----L-IGVMHDWCEPF-DTYP-RTYDLLHA-AG 590 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erG----l-ig~~~~~ce~~-~~yp-~tyDliha-~~ 590 (666)
..|||+|||+|.++.+|++.+. -+|+.+|. +.+++.+.++. . +.+++...+.+ ..++ .+||+|.+ ..
T Consensus 62 ~~vLDiGcGtG~~~~~l~~~~~----~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQEAPI----DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp EEEEEECCTTSHHHHHHHTSCE----EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CeEEEEeccCCHHHHHHHhcCC----CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 4699999999999999988753 26777774 68888887764 2 34444333333 2344 89999998 32
Q ss_pred ccc-cCCCCCCHHHHHHHhhhcccCCeEEEEEeC
Q 005981 591 LFS-VESKRCNMSTIMLEMDRMLRPGGHVYIRDS 623 (666)
Q Consensus 591 ~f~-~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~ 623 (666)
.+. +..+.-..+.++.|+.|+|||||++++.+.
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 221 111122234789999999999999998753
No 342
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.60 E-value=9.1e-08 Score=103.36 Aligned_cols=107 Identities=17% Similarity=0.094 Sum_probs=75.9
Q ss_pred CCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCCC----CCCCeeEEEeccc
Q 005981 275 IRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLPY----PSQAFDLIHCSRC 347 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lpf----~d~sFDlVv~s~~ 347 (666)
..+|||+|||+|.++..++.. +|+++|+++.++..++. .+...++. ..+...|+..+.. .+++||+|++...
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~-n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP 288 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEE-NARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPP 288 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHH-HHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHH-HHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCC
Confidence 368999999999999888865 89999999999988774 44445554 3444445433321 2578999998543
Q ss_pred cccc--------ccChHHHHHHHHHhccCCeEEEEEECCCCCC
Q 005981 348 RINW--------TRDDGILLLEVNRMLRAGGYFAWAAQPVYKH 382 (666)
Q Consensus 348 l~h~--------~~d~~~~L~el~RvLkPGG~lv~st~P~~~~ 382 (666)
.... ..+...++.++.++|+|||.+++++.+....
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 331 (382)
T 1wxx_A 289 AFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMT 331 (382)
T ss_dssp CSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC
Confidence 2221 1233478899999999999999997644333
No 343
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.59 E-value=1.2e-07 Score=102.81 Aligned_cols=108 Identities=12% Similarity=0.030 Sum_probs=76.4
Q ss_pred CCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCCCC----CCCCeeEEEe
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPY----PSQAFDLIHC 344 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~Lpf----~d~sFDlVv~ 344 (666)
...+|||+|||+|.++..++.. +|+++|+++.++..++.+ +...++. ..+...|+..+.. ..++||+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n-~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKEN-AKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHH-HHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH-HHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 4479999999999999988864 799999999999888754 4445653 3444445433321 2578999998
Q ss_pred ccccccc--------ccChHHHHHHHHHhccCCeEEEEEECCCCCC
Q 005981 345 SRCRINW--------TRDDGILLLEVNRMLRAGGYFAWAAQPVYKH 382 (666)
Q Consensus 345 s~~l~h~--------~~d~~~~L~el~RvLkPGG~lv~st~P~~~~ 382 (666)
....... ..+...++.++.++|+|||.+++++......
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~ 341 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVD 341 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCC
Confidence 5432221 1234578899999999999999987543333
No 344
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.59 E-value=1.5e-07 Score=91.15 Aligned_cols=132 Identities=13% Similarity=0.164 Sum_probs=75.3
Q ss_pred eeEeeccccchHHHHHHhhC----CCceEEEEeeccCCCCChhHHHhccccccccccCCCCC------------------
Q 005981 520 RNVLDMRAGFGGFAAALIEQ----KFDCWVMNVVPVSGFNTLPVIYDRGLIGVMHDWCEPFD------------------ 577 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~----~~~vwvmnv~~~~~~~~l~~~~erGlig~~~~~ce~~~------------------ 577 (666)
..|||+|||.|+++.+|+++ +..|+.+-+.+. .. ..++ .+.+...+...
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~-----~~---~~~v-~~~~~d~~~~~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM-----DP---IPNV-YFIQGEIGKDNMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC-----CC---CTTC-EEEECCTTTTSSCCC-----------CHH
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc-----CC---CCCc-eEEEccccchhhhhhccccccccccchhh
Confidence 46999999999999999876 243444444332 11 0122 22222222222
Q ss_pred ------CCC-CccceEEeccccccCCCC-CC-------HHHHHHHhhhcccCCeEEEEEeCh-hHHHHHHHHHHhcCcE-
Q 005981 578 ------TYP-RTYDLLHAAGLFSVESKR-CN-------MSTIMLEMDRMLRPGGHVYIRDSI-DVMDELQEIGKAMGWH- 640 (666)
Q Consensus 578 ------~yp-~tyDliha~~~f~~~~~~-c~-------~~~~l~E~dRiLRPgG~~ii~d~~-~~~~~~~~i~~~l~W~- 640 (666)
.++ .+||+|.|+..+...+.. -+ ...+|.++.|+|||||++++.... +....+...++.. |.
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~~-f~~ 173 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGM-FQL 173 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHTT-EEE
T ss_pred HHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHHH-Hhe
Confidence 034 799999998665442210 00 124889999999999999996322 2344455555553 43
Q ss_pred EEEEec-cCCCCCceEEEEEEe
Q 005981 641 VTLRET-AEGPHASYRILTADK 661 (666)
Q Consensus 641 ~~~~~~-~~~~~~~e~~l~~~k 661 (666)
+..... ...+...|..+||++
T Consensus 174 v~~~~~~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 174 VHTTKPKASRNESREIYLVCKN 195 (201)
T ss_dssp EEECCCC-----CCEEEEEEEE
T ss_pred EEEECCcccCCcCceEEEEEec
Confidence 333222 222356799999987
No 345
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.59 E-value=3.1e-08 Score=103.43 Aligned_cols=102 Identities=13% Similarity=0.072 Sum_probs=73.6
Q ss_pred eeeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhcc-----------c--cccccccCCCCC---CC--
Q 005981 519 LRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRG-----------L--IGVMHDWCEPFD---TY-- 579 (666)
Q Consensus 519 iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erG-----------l--ig~~~~~ce~~~---~y-- 579 (666)
-.+|||+|||.|.++..|++.+. -+|+.+| ++.+++.+.++. . +.+.+..++.++ .+
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~----~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 110 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRI----NKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD 110 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTC----SEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS
T ss_pred CCEEEEECCCCcHHHHHHHhcCC----CEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc
Confidence 35799999999999999997632 1566666 357777776652 1 444555555554 24
Q ss_pred -CCccceEEeccccccC-CCCCCHHHHHHHhhhcccCCeEEEEEeCh
Q 005981 580 -PRTYDLLHAAGLFSVE-SKRCNMSTIMLEMDRMLRPGGHVYIRDSI 624 (666)
Q Consensus 580 -p~tyDliha~~~f~~~-~~~c~~~~~l~E~dRiLRPgG~~ii~d~~ 624 (666)
+.+||+|.|..++.+. .+.-+...+|.++.|+|||||+++++...
T Consensus 111 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 111 PQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp TTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 2599999999877654 33334569999999999999999998543
No 346
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.59 E-value=1.3e-07 Score=95.54 Aligned_cols=109 Identities=17% Similarity=0.069 Sum_probs=77.6
Q ss_pred HHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCc--eEEeecccC
Q 005981 258 YLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPA--MVAAFATRR 331 (666)
Q Consensus 258 ~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~--~~~~~d~e~ 331 (666)
.++.+.++++ ++.+|||||||+|.++..++.. +|+++|+++.++..|+.+ +...++.. .+...|...
T Consensus 11 RL~~i~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N-~~~~gl~~~I~~~~gD~l~ 83 (230)
T 3lec_A 11 RLQKVANYVP------KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKN-VSEHGLTSKIDVRLANGLS 83 (230)
T ss_dssp HHHHHHTTSC------TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHH-HHHTTCTTTEEEEECSGGG
T ss_pred HHHHHHHhCC------CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEECchhh
Confidence 4556666664 3378999999999999988875 699999999999888754 44556543 344445444
Q ss_pred CCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 332 LPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 332 Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
...+++.||+|+..+..- .-...+|.+..+.|+++|+|+++.
T Consensus 84 ~~~~~~~~D~IviaGmGg---~lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 84 AFEEADNIDTITICGMGG---RLIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp GCCGGGCCCEEEEEEECH---HHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred ccccccccCEEEEeCCch---HHHHHHHHHHHHHhCcCCEEEEEC
Confidence 333444799987544311 123578888899999999999985
No 347
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.59 E-value=2.8e-07 Score=85.90 Aligned_cols=131 Identities=12% Similarity=0.136 Sum_probs=80.0
Q ss_pred eEeeccccchHHHHHHhhC-C--CceEEEEeeccCCCCChhHHHhccccccccccCCCCCC-------CC-CccceEEec
Q 005981 521 NVLDMRAGFGGFAAALIEQ-K--FDCWVMNVVPVSGFNTLPVIYDRGLIGVMHDWCEPFDT-------YP-RTYDLLHAA 589 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~-~--~~vwvmnv~~~~~~~~l~~~~erGlig~~~~~ce~~~~-------yp-~tyDliha~ 589 (666)
+|||+|||.|.++.+|++. | ..|+.+.+.+ +++. .+ +.+.+...+..+. ++ .+||+|.++
T Consensus 25 ~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-----~~~~---~~-~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~ 95 (180)
T 1ej0_A 25 TVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-----MDPI---VG-VDFLQGDFRDELVMKALLERVGDSKVQVVMSD 95 (180)
T ss_dssp EEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-----CCCC---TT-EEEEESCTTSHHHHHHHHHHHTTCCEEEEEEC
T ss_pred eEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-----cccc---Cc-EEEEEcccccchhhhhhhccCCCCceeEEEEC
Confidence 6999999999999999887 3 4344433333 3322 11 2333322222220 33 799999998
Q ss_pred cccccCCCC--CC------HHHHHHHhhhcccCCeEEEEEeC-hhHHHHHHHHHHhcCcEEEEE-ec-cCCCCCceEEEE
Q 005981 590 GLFSVESKR--CN------MSTIMLEMDRMLRPGGHVYIRDS-IDVMDELQEIGKAMGWHVTLR-ET-AEGPHASYRILT 658 (666)
Q Consensus 590 ~~f~~~~~~--c~------~~~~l~E~dRiLRPgG~~ii~d~-~~~~~~~~~i~~~l~W~~~~~-~~-~~~~~~~e~~l~ 658 (666)
..+...... .. ...+|.++.|+|||||.+++... ......+.+.+... |+.... .. .......|.+++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 174 (180)
T 1ej0_A 96 MAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSL-FTKVKVRKPDSSRARSREVYIV 174 (180)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHH-EEEEEEECCTTSCTTCCEEEEE
T ss_pred CCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHHh-hhhEEeecCCcccccCceEEEE
Confidence 776554321 00 15889999999999999999743 23344455555543 665432 22 222356788998
Q ss_pred EEe
Q 005981 659 ADK 661 (666)
Q Consensus 659 ~~k 661 (666)
|++
T Consensus 175 ~~~ 177 (180)
T 1ej0_A 175 ATG 177 (180)
T ss_dssp EEE
T ss_pred Ecc
Confidence 876
No 348
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.59 E-value=2e-07 Score=95.59 Aligned_cols=100 Identities=11% Similarity=-0.027 Sum_probs=74.0
Q ss_pred CCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEeccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~ 349 (666)
.+.+|||||||+|.++..+... .|+++|+++.++..++. ++...|+...+...|...- .+.+.||+|+++-+++
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~-~l~~~g~~~~~~v~D~~~~-~p~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDE-ALTRLNVPHRTNVADLLED-RLDEPADVTLLLKTLP 209 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHH-HHHHTTCCEEEEECCTTTS-CCCSCCSEEEETTCHH
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHH-HHHhcCCCceEEEeeeccc-CCCCCcchHHHHHHHH
Confidence 3679999999999998888654 89999999999987764 4445577766665553332 3468899999888766
Q ss_pred ccccChHHHHHHHHHhccCCeEEEEE
Q 005981 350 NWTRDDGILLLEVNRMLRAGGYFAWA 375 (666)
Q Consensus 350 h~~~d~~~~L~el~RvLkPGG~lv~s 375 (666)
++.......+.++.+.|+++|.++--
T Consensus 210 ~Le~q~kg~g~~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 210 CLETQQRGSGWEVIDIVNSPNIVVTF 235 (281)
T ss_dssp HHHHHSTTHHHHHHHHSSCSEEEEEE
T ss_pred HhhhhhhHHHHHHHHHhCCCCEEEec
Confidence 66332233444999999999998654
No 349
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.58 E-value=8.7e-08 Score=96.52 Aligned_cols=97 Identities=7% Similarity=0.024 Sum_probs=69.9
Q ss_pred CCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHcCCCc--eEEeecccC-CC-C-----CCCCee
Q 005981 275 IRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAPA--MVAAFATRR-LP-Y-----PSQAFD 340 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~rg~~~--~~~~~d~e~-Lp-f-----~d~sFD 340 (666)
.++|||||||+|..+..++. .+|+++|+++.++..++..+ .+.++.. .+...+... ++ + +.++||
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFI-RKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHH-HHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 47999999999988877763 38999999999888776544 3455532 333334322 22 1 257899
Q ss_pred EEEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 341 LIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 341 lVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
+|++.. +..+...++.++.++|||||++++..
T Consensus 150 ~I~~d~----~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 150 FGFVDA----DKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEECS----CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECC----chHHHHHHHHHHHHhcCCCeEEEEec
Confidence 999653 23445789999999999999999874
No 350
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.58 E-value=1.6e-07 Score=95.56 Aligned_cols=120 Identities=12% Similarity=0.136 Sum_probs=87.0
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCCCCC-C-CCccceEEec
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEPFDT-Y-PRTYDLLHAA 589 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~~~~-y-p~tyDliha~ 589 (666)
..|||+|||.|.++..|++++. . +|+.+|. +.+++.+.++ |+ +.+++...+.+.. + +.+||+|.++
T Consensus 51 ~~vLDlG~G~G~~~~~la~~~~--~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~n 126 (259)
T 3lpm_A 51 GKIIDLCSGNGIIPLLLSTRTK--A--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCN 126 (259)
T ss_dssp CEEEETTCTTTHHHHHHHTTCC--C--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEEC
T ss_pred CEEEEcCCchhHHHHHHHHhcC--C--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEEC
Confidence 4699999999999999999853 1 6777774 5666666553 54 5555544444332 4 3899999997
Q ss_pred cccccC-----------------CCCCCHHHHHHHhhhcccCCeEEEEEeChhHHHHHHHHHHhcCcEEEE
Q 005981 590 GLFSVE-----------------SKRCNMSTIMLEMDRMLRPGGHVYIRDSIDVMDELQEIGKAMGWHVTL 643 (666)
Q Consensus 590 ~~f~~~-----------------~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~~~~~~~~i~~~l~W~~~~ 643 (666)
--|... ...+.++.++.++.|+|||||++++--..+....+...++...|....
T Consensus 127 pPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 127 PPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp CCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEEE
T ss_pred CCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceEE
Confidence 554322 112456789999999999999999987777888888889988888653
No 351
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.58 E-value=9.5e-08 Score=111.27 Aligned_cols=102 Identities=17% Similarity=0.147 Sum_probs=75.0
Q ss_pred CCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCC---ceEEeecccC-CCCCCCCeeEEEeccc
Q 005981 275 IRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAP---AMVAAFATRR-LPYPSQAFDLIHCSRC 347 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~---~~~~~~d~e~-Lpf~d~sFDlVv~s~~ 347 (666)
+.+|||+|||+|.++..++.. +|+++|+|+.++..++.+. ...++. ..+...|+.. ++...++||+|++...
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~-~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNL-RLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHH-HHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHH-HHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 479999999999999887754 6999999999998887544 445654 3444455433 3444578999998543
Q ss_pred cc----------ccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 348 RI----------NWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 348 l~----------h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.+ +...+...++.++.++|+|||++++++.
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 22 2223345789999999999999999975
No 352
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.58 E-value=2.5e-07 Score=99.29 Aligned_cols=136 Identities=15% Similarity=0.234 Sum_probs=93.9
Q ss_pred CCceeeEeeccccchHHHHHHhhC--CCceEEEEeeccCCCCChhHHHh----ccc---cccc-cccCCCCCCCCCccce
Q 005981 516 KMKLRNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSGFNTLPVIYD----RGL---IGVM-HDWCEPFDTYPRTYDL 585 (666)
Q Consensus 516 ~~~iRnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~~~~l~~~~e----rGl---ig~~-~~~ce~~~~yp~tyDl 585 (666)
......|||+|||.|.++.+|+++ ++ .++.+|.+.+++.+.+ .|+ |.+. +|.. ..+|..||+
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~-----~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~---~~~p~~~D~ 271 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFPGL-----RGTLLERPPVAEEARELLTGRGLADRCEILPGDFF---ETIPDGADV 271 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTC-----EEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTT---TCCCSSCSE
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCCCC-----eEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCC---CCCCCCceE
Confidence 445678999999999999999987 33 2333444455555544 354 4444 4443 345668999
Q ss_pred EEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh------------------------hHHHHHHHHHHhcCcEE
Q 005981 586 LHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI------------------------DVMDELQEIGKAMGWHV 641 (666)
Q Consensus 586 iha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~------------------------~~~~~~~~i~~~l~W~~ 641 (666)
|.+..++.++.+. ....+|.++.|+|||||+++|.|.. ...++++++++.-.|+.
T Consensus 272 v~~~~vlh~~~d~-~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~ 350 (369)
T 3gwz_A 272 YLIKHVLHDWDDD-DVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRV 350 (369)
T ss_dssp EEEESCGGGSCHH-HHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEE
T ss_pred EEhhhhhccCCHH-HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeE
Confidence 9999999777642 1247999999999999999996421 11466888999999997
Q ss_pred EEEeccCCCCCceEEEEEEeC
Q 005981 642 TLRETAEGPHASYRILTADKR 662 (666)
Q Consensus 642 ~~~~~~~~~~~~e~~l~~~k~ 662 (666)
...... ......++.|+|.
T Consensus 351 ~~~~~~--~~~~~svie~~~a 369 (369)
T 3gwz_A 351 ERSLPC--GAGPVRIVEIRRA 369 (369)
T ss_dssp EEEEEC--SSSSEEEEEEEEC
T ss_pred EEEEEC--CCCCcEEEEEEeC
Confidence 655431 1235678888873
No 353
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.58 E-value=1.3e-07 Score=95.24 Aligned_cols=107 Identities=15% Similarity=0.075 Sum_probs=75.6
Q ss_pred HHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCc--eEEeecc-cC
Q 005981 259 LDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPA--MVAAFAT-RR 331 (666)
Q Consensus 259 i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~--~~~~~d~-e~ 331 (666)
++.+.++++ ++.+|||||||+|.++..++.. +|+++|+++.++..|+. .+...++.. .+...|. +.
T Consensus 6 L~~l~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~-N~~~~gl~~~i~~~~~d~l~~ 78 (225)
T 3kr9_A 6 LELVASFVS------QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVK-NVEAHGLKEKIQVRLANGLAA 78 (225)
T ss_dssp HHHHHTTSC------TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHH-HHHHTTCTTTEEEEECSGGGG
T ss_pred HHHHHHhCC------CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEEECchhhh
Confidence 455555554 3368999999999999988875 79999999999988874 455566643 3333342 44
Q ss_pred CCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 332 LPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 332 Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
++. ...||+|+.+++.- .-...++.+..+.|+++|+|+++.
T Consensus 79 l~~-~~~~D~IviaG~Gg---~~i~~Il~~~~~~L~~~~~lVlq~ 119 (225)
T 3kr9_A 79 FEE-TDQVSVITIAGMGG---RLIARILEEGLGKLANVERLILQP 119 (225)
T ss_dssp CCG-GGCCCEEEEEEECH---HHHHHHHHHTGGGCTTCCEEEEEE
T ss_pred ccc-CcCCCEEEEcCCCh---HHHHHHHHHHHHHhCCCCEEEEEC
Confidence 432 12699998654311 113578889999999999999985
No 354
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.58 E-value=6.7e-08 Score=99.83 Aligned_cols=111 Identities=14% Similarity=0.195 Sum_probs=83.6
Q ss_pred eEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCCCCCCCCccceEEecccc
Q 005981 521 NVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEPFDTYPRTYDLLHAAGLF 592 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~~~~yp~tyDliha~~~f 592 (666)
.|||+|||+|+|+.+|++.+.. .|+.+|. +.+++.+.++ |+ +.+.+..++.+.. +.+||+|.++..
T Consensus 128 ~VLDlgcG~G~~~~~la~~~~~----~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p- 201 (278)
T 2frn_A 128 LVVDMFAGIGHLSLPIAVYGKA----KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV- 201 (278)
T ss_dssp EEEETTCTTTTTHHHHHHHTCC----EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-
T ss_pred EEEEecccCCHHHHHHHHhCCC----EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc-
Confidence 5999999999999999998763 4666774 5677666553 55 3345555544443 689999998633
Q ss_pred ccCCCCCCHHHHHHHhhhcccCCeEEEEEeC-------hhHHHHHHHHHHhcCcEEEE
Q 005981 593 SVESKRCNMSTIMLEMDRMLRPGGHVYIRDS-------IDVMDELQEIGKAMGWHVTL 643 (666)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~-------~~~~~~~~~i~~~l~W~~~~ 643 (666)
.....++.++.|+|||||++++.+. .+..+.+.+.++..+|++..
T Consensus 202 ------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 ------VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ------SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred ------hhHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 2235789999999999999999643 24578889999999999876
No 355
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.58 E-value=1.4e-07 Score=96.17 Aligned_cols=109 Identities=15% Similarity=0.047 Sum_probs=77.1
Q ss_pred HHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCc--eEEeecccC
Q 005981 258 YLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPA--MVAAFATRR 331 (666)
Q Consensus 258 ~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~--~~~~~d~e~ 331 (666)
.++.+.+.++ ++.+|||||||+|.++..|+.. +|+++|+++.++..|+.+ +...++.. .+...|...
T Consensus 11 RL~~i~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N-~~~~gl~~~I~v~~gD~l~ 83 (244)
T 3gnl_A 11 RLEKVASYIT------KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQ-VRSSGLTEQIDVRKGNGLA 83 (244)
T ss_dssp HHHHHHTTCC------SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHH-HHHTTCTTTEEEEECSGGG
T ss_pred HHHHHHHhCC------CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCceEEEEecchhh
Confidence 3556666665 3368999999999999998875 699999999999888754 45566643 344444333
Q ss_pred CCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 332 LPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 332 Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
...++..||+|+..+..- .-...+|.+..+.|+++|+|+++.
T Consensus 84 ~~~~~~~~D~IviagmGg---~lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 84 VIEKKDAIDTIVIAGMGG---TLIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp GCCGGGCCCEEEEEEECH---HHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred ccCccccccEEEEeCCch---HHHHHHHHHHHHHhCCCCEEEEEc
Confidence 333334699988644311 123478888999999999999995
No 356
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.57 E-value=2.5e-07 Score=98.27 Aligned_cols=94 Identities=12% Similarity=0.076 Sum_probs=71.1
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCCCCCCCCeeEEEeccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSRCRI 349 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~Lpf~d~sFDlVv~s~~l~ 349 (666)
.+.+|||+|||+|.++.. +.. +|+++|+++.++..++. .+...++. ..+...|...+. ++||+|++...
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~-n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP-- 267 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKK-NIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP-- 267 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT--
T ss_pred CCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc--
Confidence 347999999999999988 755 89999999999988774 44445552 345555655554 78999997532
Q ss_pred ccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 350 NWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 350 h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.....++.++.++|+|||.+++.+.
T Consensus 268 ---~~~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 268 ---KFAHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp ---TTGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred ---HhHHHHHHHHHHHcCCCCEEEEEEe
Confidence 1234789999999999999998754
No 357
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.57 E-value=2.4e-08 Score=102.28 Aligned_cols=100 Identities=17% Similarity=0.118 Sum_probs=72.2
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCCCCC-CCCccceEEecc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEPFDT-YPRTYDLLHAAG 590 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~~~~-yp~tyDliha~~ 590 (666)
..|||+|||.|.++.+|++.|. .+|+.+|. +.++..+.++ |+ +.+.+.-++..+. -+.+||+|.|..
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGI----GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTC----SEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CeEEEECCCCCHHHHHHHHCCC----CEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 4699999999999999988764 14566663 5677777665 33 4455544444433 248999999998
Q ss_pred ccccC-CCCCCHHHHHHHhhhcccCCeEEEEEeC
Q 005981 591 LFSVE-SKRCNMSTIMLEMDRMLRPGGHVYIRDS 623 (666)
Q Consensus 591 ~f~~~-~~~c~~~~~l~E~dRiLRPgG~~ii~d~ 623 (666)
++.+. .+.-+...+|.++.|+|||||++++...
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 87552 2233457899999999999999999853
No 358
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.56 E-value=3.2e-07 Score=97.53 Aligned_cols=135 Identities=16% Similarity=0.185 Sum_probs=87.4
Q ss_pred CCceeeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCChh--HHHhccc---cccc-cccCCCCCCCCCccceEEec
Q 005981 516 KMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTLP--VIYDRGL---IGVM-HDWCEPFDTYPRTYDLLHAA 589 (666)
Q Consensus 516 ~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l~--~~~erGl---ig~~-~~~ce~~~~yp~tyDliha~ 589 (666)
......|||+|||.|.++.+|+++.-++ .++.+|.+..+. .+.+.|+ +.+. +|.. ...| +||+|.+.
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~---~~~p-~~D~v~~~ 254 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGL---QGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFL---REVP-HADVHVLK 254 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTE---EEEEEECHHHHTTCCCCCGGGTTSEEEEECCTT---TCCC-CCSEEEEE
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCC---EEEEecCHHHhhcccccccCCCCCeEEEecCCC---CCCC-CCcEEEEe
Confidence 3456789999999999999998862222 223333221111 0111233 3333 3442 4456 99999999
Q ss_pred cccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh-------------------------hHHHHHHHHHHhcCcEEEEE
Q 005981 590 GLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI-------------------------DVMDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 590 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~-------------------------~~~~~~~~i~~~l~W~~~~~ 644 (666)
.++.++.+. ....+|.++.|+|||||+++|.|.. ...++++++++.-.++....
T Consensus 255 ~vlh~~~d~-~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 333 (348)
T 3lst_A 255 RILHNWGDE-DSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRV 333 (348)
T ss_dssp SCGGGSCHH-HHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred hhccCCCHH-HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 999887653 2258999999999999999997531 02467888899999987655
Q ss_pred eccCCCCCceEEEEEEe
Q 005981 645 ETAEGPHASYRILTADK 661 (666)
Q Consensus 645 ~~~~~~~~~e~~l~~~k 661 (666)
.... ....++.++|
T Consensus 334 ~~~~---~~~~vie~~p 347 (348)
T 3lst_A 334 VGTS---SVMSIAVGVP 347 (348)
T ss_dssp EECS---SSCEEEEEEE
T ss_pred EECC---CCcEEEEEEe
Confidence 4422 2355666655
No 359
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.55 E-value=8.9e-08 Score=94.16 Aligned_cols=116 Identities=20% Similarity=0.216 Sum_probs=77.5
Q ss_pred eeEeeccccchHHHHHHhhC--CCceEEEEeeccCC-CCChhHHH--------hccc--cccccccCCCCCCCCCccceE
Q 005981 520 RNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIY--------DRGL--IGVMHDWCEPFDTYPRTYDLL 586 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~--------erGl--ig~~~~~ce~~~~yp~tyDli 586 (666)
..|||+|||+|.++.+|+++ +. +|+.+|. +.++..+. .+|+ +.+.+...+.++..+.+ |.+
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~~-----~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v 102 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPSR-----LVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GEL 102 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTTE-----EEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEE
T ss_pred CEEEEecCCCCHHHHHHHHHCCCC-----EEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEE
Confidence 35999999999999999998 44 5666763 56776432 2454 45556665665543355 777
Q ss_pred Eeccccc-----cCCCCCCHHHHHHHhhhcccCCeEEEEEeC------------------hh-HHHHHHHHHHhcCcEEE
Q 005981 587 HAAGLFS-----VESKRCNMSTIMLEMDRMLRPGGHVYIRDS------------------ID-VMDELQEIGKAMGWHVT 642 (666)
Q Consensus 587 ha~~~f~-----~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~------------------~~-~~~~~~~i~~~l~W~~~ 642 (666)
+..-.+. +..+. ..+|.|+.|+|||||.++++.. .+ ..+.+++++..-.|++.
T Consensus 103 ~~~~~~~~~~~~~~~~~---~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~ 179 (218)
T 3mq2_A 103 HVLMPWGSLLRGVLGSS---PEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLA 179 (218)
T ss_dssp EEESCCHHHHHHHHTSS---SHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEE
T ss_pred EEEccchhhhhhhhccH---HHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCce
Confidence 7321111 11111 5899999999999999999621 11 23458888999999876
Q ss_pred EE
Q 005981 643 LR 644 (666)
Q Consensus 643 ~~ 644 (666)
..
T Consensus 180 ~~ 181 (218)
T 3mq2_A 180 DC 181 (218)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 360
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.55 E-value=1.8e-07 Score=97.93 Aligned_cols=87 Identities=22% Similarity=0.291 Sum_probs=59.7
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccCCC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRRLP 333 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~Lp 333 (666)
.+++.+.+.+.. ....+|||||||+|.++..|+++ +|+|+|+++.++..++.+.. ..+.. ..+...|+..++
T Consensus 29 ~i~~~i~~~~~~----~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~-~~~~~~v~~~~~D~~~~~ 103 (299)
T 2h1r_A 29 GILDKIIYAAKI----KSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCL-YEGYNNLEVYEGDAIKTV 103 (299)
T ss_dssp HHHHHHHHHHCC----CTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHH-HTTCCCEEC----CCSSC
T ss_pred HHHHHHHHhcCC----CCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHH-HcCCCceEEEECchhhCC
Confidence 345666665542 34579999999999999999986 89999999999987765443 33433 334445666666
Q ss_pred CCCCCeeEEEeccccccc
Q 005981 334 YPSQAFDLIHCSRCRINW 351 (666)
Q Consensus 334 f~d~sFDlVv~s~~l~h~ 351 (666)
+ .+||+|+++.. .++
T Consensus 104 ~--~~~D~Vv~n~p-y~~ 118 (299)
T 2h1r_A 104 F--PKFDVCTANIP-YKI 118 (299)
T ss_dssp C--CCCSEEEEECC-GGG
T ss_pred c--ccCCEEEEcCC-ccc
Confidence 5 48999997644 555
No 361
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.55 E-value=1.9e-07 Score=99.64 Aligned_cols=138 Identities=24% Similarity=0.304 Sum_probs=91.2
Q ss_pred ceeeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCChhHHHh----ccc---cccc-cccCCCCCCCCCccceEEec
Q 005981 518 KLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTLPVIYD----RGL---IGVM-HDWCEPFDTYPRTYDLLHAA 589 (666)
Q Consensus 518 ~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l~~~~e----rGl---ig~~-~~~ce~~~~yp~tyDliha~ 589 (666)
.-..|||+|||.|.++.+|++..-++ .++.+|.+.+++.+.+ .|+ +.+. +|..+ ..|..||+|.+.
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~D~v~~~ 255 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHL---RGTLVELAGPAERARRRFADAGLADRVTVAEGDFFK---PLPVTADVVLLS 255 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTC---EEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTS---CCSCCEEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCC---EEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCC---cCCCCCCEEEEe
Confidence 44679999999999999999872111 3333443456665554 343 3333 34433 356569999999
Q ss_pred cccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC--h--h-----------------------HHHHHHHHHHhcCcEEE
Q 005981 590 GLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS--I--D-----------------------VMDELQEIGKAMGWHVT 642 (666)
Q Consensus 590 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~--~--~-----------------------~~~~~~~i~~~l~W~~~ 642 (666)
.++.+..+. ....+|.++.|+|||||+++|.|. . + ..+.++++++.-.++..
T Consensus 256 ~vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~ 334 (374)
T 1qzz_A 256 FVLLNWSDE-DALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALA 334 (374)
T ss_dssp SCGGGSCHH-HHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEE
T ss_pred ccccCCCHH-HHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceE
Confidence 998876542 224899999999999999999876 2 1 24567788888899865
Q ss_pred EEeccCCCC--CceEEEEEEeC
Q 005981 643 LRETAEGPH--ASYRILTADKR 662 (666)
Q Consensus 643 ~~~~~~~~~--~~e~~l~~~k~ 662 (666)
....-.+.. ....++.++|.
T Consensus 335 ~~~~~~~~~~~~~~~~i~~~~~ 356 (374)
T 1qzz_A 335 SERTSGSTTLPFDFSILEFTAV 356 (374)
T ss_dssp EEEEECCSSCSSCEEEEEEEEC
T ss_pred EEEECCCCcccCCcEEEEEEEC
Confidence 443222211 12278888874
No 362
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.54 E-value=2.2e-07 Score=96.50 Aligned_cols=117 Identities=12% Similarity=0.069 Sum_probs=82.2
Q ss_pred CCccccccHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcCCCc-
Q 005981 247 GGTQFIHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERGAPA- 322 (666)
Q Consensus 247 ggt~F~~g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg~~~- 322 (666)
..++|..+...-..++.+.+. ++.+|||+|||+|.++..++.+ +|+++|+++..+..++. .++.+++..
T Consensus 104 ~k~~f~~~~~~er~ri~~~~~------~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~-N~~~N~v~~~ 176 (278)
T 3k6r_A 104 AKIMFSPANVKERVRMAKVAK------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVE-NIHLNKVEDR 176 (278)
T ss_dssp TTSCCCGGGHHHHHHHHHHCC------TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHH-HHHHTTCTTT
T ss_pred cceEEcCCcHHHHHHHHHhcC------CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHH-HHHHcCCCCc
Confidence 344555555444556666654 3589999999999988877643 89999999988877664 555566654
Q ss_pred -eEEeecccCCCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 323 -MVAAFATRRLPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 323 -~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
.+...|...++ ..+.||.|+++.. .....++..+.++||+||.+.+.+
T Consensus 177 v~~~~~D~~~~~-~~~~~D~Vi~~~p-----~~~~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 177 MSAYNMDNRDFP-GENIADRILMGYV-----VRTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp EEEECSCTTTCC-CCSCEEEEEECCC-----SSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeCcHHHhc-cccCCCEEEECCC-----CcHHHHHHHHHHHcCCCCEEEEEe
Confidence 33444555554 3578999986532 334567888899999999987754
No 363
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.54 E-value=1.9e-07 Score=94.86 Aligned_cols=101 Identities=19% Similarity=0.173 Sum_probs=68.0
Q ss_pred hcccCCCceeeEeeccccchHHHHHHhhC-C--CceEEEEeeccCC-C------CChhHHHhc----cc---ccccccc-
Q 005981 511 ALHWKKMKLRNVLDMRAGFGGFAAALIEQ-K--FDCWVMNVVPVSG-F------NTLPVIYDR----GL---IGVMHDW- 572 (666)
Q Consensus 511 ~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~-~--~~vwvmnv~~~~~-~------~~l~~~~er----Gl---ig~~~~~- 572 (666)
.+++..+ ..|||+|||.|.++..|+++ | . +|+.+|. + .+++.+.++ |+ +.+.+..
T Consensus 38 ~~~~~~~--~~vLDiGcG~G~~~~~l~~~~g~~~-----~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 110 (275)
T 3bkx_A 38 AWQVKPG--EKILEIGCGQGDLSAVLADQVGSSG-----HVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTN 110 (275)
T ss_dssp HHTCCTT--CEEEEESCTTSHHHHHHHHHHCTTC-----EEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCC
T ss_pred HcCCCCC--CEEEEeCCCCCHHHHHHHHHhCCCC-----EEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECCh
Confidence 3445444 36999999999999999987 3 4 4555553 2 378777665 33 3333322
Q ss_pred --CCCCCCCC-CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 573 --CEPFDTYP-RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 573 --ce~~~~yp-~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
.+.. .++ .+||+|++.+++.+..+. ..++..+.++|+|||++++.+
T Consensus 111 ~~~~~~-~~~~~~fD~v~~~~~l~~~~~~---~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 111 LSDDLG-PIADQHFDRVVLAHSLWYFASA---NALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp TTTCCG-GGTTCCCSEEEEESCGGGSSCH---HHHHHHHHHHTTTCSEEEEEE
T ss_pred hhhccC-CCCCCCEEEEEEccchhhCCCH---HHHHHHHHHHhCCCCEEEEEE
Confidence 1122 233 899999999999887654 455666667777799999964
No 364
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.54 E-value=2e-07 Score=99.40 Aligned_cols=96 Identities=18% Similarity=0.182 Sum_probs=70.7
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCChhHHHhc----cc---cccccccCCCCCCCCCccceEEecccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTLPVIYDR----GL---IGVMHDWCEPFDTYPRTYDLLHAAGLF 592 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l~~~~er----Gl---ig~~~~~ce~~~~yp~tyDliha~~~f 592 (666)
..|||+|||.|.++..+++.|. ..|+.+|...++..+.++ |+ +.+.+.-.+.++ .|..||+|.+..++
T Consensus 52 ~~VLDiGcGtG~ls~~la~~g~----~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~~D~Ivs~~~~ 126 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQAGA----RKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS-LPEQVDIIISEPMG 126 (348)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC----SEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSCEEEEEECCCB
T ss_pred CEEEEcCCCccHHHHHHHhCCC----CEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCC-CCCceeEEEEeCch
Confidence 3699999999999999998864 145555543466555443 55 556655555443 46889999999887
Q ss_pred ccCCCCCCHHHHHHHhhhcccCCeEEEEE
Q 005981 593 SVESKRCNMSTIMLEMDRMLRPGGHVYIR 621 (666)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRPgG~~ii~ 621 (666)
.+... -.+...+.++.|+|||||.+++.
T Consensus 127 ~~~~~-~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 127 YMLFN-ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TTBTT-TSHHHHHHHGGGGEEEEEEEESC
T ss_pred hcCCh-HHHHHHHHHHHhhcCCCeEEEEe
Confidence 77654 34678889999999999999974
No 365
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.53 E-value=1.8e-07 Score=98.90 Aligned_cols=95 Identities=19% Similarity=0.234 Sum_probs=71.2
Q ss_pred eEeeccccchHHHHHHhhCCCceEEEEeeccCCCCChhHHHhc----cc---cccccccCCCCCCCC-CccceEEecccc
Q 005981 521 NVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTLPVIYDR----GL---IGVMHDWCEPFDTYP-RTYDLLHAAGLF 592 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l~~~~er----Gl---ig~~~~~ce~~~~yp-~tyDliha~~~f 592 (666)
.|||+|||.|.++..+++.|. ..|+.+|...++..+.++ |+ |.+.+...+.++ +| ..||+|.|..+.
T Consensus 41 ~VLDiGcGtG~ls~~la~~g~----~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 41 IVLDVGCGTGILSMFAAKHGA----KHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVH-LPFPKVDIIISEWMG 115 (328)
T ss_dssp EEEEETCTTSHHHHHHHHTCC----SEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSSSCEEEEEECCCB
T ss_pred EEEEecCccHHHHHHHHHCCC----CEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhcc-CCCCcccEEEEeCch
Confidence 699999999999999999864 145556543466665543 55 556666655554 45 899999998665
Q ss_pred ccCCCCCCHHHHHHHhhhcccCCeEEEE
Q 005981 593 SVESKRCNMSTIMLEMDRMLRPGGHVYI 620 (666)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRPgG~~ii 620 (666)
....+.-.++.++.+++|+|||||.+++
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 5555555678999999999999999984
No 366
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.53 E-value=2e-07 Score=99.14 Aligned_cols=95 Identities=20% Similarity=0.240 Sum_probs=68.5
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCChhHHHhc----cc---cccccccCCCCCCCC-CccceEEeccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTLPVIYDR----GL---IGVMHDWCEPFDTYP-RTYDLLHAAGL 591 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l~~~~er----Gl---ig~~~~~ce~~~~yp-~tyDliha~~~ 591 (666)
..|||+|||+|.++..|++.|. -.|+.+|...+++.+.++ |+ |.+.+...+.++ +| .+||+|.+..+
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~----~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGA----KKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH-LPVEKVDVIISEWM 140 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC----SEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSCSCEEEEEECCC
T ss_pred CEEEEeeccCcHHHHHHHHcCC----CEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhc-CCCCcEEEEEEcCc
Confidence 3699999999999999999864 145555543466666553 44 556666655553 45 89999999864
Q ss_pred cccCCCCCCHHHHHHHhhhcccCCeEEE
Q 005981 592 FSVESKRCNMSTIMLEMDRMLRPGGHVY 619 (666)
Q Consensus 592 f~~~~~~c~~~~~l~E~dRiLRPgG~~i 619 (666)
.....+.-.+..+|.++.|+|||||.++
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 3333333456789999999999999998
No 367
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.53 E-value=8.3e-08 Score=102.50 Aligned_cols=97 Identities=15% Similarity=0.214 Sum_probs=73.4
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCChhHHHh----ccc---cccccccCCCCCCCC-CccceEEeccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTLPVIYD----RGL---IGVMHDWCEPFDTYP-RTYDLLHAAGL 591 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l~~~~e----rGl---ig~~~~~ce~~~~yp-~tyDliha~~~ 591 (666)
.+|||+|||.|.++..|++.|. ..|+.+|...++..+.+ .|+ |.+.+...+.++ +| .+||+|.+..+
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~----~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGA----RKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE-LPVEKVDIIISEWM 142 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTC----SEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSSCEEEEEECCC
T ss_pred CEEEEEeccchHHHHHHHHCCC----CEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHcc-CCCCceEEEEEccc
Confidence 4599999999999999999864 14555664346665554 455 566666666663 56 89999999876
Q ss_pred cccCCCCCCHHHHHHHhhhcccCCeEEEEE
Q 005981 592 FSVESKRCNMSTIMLEMDRMLRPGGHVYIR 621 (666)
Q Consensus 592 f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~ 621 (666)
.........++.++.+++|+|||||.+|+.
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 555555567789999999999999999764
No 368
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.53 E-value=4.6e-08 Score=98.11 Aligned_cols=122 Identities=13% Similarity=0.096 Sum_probs=73.1
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC--CCChhHH---Hh----ccc--cccccccCCCCCC-CCCccceEE
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG--FNTLPVI---YD----RGL--IGVMHDWCEPFDT-YPRTYDLLH 587 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~--~~~l~~~---~e----rGl--ig~~~~~ce~~~~-yp~tyDlih 587 (666)
..|||+|||.|.++.+|+++... .+|+.+|. +.+++.| .+ +|+ +.+.+.-.+.++. +...+|.++
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~---~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQN---TFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTT---EEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCC---CEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 45999999999999999954111 26777773 4666665 33 355 4445555555532 124455555
Q ss_pred ecccccc--CCCCCCHHHHHHHhhhcccCCeEEEEE----eC---h------------hH-H-HHHHHHHHhcCcEEEEE
Q 005981 588 AAGLFSV--ESKRCNMSTIMLEMDRMLRPGGHVYIR----DS---I------------DV-M-DELQEIGKAMGWHVTLR 644 (666)
Q Consensus 588 a~~~f~~--~~~~c~~~~~l~E~dRiLRPgG~~ii~----d~---~------------~~-~-~~~~~i~~~l~W~~~~~ 644 (666)
+...+.. ...+-....+|.|+.|+|||||.++|. +. . +. . +.+.+.+.+-.|++...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~ 182 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDV 182 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeee
Confidence 4321111 111112357899999999999999991 11 0 11 1 12777888888987543
No 369
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.53 E-value=1.2e-07 Score=95.74 Aligned_cols=112 Identities=16% Similarity=0.146 Sum_probs=73.7
Q ss_pred eeEeeccccchHHHHHHhhC------CCceEEEEeeccCC-CCChhHHHhc-cccccccccCCCC---CCCC-CccceEE
Q 005981 520 RNVLDMRAGFGGFAAALIEQ------KFDCWVMNVVPVSG-FNTLPVIYDR-GLIGVMHDWCEPF---DTYP-RTYDLLH 587 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~------~~~vwvmnv~~~~~-~~~l~~~~er-Glig~~~~~ce~~---~~yp-~tyDlih 587 (666)
.+|||+|||+|+.++.|++. +. .|+.+|. +.+++.+... .-|.+.+...+.+ +..+ .+||+|+
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~-----~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~ 157 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDC-----QVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIF 157 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCC-----EEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCC-----EEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEE
Confidence 46999999999999999875 44 3444542 4444444321 1144444443332 2223 3799999
Q ss_pred eccccccCCCCCCHHHHHHHhhh-cccCCeEEEEEeCh-----hHHHHHHHHHHhc--CcEEE
Q 005981 588 AAGLFSVESKRCNMSTIMLEMDR-MLRPGGHVYIRDSI-----DVMDELQEIGKAM--GWHVT 642 (666)
Q Consensus 588 a~~~f~~~~~~c~~~~~l~E~dR-iLRPgG~~ii~d~~-----~~~~~~~~i~~~l--~W~~~ 642 (666)
+... + .++..+|.|+.| +|||||++++.|.. .....+.++++.. ++++.
T Consensus 158 ~d~~--~----~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 158 IDNA--H----ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp EESS--C----SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEE
T ss_pred ECCc--h----HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEc
Confidence 8753 2 256899999998 99999999998732 1234778888887 56653
No 370
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.53 E-value=1.8e-07 Score=104.19 Aligned_cols=103 Identities=18% Similarity=0.263 Sum_probs=72.7
Q ss_pred CCCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCCCc-eEEeecccCCCC-CCCCeeEEEec-
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAPA-MVAAFATRRLPY-PSQAFDLIHCS- 345 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~~-~~~~~d~e~Lpf-~d~sFDlVv~s- 345 (666)
++.+|||+|||+|..+..|++. .|+++|+++.++..++.+. ...|+.. .+...|...++. .+++||.|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~-~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANI-SRCGISNVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHH-HHHTCCSEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCcEEEEeCCHHHhhhhccccCCEEEECC
Confidence 4579999999999988877752 7999999999988776544 3445543 344456655543 45789999972
Q ss_pred ---cc-cc--------ccccC--------hHHHHHHHHHhccCCeEEEEEEC
Q 005981 346 ---RC-RI--------NWTRD--------DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 346 ---~~-l~--------h~~~d--------~~~~L~el~RvLkPGG~lv~st~ 377 (666)
.. .+ +|..+ ...+|.++.++|||||.++++|.
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 11 11 12110 13678999999999999999975
No 371
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.53 E-value=2.4e-07 Score=93.90 Aligned_cols=131 Identities=12% Similarity=0.133 Sum_probs=83.4
Q ss_pred eeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccC-CCCCCCC--Cccce
Q 005981 520 RNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWC-EPFDTYP--RTYDL 585 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~c-e~~~~yp--~tyDl 585 (666)
++|||+|||.|.++.+|++. +. .|+.+|. +.+++.+.++ |+ |.+...-. +.++..+ .+||+
T Consensus 65 ~~VLdiG~G~G~~~~~la~~~~~~~-----~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMARELPADG-----QLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTC-----EEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred CEEEEecCCchHHHHHHHHhCCCCC-----EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence 57999999999999999987 44 4566663 5667666654 54 34443322 2233333 49999
Q ss_pred EEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeChh------------HHHHHHHH----HHhcCcEEEEEeccCC
Q 005981 586 LHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSID------------VMDELQEI----GKAMGWHVTLRETAEG 649 (666)
Q Consensus 586 iha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~------------~~~~~~~i----~~~l~W~~~~~~~~~~ 649 (666)
|.++.. .-....++.++-|+|||||++++.|..- ....++++ .+.-+|+......- |
T Consensus 140 V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~-g 212 (248)
T 3tfw_A 140 IFIDAD------KPNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTV-G 212 (248)
T ss_dssp EEECSC------GGGHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEC-S
T ss_pred EEECCc------hHHHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecC-C
Confidence 998631 2234689999999999999999974321 22333443 34446766654221 2
Q ss_pred CCCceEEEEEEeC
Q 005981 650 PHASYRILTADKR 662 (666)
Q Consensus 650 ~~~~e~~l~~~k~ 662 (666)
......+.+++|+
T Consensus 213 ~~~~DG~~i~~~~ 225 (248)
T 3tfw_A 213 TKGWDGFTLAWVN 225 (248)
T ss_dssp TTCSEEEEEEEEC
T ss_pred CCCCCeeEEEEEe
Confidence 1234678888874
No 372
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.52 E-value=2.2e-07 Score=90.72 Aligned_cols=133 Identities=14% Similarity=0.111 Sum_probs=76.6
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCChhHHHhccccccccccCCCCCC-------CC----CccceEEe
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTLPVIYDRGLIGVMHDWCEPFDT-------YP----RTYDLLHA 588 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l~~~~erGlig~~~~~ce~~~~-------yp----~tyDliha 588 (666)
.+|||+|||+|+++.+|++++..|+.+.+.|.... .++--+..|..+ ..+ ++ .+||+|.|
T Consensus 27 ~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~~--------~~v~~~~~D~~~-~~~~~~~~~~~~~~~~~~~D~Vls 97 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEEI--------AGVRFIRCDIFK-ETIFDDIDRALREEGIEKVDDVVS 97 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCCC--------TTCEEEECCTTS-SSHHHHHHHHHHHHTCSSEEEEEE
T ss_pred CEEEEEeecCCHHHHHHHHcCCcEEEEeccccccC--------CCeEEEEccccC-HHHHHHHHHHhhcccCCcceEEec
Confidence 46999999999999999998664555444443210 133212233221 111 11 48999999
Q ss_pred ccccccCCCC--------CCHHHHHHHhhhcccCCeEEEEEe-ChhHHHHHHHHHHhcCcEEEEEec-cCCCCCceEEEE
Q 005981 589 AGLFSVESKR--------CNMSTIMLEMDRMLRPGGHVYIRD-SIDVMDELQEIGKAMGWHVTLRET-AEGPHASYRILT 658 (666)
Q Consensus 589 ~~~f~~~~~~--------c~~~~~l~E~dRiLRPgG~~ii~d-~~~~~~~~~~i~~~l~W~~~~~~~-~~~~~~~e~~l~ 658 (666)
+......... ...+.+|.++.|+|||||.|++.- ..+....+...++..==++.+... ..-+..+|..+|
T Consensus 98 d~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~F~~v~~~kP~asR~~s~E~y~v 177 (191)
T 3dou_A 98 DAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKNFSSYKISKPPASRGSSSEIYIM 177 (191)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGGEEEEEEECC------CCEEEEE
T ss_pred CCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHhcCEEEEECCCCccCCCceEEEE
Confidence 7543322211 112478899999999999999863 222334555555553222333322 223367899999
Q ss_pred EEe
Q 005981 659 ADK 661 (666)
Q Consensus 659 ~~k 661 (666)
|++
T Consensus 178 ~~~ 180 (191)
T 3dou_A 178 FFG 180 (191)
T ss_dssp EEE
T ss_pred Eee
Confidence 986
No 373
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.52 E-value=9.2e-08 Score=106.11 Aligned_cols=103 Identities=20% Similarity=0.238 Sum_probs=72.8
Q ss_pred CCCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCC-CCCCCeeEEEe---
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP-YPSQAFDLIHC--- 344 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lp-f~d~sFDlVv~--- 344 (666)
++.+|||+|||+|..+..+++. .|+++|+++.++..++.+ +...|+...+...|...++ +.+++||+|++
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n-~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~P 179 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLEN-VERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAP 179 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHH-HHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECC
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHcCCeEEEEECCHHHhhhhccccCCEEEECCC
Confidence 4579999999999988887742 799999999998877644 4445655444445555554 23578999995
Q ss_pred -cccc-c--------ccccC--------hHHHHHHHHHhccCCeEEEEEEC
Q 005981 345 -SRCR-I--------NWTRD--------DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 345 -s~~l-~--------h~~~d--------~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+... + +|..+ ...+|.++.++|||||.++++|-
T Consensus 180 cSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 180 CSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp CCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred cCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 2111 1 11111 14688999999999999999974
No 374
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.52 E-value=6e-07 Score=90.13 Aligned_cols=117 Identities=16% Similarity=0.086 Sum_probs=79.7
Q ss_pred HHhcccCCCceeeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc-----cc--cccccccCCCCC
Q 005981 509 VRALHWKKMKLRNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR-----GL--IGVMHDWCEPFD 577 (666)
Q Consensus 509 ~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er-----Gl--ig~~~~~ce~~~ 577 (666)
.+.+.+..+ .+|||+|||.|.++.+|++. +. +|+.+|. +.+++.+.++ |. +.+.+...+..+
T Consensus 89 ~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~~~-----~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~ 161 (258)
T 2pwy_A 89 VTLLDLAPG--MRVLEAGTGSGGLTLFLARAVGEKG-----LVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE 161 (258)
T ss_dssp HHHTTCCTT--CEEEEECCTTSHHHHHHHHHHCTTS-----EEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC
T ss_pred HHHcCCCCC--CEEEEECCCcCHHHHHHHHHhCCCC-----EEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC
Confidence 344455444 36999999999999999987 44 5566663 5677777665 53 334433322222
Q ss_pred CCC-CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeChh-HHHHHHHHHHhcCcEE
Q 005981 578 TYP-RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSID-VMDELQEIGKAMGWHV 641 (666)
Q Consensus 578 ~yp-~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~-~~~~~~~i~~~l~W~~ 641 (666)
++ .+||+|.++ .-+...+|.++.|+|||||++++.+... ...++.+.++...|..
T Consensus 162 -~~~~~~D~v~~~--------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~ 218 (258)
T 2pwy_A 162 -LEEAAYDGVALD--------LMEPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRL 218 (258)
T ss_dssp -CCTTCEEEEEEE--------SSCGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEE
T ss_pred -CCCCCcCEEEEC--------CcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 44 789999985 1233588999999999999999987653 5666666666666653
No 375
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.52 E-value=3e-07 Score=97.70 Aligned_cols=138 Identities=22% Similarity=0.327 Sum_probs=92.6
Q ss_pred ceeeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCChhHHHhc----cc---cccc-cccCCCCCCCCCccceEEec
Q 005981 518 KLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTLPVIYDR----GL---IGVM-HDWCEPFDTYPRTYDLLHAA 589 (666)
Q Consensus 518 ~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l~~~~er----Gl---ig~~-~~~ce~~~~yp~tyDliha~ 589 (666)
.-.+|||+|||.|.++.+|+++.-++ .++.+|.+.+++.+.++ |+ +.+. +|..+ .+|..||+|.+.
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~D~v~~~ 256 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHV---SATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFE---PLPRKADAIILS 256 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTC---EEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTS---CCSSCEEEEEEE
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCC---EEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCC---CCCCCccEEEEc
Confidence 34579999999999999999874222 33334435667666553 43 3333 44433 356569999999
Q ss_pred cccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh--h------------------------HHHHHHHHHHhcCcEEEE
Q 005981 590 GLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI--D------------------------VMDELQEIGKAMGWHVTL 643 (666)
Q Consensus 590 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~--~------------------------~~~~~~~i~~~l~W~~~~ 643 (666)
.++.+..+. ....+|.++.|+|||||+++|.|.. . ..+.++++++.-.+++..
T Consensus 257 ~vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (360)
T 1tw3_A 257 FVLLNWPDH-DAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEE 335 (360)
T ss_dssp SCGGGSCHH-HHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred ccccCCCHH-HHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEE
Confidence 998876542 2248999999999999999998654 0 135677888888998754
Q ss_pred EeccCCC--CCceEEEEEEeC
Q 005981 644 RETAEGP--HASYRILTADKR 662 (666)
Q Consensus 644 ~~~~~~~--~~~e~~l~~~k~ 662 (666)
...-.+. .....++.|+|.
T Consensus 336 ~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 336 VRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp EEEEECSSSSCEEEEEEEEEC
T ss_pred EEeCCCCcccCccEEEEEEeC
Confidence 4322221 011578888874
No 376
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.52 E-value=2.9e-07 Score=98.07 Aligned_cols=133 Identities=14% Similarity=0.241 Sum_probs=90.4
Q ss_pred ceeeEeeccccchHHHHHHhhC--CCceEEEEeeccCCCCChhHHHhc----cc---cccccccCCCCCCCCCccceEEe
Q 005981 518 KLRNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSGFNTLPVIYDR----GL---IGVMHDWCEPFDTYPRTYDLLHA 588 (666)
Q Consensus 518 ~iRnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~~~~l~~~~er----Gl---ig~~~~~ce~~~~yp~tyDliha 588 (666)
....|||+|||.|.++.+|+++ +. .++.+|.+.+++.+.++ |+ +.+.....+.. .+|. +|+|.+
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~-----~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~-~D~v~~ 262 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPEL-----DSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKE-SYPE-ADAVLF 262 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTC-----EEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTS-CCCC-CSEEEE
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCC-----eEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccC-CCCC-CCEEEE
Confidence 4467999999999999999987 33 33344445667766654 55 44443322222 2343 499999
Q ss_pred ccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh----------------------------hHHHHHHHHHHhcCcE
Q 005981 589 AGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI----------------------------DVMDELQEIGKAMGWH 640 (666)
Q Consensus 589 ~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~----------------------------~~~~~~~~i~~~l~W~ 640 (666)
..++.++.+. ....+|.++.|+|||||+++|.|.. -..+++++++++-.++
T Consensus 263 ~~vlh~~~d~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~ 341 (359)
T 1x19_A 263 CRILYSANEQ-LSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYK 341 (359)
T ss_dssp ESCGGGSCHH-HHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCE
T ss_pred echhccCCHH-HHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCc
Confidence 9998887642 2468999999999999999987610 1345677788888887
Q ss_pred EEEEeccCCCCCceEEEEEEeC
Q 005981 641 VTLRETAEGPHASYRILTADKR 662 (666)
Q Consensus 641 ~~~~~~~~~~~~~e~~l~~~k~ 662 (666)
......-. ...+++++|+
T Consensus 342 ~v~~~~~~----~~~vi~a~kp 359 (359)
T 1x19_A 342 DVTMVRKY----DHLLVQAVKP 359 (359)
T ss_dssp EEEEEEET----TEEEEEEECC
T ss_pred eEEEEecC----CceEEEEeCC
Confidence 65433211 4678888884
No 377
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.51 E-value=2.1e-07 Score=94.30 Aligned_cols=131 Identities=12% Similarity=0.099 Sum_probs=81.6
Q ss_pred eeEeeccccchHHHHHHhhC---CCceEEEEeeccCCCCChhHHHhccc---cccccccCCC-CCCC-----CCccceEE
Q 005981 520 RNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSGFNTLPVIYDRGL---IGVMHDWCEP-FDTY-----PRTYDLLH 587 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~~~~l~~~~erGl---ig~~~~~ce~-~~~y-----p~tyDlih 587 (666)
++|||+|||.|..+.+|++. +..|+.+-+.+.......+.+...|+ |.+.+...+. ++.+ +.+||+|.
T Consensus 62 ~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~ 141 (242)
T 3r3h_A 62 KKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIF 141 (242)
T ss_dssp SEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEE
Confidence 47999999999999999873 44444444444333334444545565 4454433322 2222 47899999
Q ss_pred eccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh------------hHHHHHHHHHHhc----CcEEEEEeccCCCC
Q 005981 588 AAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI------------DVMDELQEIGKAM----GWHVTLRETAEGPH 651 (666)
Q Consensus 588 a~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~------------~~~~~~~~i~~~l----~W~~~~~~~~~~~~ 651 (666)
++.. .-....++.++.|+|||||++++.|.. .....++++.+.+ ++++.+....
T Consensus 142 ~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~---- 211 (242)
T 3r3h_A 142 IDAD------KTNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLLAIA---- 211 (242)
T ss_dssp EESC------GGGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEESSS----
T ss_pred EcCC------hHHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEEEcc----
Confidence 8742 223467899999999999999996432 1223444444433 5666555443
Q ss_pred CceEEEEEEeC
Q 005981 652 ASYRILTADKR 662 (666)
Q Consensus 652 ~~e~~l~~~k~ 662 (666)
..+++++|+
T Consensus 212 --dG~~~~~k~ 220 (242)
T 3r3h_A 212 --DGMFLVQPI 220 (242)
T ss_dssp --SCEEEEEEC
T ss_pred --CceEEEEEc
Confidence 348888874
No 378
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.51 E-value=2.1e-07 Score=92.74 Aligned_cols=132 Identities=16% Similarity=0.087 Sum_probs=78.9
Q ss_pred eeEeeccccchHHHHHHhhC-C--CceEEEEeeccCC-C----CChhHHHhccccccccccCCC---CCCCCCccceEEe
Q 005981 520 RNVLDMRAGFGGFAAALIEQ-K--FDCWVMNVVPVSG-F----NTLPVIYDRGLIGVMHDWCEP---FDTYPRTYDLLHA 588 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~-~--~~vwvmnv~~~~~-~----~~l~~~~erGlig~~~~~ce~---~~~yp~tyDliha 588 (666)
..|||+|||+|.++.+|++. | . .|+.+|. + .+++.+.++.-+.+.+...+. ++..+.+||+|.+
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~-----~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDG-----LVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTC-----EEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCc-----EEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 36999999999999999887 2 3 3455553 2 245555554333344333332 1222479999999
Q ss_pred ccccccCCCCCC-HHHHHHHhhhcccCCeEEEEEeChh----------HHHHHHHHHHhcCcEEEEEeccCCCCCceEEE
Q 005981 589 AGLFSVESKRCN-MSTIMLEMDRMLRPGGHVYIRDSID----------VMDELQEIGKAMGWHVTLRETAEGPHASYRIL 657 (666)
Q Consensus 589 ~~~f~~~~~~c~-~~~~l~E~dRiLRPgG~~ii~d~~~----------~~~~~~~i~~~l~W~~~~~~~~~~~~~~e~~l 657 (666)
+.. ..+ ...++.++.|+|||||++++.-... ...+-.++++...|++.....-+.-....-++
T Consensus 154 ~~~------~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~v 227 (233)
T 2ipx_A 154 DVA------QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVV 227 (233)
T ss_dssp CCC------CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTSSSEEEE
T ss_pred cCC------CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCCccCCcEEE
Confidence 633 112 1355788999999999999963221 12122466777789876532222112345667
Q ss_pred EEEeC
Q 005981 658 TADKR 662 (666)
Q Consensus 658 ~~~k~ 662 (666)
+++|+
T Consensus 228 ~~~~~ 232 (233)
T 2ipx_A 228 VGVYR 232 (233)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 77663
No 379
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.50 E-value=4.1e-08 Score=98.22 Aligned_cols=97 Identities=11% Similarity=-0.019 Sum_probs=70.6
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhccc---cccccccCCCCCC---CC--CccceEEecc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRGL---IGVMHDWCEPFDT---YP--RTYDLLHAAG 590 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erGl---ig~~~~~ce~~~~---yp--~tyDliha~~ 590 (666)
..|||+|||.|.++..|++.+. +|+.+|. +.+++.+.++.- +.+.....+.++. ++ ..||+|.+..
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFP-----RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSS-----CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred CeEEEEcCCCCHHHHHHHHhCC-----CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcc
Confidence 3599999999999999999875 5666763 578888877632 3333333222111 11 2499999999
Q ss_pred ccccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 591 LFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 591 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
++.+... -+...+|.++.|+|||||+++|.|
T Consensus 133 ~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 133 GFHHIPV-EKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp SSTTSCG-GGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhhcCCH-HHHHHHHHHHHHHcCCCCEEEEEe
Confidence 8888753 345799999999999999988875
No 380
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.50 E-value=1.1e-07 Score=97.86 Aligned_cols=137 Identities=14% Similarity=0.138 Sum_probs=77.1
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCC-hhHH-Hhccc-cccc--cccCCCCCCCCCccceEEecccccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNT-LPVI-YDRGL-IGVM--HDWCEPFDTYPRTYDLLHAAGLFSV 594 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~-l~~~-~erGl-ig~~--~~~ce~~~~yp~tyDliha~~~f~~ 594 (666)
..|||+|||.|+|+.+|++++ .|+.+-+.+...... .... ...|. +-+. ....+.++ +.+||+|.|+.. .+
T Consensus 76 ~~VLDlGcGtG~~s~~la~~~-~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~-~~ 151 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASRP-HVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG-ES 151 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTST-TEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECCC-CC
T ss_pred CEEEEeCcCCCHHHHHHHHcC-cEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeCc-cc
Confidence 469999999999999999984 577766666311000 0000 00111 2223 22322233 489999999855 22
Q ss_pred CCCCC-C---HHHHHHHhhhcccCCe--EEEEEe----ChhHHHHHHHHHHhcCcEEEEEeccCCCCCceEEEEEEe
Q 005981 595 ESKRC-N---MSTIMLEMDRMLRPGG--HVYIRD----SIDVMDELQEIGKAMGWHVTLRETAEGPHASYRILTADK 661 (666)
Q Consensus 595 ~~~~c-~---~~~~l~E~dRiLRPgG--~~ii~d----~~~~~~~~~~i~~~l~W~~~~~~~~~~~~~~e~~l~~~k 661 (666)
..+.- + ...+|.++.|+||||| .|++.. ..++++.++.+.+.+. .+.+...-.-....|.++||.+
T Consensus 152 ~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~~f~-~v~~~k~~sR~~s~E~y~v~~~ 227 (265)
T 2oxt_A 152 SPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKWG-GGLVRNPYSRNSTHEMYFTSRA 227 (265)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHHC-CEEECCTTSCTTCCCEEEESSC
T ss_pred CCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHHHHcC-CEEEEEecccCCCccEEEEecC
Confidence 22110 0 0137899999999999 999963 2323344444444332 3333332222345688888754
No 381
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.50 E-value=8.1e-08 Score=94.79 Aligned_cols=126 Identities=17% Similarity=0.176 Sum_probs=81.8
Q ss_pred eeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccC-CCCCCCC-----Cc
Q 005981 520 RNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWC-EPFDTYP-----RT 582 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~c-e~~~~yp-----~t 582 (666)
.+|||+|||.|.++.+|++. +. .|+.+|. +.+++.+.++ |+ +.+.+.-. +.++.++ .+
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDG-----TLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQ 140 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTC-----EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTC
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCC-----EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCC
Confidence 36999999999999999986 44 4556663 4666666554 54 33443322 2222222 78
Q ss_pred cceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeChh------------HHHHHHHH----HHhcCcEEEEEec
Q 005981 583 YDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSID------------VMDELQEI----GKAMGWHVTLRET 646 (666)
Q Consensus 583 yDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~------------~~~~~~~i----~~~l~W~~~~~~~ 646 (666)
||+|.+... .-....++.++-|+|||||++++.|..- ....++++ ...-+|+......
T Consensus 141 fD~v~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~ 214 (225)
T 3tr6_A 141 YDLIYIDAD------KANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIPI 214 (225)
T ss_dssp EEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEECS
T ss_pred ccEEEECCC------HHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 999997632 2345789999999999999999975421 12234443 3344677776655
Q ss_pred cCCCCCceEEEEEEeC
Q 005981 647 AEGPHASYRILTADKR 662 (666)
Q Consensus 647 ~~~~~~~e~~l~~~k~ 662 (666)
.+ .+++++|+
T Consensus 215 ~d------G~~~~~k~ 224 (225)
T 3tr6_A 215 GD------GLTLARKK 224 (225)
T ss_dssp TT------CEEEEEEC
T ss_pred CC------ccEEEEEC
Confidence 44 48888874
No 382
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.50 E-value=6.2e-07 Score=104.50 Aligned_cols=96 Identities=10% Similarity=0.148 Sum_probs=75.4
Q ss_pred eeEeeccccchHHHHHHhhCC---CceEEEEeeccC-CCCChhHHHhc----------cc--cccccccCCCCCCCCCcc
Q 005981 520 RNVLDMRAGFGGFAAALIEQK---FDCWVMNVVPVS-GFNTLPVIYDR----------GL--IGVMHDWCEPFDTYPRTY 583 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~---~~vwvmnv~~~~-~~~~l~~~~er----------Gl--ig~~~~~ce~~~~yp~ty 583 (666)
..|||+|||.|.++.+|++.+ . .|+.+| ++.+++.|.+| |+ +.+++...+.++....+|
T Consensus 723 ~rVLDVGCGTG~lai~LAr~g~p~a-----~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sF 797 (950)
T 3htx_A 723 STLVDFGCGSGSLLDSLLDYPTSLQ-----TIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDV 797 (950)
T ss_dssp SEEEEETCSSSHHHHHHTSSCCCCC-----EEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSC
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCC-----eEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCe
Confidence 469999999999999999986 4 566677 36788888662 55 666666666666555999
Q ss_pred ceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 584 DLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 584 Dliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
|+|.|..+|.|..+. ....++.|+.|+|||| ++||+.
T Consensus 798 DlVV~~eVLeHL~dp-~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 798 DIGTCLEVIEHMEED-QACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp CEEEEESCGGGSCHH-HHHHHHHHHHHTTCCS-EEEEEE
T ss_pred eEEEEeCchhhCChH-HHHHHHHHHHHHcCCC-EEEEEe
Confidence 999999999998753 2346899999999999 888864
No 383
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.49 E-value=1.8e-07 Score=94.45 Aligned_cols=115 Identities=19% Similarity=0.269 Sum_probs=75.5
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc------------cc--cccccccCCC-CCC-CC-C
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR------------GL--IGVMHDWCEP-FDT-YP-R 581 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er------------Gl--ig~~~~~ce~-~~~-yp-~ 581 (666)
..|||+|||+|+|+.+|++.+-+ .+|+.+|. +.+++.+.++ |+ +.++...... ++. ++ .
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPE---DLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTT---SEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CEEEEEcCCCCHHHHHHHHhCCC---CCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 46999999999999999987421 25667763 5666666543 55 4444433332 221 43 7
Q ss_pred ccceEEeccccccC-------CCCCCHHHHHHHhhhcccCCeEEEE-EeChhHHHHHHHHHHhcCc
Q 005981 582 TYDLLHAAGLFSVE-------SKRCNMSTIMLEMDRMLRPGGHVYI-RDSIDVMDELQEIGKAMGW 639 (666)
Q Consensus 582 tyDliha~~~f~~~-------~~~c~~~~~l~E~dRiLRPgG~~ii-~d~~~~~~~~~~i~~~l~W 639 (666)
++|.|... |... ..+-....+|.++.|+|||||.+++ +|..+..+.+.+.+..-.+
T Consensus 128 ~~d~v~~~--~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 128 QLSKMFFC--FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp CEEEEEEE--SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred ccCEEEEE--CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 88888743 2211 1121225899999999999999999 5777667777766666554
No 384
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.49 E-value=4.5e-08 Score=97.70 Aligned_cols=119 Identities=13% Similarity=0.127 Sum_probs=76.6
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHh----ccc--cccccccCCCC-CC-C-CCccceEEec
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYD----RGL--IGVMHDWCEPF-DT-Y-PRTYDLLHAA 589 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~e----rGl--ig~~~~~ce~~-~~-y-p~tyDliha~ 589 (666)
..|||+|||.|.++.+|++..-+ .+|+.+|. +.++..+.+ .|+ +.+++...+.+ +. + +.+||+|++.
T Consensus 36 ~~vLDiGcG~G~~~~~lA~~~p~---~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 36 PVTLEIGFGMGASLVAMAKDRPE---QDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTT---SEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CeEEEEeeeChHHHHHHHHHCCC---CeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 46999999999999999977211 15667773 566666544 465 44444433332 21 3 4899999986
Q ss_pred cccccCCC-----CCCHHHHHHHhhhcccCCeEEEEE-eChhHHHHHHHHHHhc-CcEE
Q 005981 590 GLFSVESK-----RCNMSTIMLEMDRMLRPGGHVYIR-DSIDVMDELQEIGKAM-GWHV 641 (666)
Q Consensus 590 ~~f~~~~~-----~c~~~~~l~E~dRiLRPgG~~ii~-d~~~~~~~~~~i~~~l-~W~~ 641 (666)
...-.... |-.-..++.++.|+|||||+++|. |.....+.+.+++... .|+.
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~~~~~~ 171 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKN 171 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEE
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhCCCccc
Confidence 22111111 111236999999999999999996 6666667777766543 4543
No 385
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.47 E-value=4.3e-07 Score=96.45 Aligned_cols=101 Identities=12% Similarity=0.150 Sum_probs=72.7
Q ss_pred CCCeEEEECCCCchhHHHhcc---------CCeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEe
Q 005981 274 HIRVVMDAGCGVASFGAYLLP---------RNVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHC 344 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~---------~~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~ 344 (666)
...+|||+|||+|.++..+++ .+++|+|+++.++..|+.+... .++...+...|... +...+.||+|++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~-~g~~~~i~~~D~l~-~~~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADL-QRQKMTLLHQDGLA-NLLVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHH-HTCCCEEEESCTTS-CCCCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHh-CCCCceEEECCCCC-ccccCCccEEEE
Confidence 447899999999988876653 3689999999988877755443 45544555555433 234578999998
Q ss_pred cccccccccCh------------------HHHHHHHHHhccCCeEEEEEEC
Q 005981 345 SRCRINWTRDD------------------GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 345 s~~l~h~~~d~------------------~~~L~el~RvLkPGG~lv~st~ 377 (666)
+..+.++ ... ..++.++.+.|+|||.+++..+
T Consensus 208 NPPfg~~-~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 208 DLPVGYY-PDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp ECCCSEE-SCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCCCc-CchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 8664343 211 1579999999999999999863
No 386
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.45 E-value=3.7e-08 Score=106.92 Aligned_cols=123 Identities=16% Similarity=0.170 Sum_probs=81.6
Q ss_pred HHHHhcccCCCceeeEeecccc------chHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhccccccccccCCCC
Q 005981 507 SYVRALHWKKMKLRNVLDMRAG------FGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDRGLIGVMHDWCEPF 576 (666)
Q Consensus 507 ~Y~~~l~~~~~~iRnvlD~g~G------~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~erGlig~~~~~ce~~ 576 (666)
.|.+.+..-..+-.+|||+||| +||.+..|+++ +. .|+.+|. +.+. ....-|.++..-++.+
T Consensus 205 ~Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a-----~V~GVDiSp~m~---~~~~rI~fv~GDa~dl 276 (419)
T 3sso_A 205 HYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRG-----QIYGLDIMDKSH---VDELRIRTIQGDQNDA 276 (419)
T ss_dssp HHHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTC-----EEEEEESSCCGG---GCBTTEEEEECCTTCH
T ss_pred HHHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCC-----EEEEEECCHHHh---hcCCCcEEEEeccccc
Confidence 4555554222234689999999 78888877764 44 4555553 3442 1222255555555554
Q ss_pred CCC------CCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC------------------hhHHHHHHH
Q 005981 577 DTY------PRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS------------------IDVMDELQE 632 (666)
Q Consensus 577 ~~y------p~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~------------------~~~~~~~~~ 632 (666)
+.. +.+||+|.|++. +. -.+....|.|+.|+|||||+++|.|- ..+++.+++
T Consensus 277 pf~~~l~~~d~sFDlVisdgs--H~--~~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~ 352 (419)
T 3sso_A 277 EFLDRIARRYGPFDIVIDDGS--HI--NAHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKS 352 (419)
T ss_dssp HHHHHHHHHHCCEEEEEECSC--CC--HHHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHH
T ss_pred chhhhhhcccCCccEEEECCc--cc--chhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHH
Confidence 332 379999999753 22 23457899999999999999999743 246889999
Q ss_pred HHHhcCcEE
Q 005981 633 IGKAMGWHV 641 (666)
Q Consensus 633 i~~~l~W~~ 641 (666)
+++.++|.-
T Consensus 353 l~D~l~~~~ 361 (419)
T 3sso_A 353 LIDAIQHQE 361 (419)
T ss_dssp HHHHHTGGG
T ss_pred HHHHhcccc
Confidence 999999864
No 387
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.45 E-value=6.4e-07 Score=98.44 Aligned_cols=111 Identities=15% Similarity=0.161 Sum_probs=76.4
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCC-ceEEeecccC--
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAP-AMVAAFATRR-- 331 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~-~~~~~~d~e~-- 331 (666)
.+++.+.+.+.. ....+|||+|||+|.++..|+.. +|+|+|+++.++..|+. .+...++. ..+...|+..
T Consensus 273 ~l~~~~~~~l~~----~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~-n~~~~~~~~v~f~~~d~~~~l 347 (433)
T 1uwv_A 273 KMVARALEWLDV----QPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQ-NARLNGLQNVTFYHENLEEDV 347 (433)
T ss_dssp HHHHHHHHHHTC----CTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEECCTTSCC
T ss_pred HHHHHHHHhhcC----CCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHH-HHHHcCCCceEEEECCHHHHh
Confidence 455555555531 34578999999999999999876 89999999999988874 44455554 3455555544
Q ss_pred --CCCCCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 332 --LPYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 332 --Lpf~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+++.+++||+|++..-... ...++..+. .++|++.++++..
T Consensus 348 ~~~~~~~~~fD~Vv~dPPr~g----~~~~~~~l~-~~~p~~ivyvsc~ 390 (433)
T 1uwv_A 348 TKQPWAKNGFDKVLLDPARAG----AAGVMQQII-KLEPIRIVYVSCN 390 (433)
T ss_dssp SSSGGGTTCCSEEEECCCTTC----CHHHHHHHH-HHCCSEEEEEESC
T ss_pred hhhhhhcCCCCEEEECCCCcc----HHHHHHHHH-hcCCCeEEEEECC
Confidence 3456678999997543221 124555544 4799999998853
No 388
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.45 E-value=5e-07 Score=90.08 Aligned_cols=132 Identities=11% Similarity=0.055 Sum_probs=79.5
Q ss_pred eeEeeccccchHHHHHHhhC-C-CceEEEEeeccCC-CCChhHHHhcc----ccccccccCCC-C--CCCCCccceEEec
Q 005981 520 RNVLDMRAGFGGFAAALIEQ-K-FDCWVMNVVPVSG-FNTLPVIYDRG----LIGVMHDWCEP-F--DTYPRTYDLLHAA 589 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~-~-~~vwvmnv~~~~~-~~~l~~~~erG----lig~~~~~ce~-~--~~yp~tyDliha~ 589 (666)
.+|||+|||.|.++.+|++. | . .|+.+|. +.+++.+.++. -+...+.-.+. . ..++.+||+|.+.
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKG-----IVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED 150 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTS-----EEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEEC
T ss_pred CEEEEEcccCCHHHHHHHHHcCCc-----EEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEe
Confidence 36999999999999999987 4 3 4555553 45666555432 13233322222 0 1234789998733
Q ss_pred cccccCCCCCCHHHHHHHhhhcccCCeEEEEE----e--Ch---h--HHHHHHHHHHhcCcEEEEEeccCCCCCceEEEE
Q 005981 590 GLFSVESKRCNMSTIMLEMDRMLRPGGHVYIR----D--SI---D--VMDELQEIGKAMGWHVTLRETAEGPHASYRILT 658 (666)
Q Consensus 590 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~----d--~~---~--~~~~~~~i~~~l~W~~~~~~~~~~~~~~e~~l~ 658 (666)
..+.-....+|.++.|+|||||++++. . .. . ..+.++ ++....++......-+.-.....+++
T Consensus 151 -----~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~v~ 224 (230)
T 1fbn_A 151 -----VAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHVMFV 224 (230)
T ss_dssp -----CCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECTTTSTTEEEEE
T ss_pred -----cCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccCCCccceEEEE
Confidence 111112257799999999999999994 1 10 0 125666 67777777654332222134457788
Q ss_pred EEeC
Q 005981 659 ADKR 662 (666)
Q Consensus 659 ~~k~ 662 (666)
++|+
T Consensus 225 ~~k~ 228 (230)
T 1fbn_A 225 GIWE 228 (230)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 8874
No 389
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.45 E-value=6e-07 Score=98.59 Aligned_cols=97 Identities=18% Similarity=0.183 Sum_probs=69.6
Q ss_pred CCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCCCCCeeEEEeccccccc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYPSQAFDLIHCSRCRINW 351 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~ 351 (666)
...+|||+|||+|.++..|++. +|+|+|+++.++..++.+ +...++...+...|+.++.. .+||+|++......
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n-~~~ngl~v~~~~~d~~~~~~--~~fD~Vv~dPPr~g- 365 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRN-VEINNVDAEFEVASDREVSV--KGFDTVIVDPPRAG- 365 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHHTCCEEEEECCTTTCCC--TTCSEEEECCCTTC-
T ss_pred CCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHH-HHHcCCcEEEEECChHHcCc--cCCCEEEEcCCccc-
Confidence 3478999999999999999876 899999999999888754 44455554455556666542 28999997543211
Q ss_pred ccChHHHHHHHHHhccCCeEEEEEEC
Q 005981 352 TRDDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 352 ~~d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
....++..+ +.|+|||.++++..
T Consensus 366 --~~~~~~~~l-~~l~p~givyvsc~ 388 (425)
T 2jjq_A 366 --LHPRLVKRL-NREKPGVIVYVSCN 388 (425)
T ss_dssp --SCHHHHHHH-HHHCCSEEEEEESC
T ss_pred --hHHHHHHHH-HhcCCCcEEEEECC
Confidence 122455555 45999999999853
No 390
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.45 E-value=5.1e-07 Score=92.64 Aligned_cols=114 Identities=15% Similarity=0.141 Sum_probs=79.9
Q ss_pred hcccCCCceeeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc-----cc--ccccc-ccCCCCCC
Q 005981 511 ALHWKKMKLRNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR-----GL--IGVMH-DWCEPFDT 578 (666)
Q Consensus 511 ~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er-----Gl--ig~~~-~~ce~~~~ 578 (666)
.+.+..+ .+|||+|||.|+++.+|++. +. .|+.+|. +.+++.+.++ |+ +.+.+ |..+ .
T Consensus 105 ~~~~~~~--~~VLD~G~G~G~~~~~la~~~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~---~ 174 (275)
T 1yb2_A 105 RCGLRPG--MDILEVGVGSGNMSSYILYALNGKG-----TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD---F 174 (275)
T ss_dssp -CCCCTT--CEEEEECCTTSHHHHHHHHHHTTSS-----EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT---C
T ss_pred HcCCCCc--CEEEEecCCCCHHHHHHHHHcCCCC-----EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc---c
Confidence 3444444 36999999999999999886 44 5666664 5677776665 54 33333 3322 2
Q ss_pred CC-CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeChh-HHHHHHHHHHhcCcEEE
Q 005981 579 YP-RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSID-VMDELQEIGKAMGWHVT 642 (666)
Q Consensus 579 yp-~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~-~~~~~~~i~~~l~W~~~ 642 (666)
++ .+||+|.+. . -+...+|.++.|+|||||++++.+... ..+.+.+.++...|...
T Consensus 175 ~~~~~fD~Vi~~-----~---~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~ 232 (275)
T 1yb2_A 175 ISDQMYDAVIAD-----I---PDPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHL 232 (275)
T ss_dssp CCSCCEEEEEEC-----C---SCGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEE
T ss_pred CcCCCccEEEEc-----C---cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEE
Confidence 34 789999983 1 233589999999999999999987654 66777777777777653
No 391
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.44 E-value=2e-07 Score=90.94 Aligned_cols=100 Identities=16% Similarity=0.045 Sum_probs=69.1
Q ss_pred HHhcccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCCCCCC
Q 005981 509 VRALHWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFDTYPR 581 (666)
Q Consensus 509 ~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~~yp~ 581 (666)
.+.+.+..+ ..|||+|||.|.++..|++.+. +|+.+|. +.+++.+.++ |+ +.+.+...+....-..
T Consensus 70 ~~~l~~~~~--~~vLdiG~G~G~~~~~la~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 142 (210)
T 3lbf_A 70 TELLELTPQ--SRVLEIGTGSGYQTAILAHLVQ-----HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARA 142 (210)
T ss_dssp HHHTTCCTT--CEEEEECCTTSHHHHHHHHHSS-----EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred HHhcCCCCC--CEEEEEcCCCCHHHHHHHHhCC-----EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCC
Confidence 344555444 3599999999999999999866 5555653 5677766654 44 4444433322222237
Q ss_pred ccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh
Q 005981 582 TYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI 624 (666)
Q Consensus 582 tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~ 624 (666)
+||+|.+...+.+..+ ++.|+|||||++++.-..
T Consensus 143 ~~D~i~~~~~~~~~~~---------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 143 PFDAIIVTAAPPEIPT---------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CEEEEEESSBCSSCCT---------HHHHTEEEEEEEEEEECS
T ss_pred CccEEEEccchhhhhH---------HHHHhcccCcEEEEEEcC
Confidence 9999999977766543 688999999999997543
No 392
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.44 E-value=2.6e-07 Score=90.50 Aligned_cols=91 Identities=14% Similarity=0.068 Sum_probs=63.7
Q ss_pred eeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccC-CCCCCCCCccceEE
Q 005981 520 RNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWC-EPFDTYPRTYDLLH 587 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~c-e~~~~yp~tyDlih 587 (666)
.+|||+|||.|.++.+|++. +. .|+.+|. +.+++.+.++ |+ +.+.+... +.++..+. ||+|.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~ 131 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISS-----RVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILF 131 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTC-----EEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCC-----EEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEE
Confidence 46999999999999999876 44 4555553 4566665543 44 44443332 22244457 99999
Q ss_pred eccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 588 AAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 588 a~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
++. .......++.++.|+|||||.+++.|
T Consensus 132 ~~~------~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 132 MDC------DVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EET------TTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred EcC------ChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 872 23456799999999999999999964
No 393
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.43 E-value=1.2e-06 Score=89.49 Aligned_cols=118 Identities=9% Similarity=0.059 Sum_probs=80.5
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc-------cc---cccccccCCCCC------CC-CC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR-------GL---IGVMHDWCEPFD------TY-PR 581 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er-------Gl---ig~~~~~ce~~~------~y-p~ 581 (666)
.+|||+|||.|.++..|+++.-. .+|+.+|. +.+++.+.++ |+ +.+++...+.+. .+ +.
T Consensus 38 ~~VLDlG~G~G~~~l~la~~~~~---~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 38 CRIADLGAGAGAAGMAVAARLEK---AEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp EEEEECCSSSSHHHHHHHHHCTT---EEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CEEEEeCChHhHHHHHHHHhCCC---CeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 47999999999999999987311 35666764 5666666553 33 445555544441 23 37
Q ss_pred ccceEEeccccccC---------------CCCCCHHHHHHHhhhcccCCeEEEEEeChhHHHHHHHHHHhcCcEE
Q 005981 582 TYDLLHAAGLFSVE---------------SKRCNMSTIMLEMDRMLRPGGHVYIRDSIDVMDELQEIGKAMGWHV 641 (666)
Q Consensus 582 tyDliha~~~f~~~---------------~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~~~~~~~~i~~~l~W~~ 641 (666)
+||+|.++--|... ...+.++.++.++.|+|||||++++--..+....+.++++.- |..
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGG 188 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEE
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCc
Confidence 99999997443321 234568899999999999999999987777777777777663 653
No 394
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.42 E-value=1.6e-07 Score=89.41 Aligned_cols=108 Identities=15% Similarity=0.159 Sum_probs=74.1
Q ss_pred ccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhcc--ccccccccCCCCCC--CC-CccceE
Q 005981 513 HWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRG--LIGVMHDWCEPFDT--YP-RTYDLL 586 (666)
Q Consensus 513 ~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erG--lig~~~~~ce~~~~--yp-~tyDli 586 (666)
+++.| ..|||+|||..+ +| ++.|++.+.+|- -+.+.+.-.+.++. ++ .+||+|
T Consensus 9 g~~~g--~~vL~~~~g~v~-------------------vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 67 (176)
T 2ld4_A 9 GISAG--QFVAVVWDKSSP-------------------VEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDII 67 (176)
T ss_dssp TCCTT--SEEEEEECTTSC-------------------HHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEE
T ss_pred CCCCC--CEEEEecCCcee-------------------eeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEE
Confidence 34445 459999998521 34 356777777763 24444444444443 34 899999
Q ss_pred EeccccccC-CCCCCHHHHHHHhhhcccCCeEEEEEeChh----------HHHHHHHHHHhcCcEEEEEe
Q 005981 587 HAAGLFSVE-SKRCNMSTIMLEMDRMLRPGGHVYIRDSID----------VMDELQEIGKAMGWHVTLRE 645 (666)
Q Consensus 587 ha~~~f~~~-~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~----------~~~~~~~i~~~l~W~~~~~~ 645 (666)
.|..++.+. .+ ...+|.|+.|+|||||++++.+... ..+.+...++.-.+ +.+..
T Consensus 68 ~~~~~l~~~~~~---~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~~~~ 133 (176)
T 2ld4_A 68 LSGLVPGSTTLH---SAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VEVKE 133 (176)
T ss_dssp EECCSTTCCCCC---CHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EEEEE
T ss_pred EECChhhhcccC---HHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cEeec
Confidence 999888776 43 4799999999999999999975421 15778888887777 55443
No 395
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.42 E-value=1.5e-07 Score=97.16 Aligned_cols=100 Identities=13% Similarity=0.061 Sum_probs=73.5
Q ss_pred ceeeEeeccccc---hHHHHHHhhC--CCceEEEEeeccCC-CCChhHHHhc----cccccccccCCCC----------C
Q 005981 518 KLRNVLDMRAGF---GGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIYDR----GLIGVMHDWCEPF----------D 577 (666)
Q Consensus 518 ~iRnvlD~g~G~---Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~er----Glig~~~~~ce~~----------~ 577 (666)
.++.|||+|||+ |.+...+... +. .|+.+|. +.++..+.++ +-+.+.+...+.. .
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~-----~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 151 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDA-----RVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRR 151 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTC-----EEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCC-----EEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhc
Confidence 467899999999 9887766553 34 5667774 6788887765 2233343332211 1
Q ss_pred CCC-CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC
Q 005981 578 TYP-RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS 623 (666)
Q Consensus 578 ~yp-~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~ 623 (666)
.+| .+||+|.+..+|.+..+. ....+|.|+.|+|||||+++|.+.
T Consensus 152 ~~d~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 152 MIDFSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp HCCTTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEEE
T ss_pred cCCCCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEe
Confidence 244 589999999999988765 678999999999999999999854
No 396
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.40 E-value=2.6e-07 Score=95.79 Aligned_cols=132 Identities=13% Similarity=0.122 Sum_probs=73.9
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCChhHHHhc-------cc-cccc--cccCCCCCCCCCccceEEec
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTLPVIYDR-------GL-IGVM--HDWCEPFDTYPRTYDLLHAA 589 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l~~~~er-------Gl-ig~~--~~~ce~~~~yp~tyDliha~ 589 (666)
..|||+|||.|+|+.+|++++ .|+.+-+.+. +..+.++ |. +-+. ....+.++ +.+||+|.|+
T Consensus 84 ~~VLDlGcGtG~~s~~la~~~-~V~gVD~s~m-----~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd 155 (276)
T 2wa2_A 84 GTVVDLGCGRGSWSYYAASQP-NVREVKAYTL-----GTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCD 155 (276)
T ss_dssp EEEEEESCTTCHHHHHHHTST-TEEEEEEECC-----CCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEEC
T ss_pred CEEEEeccCCCHHHHHHHHcC-CEEEEECchh-----hhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEEC
Confidence 469999999999999999984 5666666663 1111111 11 2233 33333333 4899999998
Q ss_pred cccccCCCC-CC---HHHHHHHhhhcccCCe--EEEEEe----ChhHHHHHHHHHHhcCcEEEEEeccCCCCCceEEEEE
Q 005981 590 GLFSVESKR-CN---MSTIMLEMDRMLRPGG--HVYIRD----SIDVMDELQEIGKAMGWHVTLRETAEGPHASYRILTA 659 (666)
Q Consensus 590 ~~f~~~~~~-c~---~~~~l~E~dRiLRPgG--~~ii~d----~~~~~~~~~~i~~~l~W~~~~~~~~~~~~~~e~~l~~ 659 (666)
.. ....+. -+ ...+|.++.|+||||| .|++.. ..++++.++.+-+.+. .+.+...-.-....|.+++|
T Consensus 156 ~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~~~~~~~~l~~l~~~f~-~v~v~P~~sR~~s~E~y~v~ 233 (276)
T 2wa2_A 156 IG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPYSCDVLEALMKMQARFG-GGLIRVPLSRNSTHEMYFVS 233 (276)
T ss_dssp CC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCCSHHHHHHHHHHHHHHC-CEEECCTTSCTTCCCEEEES
T ss_pred CC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCCchhHHHHHHHHHHHcC-CEEEEcCCCCCcchheEEec
Confidence 55 222111 00 0137899999999999 999863 2322333444333221 22222111112346777777
Q ss_pred Ee
Q 005981 660 DK 661 (666)
Q Consensus 660 ~k 661 (666)
.+
T Consensus 234 ~~ 235 (276)
T 2wa2_A 234 GI 235 (276)
T ss_dssp SC
T ss_pred cc
Confidence 54
No 397
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.40 E-value=1.3e-07 Score=92.75 Aligned_cols=124 Identities=13% Similarity=0.143 Sum_probs=79.6
Q ss_pred eEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc----cccccccCCCC-CCC-CCc-cceEEe
Q 005981 521 NVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL----IGVMHDWCEPF-DTY-PRT-YDLLHA 588 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl----ig~~~~~ce~~-~~y-p~t-yDliha 588 (666)
.|||+|||+|.++.+++.++. -.|+.+|. +.+++.+.++ |+ +.+++..++.+ ... +.+ ||+|.+
T Consensus 56 ~vLDlGcGtG~~~~~~~~~~~----~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 56 ECLDGFAGSGSLGFEALSRQA----KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp EEEETTCTTCHHHHHHHHTTC----SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred eEEEcCCccCHHHHHHHHccC----CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 599999999999998887763 25777774 5777777654 33 33444333332 222 378 999999
Q ss_pred ccccccCCCCCCHHHHHHHh--hhcccCCeEEEEEeChhHHHHHHHHHHhcCcEEEEEeccCCCCCceEEEEEEe
Q 005981 589 AGLFSVESKRCNMSTIMLEM--DRMLRPGGHVYIRDSIDVMDELQEIGKAMGWHVTLRETAEGPHASYRILTADK 661 (666)
Q Consensus 589 ~~~f~~~~~~c~~~~~l~E~--dRiLRPgG~~ii~d~~~~~~~~~~i~~~l~W~~~~~~~~~~~~~~e~~l~~~k 661 (666)
+..|. .-....++.++ .|+|||||.+++...... +... .-.|..... ..+| ...+.+.+|
T Consensus 132 ~~~~~----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~---~~~~--~~~~~~~~~-~~yG---~~~~~~~~~ 193 (201)
T 2ift_A 132 DPPFH----FNLAEQAISLLCENNWLKPNALIYVETEKDK---PLIT--PENWTLLKE-KTTG---IVSYRLYQN 193 (201)
T ss_dssp CCCSS----SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS---CCCC--CTTEEEEEE-EEET---TEEEEEEEE
T ss_pred CCCCC----CccHHHHHHHHHhcCccCCCcEEEEEECCCC---Cccc--cchhHHHHH-HhcC---CEEEEEEec
Confidence 86654 22356888888 789999999999755443 1111 124665432 2233 456666665
No 398
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.39 E-value=7.5e-07 Score=93.61 Aligned_cols=99 Identities=15% Similarity=0.141 Sum_probs=59.6
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCChhHHH-h-ccc--cccccccCCCCCCCCCccceEEeccccccC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTLPVIY-D-RGL--IGVMHDWCEPFDTYPRTYDLLHAAGLFSVE 595 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l~~~~-e-rGl--ig~~~~~ce~~~~yp~tyDliha~~~f~~~ 595 (666)
..|||+|||.|+++.+|++++ .|..+-+..+.++.++..+. + .|. +.+..+ .+.+..-+.+||+|.|+..+. .
T Consensus 84 ~~VLDlGcG~G~~s~~la~~~-~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~D~~~l~~~~fD~V~sd~~~~-~ 160 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGLK-NVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSG-VDVFFIPPERCDTLLCDIGES-S 160 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTST-TEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECS-CCTTTSCCCCCSEEEECCCCC-C
T ss_pred CEEEEEcCCCCHHHHHHHhcC-CEEEEeccccCchhHHHHHHhhhcCCCCeEEEec-cccccCCcCCCCEEEECCccc-c
Confidence 469999999999999999985 46655552222222221111 1 111 333333 111211137999999987664 2
Q ss_pred CCC-CC---HHHHHHHhhhcccCCeEEEEE
Q 005981 596 SKR-CN---MSTIMLEMDRMLRPGGHVYIR 621 (666)
Q Consensus 596 ~~~-c~---~~~~l~E~dRiLRPgG~~ii~ 621 (666)
... -+ ...+|.++.|+|||||.|++.
T Consensus 161 g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 161 PNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 211 00 114789999999999999996
No 399
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.39 E-value=3.8e-07 Score=100.94 Aligned_cols=103 Identities=20% Similarity=0.212 Sum_probs=71.4
Q ss_pred CCCeEEEECCCCchhHHHhccC-----CeEEEeCCcchHHHHHHHHHHHcCCCc-eEEeecccCCC-CCCCCeeEEEecc
Q 005981 274 HIRVVMDAGCGVASFGAYLLPR-----NVITMSIAPKDVHENQIQFALERGAPA-MVAAFATRRLP-YPSQAFDLIHCSR 346 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~~-~~~~~d~e~Lp-f~d~sFDlVv~s~ 346 (666)
++.+|||+|||+|..+..+++. .|+++|+++.++..++.+ +...|+.. .+...|...++ ..+++||+|++..
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n-~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~Da 183 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSEN-IERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDA 183 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHH-HHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEEC
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHH-HHHcCCCceEEEeCCHHHhhhhccccCCEEEECC
Confidence 4579999999999888777643 799999999988777644 44456554 33344544443 2357899999632
Q ss_pred c----c-c--------ccccC--------hHHHHHHHHHhccCCeEEEEEEC
Q 005981 347 C----R-I--------NWTRD--------DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 347 ~----l-~--------h~~~d--------~~~~L~el~RvLkPGG~lv~st~ 377 (666)
. . + .|..+ ...+|.++.++|||||.++++|-
T Consensus 184 PCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 184 PCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp CCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred CCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 1 0 0 11111 12678999999999999999974
No 400
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.38 E-value=1.9e-07 Score=92.05 Aligned_cols=131 Identities=14% Similarity=0.124 Sum_probs=81.2
Q ss_pred eeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccC-CCCCCCC----Ccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWC-EPFDTYP----RTY 583 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~c-e~~~~yp----~ty 583 (666)
.+|||+|||.|+++.+|++. +. .|+.+|. +.+++.+.++ |+ +.+.+.-. +.++.++ .+|
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~f 134 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLARGLSSGG-----RVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPF 134 (223)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCSSC-----EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCC
T ss_pred CEEEEecCCccHHHHHHHHhCCCCC-----EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCc
Confidence 46999999999999999987 44 5566663 4566665543 55 43443222 2122221 579
Q ss_pred ceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeChh------------HHHHHHHH----HHhcCcEEEEEecc
Q 005981 584 DLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSID------------VMDELQEI----GKAMGWHVTLRETA 647 (666)
Q Consensus 584 Dliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~------------~~~~~~~i----~~~l~W~~~~~~~~ 647 (666)
|+|.++... -....++.++.|+|||||++++.+..- ....++++ ...=+|.+.....-
T Consensus 135 D~v~~d~~~------~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~ 208 (223)
T 3duw_A 135 DFIFIDADK------QNNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQTV 208 (223)
T ss_dssp SEEEECSCG------GGHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEE
T ss_pred CEEEEcCCc------HHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEecc
Confidence 999987431 234689999999999999999864321 12333333 33446666655430
Q ss_pred CCCCCceEEEEEEeC
Q 005981 648 EGPHASYRILTADKR 662 (666)
Q Consensus 648 ~~~~~~e~~l~~~k~ 662 (666)
+..+...+++++|+
T Consensus 209 -~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 209 -GSKGYDGFIMAVVK 222 (223)
T ss_dssp -ETTEEEEEEEEEEC
T ss_pred -CCCCCCeeEEEEEe
Confidence 11124678888764
No 401
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.38 E-value=4.3e-07 Score=96.54 Aligned_cols=129 Identities=16% Similarity=0.141 Sum_probs=82.3
Q ss_pred eEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc-cccccccCCCCCCCCCccceEEecccccc
Q 005981 521 NVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL-IGVMHDWCEPFDTYPRTYDLLHAAGLFSV 594 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl-ig~~~~~ce~~~~yp~tyDliha~~~f~~ 594 (666)
+|||+|||+|.++.+|++.+-. .+|+.+|. +.+++.+.++ |+ +.+.+..+..+ .+.+||+|.++..|.+
T Consensus 199 ~VLDlGcG~G~~~~~la~~~~~---~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~--~~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 199 KVLDVGCGAGVLSVAFARHSPK---IRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSE--VKGRFDMIISNPPFHD 273 (343)
T ss_dssp BCCBTTCTTSHHHHHHHHHCTT---CBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT--CCSCEEEEEECCCCCS
T ss_pred eEEEecCccCHHHHHHHHHCCC---CEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccccc--ccCCeeEEEECCCccc
Confidence 6999999999999999987511 14555653 4566666553 44 23333333222 2589999999988765
Q ss_pred CC--CCCCHHHHHHHhhhcccCCeEEEEEeCh--hHHHHHHHHHHhcCcEEEEEeccCCCCCceEEEEEEeC
Q 005981 595 ES--KRCNMSTIMLEMDRMLRPGGHVYIRDSI--DVMDELQEIGKAMGWHVTLRETAEGPHASYRILTADKR 662 (666)
Q Consensus 595 ~~--~~c~~~~~l~E~dRiLRPgG~~ii~d~~--~~~~~~~~i~~~l~W~~~~~~~~~~~~~~e~~l~~~k~ 662 (666)
.. .......++.++.|+|||||.++|.... .....++++... ++....+ ..-+|+.++|.
T Consensus 274 g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f~~--~~~~~~~------~gf~v~~~~k~ 337 (343)
T 2pjd_A 274 GMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGF--HEVIAQT------GRFKVYRAIMT 337 (343)
T ss_dssp SSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHHSC--CEEEEEC------SSEEEEEEEC-
T ss_pred CccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhcCc--eEEEeeC------CCEEEEEEEeC
Confidence 32 1123468999999999999999997433 234445555442 3333222 25788888763
No 402
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.38 E-value=7.9e-07 Score=89.96 Aligned_cols=138 Identities=14% Similarity=0.086 Sum_probs=78.8
Q ss_pred cCCCceeeEeeccccchHHHHHHhhC-CCceEEEEeeccCC-CCC----hhHHHhc-cccccccccCCCC--CCCCCccc
Q 005981 514 WKKMKLRNVLDMRAGFGGFAAALIEQ-KFDCWVMNVVPVSG-FNT----LPVIYDR-GLIGVMHDWCEPF--DTYPRTYD 584 (666)
Q Consensus 514 ~~~~~iRnvlD~g~G~Ggfaa~L~~~-~~~vwvmnv~~~~~-~~~----l~~~~er-Glig~~~~~ce~~--~~yp~tyD 584 (666)
++.| ..|||+|||+|+++.+|++. |-.- .|+.+|. +.+ ++.+.+| ++.-+..|-.+.. ...+..||
T Consensus 74 l~~g--~~VLDlG~GtG~~t~~la~~v~~~G---~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D 148 (232)
T 3id6_C 74 IRKG--TKVLYLGAASGTTISHVSDIIELNG---KAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVD 148 (232)
T ss_dssp CCTT--CEEEEETCTTSHHHHHHHHHHTTTS---EEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEE
T ss_pred CCCC--CEEEEEeecCCHHHHHHHHHhCCCC---EEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceE
Confidence 5555 35999999999999998874 1000 3445553 333 4555555 3333334433221 12247899
Q ss_pred eEEeccccccCCCCCCHHHHHH-HhhhcccCCeEEEEEe----------ChhHHHHHHHHHHhcCcEEEEEeccCCC-CC
Q 005981 585 LLHAAGLFSVESKRCNMSTIML-EMDRMLRPGGHVYIRD----------SIDVMDELQEIGKAMGWHVTLRETAEGP-HA 652 (666)
Q Consensus 585 liha~~~f~~~~~~c~~~~~l~-E~dRiLRPgG~~ii~d----------~~~~~~~~~~i~~~l~W~~~~~~~~~~~-~~ 652 (666)
+|.++..+ .+...+|. .+.|+|||||++++.- ..++.+.+...++.-..++....+ -.| +.
T Consensus 149 ~I~~d~a~------~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~-l~p~~~ 221 (232)
T 3id6_C 149 VLYVDIAQ------PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIIN-LDPYDK 221 (232)
T ss_dssp EEEECCCC------TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEE-CTTTCS
T ss_pred EEEecCCC------hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEec-cCCCcC
Confidence 99987432 33345555 5566999999999861 122334444455555666544322 223 34
Q ss_pred ceEEEEEEeCC
Q 005981 653 SYRILTADKRL 663 (666)
Q Consensus 653 ~e~~l~~~k~~ 663 (666)
..-+++++|++
T Consensus 222 ~h~~v~~~~~~ 232 (232)
T 3id6_C 222 DHAIVLSKYKG 232 (232)
T ss_dssp SCEEEEEEEC-
T ss_pred ceEEEEEEeCC
Confidence 56788888764
No 403
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.37 E-value=1.4e-07 Score=95.82 Aligned_cols=89 Identities=16% Similarity=0.191 Sum_probs=65.3
Q ss_pred eeEeeccccchHHHHHHhhC--CCceEEEEeeccC-CCCChhHHHhccc-cccccccCCCCCCCCCccceEEeccccccC
Q 005981 520 RNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVS-GFNTLPVIYDRGL-IGVMHDWCEPFDTYPRTYDLLHAAGLFSVE 595 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~-~~~~l~~~~erGl-ig~~~~~ce~~~~yp~tyDliha~~~f~~~ 595 (666)
..|||+|||.|.++..|++. +. +|+.+| ++.+++.+.+++- +.+...-.+.++.-+.+||+|.+...
T Consensus 87 ~~vLdiG~G~G~~~~~l~~~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~---- 157 (269)
T 1p91_A 87 TAVLDIGCGEGYYTHAFADALPEI-----TTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYA---- 157 (269)
T ss_dssp CEEEEETCTTSTTHHHHHHTCTTS-----EEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESC----
T ss_pred CEEEEECCCCCHHHHHHHHhCCCC-----eEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCC----
Confidence 46999999999999999987 55 455666 3678888888763 33333333444422379999998643
Q ss_pred CCCCCHHHHHHHhhhcccCCeEEEEEeC
Q 005981 596 SKRCNMSTIMLEMDRMLRPGGHVYIRDS 623 (666)
Q Consensus 596 ~~~c~~~~~l~E~dRiLRPgG~~ii~d~ 623 (666)
...+.|+.|+|||||++++.+.
T Consensus 158 ------~~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 158 ------PCKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp ------CCCHHHHHHHEEEEEEEEEEEE
T ss_pred ------hhhHHHHHHhcCCCcEEEEEEc
Confidence 2358999999999999999753
No 404
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.36 E-value=5.1e-07 Score=86.83 Aligned_cols=133 Identities=17% Similarity=0.155 Sum_probs=69.7
Q ss_pred eeEeeccccchHHHHHHhhC-C----------CceEEEEeeccCCCCChhHHHhccccccc-cccCCCCC-------CCC
Q 005981 520 RNVLDMRAGFGGFAAALIEQ-K----------FDCWVMNVVPVSGFNTLPVIYDRGLIGVM-HDWCEPFD-------TYP 580 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~-~----------~~vwvmnv~~~~~~~~l~~~~erGlig~~-~~~ce~~~-------~yp 580 (666)
.+|||+|||.|.++.+|+++ | . .|+.+|...+... .+ +..+ +....... .++
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~-----~v~~vD~s~~~~~---~~-~~~~~~~d~~~~~~~~~~~~~~~ 94 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVG-----FVLGVDLLHIFPL---EG-ATFLCPADVTDPRTSQRILEVLP 94 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCC-----EEEEECSSCCCCC---TT-CEEECSCCTTSHHHHHHHHHHSG
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCc-----eEEEEechhcccC---CC-CeEEEeccCCCHHHHHHHHHhcC
Confidence 46999999999999999987 4 3 3444442211100 11 1111 11111100 123
Q ss_pred -CccceEEeccccccCCCC--------CCHHHHHHHhhhcccCCeEEEEEeCh-hHHHHHHHHHHhcCcEEEEEecc-CC
Q 005981 581 -RTYDLLHAAGLFSVESKR--------CNMSTIMLEMDRMLRPGGHVYIRDSI-DVMDELQEIGKAMGWHVTLRETA-EG 649 (666)
Q Consensus 581 -~tyDliha~~~f~~~~~~--------c~~~~~l~E~dRiLRPgG~~ii~d~~-~~~~~~~~i~~~l~W~~~~~~~~-~~ 649 (666)
++||+|.|+..+...... .....+|.++.|+|||||.+++.+-. +....+...++..--++...... ..
T Consensus 95 ~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~f~~v~~~~~~~~~ 174 (196)
T 2nyu_A 95 GRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASR 174 (196)
T ss_dssp GGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHHEEEEEEECCC---
T ss_pred CCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHHhcceEEECCcccC
Confidence 589999997644332211 01137899999999999999998432 22334444444432223333221 12
Q ss_pred CCCceEEEEEEe
Q 005981 650 PHASYRILTADK 661 (666)
Q Consensus 650 ~~~~e~~l~~~k 661 (666)
....|.+++|..
T Consensus 175 ~~~~e~~~v~~g 186 (196)
T 2nyu_A 175 KESSEVYFLATQ 186 (196)
T ss_dssp -----EEEEEEE
T ss_pred ccCceEEEEeee
Confidence 235678888764
No 405
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.35 E-value=1e-06 Score=87.23 Aligned_cols=129 Identities=12% Similarity=0.072 Sum_probs=75.0
Q ss_pred eEeeccccchHHHHHHhhC-C--CceEEEEeeccCC-CCChhHHHhc----cccccccccCCCC---CCCCCccceEEec
Q 005981 521 NVLDMRAGFGGFAAALIEQ-K--FDCWVMNVVPVSG-FNTLPVIYDR----GLIGVMHDWCEPF---DTYPRTYDLLHAA 589 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~-~--~~vwvmnv~~~~~-~~~l~~~~er----Glig~~~~~ce~~---~~yp~tyDliha~ 589 (666)
.|||+|||.|.++.+|++. | . .|+.+|. +.+++.+.++ .-+.+.+...+.. ...+.+||+|.++
T Consensus 76 ~vLDlG~G~G~~~~~la~~~~~~~-----~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 76 SVLYLGIASGTTASHVSDIVGWEG-----KIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp EEEEETTTSTTHHHHHHHHHCTTS-----EEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred EEEEEeccCCHHHHHHHHHhCCCe-----EEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 6999999999999999876 2 3 3444452 3344443332 1133333332221 2235789999986
Q ss_pred cccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh---------h--HHHHHHHHHHhcCcEEEEEeccCCC-CCceEEE
Q 005981 590 GLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI---------D--VMDELQEIGKAMGWHVTLRETAEGP-HASYRIL 657 (666)
Q Consensus 590 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~---------~--~~~~~~~i~~~l~W~~~~~~~~~~~-~~~e~~l 657 (666)
.. ..-....++.++.|+|||||++++.-.. . ..+.++.+ ..- ++......- .+ ....-++
T Consensus 151 ~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~~-~~~~~~~~~~ 222 (227)
T 1g8a_A 151 VA-----QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLNL-EPYEKDHALF 222 (227)
T ss_dssp CC-----STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEEC-TTTSSSEEEE
T ss_pred CC-----CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEecc-CcccCCCEEE
Confidence 33 1111235599999999999999995111 1 12456666 443 776543221 22 2345577
Q ss_pred EEEeC
Q 005981 658 TADKR 662 (666)
Q Consensus 658 ~~~k~ 662 (666)
+++|+
T Consensus 223 ~~~~~ 227 (227)
T 1g8a_A 223 VVRKT 227 (227)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 87774
No 406
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.35 E-value=3.7e-07 Score=90.87 Aligned_cols=92 Identities=15% Similarity=0.222 Sum_probs=66.4
Q ss_pred eeEeeccccchHHHHHHhhC--CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCC-CCCC--CCccceE
Q 005981 520 RNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEP-FDTY--PRTYDLL 586 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~-~~~y--p~tyDli 586 (666)
.+|||+|||.|.++.+|++. +. +|+.+|. +.+++.+.++ |+ +.+.+...+. .+.. +.+||+|
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I 130 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALPEA-----TIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVL 130 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCTTC-----EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEE
T ss_pred CEEEEecCCCcHHHHHHHHHCCCC-----EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEE
Confidence 36999999999999999987 34 5666664 5677777665 54 4444332222 2222 4789999
Q ss_pred EeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 587 HAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 587 ha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
.+..... ....+|.++.|+|||||.+++.|
T Consensus 131 ~~~~~~~------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 131 FIDAAKG------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEGGGS------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred EECCCHH------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 9875432 45799999999999999999974
No 407
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.34 E-value=3.6e-07 Score=90.48 Aligned_cols=100 Identities=17% Similarity=0.083 Sum_probs=68.4
Q ss_pred HHhcccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhcc----ccccccccCCCCCCCCCcc
Q 005981 509 VRALHWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRG----LIGVMHDWCEPFDTYPRTY 583 (666)
Q Consensus 509 ~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erG----lig~~~~~ce~~~~yp~ty 583 (666)
.+.+.+..+. .|||+|||.|.++..|++.+. +|+.+|. +.+++.+.++. -+.+.+...+.....+.+|
T Consensus 63 ~~~~~~~~~~--~vLdiG~G~G~~~~~l~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~f 135 (231)
T 1vbf_A 63 LDELDLHKGQ--KVLEIGTGIGYYTALIAEIVD-----KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPY 135 (231)
T ss_dssp HHHTTCCTTC--EEEEECCTTSHHHHHHHHHSS-----EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCE
T ss_pred HHhcCCCCCC--EEEEEcCCCCHHHHHHHHHcC-----EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCc
Confidence 3444444443 699999999999999999865 5666663 57777777662 2333332222211123789
Q ss_pred ceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh
Q 005981 584 DLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI 624 (666)
Q Consensus 584 Dliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~ 624 (666)
|+|.+..++.+.. .++.|+|||||.+++....
T Consensus 136 D~v~~~~~~~~~~---------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 136 DRVVVWATAPTLL---------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp EEEEESSBBSSCC---------HHHHHTEEEEEEEEEEECS
T ss_pred cEEEECCcHHHHH---------HHHHHHcCCCcEEEEEEcC
Confidence 9999998776543 4789999999999998543
No 408
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.33 E-value=7.4e-07 Score=89.02 Aligned_cols=126 Identities=10% Similarity=0.120 Sum_probs=80.9
Q ss_pred eEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc----cc----cccccccC-CCCCCC-CCccceE
Q 005981 521 NVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR----GL----IGVMHDWC-EPFDTY-PRTYDLL 586 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er----Gl----ig~~~~~c-e~~~~y-p~tyDli 586 (666)
+|||+|||.|..+.+|++. +. .|+.+|. +.+++.+.++ |+ |.+.+.-. +..+.+ +.+||+|
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~-----~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V 133 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNT-----TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLV 133 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTS-----EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEE
T ss_pred CEEEEcCCchHHHHHHHHhCCCCC-----EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeE
Confidence 7999999999999999874 33 4566663 4566555442 43 33333222 223334 4899999
Q ss_pred EeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh------------hHHHHHHHHHHhcCcE----EEEEeccCCC
Q 005981 587 HAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI------------DVMDELQEIGKAMGWH----VTLRETAEGP 650 (666)
Q Consensus 587 ha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~------------~~~~~~~~i~~~l~W~----~~~~~~~~~~ 650 (666)
.++.. .-....++.++.|+|||||++++.|.. .....++++.+.+++. +.+....
T Consensus 134 ~~d~~------~~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~g--- 204 (221)
T 3dr5_A 134 FGQVS------PMDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLPLG--- 204 (221)
T ss_dssp EECCC------TTTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEESST---
T ss_pred EEcCc------HHHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEeecc---
Confidence 88632 234568999999999999999995321 1233456666666554 4443333
Q ss_pred CCceEEEEEEeCC
Q 005981 651 HASYRILTADKRL 663 (666)
Q Consensus 651 ~~~e~~l~~~k~~ 663 (666)
..+++++|.+
T Consensus 205 ---dGl~~~~~~~ 214 (221)
T 3dr5_A 205 ---AGLTVVTKAL 214 (221)
T ss_dssp ---TCEEEEEECC
T ss_pred ---chHHHHHHHH
Confidence 4589999875
No 409
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.33 E-value=1.1e-06 Score=88.35 Aligned_cols=112 Identities=13% Similarity=0.148 Sum_probs=78.5
Q ss_pred HhcccCCCceeeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc----cc---cccc-cccCCCCC
Q 005981 510 RALHWKKMKLRNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVM-HDWCEPFD 577 (666)
Q Consensus 510 ~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~-~~~ce~~~ 577 (666)
..+++..+ ..|||+|||.|.++.+|++. +. .|+.+|. +.+++.+.++ |+ +.+. .|..+.++
T Consensus 87 ~~~~~~~~--~~vldiG~G~G~~~~~l~~~~~~~~-----~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 159 (255)
T 3mb5_A 87 AYAGISPG--DFIVEAGVGSGALTLFLANIVGPEG-----RVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIE 159 (255)
T ss_dssp HHTTCCTT--CEEEEECCTTSHHHHHHHHHHCTTS-----EEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCC
T ss_pred HhhCCCCC--CEEEEecCCchHHHHHHHHHhCCCe-----EEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccC
Confidence 34455444 35999999999999999987 44 5666664 5677776665 54 3333 34433322
Q ss_pred CCCCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe-ChhHHHHHHHHHHhcC
Q 005981 578 TYPRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD-SIDVMDELQEIGKAMG 638 (666)
Q Consensus 578 ~yp~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d-~~~~~~~~~~i~~~l~ 638 (666)
+.+||+|.++ .-+...++.++.|+|||||.+++.. ..+...++.+.++...
T Consensus 160 --~~~~D~v~~~--------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 160 --EENVDHVILD--------LPQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp --CCSEEEEEEC--------SSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred --CCCcCEEEEC--------CCCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 2789999885 2233578999999999999999975 4556777777777766
No 410
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.32 E-value=9e-08 Score=89.67 Aligned_cols=94 Identities=16% Similarity=0.238 Sum_probs=64.8
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc-cccccccCCC-CCCCC---CccceEEec
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL-IGVMHDWCEP-FDTYP---RTYDLLHAA 589 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl-ig~~~~~ce~-~~~yp---~tyDliha~ 589 (666)
.+|||+|||.|.++.+|++++. +|+.+|. +.+++.+.++ |+ +.+++.-.+. .+..+ .+||+|.++
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEGW-----EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTTC-----EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEeCCCcCHHHHHHHHCCC-----eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 3599999999999999999976 3677774 5667666553 33 3333333222 11122 389999999
Q ss_pred cccccCCCCCCHHHHHHHhh--hcccCCeEEEEEeC
Q 005981 590 GLFSVESKRCNMSTIMLEMD--RMLRPGGHVYIRDS 623 (666)
Q Consensus 590 ~~f~~~~~~c~~~~~l~E~d--RiLRPgG~~ii~d~ 623 (666)
..|. . ..+.++.++. |+|||||.+++...
T Consensus 118 ~~~~--~---~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 118 PPYA--M---DLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp CCTT--S---CTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred CCCc--h---hHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 7776 2 2346677776 99999999999743
No 411
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.31 E-value=1.1e-06 Score=89.06 Aligned_cols=99 Identities=16% Similarity=0.176 Sum_probs=64.5
Q ss_pred cccCCCceeeEeeccccchHHHHHHhhC----CCceEEEEeeccCCCCChhHHH----hcc-ccccccccCCC--CCCCC
Q 005981 512 LHWKKMKLRNVLDMRAGFGGFAAALIEQ----KFDCWVMNVVPVSGFNTLPVIY----DRG-LIGVMHDWCEP--FDTYP 580 (666)
Q Consensus 512 l~~~~~~iRnvlD~g~G~Ggfaa~L~~~----~~~vwvmnv~~~~~~~~l~~~~----erG-lig~~~~~ce~--~~~yp 580 (666)
++++.|.. |||+|||.|.++.+|++. | .|+...+. +.+++.+. +++ +..+..+-+.+ .+..+
T Consensus 73 l~ikpG~~--VldlG~G~G~~~~~la~~VG~~G-~V~avD~s----~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~ 145 (233)
T 4df3_A 73 LPVKEGDR--ILYLGIASGTTASHMSDIIGPRG-RIYGVEFA----PRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLV 145 (233)
T ss_dssp CCCCTTCE--EEEETCTTSHHHHHHHHHHCTTC-EEEEEECC----HHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTC
T ss_pred cCCCCCCE--EEEecCcCCHHHHHHHHHhCCCc-eEEEEeCC----HHHHHHHHHhhHhhcCeeEEEEeccCcccccccc
Confidence 45777764 999999999999999875 4 24444443 34554443 343 33344444332 12223
Q ss_pred CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 581 RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 581 ~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
.++|+|.+. +.+.. +...+|.|+.|+|||||.++|.+
T Consensus 146 ~~vDvVf~d--~~~~~---~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 146 EGVDGLYAD--VAQPE---QAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp CCEEEEEEC--CCCTT---HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEEEEe--ccCCh---hHHHHHHHHHHhccCCCEEEEEE
Confidence 889998875 22222 33689999999999999999963
No 412
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.31 E-value=2.1e-06 Score=94.58 Aligned_cols=116 Identities=15% Similarity=0.137 Sum_probs=79.3
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhcc-----------------CCeEEEeCCcchHHHHHHHHHHHc
Q 005981 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP-----------------RNVITMSIAPKDVHENQIQFALER 318 (666)
Q Consensus 256 ~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~-----------------~~V~gvDiS~~~l~~a~~~~a~~r 318 (666)
+.+++.+.+.+.. ....+|||.|||+|.++..+.+ .+++|+|+++.++..|+.+... +
T Consensus 157 ~~v~~~mv~~l~~----~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l-~ 231 (445)
T 2okc_A 157 RPLIQAMVDCINP----QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYL-H 231 (445)
T ss_dssp HHHHHHHHHHHCC----CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHH-T
T ss_pred HHHHHHHHHHhCC----CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHH-h
Confidence 3456666665542 3446899999999988766542 3799999999988777654443 4
Q ss_pred CC---CceEEeecccCCCCCCCCeeEEEeccccccccc-C---------------hHHHHHHHHHhccCCeEEEEEEC
Q 005981 319 GA---PAMVAAFATRRLPYPSQAFDLIHCSRCRINWTR-D---------------DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 319 g~---~~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~~-d---------------~~~~L~el~RvLkPGG~lv~st~ 377 (666)
++ ...+...|+...+.. ..||+|+++..+.+... + ...++..+.++|||||.+++..+
T Consensus 232 g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 232 GIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp TCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 54 334555555444433 48999998765443211 1 12789999999999999998864
No 413
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.30 E-value=3.7e-07 Score=87.91 Aligned_cols=98 Identities=20% Similarity=0.264 Sum_probs=69.1
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCC-CC-CCccceEEecc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFD-TY-PRTYDLLHAAG 590 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~-~y-p~tyDliha~~ 590 (666)
..|||+|||+|.++.+++++|.. .|+.+|. +.+++.+.++ |+ +.+.+...+.+. .+ +.+||+|.++.
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~~~----~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRGAA----SVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS----EEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CEEEEeCCCcCHHHHHHHHCCCC----eEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 35999999999999988888642 4666663 5667666554 44 444444433322 13 48999999987
Q ss_pred ccccCCCCCCHHHHHHHhhh--cccCCeEEEEEeC
Q 005981 591 LFSVESKRCNMSTIMLEMDR--MLRPGGHVYIRDS 623 (666)
Q Consensus 591 ~f~~~~~~c~~~~~l~E~dR--iLRPgG~~ii~d~ 623 (666)
.|.+.. .++..++.++.| +|+|||.+++...
T Consensus 122 p~~~~~--~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 122 PYNVDS--ADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp CTTSCH--HHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred CCCcch--hhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 665431 245789999999 9999999999754
No 414
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.30 E-value=5.2e-07 Score=96.84 Aligned_cols=97 Identities=12% Similarity=0.157 Sum_probs=66.9
Q ss_pred CCceeeEeeccccchHHHHHHhhC--CCceEEEEeeccCCCCChhHHHhccccccc-cccCCCCCCCCCccceEEecccc
Q 005981 516 KMKLRNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSGFNTLPVIYDRGLIGVM-HDWCEPFDTYPRTYDLLHAAGLF 592 (666)
Q Consensus 516 ~~~iRnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~~~~l~~~~erGlig~~-~~~ce~~~~yp~tyDliha~~~f 592 (666)
....+.|||+|||.|.++.+|+++ +..+ +-+|.+.+++.+.++.-+.+. +|..+ .+|.. |+|++..++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~-----~~~D~~~~~~~a~~~~~v~~~~~d~~~---~~p~~-D~v~~~~vl 271 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINA-----INFDLPHVIQDAPAFSGVEHLGGDMFD---GVPKG-DAIFIKWIC 271 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEE-----EEEECHHHHTTCCCCTTEEEEECCTTT---CCCCC-SEEEEESCG
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEE-----EEEehHHHHHhhhhcCCCEEEecCCCC---CCCCC-CEEEEechh
Confidence 345678999999999999999886 3323 333333334333333334443 44433 45654 999999998
Q ss_pred ccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 593 SVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
.++.+. +...+|.++.|+|||||+++|.|
T Consensus 272 h~~~~~-~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 272 HDWSDE-HCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp GGBCHH-HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcCCHH-HHHHHHHHHHHHcCCCCEEEEEE
Confidence 877653 23589999999999999999975
No 415
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.30 E-value=3.3e-06 Score=88.41 Aligned_cols=88 Identities=9% Similarity=0.003 Sum_probs=65.9
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY 334 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf 334 (666)
.+++.+.+.+.. .+..+|||||||+|.++..|++. +|+++|+++.++..++.... . .....+...|+..+++
T Consensus 37 ~i~~~Iv~~l~~----~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~-~-~~~v~vi~gD~l~~~~ 110 (295)
T 3gru_A 37 NFVNKAVESANL----TKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE-L-YNNIEIIWGDALKVDL 110 (295)
T ss_dssp HHHHHHHHHTTC----CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHH-H-CSSEEEEESCTTTSCG
T ss_pred HHHHHHHHhcCC----CCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhc-c-CCCeEEEECchhhCCc
Confidence 456677776652 34579999999999999999875 89999999999988765554 2 2234556667888888
Q ss_pred CCCCeeEEEeccccccc
Q 005981 335 PSQAFDLIHCSRCRINW 351 (666)
Q Consensus 335 ~d~sFDlVv~s~~l~h~ 351 (666)
++.+||.|+++.. .++
T Consensus 111 ~~~~fD~Iv~NlP-y~i 126 (295)
T 3gru_A 111 NKLDFNKVVANLP-YQI 126 (295)
T ss_dssp GGSCCSEEEEECC-GGG
T ss_pred ccCCccEEEEeCc-ccc
Confidence 8788999997643 454
No 416
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.29 E-value=1.4e-06 Score=94.39 Aligned_cols=108 Identities=19% Similarity=0.205 Sum_probs=74.3
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHcCCCceEEeeccc
Q 005981 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAPAMVAAFATR 330 (666)
Q Consensus 256 ~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e 330 (666)
+..++.+.+.+.. ....+|||+|||+|.++..+++ .+++|+|+++.++..+ ....+...|..
T Consensus 25 ~~l~~~~~~~~~~----~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~ 91 (421)
T 2ih2_A 25 PEVVDFMVSLAEA----PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILADFL 91 (421)
T ss_dssp HHHHHHHHHHCCC----CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESCGG
T ss_pred HHHHHHHHHhhcc----CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCChh
Confidence 4566677777652 2346999999999999888874 2899999999876433 12334455555
Q ss_pred CCCCCCCCeeEEEeccccccccc---------C-------------------hHHHHHHHHHhccCCeEEEEEEC
Q 005981 331 RLPYPSQAFDLIHCSRCRINWTR---------D-------------------DGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 331 ~Lpf~d~sFDlVv~s~~l~h~~~---------d-------------------~~~~L~el~RvLkPGG~lv~st~ 377 (666)
... +.+.||+|+++-....... + ...++..+.++|+|||.+++..+
T Consensus 92 ~~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 92 LWE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp GCC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 544 3478999998633222111 1 11568889999999999999865
No 417
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.28 E-value=5.6e-07 Score=96.46 Aligned_cols=97 Identities=14% Similarity=0.103 Sum_probs=65.5
Q ss_pred ceeeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCChhHHHhccccccc-cccCCCCCCCCCccceEEeccccccCC
Q 005981 518 KLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTLPVIYDRGLIGVM-HDWCEPFDTYPRTYDLLHAAGLFSVES 596 (666)
Q Consensus 518 ~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l~~~~erGlig~~-~~~ce~~~~yp~tyDliha~~~f~~~~ 596 (666)
....|||+|||.|.++.+|+++.-++. ++.+|.+.+++.+.+..-+.+. +|..+ .+|. ||+|.+..++.++.
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~---~~~~D~~~~~~~a~~~~~v~~~~~d~~~---~~~~-~D~v~~~~~lh~~~ 281 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIK---GINFDLPQVIENAPPLSGIEHVGGDMFA---SVPQ-GDAMILKAVCHNWS 281 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCE---EEEEECHHHHTTCCCCTTEEEEECCTTT---CCCC-EEEEEEESSGGGSC
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCe---EEEeChHHHHHhhhhcCCCEEEeCCccc---CCCC-CCEEEEecccccCC
Confidence 456799999999999999998742322 2323322333333222113333 44433 3555 99999999998876
Q ss_pred CCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 597 KRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 597 ~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
+. ....+|.++.|+|||||+++|.|
T Consensus 282 d~-~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 282 DE-KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp HH-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HH-HHHHHHHHHHHhcCCCCEEEEEE
Confidence 53 22489999999999999999974
No 418
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.28 E-value=5.2e-07 Score=89.27 Aligned_cols=134 Identities=13% Similarity=0.076 Sum_probs=80.7
Q ss_pred eeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccC-CCCCCCC-----Cc
Q 005981 520 RNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWC-EPFDTYP-----RT 582 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~c-e~~~~yp-----~t 582 (666)
++|||+|||.|.++.+|++. +. .|+.+|. +.+++.+.++ |+ +.+.+... +.++.++ .+
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~ 134 (221)
T 3u81_A 60 SLVLELGAYCGYSAVRMARLLQPGA-----RLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDT 134 (221)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTC-----EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCC
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCC-----EEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCc
Confidence 57999999999999999984 44 4566663 5667666553 54 44443332 3233344 69
Q ss_pred cceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeChh--HHHHHHHHHHhcCcEEEEEec-cCCCCCceEEEEE
Q 005981 583 YDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSID--VMDELQEIGKAMGWHVTLRET-AEGPHASYRILTA 659 (666)
Q Consensus 583 yDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~--~~~~~~~i~~~l~W~~~~~~~-~~~~~~~e~~l~~ 659 (666)
||+|.++....++.+ ...++.++ |+|||||.+++.|... ...-++.+.+.=+|+...... .........+.++
T Consensus 135 fD~V~~d~~~~~~~~---~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~ 210 (221)
T 3u81_A 135 LDMVFLDHWKDRYLP---DTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKA 210 (221)
T ss_dssp CSEEEECSCGGGHHH---HHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHHCTTEEEEEEEEEETTTTEEEEEEEE
T ss_pred eEEEEEcCCcccchH---HHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhhCCCceEEEcccccccCCCCCceEEE
Confidence 999998854443321 12566677 9999999999976431 122223333344566665432 1112234567777
Q ss_pred EeC
Q 005981 660 DKR 662 (666)
Q Consensus 660 ~k~ 662 (666)
+++
T Consensus 211 ~~~ 213 (221)
T 3u81_A 211 IYQ 213 (221)
T ss_dssp EEC
T ss_pred EEe
Confidence 653
No 419
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.28 E-value=3.1e-08 Score=100.24 Aligned_cols=110 Identities=15% Similarity=0.157 Sum_probs=69.4
Q ss_pred HHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCCC
Q 005981 258 YLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPYP 335 (666)
Q Consensus 258 ~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf~ 335 (666)
.++.+.+.+.. ....+|||||||+|.++..+++. +|+|+|+++.++..++.+.. ......+...|+..++++
T Consensus 17 ~~~~i~~~~~~----~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~ 90 (245)
T 1yub_A 17 VLNQIIKQLNL----KETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQFP 90 (245)
T ss_dssp THHHHHHHCCC----CSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTCC
T ss_pred HHHHHHHhcCC----CCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCcc
Confidence 35566666542 34578999999999999888865 89999999988755432221 111234555577788776
Q ss_pred C-CCeeEEEecccccccc-----------cChHHHH----HHHHHhccCCeEEEEE
Q 005981 336 S-QAFDLIHCSRCRINWT-----------RDDGILL----LEVNRMLRAGGYFAWA 375 (666)
Q Consensus 336 d-~sFDlVv~s~~l~h~~-----------~d~~~~L----~el~RvLkPGG~lv~s 375 (666)
+ ++| .|+++.. .+.. .....++ ..+.|+|+|||.+.+.
T Consensus 91 ~~~~f-~vv~n~P-y~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 91 NKQRY-KIVGNIP-YHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp CSSEE-EEEEECC-SSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred cCCCc-EEEEeCC-ccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 4 689 6665532 2211 1222333 5577888888776554
No 420
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.27 E-value=1.2e-06 Score=92.33 Aligned_cols=124 Identities=17% Similarity=0.084 Sum_probs=80.5
Q ss_pred hcccCCCceeeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCCCCC
Q 005981 511 ALHWKKMKLRNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFDTYP 580 (666)
Q Consensus 511 ~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~~yp 580 (666)
.+++..+. .|||+|||.|+++.+|++. +. .|+.+|. +.+++.+.++ |+ +.+.+...+.++.++
T Consensus 113 ~l~~~~g~--~VLDlg~G~G~~t~~la~~~~~~~-----~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~ 185 (315)
T 1ixk_A 113 ALDPKPGE--IVADMAAAPGGKTSYLAQLMRNDG-----VIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELN 185 (315)
T ss_dssp HHCCCTTC--EEEECCSSCSHHHHHHHHHTTTCS-----EEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGC
T ss_pred HhCCCCCC--EEEEeCCCCCHHHHHHHHHhCCCC-----EEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccccc
Confidence 44555553 5999999999999999874 12 4666663 5666666554 55 445544444444446
Q ss_pred CccceEEeccccccCC---CC------CC----------HHHHHHHhhhcccCCeEEEEEe----ChhHHHHHHHHHHhc
Q 005981 581 RTYDLLHAAGLFSVES---KR------CN----------MSTIMLEMDRMLRPGGHVYIRD----SIDVMDELQEIGKAM 637 (666)
Q Consensus 581 ~tyDliha~~~f~~~~---~~------c~----------~~~~l~E~dRiLRPgG~~ii~d----~~~~~~~~~~i~~~l 637 (666)
.+||+|.++--.+..+ .. -. ...+|.++.|+|||||.++++. ..+....++.++++.
T Consensus 186 ~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~ 265 (315)
T 1ixk_A 186 VEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNF 265 (315)
T ss_dssp CCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHS
T ss_pred ccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcC
Confidence 7899999853322111 00 00 1388999999999999999962 234455677777776
Q ss_pred CcEE
Q 005981 638 GWHV 641 (666)
Q Consensus 638 ~W~~ 641 (666)
.++.
T Consensus 266 ~~~~ 269 (315)
T 1ixk_A 266 DVEL 269 (315)
T ss_dssp SEEE
T ss_pred CCEE
Confidence 6554
No 421
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.27 E-value=2.5e-06 Score=87.39 Aligned_cols=114 Identities=16% Similarity=0.134 Sum_probs=80.2
Q ss_pred HhcccCCCceeeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc----cc---cccc-cccCCCCC
Q 005981 510 RALHWKKMKLRNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVM-HDWCEPFD 577 (666)
Q Consensus 510 ~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~-~~~ce~~~ 577 (666)
..+.+..+. +|||+|||.|.++.+|++. +. +|+.+|. +.+++.+.++ |+ +.+. .|..+.
T Consensus 106 ~~~~~~~~~--~VLDiG~G~G~~~~~la~~~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 176 (277)
T 1o54_A 106 MMLDVKEGD--RIIDTGVGSGAMCAVLARAVGSSG-----KVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-- 176 (277)
T ss_dssp HHTTCCTTC--EEEEECCTTSHHHHHHHHHTTTTC-----EEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC--
T ss_pred HHhCCCCCC--EEEEECCcCCHHHHHHHHHhCCCc-----EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc--
Confidence 344555443 6999999999999999887 33 5666763 5677777665 44 3333 333332
Q ss_pred CCC-CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC-hhHHHHHHHHHHhcCcEE
Q 005981 578 TYP-RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS-IDVMDELQEIGKAMGWHV 641 (666)
Q Consensus 578 ~yp-~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~-~~~~~~~~~i~~~l~W~~ 641 (666)
++ .+||+|.++. -+...+|.++.|+|||||.+++.+. .+...++.+.++...|..
T Consensus 177 -~~~~~~D~V~~~~--------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~ 233 (277)
T 1o54_A 177 -FDEKDVDALFLDV--------PDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIR 233 (277)
T ss_dssp -CSCCSEEEEEECC--------SCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEE
T ss_pred -ccCCccCEEEECC--------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 44 7899999851 1235889999999999999999876 346677777777777764
No 422
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.26 E-value=1.3e-06 Score=94.46 Aligned_cols=112 Identities=19% Similarity=0.184 Sum_probs=77.8
Q ss_pred HHHHHHHHhcc----cCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCCh----hHHHhccc---cccccc
Q 005981 503 EIIESYVRALH----WKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTL----PVIYDRGL---IGVMHD 571 (666)
Q Consensus 503 ~~v~~Y~~~l~----~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l----~~~~erGl---ig~~~~ 571 (666)
.|...|.+.+- .-.|+ .|||+|||+|.++...++.|+. .|+.++...++ +++.+.|+ |.+++.
T Consensus 66 ~Rt~aY~~Ai~~~~~~~~~k--~VLDvG~GtGiLs~~Aa~aGA~----~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~ 139 (376)
T 4hc4_A 66 VRTDAYRLGILRNWAALRGK--TVLDVGAGTGILSIFCAQAGAR----RVYAVEASAIWQQAREVVRFNGLEDRVHVLPG 139 (376)
T ss_dssp HHHHHHHHHHHTTHHHHTTC--EEEEETCTTSHHHHHHHHTTCS----EEEEEECSTTHHHHHHHHHHTTCTTTEEEEES
T ss_pred HHHHHHHHHHHhCHHhcCCC--EEEEeCCCccHHHHHHHHhCCC----EEEEEeChHHHHHHHHHHHHcCCCceEEEEee
Confidence 34445655432 22344 4999999999998877877753 34445543444 44455677 778888
Q ss_pred cCCCCCCCCCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEE
Q 005981 572 WCEPFDTYPRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIR 621 (666)
Q Consensus 572 ~ce~~~~yp~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~ 621 (666)
-.|.+. .|..+|+|-|.-+-..+.....++.++...+|+|||||.+|-+
T Consensus 140 ~~~~~~-lpe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 140 PVETVE-LPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp CTTTCC-CSSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred eeeeec-CCccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCc
Confidence 777764 5789999998644444444456789999999999999998863
No 423
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.26 E-value=1.8e-07 Score=88.88 Aligned_cols=97 Identities=19% Similarity=0.231 Sum_probs=65.7
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCC-CCCCCCccceEEecc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEP-FDTYPRTYDLLHAAG 590 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~-~~~yp~tyDliha~~ 590 (666)
.+|||+|||.|.++.+|+++|. .+|+.+|. +.+++.+.++ |+ +.+.+.-.+. ++..+..||+|.++.
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~~~----~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSRGM----SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC----CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred CeEEEeCCCCCHHHHHHHHcCC----CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 3699999999999999998853 25677774 5677666553 33 3333322222 233457899999986
Q ss_pred ccccCCCCCCHHHHHHHhh--hcccCCeEEEEEeCh
Q 005981 591 LFSVESKRCNMSTIMLEMD--RMLRPGGHVYIRDSI 624 (666)
Q Consensus 591 ~f~~~~~~c~~~~~l~E~d--RiLRPgG~~ii~d~~ 624 (666)
.|.. ...+.++.++. |+|+|||.+++....
T Consensus 109 ~~~~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 109 PYAK----ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp SSHH----HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCc----chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 6532 22356777776 999999999997443
No 424
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.26 E-value=7.8e-07 Score=87.91 Aligned_cols=126 Identities=18% Similarity=0.124 Sum_probs=81.1
Q ss_pred eeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccC-CCCCCCC-----Cc
Q 005981 520 RNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWC-EPFDTYP-----RT 582 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~c-e~~~~yp-----~t 582 (666)
.+|||+|||.|.++.+|++. +. .|+.+|. +.+++.+.++ |+ +.+.+... +.+...+ .+
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~~~~-----~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~ 145 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALPADG-----RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGT 145 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTC-----EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCC-----EEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCC
Confidence 47999999999999999985 33 4555653 5666666554 54 33333221 1111121 68
Q ss_pred cceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh------------hHHHHHHHH----HHhcCcEEEEEec
Q 005981 583 YDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI------------DVMDELQEI----GKAMGWHVTLRET 646 (666)
Q Consensus 583 yDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~------------~~~~~~~~i----~~~l~W~~~~~~~ 646 (666)
||+|.++.. ......++.++-|+|||||.+++.+.. .....++++ .+.=++++.+...
T Consensus 146 ~D~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~ 219 (229)
T 2avd_A 146 FDVAVVDAD------KENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPL 219 (229)
T ss_dssp EEEEEECSC------STTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEECS
T ss_pred ccEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEec
Confidence 999998732 345578999999999999999996421 123333333 4445577776655
Q ss_pred cCCCCCceEEEEEEeC
Q 005981 647 AEGPHASYRILTADKR 662 (666)
Q Consensus 647 ~~~~~~~e~~l~~~k~ 662 (666)
.+ .+++++|.
T Consensus 220 ~d------Gl~~~~k~ 229 (229)
T 2avd_A 220 GD------GLTLAFKI 229 (229)
T ss_dssp TT------CEEEEEEC
T ss_pred CC------ceEEEEEC
Confidence 44 48888874
No 425
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.25 E-value=9.3e-07 Score=88.53 Aligned_cols=127 Identities=16% Similarity=0.153 Sum_probs=80.8
Q ss_pred eeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccC-CCCC----------
Q 005981 520 RNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWC-EPFD---------- 577 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~c-e~~~---------- 577 (666)
.+|||+|||.|.++.+|++. +. +|+.+|. +.+++.+.++ |+ +.+.+... +..+
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~-----~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDG-----KILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTC-----EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCC-----EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccc
Confidence 36999999999999999887 34 4555553 4566666554 44 32322211 1111
Q ss_pred ---CC--C-CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC------------hhHHHHH----HHHHH
Q 005981 578 ---TY--P-RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS------------IDVMDEL----QEIGK 635 (666)
Q Consensus 578 ---~y--p-~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~------------~~~~~~~----~~i~~ 635 (666)
.| + .+||+|.+... .-.+..++.++.|+|||||.+++.+. ......+ +.+.+
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 210 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDAD------KENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYN 210 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCcCEEEEeCC------HHHHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHhh
Confidence 11 2 68999998732 22346889999999999999999751 1122233 33445
Q ss_pred hcCcEEEEEeccCCCCCceEEEEEEeCC
Q 005981 636 AMGWHVTLRETAEGPHASYRILTADKRL 663 (666)
Q Consensus 636 ~l~W~~~~~~~~~~~~~~e~~l~~~k~~ 663 (666)
.-++.+......+| +.+++|++
T Consensus 211 ~~~~~~~~~p~~~g------~~~~~~~~ 232 (239)
T 2hnk_A 211 DSLVDVSLVPIADG------VSLVRKRL 232 (239)
T ss_dssp CTTEEEEEECSTTC------EEEEEECC
T ss_pred CCCeEEEEEEcCCc------eEeeeehh
Confidence 55677777665444 88888875
No 426
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.25 E-value=1.1e-06 Score=91.95 Aligned_cols=139 Identities=15% Similarity=0.129 Sum_probs=84.2
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhcc------c----cccccccCCCCCC--CCCccceE
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRG------L----IGVMHDWCEPFDT--YPRTYDLL 586 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erG------l----ig~~~~~ce~~~~--yp~tyDli 586 (666)
.+|||+|||.|+++.+|++.. ++ ..|+.+|. +.+++.+.++- + +.+.......+.. -+++||+|
T Consensus 97 ~~VLdiG~G~G~~~~~l~~~~-~~--~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 97 ERVLIIGGGDGGVLREVLRHG-TV--EHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp CEEEEEECTTSHHHHHHHTCT-TC--CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CeEEEEcCCCCHHHHHHHhCC-CC--CEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 679999999999999999872 11 24555553 46666665532 1 3333332222221 14799999
Q ss_pred EeccccccCCCCCC-HHHHHHHhhhcccCCeEEEEEeCh-----hHHHHHHHHHHhcCcEE-EEEeccCCC---CCceEE
Q 005981 587 HAAGLFSVESKRCN-MSTIMLEMDRMLRPGGHVYIRDSI-----DVMDELQEIGKAMGWHV-TLRETAEGP---HASYRI 656 (666)
Q Consensus 587 ha~~~f~~~~~~c~-~~~~l~E~dRiLRPgG~~ii~d~~-----~~~~~~~~i~~~l~W~~-~~~~~~~~~---~~~e~~ 656 (666)
.++.........-. -..++.++.|+|||||.+++.... .....+.+.+++..+.. ..... .-| .+...+
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~-~vP~yp~g~w~f 252 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALM-HVPTYPCGSIGT 252 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEEC-CCTTSTTSCCEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEe-ecccccCcceEE
Confidence 99643322111111 158899999999999999996322 35666777777776653 33322 212 345678
Q ss_pred EEEEeC
Q 005981 657 LTADKR 662 (666)
Q Consensus 657 l~~~k~ 662 (666)
++|.|.
T Consensus 253 ~~as~~ 258 (304)
T 3bwc_A 253 LVCSKK 258 (304)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 888885
No 427
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.24 E-value=8.7e-07 Score=95.03 Aligned_cols=97 Identities=14% Similarity=0.108 Sum_probs=67.0
Q ss_pred CCceeeEeeccccchHHHHHHhhC--CCceEEEEeeccCCCCChhHHHhccccccc-cccCCCCCCCCCccceEEecccc
Q 005981 516 KMKLRNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSGFNTLPVIYDRGLIGVM-HDWCEPFDTYPRTYDLLHAAGLF 592 (666)
Q Consensus 516 ~~~iRnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~~~~l~~~~erGlig~~-~~~ce~~~~yp~tyDliha~~~f 592 (666)
......|||+|||.|.++.+|+++ +..+.+ +|.+.+++.+.++.-+.+. +|..+ .+|.. |+|.+..++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~-----~D~~~~~~~a~~~~~v~~~~~D~~~---~~p~~-D~v~~~~vl 269 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVN-----FDLPHVISEAPQFPGVTHVGGDMFK---EVPSG-DTILMKWIL 269 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEE-----EECHHHHTTCCCCTTEEEEECCTTT---CCCCC-SEEEEESCG
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEE-----ecCHHHHHhhhhcCCeEEEeCCcCC---CCCCC-CEEEehHHh
Confidence 345678999999999999999885 332333 3333334333333334444 44433 45654 999999998
Q ss_pred ccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 593 SVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
.++.+. +...+|.++.|+|||||+++|.|
T Consensus 270 h~~~d~-~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 270 HDWSDQ-HCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp GGSCHH-HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccCCHH-HHHHHHHHHHHHcCCCCEEEEEE
Confidence 887643 33689999999999999999974
No 428
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.24 E-value=1.6e-06 Score=91.51 Aligned_cols=110 Identities=16% Similarity=0.114 Sum_probs=66.4
Q ss_pred hcccCCCceeeEeeccccchHHHHHHhhC-C--CceEEEEeeccCC-CCChhHHHhcc-----------------ccccc
Q 005981 511 ALHWKKMKLRNVLDMRAGFGGFAAALIEQ-K--FDCWVMNVVPVSG-FNTLPVIYDRG-----------------LIGVM 569 (666)
Q Consensus 511 ~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~-~--~~vwvmnv~~~~~-~~~l~~~~erG-----------------lig~~ 569 (666)
.+.+..+. .|||+|||.|.++.+|++. | . .|+.+|. +.+++.+.++. -+.+.
T Consensus 100 ~l~~~~g~--~VLDiG~G~G~~~~~la~~~g~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~ 172 (336)
T 2b25_A 100 MMDINPGD--TVLEAGSGSGGMSLFLSKAVGSQG-----RVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI 172 (336)
T ss_dssp HHTCCTTC--EEEEECCTTSHHHHHHHHHHCTTC-----EEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred hcCCCCCC--EEEEeCCCcCHHHHHHHHHhCCCc-----eEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEE
Confidence 34455453 6999999999999999886 4 3 4555553 45666665531 14444
Q ss_pred cccCCCC-CCCC-CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC-hhHHHHHHHHHH
Q 005981 570 HDWCEPF-DTYP-RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS-IDVMDELQEIGK 635 (666)
Q Consensus 570 ~~~ce~~-~~yp-~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~-~~~~~~~~~i~~ 635 (666)
+.-.+.. ..++ .+||+|.++.. ....++.++.|+|||||.+++... .+.+.++.+.++
T Consensus 173 ~~d~~~~~~~~~~~~fD~V~~~~~--------~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~ 233 (336)
T 2b25_A 173 HKDISGATEDIKSLTFDAVALDML--------NPHVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIR 233 (336)
T ss_dssp ESCTTCCC-------EEEEEECSS--------STTTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHH
T ss_pred ECChHHcccccCCCCeeEEEECCC--------CHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHH
Confidence 3333332 2344 68999998521 113478999999999999998754 333444444344
No 429
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.24 E-value=3.3e-06 Score=88.14 Aligned_cols=90 Identities=18% Similarity=0.056 Sum_probs=61.5
Q ss_pred CCCCeEEEECCCC------ch-hHHHhcc--CCeEEEeCCcchHHHHHHHHHHHcCCCceE-EeecccCCCCCCCCeeEE
Q 005981 273 HHIRVVMDAGCGV------AS-FGAYLLP--RNVITMSIAPKDVHENQIQFALERGAPAMV-AAFATRRLPYPSQAFDLI 342 (666)
Q Consensus 273 ~~~~~VLDIGCGt------G~-~a~~L~~--~~V~gvDiS~~~l~~a~~~~a~~rg~~~~~-~~~d~e~Lpf~d~sFDlV 342 (666)
.++.+|||+|||+ |+ .+..+.. .+|+|+|+++. + .+ ..+ ...|+..++++ ++||+|
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-v----------~~--v~~~i~gD~~~~~~~-~~fD~V 127 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-V----------SD--ADSTLIGDCATVHTA-NKWDLI 127 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-B----------CS--SSEEEESCGGGCCCS-SCEEEE
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-C----------CC--CEEEEECccccCCcc-CcccEE
Confidence 3457999999944 64 2333333 38999999986 1 12 234 55677777765 789999
Q ss_pred Eecccccccc-----c------ChHHHHHHHHHhccCCeEEEEEEC
Q 005981 343 HCSRCRINWT-----R------DDGILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 343 v~s~~l~h~~-----~------d~~~~L~el~RvLkPGG~lv~st~ 377 (666)
+|+.. .++. + ....+++++.|+|||||.|++..+
T Consensus 128 vsn~~-~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 128 ISDMY-DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp EECCC-CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEcCC-ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 97533 2221 1 123789999999999999999764
No 430
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.23 E-value=4.9e-07 Score=91.19 Aligned_cols=103 Identities=13% Similarity=0.123 Sum_probs=67.8
Q ss_pred eeEeeccccchHHHHHHhhC--CCceEEEEeeccCC-CCChhHHHhc-------cc------------------------
Q 005981 520 RNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIYDR-------GL------------------------ 565 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~er-------Gl------------------------ 565 (666)
..|||+|||+|.++..|++. . . ..+|+.+|. +.+++.+.++ |+
T Consensus 53 ~~vLD~gcGsG~~~~~la~~~~~-~--~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 53 VTLWDPCCGSGYLLTVLGLLHRR-S--LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp EEEEETTCTTSHHHHHHHHHTGG-G--EEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CeEEECCCCCCHHHHHHHHHhcc-C--CCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 56999999999999999876 1 1 136777773 5666666532 32
Q ss_pred ----cc-------------cc-cccCCCCCC----CCCccceEEeccccccCCCC------CCHHHHHHHhhhcccCCeE
Q 005981 566 ----IG-------------VM-HDWCEPFDT----YPRTYDLLHAAGLFSVESKR------CNMSTIMLEMDRMLRPGGH 617 (666)
Q Consensus 566 ----ig-------------~~-~~~ce~~~~----yp~tyDliha~~~f~~~~~~------c~~~~~l~E~dRiLRPgG~ 617 (666)
+. +. +|..+.+.. -...||+|.|+-.|...... -....++.++.|+|||||+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 22 33 333322210 12489999998666543321 2345899999999999999
Q ss_pred EEEEeChh
Q 005981 618 VYIRDSID 625 (666)
Q Consensus 618 ~ii~d~~~ 625 (666)
++|.+...
T Consensus 210 l~~~~~~~ 217 (250)
T 1o9g_A 210 IAVTDRSR 217 (250)
T ss_dssp EEEEESSS
T ss_pred EEEeCcch
Confidence 99976543
No 431
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.23 E-value=3.2e-08 Score=98.96 Aligned_cols=94 Identities=14% Similarity=0.168 Sum_probs=67.3
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCCCCCCCCccceEEeccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEPFDTYPRTYDLLHAAGL 591 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~~~~yp~tyDliha~~~ 591 (666)
..|||+|||.|+++.+|++.|. .|+.+|. +.++..+.++ |+ +.+.+...+.++ -+.+||+|.++..
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~ 153 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTGM-----RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPP 153 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCC
T ss_pred CEEEECccccCHHHHHHHHcCC-----EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCC
Confidence 3599999999999999999976 5566663 5666665543 43 444444333333 2379999999988
Q ss_pred cccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 592 FSVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 592 f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
|.+.... ...+.|+.|+|||||++++..
T Consensus 154 ~~~~~~~---~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 154 WGGPDYA---TAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp CSSGGGG---GSSSBCTTTSCSSCHHHHHHH
T ss_pred cCCcchh---hhHHHHHHhhcCCcceeHHHH
Confidence 8775543 236779999999999988764
No 432
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.23 E-value=8.6e-07 Score=94.20 Aligned_cols=119 Identities=15% Similarity=0.126 Sum_probs=77.4
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc----cccccccCCCCCCC----CCccceE
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL----IGVMHDWCEPFDTY----PRTYDLL 586 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl----ig~~~~~ce~~~~y----p~tyDli 586 (666)
..|||+|||+|+|+.++++.|. .|+.+|. +.+++.+.++ |+ +.+++..++.+... ..+||+|
T Consensus 155 ~~VLDlgcGtG~~sl~la~~ga-----~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAGA-----EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC-----EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CcEEEcccccCHHHHHHHHcCC-----EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 3699999999999999999876 6777774 5677766554 43 33444333322211 3689999
Q ss_pred Eeccc-cccCCC------CCCHHHHHHHhhhcccCCeEEEEEeC-------hhHHHHHHHHHHhcCcEEEE
Q 005981 587 HAAGL-FSVESK------RCNMSTIMLEMDRMLRPGGHVYIRDS-------IDVMDELQEIGKAMGWHVTL 643 (666)
Q Consensus 587 ha~~~-f~~~~~------~c~~~~~l~E~dRiLRPgG~~ii~d~-------~~~~~~~~~i~~~l~W~~~~ 643 (666)
.++-- |..... .-++..++.++.|+|||||++++... ....+.+++.++....++..
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~~ 300 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVAS 300 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEEE
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 88532 221110 11246889999999999999888531 22345556566677777653
No 433
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.22 E-value=5.9e-06 Score=82.34 Aligned_cols=115 Identities=16% Similarity=0.098 Sum_probs=77.8
Q ss_pred HHhcccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhc----cc---ccccc-ccCCCCCCC
Q 005981 509 VRALHWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDR----GL---IGVMH-DWCEPFDTY 579 (666)
Q Consensus 509 ~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~er----Gl---ig~~~-~~ce~~~~y 579 (666)
...+++..+. +|||+|||.|.++.+|++.+. +|+.+| ++.+++.+.++ |+ +.+.+ +..+.+ .-
T Consensus 84 ~~~~~~~~~~--~vldiG~G~G~~~~~l~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~ 155 (248)
T 2yvl_A 84 ALKLNLNKEK--RVLEFGTGSGALLAVLSEVAG-----EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE-VP 155 (248)
T ss_dssp HHHTTCCTTC--EEEEECCTTSHHHHHHHHHSS-----EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-CC
T ss_pred HHhcCCCCCC--EEEEeCCCccHHHHHHHHhCC-----EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-cC
Confidence 3444554443 699999999999999998754 566676 35677777665 43 33333 332222 01
Q ss_pred CCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC-hhHHHHHHHHHHhcCcE
Q 005981 580 PRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS-IDVMDELQEIGKAMGWH 640 (666)
Q Consensus 580 p~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~-~~~~~~~~~i~~~l~W~ 640 (666)
+..||+|.+. .-+...++.++.|+|||||.+++... .+...++.+.++.. |.
T Consensus 156 ~~~~D~v~~~--------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~ 208 (248)
T 2yvl_A 156 EGIFHAAFVD--------VREPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY-FG 208 (248)
T ss_dssp TTCBSEEEEC--------SSCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT-EE
T ss_pred CCcccEEEEC--------CcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CC
Confidence 2789999874 12345889999999999999999876 45666666666554 54
No 434
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.22 E-value=3e-06 Score=86.38 Aligned_cols=116 Identities=14% Similarity=0.105 Sum_probs=76.0
Q ss_pred HhcccCCCceeeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc-----c-c---cccccccCCCC
Q 005981 510 RALHWKKMKLRNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR-----G-L---IGVMHDWCEPF 576 (666)
Q Consensus 510 ~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er-----G-l---ig~~~~~ce~~ 576 (666)
..+.+..+. .|||+|||.|.++.+|++. +. +|+.+|. +.+++.+.++ | + +.+.+...+..
T Consensus 93 ~~~~~~~~~--~vLdiG~G~G~~~~~l~~~~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~ 165 (280)
T 1i9g_A 93 HEGDIFPGA--RVLEAGAGSGALTLSLLRAVGPAG-----QVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS 165 (280)
T ss_dssp HHTTCCTTC--EEEEECCTTSHHHHHHHHHHCTTS-----EEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC
T ss_pred HHcCCCCCC--EEEEEcccccHHHHHHHHHhCCCC-----EEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc
Confidence 344555443 5999999999999999885 34 5666664 5677776655 4 2 33443333333
Q ss_pred CCCCCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC-hhHHHHHHHHHHh-cCcE
Q 005981 577 DTYPRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS-IDVMDELQEIGKA-MGWH 640 (666)
Q Consensus 577 ~~yp~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~-~~~~~~~~~i~~~-l~W~ 640 (666)
..-+.+||+|.+.. -+...+|.++.|+|||||++++... .+.+.++...++. .+|.
T Consensus 166 ~~~~~~~D~v~~~~--------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 166 ELPDGSVDRAVLDM--------LAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp CCCTTCEEEEEEES--------SCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred CCCCCceeEEEECC--------cCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 21137899999851 2345889999999999999999754 3445555444444 5553
No 435
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.22 E-value=8e-06 Score=85.29 Aligned_cols=142 Identities=13% Similarity=0.067 Sum_probs=82.1
Q ss_pred ceeeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhcc-----------ccccccccCCCC-CCCCCccc
Q 005981 518 KLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDRG-----------LIGVMHDWCEPF-DTYPRTYD 584 (666)
Q Consensus 518 ~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~erG-----------lig~~~~~ce~~-~~yp~tyD 584 (666)
+-++|||+|||.|+.+.+|++.. ++ -.|+.+| .+.+++++.++- -+.+.+.....+ ...+++||
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~-~~--~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 159 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHK-NV--ESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCT-TC--CEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCC-CC--CEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCcc
Confidence 35689999999999999999872 11 2556666 367777776531 134443333332 22348999
Q ss_pred eEEeccccccCCCCCC--HHHHHHHhhhcccCCeEEEEEe-----ChhHHHHHHHHHHhcCcEEEEEec--cCCCCCceE
Q 005981 585 LLHAAGLFSVESKRCN--MSTIMLEMDRMLRPGGHVYIRD-----SIDVMDELQEIGKAMGWHVTLRET--AEGPHASYR 655 (666)
Q Consensus 585 liha~~~f~~~~~~c~--~~~~l~E~dRiLRPgG~~ii~d-----~~~~~~~~~~i~~~l~W~~~~~~~--~~~~~~~e~ 655 (666)
+|.++. +......-. ...++.++.|+|||||.+++.- ..+....+.+.+++.--.+..... ..-+.+...
T Consensus 160 vIi~D~-~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~ 238 (294)
T 3adn_A 160 VIISDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMT 238 (294)
T ss_dssp EEEECC-----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEEE
T ss_pred EEEECC-CCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCceE
Confidence 999853 222111111 1579999999999999999962 123344444434433333333221 111234567
Q ss_pred EEEEEeCC
Q 005981 656 ILTADKRL 663 (666)
Q Consensus 656 ~l~~~k~~ 663 (666)
+++|.|..
T Consensus 239 f~~as~~~ 246 (294)
T 3adn_A 239 FAWATDND 246 (294)
T ss_dssp EEEEESCT
T ss_pred EEEEeCCc
Confidence 88888864
No 436
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.22 E-value=2.3e-06 Score=86.67 Aligned_cols=106 Identities=15% Similarity=0.171 Sum_probs=66.8
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCC
Q 005981 256 DQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLP 333 (666)
Q Consensus 256 ~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lp 333 (666)
..+++.+.+.+.. ....+|||||||+|.++..|+++ +|+|+|+++.++..++.+... .....+...|+..++
T Consensus 16 ~~~~~~i~~~~~~----~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~~ 89 (244)
T 1qam_A 16 KHNIDKIMTNIRL----NEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQFK 89 (244)
T ss_dssp HHHHHHHHTTCCC----CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGGCC
T ss_pred HHHHHHHHHhCCC----CCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHhCC
Confidence 3556777776652 34579999999999999999875 899999999988766543321 123345566788888
Q ss_pred CCC-CCeeEEEecccccccccChHHHHHHHHHhccCCeEE
Q 005981 334 YPS-QAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYF 372 (666)
Q Consensus 334 f~d-~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~l 372 (666)
+++ ..|+ |+++. -+++. ...+..+.+....++.+
T Consensus 90 ~~~~~~~~-vv~nl-Py~~~---~~~l~~~l~~~~~~~~~ 124 (244)
T 1qam_A 90 FPKNQSYK-IFGNI-PYNIS---TDIIRKIVFDSIADEIY 124 (244)
T ss_dssp CCSSCCCE-EEEEC-CGGGH---HHHHHHHHHSCCCSEEE
T ss_pred cccCCCeE-EEEeC-CcccC---HHHHHHHHhcCCCCeEE
Confidence 764 4564 54443 34442 23444444433333333
No 437
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.21 E-value=5.2e-06 Score=88.62 Aligned_cols=139 Identities=15% Similarity=0.177 Sum_probs=93.5
Q ss_pred cCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCChhHHHhc---cc---cccc-cccCCCCCCCCCccceE
Q 005981 514 WKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTLPVIYDR---GL---IGVM-HDWCEPFDTYPRTYDLL 586 (666)
Q Consensus 514 ~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l~~~~er---Gl---ig~~-~~~ce~~~~yp~tyDli 586 (666)
..+...+.|+|+|||.|.++.+|+++--++ .++-.|.+..++.+.++ +. |.+. +|. |..-+..+|++
T Consensus 175 ~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~---~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~---~~~~~~~~D~~ 248 (353)
T 4a6d_A 175 FDLSVFPLMCDLGGGAGALAKECMSLYPGC---KITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDF---FKDPLPEADLY 248 (353)
T ss_dssp SCGGGCSEEEEETCTTSHHHHHHHHHCSSC---EEEEEECHHHHHHHHHHSCC--CCSEEEEESCT---TTSCCCCCSEE
T ss_pred cCcccCCeEEeeCCCCCHHHHHHHHhCCCc---eeEeccCHHHHHHHHHhhhhcccCceeeecCcc---ccCCCCCceEE
Confidence 345677889999999999999999882122 22333444556555443 11 4333 444 32222568999
Q ss_pred EeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh--------------h------------HHHHHHHHHHhcCcE
Q 005981 587 HAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI--------------D------------VMDELQEIGKAMGWH 640 (666)
Q Consensus 587 ha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~--------------~------------~~~~~~~i~~~l~W~ 640 (666)
.+..++..+.+. ....+|.++.|.|+|||.++|-|.. + ..++.++++++-.|+
T Consensus 249 ~~~~vlh~~~d~-~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~ 327 (353)
T 4a6d_A 249 ILARVLHDWADG-KCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFR 327 (353)
T ss_dssp EEESSGGGSCHH-HHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCE
T ss_pred EeeeecccCCHH-HHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCc
Confidence 999999887753 2258999999999999999997531 0 135678889999998
Q ss_pred EEEEeccCCCCCceEEEEEEeC
Q 005981 641 VTLRETAEGPHASYRILTADKR 662 (666)
Q Consensus 641 ~~~~~~~~~~~~~e~~l~~~k~ 662 (666)
......-. ....+++|+|.
T Consensus 328 ~v~v~~~~---~~~~~i~ArKg 346 (353)
T 4a6d_A 328 DFQFKKTG---AIYDAILARKG 346 (353)
T ss_dssp EEEEECCS---SSCEEEEEECC
T ss_pred eEEEEEcC---CceEEEEEEec
Confidence 65433222 34678999995
No 438
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.21 E-value=1.2e-06 Score=85.60 Aligned_cols=100 Identities=19% Similarity=0.115 Sum_probs=66.4
Q ss_pred HHhcccCCCceeeEeeccccchHHHHHHhhCC---CceEEEEeeccCC-CCChhHHHhc----cc--cccccc-cCCCCC
Q 005981 509 VRALHWKKMKLRNVLDMRAGFGGFAAALIEQK---FDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHD-WCEPFD 577 (666)
Q Consensus 509 ~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~---~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~-~ce~~~ 577 (666)
.+.+.+..+ .+|||+|||.|.+++.|++.+ . +|+.+|. +.+++.+.++ |+ +.+.+. ..+.+.
T Consensus 70 ~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 142 (215)
T 2yxe_A 70 CELLDLKPG--MKVLEIGTGCGYHAAVTAEIVGEDG-----LVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE 142 (215)
T ss_dssp HHHTTCCTT--CEEEEECCTTSHHHHHHHHHHCTTS-----EEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG
T ss_pred HHhhCCCCC--CEEEEECCCccHHHHHHHHHhCCCC-----EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC
Confidence 344444444 369999999999999998873 4 4555553 5667666654 33 333322 222121
Q ss_pred CCCCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeChh
Q 005981 578 TYPRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSID 625 (666)
Q Consensus 578 ~yp~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~ 625 (666)
-+.+||+|.+...+.+.. .++.|+|||||.+++.-...
T Consensus 143 -~~~~fD~v~~~~~~~~~~---------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 143 -PLAPYDRIYTTAAGPKIP---------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp -GGCCEEEEEESSBBSSCC---------HHHHHTEEEEEEEEEEESSS
T ss_pred -CCCCeeEEEECCchHHHH---------HHHHHHcCCCcEEEEEECCC
Confidence 137899999997776543 48899999999999985443
No 439
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.21 E-value=8e-07 Score=94.45 Aligned_cols=131 Identities=15% Similarity=0.195 Sum_probs=83.9
Q ss_pred ceeeEeeccccchHHHHHHhhC--CCceEEEEeeccCCCCChhHHHhccccccc-cccCCCCCCCCCccceEEecccccc
Q 005981 518 KLRNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSGFNTLPVIYDRGLIGVM-HDWCEPFDTYPRTYDLLHAAGLFSV 594 (666)
Q Consensus 518 ~iRnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~~~~l~~~~erGlig~~-~~~ce~~~~yp~tyDliha~~~f~~ 594 (666)
....|||+|||.|.++.+|+++ +..|.++.+ +.+++.+.+..-+.+. +|..+ .+|. ||+|.+..++.+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~~~~~v~~~~~d~~~---~~p~-~D~v~~~~~lh~ 258 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-----PQVVENLSGSNNLTYVGGDMFT---SIPN-ADAVLLKYILHN 258 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-----HHHHTTCCCBTTEEEEECCTTT---CCCC-CSEEEEESCGGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-----HHHHhhcccCCCcEEEeccccC---CCCC-ccEEEeehhhcc
Confidence 3467999999999999999976 343344333 2333333222113333 44433 3454 999999999988
Q ss_pred CCCCCCHHHHHHHhhhcccC---CeEEEEEeCh-----------h-----------------HHHHHHHHHHhcCcEEEE
Q 005981 595 ESKRCNMSTIMLEMDRMLRP---GGHVYIRDSI-----------D-----------------VMDELQEIGKAMGWHVTL 643 (666)
Q Consensus 595 ~~~~c~~~~~l~E~dRiLRP---gG~~ii~d~~-----------~-----------------~~~~~~~i~~~l~W~~~~ 643 (666)
+.+. ....+|.++.|+||| ||+++|.|.. . ..++++++++.-.++...
T Consensus 259 ~~d~-~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 337 (352)
T 1fp2_A 259 WTDK-DCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYK 337 (352)
T ss_dssp SCHH-HHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEE
T ss_pred CCHH-HHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeE
Confidence 7653 224899999999999 9999997521 0 124667777777777543
Q ss_pred EeccCCCCCceEEEEEEe
Q 005981 644 RETAEGPHASYRILTADK 661 (666)
Q Consensus 644 ~~~~~~~~~~e~~l~~~k 661 (666)
..... ....|+.++|
T Consensus 338 ~~~~~---~~~~vie~~~ 352 (352)
T 1fp2_A 338 ISPLT---GFLSLIEIYP 352 (352)
T ss_dssp EEEEE---TTEEEEEEEC
T ss_pred EEecC---CCcEEEEEeC
Confidence 32212 2345666654
No 440
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.20 E-value=3.9e-06 Score=90.57 Aligned_cols=102 Identities=14% Similarity=0.207 Sum_probs=68.1
Q ss_pred CCeEEEECCCCchhHHHhc-------------------cCCeEEEeCCcchHHHHHHHHHHH----------c--CCCce
Q 005981 275 IRVVMDAGCGVASFGAYLL-------------------PRNVITMSIAPKDVHENQIQFALE----------R--GAPAM 323 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~-------------------~~~V~gvDiS~~~l~~a~~~~a~~----------r--g~~~~ 323 (666)
..+|+|+|||+|..+..+. +-+|..-|+..+|.+......... . +....
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 4689999999997776651 117788899888875544332211 0 00112
Q ss_pred EEee---cccCCCCCCCCeeEEEecccccccccC--------------------------------------hHHHHHHH
Q 005981 324 VAAF---ATRRLPYPSQAFDLIHCSRCRINWTRD--------------------------------------DGILLLEV 362 (666)
Q Consensus 324 ~~~~---d~e~Lpf~d~sFDlVv~s~~l~h~~~d--------------------------------------~~~~L~el 362 (666)
+..+ ....-.|++++||+|+++.+ +||..+ ...+|+..
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~a-LHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFS-LHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESC-TTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecce-eeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222 22333478999999998766 888753 22468888
Q ss_pred HHhccCCeEEEEEEC
Q 005981 363 NRMLRAGGYFAWAAQ 377 (666)
Q Consensus 363 ~RvLkPGG~lv~st~ 377 (666)
++.|+|||.++++..
T Consensus 212 a~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHhCCCCEEEEEEe
Confidence 999999999999964
No 441
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.19 E-value=3.6e-07 Score=86.95 Aligned_cols=96 Identities=16% Similarity=0.254 Sum_probs=64.4
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCC-CCCC---CCccceEE
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEP-FDTY---PRTYDLLH 587 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~-~~~y---p~tyDlih 587 (666)
.+|||+|||.|.++.++++++. .+|+.+|. +.+++.+.++ |+ +.+++...+. .... +.+||+|.
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~~~----~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSRGM----DKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC----SEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEeCCccCHHHHHHHHcCC----CEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 3699999999999999988753 14566663 4566655443 43 4444333222 1111 47899999
Q ss_pred eccccccCCCCCCHHHHHHHh--hhcccCCeEEEEEeC
Q 005981 588 AAGLFSVESKRCNMSTIMLEM--DRMLRPGGHVYIRDS 623 (666)
Q Consensus 588 a~~~f~~~~~~c~~~~~l~E~--dRiLRPgG~~ii~d~ 623 (666)
++..|.. -..+.++.++ .|+|||||++++...
T Consensus 122 ~~~~~~~----~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 122 LDPPYAK----QEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp ECCCGGG----CCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred ECCCCCc----hhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 9876542 2346777777 999999999999743
No 442
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.19 E-value=1.5e-06 Score=90.08 Aligned_cols=127 Identities=19% Similarity=0.294 Sum_probs=84.9
Q ss_pred eEeeccccchHHHHHHhhC-CCceEEEEeeccCC-CCChhHHHhc----cc---cccc-cccCCCCCCCCCcc---ceEE
Q 005981 521 NVLDMRAGFGGFAAALIEQ-KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVM-HDWCEPFDTYPRTY---DLLH 587 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~-~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~-~~~ce~~~~yp~ty---Dlih 587 (666)
+|||+|||.|.++.+|++. +. +|+.+|. +.++.++.++ |+ +.++ .|+.+. .+.+| |+|.
T Consensus 126 ~vLDlG~GsG~~~~~la~~~~~-----~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~---~~~~f~~~D~Iv 197 (284)
T 1nv8_A 126 TVADIGTGSGAIGVSVAKFSDA-----IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---FKEKFASIEMIL 197 (284)
T ss_dssp EEEEESCTTSHHHHHHHHHSSC-----EEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---GGGGTTTCCEEE
T ss_pred EEEEEeCchhHHHHHHHHCCCC-----EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh---cccccCCCCEEE
Confidence 5999999999999999987 55 5666663 5677766554 54 4444 445332 34689 9999
Q ss_pred eccccc-----------cCC-----CCCCHHHHHHHhh-hcccCCeEEEEEeChhHHHHHHHHHHhcCcEEEEEeccCCC
Q 005981 588 AAGLFS-----------VES-----KRCNMSTIMLEMD-RMLRPGGHVYIRDSIDVMDELQEIGKAMGWHVTLRETAEGP 650 (666)
Q Consensus 588 a~~~f~-----------~~~-----~~c~~~~~l~E~d-RiLRPgG~~ii~d~~~~~~~~~~i~~~l~W~~~~~~~~~~~ 650 (666)
++--+. +.. ..++-..++.++- +.|+|||++++.-..+..+.+.++++.. ....|.
T Consensus 198 snPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~~v~~~~~~~---~~~~D~---- 270 (284)
T 1nv8_A 198 SNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDT---VFLKDS---- 270 (284)
T ss_dssp ECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHHHHTTTSTTC---EEEECT----
T ss_pred EcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHHhC---Ceeccc----
Confidence 962111 110 0111127899999 9999999999986666677777777665 222232
Q ss_pred CCceEEEEEEeC
Q 005981 651 HASYRILTADKR 662 (666)
Q Consensus 651 ~~~e~~l~~~k~ 662 (666)
.+.++++++.++
T Consensus 271 ~g~~R~~~~~~k 282 (284)
T 1nv8_A 271 AGKYRFLLLNRR 282 (284)
T ss_dssp TSSEEEEEEECC
T ss_pred CCCceEEEEEEc
Confidence 246888888775
No 443
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.19 E-value=1.6e-06 Score=89.26 Aligned_cols=112 Identities=13% Similarity=0.157 Sum_probs=74.4
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHh----ccc--cccccccCCCCCCCCCccceEEecccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYD----RGL--IGVMHDWCEPFDTYPRTYDLLHAAGLF 592 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~e----rGl--ig~~~~~ce~~~~yp~tyDliha~~~f 592 (666)
..|||+|||+|+|+..|++++-. ..|+.+|. +.+++.+.+ .|+ +-+++.-++.+ ..+.+||+|.++...
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~---~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKP---KLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-ELKDVADRVIMGYVH 196 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCC---SEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CCTTCEEEEEECCCS
T ss_pred CEEEEecCcCCHHHHHHHHhCCC---CEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-CccCCceEEEECCcc
Confidence 35999999999999999987210 14555553 455555544 344 33555555444 336789999887432
Q ss_pred ccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh------hH-HHHHHHHHHhcCcEEE
Q 005981 593 SVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI------DV-MDELQEIGKAMGWHVT 642 (666)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~------~~-~~~~~~i~~~l~W~~~ 642 (666)
....++.++-|+|||||.+++++.. +. .+.++.+.+.+.+++.
T Consensus 197 -------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (272)
T 3a27_A 197 -------KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLI 246 (272)
T ss_dssp -------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEE
T ss_pred -------cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeE
Confidence 4568999999999999999998542 23 3445555565666654
No 444
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.19 E-value=9.1e-07 Score=88.56 Aligned_cols=126 Identities=17% Similarity=0.182 Sum_probs=79.7
Q ss_pred eeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccC-CCCCCCC-----Cc
Q 005981 520 RNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWC-EPFDTYP-----RT 582 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~c-e~~~~yp-----~t 582 (666)
++|||+|||.|.++.+|++. +. .|+.+|. +.+++.+.++ |+ |.+..... +.+..++ .+
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~-----~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDG-----QIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTC-----EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCC-----EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 46999999999999999886 33 4555553 4566666543 54 33333221 1112221 68
Q ss_pred cceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeCh------------hHHHHHHHHHH----hcCcEEEEEec
Q 005981 583 YDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSI------------DVMDELQEIGK----AMGWHVTLRET 646 (666)
Q Consensus 583 yDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~------------~~~~~~~~i~~----~l~W~~~~~~~ 646 (666)
||+|.++.. .-....++.++-|+|||||++++.+.. .....++++.+ .-+++......
T Consensus 149 fD~V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~ 222 (232)
T 3cbg_A 149 FDLIFIDAD------KRNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIPL 222 (232)
T ss_dssp EEEEEECSC------GGGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEECS
T ss_pred cCEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEEc
Confidence 999998742 234578999999999999999996321 22334444443 34666666554
Q ss_pred cCCCCCceEEEEEEeC
Q 005981 647 AEGPHASYRILTADKR 662 (666)
Q Consensus 647 ~~~~~~~e~~l~~~k~ 662 (666)
.+ .+.+++|+
T Consensus 223 ~d------G~~~~~~~ 232 (232)
T 3cbg_A 223 GD------GMTLALKK 232 (232)
T ss_dssp BT------CEEEEEEC
T ss_pred CC------eEEEEEeC
Confidence 33 48888874
No 445
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.18 E-value=1.2e-06 Score=88.99 Aligned_cols=92 Identities=13% Similarity=0.144 Sum_probs=63.9
Q ss_pred eeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHh----ccc---cccccccCCC-CCCC------CC
Q 005981 520 RNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYD----RGL---IGVMHDWCEP-FDTY------PR 581 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~e----rGl---ig~~~~~ce~-~~~y------p~ 581 (666)
++|||+|||.|..+..|++. +. .|+.+|. +.+++++.+ .|+ |.+.+...+. .+.+ +.
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~~~~~-----~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 155 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAIPEDG-----KILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHG 155 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHSCTTC-----EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTT
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCC-----EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCC
Confidence 47999999999999999875 34 4555653 566666554 355 4444333222 2222 47
Q ss_pred ccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 582 TYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 582 tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
+||+|.++.. .-....++.++.|+|||||.+++.+
T Consensus 156 ~fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 156 SYDFIFVDAD------KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp CBSEEEECSC------STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred CEEEEEEcCc------hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 8999998732 2346789999999999999999964
No 446
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.18 E-value=7.8e-06 Score=84.18 Aligned_cols=121 Identities=17% Similarity=0.178 Sum_probs=72.7
Q ss_pred ccccHHHHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHcCCCceEEe
Q 005981 251 FIHGADQYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALERGAPAMVAA 326 (666)
Q Consensus 251 F~~g~~~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~ 326 (666)
|...+...+.++.+. ..+ ....+|||||||+|.|+.+.+.+ .|.++|++.. +....... ...+.......
T Consensus 55 YrSRaA~KL~ei~ek-~~l---~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvD-l~~~pi~~-~~~g~~ii~~~ 128 (277)
T 3evf_A 55 AVSRGTAKLRWFHER-GYV---KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRD-GHEKPMNV-QSLGWNIITFK 128 (277)
T ss_dssp CSSTHHHHHHHHHHT-TSS---CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT-TCCCCCCC-CBTTGGGEEEE
T ss_pred ccccHHHHHHHHHHh-CCC---CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEecc-Cccccccc-CcCCCCeEEEe
Confidence 333444455666655 222 34468999999999999987654 6788888742 21000000 00111222333
Q ss_pred ecccCCCCCCCCeeEEEeccc---ccccccChH--HHHHHHHHhccCC-eEEEEEEC
Q 005981 327 FATRRLPYPSQAFDLIHCSRC---RINWTRDDG--ILLLEVNRMLRAG-GYFAWAAQ 377 (666)
Q Consensus 327 ~d~e~Lpf~d~sFDlVv~s~~---l~h~~~d~~--~~L~el~RvLkPG-G~lv~st~ 377 (666)
.+++...++.+.||+|+|..+ .+++.+... .+|..+.++|+|| |.|++..+
T Consensus 129 ~~~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf 185 (277)
T 3evf_A 129 DKTDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVL 185 (277)
T ss_dssp CSCCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred ccceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEec
Confidence 334555677789999998653 222422222 3568889999999 99999865
No 447
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.17 E-value=1.6e-06 Score=96.69 Aligned_cols=95 Identities=18% Similarity=0.209 Sum_probs=67.7
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCCCCChhHHHh----ccc---cccccccCCCCCCCCCccceEEecccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSGFNTLPVIYD----RGL---IGVMHDWCEPFDTYPRTYDLLHAAGLF 592 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~~~~l~~~~e----rGl---ig~~~~~ce~~~~yp~tyDliha~~~f 592 (666)
..|||+|||.|.++..|++.|. ..|+.+|...+++.+.+ .|+ +.+.+...+.+ .+|..||+|.|..++
T Consensus 160 ~~VLDiGcGtG~la~~la~~~~----~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~-~~~~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQAGA----RKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEV-SLPEQVDIIISEPMG 234 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHTTC----SEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSCEEEEECCCCH
T ss_pred CEEEEecCcccHHHHHHHHcCC----CEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhC-ccCCCeEEEEEeCch
Confidence 4699999999999999998853 14555654335555544 365 55665544443 256899999998776
Q ss_pred ccCCCCCCHHHHHHHhhhcccCCeEEEE
Q 005981 593 SVESKRCNMSTIMLEMDRMLRPGGHVYI 620 (666)
Q Consensus 593 ~~~~~~c~~~~~l~E~dRiLRPgG~~ii 620 (666)
.+..+. .+...+.++.|+|||||++++
T Consensus 235 ~~~~~e-~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 235 YMLFNE-RMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHHTCH-HHHHHHHHGGGGEEEEEEEES
T ss_pred HhcCcH-HHHHHHHHHHHhcCCCCEEEE
Confidence 654432 345778899999999999996
No 448
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.17 E-value=9.1e-07 Score=86.68 Aligned_cols=97 Identities=9% Similarity=0.101 Sum_probs=67.5
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCC-CCCCCCccceEEeccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEP-FDTYPRTYDLLHAAGL 591 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~-~~~yp~tyDliha~~~ 591 (666)
.+|||+|||+|.++.+++.++.. .|+.+|. +.+++.+.++ |+ +.+++..++. .+..+.+||+|.++..
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~----~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p 131 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAA----GATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP 131 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCS----EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS
T ss_pred CeEEEeCCCcCHHHHHHHhcCCC----EEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC
Confidence 35999999999999998887641 6777774 5777776553 43 4444443333 2223479999999866
Q ss_pred cccCCCCCCHHHHHHHhh--hcccCCeEEEEEeCh
Q 005981 592 FSVESKRCNMSTIMLEMD--RMLRPGGHVYIRDSI 624 (666)
Q Consensus 592 f~~~~~~c~~~~~l~E~d--RiLRPgG~~ii~d~~ 624 (666)
|.. -....++.++. |+|||||.+++....
T Consensus 132 ~~~----~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 132 FRR----GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp SST----TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCC----CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 542 23467888885 479999999998544
No 449
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.17 E-value=1.3e-06 Score=91.80 Aligned_cols=102 Identities=17% Similarity=0.043 Sum_probs=68.5
Q ss_pred HHhcccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccC-CCCChhHHHhc----cc--cccccccCCCCCCCCC
Q 005981 509 VRALHWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVS-GFNTLPVIYDR----GL--IGVMHDWCEPFDTYPR 581 (666)
Q Consensus 509 ~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~-~~~~l~~~~er----Gl--ig~~~~~ce~~~~yp~ 581 (666)
.+.+.+..+. .|||+|||.|.++..|++.+.. ..+|+.+| ++.+++.+.++ |+ +.+.+.-.+....-..
T Consensus 68 ~~~l~~~~~~--~VLDiGcG~G~~~~~la~~~~~--~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~ 143 (317)
T 1dl5_A 68 MEWVGLDKGM--RVLEIGGGTGYNAAVMSRVVGE--KGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFS 143 (317)
T ss_dssp HHHTTCCTTC--EEEEECCTTSHHHHHHHHHHCT--TCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred HHhcCCCCcC--EEEEecCCchHHHHHHHHhcCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCC
Confidence 3445555553 6999999999999999987432 01255555 35677666655 55 4444333333222237
Q ss_pred ccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC
Q 005981 582 TYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS 623 (666)
Q Consensus 582 tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~ 623 (666)
.||+|.+...+.+.. .++.|+|||||.+++...
T Consensus 144 ~fD~Iv~~~~~~~~~---------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 144 PYDVIFVTVGVDEVP---------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CEEEEEECSBBSCCC---------HHHHHHEEEEEEEEEEBC
T ss_pred CeEEEEEcCCHHHHH---------HHHHHhcCCCcEEEEEEC
Confidence 899999998877654 478899999999999753
No 450
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.16 E-value=4.7e-06 Score=86.02 Aligned_cols=141 Identities=13% Similarity=0.096 Sum_probs=85.8
Q ss_pred ceeeEeeccccchHHHHHHhhC-CCceEEEEeeccCC-CCChhHHHhc------cc----cccccccCCC-CCCCCCccc
Q 005981 518 KLRNVLDMRAGFGGFAAALIEQ-KFDCWVMNVVPVSG-FNTLPVIYDR------GL----IGVMHDWCEP-FDTYPRTYD 584 (666)
Q Consensus 518 ~iRnvlD~g~G~Ggfaa~L~~~-~~~vwvmnv~~~~~-~~~l~~~~er------Gl----ig~~~~~ce~-~~~yp~tyD 584 (666)
+-++|||+|||.|+++.++++. +. ..|+-+|- +.+++.+.++ ++ +.+.+..+.. +...+.+||
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~----~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD 150 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSV----KKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYD 150 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTC----SEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCC----ceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCee
Confidence 3468999999999999999987 42 24444552 4666666553 22 3444433322 122357999
Q ss_pred eEEeccccccCCC--CCCHHHHHHHhhhcccCCeEEEEEeC-----hhHHHHHHHHHHhcCcEEEEEeccCC--CCCceE
Q 005981 585 LLHAAGLFSVESK--RCNMSTIMLEMDRMLRPGGHVYIRDS-----IDVMDELQEIGKAMGWHVTLRETAEG--PHASYR 655 (666)
Q Consensus 585 liha~~~f~~~~~--~c~~~~~l~E~dRiLRPgG~~ii~d~-----~~~~~~~~~i~~~l~W~~~~~~~~~~--~~~~e~ 655 (666)
+|.++. +..... .-....++.++.|+|+|||.+++... .+....+.+.+++.--.+......-- +.+...
T Consensus 151 ~Ii~d~-~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~ 229 (275)
T 1iy9_A 151 VIMVDS-TEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWT 229 (275)
T ss_dssp EEEESC-SSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEE
T ss_pred EEEECC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceE
Confidence 999963 332211 01125899999999999999999721 33455555555555444544432111 123567
Q ss_pred EEEEEeCC
Q 005981 656 ILTADKRL 663 (666)
Q Consensus 656 ~l~~~k~~ 663 (666)
+++|.|++
T Consensus 230 ~~~ask~~ 237 (275)
T 1iy9_A 230 FTIGSKKY 237 (275)
T ss_dssp EEEEESSC
T ss_pred EEEeeCCC
Confidence 88898863
No 451
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.16 E-value=6.8e-06 Score=87.47 Aligned_cols=142 Identities=17% Similarity=0.128 Sum_probs=89.0
Q ss_pred HHhcccCCCceeeEeeccccchHHHHHHhhCC---CceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCCC
Q 005981 509 VRALHWKKMKLRNVLDMRAGFGGFAAALIEQK---FDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFDT 578 (666)
Q Consensus 509 ~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~---~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~~ 578 (666)
....++..+ ..|||+|||.|+++..++..+ . .|+.+|. +.+++.+.++ |+ |.+.+...+.++.
T Consensus 196 ~~~~~~~~~--~~vLD~gcGsG~~~ie~a~~~~~~~-----~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~ 268 (354)
T 3tma_A 196 LRLADARPG--MRVLDPFTGSGTIALEAASTLGPTS-----PVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPR 268 (354)
T ss_dssp HHHTTCCTT--CCEEESSCTTSHHHHHHHHHHCTTS-----CEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGG
T ss_pred HHHhCCCCC--CEEEeCCCCcCHHHHHHHHhhCCCc-----eEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcc
Confidence 344555544 459999999999998888753 4 4555553 4566655543 54 5555555444443
Q ss_pred CCCccceEEeccccccCC-CCC----CHHHHHHHhhhcccCCeEEEEEeChhHHHHHHHHHHhcCcEEEEEecc-CCCCC
Q 005981 579 YPRTYDLLHAAGLFSVES-KRC----NMSTIMLEMDRMLRPGGHVYIRDSIDVMDELQEIGKAMGWHVTLRETA-EGPHA 652 (666)
Q Consensus 579 yp~tyDliha~~~f~~~~-~~c----~~~~~l~E~dRiLRPgG~~ii~d~~~~~~~~~~i~~~l~W~~~~~~~~-~~~~~ 652 (666)
....||+|.++--|.... ..- ....++.++.|+|||||.+++..... ..++.+.+ ..|+......= +|. -
T Consensus 269 ~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~--~~~~~~~~-~g~~~~~~~~l~~g~-l 344 (354)
T 3tma_A 269 FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP--ALLKRALP-PGFALRHARVVEQGG-V 344 (354)
T ss_dssp TCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH--HHHHHHCC-TTEEEEEEEECCBTT-B
T ss_pred ccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH--HHHHHHhh-cCcEEEEEEEEEeCC-E
Confidence 346799999975543211 111 12578999999999999999975543 22456666 88887554332 333 3
Q ss_pred ceEEEEEEe
Q 005981 653 SYRILTADK 661 (666)
Q Consensus 653 ~e~~l~~~k 661 (666)
.-.|++++|
T Consensus 345 ~~~i~vl~r 353 (354)
T 3tma_A 345 YPRVFVLEK 353 (354)
T ss_dssp CCEEEEEEE
T ss_pred EEEEEEEEc
Confidence 346777766
No 452
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.16 E-value=3e-06 Score=91.12 Aligned_cols=107 Identities=17% Similarity=0.163 Sum_probs=70.8
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCc-eEEeecccCCC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPA-MVAAFATRRLP 333 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~-~~~~~d~e~Lp 333 (666)
.+.+.+.+.+. ..+.+|||+|||+|.++..++.. +|+|+|+++.++..++. .+...++.. .+...|++++.
T Consensus 201 ~l~~~~~~~~~-----~~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~-n~~~ng~~~v~~~~~d~~~~~ 274 (369)
T 3bt7_A 201 QMLEWALDVTK-----GSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQY-NIAANHIDNVQIIRMAAEEFT 274 (369)
T ss_dssp HHHHHHHHHTT-----TCCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHH-HHHHTTCCSEEEECCCSHHHH
T ss_pred HHHHHHHHHhh-----cCCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEECCHHHHH
Confidence 34445555443 12368999999999999999875 89999999999988874 445556543 34444443321
Q ss_pred --CCC--------------CCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 334 --YPS--------------QAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 334 --f~d--------------~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
+.. .+||+|++..-. ..+..++.+.|+++|.+++.+
T Consensus 275 ~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr-------~g~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 275 QAMNGVREFNRLQGIDLKSYQCETIFVDPPR-------SGLDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp HHHSSCCCCTTGGGSCGGGCCEEEEEECCCT-------TCCCHHHHHHHTTSSEEEEEE
T ss_pred HHHhhccccccccccccccCCCCEEEECcCc-------cccHHHHHHHHhCCCEEEEEE
Confidence 111 379999864221 123456777788888888875
No 453
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.15 E-value=2.2e-06 Score=88.70 Aligned_cols=136 Identities=15% Similarity=0.053 Sum_probs=81.0
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc-----cc-----------cccccccCCC-CCCCCC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR-----GL-----------IGVMHDWCEP-FDTYPR 581 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er-----Gl-----------ig~~~~~ce~-~~~yp~ 581 (666)
++|||+|||.|+++.+|++.+. .+|+.+|. +.+++.+.++ |+ +.+.+.-... ... +.
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~~~----~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 77 KRVLVIGGGDGGTVREVLQHDV----DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp CEEEEEECTTSHHHHHHTTSCC----SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CeEEEEcCCcCHHHHHHHhCCC----CEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 5799999999999999998842 24555553 4666666554 21 2233222111 111 57
Q ss_pred ccceEEeccccccCCCCCC--HHHHHHHhhhcccCCeEEEEEe-----ChhHHHHHHHHHHhcCcEEEEEeccCCC--CC
Q 005981 582 TYDLLHAAGLFSVESKRCN--MSTIMLEMDRMLRPGGHVYIRD-----SIDVMDELQEIGKAMGWHVTLRETAEGP--HA 652 (666)
Q Consensus 582 tyDliha~~~f~~~~~~c~--~~~~l~E~dRiLRPgG~~ii~d-----~~~~~~~~~~i~~~l~W~~~~~~~~~~~--~~ 652 (666)
+||+|.++.. ......-. ...++.++.|+|||||.+++.. ..+....+.+.++..--.+...... -| .+
T Consensus 152 ~fD~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~-vP~~~g 229 (281)
T 1mjf_A 152 GFDVIIADST-DPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFP-VIGYAS 229 (281)
T ss_dssp CEEEEEEECC-CCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEEC-CTTSSS
T ss_pred CeeEEEECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEe-cCCCCc
Confidence 8999998633 22211111 2688999999999999999962 2334445555454443344433221 11 24
Q ss_pred ceEEEEEEeC
Q 005981 653 SYRILTADKR 662 (666)
Q Consensus 653 ~e~~l~~~k~ 662 (666)
...+++|.|.
T Consensus 230 ~~~~~~as~~ 239 (281)
T 1mjf_A 230 PWAFLVGVKG 239 (281)
T ss_dssp SEEEEEEEES
T ss_pred eEEEEEeeCC
Confidence 5778888886
No 454
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.15 E-value=3.4e-06 Score=89.79 Aligned_cols=130 Identities=14% Similarity=0.197 Sum_probs=83.0
Q ss_pred ceeeEeeccccchHHHHHHhhC--CCceEEEEeeccCCCCChhHHHh-ccccccc-cccCCCCCCCCCccceEEeccccc
Q 005981 518 KLRNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSGFNTLPVIYD-RGLIGVM-HDWCEPFDTYPRTYDLLHAAGLFS 593 (666)
Q Consensus 518 ~iRnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~~~~l~~~~e-rGlig~~-~~~ce~~~~yp~tyDliha~~~f~ 593 (666)
....|||+|||.|.++.+|+++ ++.+.+..+ +.+++.+.+ .+ +.+. +|..+ .+| .||+|.+..++.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~~~~~-v~~~~~d~~~---~~~-~~D~v~~~~vlh 262 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-----PQVVGNLTGNEN-LNFVGGDMFK---SIP-SADAVLLKWVLH 262 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-----HHHHSSCCCCSS-EEEEECCTTT---CCC-CCSEEEEESCGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-----HHHHhhcccCCC-cEEEeCccCC---CCC-CceEEEEccccc
Confidence 3467999999999999999987 332333332 223322222 12 3333 44433 345 499999999998
Q ss_pred cCCCCCCHHHHHHHhhhcccC---CeEEEEEeCh-----------h------------------HHHHHHHHHHhcCcEE
Q 005981 594 VESKRCNMSTIMLEMDRMLRP---GGHVYIRDSI-----------D------------------VMDELQEIGKAMGWHV 641 (666)
Q Consensus 594 ~~~~~c~~~~~l~E~dRiLRP---gG~~ii~d~~-----------~------------------~~~~~~~i~~~l~W~~ 641 (666)
++.+. ....+|.++.|+||| ||+++|.|.. . ..++++++++.-.++.
T Consensus 263 ~~~d~-~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~ 341 (358)
T 1zg3_A 263 DWNDE-QSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSS 341 (358)
T ss_dssp GSCHH-HHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCE
T ss_pred CCCHH-HHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCe
Confidence 87653 224999999999999 9999996421 0 1345677788888876
Q ss_pred EEEeccCCCCCceEEEEEEe
Q 005981 642 TLRETAEGPHASYRILTADK 661 (666)
Q Consensus 642 ~~~~~~~~~~~~e~~l~~~k 661 (666)
.....-. ....|+.++|
T Consensus 342 ~~~~~~~---~~~~vie~~~ 358 (358)
T 1zg3_A 342 YKITPIS---GFKSLIEVYP 358 (358)
T ss_dssp EEEEEET---TTEEEEEEEC
T ss_pred eEEEecC---CCcEEEEEeC
Confidence 5433222 2345666654
No 455
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.12 E-value=2.5e-06 Score=88.10 Aligned_cols=118 Identities=14% Similarity=0.150 Sum_probs=75.9
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC--CCChhHHHhc---------cc-------cccc-cccCCCCCCC-
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG--FNTLPVIYDR---------GL-------IGVM-HDWCEPFDTY- 579 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~--~~~l~~~~er---------Gl-------ig~~-~~~ce~~~~y- 579 (666)
..|||+|||+|.++.+|++.|.. .|+.+|. +.+++.+.++ |+ +.+. .+|.+.....
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~~----~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGAD----QVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCS----EEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred CeEEEecccccHHHHHHHHcCCC----EEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 36999999999999999998751 3444443 2455555443 21 2232 5576543322
Q ss_pred ----CCccceEEeccccccCCCCCCHHHHHHHhhhccc---C--CeEEEEE-eCh-----hHHHHHHHHHHhcC-cEEEE
Q 005981 580 ----PRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLR---P--GGHVYIR-DSI-----DVMDELQEIGKAMG-WHVTL 643 (666)
Q Consensus 580 ----p~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLR---P--gG~~ii~-d~~-----~~~~~~~~i~~~l~-W~~~~ 643 (666)
+.+||+|.+.+++-+.. +...++.++.|+|+ | ||.+++. ... +...++.+.++... |++..
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~---~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~ 233 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQ---AHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAEP 233 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGG---GHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEEE
T ss_pred hhccCCCCCEEEEeCcccChH---HHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEEE
Confidence 37899999987766533 35799999999999 9 9976653 211 12344555667777 77765
Q ss_pred E
Q 005981 644 R 644 (666)
Q Consensus 644 ~ 644 (666)
.
T Consensus 234 ~ 234 (281)
T 3bzb_A 234 W 234 (281)
T ss_dssp E
T ss_pred e
Confidence 4
No 456
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.12 E-value=1.9e-06 Score=86.72 Aligned_cols=92 Identities=12% Similarity=0.119 Sum_probs=62.1
Q ss_pred eeEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHh----ccc---ccccc-ccCCCCCCC------CC
Q 005981 520 RNVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYD----RGL---IGVMH-DWCEPFDTY------PR 581 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~e----rGl---ig~~~-~~ce~~~~y------p~ 581 (666)
++|||+|||.|..+.+|++. +. .|+.+|. +.+++.+.+ .|+ |.+.+ +..+.++.+ +.
T Consensus 72 ~~VLeiG~G~G~~~~~la~~~~~~~-----~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 72 KKTIEVGVFTGYSLLLTALSIPDDG-----KITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp CEEEEECCTTSHHHHHHHHHSCTTC-----EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCCC-----EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCC
Confidence 57999999999999999875 33 4555553 455555543 365 33432 222222222 47
Q ss_pred ccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe
Q 005981 582 TYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD 622 (666)
Q Consensus 582 tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d 622 (666)
+||+|.++.- .-....++.++.|+|||||.+++.+
T Consensus 147 ~fD~I~~d~~------~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 147 SYDFGFVDAD------KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp CEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CcCEEEECCc------hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 8999998731 2245789999999999999999964
No 457
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.08 E-value=6.4e-06 Score=84.36 Aligned_cols=82 Identities=13% Similarity=0.206 Sum_probs=58.7
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY 334 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf 334 (666)
.+++.+.+.+.. ....+|||||||+|.++..|+++ +|+++|+++.++..++.+... .....+...|+..+++
T Consensus 16 ~i~~~iv~~~~~----~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~ 89 (255)
T 3tqs_A 16 FVLQKIVSAIHP----QKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDF 89 (255)
T ss_dssp HHHHHHHHHHCC----CTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCG
T ss_pred HHHHHHHHhcCC----CCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCH
Confidence 456666666642 34578999999999999999987 899999999998777644332 2234556667777776
Q ss_pred C----CCCeeEEEec
Q 005981 335 P----SQAFDLIHCS 345 (666)
Q Consensus 335 ~----d~sFDlVv~s 345 (666)
+ ++.|| |+++
T Consensus 90 ~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 90 SSVKTDKPLR-VVGN 103 (255)
T ss_dssp GGSCCSSCEE-EEEE
T ss_pred HHhccCCCeE-EEec
Confidence 4 35688 5544
No 458
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.07 E-value=8.8e-06 Score=88.44 Aligned_cols=115 Identities=11% Similarity=0.056 Sum_probs=75.9
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC-----------------------------------------
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR----------------------------------------- 295 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~----------------------------------------- 295 (666)
.++..++.+.. . .....|||.+||+|+++...+..
T Consensus 188 ~lAa~ll~l~~-~---~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 188 TMAAALVLLTS-W---HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp HHHHHHHHHSC-C---CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred HHHHHHHHHhC-C---CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 34445554443 1 23468999999999887655421
Q ss_pred -CeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCCCCCCCCeeEEEecccccccc---cChHHHHHHHHHhccC-
Q 005981 296 -NVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSRCRINWT---RDDGILLLEVNRMLRA- 368 (666)
Q Consensus 296 -~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~---~d~~~~L~el~RvLkP- 368 (666)
+|+|+|+++.++..|+. .+...|+. ..+...|+.+++.+ .+||+|+++--...-. .+...+.+++.++||+
T Consensus 264 ~~V~GvDid~~al~~Ar~-Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~ 341 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQ-NAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRM 341 (393)
T ss_dssp CCEEEEESCHHHHHHHHH-HHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTC
T ss_pred ceEEEEECCHHHHHHHHH-HHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcC
Confidence 39999999999988875 44555654 35666677777765 5899999874432221 1233566667777776
Q ss_pred -CeEEEEEEC
Q 005981 369 -GGYFAWAAQ 377 (666)
Q Consensus 369 -GG~lv~st~ 377 (666)
||.+++.+.
T Consensus 342 ~g~~~~iit~ 351 (393)
T 3k0b_A 342 PTWSVYVLTS 351 (393)
T ss_dssp TTCEEEEEEC
T ss_pred CCCEEEEEEC
Confidence 888777753
No 459
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.06 E-value=1.8e-06 Score=93.96 Aligned_cols=126 Identities=10% Similarity=0.106 Sum_probs=80.5
Q ss_pred HHHHHHhcccCCCceeeEeeccccchHHHHHHhhC-CCceEEEEeeccCC-CCChhHHHh-----------ccc----cc
Q 005981 505 IESYVRALHWKKMKLRNVLDMRAGFGGFAAALIEQ-KFDCWVMNVVPVSG-FNTLPVIYD-----------RGL----IG 567 (666)
Q Consensus 505 v~~Y~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~-~~~vwvmnv~~~~~-~~~l~~~~e-----------rGl----ig 567 (666)
+....+.+++..+.. |||+|||+|.++..|+.. |+. .|+.+|. +.++.+|.+ .|+ |.
T Consensus 162 i~~il~~l~l~~gd~--VLDLGCGtG~l~l~lA~~~g~~----kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVe 235 (438)
T 3uwp_A 162 VAQMIDEIKMTDDDL--FVDLGSGVGQVVLQVAAATNCK----HHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYT 235 (438)
T ss_dssp HHHHHHHHCCCTTCE--EEEESCTTSHHHHHHHHHCCCS----EEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEE
T ss_pred HHHHHHhcCCCCCCE--EEEeCCCCCHHHHHHHHHCCCC----EEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeE
Confidence 333445556666544 999999999999988754 552 3555653 355655543 243 55
Q ss_pred cccccCCCCCCCC---CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeChhH------HHHHHHHHHhcC
Q 005981 568 VMHDWCEPFDTYP---RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSIDV------MDELQEIGKAMG 638 (666)
Q Consensus 568 ~~~~~ce~~~~yp---~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~~------~~~~~~i~~~l~ 638 (666)
+.+......+ ++ ..||+|.++..+ +. -++...|.||.|+|||||.||+.|...- -+.++.|...|+
T Consensus 236 fi~GD~~~lp-~~d~~~~aDVVf~Nn~~-F~---pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d~~i~~rnl~di~~il~ 310 (438)
T 3uwp_A 236 LERGDFLSEE-WRERIANTSVIFVNNFA-FG---PEVDHQLKERFANMKEGGRIVSSKPFAPLNFRINSRNLSDIGTIMR 310 (438)
T ss_dssp EEECCTTSHH-HHHHHHTCSEEEECCTT-CC---HHHHHHHHHHHTTSCTTCEEEESSCSSCTTCCCCSSSTTSGGGSEE
T ss_pred EEECcccCCc-cccccCCccEEEEcccc-cC---chHHHHHHHHHHcCCCCcEEEEeecccCCCCCCCcccccChhhhhe
Confidence 5555433222 22 379999987543 21 2456889999999999999999854321 234566777887
Q ss_pred cEE
Q 005981 639 WHV 641 (666)
Q Consensus 639 W~~ 641 (666)
++.
T Consensus 311 v~e 313 (438)
T 3uwp_A 311 VVE 313 (438)
T ss_dssp EEE
T ss_pred eee
Confidence 753
No 460
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.04 E-value=1.8e-05 Score=81.19 Aligned_cols=127 Identities=13% Similarity=-0.034 Sum_probs=75.2
Q ss_pred eeeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----------cccccccccCCCCCCCCCccceEE
Q 005981 519 LRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----------GLIGVMHDWCEPFDTYPRTYDLLH 587 (666)
Q Consensus 519 iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----------Glig~~~~~ce~~~~yp~tyDlih 587 (666)
-++|||+|||.|++++++++.+. .|+-+|- +.+++.+.++ .-+.+.+.-...+. .+||+|-
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~~-----~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii 144 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYDT-----HIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIF 144 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSSC-----EEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEE
T ss_pred CCEEEEEeCCcCHHHHHHHhCCC-----EEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEE
Confidence 36899999999999999988753 3444442 3444444332 11334433333333 7899999
Q ss_pred eccccccCCCCCCHHHHHHHhhhcccCCeEEEEEe-C----hhHHHHHHHHHHhcCcEEEEEeccCCC-CCceEEEEEEe
Q 005981 588 AAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRD-S----IDVMDELQEIGKAMGWHVTLRETAEGP-HASYRILTADK 661 (666)
Q Consensus 588 a~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d-~----~~~~~~~~~i~~~l~W~~~~~~~~~~~-~~~e~~l~~~k 661 (666)
++. .+ ....+.++.|+|||||.+++.. . .+....+.+.+++.--.+.... ..-| .+...+++|.|
T Consensus 145 ~d~-----~d---p~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~-~~vP~~g~~~~~~as~ 215 (262)
T 2cmg_A 145 CLQ-----EP---DIHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPFV-APLRILSNKGYIYASF 215 (262)
T ss_dssp ESS-----CC---CHHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEEEC-CTTCTTCCEEEEEEES
T ss_pred ECC-----CC---hHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEEEE-EccCCCcccEEEEeeC
Confidence 871 11 2348999999999999999962 2 1233444444444322333322 2222 23455778887
Q ss_pred C
Q 005981 662 R 662 (666)
Q Consensus 662 ~ 662 (666)
.
T Consensus 216 ~ 216 (262)
T 2cmg_A 216 K 216 (262)
T ss_dssp S
T ss_pred C
Confidence 5
No 461
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.03 E-value=4.2e-06 Score=89.75 Aligned_cols=104 Identities=13% Similarity=0.068 Sum_probs=66.8
Q ss_pred CCCCeEEEECCCCchhHHHhccC---CeEEEeCCcchHHHHHHHHHHHcC--C------CceEEeecccC-CC-C--CCC
Q 005981 273 HHIRVVMDAGCGVASFGAYLLPR---NVITMSIAPKDVHENQIQFALERG--A------PAMVAAFATRR-LP-Y--PSQ 337 (666)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~---~V~gvDiS~~~l~~a~~~~a~~rg--~------~~~~~~~d~e~-Lp-f--~d~ 337 (666)
..+++|||||||+|.+++.++++ +|+++|+++.++..++..+....+ . ...+...|... +. + ..+
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 35689999999999999988765 799999999888766543321110 1 12333444322 11 1 257
Q ss_pred CeeEEEecccccccccCh-----HHHHHHH----HHhccCCeEEEEEE
Q 005981 338 AFDLIHCSRCRINWTRDD-----GILLLEV----NRMLRAGGYFAWAA 376 (666)
Q Consensus 338 sFDlVv~s~~l~h~~~d~-----~~~L~el----~RvLkPGG~lv~st 376 (666)
+||+|++...-......+ ..+++.+ .++|+|||.+++.+
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 899999754321221111 3556666 89999999998875
No 462
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.03 E-value=9.1e-06 Score=84.00 Aligned_cols=86 Identities=14% Similarity=0.121 Sum_probs=61.5
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhccC--CeEEEeCCcchHHHHHHHHHHHcCCCceEEeecccCCCC
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLPR--NVITMSIAPKDVHENQIQFALERGAPAMVAAFATRRLPY 334 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~~--~V~gvDiS~~~l~~a~~~~a~~rg~~~~~~~~d~e~Lpf 334 (666)
.+++.+.+.+.. .+. +|||||||+|.++..|+++ +|+++|+++.++..++.+.. +....+...|+..+++
T Consensus 34 ~i~~~Iv~~~~~----~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~---~~~v~vi~~D~l~~~~ 105 (271)
T 3fut_A 34 AHLRRIVEAARP----FTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS---GLPVRLVFQDALLYPW 105 (271)
T ss_dssp HHHHHHHHHHCC----CCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT---TSSEEEEESCGGGSCG
T ss_pred HHHHHHHHhcCC----CCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC---CCCEEEEECChhhCCh
Confidence 456677776652 334 8999999999999999876 89999999999877654432 2234556667777776
Q ss_pred CC-CCeeEEEeccccccc
Q 005981 335 PS-QAFDLIHCSRCRINW 351 (666)
Q Consensus 335 ~d-~sFDlVv~s~~l~h~ 351 (666)
++ ..+|.|+++.- .+.
T Consensus 106 ~~~~~~~~iv~NlP-y~i 122 (271)
T 3fut_A 106 EEVPQGSLLVANLP-YHI 122 (271)
T ss_dssp GGSCTTEEEEEEEC-SSC
T ss_pred hhccCccEEEecCc-ccc
Confidence 54 26899986533 444
No 463
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.02 E-value=3.3e-06 Score=87.47 Aligned_cols=100 Identities=17% Similarity=0.275 Sum_probs=68.9
Q ss_pred eeEeeccccchH----HHHHHhhC-CC-c-eEEEEeeccC-CCCChhHHHhcc---------------------------
Q 005981 520 RNVLDMRAGFGG----FAAALIEQ-KF-D-CWVMNVVPVS-GFNTLPVIYDRG--------------------------- 564 (666)
Q Consensus 520 RnvlD~g~G~Gg----faa~L~~~-~~-~-vwvmnv~~~~-~~~~l~~~~erG--------------------------- 564 (666)
-.|+|+|||+|- .|..|++. |. . -| .|+.+| ++.+|+.|.+.-
T Consensus 107 ~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~--~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 107 YRVWSAAASTGEEPYSIAITLADALGMAPGRW--KVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp EEEEESCCTTTHHHHHHHHHHHHHHCSCTTSE--EEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred cEEEEeeccCChhHHHHHHHHHHhcccCCCCe--EEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 359999999997 67667664 21 0 02 677887 468888886531
Q ss_pred ----------ccc-cccccCCC-CCCCCCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC
Q 005981 565 ----------LIG-VMHDWCEP-FDTYPRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS 623 (666)
Q Consensus 565 ----------lig-~~~~~ce~-~~~yp~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~ 623 (666)
.|- ..||+.+. ++ .+..||+|.|..++.+..+ -....++.++.+.|||||++++...
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~-~~~~fDlI~crnvliyf~~-~~~~~vl~~~~~~L~pgG~L~lg~s 253 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYN-VPGPFDAIFCRNVMIYFDK-TTQEDILRRFVPLLKPDGLLFAGHS 253 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCC-CCCCEEEEEECSSGGGSCH-HHHHHHHHHHGGGEEEEEEEEECTT
T ss_pred ceeechhhcccCeEEecccCCCCCC-cCCCeeEEEECCchHhCCH-HHHHHHHHHHHHHhCCCcEEEEEec
Confidence 011 12566552 22 1378999999988876543 2346999999999999999999543
No 464
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.02 E-value=1.1e-05 Score=87.48 Aligned_cols=115 Identities=12% Similarity=0.059 Sum_probs=77.0
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhcc------------------------------------------
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP------------------------------------------ 294 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~------------------------------------------ 294 (666)
.++..|+.+..- ....+|||+|||+|.++..++.
T Consensus 182 ~lAa~ll~~~~~----~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 182 TLAAGLIYLTPW----KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp HHHHHHHHTSCC----CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred HHHHHHHHhhCC----CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 344455554431 2447899999999988766532
Q ss_pred CCeEEEeCCcchHHHHHHHHHHHcCCC--ceEEeecccCCCCCCCCeeEEEecccccccc---cChHHHHHHHHHhccC-
Q 005981 295 RNVITMSIAPKDVHENQIQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSRCRINWT---RDDGILLLEVNRMLRA- 368 (666)
Q Consensus 295 ~~V~gvDiS~~~l~~a~~~~a~~rg~~--~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~---~d~~~~L~el~RvLkP- 368 (666)
.+|+|+|+++.++..|+.+ +...++. ..+...|+.+++.+ .+||+|+|+-....-. .+...+.+++.++||+
T Consensus 258 ~~V~GvDid~~ai~~Ar~N-a~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~ 335 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIAREN-AEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKL 335 (385)
T ss_dssp CCEEEEESCHHHHHHHHHH-HHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTS
T ss_pred ceEEEEECCHHHHHHHHHH-HHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhC
Confidence 2599999999999888754 4445653 34556677777654 5899999875533221 2234667777778877
Q ss_pred -CeEEEEEEC
Q 005981 369 -GGYFAWAAQ 377 (666)
Q Consensus 369 -GG~lv~st~ 377 (666)
||.+++.+.
T Consensus 336 ~g~~~~iit~ 345 (385)
T 3ldu_A 336 KNWSYYLITS 345 (385)
T ss_dssp BSCEEEEEES
T ss_pred CCCEEEEEEC
Confidence 887777653
No 465
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.01 E-value=1.2e-05 Score=86.95 Aligned_cols=119 Identities=13% Similarity=0.166 Sum_probs=74.2
Q ss_pred CCeEEEECCCCchhHHHhcc---------------------CCeEEEeCCcchHHHHHHHH-------HHHcC--CCceE
Q 005981 275 IRVVMDAGCGVASFGAYLLP---------------------RNVITMSIAPKDVHENQIQF-------ALERG--APAMV 324 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~---------------------~~V~gvDiS~~~l~~a~~~~-------a~~rg--~~~~~ 324 (666)
.-+|+|+||++|..+..+.. -+|+..|+..+|.+...... ....| ....+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 46899999999966654321 15677788766654332221 12223 22344
Q ss_pred Eeec---ccCCCCCCCCeeEEEecccccccccChHH---------------------------------------HHHHH
Q 005981 325 AAFA---TRRLPYPSQAFDLIHCSRCRINWTRDDGI---------------------------------------LLLEV 362 (666)
Q Consensus 325 ~~~d---~e~Lpf~d~sFDlVv~s~~l~h~~~d~~~---------------------------------------~L~el 362 (666)
..+. ...-.|++++||+|+++.+ +||..+... +|+..
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYC-LHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESC-TTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecce-eeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332 3344588999999997766 889755321 15555
Q ss_pred HHhccCCeEEEEEECCCCCCH--H-----HHHHHHHHHHH
Q 005981 363 NRMLRAGGYFAWAAQPVYKHE--E-----AQEEHWKEMLD 395 (666)
Q Consensus 363 ~RvLkPGG~lv~st~P~~~~~--~-----el~~~w~~~~~ 395 (666)
++.|+|||.++++.. +.... . .+...|..|..
T Consensus 212 a~eL~pGG~mvl~~~-gr~~~~~~~~~~~~l~~al~~lv~ 250 (384)
T 2efj_A 212 SEELISRGRMLLTFI-CKEDEFDHPNSMDLLEMSINDLVI 250 (384)
T ss_dssp HHHEEEEEEEEEEEE-CCCTTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHhccCCeEEEEEe-cCCCcccCcccHHHHHHHHHHHHH
Confidence 899999999999964 33333 2 56666665543
No 466
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.01 E-value=8.9e-06 Score=84.83 Aligned_cols=139 Identities=9% Similarity=0.025 Sum_probs=80.9
Q ss_pred eeEeeccccchHHHHHHhhC-CCceEEEEeeccCC-CCChhHHHhc------cc----cccccccCCC-CCCCCCccceE
Q 005981 520 RNVLDMRAGFGGFAAALIEQ-KFDCWVMNVVPVSG-FNTLPVIYDR------GL----IGVMHDWCEP-FDTYPRTYDLL 586 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~-~~~vwvmnv~~~~~-~~~l~~~~er------Gl----ig~~~~~ce~-~~~yp~tyDli 586 (666)
.+|||+|||.|+++.+|++. +. .+|+.+|. +.+++.+.++ ++ +.+.+.-... ....+.+||+|
T Consensus 92 ~~VLdiG~G~G~~~~~l~~~~~~----~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 167 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVLKHDSV----EKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI 167 (296)
T ss_dssp CEEEEEECTTCHHHHHHTTSTTC----SEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred CEEEEEcCCcCHHHHHHHhcCCC----CEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEE
Confidence 67999999999999999987 32 24555553 4566666553 22 3333332111 22235789999
Q ss_pred Eecccccc-CCCC--CCHHHHHHHhhhcccCCeEEEEEe-----ChhHHHHHHHHHHhcCcEEEEEeccC--CCCCceEE
Q 005981 587 HAAGLFSV-ESKR--CNMSTIMLEMDRMLRPGGHVYIRD-----SIDVMDELQEIGKAMGWHVTLRETAE--GPHASYRI 656 (666)
Q Consensus 587 ha~~~f~~-~~~~--c~~~~~l~E~dRiLRPgG~~ii~d-----~~~~~~~~~~i~~~l~W~~~~~~~~~--~~~~~e~~ 656 (666)
.++ ++.. .... -....++.++.|+|||||.+++.- ..+....+.+.+++.--.+......- -+.+...+
T Consensus 168 i~d-~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f 246 (296)
T 1inl_A 168 IID-STDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSY 246 (296)
T ss_dssp EEE-C----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEE
T ss_pred EEc-CCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEE
Confidence 985 2222 1110 012588999999999999999972 12334444444444434444433211 12345778
Q ss_pred EEEEeCC
Q 005981 657 LTADKRL 663 (666)
Q Consensus 657 l~~~k~~ 663 (666)
++|.|++
T Consensus 247 ~~as~~~ 253 (296)
T 1inl_A 247 TFASKGI 253 (296)
T ss_dssp EEEESSC
T ss_pred EEecCCC
Confidence 8998863
No 467
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.01 E-value=1.9e-05 Score=82.47 Aligned_cols=133 Identities=12% Similarity=0.091 Sum_probs=75.5
Q ss_pred ccCCCceeeEeeccc------cchH-HHHHHhhCCCceEEEEeeccCCCCChhHHHhcccccc-ccccCCCCCCCCCccc
Q 005981 513 HWKKMKLRNVLDMRA------GFGG-FAAALIEQKFDCWVMNVVPVSGFNTLPVIYDRGLIGV-MHDWCEPFDTYPRTYD 584 (666)
Q Consensus 513 ~~~~~~iRnvlD~g~------G~Gg-faa~L~~~~~~vwvmnv~~~~~~~~l~~~~erGlig~-~~~~ce~~~~yp~tyD 584 (666)
.+..+. .|||+|| |.|+ .++.+...+. .|+.+|-...+ + ++ .+ .+..++.++ ++.+||
T Consensus 60 ~l~~g~--~VLDLGcGsg~~~GpGs~~~a~~~~~~~-----~V~gvDis~~v----~-~v-~~~i~gD~~~~~-~~~~fD 125 (290)
T 2xyq_A 60 AVPYNM--RVIHFGAGSDKGVAPGTAVLRQWLPTGT-----LLVDSDLNDFV----S-DA-DSTLIGDCATVH-TANKWD 125 (290)
T ss_dssp CCCTTC--EEEEESCCCTTSBCHHHHHHHHHSCTTC-----EEEEEESSCCB----C-SS-SEEEESCGGGCC-CSSCEE
T ss_pred CCCCCC--EEEEeCCCCCCCCCcHHHHHHHHcCCCC-----EEEEEECCCCC----C-CC-EEEEECccccCC-ccCccc
Confidence 344443 4999999 5576 2222333223 34445532222 2 33 23 333333332 347999
Q ss_pred eEEeccccccC--------CCCCCHHHHHHHhhhcccCCeEEEEEeCh-hHHHHHHHHHHhcCcE-EEEEeccCCCCCce
Q 005981 585 LLHAAGLFSVE--------SKRCNMSTIMLEMDRMLRPGGHVYIRDSI-DVMDELQEIGKAMGWH-VTLRETAEGPHASY 654 (666)
Q Consensus 585 liha~~~f~~~--------~~~c~~~~~l~E~dRiLRPgG~~ii~d~~-~~~~~~~~i~~~l~W~-~~~~~~~~~~~~~e 654 (666)
+|.|+...... .....++.++.|+.|+|||||+|++.... .....+.++++...|. +... .......|
T Consensus 126 ~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~--asr~~s~e 203 (290)
T 2xyq_A 126 LIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVT--NVNASSSE 203 (290)
T ss_dssp EEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEE--GGGTTSSC
T ss_pred EEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEE--EcCCCchh
Confidence 99996432211 11122458999999999999999996522 2335777788877554 4444 12234578
Q ss_pred EEEEEEe
Q 005981 655 RILTADK 661 (666)
Q Consensus 655 ~~l~~~k 661 (666)
.+|+|+.
T Consensus 204 ~~lv~~~ 210 (290)
T 2xyq_A 204 AFLIGAN 210 (290)
T ss_dssp EEEEEEE
T ss_pred eEEecCC
Confidence 8998875
No 468
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.01 E-value=1.5e-06 Score=85.31 Aligned_cols=128 Identities=12% Similarity=0.098 Sum_probs=90.3
Q ss_pred eeeEeeccccchHHHHHHhhC--CCceEEEEeeccC-CCCChhHHHhc----ccc-ccccccCCCC-CCCCCccceEEec
Q 005981 519 LRNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVS-GFNTLPVIYDR----GLI-GVMHDWCEPF-DTYPRTYDLLHAA 589 (666)
Q Consensus 519 iRnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~-~~~~l~~~~er----Gli-g~~~~~ce~~-~~yp~tyDliha~ 589 (666)
-.+|||+|||+|.+|.+++.. ++ .|+.+| ++.+++++.++ |+- .+-+ ++.. ...|.+||+|-+.
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a-----~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~ 122 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKI-----IYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLL 122 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCC-----EEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCC-----EEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHh
Confidence 447999999999999999776 44 566666 46788888765 332 1222 2211 1235899999999
Q ss_pred cccccCCCCCCHHHHHHHhhhcccCCeEEEEEeChh-----------HHHHHHHHHHhcCcEEEEEeccCCCCCceEEEE
Q 005981 590 GLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSID-----------VMDELQEIGKAMGWHVTLRETAEGPHASYRILT 658 (666)
Q Consensus 590 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~-----------~~~~~~~i~~~l~W~~~~~~~~~~~~~~e~~l~ 658 (666)
.++.+..++ +..+..+-+.|||||.||--++.. ..+..++.+..=.|.+...... .|-+-+
T Consensus 123 k~LHlL~~~---~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~~~-----nEl~y~ 194 (200)
T 3fzg_A 123 KMLPVLKQQ---DVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVIG-----NELVYI 194 (200)
T ss_dssp TCHHHHHHT---TCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEEET-----TEEEEE
T ss_pred hHHHhhhhh---HHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeeeeC-----ceEEEE
Confidence 888877544 467779999999999999987321 3567777788888888766653 366666
Q ss_pred EEe
Q 005981 659 ADK 661 (666)
Q Consensus 659 ~~k 661 (666)
.+|
T Consensus 195 ~~~ 197 (200)
T 3fzg_A 195 TSG 197 (200)
T ss_dssp ECC
T ss_pred Eec
Confidence 655
No 469
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.00 E-value=1.3e-05 Score=84.75 Aligned_cols=138 Identities=13% Similarity=0.118 Sum_probs=81.5
Q ss_pred eeeEeeccccchHHHHHHhh-C-CCceEEEEeeccCC-CCChhHHHhc-cc-----cccccccCCCC-CCCC-CccceEE
Q 005981 519 LRNVLDMRAGFGGFAAALIE-Q-KFDCWVMNVVPVSG-FNTLPVIYDR-GL-----IGVMHDWCEPF-DTYP-RTYDLLH 587 (666)
Q Consensus 519 iRnvlD~g~G~Ggfaa~L~~-~-~~~vwvmnv~~~~~-~~~l~~~~er-Gl-----ig~~~~~ce~~-~~yp-~tyDlih 587 (666)
-.+|||+|||.|+++.+|++ . ++ .|+-++- +.+++.+.++ ++ +.+++.-...+ ..++ ++||+|.
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~-----~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi 164 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQS-----RNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVII 164 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTC-----EEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEE
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCc-----EEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEE
Confidence 34799999999999999998 3 33 3444442 5677777665 21 33443332222 2344 7999999
Q ss_pred eccccccCCCCCC--HHHHHHHhhhcccCCeEEEEEe--Ch--hHHHH-HHHHHHhcCcEEEEEec-c--CCCCCceEEE
Q 005981 588 AAGLFSVESKRCN--MSTIMLEMDRMLRPGGHVYIRD--SI--DVMDE-LQEIGKAMGWHVTLRET-A--EGPHASYRIL 657 (666)
Q Consensus 588 a~~~f~~~~~~c~--~~~~l~E~dRiLRPgG~~ii~d--~~--~~~~~-~~~i~~~l~W~~~~~~~-~--~~~~~~e~~l 657 (666)
++ +|......-. -..++.++.|+|||||.+++.- .. +.... ++.+.+.+. .+.+... . .|......||
T Consensus 165 ~D-~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~-~v~~~~~~~~~~g~~~gN~Vl 242 (317)
T 3gjy_A 165 RD-VFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFE-HVAVIADPPMLKGRRYGNIIL 242 (317)
T ss_dssp EC-CSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCS-EEEEEECHHHHTTSSCEEEEE
T ss_pred EC-CCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCC-ceEEEEecCCCCCCcCceEEE
Confidence 86 4443221111 1589999999999999999952 22 22333 333333343 3443321 1 1222346789
Q ss_pred EEEeCC
Q 005981 658 TADKRL 663 (666)
Q Consensus 658 ~~~k~~ 663 (666)
+|.|.-
T Consensus 243 ~As~~p 248 (317)
T 3gjy_A 243 MGSDTE 248 (317)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 998854
No 470
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.99 E-value=2.6e-05 Score=84.54 Aligned_cols=102 Identities=11% Similarity=0.015 Sum_probs=71.9
Q ss_pred CCCeEEEECCCCchhHHHhcc------------------------------------------CCeEEEeCCcchHHHHH
Q 005981 274 HIRVVMDAGCGVASFGAYLLP------------------------------------------RNVITMSIAPKDVHENQ 311 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~------------------------------------------~~V~gvDiS~~~l~~a~ 311 (666)
....+||.+||+|+++...+. .+|+|+|+++.++..++
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 347899999999988765542 13999999999998887
Q ss_pred HHHHHHcCCC--ceEEeecccCCCCCCCCeeEEEeccccccccc---ChHHHHHHHHHhccC--CeEEEEEEC
Q 005981 312 IQFALERGAP--AMVAAFATRRLPYPSQAFDLIHCSRCRINWTR---DDGILLLEVNRMLRA--GGYFAWAAQ 377 (666)
Q Consensus 312 ~~~a~~rg~~--~~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~~---d~~~~L~el~RvLkP--GG~lv~st~ 377 (666)
. .+...|+. ..+...|+.+++.+ .+||+|+++--...-.. +...+.+++.+.||+ ||.+++.+.
T Consensus 274 ~-Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 274 K-NAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp H-HHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred H-HHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 4 45556664 34556677777765 58999998744322222 234667777778877 888877764
No 471
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.99 E-value=2.7e-06 Score=87.47 Aligned_cols=119 Identities=14% Similarity=0.110 Sum_probs=73.2
Q ss_pred hcccCCCceeeEeeccccchHHHHHHhhC--C-CceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCCCC-
Q 005981 511 ALHWKKMKLRNVLDMRAGFGGFAAALIEQ--K-FDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFDTY- 579 (666)
Q Consensus 511 ~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~--~-~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~~y- 579 (666)
.+.+..+. .|||+|||.|+++.+|++. + . .|+.+|. +.+++.+.++ |+ +.+.+...+.+...
T Consensus 78 ~l~~~~g~--~VLDlgaG~G~~t~~la~~~~~~~-----~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~ 150 (274)
T 3ajd_A 78 VLNPREDD--FILDMCAAPGGKTTHLAQLMKNKG-----TIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYL 150 (274)
T ss_dssp HHCCCTTC--EEEETTCTTCHHHHHHHHHTTTCS-----EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH
T ss_pred HhCCCCcC--EEEEeCCCccHHHHHHHHHcCCCC-----EEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhh
Confidence 34455553 5999999999999999873 3 3 4555663 4566665554 54 33443332222221
Q ss_pred ---CCccceEEeccccccCCC---------------CCCHHHHHHHhhhcccCCeEEEEEe----ChhHHHHHHHHHHh
Q 005981 580 ---PRTYDLLHAAGLFSVESK---------------RCNMSTIMLEMDRMLRPGGHVYIRD----SIDVMDELQEIGKA 636 (666)
Q Consensus 580 ---p~tyDliha~~~f~~~~~---------------~c~~~~~l~E~dRiLRPgG~~ii~d----~~~~~~~~~~i~~~ 636 (666)
+..||+|.++--++..+. .-....+|.++.|+|||||.++++. ..+..+.++.++++
T Consensus 151 ~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~ 229 (274)
T 3ajd_A 151 LKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQK 229 (274)
T ss_dssp HHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHH
T ss_pred hhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHh
Confidence 468999998733332110 0233689999999999999999962 22344555666644
No 472
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.99 E-value=1.2e-06 Score=86.60 Aligned_cols=92 Identities=14% Similarity=0.161 Sum_probs=59.5
Q ss_pred eeEeeccccchHHHHHHhhC-CCceEEEEeeccCC-CCChhHHHhc----c-------ccccccccCCCCCCCCCccceE
Q 005981 520 RNVLDMRAGFGGFAAALIEQ-KFDCWVMNVVPVSG-FNTLPVIYDR----G-------LIGVMHDWCEPFDTYPRTYDLL 586 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~-~~~vwvmnv~~~~~-~~~l~~~~er----G-------lig~~~~~ce~~~~yp~tyDli 586 (666)
..|||+|||.|.+++.|++. |.. .+|+.+|. +.+++.+.++ | -+.+.+...+....-+..||+|
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i 155 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCT---GKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAI 155 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTT---CEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEE
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCC---cEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEE
Confidence 36999999999999999876 311 14555553 4566665443 2 1333332222111113789999
Q ss_pred EeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC
Q 005981 587 HAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS 623 (666)
Q Consensus 587 ha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~ 623 (666)
++...+. .++.++.|+|||||.+++...
T Consensus 156 ~~~~~~~---------~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 156 HVGAAAP---------VVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EECSBBS---------SCCHHHHHTEEEEEEEEEEES
T ss_pred EECCchH---------HHHHHHHHhcCCCcEEEEEEe
Confidence 9986553 345788999999999999743
No 473
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.97 E-value=1e-05 Score=84.85 Aligned_cols=139 Identities=14% Similarity=0.148 Sum_probs=79.7
Q ss_pred eeeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc------cc----cccccccCCC-CCCCCCccceE
Q 005981 519 LRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR------GL----IGVMHDWCEP-FDTYPRTYDLL 586 (666)
Q Consensus 519 iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er------Gl----ig~~~~~ce~-~~~yp~tyDli 586 (666)
-++|||+|||.|+++.+|++.+ ++ .+|+-+|. +.+++++.++ |+ +.+.+.-... +...+.+||+|
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~-~~--~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHP-SV--ESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCT-TC--CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcC-CC--CEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 3689999999999999999873 11 24555553 4666666553 22 3333332222 12235899999
Q ss_pred EeccccccCCCC--CCHHHHHHHhhhcccCCeEEEEEe-C----hhHHHHHHHHHHhcCcEEEEEeccCCC---CCceEE
Q 005981 587 HAAGLFSVESKR--CNMSTIMLEMDRMLRPGGHVYIRD-S----IDVMDELQEIGKAMGWHVTLRETAEGP---HASYRI 656 (666)
Q Consensus 587 ha~~~f~~~~~~--c~~~~~l~E~dRiLRPgG~~ii~d-~----~~~~~~~~~i~~~l~W~~~~~~~~~~~---~~~e~~ 656 (666)
.++. +...... -....++.++.|+|||||.+++.. . .+....+.+.++++-=.+..... .-| .+...+
T Consensus 173 i~d~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~-~vP~~~~g~~g~ 250 (304)
T 2o07_A 173 ITDS-SDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYC-TIPTYPSGQIGF 250 (304)
T ss_dssp EEEC-C-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEE-ECTTSGGGEEEE
T ss_pred EECC-CCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEE-EeccccCcceEE
Confidence 9863 2221110 012478999999999999999974 1 23445555544444333433211 112 123567
Q ss_pred EEEEeC
Q 005981 657 LTADKR 662 (666)
Q Consensus 657 l~~~k~ 662 (666)
++|.|.
T Consensus 251 ~~as~~ 256 (304)
T 2o07_A 251 MLCSKN 256 (304)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 888875
No 474
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.96 E-value=9.1e-06 Score=85.67 Aligned_cols=138 Identities=13% Similarity=0.133 Sum_probs=78.0
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc------cc----cccccccCCC-CCCCCCccceEE
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR------GL----IGVMHDWCEP-FDTYPRTYDLLH 587 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er------Gl----ig~~~~~ce~-~~~yp~tyDlih 587 (666)
++|||+|||.|+++.+|++.. + +..|+.+|. +.+++++.++ |+ +.+.+.-... +..-+.+||+|.
T Consensus 110 ~~VLdIG~G~G~~~~~l~~~~-~--~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 110 KRVLIIGGGDGGILREVLKHE-S--VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp CEEEEESCTTSHHHHHHTTCT-T--CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHHcC-C--CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 679999999999999999872 1 125666663 5677777654 22 2233222111 111247899999
Q ss_pred eccccccCCC-CCCH-HHHHHHhhhcccCCeEEEEEe-----ChhHHHHHHHHHHhcCcEEEEEeccCCCC---CceEEE
Q 005981 588 AAGLFSVESK-RCNM-STIMLEMDRMLRPGGHVYIRD-----SIDVMDELQEIGKAMGWHVTLRETAEGPH---ASYRIL 657 (666)
Q Consensus 588 a~~~f~~~~~-~c~~-~~~l~E~dRiLRPgG~~ii~d-----~~~~~~~~~~i~~~l~W~~~~~~~~~~~~---~~e~~l 657 (666)
++. +..... .-.. ..++.++.|+|||||.+++.. ..+....+.+.++.+-=.+..... .-|. +...++
T Consensus 187 ~d~-~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~-~iP~~~~g~~g~~ 264 (314)
T 2b2c_A 187 TDS-SDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQS-IVSTYPSGSMGYL 264 (314)
T ss_dssp ECC-C-------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEE-ECTTSGGGEEEEE
T ss_pred EcC-CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEE-EecCcCCCceEEE
Confidence 863 332211 1112 588999999999999999973 123344444545544334443322 1121 223688
Q ss_pred EEEeC
Q 005981 658 TADKR 662 (666)
Q Consensus 658 ~~~k~ 662 (666)
+|.|.
T Consensus 265 ~ask~ 269 (314)
T 2b2c_A 265 ICAKN 269 (314)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 88775
No 475
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.96 E-value=2e-05 Score=76.46 Aligned_cols=115 Identities=17% Similarity=0.147 Sum_probs=81.2
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc-cccccccCCCCCCCCCccceEEeccccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL-IGVMHDWCEPFDTYPRTYDLLHAAGLFS 593 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl-ig~~~~~ce~~~~yp~tyDliha~~~f~ 593 (666)
..|||+|||.|.++.+|++.|.. +|+.+|. +.+++.+.++ |+ +.+.+...+. +|.+||+|.++..|.
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~~----~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~---~~~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGAK----EVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE---FNSRVDIVIMNPPFG 123 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS----EEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG---CCCCCSEEEECCCCS
T ss_pred CEEEEeeCCCCHHHHHHHHcCCC----EEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH---cCCCCCEEEEcCCCc
Confidence 46999999999999999998642 4666663 5667666654 32 4444444333 467999999987776
Q ss_pred cCCCCCCHHHHHHHhhhcccCCeEEEEE-eChhHHHHHHHHHHhcCcEEEEE
Q 005981 594 VESKRCNMSTIMLEMDRMLRPGGHVYIR-DSIDVMDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 594 ~~~~~c~~~~~l~E~dRiLRPgG~~ii~-d~~~~~~~~~~i~~~l~W~~~~~ 644 (666)
..... ....++.++.|+| ||.+++. ...+..+.+.+++....|++...
T Consensus 124 ~~~~~-~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 172 (207)
T 1wy7_A 124 SQRKH-ADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVTHR 172 (207)
T ss_dssp SSSTT-TTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEEEE
T ss_pred cccCC-chHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEEEE
Confidence 65433 2357888999999 6655544 36677888888888888887543
No 476
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.94 E-value=1e-05 Score=85.38 Aligned_cols=139 Identities=17% Similarity=0.181 Sum_probs=83.1
Q ss_pred eeEeeccccchHHHHHHhhC-CCceEEEEeeccCC-CCChhHHHhc------cc----cccccccCCC-CCCCCCccceE
Q 005981 520 RNVLDMRAGFGGFAAALIEQ-KFDCWVMNVVPVSG-FNTLPVIYDR------GL----IGVMHDWCEP-FDTYPRTYDLL 586 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~-~~~vwvmnv~~~~~-~~~l~~~~er------Gl----ig~~~~~ce~-~~~yp~tyDli 586 (666)
++|||+|||.|+++.+|++. +. .+|+.+|. +.+++++.++ |+ +.+.+..... ....+.+||+|
T Consensus 118 ~~VLdiG~G~G~~~~~l~~~~~~----~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 118 KNVLVVGGGDGGIIRELCKYKSV----ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp CEEEEEECTTCHHHHHHTTCTTC----CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CEEEEEcCCccHHHHHHHHcCCC----CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 57999999999999999987 21 25556663 5677777654 12 2233222111 11125789999
Q ss_pred EeccccccCCCCCCH--HHHHHHhhhcccCCeEEEEEe-----ChhHHHHHHHHHHhcCcEEEEEecc--CCCCCceEEE
Q 005981 587 HAAGLFSVESKRCNM--STIMLEMDRMLRPGGHVYIRD-----SIDVMDELQEIGKAMGWHVTLRETA--EGPHASYRIL 657 (666)
Q Consensus 587 ha~~~f~~~~~~c~~--~~~l~E~dRiLRPgG~~ii~d-----~~~~~~~~~~i~~~l~W~~~~~~~~--~~~~~~e~~l 657 (666)
.++. +......-.+ ..++.++.|+|||||.+++.. ..+....+.+.++..--.+...... .-+.+...++
T Consensus 194 i~d~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f~ 272 (321)
T 2pt6_A 194 IVDS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGIL 272 (321)
T ss_dssp EEEC-CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEE
T ss_pred EECC-cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEEE
Confidence 9863 2222111111 689999999999999999963 2234455555555554455444321 1112345678
Q ss_pred EEEeCC
Q 005981 658 TADKRL 663 (666)
Q Consensus 658 ~~~k~~ 663 (666)
+|.|.+
T Consensus 273 ~as~~~ 278 (321)
T 2pt6_A 273 CCSKTD 278 (321)
T ss_dssp EEESST
T ss_pred EeeCCC
Confidence 888764
No 477
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.93 E-value=3.7e-05 Score=80.83 Aligned_cols=102 Identities=9% Similarity=-0.034 Sum_probs=67.3
Q ss_pred CCCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHcCCCc-eEEeecccCCCCCC---CCeeEEEe
Q 005981 274 HIRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAPA-MVAAFATRRLPYPS---QAFDLIHC 344 (666)
Q Consensus 274 ~~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~rg~~~-~~~~~d~e~Lpf~d---~sFDlVv~ 344 (666)
++.+|||+|||+|..+..++. ..|+++|+++.++..++.+ ++..|+.. .+...|...++... ++||.|++
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n-~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATL-LARAGVSCCELAEEDFLAVSPSDPRYHEVHYILL 180 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHH-HHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH-HHHcCCCeEEEEeCChHhcCccccccCCCCEEEE
Confidence 457999999999988887765 2799999999988877644 44456543 44455665554322 57999996
Q ss_pred c----cc-cc------cc----c-cCh-------HHHHHHHHHhccCCeEEEEEEC
Q 005981 345 S----RC-RI------NW----T-RDD-------GILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 345 s----~~-l~------h~----~-~d~-------~~~L~el~RvLkPGG~lv~st~ 377 (666)
. .. .+ .| . .+. ..+|..+.++|+ ||.++++|-
T Consensus 181 D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 181 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp CCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred cCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECC
Confidence 2 11 11 01 1 111 145777777787 999999874
No 478
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.92 E-value=6.1e-06 Score=82.31 Aligned_cols=97 Identities=19% Similarity=0.183 Sum_probs=63.4
Q ss_pred HHhcccCCCceeeEeeccccchHHHHHHhhCC-CceEEEEeeccC-CCCChhHHHhc----cc--cccccccCCCCCCCC
Q 005981 509 VRALHWKKMKLRNVLDMRAGFGGFAAALIEQK-FDCWVMNVVPVS-GFNTLPVIYDR----GL--IGVMHDWCEPFDTYP 580 (666)
Q Consensus 509 ~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~-~~vwvmnv~~~~-~~~~l~~~~er----Gl--ig~~~~~ce~~~~yp 580 (666)
.+.+.+..+ .+|||+|||.|.+++.|++.+ . +|+.+| ++.+++.+.++ |+ +.+...-. ...++
T Consensus 84 ~~~l~~~~~--~~vLdiG~G~G~~~~~la~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~--~~~~~ 154 (235)
T 1jg1_A 84 LEIANLKPG--MNILEVGTGSGWNAALISEIVKT-----DVYTIERIPELVEFAKRNLERAGVKNVHVILGDG--SKGFP 154 (235)
T ss_dssp HHHHTCCTT--CCEEEECCTTSHHHHHHHHHHCS-----CEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG--GGCCG
T ss_pred HHhcCCCCC--CEEEEEeCCcCHHHHHHHHHhCC-----EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc--ccCCC
Confidence 344444444 369999999999999999874 4 455555 34566666554 43 33332221 22334
Q ss_pred --CccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC
Q 005981 581 --RTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS 623 (666)
Q Consensus 581 --~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~ 623 (666)
..||+|.+...+.+.. .++.|+|||||.+++.-.
T Consensus 155 ~~~~fD~Ii~~~~~~~~~---------~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 155 PKAPYDVIIVTAGAPKIP---------EPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp GGCCEEEEEECSBBSSCC---------HHHHHTEEEEEEEEEEEC
T ss_pred CCCCccEEEECCcHHHHH---------HHHHHhcCCCcEEEEEEe
Confidence 3499999986665432 378899999999999744
No 479
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.92 E-value=5.7e-06 Score=89.90 Aligned_cols=119 Identities=17% Similarity=0.295 Sum_probs=74.5
Q ss_pred eEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----ccc-ccccccCCC-CCCCCCccceEEeccc-c
Q 005981 521 NVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GLI-GVMHDWCEP-FDTYPRTYDLLHAAGL-F 592 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gli-g~~~~~ce~-~~~yp~tyDliha~~~-f 592 (666)
.|||+|||+|+|+.+++..|. .|+.+|. +.+++.+.++ |+- .+.+..+.. ...++..||+|.++-- |
T Consensus 217 ~VLDlg~GtG~~sl~~a~~ga-----~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 217 RVLDVYSYVGGFALRAARKGA-----YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp EEEEESCTTTHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred eEEEcccchhHHHHHHHHcCC-----eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 599999999999999999987 3566663 5666665543 442 122222211 2223545999998632 2
Q ss_pred ccCCC-----CCCHHHHHHHhhhcccCCeEEEEEeC------hhHHHHHHHHHHhcCcEEEEE
Q 005981 593 SVESK-----RCNMSTIMLEMDRMLRPGGHVYIRDS------IDVMDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 593 ~~~~~-----~c~~~~~l~E~dRiLRPgG~~ii~d~------~~~~~~~~~i~~~l~W~~~~~ 644 (666)
..... ......++.++-|+|||||++++... .+..+.+++.+...+.++.+.
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~ 354 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRVH 354 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEEE
Confidence 21111 01235788899999999999996522 234566777776666555443
No 480
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.92 E-value=2e-05 Score=76.28 Aligned_cols=111 Identities=16% Similarity=0.028 Sum_probs=72.8
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhcc-ccccccccCCCCCCCCCccceEEeccccccCCC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRG-LIGVMHDWCEPFDTYPRTYDLLHAAGLFSVESK 597 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erG-lig~~~~~ce~~~~yp~tyDliha~~~f~~~~~ 597 (666)
..|||+|||.|.++.+|++.|.. .|+.+|. +.+++.+.++- -+.+.+...+. +|.+||+|.++..|.+..+
T Consensus 53 ~~vlD~gcG~G~~~~~l~~~~~~----~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~---~~~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 53 RSVIDAGTGNGILACGSYLLGAE----SVTAFDIDPDAIETAKRNCGGVNFMVADVSE---ISGKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp SEEEEETCTTCHHHHHHHHTTBS----EEEEEESCHHHHHHHHHHCTTSEEEECCGGG---CCCCEEEEEECCCC-----
T ss_pred CEEEEEeCCccHHHHHHHHcCCC----EEEEEECCHHHHHHHHHhcCCCEEEECcHHH---CCCCeeEEEECCCchhccC
Confidence 46999999999999999988641 4666663 57788877763 13344433333 4589999999988877654
Q ss_pred CCCHHHHHHHhhhcccCCeEEEEEeChhHHHHHHHHHHhcCcEEE
Q 005981 598 RCNMSTIMLEMDRMLRPGGHVYIRDSIDVMDELQEIGKAMGWHVT 642 (666)
Q Consensus 598 ~c~~~~~l~E~dRiLRPgG~~ii~d~~~~~~~~~~i~~~l~W~~~ 642 (666)
.. ...++.++-|+| |+.+++. +......+.+++.... ++.
T Consensus 126 ~~-~~~~l~~~~~~~--g~~~~~~-~~~~~~~~~~~~~~~g-~~~ 165 (200)
T 1ne2_A 126 HS-DRAFIDKAFETS--MWIYSIG-NAKARDFLRREFSARG-DVF 165 (200)
T ss_dssp ---CHHHHHHHHHHE--EEEEEEE-EGGGHHHHHHHHHHHE-EEE
T ss_pred ch-hHHHHHHHHHhc--CcEEEEE-cCchHHHHHHHHHHCC-CEE
Confidence 32 247888999998 5544444 4455677777777766 543
No 481
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.92 E-value=1.9e-05 Score=84.78 Aligned_cols=115 Identities=11% Similarity=0.053 Sum_probs=79.1
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCC-CCC-CCCccceEEecc
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEP-FDT-YPRTYDLLHAAG 590 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~-~~~-yp~tyDliha~~ 590 (666)
..|||+| |.|.++.+|+..+.. ..|+.+|. +.+++.+.++ |+ +.+++...+. ++. .+.+||+|.++.
T Consensus 174 ~~VLDlG-G~G~~~~~la~~~~~---~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 174 KDIFVLG-DDDLTSIALMLSGLP---KRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp CEEEEES-CTTCHHHHHHHHTCC---SEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CEEEEEC-CCCHHHHHHHHhCCC---CEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 5699999 999999999887421 15666774 6788777665 65 5555443333 443 346999999986
Q ss_pred ccccCCCCCCHHHHHHHhhhcccCCe-EEEEEeC-----hhHHHHHHHHHH-hcCcEEE
Q 005981 591 LFSVESKRCNMSTIMLEMDRMLRPGG-HVYIRDS-----IDVMDELQEIGK-AMGWHVT 642 (666)
Q Consensus 591 ~f~~~~~~c~~~~~l~E~dRiLRPgG-~~ii~d~-----~~~~~~~~~i~~-~l~W~~~ 642 (666)
.|.... ...++.++.|+||||| .+++.-. .+....+++++. .+.+++.
T Consensus 250 p~~~~~----~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 304 (373)
T 2qm3_A 250 PETLEA----IRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVIT 304 (373)
T ss_dssp CSSHHH----HHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEEE
T ss_pred CCchHH----HHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcchh
Confidence 665432 4789999999999999 4355422 223367778777 7777653
No 482
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.91 E-value=9.8e-06 Score=85.22 Aligned_cols=138 Identities=15% Similarity=0.126 Sum_probs=81.6
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc------c-c----cccccccCCCC-CCCCCccceE
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR------G-L----IGVMHDWCEPF-DTYPRTYDLL 586 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er------G-l----ig~~~~~ce~~-~~yp~tyDli 586 (666)
++|||+|||.|+++.+|++.. + +.+|+.+|. +.+++.+.++ | + +.+.+.-...+ ...+.+||+|
T Consensus 79 ~~VLdiG~G~G~~~~~l~~~~-~--~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 79 KRVLIVGGGEGATLREVLKHP-T--VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CEEEEEECTTSHHHHHHTTST-T--CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CeEEEEcCCcCHHHHHHHhcC-C--CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 679999999999999999872 1 124555553 4566666543 2 1 33333222221 1125799999
Q ss_pred EeccccccC---CCCCC--HHHHHHHhhhcccCCeEEEEEe------ChhHHHHHHHHHHhcCcEEEEEeccCCC--CCc
Q 005981 587 HAAGLFSVE---SKRCN--MSTIMLEMDRMLRPGGHVYIRD------SIDVMDELQEIGKAMGWHVTLRETAEGP--HAS 653 (666)
Q Consensus 587 ha~~~f~~~---~~~c~--~~~~l~E~dRiLRPgG~~ii~d------~~~~~~~~~~i~~~l~W~~~~~~~~~~~--~~~ 653 (666)
.++.. .+. ...-. ...++.++.|+|||||.+++.- ..+....+.+.++..--.+...... -| .+.
T Consensus 156 i~d~~-~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~-vP~~~g~ 233 (314)
T 1uir_A 156 IIDLT-DPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNH-IPGFFLN 233 (314)
T ss_dssp EEECC-CCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEE-EGGGTEE
T ss_pred EECCC-CcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEe-cCCCCCe
Confidence 99743 322 11000 2689999999999999999962 1234555555565554444332210 01 124
Q ss_pred eEEEEEEeC
Q 005981 654 YRILTADKR 662 (666)
Q Consensus 654 e~~l~~~k~ 662 (666)
..+++|.|.
T Consensus 234 ~~~~~as~~ 242 (314)
T 1uir_A 234 FGFLLASDA 242 (314)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEECC
Confidence 567888886
No 483
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.90 E-value=1e-05 Score=87.54 Aligned_cols=97 Identities=16% Similarity=0.127 Sum_probs=68.7
Q ss_pred CCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHc--------------CCC-ceEEeecccCCC-C
Q 005981 275 IRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALER--------------GAP-AMVAAFATRRLP-Y 334 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~r--------------g~~-~~~~~~d~e~Lp-f 334 (666)
+.+|||+|||+|.++..++.+ +|+++|+++..+..++.+..... ++. ..+...|+..+. .
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 368999999999988877653 79999999998888776554431 544 334444433321 1
Q ss_pred CCCCeeEEEecccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 335 PSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 335 ~d~sFDlVv~s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
..+.||+|++.- . .....++..+.+.||+||.++++.
T Consensus 128 ~~~~fD~I~lDP----~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 128 RHRYFHFIDLDP----F-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp STTCEEEEEECC----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCEEEeCC----C-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 135799999432 1 234688999999999999988874
No 484
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.90 E-value=5.5e-06 Score=91.06 Aligned_cols=109 Identities=8% Similarity=0.118 Sum_probs=67.6
Q ss_pred HHHHHHhcccCCCceeeEeeccccchHHHHHHhhC-CCceEEEEeeccCC-CCChhHH-------Hh----ccc----cc
Q 005981 505 IESYVRALHWKKMKLRNVLDMRAGFGGFAAALIEQ-KFDCWVMNVVPVSG-FNTLPVI-------YD----RGL----IG 567 (666)
Q Consensus 505 v~~Y~~~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~-~~~vwvmnv~~~~~-~~~l~~~-------~e----rGl----ig 567 (666)
+....+.+++..+. .|||+|||+|.+++.|++. |+. .|+.+|. +.++..| .+ .|+ +.
T Consensus 231 v~~ml~~l~l~~g~--~VLDLGCGsG~la~~LA~~~g~~----~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~ 304 (433)
T 1u2z_A 231 LSDVYQQCQLKKGD--TFMDLGSGVGNCVVQAALECGCA----LSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVE 304 (433)
T ss_dssp HHHHHHHTTCCTTC--EEEEESCTTSHHHHHHHHHHCCS----EEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEE
T ss_pred HHHHHHhcCCCCCC--EEEEeCCCcCHHHHHHHHHCCCC----EEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceE
Confidence 34455556655553 5999999999999999986 531 3444442 3344444 43 352 33
Q ss_pred ccc--ccCCC--CCCCCCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC
Q 005981 568 VMH--DWCEP--FDTYPRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS 623 (666)
Q Consensus 568 ~~~--~~ce~--~~~yp~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~ 623 (666)
+.+ +..+. |.....+||+|.++..+ +. -++..+|.|+.|+|||||.+++.|.
T Consensus 305 ~i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~---~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 305 FSLKKSFVDNNRVAELIPQCDVILVNNFL-FD---EDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp EEESSCSTTCHHHHHHGGGCSEEEECCTT-CC---HHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred EEEcCccccccccccccCCCCEEEEeCcc-cc---ccHHHHHHHHHHhCCCCeEEEEeec
Confidence 333 12110 11113689999986443 11 2456889999999999999999853
No 485
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.89 E-value=2.5e-06 Score=84.23 Aligned_cols=93 Identities=12% Similarity=0.130 Sum_probs=60.1
Q ss_pred eeEeeccccchHHHHHHhhCCC----ceEEEEeeccCC-CCChhHHHhc----cc-------cccccccCCCCC----CC
Q 005981 520 RNVLDMRAGFGGFAAALIEQKF----DCWVMNVVPVSG-FNTLPVIYDR----GL-------IGVMHDWCEPFD----TY 579 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~----~vwvmnv~~~~~-~~~l~~~~er----Gl-------ig~~~~~ce~~~----~y 579 (666)
.+|||+|||.|.+++.|++... +- .+|+.+|. +.+++.+.++ |+ +.+.+...+... .-
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKN--SYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTT--CEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCC--CEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 3699999999999999988631 00 13555553 4566666554 31 333332222211 11
Q ss_pred CCccceEEeccccccCCCCCCHHHHHHHhhhcccCCeEEEEEeC
Q 005981 580 PRTYDLLHAAGLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDS 623 (666)
Q Consensus 580 p~tyDliha~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~ 623 (666)
...||+|++...+.+ ++.++.++|||||.+++.-.
T Consensus 160 ~~~fD~I~~~~~~~~---------~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 160 LGLFDAIHVGASASE---------LPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HCCEEEEEECSBBSS---------CCHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCEEEECCchHH---------HHHHHHHhcCCCcEEEEEEc
Confidence 278999999866543 45788999999999999743
No 486
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.89 E-value=1.6e-05 Score=84.49 Aligned_cols=99 Identities=16% Similarity=0.172 Sum_probs=64.4
Q ss_pred eeeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc------cc----cccccccCCC-CCCCC-Cccce
Q 005981 519 LRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR------GL----IGVMHDWCEP-FDTYP-RTYDL 585 (666)
Q Consensus 519 iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er------Gl----ig~~~~~ce~-~~~yp-~tyDl 585 (666)
-++|||+|||.|+++.+|++.. ++ .+|+.+|. +.+++++.++ |+ +.+.+.-... +..++ .+||+
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~-~~--~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHA-SI--EQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCT-TC--CEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCEEEEECCCccHHHHHHHHcC-CC--CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 4689999999999999999872 11 25566663 5677776653 33 3333332222 22233 79999
Q ss_pred EEeccccccCCCCCC--HHHHHHHhhhcccCCeEEEEE
Q 005981 586 LHAAGLFSVESKRCN--MSTIMLEMDRMLRPGGHVYIR 621 (666)
Q Consensus 586 iha~~~f~~~~~~c~--~~~~l~E~dRiLRPgG~~ii~ 621 (666)
|.++.. ......-. ...++.++.|+|||||.+++.
T Consensus 198 Ii~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 198 VIVDSS-DPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEECCC-CTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCC-CccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 998632 21111001 258999999999999999996
No 487
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.88 E-value=2.4e-06 Score=86.14 Aligned_cols=96 Identities=16% Similarity=0.122 Sum_probs=54.9
Q ss_pred eeEeeccccchHHHHHHhhC--CCceEEEEeeccCC-CCChhHHHhc----cc---cccccccCCC--CCCCC----Ccc
Q 005981 520 RNVLDMRAGFGGFAAALIEQ--KFDCWVMNVVPVSG-FNTLPVIYDR----GL---IGVMHDWCEP--FDTYP----RTY 583 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~--~~~vwvmnv~~~~~-~~~l~~~~er----Gl---ig~~~~~ce~--~~~yp----~ty 583 (666)
..|||+|||+|.++.+|+.+ +. .|+.+|. +.+++.+.++ |+ +.+++..++. +..++ .+|
T Consensus 67 ~~vLDlG~G~G~~~~~la~~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 67 RRGIDIGTGASCIYPLLGATLNGW-----YFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CEEEEESCTTTTHHHHHHHHHHCC-----EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CEEEEeCCChhHHHHHHHHhCCCC-----eEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcc
Confidence 46999999999999999876 44 5666663 5677666554 44 4555544332 22333 589
Q ss_pred ceEEeccccccCCC-------C-----CCHHHHHHHhhhcccCCeEEEE
Q 005981 584 DLLHAAGLFSVESK-------R-----CNMSTIMLEMDRMLRPGGHVYI 620 (666)
Q Consensus 584 Dliha~~~f~~~~~-------~-----c~~~~~l~E~dRiLRPgG~~ii 620 (666)
|+|.|+--|..... + .....++.++.|+|||||.+.+
T Consensus 142 D~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 142 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp SEEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred cEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 99999854432220 0 0112345566666666665544
No 488
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.87 E-value=1.4e-05 Score=85.70 Aligned_cols=120 Identities=12% Similarity=0.154 Sum_probs=76.0
Q ss_pred CCeEEEECCCCchhHHHhcc-----------------C---CeEEEeCCcchHHHHHHHHHHH-cCCCceEEee---ccc
Q 005981 275 IRVVMDAGCGVASFGAYLLP-----------------R---NVITMSIAPKDVHENQIQFALE-RGAPAMVAAF---ATR 330 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~-----------------~---~V~gvDiS~~~l~~a~~~~a~~-rg~~~~~~~~---d~e 330 (666)
.-+|+|+||++|..+..+.. . +|+..|+..+|.+......... ......+..+ ...
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 45799999999965543321 1 6888899999886654332210 0002233322 233
Q ss_pred CCCCCCCCeeEEEecccccccccChH---------------------------------HHHHHHHHhccCCeEEEEEEC
Q 005981 331 RLPYPSQAFDLIHCSRCRINWTRDDG---------------------------------ILLLEVNRMLRAGGYFAWAAQ 377 (666)
Q Consensus 331 ~Lpf~d~sFDlVv~s~~l~h~~~d~~---------------------------------~~L~el~RvLkPGG~lv~st~ 377 (666)
.-.|+++++|+|+++.+ +||..+.. .+|+..++.|+|||.++++..
T Consensus 132 ~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYS-LMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SCCSCTTCBSCEEEESC-TTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hccCCCCceEEEEehhh-hhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 45689999999997766 88975422 238888999999999999853
Q ss_pred CCCC----------CHHHHHHHHHHHHH
Q 005981 378 PVYK----------HEEAQEEHWKEMLD 395 (666)
Q Consensus 378 P~~~----------~~~el~~~w~~~~~ 395 (666)
.... -...+...|..|..
T Consensus 211 gr~~~~~~~~~~~~~~~~l~~al~~mv~ 238 (359)
T 1m6e_X 211 GRRSEDRASTECCLIWQLLAMALNQMVS 238 (359)
T ss_dssp ECSSSSSSSTTTSTTTHHHHHHHHHHHH
T ss_pred cCCCCCccccchHHHHHHHHHHHHHHHH
Confidence 1111 12356667766543
No 489
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.87 E-value=1.9e-05 Score=89.22 Aligned_cols=116 Identities=14% Similarity=0.090 Sum_probs=76.0
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCCCchhHHHhcc----------------------CCeEEEeCCcchHHHHHHHH
Q 005981 257 QYLDQIAKMVPDITWGHHIRVVMDAGCGVASFGAYLLP----------------------RNVITMSIAPKDVHENQIQF 314 (666)
Q Consensus 257 ~~i~~L~~~L~~i~~g~~~~~VLDIGCGtG~~a~~L~~----------------------~~V~gvDiS~~~l~~a~~~~ 314 (666)
.+++.|.+++.. ....+|||.|||+|.+...+.+ .+++|+|+++.++..|+.+.
T Consensus 156 ~iv~~mv~~l~p----~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl 231 (541)
T 2ar0_A 156 PLIKTIIHLLKP----QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNC 231 (541)
T ss_dssp HHHHHHHHHHCC----CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc----CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHH
Confidence 445555555542 3446899999999987755532 26999999999887776544
Q ss_pred HHHcCCC------ceEEeecccCCC-CCCCCeeEEEeccccccccc------------C-hHHHHHHHHHhccCCeEEEE
Q 005981 315 ALERGAP------AMVAAFATRRLP-YPSQAFDLIHCSRCRINWTR------------D-DGILLLEVNRMLRAGGYFAW 374 (666)
Q Consensus 315 a~~rg~~------~~~~~~d~e~Lp-f~d~sFDlVv~s~~l~h~~~------------d-~~~~L~el~RvLkPGG~lv~ 374 (666)
.. +++. ..+...|+...+ .....||+|+++-.+..... + ...++..+.+.|+|||.+++
T Consensus 232 ~l-~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~ 310 (541)
T 2ar0_A 232 LL-HDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAV 310 (541)
T ss_dssp HT-TTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred HH-hCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEE
Confidence 33 3443 234444433222 34578999998754332211 1 12688999999999999999
Q ss_pred EEC
Q 005981 375 AAQ 377 (666)
Q Consensus 375 st~ 377 (666)
..+
T Consensus 311 V~p 313 (541)
T 2ar0_A 311 VVP 313 (541)
T ss_dssp EEE
T ss_pred Eec
Confidence 864
No 490
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=97.84 E-value=1.1e-05 Score=87.28 Aligned_cols=117 Identities=9% Similarity=-0.013 Sum_probs=74.6
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc----cccccccCCCC-CCC---CCccceE
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL----IGVMHDWCEPF-DTY---PRTYDLL 586 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl----ig~~~~~ce~~-~~y---p~tyDli 586 (666)
..|||+|||+|+|+.++++.|+. .|+.+|. +.+++.+.++ |+ +.+++..++.+ +.. ..+||+|
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga~----~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGAM----ATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBS----EEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEEeeccCHHHHHHHHCCCC----EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 36999999999999999997641 4566663 5677666543 43 22333332221 111 2489999
Q ss_pred Eecccccc-----CCC-CCCHHHHHHHhhhcccCCeEEEEEeC------hhHHHHHHHHHHhcCcE
Q 005981 587 HAAGLFSV-----ESK-RCNMSTIMLEMDRMLRPGGHVYIRDS------IDVMDELQEIGKAMGWH 640 (666)
Q Consensus 587 ha~~~f~~-----~~~-~c~~~~~l~E~dRiLRPgG~~ii~d~------~~~~~~~~~i~~~l~W~ 640 (666)
.++--... ..+ ...+..++.++.|+|+|||.+++... ....+.+++.++..+++
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCE
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCc
Confidence 98633311 110 01234577888999999999999743 23466677778888887
No 491
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.83 E-value=4.9e-05 Score=83.78 Aligned_cols=124 Identities=14% Similarity=0.169 Sum_probs=78.3
Q ss_pred hcccCCCceeeEeeccccchHHHHHHhhC--C-CceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCCC-C
Q 005981 511 ALHWKKMKLRNVLDMRAGFGGFAAALIEQ--K-FDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFDT-Y 579 (666)
Q Consensus 511 ~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~--~-~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~~-y 579 (666)
.+++..+. .|||+|||.|+++.+|++. + . .|+.+|. +..+..+.++ |+ +.+.+...+.++. +
T Consensus 254 ~l~~~~g~--~VLDlgaG~G~~t~~la~~~~~~~-----~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~ 326 (450)
T 2yxl_A 254 VLDPKPGE--TVVDLAAAPGGKTTHLAELMKNKG-----KIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEII 326 (450)
T ss_dssp HHCCCTTC--EEEESSCTTCHHHHHHHHHTTTCS-----EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSS
T ss_pred hcCCCCcC--EEEEeCCCccHHHHHHHHHcCCCC-----EEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhh
Confidence 34555553 5999999999999999874 2 3 4666663 4666666555 65 4444433333332 5
Q ss_pred C-CccceEEec------cccccCCC------CCCH-------HHHHHHhhhcccCCeEEEEEe----ChhHHHHHHHHHH
Q 005981 580 P-RTYDLLHAA------GLFSVESK------RCNM-------STIMLEMDRMLRPGGHVYIRD----SIDVMDELQEIGK 635 (666)
Q Consensus 580 p-~tyDliha~------~~f~~~~~------~c~~-------~~~l~E~dRiLRPgG~~ii~d----~~~~~~~~~~i~~ 635 (666)
+ .+||+|.++ +++....+ .-++ ..+|.++.|+|||||.+++.+ ..+..+.++.+++
T Consensus 327 ~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~ 406 (450)
T 2yxl_A 327 GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLN 406 (450)
T ss_dssp CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHH
T ss_pred ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHH
Confidence 5 789999963 22221111 0112 478999999999999999863 3344556677776
Q ss_pred hc-CcEE
Q 005981 636 AM-GWHV 641 (666)
Q Consensus 636 ~l-~W~~ 641 (666)
+. .|+.
T Consensus 407 ~~~~~~~ 413 (450)
T 2yxl_A 407 VHPEFKL 413 (450)
T ss_dssp HCSSCEE
T ss_pred hCCCCEE
Confidence 65 4554
No 492
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.82 E-value=2e-05 Score=81.63 Aligned_cols=140 Identities=17% Similarity=0.166 Sum_probs=79.9
Q ss_pred eeeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhcc------c----cccccccCCCC-CCCCCccceE
Q 005981 519 LRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDRG------L----IGVMHDWCEPF-DTYPRTYDLL 586 (666)
Q Consensus 519 iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~erG------l----ig~~~~~ce~~-~~yp~tyDli 586 (666)
-++|||+|||.|+++.++++.+ + +.+|+-+|. +.+++.+.++- + +.+.+.-...+ ...+.+||+|
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~-~--~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYK-S--VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCT-T--CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcC-C--CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 3689999999999999999873 1 125555553 46666666541 1 22332222111 1125799999
Q ss_pred EeccccccCCCCCCH--HHHHHHhhhcccCCeEEEEEeC-----hhHHHHHHHHHHhcCcEEEEEeccCCC--CCceEEE
Q 005981 587 HAAGLFSVESKRCNM--STIMLEMDRMLRPGGHVYIRDS-----IDVMDELQEIGKAMGWHVTLRETAEGP--HASYRIL 657 (666)
Q Consensus 587 ha~~~f~~~~~~c~~--~~~l~E~dRiLRPgG~~ii~d~-----~~~~~~~~~i~~~l~W~~~~~~~~~~~--~~~e~~l 657 (666)
.++. +......-.+ ..++.++.|+|||||.+++... .+....+.+.+++.--.+......--. .+...++
T Consensus 156 i~d~-~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y~~g~~g~~ 234 (283)
T 2i7c_A 156 IVDS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGIL 234 (283)
T ss_dssp EEEC-CCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEE
T ss_pred EEcC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEEEEEEcCCcCCCcEEEE
Confidence 9863 2222211111 5899999999999999999732 233344444444443334332221111 1223577
Q ss_pred EEEeC
Q 005981 658 TADKR 662 (666)
Q Consensus 658 ~~~k~ 662 (666)
+|.|.
T Consensus 235 ~~s~~ 239 (283)
T 2i7c_A 235 CCSKT 239 (283)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 77765
No 493
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.81 E-value=0.00011 Score=76.61 Aligned_cols=117 Identities=16% Similarity=0.166 Sum_probs=75.9
Q ss_pred CCCCeEEEECCCCchhHHHhccC----CeEEEeCCcchHHHHHHHHHHHc-C----CCceEEeec-ccCCCCCCCCeeEE
Q 005981 273 HHIRVVMDAGCGVASFGAYLLPR----NVITMSIAPKDVHENQIQFALER-G----APAMVAAFA-TRRLPYPSQAFDLI 342 (666)
Q Consensus 273 ~~~~~VLDIGCGtG~~a~~L~~~----~V~gvDiS~~~l~~a~~~~a~~r-g----~~~~~~~~d-~e~Lpf~d~sFDlV 342 (666)
..+++||-||.|.|..++.+++. +|+.+|+++..+..++.-+.... + ....+...| .+-+.-..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 46789999999999999988875 79999999987766654333211 1 122333344 33344456889999
Q ss_pred EecccccccccC----hHHHHHHHHHhccCCeEEEEEECCCCCCHHHHHHHH
Q 005981 343 HCSRCRINWTRD----DGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQEEHW 390 (666)
Q Consensus 343 v~s~~l~h~~~d----~~~~L~el~RvLkPGG~lv~st~P~~~~~~el~~~w 390 (666)
+.- +....... ...+++.+.++|+|||.++......+.....+....
T Consensus 162 i~D-~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~ 212 (294)
T 3o4f_A 162 ISD-CTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSH 212 (294)
T ss_dssp EES-CCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHH
T ss_pred EEe-CCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHH
Confidence 953 32322111 137899999999999999986432233334444333
No 494
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.78 E-value=4.2e-05 Score=83.71 Aligned_cols=122 Identities=17% Similarity=0.189 Sum_probs=75.6
Q ss_pred hcccCCCceeeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc-cccccccCCCCCC-CC-Cc
Q 005981 511 ALHWKKMKLRNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL-IGVMHDWCEPFDT-YP-RT 582 (666)
Q Consensus 511 ~l~~~~~~iRnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl-ig~~~~~ce~~~~-yp-~t 582 (666)
.+....+. .|||+|||.|+++..|++..-+ ..|+.+|. +..+..+.++ |+ +.+.+.....+.. ++ ..
T Consensus 241 ~l~~~~g~--~VLDlgaG~G~~t~~la~~~~~---~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~ 315 (429)
T 1sqg_A 241 WLAPQNGE--HILDLCAAPGGKTTHILEVAPE---AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQ 315 (429)
T ss_dssp HHCCCTTC--EEEEESCTTCHHHHHHHHHCTT---CEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCC
T ss_pred HcCCCCcC--eEEEECCCchHHHHHHHHHcCC---CEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCC
Confidence 34455553 5999999999999999987311 25666663 5777776665 55 3334333222221 33 68
Q ss_pred cceEEecc------ccccCCC------CCCH-------HHHHHHhhhcccCCeEEEEEe----ChhHHHHHHHHHHhc
Q 005981 583 YDLLHAAG------LFSVESK------RCNM-------STIMLEMDRMLRPGGHVYIRD----SIDVMDELQEIGKAM 637 (666)
Q Consensus 583 yDliha~~------~f~~~~~------~c~~-------~~~l~E~dRiLRPgG~~ii~d----~~~~~~~~~~i~~~l 637 (666)
||+|.++- ++.+..+ ..++ ..+|.++-++|||||+++++. ..+..+.++.++++.
T Consensus 316 fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~ 393 (429)
T 1sqg_A 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRT 393 (429)
T ss_dssp EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred CCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhC
Confidence 99999642 2221111 0111 378999999999999999974 334455666666553
No 495
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.78 E-value=2.6e-05 Score=86.84 Aligned_cols=113 Identities=14% Similarity=0.196 Sum_probs=72.1
Q ss_pred eEeeccccchHHHHHHhhC---CCceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCCC-CCCccceEEec
Q 005981 521 NVLDMRAGFGGFAAALIEQ---KFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFDT-YPRTYDLLHAA 589 (666)
Q Consensus 521 nvlD~g~G~Ggfaa~L~~~---~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~~-yp~tyDliha~ 589 (666)
.|||||||.|+.+.+|++. +. .|+.+|. +.++..+.++ |+ +.+.+...+.+.. .+.+||+|.++
T Consensus 120 ~VLDl~aGpG~kt~~lA~~~~~~g-----~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D 194 (479)
T 2frx_A 120 RVMDVAAAPGSKTTQISARMNNEG-----AILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLD 194 (479)
T ss_dssp EEEESSCTTSHHHHHHHHHTTTCS-----EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEE
T ss_pred EEEEeCCCCCHHHHHHHHhCCCCC-----EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEEC
Confidence 5999999999999999875 12 3666663 5666666554 55 4445444444433 45799999974
Q ss_pred ------cccccCCCCC---C----------HHHHHHHhhhcccCCeEEEEEe----ChhHHHHHHHHHHhcC
Q 005981 590 ------GLFSVESKRC---N----------MSTIMLEMDRMLRPGGHVYIRD----SIDVMDELQEIGKAMG 638 (666)
Q Consensus 590 ------~~f~~~~~~c---~----------~~~~l~E~dRiLRPgG~~ii~d----~~~~~~~~~~i~~~l~ 638 (666)
++|....+.. . -..+|.++-|+|||||.++++. ..+.-+.++.++++..
T Consensus 195 ~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 195 APCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYP 266 (479)
T ss_dssp CCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHST
T ss_pred CCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHCC
Confidence 3333211110 0 1378999999999999999962 2333445566666554
No 496
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.78 E-value=2.9e-05 Score=84.36 Aligned_cols=96 Identities=13% Similarity=0.078 Sum_probs=69.0
Q ss_pred CCeEEEECCCCchhHHHhcc-----CCeEEEeCCcchHHHHHHHHHHHcCCCc---eEEeecccCC-C-CCCCCeeEEEe
Q 005981 275 IRVVMDAGCGVASFGAYLLP-----RNVITMSIAPKDVHENQIQFALERGAPA---MVAAFATRRL-P-YPSQAFDLIHC 344 (666)
Q Consensus 275 ~~~VLDIGCGtG~~a~~L~~-----~~V~gvDiS~~~l~~a~~~~a~~rg~~~---~~~~~d~e~L-p-f~d~sFDlVv~ 344 (666)
+.+|||++||+|.++..++. ..|+++|+++..+..++. .++..++.. .+...|+..+ . ...+.||+|++
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~-N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKE-NFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHH-HHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 46899999999999988776 279999999988877764 455556643 3444443221 1 11467999996
Q ss_pred cccccccccChHHHHHHHHHhccCCeEEEEEE
Q 005981 345 SRCRINWTRDDGILLLEVNRMLRAGGYFAWAA 376 (666)
Q Consensus 345 s~~l~h~~~d~~~~L~el~RvLkPGG~lv~st 376 (666)
.- + .....++..+.+.|++||+++++.
T Consensus 132 DP----~-g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP----F-GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC----C-cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 54 2 234578999999999999988875
No 497
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.76 E-value=6e-05 Score=86.36 Aligned_cols=115 Identities=16% Similarity=0.089 Sum_probs=69.4
Q ss_pred HHHHHHHHhhcc----cccCCCCCCeEEEECCCCchhHH---HhccC-----CeEEEeCCcchHHHHHHHHHHHcCCCc-
Q 005981 256 DQYLDQIAKMVP----DITWGHHIRVVMDAGCGVASFGA---YLLPR-----NVITMSIAPKDVHENQIQFALERGAPA- 322 (666)
Q Consensus 256 ~~~i~~L~~~L~----~i~~g~~~~~VLDIGCGtG~~a~---~L~~~-----~V~gvDiS~~~l~~a~~~~a~~rg~~~- 322 (666)
+.|-+.|.+.+. +.........|||||||+|.+.. ...++ +|++|+-++... .++ +..++++...
T Consensus 335 ~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~-~a~-~~v~~N~~~dk 412 (637)
T 4gqb_A 335 SQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAV-VTL-ENWQFEEWGSQ 412 (637)
T ss_dssp HHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHH-HHH-HHHHHHTTGGG
T ss_pred HHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHH-HHH-HHHHhccCCCe
Confidence 345555554433 22222334579999999997632 22222 689999998433 333 3344445443
Q ss_pred -eEEeecccCCCCCCCCeeEEEecccccccc-cChHHHHHHHHHhccCCeEEE
Q 005981 323 -MVAAFATRRLPYPSQAFDLIHCSRCRINWT-RDDGILLLEVNRMLRAGGYFA 373 (666)
Q Consensus 323 -~~~~~d~e~Lpf~d~sFDlVv~s~~l~h~~-~d~~~~L~el~RvLkPGG~lv 373 (666)
.+...+++++..+ +.+|+|++-.+-.... +.....|....|.|||||.++
T Consensus 413 VtVI~gd~eev~LP-EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 413 VTVVSSDMREWVAP-EKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEEESCTTTCCCS-SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEEeCcceeccCC-cccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 4555578888776 6899999643222111 223367778899999999863
No 498
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.76 E-value=8.8e-06 Score=87.74 Aligned_cols=120 Identities=18% Similarity=0.173 Sum_probs=76.0
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc--cccccccCCCCCC-C---CCccceEEe
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL--IGVMHDWCEPFDT-Y---PRTYDLLHA 588 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl--ig~~~~~ce~~~~-y---p~tyDliha 588 (666)
..|||+|||+|+|+.+|++.+ .+|+.+|. +.+++.+.++ |+ +.+++.-++.+.. . +.+||+|.+
T Consensus 211 ~~VLDlg~G~G~~~~~la~~~-----~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALGF-----REVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHHE-----EEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEeeeccCHHHHHHHHhC-----CEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEE
Confidence 569999999999999999873 25666663 4566655543 54 4444443333221 1 468999998
Q ss_pred ccccccCCCC------CCHHHHHHHhhhcccCCeEEEEEeCh------hHHHHHHHHHHhcCcEEEEE
Q 005981 589 AGLFSVESKR------CNMSTIMLEMDRMLRPGGHVYIRDSI------DVMDELQEIGKAMGWHVTLR 644 (666)
Q Consensus 589 ~~~f~~~~~~------c~~~~~l~E~dRiLRPgG~~ii~d~~------~~~~~~~~i~~~l~W~~~~~ 644 (666)
+--....... -....++.++-|+|+|||++++.... ...+.+++.+...+.+..+.
T Consensus 286 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i 353 (382)
T 1wxx_A 286 DPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVV 353 (382)
T ss_dssp CCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 6322111111 12357899999999999999997432 23555666666676555443
No 499
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.76 E-value=1.2e-05 Score=87.19 Aligned_cols=119 Identities=18% Similarity=0.158 Sum_probs=74.3
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHhc----cc----cccccccCCCCCC-C---CCccceE
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYDR----GL----IGVMHDWCEPFDT-Y---PRTYDLL 586 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~er----Gl----ig~~~~~ce~~~~-y---p~tyDli 586 (666)
..|||+|||+|+|+.+|++.|+ -.|+.+|. +.+++.+.++ |+ +.+++..++.+.. + ...||+|
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g~----~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGGC----SQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTTC----SEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEeeccCCHHHHHHHHCCC----CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 3699999999999999999863 14555653 4555555443 43 2233333222211 1 3689999
Q ss_pred Eecccccc------CCCCCCHHHHHHHhhhcccCCeEEEEEeCh------hHHHHHHHHHHhcCcEEE
Q 005981 587 HAAGLFSV------ESKRCNMSTIMLEMDRMLRPGGHVYIRDSI------DVMDELQEIGKAMGWHVT 642 (666)
Q Consensus 587 ha~~~f~~------~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~------~~~~~~~~i~~~l~W~~~ 642 (666)
.++--+.. ......+..++.++-++|+|||+++++... +..+.+++.+...+++..
T Consensus 298 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 365 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQ 365 (396)
T ss_dssp EECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEE
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEE
Confidence 98732211 011134578999999999999999997432 335556666666664443
No 500
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=97.75 E-value=4.2e-05 Score=76.92 Aligned_cols=129 Identities=16% Similarity=0.216 Sum_probs=88.3
Q ss_pred eeEeeccccchHHHHHHhhCCCceEEEEeeccCC-CCChhHHHh----ccc---cccc-cccCCCCCCCCC-ccceEEec
Q 005981 520 RNVLDMRAGFGGFAAALIEQKFDCWVMNVVPVSG-FNTLPVIYD----RGL---IGVM-HDWCEPFDTYPR-TYDLLHAA 589 (666)
Q Consensus 520 RnvlD~g~G~Ggfaa~L~~~~~~vwvmnv~~~~~-~~~l~~~~e----rGl---ig~~-~~~ce~~~~yp~-tyDliha~ 589 (666)
..|+|+|||+|.++.+|++.+- .-.|+.+|- +..++.|.+ .|+ |.+. .|+.+.++. . .||+|-..
T Consensus 17 ~~VlDIGtGsG~l~i~la~~~~---~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~--~~~~D~Ivia 91 (225)
T 3kr9_A 17 AILLDVGSDHAYLPIELVERGQ---IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE--TDQVSVITIA 91 (225)
T ss_dssp EEEEEETCSTTHHHHHHHHTTS---EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG--GGCCCEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHhCC---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc--CcCCCEEEEc
Confidence 3599999999999999999852 124556663 455555544 465 3344 344343331 3 69988865
Q ss_pred cccccCCCCCCHHHHHHHhhhcccCCeEEEEEeChhHHHHHHHHHHhcCcEEEEEe--ccCCCCCceEEEEEEe
Q 005981 590 GLFSVESKRCNMSTIMLEMDRMLRPGGHVYIRDSIDVMDELQEIGKAMGWHVTLRE--TAEGPHASYRILTADK 661 (666)
Q Consensus 590 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~ii~d~~~~~~~~~~i~~~l~W~~~~~~--~~~~~~~~e~~l~~~k 661 (666)
++ + ...+..+|.+..+.|+|+|++|++-. .-...+++.+...+|.+.... .|++ .-..||++.+
T Consensus 92 G~----G-g~~i~~Il~~~~~~L~~~~~lVlq~~-~~~~~vr~~L~~~Gf~i~~e~lv~e~~--~~Yeii~~~~ 157 (225)
T 3kr9_A 92 GM----G-GRLIARILEEGLGKLANVERLILQPN-NREDDLRIWLQDHGFQIVAESILEEAG--KFYEILVVEA 157 (225)
T ss_dssp EE----C-HHHHHHHHHHTGGGCTTCCEEEEEES-SCHHHHHHHHHHTTEEEEEEEEEEETT--EEEEEEEEEE
T ss_pred CC----C-hHHHHHHHHHHHHHhCCCCEEEEECC-CCHHHHHHHHHHCCCEEEEEEEEEECC--EEEEEEEEEe
Confidence 32 1 23467899999999999999999766 568889999999999987654 2332 2355777665
Done!