BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>005985
MALCGIGLSQTLEGIDKWCLGGNFSTRLMVHRHFNWKTSARAQRRSSAIQCSSSRKVVSE
ESVQNEASVSVDDESDSGHVIRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHN
TKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQVHGYVSSHTTSGRSLFTLVH
GYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLL
IGVNYLHSHGLAHTELRLENVHISPVDRHIKVRILGNAADFYEDGPNNSSPDSNMDRRQM
MIAFDMRCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNT
GFQILDRNWGAGWNLLSLLLATKPSKRISCLDALRHPFLCGPRWRVDPSIDMIRWGLGSS
AVRITEEYIYRQPQRARLAYFVELMEMLNPHSKPKNWLEFLPGKWRMLYCTGRHIGLTLR
QPPARILVGYVRLTVTRPSKSNTNLSFTSDISFTVMTGREWPHDKTGITGKLQINSLFRL
MAGRRLYIKEEKTTPGLFSSQSDAQNSLVQKLSGRKWRKAVPFKDIPSSLSVAKLVSGDI
ELTMSLGHPLNHNVDAAKNIVQEVRTQIPPEMFDLSKFVCGTYVDSRFLVLRGVNGSALL
FTRSWS

High Scoring Gene Products

Symbol, full name Information P value
ORG1
AT5G53450
protein from Arabidopsis thaliana 7.4e-224
STN7
STT7 homolog STN7
protein from Arabidopsis thaliana 0.00035

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  005985
        (666 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2178456 - symbol:ORG1 "OBP3-responsive gene 1"...  2161  7.4e-224  1
TAIR|locus:2205465 - symbol:STN7 "STT7 homolog STN7" spec...   100  0.00035   2


>TAIR|locus:2178456 [details] [associations]
            symbol:ORG1 "OBP3-responsive gene 1" species:3702
            "Arabidopsis thaliana" [GO:0004672 "protein kinase activity"
            evidence=IEA] [GO:0005198 "structural molecule activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006468
            "protein phosphorylation" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=IEA] [GO:0016301 "kinase activity" evidence=ISS]
            [GO:0016772 "transferase activity, transferring
            phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
            InterPro:IPR006843 InterPro:IPR011009 Pfam:PF00069 Pfam:PF04755
            PROSITE:PS50011 GO:GO:0005524 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0005198
            SUPFAM:SSF56112 GO:GO:0004672 EMBL:AB020754 EMBL:BT002001
            EMBL:BT008410 IPI:IPI00543580 RefSeq:NP_851182.1 UniGene:At.28565
            ProteinModelPortal:Q9LV04 STRING:Q9LV04 PRIDE:Q9LV04
            EnsemblPlants:AT5G53450.1 GeneID:835426 KEGG:ath:AT5G53450
            TAIR:At5g53450 HOGENOM:HOG000006303 InParanoid:Q9LV04 OMA:DMRCVGF
            PhylomeDB:Q9LV04 ProtClustDB:CLSN2680528 Genevestigator:Q9LV04
            Uniprot:Q9LV04
        Length = 670

 Score = 2161 (765.8 bits), Expect = 7.4e-224, P = 7.4e-224
 Identities = 426/668 (63%), Positives = 503/668 (75%)

Query:     1 MALCGIGLSQTLEGIDKWCLGGNFSTRLMVHRHFNWKTSARAQRRSSAI-QCXXXXXXXX 59
             MALCG+  +  L  +  +    N S       H  W+  + + R  S I  C        
Sbjct:     1 MALCGVCSTPNLPNLQVFRSVRNSSIGYK-RNHSLWQLRSSSFRAKSVIFHCSSSLRQSP 59

Query:    60 XXXXQNEAXXXXXXXXXXGHVIRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLH 119
                 + +            HV++F   DF+ILDRVSIG  GRADE+VFEAIV+  +SPL 
Sbjct:    60 SNVEEIDDNPSVSLEDESAHVMQFKWSDFRILDRVSIGHGGRADELVFEAIVQVPDSPLF 119

Query:   120 NTKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQVHGYVSSHTTSGRSLFTLV 179
             N  VVLR+L + +AQRRGRRAIEV KKLVRRRL+YHSYSMQVHGY++++ +  +  FTLV
Sbjct:   120 NQGVVLRKLNTTRAQRRGRRAIEVFKKLVRRRLLYHSYSMQVHGYITNNLSDDQYSFTLV 179

Query:   180 HGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASXXXXXXXXXXXXX 239
             HG HGSFS+RHWLQQ+DW+PTLEATLALDEES R+VGDD+ GGPA S             
Sbjct:   180 HGCHGSFSIRHWLQQSDWIPTLEATLALDEESFRRVGDDTTGGPAVSRQLRLIRTLMRDI 239

Query:   240 XIGVNYLHSHGLAHTELRLENVHISPVDRHIKVRILGNAADFYEDGPNNSSPDSNMDRRQ 299
              IGVNYLHSHGLAHTELRLENVHISPVDRHIKV ILGNAADF  D P+ S+  S MDRRQ
Sbjct:   240 LIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFNGDVPSTSNAYSTMDRRQ 299

Query:   300 MMIAFDMRCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGN 359
             MMIAFDMRCVGFMMAKMVL+ELMDPLIF K KSFL KG DPS LREF +  LN NS SGN
Sbjct:   300 MMIAFDMRCVGFMMAKMVLQELMDPLIFAKLKSFLAKGNDPSSLREFFVTTLNTNSESGN 359

Query:   360 TGFQILDRNWGAGWNLLSLLLATKPSKRISCLDALRHPFLCGPRWRVDPSIDMIRWGLGS 419
             TG QILDRNWGAGW+LLSLL+AT+PS+RISCLDAL+HPFLCGPRWRV PS+D+IRWGLGS
Sbjct:   360 TGVQILDRNWGAGWHLLSLLIATRPSERISCLDALKHPFLCGPRWRVAPSMDIIRWGLGS 419

Query:   420 SAVRITEEYIYRQPQRARLAYFVELMEMLNPHSKPKNWLEFLPGKWRMLYCTGRHIGLTL 479
             +AV+I+EEYIYR PQR RLA+F+ LMEMLNP+ KP  WLE LPG+WR+LY TG+HIGLTL
Sbjct:   420 TAVKISEEYIYRMPQRQRLAHFIGLMEMLNPYPKPNCWLELLPGRWRLLYSTGKHIGLTL 479

Query:   480 RQPPARILVGYVRLTVTRPSKS--NTNLSFTSDISFTVMTGREWPHDKTGITGKLQINSL 537
             RQP  R L+G V LT+TR S+S  NT+LSFTSDI FT +T ++WPH+K G  GKLQ  S 
Sbjct:   480 RQPSTRALIGNVHLTITRASESINNTSLSFTSDIRFTAITSKDWPHNKIGAAGKLQTLSQ 539

Query:   538 FRLMAGRRLYIKEEKTTPGLFS-SQSDAQNSLVQKLSGRKWRKAVPFKDIPSSLSVAKLV 596
             FRL+AG+RLY+KEEK   G FS  + DA+  L +KL   KW+K VPFK+ PSSL VAKLV
Sbjct:   540 FRLIAGKRLYLKEEKKNIGKFSMGEPDAEEGLAEKLETEKWKKVVPFKEFPSSLPVAKLV 599

Query:   597 SGDIELTMSLGHPLNHNVDAAKNIVQEVRTQIPPEMFDLSKFVCGTYVDSRFLVLRGVNG 656
             SG+IE+TM++    N ++D+  +++ EVR QIPPEMFDLSK VCGTY+DSR LVLR VNG
Sbjct:   600 SGEIEVTMNM----NDHIDSPGSVIGEVRKQIPPEMFDLSKLVCGTYIDSRLLVLRCVNG 655

Query:   657 SALLFTRS 664
             SALLFTRS
Sbjct:   656 SALLFTRS 663


>TAIR|locus:2205465 [details] [associations]
            symbol:STN7 "STT7 homolog STN7" species:3702 "Arabidopsis
            thaliana" [GO:0004672 "protein kinase activity" evidence=IEA;IDA]
            [GO:0004674 "protein serine/threonine kinase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006468
            "protein phosphorylation" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0016301 "kinase activity" evidence=ISS]
            [GO:0016772 "transferase activity, transferring
            phosphorus-containing groups" evidence=IEA] [GO:0042548 "regulation
            of photosynthesis, light reaction" evidence=IMP] [GO:0007623
            "circadian rhythm" evidence=IEP] [GO:0015996 "chlorophyll catabolic
            process" evidence=RCA] InterPro:IPR000719 InterPro:IPR008271
            InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
            PROSITE:PS00108 PROSITE:PS50011 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0009507 GO:GO:0007623
            SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0004672 EMBL:AC011914
            GO:GO:0009535 EMBL:AC011665 HOGENOM:HOG000029907 EMBL:BT030352
            EMBL:AK221920 IPI:IPI00541206 PIR:A96713 RefSeq:NP_564946.1
            UniGene:At.27657 ProteinModelPortal:Q9S713 SMR:Q9S713 STRING:Q9S713
            PaxDb:Q9S713 PRIDE:Q9S713 EnsemblPlants:AT1G68830.1 GeneID:843215
            KEGG:ath:AT1G68830 GeneFarm:4716 TAIR:At1g68830 eggNOG:NOG312083
            InParanoid:Q9S713 OMA:LQMAFPS PhylomeDB:Q9S713 ProtClustDB:PLN03225
            Genevestigator:Q9S713 GermOnline:AT1G68830 GO:GO:0042548
            Uniprot:Q9S713
        Length = 562

 Score = 100 (40.3 bits), Expect = 0.00035, Sum P(2) = 0.00035
 Identities = 28/96 (29%), Positives = 46/96 (47%)

Query:   304 FDMRCVGFMMAKMVLRELMDPLIFTKFKSFLTK-GIDPSCLREFLLQVLNRNSSSGNTGF 362
             FD+  +G +  +M    L       +F   L +   D +  R+    V  R S+    GF
Sbjct:   359 FDIYSIGLIFLQMAFPSLRSDSNLIQFNRQLKRCDYDLTAWRKL---VEPRASADLRRGF 415

Query:   363 QILDRNWGAGWNLLSLLLATKPSKRISCLDALRHPF 398
             +++D + G GW LL+ ++  K  +RIS   AL HP+
Sbjct:   416 ELVDLDGGIGWELLTSMVRYKARQRISAKAALAHPY 451

 Score = 70 (29.7 bits), Expect = 0.00035, Sum P(2) = 0.00035
 Identities = 35/141 (24%), Positives = 59/141 (41%)

Query:   140 AIEVLKKLVRRRLMYHSYSMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLP 199
             A+E+      RR   +S +  V+G++   +  G   + L+  Y G  +L   +Q  ++  
Sbjct:   174 AVEIWMNERVRRACGNSCADFVYGFLDKSSKKGPE-YWLLWKYEGESTLAGLMQSKEFPY 232

Query:   200 TLEATLALDEESVRKVGDDSIGGPAASXXXXXXXXXXXXXXIGVNYLHSHGLAHTELRLE 259
              +E T+ L      KV D   G    +               G   LHS G+ H +++ +
Sbjct:   233 NVE-TIILG-----KVQDLPKGLERENKIIQTIMRQLLFALDG---LHSTGIIHRDVKPQ 283

Query:   260 NVHISPVDRHIKVRILGNAAD 280
             N+  S   R  K+  LG AAD
Sbjct:   284 NIIFSEGSRSFKIIDLGAAAD 304


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.136   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      666       630   0.00091  120 3  11 22  0.49    33
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  626 (67 KB)
  Total size of DFA:  348 KB (2173 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  51.27u 0.09s 51.36t   Elapsed:  00:00:03
  Total cpu time:  51.28u 0.09s 51.37t   Elapsed:  00:00:03
  Start:  Sat May 11 02:03:13 2013   End:  Sat May 11 02:03:16 2013

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