Query         005986
Match_columns 666
No_of_seqs    628 out of 3235
Neff          7.3 
Searched_HMMs 13730
Date          Mon Mar 25 12:55:09 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005986.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/005986hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2j4za1 d.144.1.7 (A:126-388)  100.0   2E-55 1.5E-59  452.5  24.2  247   82-401     2-260 (263)
  2 d1nvra_ d.144.1.7 (A:) Cell cy 100.0 1.1E-55 8.3E-60  456.3  21.3  249   85-402     4-266 (271)
  3 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0 1.9E-54 1.4E-58  450.9  22.7  252   85-409     7-280 (288)
  4 d1yhwa1 d.144.1.7 (A:249-541)  100.0 4.6E-54 3.4E-58  449.1  24.4  246   86-402    20-276 (293)
  5 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0   9E-54 6.6E-58  455.3  27.0  250   83-405     2-270 (337)
  6 d1a06a_ d.144.1.7 (A:) Calmodu 100.0 3.1E-53 2.2E-57  445.7  25.7  250   86-403     9-271 (307)
  7 d1omwa3 d.144.1.7 (A:186-549)  100.0 4.2E-53 3.1E-57  454.9  27.3  257   83-405     1-274 (364)
  8 d2jfla1 d.144.1.7 (A:21-308) S 100.0 1.4E-53   1E-57  444.5  22.3  249   86-402    12-275 (288)
  9 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0 4.2E-54 3.1E-58  455.2  18.5  266   83-404     3-306 (322)
 10 d1t4ha_ d.144.1.7 (A:) Protein 100.0 8.6E-53 6.2E-57  434.4  27.5  247   88-400    11-270 (270)
 11 d1koaa2 d.144.1.7 (A:5915-6264 100.0 6.1E-53 4.5E-57  451.2  26.7  257   84-407    24-291 (350)
 12 d1jksa_ d.144.1.7 (A:) Death-a 100.0 4.2E-53 3.1E-57  441.5  24.2  252   86-406    10-281 (293)
 13 d2java1 d.144.1.7 (A:3-271) Se 100.0 2.7E-53   2E-57  437.9  22.4  249   85-399     3-269 (269)
 14 d1fota_ d.144.1.7 (A:) cAMP-de 100.0 6.2E-53 4.5E-57  445.1  25.4  250   83-405     1-266 (316)
 15 d1koba_ d.144.1.7 (A:) Twitchi 100.0 7.8E-53 5.7E-57  450.8  25.8  252   85-403    28-290 (352)
 16 d1ua2a_ d.144.1.7 (A:) Cell di 100.0 2.1E-52 1.5E-56  437.0  25.2  255   90-406     2-290 (299)
 17 d1phka_ d.144.1.7 (A:) gamma-s 100.0 3.8E-52 2.8E-56  431.1  26.6  250   85-401     2-275 (277)
 18 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0 2.7E-52   2E-56  446.3  24.6  248   84-404    39-302 (350)
 19 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0 3.2E-52 2.3E-56  438.3  23.7  247   87-403    16-274 (309)
 20 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0 2.3E-51 1.7E-55  429.2  28.0  272   85-405     1-292 (298)
 21 d1xjda_ d.144.1.7 (A:) Protein 100.0 1.1E-51 7.8E-56  436.4  25.5  247   85-404     1-263 (320)
 22 d1tkia_ d.144.1.7 (A:) Titin,  100.0 5.1E-52 3.8E-56  439.0  21.3  251   85-402     4-264 (321)
 23 d2ozaa1 d.144.1.7 (A:51-385) M 100.0 2.4E-51 1.7E-55  436.4  21.4  259   84-403     9-279 (335)
 24 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0 8.2E-51   6E-55  422.0  24.4  266   85-401     1-286 (286)
 25 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0 1.1E-50 8.1E-55  429.2  25.3  268   85-404    34-327 (328)
 26 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0 2.4E-51 1.8E-55  423.9  19.5  243   86-403     4-262 (273)
 27 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0 3.1E-50 2.3E-54  421.0  25.4  266   85-403     6-300 (305)
 28 d1unla_ d.144.1.7 (A:) Cyclin- 100.0 1.1E-49 8.2E-54  413.4  26.7  258   85-403     1-290 (292)
 29 d1opja_ d.144.1.7 (A:) Abelson 100.0 1.6E-49 1.2E-53  413.3  24.5  247   80-395    11-268 (287)
 30 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0 1.4E-49   1E-53  424.0  23.9  272   85-403    17-308 (346)
 31 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0   1E-49 7.4E-54  426.1  22.6  274   87-403    21-310 (350)
 32 d3blha1 d.144.1.7 (A:8-325) Ce 100.0 3.7E-49 2.7E-53  415.5  25.2  262   85-403     9-312 (318)
 33 d1pmea_ d.144.1.7 (A:) MAP kin 100.0 1.4E-48 9.9E-53  416.5  26.3  271   86-403     8-302 (345)
 34 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0 3.7E-49 2.7E-53  417.2  21.4  259   82-404    20-300 (322)
 35 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0 2.4E-48 1.8E-52  399.2  24.8  241   84-396     3-255 (263)
 36 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0 1.1E-48 8.4E-53  413.8  22.3  272   81-396    32-320 (325)
 37 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0 1.8E-48 1.3E-52  415.0  23.7  273   85-403    17-308 (348)
 38 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0 1.3E-48 9.5E-53  404.3  21.3  247   81-396     3-266 (276)
 39 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0 1.1E-48 7.7E-53  404.0  19.5  248   81-400     8-269 (272)
 40 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0 3.5E-48 2.5E-52  405.6  22.8  247   82-396    22-286 (299)
 41 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0 4.6E-48 3.4E-52  399.7  19.7  250   85-399     6-272 (277)
 42 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0 8.1E-48 5.9E-52  400.1  21.3  248   83-400     5-272 (285)
 43 d1fmka3 d.144.1.7 (A:249-533)  100.0 1.4E-47   1E-51  398.3  23.0  259   79-408    10-281 (285)
 44 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0 8.1E-48 5.9E-52  398.5  20.0  238   92-400    13-270 (277)
 45 d1ywna1 d.144.1.7 (A:818-1166) 100.0 3.5E-47 2.5E-51  397.2  24.4  267   82-396     9-290 (299)
 46 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0 9.5E-48 6.9E-52  393.9  19.6  241   84-396     2-254 (258)
 47 d1mp8a_ d.144.1.7 (A:) Focal a 100.0 3.6E-47 2.6E-51  392.3  22.1  246   82-396     3-262 (273)
 48 d2b1pa1 d.144.1.7 (A:46-400) c 100.0 5.8E-47 4.3E-51  405.3  23.3  270   85-403    16-318 (355)
 49 d1mqba_ d.144.1.7 (A:) epha2 r 100.0 3.2E-46 2.3E-50  387.4  25.6  248   82-395     3-265 (283)
 50 d1byga_ d.144.1.7 (A:) Carboxy 100.0 4.5E-47 3.2E-51  389.8  18.7  245   81-396     2-253 (262)
 51 d1xkka_ d.144.1.7 (A:) EGF rec 100.0 6.8E-46 4.9E-50  391.1  24.3  245   84-396     7-266 (317)
 52 d1lufa_ d.144.1.7 (A:) Musk ty 100.0   5E-46 3.7E-50  389.2  22.2  271   82-395     9-294 (301)
 53 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0 2.1E-45 1.5E-49  386.3  26.8  269   80-395    17-300 (311)
 54 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0 1.6E-45 1.2E-49  385.1  24.6  265   81-395     8-289 (299)
 55 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0 3.4E-46 2.5E-50  392.0  18.3  262   80-396     4-279 (309)
 56 d1u46a_ d.144.1.7 (A:) Activat 100.0 1.8E-45 1.3E-49  380.0  19.9  245   83-395     5-267 (273)
 57 d1p4oa_ d.144.1.7 (A:) Insulin 100.0 9.3E-45 6.8E-49  380.9  19.9  264   81-401    15-299 (308)
 58 d1ckia_ d.144.1.7 (A:) Casein  100.0 1.7E-43 1.3E-47  368.9  22.9  252   86-400     7-279 (299)
 59 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0 2.3E-43 1.7E-47  370.8  23.1  242   89-396    30-287 (311)
 60 d1vjya_ d.144.1.7 (A:) Type I  100.0 7.4E-44 5.4E-48  373.2  18.7  258   86-396     3-291 (303)
 61 d1q8ya_ d.144.1.7 (A:) Sky1p { 100.0 4.2E-43   3E-47  374.7  20.0  280   84-403    11-335 (362)
 62 d1csna_ d.144.1.7 (A:) Casein  100.0 3.4E-42 2.5E-46  358.6  24.5  248   85-395     4-271 (293)
 63 d1zara2 d.144.1.9 (A:91-281) R  99.9 2.6E-24 1.9E-28  208.4  10.3  162   88-312     2-188 (191)
 64 d1j7la_ d.144.1.6 (A:) Type II  98.3   2E-06 1.4E-10   84.4  12.0   87   85-192    13-101 (263)
 65 d1nd4a_ d.144.1.6 (A:) Aminogl  97.8 2.9E-05 2.1E-09   75.3   9.7   78   93-189    17-94  (255)
 66 d2pula1 d.144.1.6 (A:5-396) Me  97.7   6E-05 4.4E-09   78.8  11.2   79   91-188    31-118 (392)
 67 d1nw1a_ d.144.1.8 (A:) Choline  97.0  0.0012 8.8E-08   68.4  11.5   86   84-188    41-128 (395)
 68 d1zyla1 d.144.1.6 (A:4-328) Rd  96.8 0.00098 7.1E-08   67.3   8.3   70  105-186    37-109 (325)
 69 d2ppqa1 d.144.1.6 (A:5-320) Ho  96.6  0.0022 1.6E-07   63.9   9.2   56   83-149    15-70  (316)
 70 d1ci0a_ b.45.1.1 (A:) Pyridoxi  26.3      20  0.0014   32.2   3.4   50  613-662    12-66  (205)
 71 d1e7ua4 d.144.1.4 (A:726-1094)  23.4      49  0.0036   32.2   6.1   45  232-279   200-244 (369)

No 1  
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2e-55  Score=452.49  Aligned_cols=247  Identities=20%  Similarity=0.270  Sum_probs=210.5

Q ss_pred             ccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh-----hHHHHHHHHHHHHHhhhccCCCCC
Q 005986           82 RFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-----AQRRGRRAIEVLKKLVRRRLMYHS  156 (666)
Q Consensus        82 ~~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~-----~~~~~~rEi~iL~~L~~~~~~~Hp  156 (666)
                      +|.+++|++++.||+|+||    +||+|+++.     +++.||+|++.+..     ..+.+.+|+++|+.++      ||
T Consensus         2 ~~~l~dy~i~~~iG~G~fg----~Vy~~~~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~------hp   66 (263)
T d2j4za1           2 QWALEDFEIGRPLGKGKFG----NVYLAREKQ-----SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------HP   66 (263)
T ss_dssp             CCCGGGEEEEEEEEECSSE----EEEEEEETT-----TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC------CT
T ss_pred             CcchhHeEEEEEEecCCCc----EEEEEEECC-----CCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcC------CC
Confidence            4678999999999999999    999999998     89999999997532     2355689999999997      99


Q ss_pred             cceEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHH
Q 005986          157 YSMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLM  236 (666)
Q Consensus       157 nIVkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~  236 (666)
                      |||++++++.     +++.+|||||||++|+|.+++.+.+         .++|                    ..++.|+
T Consensus        67 nIv~~~~~~~-----~~~~~~ivmEy~~~g~L~~~l~~~~---------~l~e--------------------~~~~~i~  112 (263)
T d2j4za1          67 NILRLYGYFH-----DATRVYLILEYAPLGTVYRELQKLS---------KFDE--------------------QRTATYI  112 (263)
T ss_dssp             TBCCEEEEEE-----CSSEEEEEEECCTTCBHHHHHHHHS---------SCCH--------------------HHHHHHH
T ss_pred             CCCeEEEEEE-----ECCEEEEEEeecCCCcHHHHHhhcC---------CCCH--------------------HHHHHHH
Confidence            9999999999     7889999999999999999998754         3554                    4578899


Q ss_pred             HHHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCCC-------CCCCCccccccccCCCchhhhhhH
Q 005986          237 RDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG-------PNNSSPDSNMDRRQMMIAFDMRCV  309 (666)
Q Consensus       237 ~QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~~-------~~y~APEvl~~~~~ys~~sDIWSL  309 (666)
                      .||+.||+|||++|||||||||+|||++. ++.+||+|||+|+......       +.|+|||++.+ ..|+.++|||||
T Consensus       113 ~qi~~al~~lH~~~ivHrDiKp~Nill~~-~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~~~~~DiwSl  190 (263)
T d2j4za1         113 TELANALSYCHSKRVIHRDIKPENLLLGS-AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSL  190 (263)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCCGGGEEECT-TSCEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTT-CCCCTTHHHHHH
T ss_pred             HHHHHHHHHHHHCCeeeeeeccccceecC-CCCEeecccceeeecCCCcccccCCCCcccCHHHHcC-CCCCchhhhhhH
Confidence            99999999999999999999999999998 8999999999998765443       78999996654 568999999999


Q ss_pred             HHHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCC
Q 005986          310 GFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRIS  389 (666)
Q Consensus       310 GviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpT  389 (666)
                      ||++|||++|++||..            .+...+..   .+....       ...+..+++++++||.+||++||++|||
T Consensus       191 Gvilyell~G~~Pf~~------------~~~~~~~~---~i~~~~-------~~~p~~~s~~~~~li~~~L~~dp~~R~t  248 (263)
T d2j4za1         191 GVLCYEFLVGKPPFEA------------NTYQETYK---RISRVE-------FTFPDFVTEGARDLISRLLKHNPSQRPM  248 (263)
T ss_dssp             HHHHHHHHHSSCTTCC------------SSHHHHHH---HHHTTC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hHHHHHHhcCCCCCCC------------CCHHHHHH---HHHcCC-------CCCCccCCHHHHHHHHHHccCCHhHCcC
Confidence            9999999999999852            33333222   222221       2334568899999999999999999999


Q ss_pred             HHHHhcCCCCCC
Q 005986          390 CLDALRHPFLCG  401 (666)
Q Consensus       390 a~elL~HP~f~~  401 (666)
                      ++|+|+||||+.
T Consensus       249 ~~eil~hp~~~~  260 (263)
T d2j4za1         249 LREVLEHPWITA  260 (263)
T ss_dssp             HHHHHTCHHHHH
T ss_pred             HHHHHcCcCcCC
Confidence            999999999964


No 2  
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-55  Score=456.30  Aligned_cols=249  Identities=19%  Similarity=0.215  Sum_probs=205.1

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh---hHHHHHHHHHHHHHhhhccCCCCCcceEE
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ---AQRRGRRAIEVLKKLVRRRLMYHSYSMQV  161 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~---~~~~~~rEi~iL~~L~~~~~~~HpnIVkl  161 (666)
                      +++|++++.||+|+||    +||+|+++.     +++.||||++....   ..+.+.+|+++|++++      |||||++
T Consensus         4 ~~dy~~~~~lG~G~fg----~V~~~~~~~-----~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~------HpnIv~~   68 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYG----EVQLAVNRV-----TEEAVAVKIVDMKRAVDCPENIKKEICINKMLN------HENVVKF   68 (271)
T ss_dssp             TTEEEEEEEEEEETTE----EEEEEEETT-----TCCEEEEEEEECC-------CHHHHHHHHHTCC------CTTBCCE
T ss_pred             CcceEEEEEEecCcCe----EEEEEEECC-----CCCEEEEEEEehhhcchHHHHHHHHHHHHHhCC------CCCEeeE
Confidence            5789999999999999    999999998     89999999997532   2345689999999997      9999999


Q ss_pred             EEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHH
Q 005986          162 HGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLI  241 (666)
Q Consensus       162 ~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~  241 (666)
                      ++++.     +++.+|||||||++|+|.+++.+.+         .++|                    ..++.++.||+.
T Consensus        69 ~~~~~-----~~~~~~ivmEy~~gg~L~~~l~~~~---------~l~e--------------------~~~~~i~~qi~~  114 (271)
T d1nvra_          69 YGHRR-----EGNIQYLFLEYCSGGELFDRIEPDI---------GMPE--------------------PDAQRFFHQLMA  114 (271)
T ss_dssp             EEEEE-----ETTEEEEEEECCTTEEGGGGSBTTT---------BCCH--------------------HHHHHHHHHHHH
T ss_pred             eeeec-----cCceeEEEEeccCCCcHHHHHhcCC---------CCCH--------------------HHHHHHHHHHHH
Confidence            99999     7789999999999999999997653         3554                    457889999999


Q ss_pred             HHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccC-----------CCCCCCCccccccccCCCchhhhhhHH
Q 005986          242 GVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE-----------DGPNNSSPDSNMDRRQMMIAFDMRCVG  310 (666)
Q Consensus       242 aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~-----------~~~~y~APEvl~~~~~ys~~sDIWSLG  310 (666)
                      ||+|||++||+||||||+|||++. ++.+||+|||+|+....           +.+.|||||++.+...++.++||||||
T Consensus       115 al~ylH~~~IiHrDiKp~NILl~~-~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlG  193 (271)
T d1nvra_         115 GVVYLHGIGITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG  193 (271)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEECT-TCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHH
T ss_pred             HHHHHHHcCCccCcccHHHEEECC-CCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhH
Confidence            999999999999999999999998 89999999999986532           237899999877666668899999999


Q ss_pred             HHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCCH
Q 005986          311 FMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISC  390 (666)
Q Consensus       311 viLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpTa  390 (666)
                      |++|||++|++||....          ........    .....     .....+..+++++++||.+||+.||++|||+
T Consensus       194 vilyeml~G~~pf~~~~----------~~~~~~~~----~~~~~-----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~  254 (271)
T d1nvra_         194 IVLTAMLAGELPWDQPS----------DSCQEYSD----WKEKK-----TYLNPWKKIDSAPLALLHKILVENPSARITI  254 (271)
T ss_dssp             HHHHHHHHSSCSCSSSS----------TTSHHHHH----HHTTC-----TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             HHHHHHHhCCCCCCCCC----------hHHHHHHH----HhcCC-----CCCCccccCCHHHHHHHHHHcCCChhHCcCH
Confidence            99999999999985311          11111111    11111     1123345688999999999999999999999


Q ss_pred             HHHhcCCCCCCC
Q 005986          391 LDALRHPFLCGP  402 (666)
Q Consensus       391 ~elL~HP~f~~~  402 (666)
                      +|+|+||||+..
T Consensus       255 ~eil~hpwf~~~  266 (271)
T d1nvra_         255 PDIKKDRWYNKP  266 (271)
T ss_dssp             HHHTTCTTTTCC
T ss_pred             HHHhcCHhhCcC
Confidence            999999999763


No 3  
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.9e-54  Score=450.88  Aligned_cols=252  Identities=17%  Similarity=0.275  Sum_probs=212.4

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh-----hHHHHHHHHHHHHHhhhccCCCCCcce
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-----AQRRGRRAIEVLKKLVRRRLMYHSYSM  159 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~-----~~~~~~rEi~iL~~L~~~~~~~HpnIV  159 (666)
                      .++|++++.||+|+||    +||+|+++.     +++.||||++.+..     ..+.+.+|+++|++++      |||||
T Consensus         7 p~dy~i~~~lG~G~fg----~Vy~a~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~------HpnIv   71 (288)
T d1uu3a_           7 PEDFKFGKILGEGSFS----TVVLARELA-----TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD------HPFFV   71 (288)
T ss_dssp             GGGEEEEEEEEECSSC----EEEEEEETT-----TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC------STTBC
T ss_pred             CCCCEEEEEEeeCCCe----EEEEEEECC-----CCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcC------CCCee
Confidence            3689999999999999    999999998     89999999997532     2345789999999997      99999


Q ss_pred             EEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHH
Q 005986          160 QVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDL  239 (666)
Q Consensus       160 kl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QI  239 (666)
                      ++++++.     +.+.+|||||||++|+|.+++...+         .++|                    ..++.++.||
T Consensus        72 ~l~~~~~-----~~~~~~ivmEy~~gg~L~~~~~~~~---------~l~e--------------------~~~~~~~~qi  117 (288)
T d1uu3a_          72 KLYFTFQ-----DDEKLYFGLSYAKNGELLKYIRKIG---------SFDE--------------------TCTRFYTAEI  117 (288)
T ss_dssp             CEEEEEE-----CSSEEEEEECCCTTEEHHHHHHHHS---------SCCH--------------------HHHHHHHHHH
T ss_pred             EEEEEEE-----ECCEEEEEEEccCCCCHHHhhhccC---------CCCH--------------------HHHHHHHHHH
Confidence            9999999     7899999999999999999998764         4554                    4578899999


Q ss_pred             HHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccC-----------CCCCCCCccccccccCCCchhhhhh
Q 005986          240 LIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE-----------DGPNNSSPDSNMDRRQMMIAFDMRC  308 (666)
Q Consensus       240 l~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~-----------~~~~y~APEvl~~~~~ys~~sDIWS  308 (666)
                      +.||+|||++|||||||||+|||++. ++.+||+|||+|+.+..           +.+.|+|||++. ...|+.++||||
T Consensus       118 ~~al~ylH~~~iiHrDiKp~NIll~~-~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~-~~~~~~~~DiwS  195 (288)
T d1uu3a_         118 VSALEYLHGKGIIHRDLKPENILLNE-DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT-EKSACKSSDLWA  195 (288)
T ss_dssp             HHHHHHHHHTTEECSCCSGGGEEECT-TSCEEECCCTTCEECC----------CCCCGGGCCHHHHH-TCCCCHHHHHHH
T ss_pred             HHHHHhhccccEEcCcCCccccccCC-CceEEecccccceecccCCcccccccccCCccccCceeec-cCCCCcccceeh
Confidence            99999999999999999999999998 89999999999986532           337899999665 456999999999


Q ss_pred             HHHHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCC
Q 005986          309 VGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRI  388 (666)
Q Consensus       309 LGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp  388 (666)
                      |||++|||++|++||..            .+...+   +..+....       ...+..+++++++||.+||++||++||
T Consensus       196 lGvilyell~g~~Pf~~------------~~~~~~---~~~i~~~~-------~~~p~~~s~~~~~li~~~L~~dP~~R~  253 (288)
T d1uu3a_         196 LGCIIYQLVAGLPPFRA------------GNEYLI---FQKIIKLE-------YDFPEKFFPKARDLVEKLLVLDATKRL  253 (288)
T ss_dssp             HHHHHHHHHHSSCSSCC------------SSHHHH---HHHHHTTC-------CCCCTTCCHHHHHHHHTTSCSSGGGST
T ss_pred             hhHHHHHHhhCCCCCCC------------cCHHHH---HHHHHcCC-------CCCCccCCHHHHHHHHHHccCCHhHCc
Confidence            99999999999999852            233222   22333221       234457899999999999999999999


Q ss_pred             CHHH------HhcCCCCCCCCCCCCCc
Q 005986          389 SCLD------ALRHPFLCGPRWRVDPS  409 (666)
Q Consensus       389 Ta~e------lL~HP~f~~~~~~~~~~  409 (666)
                      |++|      +++||||++++|.....
T Consensus       254 t~~e~~~~~~i~~Hpff~~i~w~~l~~  280 (288)
T d1uu3a_         254 GCEEMEGYGPLKAHPFFESVTWENLHQ  280 (288)
T ss_dssp             TSGGGTCHHHHHTSGGGTTCCCTTGGG
T ss_pred             CHHHHcCCHHHHcCCccCCCCHHHhhc
Confidence            9988      58999999999865443


No 4  
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.6e-54  Score=449.06  Aligned_cols=246  Identities=20%  Similarity=0.230  Sum_probs=206.1

Q ss_pred             CCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh--hHHHHHHHHHHHHHhhhccCCCCCcceEEEE
Q 005986           86 GDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ--AQRRGRRAIEVLKKLVRRRLMYHSYSMQVHG  163 (666)
Q Consensus        86 ~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~--~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~~  163 (666)
                      ++|++++.||+|+||    +||+|+++.     +|+.||||+++...  ..+.+.+|+++|++++      |||||++++
T Consensus        20 ~~Y~~~~~iG~G~fg----~Vy~a~~~~-----~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~------HpnIv~~~~   84 (293)
T d1yhwa1          20 KKYTRFEKIGQGASG----TVYTAMDVA-----TGQEVAIRQMNLQQQPKKELIINEILVMRENK------NPNIVNYLD   84 (293)
T ss_dssp             TTBCSCEECCCSSSC----EEEEEEBTT-----TCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCC------CTTBCCEEE
T ss_pred             cccEEEEEEecCcCc----EEEEEEECC-----CCCEEEEEEEecccChHHHHHHHHHHHHHhCC------CCCEeeEeE
Confidence            479999999999999    999999988     89999999997532  3456799999999997      999999999


Q ss_pred             EEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHHH
Q 005986          164 YVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIGV  243 (666)
Q Consensus       164 ~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~aL  243 (666)
                      +|.     +.+.+|||||||++|+|.+++.+.          .+++                    ..++.|++||+.||
T Consensus        85 ~~~-----~~~~~~ivmEy~~gg~L~~~~~~~----------~l~~--------------------~~~~~i~~qi~~aL  129 (293)
T d1yhwa1          85 SYL-----VGDELWVVMEYLAGGSLTDVVTET----------CMDE--------------------GQIAAVCRECLQAL  129 (293)
T ss_dssp             EEE-----ETTEEEEEEECCTTCBHHHHHHHS----------CCCH--------------------HHHHHHHHHHHHHH
T ss_pred             EEE-----ECCEEEEEEEecCCCcHHHHhhcc----------CCCH--------------------HHHHHHHHHHHHHH
Confidence            999     778999999999999999988764          3554                    45788999999999


Q ss_pred             HHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC---------CCCCCCccccccccCCCchhhhhhHHHHHH
Q 005986          244 NYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED---------GPNNSSPDSNMDRRQMMIAFDMRCVGFMMA  314 (666)
Q Consensus       244 ~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~---------~~~y~APEvl~~~~~ys~~sDIWSLGviLy  314 (666)
                      +|||++|||||||||+|||++. ++.+||+|||+|+.+...         .+.|+|||++.+ ..|+.++|||||||++|
T Consensus       130 ~yLH~~~iiHrDiKp~NILl~~-~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvily  207 (293)
T d1yhwa1         130 EFLHSNQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAI  207 (293)
T ss_dssp             HHHHHTTEECCCCSGGGEEECT-TCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSS-SCBCTHHHHHHHHHHHH
T ss_pred             HHHHHCCCcccCCcHHHeEECC-CCcEeeccchhheeeccccccccccccCCCccChhhhcC-CCCCchhceehHhHHHH
Confidence            9999999999999999999998 899999999999876432         277999996654 56899999999999999


Q ss_pred             HHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCCHHHHh
Q 005986          315 KMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCLDAL  394 (666)
Q Consensus       315 emltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpTa~elL  394 (666)
                      +|++|++||.+            .+....   +..+.....+    .+..+..+++++++||.+||++||++|||++|+|
T Consensus       208 emltG~~Pf~~------------~~~~~~---~~~~~~~~~~----~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil  268 (293)
T d1yhwa1         208 EMIEGEPPYLN------------ENPLRA---LYLIATNGTP----ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELL  268 (293)
T ss_dssp             HHHHSSCTTTT------------SCHHHH---HHHHHHHCSC----CCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred             HHhhCCCCCCC------------CCHHHH---HHHHHhCCCC----CCCCcccCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            99999999853            222211   1111111111    1234567899999999999999999999999999


Q ss_pred             cCCCCCCC
Q 005986          395 RHPFLCGP  402 (666)
Q Consensus       395 ~HP~f~~~  402 (666)
                      +||||+..
T Consensus       269 ~Hp~~~~~  276 (293)
T d1yhwa1         269 QHQFLKIA  276 (293)
T ss_dssp             TCGGGGGC
T ss_pred             cCHhhCCC
Confidence            99999753


No 5  
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9e-54  Score=455.34  Aligned_cols=250  Identities=21%  Similarity=0.273  Sum_probs=213.4

Q ss_pred             cccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh-----hHHHHHHHHHHHHHhhhccCCCCCc
Q 005986           83 FNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-----AQRRGRRAIEVLKKLVRRRLMYHSY  157 (666)
Q Consensus        83 ~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~-----~~~~~~rEi~iL~~L~~~~~~~Hpn  157 (666)
                      +.+++|++++.||+|+||    +||+|+++.     +++.||||++++..     ..+.+.+|+.+|+.++      |||
T Consensus         2 i~l~dy~~~~~lG~G~fg----~V~~~~~~~-----~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~------hp~   66 (337)
T d1o6la_           2 VTMNDFDYLKLLGKGTFG----KVILVREKA-----TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR------HPF   66 (337)
T ss_dssp             CCGGGEEEEEEEEECSSE----EEEEEEETT-----TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC------CTT
T ss_pred             CchHhcEEEEEEecCcCe----EEEEEEECC-----CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCC------CCC
Confidence            568899999999999999    999999998     89999999997532     2355789999999996      999


Q ss_pred             ceEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHH
Q 005986          158 SMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMR  237 (666)
Q Consensus       158 IVkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~  237 (666)
                      ||+++++|+     +...+|+|||||++|+|.+++.+.+         .++|                    ..++.|++
T Consensus        67 Iv~l~~~~~-----~~~~~~iv~ey~~gg~L~~~~~~~~---------~~~e--------------------~~~~~~~~  112 (337)
T d1o6la_          67 LTALKYAFQ-----THDRLCFVMEYANGGELFFHLSRER---------VFTE--------------------ERARFYGA  112 (337)
T ss_dssp             BCCEEEEEE-----CSSEEEEEEECCTTCBHHHHHHHHS---------CCCH--------------------HHHHHHHH
T ss_pred             EEEEEeeec-----cccccccceeccCCCchhhhhhccc---------CCcH--------------------HHHHHHHH
Confidence            999999999     8899999999999999999998864         4555                    44788999


Q ss_pred             HHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC---------CCCCCCccccccccCCCchhhhhh
Q 005986          238 DLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED---------GPNNSSPDSNMDRRQMMIAFDMRC  308 (666)
Q Consensus       238 QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~---------~~~y~APEvl~~~~~ys~~sDIWS  308 (666)
                      ||+.||+|||++|||||||||+|||++. +|.+||+|||+|+.....         .+.|+|||++. ...|+.++||||
T Consensus       113 qil~al~ylH~~~iiHRDlKP~NILl~~-~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~-~~~y~~~~DiwS  190 (337)
T d1o6la_         113 EIVSALEYLHSRDVVYRDIKLENLMLDK-DGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE-DNDYGRAVDWWG  190 (337)
T ss_dssp             HHHHHHHHHHHTTCBCCCCCGGGEEECT-TSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGS-SSCBCTTHHHHH
T ss_pred             HHhhhhhhhhhcCccccccCHHHeEecC-CCCEEEeecccccccccCCcccccceeCHHHhhhhhcc-CCCCChhhcccc
Confidence            9999999999999999999999999998 899999999999865432         27899999655 456899999999


Q ss_pred             HHHHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCC
Q 005986          309 VGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRI  388 (666)
Q Consensus       309 LGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp  388 (666)
                      |||++|||++|++||.            +.+...+.+.   +....       ...+..+++++++||.+||++||++|+
T Consensus       191 lGvilyeml~G~~pf~------------~~~~~~~~~~---i~~~~-------~~~p~~~s~~~~dli~~~L~~dP~~R~  248 (337)
T d1o6la_         191 LGVVMYEMMCGRLPFY------------NQDHERLFEL---ILMEE-------IRFPRTLSPEAKSLLAGLLKKDPKQRL  248 (337)
T ss_dssp             HHHHHHHHHHSSCSSC------------CSSHHHHHHH---HHHCC-------CCCCTTSCHHHHHHHHHHTCSSTTTST
T ss_pred             hhhHHHHHHHCCCCCC------------CcCHHHHHHH---HhcCC-------CCCCccCCHHHHHHHHhhccCCchhhc
Confidence            9999999999999985            2333333332   32222       234567899999999999999999999


Q ss_pred             C-----HHHHhcCCCCCCCCCC
Q 005986          389 S-----CLDALRHPFLCGPRWR  405 (666)
Q Consensus       389 T-----a~elL~HP~f~~~~~~  405 (666)
                      +     ++|+++||||++++|.
T Consensus       249 ~~~~~~~~eil~Hp~f~~i~~~  270 (337)
T d1o6la_         249 GGGPSDAKEVMEHRFFLSINWQ  270 (337)
T ss_dssp             TCSTTTHHHHHTSGGGTTCCHH
T ss_pred             ccccccHHHHHcCcccccCCHH
Confidence            4     8999999999998753


No 6  
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=3.1e-53  Score=445.75  Aligned_cols=250  Identities=19%  Similarity=0.223  Sum_probs=198.9

Q ss_pred             CCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh---hHHHHHHHHHHHHHhhhccCCCCCcceEEE
Q 005986           86 GDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ---AQRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (666)
Q Consensus        86 ~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~---~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~  162 (666)
                      +.|++++.||+|+||    +||+|+++.     +++.||||++.+..   ....+.+|+.+|++++      |||||+++
T Consensus         9 d~Y~~~~~lG~G~fg----~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~------HpnIv~l~   73 (307)
T d1a06a_           9 DIYDFRDVLGTGAFS----EVILAEDKR-----TQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK------HPNIVALD   73 (307)
T ss_dssp             GTEEEEEESBSGGGG----GEEEEEETT-----TCCEEEEEEEEC----------CHHHHHHHTCC------CTTBCCEE
T ss_pred             cceEEEEEEeeccCe----EEEEEEECC-----CCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCC------CCCCCcEE
Confidence            679999999999999    999999998     89999999997532   2344578999999997      99999999


Q ss_pred             EEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHH
Q 005986          163 GYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIG  242 (666)
Q Consensus       163 ~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~a  242 (666)
                      +++.     +++.+|||||||+||+|.++|.+.+         .++|                    ..++.|+.||+.|
T Consensus        74 ~~~~-----~~~~~~lvmE~~~gg~L~~~l~~~~---------~l~e--------------------~~~~~~~~qi~~a  119 (307)
T d1a06a_          74 DIYE-----SGGHLYLIMQLVSGGELFDRIVEKG---------FYTE--------------------RDASRLIFQVLDA  119 (307)
T ss_dssp             EEEE-----CSSEEEEEECCCCSCBHHHHHHTCS---------CCCH--------------------HHHHHHHHHHHHH
T ss_pred             EEEE-----ECCEEEEEEeccCCCcHHHhhhccc---------CCCH--------------------HHHHHHHHHHHHH
Confidence            9999     7899999999999999999998754         3554                    4578899999999


Q ss_pred             HHHHHhCCCCcCCCCCCceEEcC--CCCceeeecccccccccCC--------CCCCCCccccccccCCCchhhhhhHHHH
Q 005986          243 VNYLHSHGLAHTELRLENVHISP--VDRHIKVGILGNAADFYED--------GPNNSSPDSNMDRRQMMIAFDMRCVGFM  312 (666)
Q Consensus       243 L~yLHs~gIvHRDLKPeNILi~~--~~g~vKL~DFGlA~~~~~~--------~~~y~APEvl~~~~~ys~~sDIWSLGvi  312 (666)
                      |+|||++|||||||||+|||+..  .++.+||+|||+|+.....        .+.|+|||++. ...|+.++|||||||+
T Consensus       120 l~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~-~~~~~~~~DiwSlGvi  198 (307)
T d1a06a_         120 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA-QKPYSKAVDCWSIGVI  198 (307)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------------------CTTSCHHHHT-TCCCCTHHHHHHHHHH
T ss_pred             HHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHc-CCCCCcHHHhhhhhHH
Confidence            99999999999999999999963  3689999999999865433        37899999665 4569999999999999


Q ss_pred             HHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCCHHH
Q 005986          313 MAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCLD  392 (666)
Q Consensus       313 LyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpTa~e  392 (666)
                      +|||++|++||.+            .....+   ...+......   ...+.++.+++++++||.+||++||++|||++|
T Consensus       199 lyell~g~~Pf~~------------~~~~~~---~~~i~~~~~~---~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e  260 (307)
T d1a06a_         199 AYILLCGYPPFYD------------ENDAKL---FEQILKAEYE---FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQ  260 (307)
T ss_dssp             HHHHHHSSCSCCC------------SSHHHH---HHHHHTTCCC---CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCCC------------CCHHHH---HHHHhccCCC---CCCccccCCCHHHHHHHHHHccCCHhHCcCHHH
Confidence            9999999999852            222222   2223222211   112345678999999999999999999999999


Q ss_pred             HhcCCCCCCCC
Q 005986          393 ALRHPFLCGPR  403 (666)
Q Consensus       393 lL~HP~f~~~~  403 (666)
                      +|+||||++..
T Consensus       261 il~hp~~~~~~  271 (307)
T d1a06a_         261 ALQHPWIAGDT  271 (307)
T ss_dssp             HHHSTTTTSSC
T ss_pred             HhcCHhhCCCC
Confidence            99999998744


No 7  
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=4.2e-53  Score=454.89  Aligned_cols=257  Identities=16%  Similarity=0.184  Sum_probs=211.1

Q ss_pred             cccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchhh-----HHHHHHHHHHHHHhhhccCCCCCc
Q 005986           83 FNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQA-----QRRGRRAIEVLKKLVRRRLMYHSY  157 (666)
Q Consensus        83 ~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~~-----~~~~~rEi~iL~~L~~~~~~~Hpn  157 (666)
                      +++++|++++.||+|+||    +||+|+++.     +|+.||||++.+...     .....+|..+++.++   ..+|||
T Consensus         1 lslddy~i~~~lG~G~fg----~Vy~~~~~~-----t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~---~~~hpn   68 (364)
T d1omwa3           1 LTMNDFSVHRIIGRGGFG----EVYGCRKAD-----TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS---TGDCPF   68 (364)
T ss_dssp             CCSTTEEEEEEEEECSSC----EEEEEEETT-----TCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHS---SSCCTT
T ss_pred             CCHHhCeeeeEEecCCCe----EEEEEEECC-----CCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHh---cCCCCc
Confidence            367999999999999999    999999998     899999999975322     233456655555553   235999


Q ss_pred             ceEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHH
Q 005986          158 SMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMR  237 (666)
Q Consensus       158 IVkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~  237 (666)
                      ||+++++|.     +.+.+|||||||++|+|.++|.+..         .++|                    ..++.|+.
T Consensus        69 Iv~l~~~~~-----~~~~~~ivmE~~~gg~L~~~l~~~~---------~~~e--------------------~~~~~~~~  114 (364)
T d1omwa3          69 IVCMSYAFH-----TPDKLSFILDLMNGGDLHYHLSQHG---------VFSE--------------------ADMRFYAA  114 (364)
T ss_dssp             BCCEEEEEE-----CSSEEEEEECCCCSCBHHHHHHHHC---------SCCH--------------------HHHHHHHH
T ss_pred             EEEEEEEEE-----ECCEEEEEEEecCCCcHHHHHHhcc---------cccH--------------------HHHHHHHH
Confidence            999999999     7889999999999999999998754         3444                    45788999


Q ss_pred             HHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC-------CCCCCCccccccccCCCchhhhhhHH
Q 005986          238 DLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED-------GPNNSSPDSNMDRRQMMIAFDMRCVG  310 (666)
Q Consensus       238 QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~-------~~~y~APEvl~~~~~ys~~sDIWSLG  310 (666)
                      ||+.||.|||++|||||||||+|||++. +|.+||+|||+|+.+...       .+.|+|||++.....|+.++||||||
T Consensus       115 qi~~aL~ylH~~~iiHrDlKP~NILl~~-~g~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlG  193 (364)
T d1omwa3         115 EIILGLEHMHNRFVVYRDLKPANILLDE-HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLG  193 (364)
T ss_dssp             HHHHHHHHHHHTTEECCCCSGGGEEECS-SSCEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHH
T ss_pred             HHHHHHHHHHHCCccceeeccceeEEcC-CCcEEEeeeceeeecCCCcccccccccccchhHHhhcCCCCCcccchhHHH
Confidence            9999999999999999999999999998 899999999999876543       37899999887777899999999999


Q ss_pred             HHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCC-
Q 005986          311 FMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRIS-  389 (666)
Q Consensus       311 viLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpT-  389 (666)
                      |++|||++|++||..            ................       ....+..+++++++||.+||++||++||| 
T Consensus       194 vilyemltG~~Pf~~------------~~~~~~~~~~~~~~~~-------~~~~~~~~s~~~~~li~~~L~~dP~~R~t~  254 (364)
T d1omwa3         194 CMLFKLLRGHSPFRQ------------HKTKDKHEIDRMTLTM-------AVELPDSFSPELRSLLEGLLQRDVNRRLGC  254 (364)
T ss_dssp             HHHHHHHHSSCSSCS------------SCSSCHHHHHHHSSSC-------CCCCCSSSCHHHHHHHHHHTCSSTTTSTTT
T ss_pred             HHHHHHHhCCCCCCC------------CCHHHHHHHHHhcccC-------CCCCCCCCCHHHHHHHHHHcccCHHHhCCC
Confidence            999999999999863            1222222222222222       12345678999999999999999999999 


Q ss_pred             ----HHHHhcCCCCCCCCCC
Q 005986          390 ----CLDALRHPFLCGPRWR  405 (666)
Q Consensus       390 ----a~elL~HP~f~~~~~~  405 (666)
                          |+|+++||||++++|.
T Consensus       255 ~~~~a~eil~Hp~f~~i~~~  274 (364)
T d1omwa3         255 LGRGAQEVKESPFFRSLDWQ  274 (364)
T ss_dssp             SSSTHHHHHTSGGGTTCCHH
T ss_pred             cccCHHHHHcCccccCCCHH
Confidence                7999999999998863


No 8  
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-53  Score=444.46  Aligned_cols=249  Identities=18%  Similarity=0.222  Sum_probs=207.4

Q ss_pred             CCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch--hhHHHHHHHHHHHHHhhhccCCCCCcceEEEE
Q 005986           86 GDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV--QAQRRGRRAIEVLKKLVRRRLMYHSYSMQVHG  163 (666)
Q Consensus        86 ~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~--~~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~~  163 (666)
                      +.|++++.||+|+||    +||+|+++.     +++.||||++...  ...+.+.+|+++|++++      |||||++++
T Consensus        12 d~Y~i~~~iG~G~fg----~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~------HpnIv~l~~   76 (288)
T d2jfla1          12 DFWEIIGELGDGAFG----KVYKAQNKE-----TSVLAAAKVIDTKSEEELEDYMVEIDILASCD------HPNIVKLLD   76 (288)
T ss_dssp             GTEEEEEEEEEETTE----EEEEEEETT-----TCCEEEEEEEECSSSGGGGGTHHHHHHHHHCC------CTTBCCEEE
T ss_pred             cCeEEeEEEeeCCCc----EEEEEEECC-----CCeEEEEEEECcCCHHHHHHHHHHHHHHHhCC------CCCCCeEEE
Confidence            469999999999999    999999998     8999999999753  33356789999999997      999999999


Q ss_pred             EEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHHH
Q 005986          164 YVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIGV  243 (666)
Q Consensus       164 ~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~aL  243 (666)
                      ++.     +.+.+|||||||++|+|.+++.+.+        ..++|                    ..++.|+.||+.||
T Consensus        77 ~~~-----~~~~~~lvmEy~~~g~L~~~~~~~~--------~~l~e--------------------~~~~~i~~qi~~gL  123 (288)
T d2jfla1          77 AFY-----YENNLWILIEFCAGGAVDAVMLELE--------RPLTE--------------------SQIQVVCKQTLDAL  123 (288)
T ss_dssp             EEE-----ETTEEEEEEECCTTEEHHHHHHHHT--------SCCCH--------------------HHHHHHHHHHHHHH
T ss_pred             EEe-----eCCeEEEEEecCCCCcHHHHHHhcC--------CCCCH--------------------HHHHHHHHHHHHHH
Confidence            999     7789999999999999999987532        13554                    45788999999999


Q ss_pred             HHHHhCCCCcCCCCCCceEEcCCCCceeeeccccccccc---------CCCCCCCCccccc----cccCCCchhhhhhHH
Q 005986          244 NYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFY---------EDGPNNSSPDSNM----DRRQMMIAFDMRCVG  310 (666)
Q Consensus       244 ~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~---------~~~~~y~APEvl~----~~~~ys~~sDIWSLG  310 (666)
                      +|||++||+||||||+|||++. ++.+||+|||+|+...         .+.+.|+|||++.    ....|+.++||||||
T Consensus       124 ~ylH~~~ivHrDiKp~NIll~~-~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlG  202 (288)
T d2jfla1         124 NYLHDNKIIHRDLKAGNILFTL-DGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG  202 (288)
T ss_dssp             HHHHHTTEECCCCSGGGEEECT-TSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHH
T ss_pred             HHHHHCCEEEeecChhheeECC-CCCEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHH
Confidence            9999999999999999999998 8999999999996542         2458899999764    345689999999999


Q ss_pred             HHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCCH
Q 005986          311 FMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISC  390 (666)
Q Consensus       311 viLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpTa  390 (666)
                      |++|||++|++||.+            .+....   +..+.....+    ....+..+++++++||.+||++||++|||+
T Consensus       203 vilyemltg~~Pf~~------------~~~~~~---~~~i~~~~~~----~~~~~~~~s~~~~~li~~~L~~dp~~R~t~  263 (288)
T d2jfla1         203 ITLIEMAEIEPPHHE------------LNPMRV---LLKIAKSEPP----TLAQPSRWSSNFKDFLKKCLEKNVDARWTT  263 (288)
T ss_dssp             HHHHHHHHSSCTTTT------------SCGGGH---HHHHHHSCCC----CCSSGGGSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             HHHHHHhhCCCCCCC------------CCHHHH---HHHHHcCCCC----CCCccccCCHHHHHHHHHHccCChhHCcCH
Confidence            999999999999863            222222   2222222211    223446789999999999999999999999


Q ss_pred             HHHhcCCCCCCC
Q 005986          391 LDALRHPFLCGP  402 (666)
Q Consensus       391 ~elL~HP~f~~~  402 (666)
                      +|+|+||||+..
T Consensus       264 ~ell~hp~~~~~  275 (288)
T d2jfla1         264 SQLLQHPFVTVD  275 (288)
T ss_dssp             HHHTTSGGGCCC
T ss_pred             HHHhcCcccCCC
Confidence            999999999753


No 9  
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.2e-54  Score=455.19  Aligned_cols=266  Identities=16%  Similarity=0.201  Sum_probs=208.4

Q ss_pred             cccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch---hhHHHHHHHHHHHHHhhhccCCCCCcce
Q 005986           83 FNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---QAQRRGRRAIEVLKKLVRRRLMYHSYSM  159 (666)
Q Consensus        83 ~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~---~~~~~~~rEi~iL~~L~~~~~~~HpnIV  159 (666)
                      +.-++|++++.||+|+||    +||+|+++.     +++.||+|+++..   .....+.+|+.+|++++      |||||
T Consensus         3 l~~d~y~~~~~iG~G~fg----~V~~~~~~~-----~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~------HpnIv   67 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGG----VVFKVSHKP-----SGLVMARKLIHLEIKPAIRNQIIRELQVLHECN------SPYIV   67 (322)
T ss_dssp             CCGGGEEEEEEEECCSSC----CEEEEEETT-----TTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCC------CTTBC
T ss_pred             CCccCCEEEEEEecCCCe----EEEEEEECC-----CCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCC------CCCCC
Confidence            456789999999999999    999999988     8999999999742   33456789999999996      99999


Q ss_pred             EEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHH
Q 005986          160 QVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDL  239 (666)
Q Consensus       160 kl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QI  239 (666)
                      +++++|.     +.+.+|||||||++|+|.+++.+.+         .+++                    ..++.++.||
T Consensus        68 ~l~~~~~-----~~~~~~iVmEy~~gg~L~~~l~~~~---------~l~~--------------------~~~~~~~~qi  113 (322)
T d1s9ja_          68 GFYGAFY-----SDGEISICMEHMDGGSLDQVLKKAG---------RIPE--------------------QILGKVSIAV  113 (322)
T ss_dssp             CEEEEEE-----CSSEEEEEEECCTTEEHHHHHHHHS---------SCCH--------------------HHHHHHHHHH
T ss_pred             cEEEEEE-----ECCEEEEEEEcCCCCcHHHHHhhcC---------CCCH--------------------HHHHHHHHHH
Confidence            9999999     7889999999999999999998754         3444                    4578999999


Q ss_pred             HHHHHHHHh-CCCCcCCCCCCceEEcCCCCceeeeccccccccc-------CCCCCCCCccccccccCCCchhhhhhHHH
Q 005986          240 LIGVNYLHS-HGLAHTELRLENVHISPVDRHIKVGILGNAADFY-------EDGPNNSSPDSNMDRRQMMIAFDMRCVGF  311 (666)
Q Consensus       240 l~aL~yLHs-~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~-------~~~~~y~APEvl~~~~~ys~~sDIWSLGv  311 (666)
                      +.||+|||+ +||+||||||+|||++. ++.+||+|||+|+.+.       .+.+.|+|||++.+ ..|+.++||||+||
T Consensus       114 l~aL~yLH~~~~IiHRDiKP~NILl~~-~~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~-~~y~~~~DiWSlGv  191 (322)
T d1s9ja_         114 IKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG-THYSVQSDIWSMGL  191 (322)
T ss_dssp             HHHHHHHHHHHCCCCSCCSGGGEEECT-TCCEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHC-SCCCTTHHHHHHHH
T ss_pred             HHHHHHHHHhCCEEccccCHHHeeECC-CCCEEEeeCCCccccCCCccccccCCccccCchHHcC-CCCCcHHHHHHHHH
Confidence            999999997 59999999999999998 8999999999998543       23488999997765 56999999999999


Q ss_pred             HHHHHHhCCCCChhhhh----hhhhccccCCCh-----------------------hhHHHHHHHHhccCCCCCCCCccc
Q 005986          312 MMAKMVLRELMDPLIFT----KFKSFLTKGIDP-----------------------SCLREFLLQVLNRNSSSGNTGFQI  364 (666)
Q Consensus       312 iLyemltG~~PF~~~~~----~~~~~~~~g~~~-----------------------~~l~~~~~~~~~~~~~~~~~~~~~  364 (666)
                      ++|||++|++||.....    ........|...                       ....+.........++.     ..
T Consensus       192 il~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  266 (322)
T d1s9ja_         192 SLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPK-----LP  266 (322)
T ss_dssp             HHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSCCCC-----CC
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCcc-----Cc
Confidence            99999999999963211    111111111110                       01111112222211110     11


Q ss_pred             ccCCcHHHHHHHHHhhhcCCCCCCCHHHHhcCCCCCCCCC
Q 005986          365 LDRNWGAGWNLLSLLLATKPSKRISCLDALRHPFLCGPRW  404 (666)
Q Consensus       365 ~~~~s~~~~dLI~~mL~~DP~~RpTa~elL~HP~f~~~~~  404 (666)
                      ....|.+++|||.+||++||++||||+|+|+||||++.++
T Consensus       267 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~~  306 (322)
T d1s9ja_         267 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA  306 (322)
T ss_dssp             BTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCCc
Confidence            1246889999999999999999999999999999987553


No 10 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.6e-53  Score=434.44  Aligned_cols=247  Identities=19%  Similarity=0.250  Sum_probs=201.1

Q ss_pred             eEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh----hHHHHHHHHHHHHHhhhccCCCCCcceEEEE
Q 005986           88 FKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ----AQRRGRRAIEVLKKLVRRRLMYHSYSMQVHG  163 (666)
Q Consensus        88 Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~----~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~~  163 (666)
                      |++.++||+|+||    +||+|+++.     +++.||+|++....    ..+.+.+|+++|++++      |||||++++
T Consensus        11 ~~~~~~iG~G~fg----~Vy~~~~~~-----~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~------HpnIv~~~~   75 (270)
T d1t4ha_          11 LKFDIEIGRGSFK----TVYKGLDTE-----TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ------HPNIVRFYD   75 (270)
T ss_dssp             EEEEEEEEECSSE----EEEEEEETT-----TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCC------CTTBCCEEE
T ss_pred             EEeeeEEecCcCc----EEEEEEECC-----CCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCC------CCCeeeEEE
Confidence            4788899999999    999999988     89999999987532    2345689999999997      999999999


Q ss_pred             EEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHHH
Q 005986          164 YVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIGV  243 (666)
Q Consensus       164 ~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~aL  243 (666)
                      ++.... .....+|||||||++|+|.+++.+.+         .+++                    ..++.|+.||+.||
T Consensus        76 ~~~~~~-~~~~~~~ivmE~~~~g~L~~~l~~~~---------~~~~--------------------~~~~~~~~qi~~gl  125 (270)
T d1t4ha_          76 SWESTV-KGKKCIVLVTELMTSGTLKTYLKRFK---------VMKI--------------------KVLRSWCRQILKGL  125 (270)
T ss_dssp             EEEEES-SSCEEEEEEEECCCSCBHHHHHHHHS---------SCCH--------------------HHHHHHHHHHHHHH
T ss_pred             EEeecc-ccCCEEEEEEeCCCCCcHHHHHhccc---------cccH--------------------HHHHHHHHHHHHHH
Confidence            997421 24567999999999999999998754         3444                    45788999999999


Q ss_pred             HHHHhCC--CCcCCCCCCceEEcCCCCceeeecccccccccCC-------CCCCCCccccccccCCCchhhhhhHHHHHH
Q 005986          244 NYLHSHG--LAHTELRLENVHISPVDRHIKVGILGNAADFYED-------GPNNSSPDSNMDRRQMMIAFDMRCVGFMMA  314 (666)
Q Consensus       244 ~yLHs~g--IvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~-------~~~y~APEvl~~~~~ys~~sDIWSLGviLy  314 (666)
                      +|||++|  |+||||||+|||++..++.+||+|||+|+.....       .+.|+|||++.  ..|+.++|||||||++|
T Consensus       126 ~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~--~~~~~~~DIwSlGvily  203 (270)
T d1t4ha_         126 QFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE--EKYDESVDVYAFGMCML  203 (270)
T ss_dssp             HHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGG--TCCCTHHHHHHHHHHHH
T ss_pred             HHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccCCcccCccccCHHHhC--CCCCCcCchhhHHHHHH
Confidence            9999999  9999999999999765789999999999765432       37899999664  35999999999999999


Q ss_pred             HHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCCHHHHh
Q 005986          315 KMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCLDAL  394 (666)
Q Consensus       315 emltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpTa~elL  394 (666)
                      ||++|++||.+.           .+...+   ...+.....     ........++++++||.+||++||++|||++|+|
T Consensus       204 el~~g~~Pf~~~-----------~~~~~~---~~~i~~~~~-----~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell  264 (270)
T d1t4ha_         204 EMATSEYPYSEC-----------QNAAQI---YRRVTSGVK-----PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL  264 (270)
T ss_dssp             HHHHSSCTTTTC-----------SSHHHH---HHHHTTTCC-----CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             HHHHCCCCCCCc-----------ccHHHH---HHHHHcCCC-----CcccCccCCHHHHHHHHHHccCCHhHCcCHHHHh
Confidence            999999998631           122222   222222211     1233456789999999999999999999999999


Q ss_pred             cCCCCC
Q 005986          395 RHPFLC  400 (666)
Q Consensus       395 ~HP~f~  400 (666)
                      +||||+
T Consensus       265 ~Hp~fk  270 (270)
T d1t4ha_         265 NHAFFQ  270 (270)
T ss_dssp             TSGGGC
T ss_pred             CCcccC
Confidence            999995


No 11 
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=6.1e-53  Score=451.23  Aligned_cols=257  Identities=16%  Similarity=0.192  Sum_probs=212.4

Q ss_pred             ccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch--hhHHHHHHHHHHHHHhhhccCCCCCcceEE
Q 005986           84 NMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV--QAQRRGRRAIEVLKKLVRRRLMYHSYSMQV  161 (666)
Q Consensus        84 ~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~--~~~~~~~rEi~iL~~L~~~~~~~HpnIVkl  161 (666)
                      .+++|++++.||+|+||    +||+|+++.     +|+.||||++...  ...+.+.+|+.+|++|+      |||||++
T Consensus        24 il~~Y~i~~~lG~G~fg----~Vy~~~~~~-----~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~------HpnIv~~   88 (350)
T d1koaa2          24 VLDHYDIHEELGTGAFG----VVHRVTERA-----TGNNFAAKFVMTPHESDKETVRKEIQTMSVLR------HPTLVNL   88 (350)
T ss_dssp             GGGTEEEEEEEEEETTE----EEEEEEETT-----TTEEEEEEEECCCSHHHHHHHHHHHHHHHHTC------CTTBCCE
T ss_pred             CccCeEEEEEEecCcCe----EEEEEEECC-----CCCEEEEEEEcccchhhHHHHHHHHHHHHhCC------CCCCCcE
Confidence            36899999999999999    999999998     8999999999753  33456789999999997      9999999


Q ss_pred             EEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHH
Q 005986          162 HGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLI  241 (666)
Q Consensus       162 ~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~  241 (666)
                      ++++.     +.+.+|||||||++|+|.+++.+..        ..++|                    ..++.|+.||+.
T Consensus        89 ~~~~~-----~~~~~~ivmE~~~gg~L~~~l~~~~--------~~l~e--------------------~~~~~i~~qi~~  135 (350)
T d1koaa2          89 HDAFE-----DDNEMVMIYEFMSGGELFEKVADEH--------NKMSE--------------------DEAVEYMRQVCK  135 (350)
T ss_dssp             EEEEE-----ETTEEEEEECCCCSCBHHHHHTCTT--------SCBCH--------------------HHHHHHHHHHHH
T ss_pred             EEEEE-----ECCEEEEEEEcCCCCCHHHHHHhhc--------CCCCH--------------------HHHHHHHHHHHH
Confidence            99999     7789999999999999999996532        13454                    557899999999


Q ss_pred             HHHHHHhCCCCcCCCCCCceEEcC-CCCceeeecccccccccCC--------CCCCCCccccccccCCCchhhhhhHHHH
Q 005986          242 GVNYLHSHGLAHTELRLENVHISP-VDRHIKVGILGNAADFYED--------GPNNSSPDSNMDRRQMMIAFDMRCVGFM  312 (666)
Q Consensus       242 aL~yLHs~gIvHRDLKPeNILi~~-~~g~vKL~DFGlA~~~~~~--------~~~y~APEvl~~~~~ys~~sDIWSLGvi  312 (666)
                      ||+|||++|||||||||+|||++. .++.+||+|||+|+.+...        .+.|||||++. ...|+.++|||||||+
T Consensus       136 aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~-~~~~~~~~DiwSlGvi  214 (350)
T d1koaa2         136 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAE-GKPVGYYTDMWSVGVL  214 (350)
T ss_dssp             HHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHH-TCCBCHHHHHHHHHHH
T ss_pred             HHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccceecCcccccCHHHHc-CCCCChhHhhhhhhHH
Confidence            999999999999999999999975 2578999999999876543        37899999665 4568999999999999


Q ss_pred             HHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCCHHH
Q 005986          313 MAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCLD  392 (666)
Q Consensus       313 LyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpTa~e  392 (666)
                      +|||++|++||.            +.+.......   +......   .....+..+++++++||.+||++||++|||++|
T Consensus       215 lyell~G~~Pf~------------~~~~~~~~~~---i~~~~~~---~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e  276 (350)
T d1koaa2         215 SYILLSGLSPFG------------GENDDETLRN---VKSCDWN---MDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQ  276 (350)
T ss_dssp             HHHHHHSSCSSC------------CSSHHHHHHH---HHHTCCC---SCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             HHHHHhCCCCCC------------CCCHHHHHHH---HHhCCCC---CCcccccCCCHHHHHHHHHHccCChhHCcCHHH
Confidence            999999999985            2333333222   2222111   112344578999999999999999999999999


Q ss_pred             HhcCCCCCCCCCCCC
Q 005986          393 ALRHPFLCGPRWRVD  407 (666)
Q Consensus       393 lL~HP~f~~~~~~~~  407 (666)
                      +|+||||+...++..
T Consensus       277 il~hp~~~~~~~~~~  291 (350)
T d1koaa2         277 ALEHPWLTPGNAPGR  291 (350)
T ss_dssp             HHHSTTTSCTTCCSC
T ss_pred             HhcCcccCCCCCCCc
Confidence            999999998775443


No 12 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.2e-53  Score=441.47  Aligned_cols=252  Identities=18%  Similarity=0.215  Sum_probs=206.6

Q ss_pred             CCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh--------hHHHHHHHHHHHHHhhhccCCCCCc
Q 005986           86 GDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ--------AQRRGRRAIEVLKKLVRRRLMYHSY  157 (666)
Q Consensus        86 ~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~--------~~~~~~rEi~iL~~L~~~~~~~Hpn  157 (666)
                      ++|++++.||+|+||    +||+|+++.     +|+.||||++++..        ..+.+.+|+.+|++++      |||
T Consensus        10 d~Y~~~~~lG~G~fg----~Vy~~~~~~-----~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~------Hpn   74 (293)
T d1jksa_          10 DYYDTGEELGSGQFA----VVKKCREKS-----TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ------HPN   74 (293)
T ss_dssp             GTEEEEEEEEECSSE----EEEEEEETT-----TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC------CTT
T ss_pred             cCEEEeEEEecCCCe----EEEEEEECC-----CCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCC------CCC
Confidence            679999999999999    999999988     89999999996421        2356789999999997      999


Q ss_pred             ceEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHH
Q 005986          158 SMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMR  237 (666)
Q Consensus       158 IVkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~  237 (666)
                      ||+++++|.     +.+.+|||||||++|+|.++|.+.+         .+++                    ..++.+++
T Consensus        75 Iv~~~~~~~-----~~~~~~iv~E~~~gg~L~~~i~~~~---------~l~~--------------------~~~~~~~~  120 (293)
T d1jksa_          75 VITLHEVYE-----NKTDVILILELVAGGELFDFLAEKE---------SLTE--------------------EEATEFLK  120 (293)
T ss_dssp             BCCEEEEEE-----CSSEEEEEEECCCSCBHHHHHHHHS---------SCCH--------------------HHHHHHHH
T ss_pred             CCcEEEEEE-----ECCEEEEEEEcCCCccccchhcccc---------ccch--------------------hHHHHHHH
Confidence            999999999     8899999999999999999998754         3554                    45788999


Q ss_pred             HHHHHHHHHHhCCCCcCCCCCCceEEcCCCC----ceeeecccccccccCCC--------CCCCCccccccccCCCchhh
Q 005986          238 DLLIGVNYLHSHGLAHTELRLENVHISPVDR----HIKVGILGNAADFYEDG--------PNNSSPDSNMDRRQMMIAFD  305 (666)
Q Consensus       238 QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g----~vKL~DFGlA~~~~~~~--------~~y~APEvl~~~~~ys~~sD  305 (666)
                      ||+.||+|||++||+||||||+|||++. ++    .+||+|||+|.....+.        +.|+|||++. ...|+.++|
T Consensus       121 qi~~al~yLH~~~ivHrDiKp~Nill~~-~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~-~~~~~~~~D  198 (293)
T d1jksa_         121 QILNGVYYLHSLQIAHFDLKPENIMLLD-RNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN-YEPLGLEAD  198 (293)
T ss_dssp             HHHHHHHHHHHTTEECCCCSGGGEEESC-SSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHT-TCCBCTHHH
T ss_pred             HHHHHHHhhhhcceeecccccceEEEec-CCCcccceEecchhhhhhcCCCccccccCCCCcccCHHHHc-CCCCCCccc
Confidence            9999999999999999999999999987 44    59999999998765432        6799999665 456899999


Q ss_pred             hhhHHHHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCC
Q 005986          306 MRCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPS  385 (666)
Q Consensus       306 IWSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~  385 (666)
                      ||||||++|||++|++||.+            .+.....   ..+......   .....+..+++++++||.+||++||+
T Consensus       199 iwSlGvilyell~g~~Pf~~------------~~~~~~~---~~i~~~~~~---~~~~~~~~~s~~~~~li~~~L~~dP~  260 (293)
T d1jksa_         199 MWSIGVITYILLSGASPFLG------------DTKQETL---ANVSAVNYE---FEDEYFSNTSALAKDFIRRLLVKDPK  260 (293)
T ss_dssp             HHHHHHHHHHHHHSSCSSCC------------SSHHHHH---HHHHTTCCC---CCHHHHTTSCHHHHHHHHTTSCSSGG
T ss_pred             chhhhHHHHHHHcCCCCCCC------------CCHHHHH---HHHHhcCCC---CCchhcCCCCHHHHHHHHHHccCChh
Confidence            99999999999999999852            3332222   222222111   11234467899999999999999999


Q ss_pred             CCCCHHHHhcCCCCCCCCCCC
Q 005986          386 KRISCLDALRHPFLCGPRWRV  406 (666)
Q Consensus       386 ~RpTa~elL~HP~f~~~~~~~  406 (666)
                      +|||++|+|+||||+..+|..
T Consensus       261 ~R~s~~eil~hp~~~~~~~~~  281 (293)
T d1jksa_         261 KRMTIQDSLQHPWIKPKDTQQ  281 (293)
T ss_dssp             GSCCHHHHHHSTTTCC-----
T ss_pred             HCcCHHHHhcCcccCCCChhH
Confidence            999999999999999877543


No 13 
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.7e-53  Score=437.90  Aligned_cols=249  Identities=17%  Similarity=0.216  Sum_probs=196.1

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh----hHHHHHHHHHHHHHhhhccCCCCCcceE
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ----AQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~----~~~~~~rEi~iL~~L~~~~~~~HpnIVk  160 (666)
                      .++|++++.||+|+||    +||+|+++.     +|+.||||.+....    ..+.+.+|+++|++++      |||||+
T Consensus         3 ~edy~~~~~iG~G~fg----~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~------HpnIv~   67 (269)
T d2java1           3 AEDYEVLYTIGTGSYG----RCQKIRRKS-----DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK------HPNIVR   67 (269)
T ss_dssp             GGGEEEEEEEEECSSE----EEEEEEETT-----TCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCC------CTTBCC
T ss_pred             chhCEEeEEEecCCCe----EEEEEEECC-----CCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCC------CCCEee
Confidence            4789999999999999    999999998     89999999997532    2345689999999996      999999


Q ss_pred             EEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHH
Q 005986          161 VHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLL  240 (666)
Q Consensus       161 l~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl  240 (666)
                      +++++.+.   ..+.+|||||||++|+|.+++.+..     .....++|                    ..++.++.||+
T Consensus        68 ~~~~~~~~---~~~~~~ivmEy~~~g~L~~~i~~~~-----~~~~~l~e--------------------~~~~~i~~qi~  119 (269)
T d2java1          68 YYDRIIDR---TNTTLYIVMEYCEGGDLASVITKGT-----KERQYLDE--------------------EFVLRVMTQLT  119 (269)
T ss_dssp             EEEEEEC-------CEEEEEECCTTEEHHHHHHHHH-----HHTCCCCH--------------------HHHHHHHHHHH
T ss_pred             EEEEEEeC---CCCEEEEEEecCCCCcHHHHHHhcc-----ccCCCCCH--------------------HHHHHHHHHHH
Confidence            99999732   4667999999999999999997531     11123444                    56899999999


Q ss_pred             HHHHHHHhCC-----CCcCCCCCCceEEcCCCCceeeecccccccccCC---------CCCCCCccccccccCCCchhhh
Q 005986          241 IGVNYLHSHG-----LAHTELRLENVHISPVDRHIKVGILGNAADFYED---------GPNNSSPDSNMDRRQMMIAFDM  306 (666)
Q Consensus       241 ~aL~yLHs~g-----IvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~---------~~~y~APEvl~~~~~ys~~sDI  306 (666)
                      .||+|||++|     ||||||||+|||++. ++.+||+|||+|+.+...         .+.|+|||++ ....|+.++||
T Consensus       120 ~al~ylH~~~~~~~~IiHrDiKp~NIll~~-~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l-~~~~~~~~~DI  197 (269)
T d2java1         120 LALKECHRRSDGGHTVLHRDLKPANVFLDG-KQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM-NRMSYNEKSDI  197 (269)
T ss_dssp             HHHHHHHHHCC---------CCGGGEEECT-TSCEEECCHHHHHHC-----------CCCSCCCHHHH-TTCCCCHHHHH
T ss_pred             HHHHHHHHhcCCCCCEEeCcCchhhcCcCC-CCcEEEeeccceeecccCCCccccCCCCcccCCHHHH-cCCCCChHHHH
Confidence            9999999976     999999999999998 899999999999865432         3789999965 45569999999


Q ss_pred             hhHHHHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCC
Q 005986          307 RCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSK  386 (666)
Q Consensus       307 WSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~  386 (666)
                      |||||++|||++|++||..            .+...+...   +.....+      ..+..+++++++||.+||+.||++
T Consensus       198 wSlGvilyel~tg~~Pf~~------------~~~~~~~~~---i~~~~~~------~~~~~~s~~l~~li~~~L~~dp~~  256 (269)
T d2java1         198 WSLGCLLYELCALMPPFTA------------FSQKELAGK---IREGKFR------RIPYRYSDELNEIITRMLNLKDYH  256 (269)
T ss_dssp             HHHHHHHHHHHHSSCSCCC------------SSHHHHHHH---HHHTCCC------CCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HhhCHHHHHHhhCCCCCCC------------CCHHHHHHH---HHcCCCC------CCCcccCHHHHHHHHHHcCCChhH
Confidence            9999999999999999852            333333322   2222211      234568899999999999999999


Q ss_pred             CCCHHHHhcCCCC
Q 005986          387 RISCLDALRHPFL  399 (666)
Q Consensus       387 RpTa~elL~HP~f  399 (666)
                      |||++|+|+|||+
T Consensus       257 Rps~~ell~hp~i  269 (269)
T d2java1         257 RPSVEEILENPLI  269 (269)
T ss_dssp             SCCHHHHHTSTTC
T ss_pred             CcCHHHHHhCCcC
Confidence            9999999999996


No 14 
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=6.2e-53  Score=445.14  Aligned_cols=250  Identities=17%  Similarity=0.250  Sum_probs=212.0

Q ss_pred             cccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh-----hHHHHHHHHHHHHHhhhccCCCCCc
Q 005986           83 FNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-----AQRRGRRAIEVLKKLVRRRLMYHSY  157 (666)
Q Consensus        83 ~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~-----~~~~~~rEi~iL~~L~~~~~~~Hpn  157 (666)
                      |.+++|++++.||+|+||    +||+|+++.     +|+.||||++++..     ..+.+.+|+.+|+.++      |||
T Consensus         1 ~sl~dy~i~~~lG~G~fg----~Vy~a~~~~-----~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~------Hpn   65 (316)
T d1fota_           1 YSLQDFQILRTLGTGSFG----RVHLIRSRH-----NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT------HPF   65 (316)
T ss_dssp             CCGGGEEEEEEEEECSSC----EEEEEEETT-----TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC------BTT
T ss_pred             CchhHeEEEEEEecCcCc----EEEEEEECC-----CCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhcc------CcC
Confidence            467899999999999999    999999988     89999999997532     2355789999999997      999


Q ss_pred             ceEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHH
Q 005986          158 SMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMR  237 (666)
Q Consensus       158 IVkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~  237 (666)
                      ||++++++.     +.+.+|+|||||.||+|.+++....         .+++                    ..++.++.
T Consensus        66 Iv~~~~~~~-----~~~~~~ivmE~~~gg~l~~~~~~~~---------~~~~--------------------~~~~~~~~  111 (316)
T d1fota_          66 IIRMWGTFQ-----DAQQIFMIMDYIEGGELFSLLRKSQ---------RFPN--------------------PVAKFYAA  111 (316)
T ss_dssp             BCCEEEEEE-----CSSEEEEEECCCCSCBHHHHHHHTS---------SCCH--------------------HHHHHHHH
T ss_pred             hhheeeeEe-----eCCeeeeEeeecCCccccccccccc---------cccc--------------------cHHHHHHH
Confidence            999999999     8899999999999999999998764         3333                    45788999


Q ss_pred             HHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC------CCCCCCccccccccCCCchhhhhhHHH
Q 005986          238 DLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED------GPNNSSPDSNMDRRQMMIAFDMRCVGF  311 (666)
Q Consensus       238 QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~------~~~y~APEvl~~~~~ys~~sDIWSLGv  311 (666)
                      ||+.||+|||++|||||||||+|||++. +|.+||+|||+|+.....      .+.|+|||++. ...|+.++|||||||
T Consensus       112 qi~~al~~lH~~~iiHrDiKp~NILl~~-~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~-~~~y~~~~DiwSlGv  189 (316)
T d1fota_         112 EVCLALEYLHSKDIIYRDLKPENILLDK-NGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVS-TKPYNKSIDWWSFGI  189 (316)
T ss_dssp             HHHHHHHHHHTTTEECCCCCGGGEEECT-TSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHT-TCCBCTTHHHHHHHH
T ss_pred             HHHHhhhhhccCcEEccccCchheeEcC-CCCEEEecCccceEeccccccccCcccccCHHHHc-CCCCCchhhccccch
Confidence            9999999999999999999999999998 999999999999876433      37899999654 556999999999999


Q ss_pred             HHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCC---
Q 005986          312 MMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRI---  388 (666)
Q Consensus       312 iLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp---  388 (666)
                      ++|||++|++||.+            .+...+   +..+....       ...++.+++++++||.+||++||.+|+   
T Consensus       190 ilyemltG~~Pf~~------------~~~~~~---~~~i~~~~-------~~~p~~~s~~~~~li~~~L~~dp~~R~~~~  247 (316)
T d1fota_         190 LIYEMLAGYTPFYD------------SNTMKT---YEKILNAE-------LRFPPFFNEDVKDLLSRLITRDLSQRLGNL  247 (316)
T ss_dssp             HHHHHHHSSCTTCC------------SSHHHH---HHHHHHCC-------CCCCTTSCHHHHHHHHHHTCSCTTTCTTSS
T ss_pred             hHHHHHhCCCCCCC------------cCHHHH---HHHHHcCC-------CCCCCCCCHHHHHHHHHHhhhCHHhccccc
Confidence            99999999999852            333222   22333322       233456889999999999999999996   


Q ss_pred             --CHHHHhcCCCCCCCCCC
Q 005986          389 --SCLDALRHPFLCGPRWR  405 (666)
Q Consensus       389 --Ta~elL~HP~f~~~~~~  405 (666)
                        |++++|+||||++++|.
T Consensus       248 r~t~~~il~Hp~f~~i~~~  266 (316)
T d1fota_         248 QNGTEDVKNHPWFKEVVWE  266 (316)
T ss_dssp             TTTTHHHHTSGGGSSCCHH
T ss_pred             hhhHHHHHcCcccccCCHH
Confidence              99999999999998864


No 15 
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=7.8e-53  Score=450.76  Aligned_cols=252  Identities=19%  Similarity=0.232  Sum_probs=209.4

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch--hhHHHHHHHHHHHHHhhhccCCCCCcceEEE
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV--QAQRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~--~~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~  162 (666)
                      .++|++++.||+|+||    +||+|+++.     +|+.||||+++..  .....+.+|+++|++|+      |||||+++
T Consensus        28 ~d~Y~i~~~lG~G~fg----~V~~a~~~~-----~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~------HpnIv~~~   92 (352)
T d1koba_          28 YDYYDILEELGSGAFG----VVHRCVEKA-----TGRVFVAKFINTPYPLDKYTVKNEISIMNQLH------HPKLINLH   92 (352)
T ss_dssp             GGTEEEEEEEEEETTE----EEEEEEETT-----TCCEEEEEEEECCSHHHHHHHHHHHHHHTTCC------STTBCCEE
T ss_pred             ccceEEEEEEecCCCe----EEEEEEECC-----CCCEEEEEEECCcchhHHHHHHHHHHHHHhCC------CCCCCcEE
Confidence            4789999999999999    999999988     8999999999753  23445689999999997      99999999


Q ss_pred             EEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHH
Q 005986          163 GYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIG  242 (666)
Q Consensus       163 ~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~a  242 (666)
                      ++|.     +++.+|||||||++|+|.+++.+.+        ..|+|                    ..++.|+.||+.|
T Consensus        93 ~~~~-----~~~~~~ivmE~~~gg~L~~~~~~~~--------~~l~e--------------------~~~~~i~~qi~~a  139 (352)
T d1koba_          93 DAFE-----DKYEMVLILEFLSGGELFDRIAAED--------YKMSE--------------------AEVINYMRQACEG  139 (352)
T ss_dssp             EEEE-----CSSEEEEEEECCCCCBHHHHTTCTT--------CCBCH--------------------HHHHHHHHHHHHH
T ss_pred             EEEE-----ECCEEEEEEEcCCCChHHHHHHhcC--------CCCCH--------------------HHHHHHHHHHHHH
Confidence            9999     8899999999999999999886642        13554                    5578899999999


Q ss_pred             HHHHHhCCCCcCCCCCCceEEcC-CCCceeeecccccccccCCC--------CCCCCccccccccCCCchhhhhhHHHHH
Q 005986          243 VNYLHSHGLAHTELRLENVHISP-VDRHIKVGILGNAADFYEDG--------PNNSSPDSNMDRRQMMIAFDMRCVGFMM  313 (666)
Q Consensus       243 L~yLHs~gIvHRDLKPeNILi~~-~~g~vKL~DFGlA~~~~~~~--------~~y~APEvl~~~~~ys~~sDIWSLGviL  313 (666)
                      |+|||++|||||||||+|||++. .++.+||+|||+|+.+....        +.|+|||++. ...|+.++|||||||++
T Consensus       140 L~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil  218 (352)
T d1koba_         140 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVD-REPVGFYTDMWAIGVLG  218 (352)
T ss_dssp             HHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHT-TCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCceeeccCcccccCHHHHc-CCCCCCccchHHHHHHH
Confidence            99999999999999999999984 36899999999998775443        7899999654 55699999999999999


Q ss_pred             HHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCCHHHH
Q 005986          314 AKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCLDA  393 (666)
Q Consensus       314 yemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpTa~el  393 (666)
                      |||++|++||.+            .+.......   +.......   ....+..+++++++||.+||++||.+|||++|+
T Consensus       219 yelltG~~Pf~~------------~~~~~~~~~---i~~~~~~~---~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~ei  280 (352)
T d1koba_         219 YVLLSGLSPFAG------------EDDLETLQN---VKRCDWEF---DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDA  280 (352)
T ss_dssp             HHHHHSCCSSCC------------SSHHHHHHH---HHHCCCCC---CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             HHHHhCCCCCCC------------CCHHHHHHH---HHhCCCCC---CcccccCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            999999999853            333322222   22222111   123446789999999999999999999999999


Q ss_pred             hcCCCCCCCC
Q 005986          394 LRHPFLCGPR  403 (666)
Q Consensus       394 L~HP~f~~~~  403 (666)
                      |+||||++..
T Consensus       281 l~Hp~~~~~~  290 (352)
T d1koba_         281 LEHPWLKGDH  290 (352)
T ss_dssp             HTSTTTSSCC
T ss_pred             hcCHhhCCCc
Confidence            9999998754


No 16 
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.1e-52  Score=437.03  Aligned_cols=255  Identities=20%  Similarity=0.240  Sum_probs=201.6

Q ss_pred             EEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchhh-------HHHHHHHHHHHHHhhhccCCCCCcceEEE
Q 005986           90 ILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQA-------QRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (666)
Q Consensus        90 i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~~-------~~~~~rEi~iL~~L~~~~~~~HpnIVkl~  162 (666)
                      .++.||+|+||    +||+|+++.     +|+.||||+++....       .+.+.+|+++|++++      |||||+++
T Consensus         2 ~l~~lG~G~fg----~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~------hpnIv~~~   66 (299)
T d1ua2a_           2 KLDFLGEGQFA----TVYKARDKN-----TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS------HPNIIGLL   66 (299)
T ss_dssp             EEEEEEEETTE----EEEEEECSS-----CCSEEEEEEC------------CTHHHHHHHHHHHCC------CTTBCCEE
T ss_pred             cceEeccCcCe----EEEEEEECC-----CCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCC------CCCEeEEE
Confidence            57899999999    999999987     899999999974321       234689999999997      99999999


Q ss_pred             EEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHH
Q 005986          163 GYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIG  242 (666)
Q Consensus       163 ~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~a  242 (666)
                      +++.     +++.+|||||||.+|++..++....         .++++                    .++.+++||+.|
T Consensus        67 ~~~~-----~~~~~~ivmE~~~~~~~~~~~~~~~---------~l~~~--------------------~~~~~~~qil~a  112 (299)
T d1ua2a_          67 DAFG-----HKSNISLVFDFMETDLEVIIKDNSL---------VLTPS--------------------HIKAYMLMTLQG  112 (299)
T ss_dssp             EEEC-----CTTCCEEEEECCSEEHHHHHTTCCS---------SCCSS--------------------HHHHHHHHHHHH
T ss_pred             eeec-----cCCceeehhhhhcchHHhhhhhccc---------CCCHH--------------------HHHHHHHHHHHH
Confidence            9999     7788999999999977776655432         35543                    478899999999


Q ss_pred             HHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccC---------CCCCCCCccccccccCCCchhhhhhHHHHH
Q 005986          243 VNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE---------DGPNNSSPDSNMDRRQMMIAFDMRCVGFMM  313 (666)
Q Consensus       243 L~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~---------~~~~y~APEvl~~~~~ys~~sDIWSLGviL  313 (666)
                      |+|||++||+||||||+|||++. ++.+||+|||+|+....         +.+.|+|||++.+...|+.++|||||||++
T Consensus       113 L~~lH~~~iiHrDiKp~NIli~~-~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil  191 (299)
T d1ua2a_         113 LEYLHQHWILHRDLKPNNLLLDE-NGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCIL  191 (299)
T ss_dssp             HHHHHHTTCCCCCCCGGGEEECT-TCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHH
T ss_pred             HHHhhccceecccCCcceEEecC-CCccccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHH
Confidence            99999999999999999999998 99999999999976644         237899999887788899999999999999


Q ss_pred             HHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCC------------CC------cccccCCcHHHHHH
Q 005986          314 AKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGN------------TG------FQILDRNWGAGWNL  375 (666)
Q Consensus       314 yemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~------------~~------~~~~~~~s~~~~dL  375 (666)
                      |||++|.+||..            .........+...+..+.....            ..      .......++++++|
T Consensus       192 ~el~~g~~pf~~------------~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dl  259 (299)
T d1ua2a_         192 AELLLRVPFLPG------------DSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDL  259 (299)
T ss_dssp             HHHHHSSCSSCC------------SSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHH
T ss_pred             HHHHhCcCCCCC------------CCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHH
Confidence            999999999863            2222222222222221111100            00      01234678999999


Q ss_pred             HHHhhhcCCCCCCCHHHHhcCCCCCCCCCCC
Q 005986          376 LSLLLATKPSKRISCLDALRHPFLCGPRWRV  406 (666)
Q Consensus       376 I~~mL~~DP~~RpTa~elL~HP~f~~~~~~~  406 (666)
                      |.+||++||++||||+|+|+||||++.+.+.
T Consensus       260 l~~~L~~dP~~R~sa~e~L~Hp~f~~~p~p~  290 (299)
T d1ua2a_         260 IQGLFLFNPCARITATQALKMKYFSNRPGPT  290 (299)
T ss_dssp             HHHHHCSSTTTSCCHHHHHTSGGGTSSSCCC
T ss_pred             HHHHccCChhhCcCHHHHhCCHhhCCCCCCC
Confidence            9999999999999999999999999876443


No 17 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=3.8e-52  Score=431.13  Aligned_cols=250  Identities=21%  Similarity=0.265  Sum_probs=209.5

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh-----------hHHHHHHHHHHHHHhhhccCC
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-----------AQRRGRRAIEVLKKLVRRRLM  153 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~-----------~~~~~~rEi~iL~~L~~~~~~  153 (666)
                      .++|++++.||+|+||    +||+|+++.     +++.||||++++..           ..+.+.+|+.+|++++     
T Consensus         2 ~~~y~~~~~iG~G~~g----~V~~~~~~~-----~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----   67 (277)
T d1phka_           2 YENYEPKEILGRGVSS----VVRRCIHKP-----TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS-----   67 (277)
T ss_dssp             TTTEEEEEEEEECSSE----EEEEEEETT-----TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             cccCEEceEEecCcCe----EEEEEEECC-----CCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhc-----
Confidence            4789999999999999    999999987     89999999996421           2235689999999997     


Q ss_pred             CCCcceEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHH
Q 005986          154 YHSYSMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIR  233 (666)
Q Consensus       154 ~HpnIVkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~  233 (666)
                      .|||||++++++.     +++.+|||||||++|||.++|+.++         .++|                    ..++
T Consensus        68 ~hpnIv~~~~~~~-----~~~~~~ivmE~~~~g~L~~~l~~~~---------~l~e--------------------~~~~  113 (277)
T d1phka_          68 GHPNIIQLKDTYE-----TNTFFFLVFDLMKKGELFDYLTEKV---------TLSE--------------------KETR  113 (277)
T ss_dssp             TCTTBCCEEEEEE-----CSSEEEEEEECCTTCBHHHHHHHHS---------SCCH--------------------HHHH
T ss_pred             CCCCeEEEEeecc-----cCcceEEEEEcCCCchHHHHHHhcC---------CCCH--------------------HHHH
Confidence            6999999999999     8899999999999999999998754         4554                    4578


Q ss_pred             HHHHHHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCCC--------CCCCCccccc-----cccCC
Q 005986          234 LLMRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG--------PNNSSPDSNM-----DRRQM  300 (666)
Q Consensus       234 ~i~~QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~~--------~~y~APEvl~-----~~~~y  300 (666)
                      .|+.||+.||+|||++||+||||||+|||++. ++.+||+|||+|+.+....        +.|+|||.+.     ....|
T Consensus       114 ~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~-~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~  192 (277)
T d1phka_         114 KIMRALLEVICALHKLNIVHRDLKPENILLDD-DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGY  192 (277)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-TCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCB
T ss_pred             HHHHHHHHHHHHHHHcCCcccccccceEEEcC-CCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCC
Confidence            89999999999999999999999999999998 9999999999998765432        6789999765     34467


Q ss_pred             CchhhhhhHHHHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhh
Q 005986          301 MIAFDMRCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLL  380 (666)
Q Consensus       301 s~~sDIWSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL  380 (666)
                      +.++||||+||++|||++|++||.+            .+.......   +......   ...+...++|+++++||.+||
T Consensus       193 ~~~~DiwslGvilyeml~g~~Pf~~------------~~~~~~~~~---i~~~~~~---~~~~~~~~~s~~~~~li~~~L  254 (277)
T d1phka_         193 GKEVDMWSTGVIMYTLLAGSPPFWH------------RKQMLMLRM---IMSGNYQ---FGSPEWDDYSDTVKDLVSRFL  254 (277)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCC------------SSHHHHHHH---HHHTCCC---CCTTTGGGSCHHHHHHHHHHC
T ss_pred             CchheEcccchhhhhhccCCCCCCC------------CCHHHHHHH---HHhCCCC---CCCcccccCCHHHHHHHHHHc
Confidence            8999999999999999999999853            333333222   2222211   122345578999999999999


Q ss_pred             hcCCCCCCCHHHHhcCCCCCC
Q 005986          381 ATKPSKRISCLDALRHPFLCG  401 (666)
Q Consensus       381 ~~DP~~RpTa~elL~HP~f~~  401 (666)
                      ++||++|||++|+|+||||++
T Consensus       255 ~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         255 VVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             CSSGGGSCCHHHHTTSGGGCT
T ss_pred             cCChhHCcCHHHHHcCHHHHH
Confidence            999999999999999999986


No 18 
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=2.7e-52  Score=446.27  Aligned_cols=248  Identities=17%  Similarity=0.222  Sum_probs=211.5

Q ss_pred             ccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh-----hHHHHHHHHHHHHHhhhccCCCCCcc
Q 005986           84 NMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-----AQRRGRRAIEVLKKLVRRRLMYHSYS  158 (666)
Q Consensus        84 ~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~-----~~~~~~rEi~iL~~L~~~~~~~HpnI  158 (666)
                      .+++|++++.||+|+||    +||+|+++.     +|+.||||++.+..     ..+.+.+|+++|+.++      ||||
T Consensus        39 ~ld~y~i~~~lG~G~fg----~Vy~a~~~~-----~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~------hpnI  103 (350)
T d1rdqe_          39 QLDQFDRIKTLGTGSFG----RVMLVKHKE-----SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN------FPFL  103 (350)
T ss_dssp             CGGGEEEEEEEEECSSC----EEEEEEETT-----TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC------CTTB
T ss_pred             CccCeEEEEEeecCcCc----EEEEEEECC-----CCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcC------CCcE
Confidence            46899999999999999    999999998     89999999997532     2345689999999996      9999


Q ss_pred             eEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHH
Q 005986          159 MQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRD  238 (666)
Q Consensus       159 Vkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~Q  238 (666)
                      |++++++.     +...+|+||||+.+|+|.+++.+.+         .++|                    ..++.|+.|
T Consensus       104 v~~~~~~~-----~~~~~~~v~e~~~~g~l~~~l~~~~---------~l~e--------------------~~~~~i~~q  149 (350)
T d1rdqe_         104 VKLEFSFK-----DNSNLYMVMEYVAGGEMFSHLRRIG---------RFSE--------------------PHARFYAAQ  149 (350)
T ss_dssp             CCEEEEEE-----CSSEEEEEEECCTTCBHHHHHHHHC---------CCCH--------------------HHHHHHHHH
T ss_pred             eecccccc-----cccccccccccccccchhhhHhhcC---------CCCH--------------------HHHHHHHHH
Confidence            99999999     8889999999999999999998764         3554                    457889999


Q ss_pred             HHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC------CCCCCCccccccccCCCchhhhhhHHHH
Q 005986          239 LLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED------GPNNSSPDSNMDRRQMMIAFDMRCVGFM  312 (666)
Q Consensus       239 Il~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~------~~~y~APEvl~~~~~ys~~sDIWSLGvi  312 (666)
                      |+.||.|||++|||||||||+|||++. +|.+||+|||+|+.....      .+.|||||++. ...|+.++|||||||+
T Consensus       150 i~~aL~yLH~~~iiHRDIKP~NILl~~-~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~-~~~~~~~~DiwSlGvi  227 (350)
T d1rdqe_         150 IVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIIL-SKGYNKAVDWWALGVL  227 (350)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECT-TSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHT-TCCBCTHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCEecCcCCHHHcccCC-CCCEEeeeceeeeecccccccccCccccCCHHHHc-CCCCCccccccchhHH
Confidence            999999999999999999999999998 899999999999877543      37899999765 4568999999999999


Q ss_pred             HHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCC----
Q 005986          313 MAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRI----  388 (666)
Q Consensus       313 LyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp----  388 (666)
                      +|||++|++||.+            .+...+..   .+....       ...+..+++++.+||++||++||.+|+    
T Consensus       228 lyemltG~~Pf~~------------~~~~~~~~---~i~~~~-------~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r  285 (350)
T d1rdqe_         228 IYEMAAGYPPFFA------------DQPIQIYE---KIVSGK-------VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLK  285 (350)
T ss_dssp             HHHHHHSSCSSCC------------SSHHHHHH---HHHHCC-------CCCCTTCCHHHHHHHHHHSCSCTTTCTTSST
T ss_pred             HHHHHhCCCCCCC------------cCHHHHHH---HHhcCC-------CCCCccCCHHHHHHHHHHhhhCHHhcccccc
Confidence            9999999999852            33333322   233222       223456899999999999999999995    


Q ss_pred             -CHHHHhcCCCCCCCCC
Q 005986          389 -SCLDALRHPFLCGPRW  404 (666)
Q Consensus       389 -Ta~elL~HP~f~~~~~  404 (666)
                       |++|+++||||++++|
T Consensus       286 ~t~~ell~Hp~f~~~~~  302 (350)
T d1rdqe_         286 NGVNDIKNHKWFATTDW  302 (350)
T ss_dssp             TTTHHHHTSGGGTTCCH
T ss_pred             ccHHHHHcCccccCCCH
Confidence             9999999999999885


No 19 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=3.2e-52  Score=438.29  Aligned_cols=247  Identities=20%  Similarity=0.201  Sum_probs=204.5

Q ss_pred             CeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch-----hhHHHHHHHHHHHHHhhhccCCCCCcceEE
Q 005986           87 DFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV-----QAQRRGRRAIEVLKKLVRRRLMYHSYSMQV  161 (666)
Q Consensus        87 ~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~-----~~~~~~~rEi~iL~~L~~~~~~~HpnIVkl  161 (666)
                      .|++++.||+|+||    +||+|++..     +++.||||++...     ...+.+.+|+++|++++      |||||++
T Consensus        16 ~y~~l~~lG~G~fg----~Vy~a~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~------HpnIv~~   80 (309)
T d1u5ra_          16 LFSDLREIGHGSFG----AVYFARDVR-----NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR------HPNTIQY   80 (309)
T ss_dssp             HEEEEEEEEECSSS----EEEEEEETT-----TTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCC------CTTBCCE
T ss_pred             hcEeeEEEecCCCe----EEEEEEECC-----CCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCC------CCCEeeE
Confidence            49999999999999    999999998     8999999999742     22245689999999997      9999999


Q ss_pred             EEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHH
Q 005986          162 HGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLI  241 (666)
Q Consensus       162 ~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~  241 (666)
                      ++++.     +.+.+|||||||.+|+|..++...+         .+++                    ..++.|++||+.
T Consensus        81 ~~~~~-----~~~~~~iv~E~~~~g~l~~~~~~~~---------~l~e--------------------~~~~~i~~qi~~  126 (309)
T d1u5ra_          81 RGCYL-----REHTAWLVMEYCLGSASDLLEVHKK---------PLQE--------------------VEIAAVTHGALQ  126 (309)
T ss_dssp             EEEEE-----ETTEEEEEEECCSEEHHHHHHHHTS---------CCCH--------------------HHHHHHHHHHHH
T ss_pred             EEEEE-----ECCEEEEEEEecCCCchHHHHHhCC---------CCCH--------------------HHHHHHHHHHHH
Confidence            99999     7789999999999999987776543         3554                    457889999999


Q ss_pred             HHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC-----CCCCCCcccccc--ccCCCchhhhhhHHHHHH
Q 005986          242 GVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED-----GPNNSSPDSNMD--RRQMMIAFDMRCVGFMMA  314 (666)
Q Consensus       242 aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~-----~~~y~APEvl~~--~~~ys~~sDIWSLGviLy  314 (666)
                      ||.|||++|||||||||+|||++. ++.+||+|||+|......     .+.|||||++.+  ...|+.++|||||||++|
T Consensus       127 aL~yLH~~~iiHrDiKp~NILl~~-~~~~Kl~DFG~a~~~~~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvily  205 (309)
T d1u5ra_         127 GLAYLHSHNMIHRDVKAGNILLSE-PGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI  205 (309)
T ss_dssp             HHHHHHHTTCBCCCCSGGGEEEET-TTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHH
T ss_pred             HHHHHHhCCEeccCCCcceEEECC-CCCEEEeecccccccCCCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHH
Confidence            999999999999999999999998 999999999999866543     378999998764  356999999999999999


Q ss_pred             HHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCCHHHHh
Q 005986          315 KMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCLDAL  394 (666)
Q Consensus       315 emltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpTa~elL  394 (666)
                      ||++|.+||.+            .....   .+..+.....+     ......+++++++||.+||++||++|||++|+|
T Consensus       206 el~~g~~Pf~~------------~~~~~---~~~~i~~~~~~-----~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell  265 (309)
T d1u5ra_         206 ELAERKPPLFN------------MNAMS---ALYHIAQNESP-----ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL  265 (309)
T ss_dssp             HHHHSSCTTTT------------SCHHH---HHHHHHHSCCC-----CCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             HHHHCCCCCCC------------CCHHH---HHHHHHhCCCC-----CCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHH
Confidence            99999999853            22211   12222222221     112345789999999999999999999999999


Q ss_pred             cCCCCCCCC
Q 005986          395 RHPFLCGPR  403 (666)
Q Consensus       395 ~HP~f~~~~  403 (666)
                      +||||....
T Consensus       266 ~Hp~~~~~~  274 (309)
T d1u5ra_         266 KHRFVLRER  274 (309)
T ss_dssp             TCHHHHSCC
T ss_pred             hCHHhcCCC
Confidence            999997643


No 20 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.3e-51  Score=429.20  Aligned_cols=272  Identities=24%  Similarity=0.301  Sum_probs=207.1

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh----hHHHHHHHHHHHHHhhhccCCCCCcceE
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ----AQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~----~~~~~~rEi~iL~~L~~~~~~~HpnIVk  160 (666)
                      +++|++++.||+|+||    +||+|++..     +++.||||+++...    ....+.+|+++|++++      |||||+
T Consensus         1 ~d~Y~~~~~lG~G~fg----~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~------Hp~Iv~   65 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYG----VVYKARNKL-----TGEVVALKKIRLDTETEGVPSTAIREISLLKELN------HPNIVK   65 (298)
T ss_dssp             CTTEEEEEEEEECSSS----EEEEEEETT-----TCCEEEEEEEC-------CCHHHHHHHHHHTTCC------CTTBCC
T ss_pred             CCCCEeccEEecCcCe----EEEEEEECC-----CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCC------CCcEEE
Confidence            5899999999999999    999999988     89999999996532    2356789999999996      999999


Q ss_pred             EEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHH
Q 005986          161 VHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLL  240 (666)
Q Consensus       161 l~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl  240 (666)
                      ++++|.     +.+.+|+|||||.+ ++.+++....       ...++|                    ..++.++.||+
T Consensus        66 ~~~~~~-----~~~~~~iv~e~~~~-~~~~~~~~~~-------~~~l~e--------------------~~~~~~~~qil  112 (298)
T d1gz8a_          66 LLDVIH-----TENKLYLVFEFLHQ-DLKKFMDASA-------LTGIPL--------------------PLIKSYLFQLL  112 (298)
T ss_dssp             EEEEEE-----ETTEEEEEEECCSE-EHHHHHHHTT-------TTCCCH--------------------HHHHHHHHHHH
T ss_pred             eccccc-----cccceeEEEeecCC-chhhhhhhhc-------ccCCCH--------------------HHHHHHHHHHH
Confidence            999999     77899999999987 6666554431       113444                    56899999999


Q ss_pred             HHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccC---------CCCCCCCccccccccCCCchhhhhhHHH
Q 005986          241 IGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE---------DGPNNSSPDSNMDRRQMMIAFDMRCVGF  311 (666)
Q Consensus       241 ~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~---------~~~~y~APEvl~~~~~ys~~sDIWSLGv  311 (666)
                      .||+|||++|||||||||+|||++. ++.+||+|||+|+....         +.+.|+|||++.....++.++|||||||
T Consensus       113 ~~L~yLH~~~IiHrDiKpeNIl~~~-~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGv  191 (298)
T d1gz8a_         113 QGLAFCHSHRVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC  191 (298)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEECT-TSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred             HHHHHhhcCCEEccccCchheeecc-cCcceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccch
Confidence            9999999999999999999999998 89999999999976543         2388999998777777899999999999


Q ss_pred             HHHHHHhCCCCChhh---hhhhhhccccCCChhhHHHHHHHHhc---cCCCC-CCCCcccccCCcHHHHHHHHHhhhcCC
Q 005986          312 MMAKMVLRELMDPLI---FTKFKSFLTKGIDPSCLREFLLQVLN---RNSSS-GNTGFQILDRNWGAGWNLLSLLLATKP  384 (666)
Q Consensus       312 iLyemltG~~PF~~~---~~~~~~~~~~g~~~~~l~~~~~~~~~---~~~~~-~~~~~~~~~~~s~~~~dLI~~mL~~DP  384 (666)
                      ++|+|++|++||.+.   .....++...+.+.+...........   ..+.. ..........+++++++||.+||++||
T Consensus       192 ily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP  271 (298)
T d1gz8a_         192 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDP  271 (298)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSST
T ss_pred             hhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCCh
Confidence            999999999999632   11112221112111110000000000   00000 000012234678999999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCCCCC
Q 005986          385 SKRISCLDALRHPFLCGPRWR  405 (666)
Q Consensus       385 ~~RpTa~elL~HP~f~~~~~~  405 (666)
                      ++|||++|+|+||||+++..+
T Consensus       272 ~~R~t~~ell~H~ff~~~~~p  292 (298)
T d1gz8a_         272 NKRISAKAALAHPFFQDVTKP  292 (298)
T ss_dssp             TTSCCHHHHHTSGGGTTCCCC
T ss_pred             hHCcCHHHHhCCHhhccCCCC
Confidence            999999999999999998754


No 21 
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-51  Score=436.38  Aligned_cols=247  Identities=20%  Similarity=0.278  Sum_probs=207.1

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh-----hHHHHHHHHHHHH-HhhhccCCCCCcc
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-----AQRRGRRAIEVLK-KLVRRRLMYHSYS  158 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~-----~~~~~~rEi~iL~-~L~~~~~~~HpnI  158 (666)
                      +++|++++.||+|+||    +||+|+++.     +++.||||++++..     ..+...+|+.++. .++      ||||
T Consensus         1 iddy~i~~~iG~G~fg----~Vy~~~~~~-----t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~------hp~I   65 (320)
T d1xjda_           1 IEDFILHKMLGKGSFG----KVFLAEFKK-----TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE------HPFL   65 (320)
T ss_dssp             CTTEEEEEEEEECSSS----EEEEEEETT-----TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTT------CTTB
T ss_pred             CCCeEEeeEEecCCCc----EEEEEEECC-----CCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCC------CCcE
Confidence            5899999999999999    999999998     89999999997532     2244577877776 454      9999


Q ss_pred             eEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHH
Q 005986          159 MQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRD  238 (666)
Q Consensus       159 Vkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~Q  238 (666)
                      |++++++.     +++.+|||||||++|+|.+++...+         .++|                    ..++.++.|
T Consensus        66 v~~~~~~~-----~~~~~yivmEy~~~g~L~~~i~~~~---------~~~e--------------------~~~~~~~~q  111 (320)
T d1xjda_          66 THMFCTFQ-----TKENLFFVMEYLNGGDLMYHIQSCH---------KFDL--------------------SRATFYAAE  111 (320)
T ss_dssp             CCEEEEEE-----CSSEEEEEEECCTTCBHHHHHHHHS---------SCCH--------------------HHHHHHHHH
T ss_pred             EEEEEEEc-----cCCceeEEEeecCCCcHHHHhhccC---------CCCH--------------------HHHHHHHHH
Confidence            99999999     8899999999999999999998754         3444                    457889999


Q ss_pred             HHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC---------CCCCCCccccccccCCCchhhhhhH
Q 005986          239 LLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED---------GPNNSSPDSNMDRRQMMIAFDMRCV  309 (666)
Q Consensus       239 Il~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~---------~~~y~APEvl~~~~~ys~~sDIWSL  309 (666)
                      |+.||+|||++||+||||||+|||++. ++.+||+|||+|+.....         .+.|+|||++. ...|+.++|||||
T Consensus       112 i~~al~ylH~~~iiHrDikp~NiL~~~-~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSl  189 (320)
T d1xjda_         112 IILGLQFLHSKGIVYRDLKLDNILLDK-DGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILL-GQKYNHSVDWWSF  189 (320)
T ss_dssp             HHHHHHHHHHTTCBCCCCCGGGEEECT-TSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHT-TCCBCTHHHHHHH
T ss_pred             HHHHHHHHHhCCeeeccCcccceeecC-CCceeccccchhhhcccccccccccCCCCCcCCHHHHc-CCCCCchhhhhhh
Confidence            999999999999999999999999998 999999999999865432         26799999665 4569999999999


Q ss_pred             HHHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCC
Q 005986          310 GFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRIS  389 (666)
Q Consensus       310 GviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpT  389 (666)
                      ||++|||++|++||.            |.+...+...+.   ...       ...+..+++++++||.+||++||++|||
T Consensus       190 GvilyemltG~~PF~------------~~~~~~~~~~i~---~~~-------~~~p~~~s~~~~dli~~~L~~dP~~R~s  247 (320)
T d1xjda_         190 GVLLYEMLIGQSPFH------------GQDEEELFHSIR---MDN-------PFYPRWLEKEAKDLLVKLFVREPEKRLG  247 (320)
T ss_dssp             HHHHHHHHHSSCSSC------------CSSHHHHHHHHH---HCC-------CCCCTTSCHHHHHHHHHHSCSSGGGSBT
T ss_pred             hHHHHHHHhCCCCCC------------CCCHHHHHHHHH---cCC-------CCCCccCCHHHHHHHHHhcccCCCCCcC
Confidence            999999999999985            334443333332   221       1234568999999999999999999999


Q ss_pred             HH-HHhcCCCCCCCCC
Q 005986          390 CL-DALRHPFLCGPRW  404 (666)
Q Consensus       390 a~-elL~HP~f~~~~~  404 (666)
                      +. ++++||||++.+|
T Consensus       248 ~~~~l~~hpff~~~~~  263 (320)
T d1xjda_         248 VRGDIRQHPLFREINW  263 (320)
T ss_dssp             TBSCGGGSGGGTTCCH
T ss_pred             HHHHHHhCchhccCCH
Confidence            95 8999999999875


No 22 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.1e-52  Score=439.03  Aligned_cols=251  Identities=16%  Similarity=0.250  Sum_probs=208.4

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchhh-HHHHHHHHHHHHHhhhccCCCCCcceEEEE
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQA-QRRGRRAIEVLKKLVRRRLMYHSYSMQVHG  163 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~~-~~~~~rEi~iL~~L~~~~~~~HpnIVkl~~  163 (666)
                      .++|++++.||+|+||    +||+|+++.     +++.||||+++.... ...+.+|+++|+.++      |||||++++
T Consensus         4 ~~rY~i~~~lG~G~fg----~Vy~~~~~~-----~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~------HpnIv~~~~   68 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFG----IVHRCVETS-----SKKTYMAKFVKVKGTDQVLVKKEISILNIAR------HRNILHLHE   68 (321)
T ss_dssp             TTTEEEEEEEEECSSE----EEEEEEETT-----TTEEEEEEEECCCTHHHHHHHHHHHHHHHSC------CTTBCCEEE
T ss_pred             ccceEEEEEEecCCCe----EEEEEEECC-----CCcEEEEEEEcCCcccHHHHHHHHHHHHhCC------CCCCCeEEE
Confidence            4789999999999999    999999998     899999999986433 345689999999997      999999999


Q ss_pred             EEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHHH
Q 005986          164 YVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIGV  243 (666)
Q Consensus       164 ~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~aL  243 (666)
                      +|+     +.+.+|||||||+||+|.++|...+        ..++|                    ..++.|+.||+.||
T Consensus        69 ~~~-----~~~~~~lvmE~~~gg~L~~~i~~~~--------~~l~e--------------------~~~~~i~~qi~~al  115 (321)
T d1tkia_          69 SFE-----SMEELVMIFEFISGLDIFERINTSA--------FELNE--------------------REIVSYVHQVCEAL  115 (321)
T ss_dssp             EEE-----ETTEEEEEECCCCCCBHHHHHTSSS--------CCCCH--------------------HHHHHHHHHHHHHH
T ss_pred             EEE-----ECCEEEEEEecCCCCcHHHHHHhcC--------CCCCH--------------------HHHHHHHHHHHHHH
Confidence            999     7789999999999999999997653        13555                    45788999999999


Q ss_pred             HHHHhCCCCcCCCCCCceEEcCC-CCceeeecccccccccCCC--------CCCCCccccccccCCCchhhhhhHHHHHH
Q 005986          244 NYLHSHGLAHTELRLENVHISPV-DRHIKVGILGNAADFYEDG--------PNNSSPDSNMDRRQMMIAFDMRCVGFMMA  314 (666)
Q Consensus       244 ~yLHs~gIvHRDLKPeNILi~~~-~g~vKL~DFGlA~~~~~~~--------~~y~APEvl~~~~~ys~~sDIWSLGviLy  314 (666)
                      +|||++||+||||||+|||++.+ .+.+||+|||+++......        +.|+|||.+ ....|+.++|||||||++|
T Consensus       116 ~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~-~~~~~~~~~DiWSlGvily  194 (321)
T d1tkia_         116 QFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVH-QHDVVSTATDMWSLGTLVY  194 (321)
T ss_dssp             HHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHH-TTCEECHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCcccccccccccccchhc-cCCCCCchhhcccHHHHHH
Confidence            99999999999999999999862 4589999999998765543        789999955 4556999999999999999


Q ss_pred             HHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCCHHHHh
Q 005986          315 KMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCLDAL  394 (666)
Q Consensus       315 emltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpTa~elL  394 (666)
                      +|++|.+||..            .+....   +..+......   .....+..+++++++||.+||++||++|||++|+|
T Consensus       195 ~ll~G~~Pf~~------------~~~~~~---~~~i~~~~~~---~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil  256 (321)
T d1tkia_         195 VLLSGINPFLA------------ETNQQI---IENIMNAEYT---FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEAL  256 (321)
T ss_dssp             HHHHSSCTTCC------------SSHHHH---HHHHHHTCCC---CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred             HHHhCCCCCCC------------CCHHHH---HHHHHhCCCC---CChhhccCCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            99999999853            233222   2223222111   11233456899999999999999999999999999


Q ss_pred             cCCCCCCC
Q 005986          395 RHPFLCGP  402 (666)
Q Consensus       395 ~HP~f~~~  402 (666)
                      +||||++.
T Consensus       257 ~hp~~~~~  264 (321)
T d1tkia_         257 QHPWLKQK  264 (321)
T ss_dssp             HSHHHHSC
T ss_pred             cCHhhccC
Confidence            99999763


No 23 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.4e-51  Score=436.40  Aligned_cols=259  Identities=18%  Similarity=0.213  Sum_probs=202.4

Q ss_pred             ccCCeEEEe-EeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchhhHHHHHHHHHHHHHhhhccCCCCCcceEEE
Q 005986           84 NMGDFKILD-RVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (666)
Q Consensus        84 ~~~~Y~i~~-~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~  162 (666)
                      .+++|+++. .||+|+||    +||+|++..     +++.||||+++..   ....+|++++.++.     +|||||+++
T Consensus         9 i~~~y~i~~~~lG~G~fg----~Vy~a~~~~-----~~~~vAiK~i~~~---~~~~~E~~~~~~~~-----~hpnIv~l~   71 (335)
T d2ozaa1           9 IIDDYKVTSQVLGLGING----KVLQIFNKR-----TQEKFALKMLQDC---PKARREVELHWRAS-----QCPHIVRIV   71 (335)
T ss_dssp             GGGTEEEEEEEEEECSSC----EEEEEEETT-----TCCEEEEEEEECS---HHHHHHHHHHHHHT-----TSTTBCCEE
T ss_pred             cccCEEEeeEEeeeccCe----EEEEEEECC-----CCCEEEEEEECCc---HHHHHHHHHHHHhc-----CCCCCCeEE
Confidence            368999875 59999999    999999988     8999999999643   45678999987764     599999999


Q ss_pred             EEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHH
Q 005986          163 GYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIG  242 (666)
Q Consensus       163 ~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~a  242 (666)
                      ++|++. ...+..+|||||||+||||.++|.+++.       ..|+|                    ..++.|++||+.|
T Consensus        72 ~~~~~~-~~~~~~~~ivmEy~~gg~L~~~i~~~~~-------~~l~e--------------------~~~~~i~~qi~~a  123 (335)
T d2ozaa1          72 DVYENL-YAGRKCLLIVMECLDGGELFSRIQDRGD-------QAFTE--------------------REASEIMKSIGEA  123 (335)
T ss_dssp             EEEEEE-ETTEEEEEEEEECCCSEEHHHHHHSCSC-------CCEEH--------------------HHHHHHHHHHHHH
T ss_pred             EEEeec-ccCCCEEEEEEECCCCCcHHHHHHhcCC-------CCcCH--------------------HHHHHHHHHHHHH
Confidence            999731 1145789999999999999999987431       13444                    5579999999999


Q ss_pred             HHHHHhCCCCcCCCCCCceEEcCC--CCceeeecccccccccCC--------CCCCCCccccccccCCCchhhhhhHHHH
Q 005986          243 VNYLHSHGLAHTELRLENVHISPV--DRHIKVGILGNAADFYED--------GPNNSSPDSNMDRRQMMIAFDMRCVGFM  312 (666)
Q Consensus       243 L~yLHs~gIvHRDLKPeNILi~~~--~g~vKL~DFGlA~~~~~~--------~~~y~APEvl~~~~~ys~~sDIWSLGvi  312 (666)
                      |+|||++||+||||||+|||++..  .+.+||+|||+|+.....        .+.|+|||++ ....|+.++|||||||+
T Consensus       124 l~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~-~~~~y~~~~DiwSlGvi  202 (335)
T d2ozaa1         124 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVI  202 (335)
T ss_dssp             HHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCC-CGGGGSHHHHHHHHHHH
T ss_pred             HHHHHHcCCccccccccccccccccccccccccccceeeeccCCCccccccCCcccCCcHHH-cCCCCCHHHHHHhhchh
Confidence            999999999999999999999862  467999999999865443        3889999955 45569999999999999


Q ss_pred             HHHHHhCCCCChhhhhhhhhccccCCChhhHHHHH-HHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCCHH
Q 005986          313 MAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFL-LQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCL  391 (666)
Q Consensus       313 LyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpTa~  391 (666)
                      +|+|++|++||.+..            .......+ ..+.....   ....+....+++++++||.+||++||++|||+.
T Consensus       203 ly~lltg~~Pf~~~~------------~~~~~~~~~~~i~~~~~---~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~  267 (335)
T d2ozaa1         203 MYILLCGYPPFYSNH------------GLAISPGMKTRIRMGQY---EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT  267 (335)
T ss_dssp             HHHHTTSSCSCEETT------------CC--------CCCSCSS---SCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             HHHHhhCCCCCCCCC------------HHHHHHHHHHHHhcCCC---CCCCcccccCCHHHHHHHHHHccCChhHCcCHH
Confidence            999999999996421            11111111 11110000   001122346789999999999999999999999


Q ss_pred             HHhcCCCCCCCC
Q 005986          392 DALRHPFLCGPR  403 (666)
Q Consensus       392 elL~HP~f~~~~  403 (666)
                      |+|+||||.+..
T Consensus       268 eil~hp~~~~~~  279 (335)
T d2ozaa1         268 EFMNHPWIMQST  279 (335)
T ss_dssp             HHHHSHHHHTTT
T ss_pred             HHHcCHHhhCCC
Confidence            999999997644


No 24 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=8.2e-51  Score=421.98  Aligned_cols=266  Identities=21%  Similarity=0.250  Sum_probs=206.1

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh----hHHHHHHHHHHHHHhhhccCCCCCcceE
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ----AQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~----~~~~~~rEi~iL~~L~~~~~~~HpnIVk  160 (666)
                      +++|+++++||+|+||    +||+|+++      +++.||||+++...    ..+.+.+|+.+|++++      |||||+
T Consensus         1 ~~~Y~~~~~iG~G~fg----~Vy~~~~~------~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~------hpnIv~   64 (286)
T d1ob3a_           1 MEKYHGLEKIGEGTYG----VVYKAQNN------YGETFALKKIRLEKEDEGIPSTTIREISILKELK------HSNIVK   64 (286)
T ss_dssp             CCSEEEEEEEEEETTE----EEEEEEET------TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCC------CTTBCC
T ss_pred             CCCceeccEEecCCCc----EEEEEEeC------CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCC------CCcEEe
Confidence            5899999999999999    99999986      58999999996532    2356789999999997      999999


Q ss_pred             EEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHH
Q 005986          161 VHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLL  240 (666)
Q Consensus       161 l~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl  240 (666)
                      +++++.     +.+..|++|||+.++.+..+....+         .+++                    ..++.++.||+
T Consensus        65 ~~~~~~-----~~~~~~i~~e~~~~~~~~~~~~~~~---------~l~~--------------------~~~~~i~~qi~  110 (286)
T d1ob3a_          65 LYDVIH-----TKKRLVLVFEHLDQDLKKLLDVCEG---------GLES--------------------VTAKSFLLQLL  110 (286)
T ss_dssp             EEEEEE-----CSSCEEEEEECCSEEHHHHHHTSTT---------CCCH--------------------HHHHHHHHHHH
T ss_pred             eeeecc-----cCCceeEEEEeehhhhHHHHHhhcC---------Ccch--------------------hhhHHHHHHHH
Confidence            999999     7889999999999976666655443         3454                    55789999999


Q ss_pred             HHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC---------CCCCCCccccccccCCCchhhhhhHHH
Q 005986          241 IGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED---------GPNNSSPDSNMDRRQMMIAFDMRCVGF  311 (666)
Q Consensus       241 ~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~---------~~~y~APEvl~~~~~ys~~sDIWSLGv  311 (666)
                      .||+|||++|||||||||+|||++. ++.+||+|||+|......         .+.|+|||.+.+...++.++|||||||
T Consensus       111 ~~L~~LH~~~IvHrDiKp~NIll~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv  189 (286)
T d1ob3a_         111 NGIAYCHDRRVLHRDLKPQNLLINR-EGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGC  189 (286)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEECT-TSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHH
T ss_pred             HHHHHhccCcEEecCCCCceeeEcC-CCCEEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCc
Confidence            9999999999999999999999998 999999999999765432         278999998888888999999999999


Q ss_pred             HHHHHHhCCCCChhh---hhhhhhccccCCChhhHHHHHHHHhc----cCCCCCCCCcccccCCcHHHHHHHHHhhhcCC
Q 005986          312 MMAKMVLRELMDPLI---FTKFKSFLTKGIDPSCLREFLLQVLN----RNSSSGNTGFQILDRNWGAGWNLLSLLLATKP  384 (666)
Q Consensus       312 iLyemltG~~PF~~~---~~~~~~~~~~g~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP  384 (666)
                      ++|||++|++||.+.   .....++...|.+.............    ................+++++|||++||++||
T Consensus       190 ~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP  269 (286)
T d1ob3a_         190 IFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDP  269 (286)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSST
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCCh
Confidence            999999999999632   11122222222211100000000000    00000111123345678999999999999999


Q ss_pred             CCCCCHHHHhcCCCCCC
Q 005986          385 SKRISCLDALRHPFLCG  401 (666)
Q Consensus       385 ~~RpTa~elL~HP~f~~  401 (666)
                      ++|||++|+|+||||++
T Consensus       270 ~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         270 NQRITAKQALEHAYFKE  286 (286)
T ss_dssp             TTSCCHHHHHTSGGGGC
T ss_pred             hHCcCHHHHhcCcccCc
Confidence            99999999999999974


No 25 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=100.00  E-value=1.1e-50  Score=429.16  Aligned_cols=268  Identities=21%  Similarity=0.253  Sum_probs=208.7

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchhhHHHHHHHHHHHHHhhhccCCCCCcceEEEEE
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQVHGY  164 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~~~  164 (666)
                      .++|+++++||+|+||    +||+|+++.     +++.||||+++... .+.+.+|+++|+.++     +||||++++++
T Consensus        34 ~d~y~i~~~LG~G~fg----~V~~a~~~~-----~~~~vAiK~i~~~~-~~~~~~Ei~il~~l~-----~hpnIv~~~~~   98 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYS----EVFEAINIT-----NNEKVVVKILKPVK-KKKIKREIKILENLR-----GGPNIITLADI   98 (328)
T ss_dssp             GGGEEEEEEEEECSSE----EEEEEEETT-----TTEEEEEEEECSSC-HHHHHHHHHHHHHHT-----TSTTBCCEEEE
T ss_pred             CcCeEEEEEEecCcCe----EEEEEEECC-----CCCEEEEEEECHHH-HHHHHHHHHHHHhcc-----CCCCCcEEEEE
Confidence            4789999999999999    999999988     89999999997643 456789999999997     69999999999


Q ss_pred             EEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHHHH
Q 005986          165 VSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIGVN  244 (666)
Q Consensus       165 ~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~aL~  244 (666)
                      |...   ....+++|||||++|+|.++.+            .++|                    ..++.+++||+.||+
T Consensus        99 ~~~~---~~~~~~~v~e~~~~~~L~~~~~------------~l~e--------------------~~i~~i~~qil~aL~  143 (328)
T d3bqca1          99 VKDP---VSRTPALVFEHVNNTDFKQLYQ------------TLTD--------------------YDIRFYMYEILKALD  143 (328)
T ss_dssp             EECT---TTCSEEEEEECCCSCBGGGTTT------------SCCH--------------------HHHHHHHHHHHHHHH
T ss_pred             EEec---CCCceeEEEeecCCCcHHHHhc------------CCCH--------------------HHHHHHHHHHHHHHH
Confidence            9842   5578999999999999987643            2554                    457889999999999


Q ss_pred             HHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCCC--------CCCCCccccccccCCCchhhhhhHHHHHHHH
Q 005986          245 YLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG--------PNNSSPDSNMDRRQMMIAFDMRCVGFMMAKM  316 (666)
Q Consensus       245 yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~~--------~~y~APEvl~~~~~ys~~sDIWSLGviLyem  316 (666)
                      |||++|||||||||+|||++.+++.+||+|||+|+......        +.|+|||.+.+...|+.++||||+||++|||
T Consensus       144 ~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~  223 (328)
T d3bqca1         144 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM  223 (328)
T ss_dssp             HHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHH
T ss_pred             HHhhcccccccccccceEEcCCCCeeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHh
Confidence            99999999999999999999746679999999998765432        6799999888888899999999999999999


Q ss_pred             HhCCCCChhh----hhhhhhccccCCChhhHHHHHHHHhcc-----------CCCCCC---CCcccccCCcHHHHHHHHH
Q 005986          317 VLRELMDPLI----FTKFKSFLTKGIDPSCLREFLLQVLNR-----------NSSSGN---TGFQILDRNWGAGWNLLSL  378 (666)
Q Consensus       317 ltG~~PF~~~----~~~~~~~~~~g~~~~~l~~~~~~~~~~-----------~~~~~~---~~~~~~~~~s~~~~dLI~~  378 (666)
                      ++|+.||...    .+...+....|.+  ............           ......   ........++++++|||++
T Consensus       224 ~~g~~pf~~~~~~~~~~~~i~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~  301 (328)
T d3bqca1         224 IFRKEPFFHGHDNYDQLVRIAKVLGTE--DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK  301 (328)
T ss_dssp             HHTCSSSSCCSSHHHHHHHHHHHHCHH--HHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHH
T ss_pred             ccCCCCCCCCchhHHHHHHHHHHHCCc--hhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHH
Confidence            9999998631    1111111112211  011111110000           000000   0111234578999999999


Q ss_pred             hhhcCCCCCCCHHHHhcCCCCCCCCC
Q 005986          379 LLATKPSKRISCLDALRHPFLCGPRW  404 (666)
Q Consensus       379 mL~~DP~~RpTa~elL~HP~f~~~~~  404 (666)
                      ||++||++||||+|+|+||||+++.|
T Consensus       302 mL~~dP~~R~ta~e~L~Hp~F~~v~~  327 (328)
T d3bqca1         302 LLRYDHQSRLTAREAMEHPYFYTVVK  327 (328)
T ss_dssp             HSCSSGGGSCCHHHHHTSGGGTTSCC
T ss_pred             HccCChhHCcCHHHHhcCcccCCCCC
Confidence            99999999999999999999999876


No 26 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.4e-51  Score=423.93  Aligned_cols=243  Identities=19%  Similarity=0.208  Sum_probs=203.9

Q ss_pred             CCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchhh--------HHHHHHHHHHHHHhhhccCCCCCc
Q 005986           86 GDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQA--------QRRGRRAIEVLKKLVRRRLMYHSY  157 (666)
Q Consensus        86 ~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~~--------~~~~~rEi~iL~~L~~~~~~~Hpn  157 (666)
                      ++|++.+.||+|+||    +||+|++..     +++.||||++.+...        ...+.+|+.+|++++.    .|||
T Consensus         4 ~~Y~i~~~lG~G~fg----~Vy~a~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~----~h~n   70 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFG----SVYSGIRVS-----DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS----GFSG   70 (273)
T ss_dssp             TTEEEEEEEEEETTE----EEEEEEETT-----TCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS----SSCS
T ss_pred             CeEEEeEEEeeCCCe----EEEEEEECC-----CCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhcc----CCCC
Confidence            689999999999999    999999998     899999999975321        1234689999999962    3899


Q ss_pred             ceEEEEEEEecccCCCceEEEEEecCCC-CChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHH
Q 005986          158 SMQVHGYVSSHTTSGRSLFTLVHGYHGS-FSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLM  236 (666)
Q Consensus       158 IVkl~~~~~~~~~~~~~~~~LVmEy~~~-GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~  236 (666)
                      ||++++++.     +.+.+|+||||+.+ ++|.+++.+.+         .++|                    ..++.|+
T Consensus        71 Iv~~~~~~~-----~~~~~~lv~e~~~~~~~l~~~~~~~~---------~l~e--------------------~~~~~~~  116 (273)
T d1xwsa_          71 VIRLLDWFE-----RPDSFVLILERPEPVQDLFDFITERG---------ALQE--------------------ELARSFF  116 (273)
T ss_dssp             BCCEEEEEE-----CSSEEEEEEECCSSEEEHHHHHHHHC---------SCCH--------------------HHHHHHH
T ss_pred             ccEEEEEEe-----eCCeEEEEEEeccCcchHHHHHhccC---------CCCH--------------------HHHHHHH
Confidence            999999999     78899999999976 68888887654         4554                    4578899


Q ss_pred             HHHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC-------CCCCCCccccccccCCCchhhhhhH
Q 005986          237 RDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED-------GPNNSSPDSNMDRRQMMIAFDMRCV  309 (666)
Q Consensus       237 ~QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~-------~~~y~APEvl~~~~~ys~~sDIWSL  309 (666)
                      .||+.||+|||++||+||||||+|||++.+++.+||+|||+|+.....       .+.|+|||++.+...++.++|||||
T Consensus       117 ~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSl  196 (273)
T d1xwsa_         117 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL  196 (273)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceecccccccccccCCCcCCHHHHcCCCCCCcccccccc
Confidence            999999999999999999999999999974689999999999765433       3779999987777767889999999


Q ss_pred             HHHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCC
Q 005986          310 GFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRIS  389 (666)
Q Consensus       310 GviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpT  389 (666)
                      ||++|||++|++||.....                     +...       .......+++++++||.+||++||++|||
T Consensus       197 Gvilyell~g~~Pf~~~~~---------------------i~~~-------~~~~~~~~s~~~~~li~~~L~~dp~~R~s  248 (273)
T d1xwsa_         197 GILLYDMVCGDIPFEHDEE---------------------IIRG-------QVFFRQRVSSECQHLIRWCLALRPSDRPT  248 (273)
T ss_dssp             HHHHHHHHHSSCSCCSHHH---------------------HHHC-------CCCCSSCCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             eeeehhHhhCCCCCCCchH---------------------Hhhc-------ccCCCCCCCHHHHHHHHHHccCCHhHCcC
Confidence            9999999999999863211                     1111       11234568899999999999999999999


Q ss_pred             HHHHhcCCCCCCCC
Q 005986          390 CLDALRHPFLCGPR  403 (666)
Q Consensus       390 a~elL~HP~f~~~~  403 (666)
                      ++|+|+||||++..
T Consensus       249 ~~eil~hp~~~~~~  262 (273)
T d1xwsa_         249 FEEIQNHPWMQDVL  262 (273)
T ss_dssp             HHHHHTSGGGSSCC
T ss_pred             HHHHhcCHhhCCCC
Confidence            99999999998854


No 27 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.1e-50  Score=420.99  Aligned_cols=266  Identities=21%  Similarity=0.234  Sum_probs=204.4

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh----hHHHHHHHHHHHHHhhhccCCCCCcceE
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ----AQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~----~~~~~~rEi~iL~~L~~~~~~~HpnIVk  160 (666)
                      .++|+++++||+|+||    +||+|++..+    +++.||||+++...    ......+|+.+|+.|+   ..+||||++
T Consensus         6 ~~~Y~i~~~LG~G~fg----~V~~a~~~~~----~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~---~~~HpnIv~   74 (305)
T d1blxa_           6 DQQYECVAEIGEGAYG----KVFKARDLKN----GGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE---TFEHPNVVR   74 (305)
T ss_dssp             GGTEEEEEEEEEETTE----EEEEEEETTT----TTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHH---HTCCTTBCC
T ss_pred             cCCEEEEEEEecccCe----EEEEEEEECC----CCEEEEEEEEehhhccchHHHHHHHHHHHHHHHh---hcCCCCcce
Confidence            3789999999999999    9999999762    36789999996422    2234578999998884   225999999


Q ss_pred             EEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHH
Q 005986          161 VHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLL  240 (666)
Q Consensus       161 l~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl  240 (666)
                      ++++|..........+|++||||++|++........        ..++                    ...++.+++||+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--------~~~~--------------------~~~~~~~~~qi~  126 (305)
T d1blxa_          75 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPE--------PGVP--------------------TETIKDMMFQLL  126 (305)
T ss_dssp             EEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCT--------TCSC--------------------HHHHHHHHHHHH
T ss_pred             eeeeecccccccCceEEEEEEeccCCchhhhhhccC--------CCCC--------------------HHHHHHHHHHHH
Confidence            999997544446678999999999966654443321        1233                    356789999999


Q ss_pred             HHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccC--------CCCCCCCccccccccCCCchhhhhhHHHH
Q 005986          241 IGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE--------DGPNNSSPDSNMDRRQMMIAFDMRCVGFM  312 (666)
Q Consensus       241 ~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~--------~~~~y~APEvl~~~~~ys~~sDIWSLGvi  312 (666)
                      .||+|||++|||||||||+|||++. ++.+||+|||+++....        +.+.|+|||++. ...|+.++|||||||+
T Consensus       127 ~aL~yLH~~~ivHrDiKp~NILi~~-~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~-~~~y~~~~DiwSlG~i  204 (305)
T d1blxa_         127 RGLDFLHSHRVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL-QSSYATPVDLWSVGCI  204 (305)
T ss_dssp             HHHHHHHHTTCCCCCCCGGGEEECT-TCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHT-TCCCCTHHHHHHHHHH
T ss_pred             HHHHHHHhCCEEecCCCccEEEEcC-CCCeeecchhhhhhhcccccCCCcccChhhcCcchhc-CCCCChhehhhchHHH
Confidence            9999999999999999999999998 89999999999875432        248999999665 4569999999999999


Q ss_pred             HHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCC-----------------CCCCCCcccccCCcHHHHHH
Q 005986          313 MAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNS-----------------SSGNTGFQILDRNWGAGWNL  375 (666)
Q Consensus       313 LyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~-----------------~~~~~~~~~~~~~s~~~~dL  375 (666)
                      +|||++|++||..            .+.......+......+.                 ............+++++++|
T Consensus       205 l~ell~g~~pf~~------------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dl  272 (305)
T d1blxa_         205 FAEMFRRKPLFRG------------SSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDL  272 (305)
T ss_dssp             HHHHHHSSCSCCC------------SSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHH
T ss_pred             HHHHHHCCCCCCC------------CCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHH
Confidence            9999999999863            122111111111111110                 00111113345688999999


Q ss_pred             HHHhhhcCCCCCCCHHHHhcCCCCCCCC
Q 005986          376 LSLLLATKPSKRISCLDALRHPFLCGPR  403 (666)
Q Consensus       376 I~~mL~~DP~~RpTa~elL~HP~f~~~~  403 (666)
                      |.+||++||++||||+|+|+||||+++.
T Consensus       273 i~~mL~~dP~~R~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         273 LLKCLTFNPAKRISAYSALSHPYFQDLE  300 (305)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHHHCcCChhHCcCHHHHhcChhhcCch
Confidence            9999999999999999999999999876


No 28 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-49  Score=413.40  Aligned_cols=258  Identities=22%  Similarity=0.311  Sum_probs=210.3

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch----hhHHHHHHHHHHHHHhhhccCCCCCcceE
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV----QAQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~----~~~~~~~rEi~iL~~L~~~~~~~HpnIVk  160 (666)
                      +++|+++++||+|+||    +||+|++..     +++.||||+++..    .....+.+|+.+|+.++      ||||++
T Consensus         1 ~~ry~~i~~LG~G~fg----~V~~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~------h~niv~   65 (292)
T d1unla_           1 MQKYEKLEKIGEGTYG----TVFKAKNRE-----THEIVALKRVRLDDDDEGVPSSALREICLLKELK------HKNIVR   65 (292)
T ss_dssp             CCSEEEEEEEEECSSS----EEEEEEETT-----TCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCC------CTTBCC
T ss_pred             CCCCEeeeEEecCcCe----EEEEEEECC-----CCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcC------cCCEEe
Confidence            5799999999999999    999999998     8999999999642    23456789999999997      999999


Q ss_pred             EEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHH
Q 005986          161 VHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLL  240 (666)
Q Consensus       161 l~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl  240 (666)
                      +++++.     +....++|||++.+++|..++...+         .++                    ...++.+++|++
T Consensus        66 ~~~~~~-----~~~~~~iv~~~~~~~~l~~~~~~~~---------~~~--------------------~~~~~~~~~q~~  111 (292)
T d1unla_          66 LHDVLH-----SDKKLTLVFEFCDQDLKKYFDSCNG---------DLD--------------------PEIVKSFLFQLL  111 (292)
T ss_dssp             EEEEEE-----CSSEEEEEEECCSEEHHHHHHHTTT---------CCC--------------------HHHHHHHHHHHH
T ss_pred             eccccc-----cccceeEEeeecccccccccccccc---------ccc--------------------hhHHHHHHHHHH
Confidence            999999     8889999999999999988887654         233                    355789999999


Q ss_pred             HHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCCC---------CCCCCccccccccCCCchhhhhhHHH
Q 005986          241 IGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG---------PNNSSPDSNMDRRQMMIAFDMRCVGF  311 (666)
Q Consensus       241 ~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~~---------~~y~APEvl~~~~~ys~~sDIWSLGv  311 (666)
                      .||+|||++|||||||||+|||++. ++.+||+|||.|+......         +.|+|||++.+...++.++|||||||
T Consensus       112 ~aL~~lH~~~IvHrDiKP~NIli~~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~  190 (292)
T d1unla_         112 KGLGFCHSRNVLHRDLKPQNLLINR-NGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGC  190 (292)
T ss_dssp             HHHHHHHHTTEECCCCSGGGEEECT-TCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred             HHHHHhhcCCEeeecccCccccccc-CCceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccch
Confidence            9999999999999999999999998 8999999999998765432         66889998777777899999999999


Q ss_pred             HHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCC-------------------CCCCCcccccCCcHHH
Q 005986          312 MMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSS-------------------SGNTGFQILDRNWGAG  372 (666)
Q Consensus       312 iLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~-------------------~~~~~~~~~~~~s~~~  372 (666)
                      ++|||++|+.||.           .+.+.......+.........                   ............++++
T Consensus       191 il~ell~g~~p~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  259 (292)
T d1unla_         191 IFAELANAGRPLF-----------PGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATG  259 (292)
T ss_dssp             HHHHHTTTSCCSC-----------CCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHH
T ss_pred             HHHHHhhCCCCCC-----------CCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHH
Confidence            9999999998863           122222222222222221111                   1111223445678999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHhcCCCCCCCC
Q 005986          373 WNLLSLLLATKPSKRISCLDALRHPFLCGPR  403 (666)
Q Consensus       373 ~dLI~~mL~~DP~~RpTa~elL~HP~f~~~~  403 (666)
                      ++||.+||++||.+||||+|+|+||||++..
T Consensus       260 ~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~  290 (292)
T d1unla_         260 RDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred             HHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence            9999999999999999999999999998754


No 29 
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=1.6e-49  Score=413.34  Aligned_cols=247  Identities=17%  Similarity=0.220  Sum_probs=204.1

Q ss_pred             ccccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh-hHHHHHHHHHHHHHhhhccCCCCCcc
Q 005986           80 VIRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-AQRRGRRAIEVLKKLVRRRLMYHSYS  158 (666)
Q Consensus        80 ~~~~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~-~~~~~~rEi~iL~~L~~~~~~~HpnI  158 (666)
                      .+++..++|++.+.||+|+||    +||+|+++.     +++.||||+++... ..+.+.+|+++|++++      ||||
T Consensus        11 ~wei~~~~~~~~~~iG~G~fg----~Vy~a~~~~-----~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~------HpnI   75 (287)
T d1opja_          11 KWEMERTDITMKHKLGGGQYG----EVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK------HPNL   75 (287)
T ss_dssp             TTBCCGGGEEEEEETTTTTTS----SEEEEEEGG-----GTEEEEEEECCTTCSCHHHHHHHHHHHHHCC------CTTB
T ss_pred             ccEecHHHeEEeeEEeeCCCe----EEEEEEECC-----CCeEEEEEEECCccchHHHHHHHHHHHHhCC------CCCE
Confidence            345667899999999999999    999999998     89999999997532 3456799999999997      9999


Q ss_pred             eEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHH
Q 005986          159 MQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRD  238 (666)
Q Consensus       159 Vkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~Q  238 (666)
                      |++++++.     +.+.+|||||||++|+|.+++.+...       ..++                    ...++.|+.|
T Consensus        76 v~~~~~~~-----~~~~~~iv~E~~~~g~l~~~l~~~~~-------~~~~--------------------~~~~~~i~~q  123 (287)
T d1opja_          76 VQLLGVCT-----REPPFYIITEFMTYGNLLDYLRECNR-------QEVS--------------------AVVLLYMATQ  123 (287)
T ss_dssp             CCEEEEEC-----SSSSCEEEEECCTTCBHHHHHHHSCT-------TTSC--------------------HHHHHHHHHH
T ss_pred             ecCCccEe-----eCCeeEEEeecccCcchHHHhhhccc-------cchH--------------------HHHHHHHHHH
Confidence            99999998     77889999999999999999976421       1233                    4567889999


Q ss_pred             HHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCCC----------CCCCCccccccccCCCchhhhhh
Q 005986          239 LLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG----------PNNSSPDSNMDRRQMMIAFDMRC  308 (666)
Q Consensus       239 Il~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~~----------~~y~APEvl~~~~~ys~~sDIWS  308 (666)
                      |+.||+|||++||+||||||+|||++. ++.+||+|||+|+......          +.|+|||++. ...|+.++||||
T Consensus       124 i~~gL~yLH~~~iiHrDlKp~NILl~~-~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~k~DiwS  201 (287)
T d1opja_         124 ISSAMEYLEKKNFIHRDLAARNCLVGE-NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA-YNKFSIKSDVWA  201 (287)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEECG-GGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHH-HCCCSHHHHHHH
T ss_pred             HHHHHHHHHHCCcccCccccCeEEECC-CCcEEEccccceeecCCCCceeeccccccccccChHHHc-CCCCCchhhhhh
Confidence            999999999999999999999999998 8999999999998765432          5699999665 456999999999


Q ss_pred             HHHHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCC
Q 005986          309 VGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRI  388 (666)
Q Consensus       309 LGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp  388 (666)
                      |||++|||++|..||.           .+.+...+.+.+....         ..+.+..+++++++||.+||+.||++||
T Consensus       202 ~Gv~l~ell~~~~p~~-----------~~~~~~~~~~~i~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~Rp  261 (287)
T d1opja_         202 FGVLLWEIATYGMSPY-----------PGIDLSQVYELLEKDY---------RMERPEGCPEKVYELMRACWQWNPSDRP  261 (287)
T ss_dssp             HHHHHHHHHTTSCCSS-----------TTCCHHHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHHHHHHhCCCCCC-----------CcchHHHHHHHHhcCC---------CCCCCccchHHHHHHHHHHcCCCHhHCc
Confidence            9999999999766642           2333333333332211         1234567889999999999999999999


Q ss_pred             CHHHHhc
Q 005986          389 SCLDALR  395 (666)
Q Consensus       389 Ta~elL~  395 (666)
                      |++|+++
T Consensus       262 s~~ei~~  268 (287)
T d1opja_         262 SFAEIHQ  268 (287)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999976


No 30 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-49  Score=423.99  Aligned_cols=272  Identities=20%  Similarity=0.283  Sum_probs=205.9

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch----hhHHHHHHHHHHHHHhhhccCCCCCcceE
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV----QAQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~----~~~~~~~rEi~iL~~L~~~~~~~HpnIVk  160 (666)
                      -++|+++++||+|+||    +||+|+++.     +|+.||||++++.    ...+.+.+|+++|+.++      |||||+
T Consensus        17 ~~~Y~~i~~lG~G~fg----~V~~~~~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~------hpniv~   81 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYG----AVCSAVDGR-----TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR------HENVIG   81 (346)
T ss_dssp             BSSEEEEEEC----------CEEEEEETT-----TCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC------BTTBCC
T ss_pred             CCcEEEEEEEecCCCe----EEEEEEECC-----CCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcC------CCCeeE
Confidence            4789999999999999    999999988     8999999999742    23356789999999997      999999


Q ss_pred             EEEEEEecc-cCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHH
Q 005986          161 VHGYVSSHT-TSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDL  239 (666)
Q Consensus       161 l~~~~~~~~-~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QI  239 (666)
                      ++++|.... ......+|||||||+. +|..+++..          .|++                    ..++.+++||
T Consensus        82 l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~----------~l~~--------------------~~~~~~~~qi  130 (346)
T d1cm8a_          82 LLDVFTPDETLDDFTDFYLVMPFMGT-DLGKLMKHE----------KLGE--------------------DRIQFLVYQM  130 (346)
T ss_dssp             CSEEECSCSSTTTCCCCEEEEECCSE-EHHHHHHHC----------CCCH--------------------HHHHHHHHHH
T ss_pred             EEEEeccCccccccceEEEEEecccc-cHHHHHHhc----------cccH--------------------HHHHHHHHHH
Confidence            999997321 1234468999999965 888887653          3554                    4578999999


Q ss_pred             HHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC------CCCCCCccccccccCCCchhhhhhHHHHH
Q 005986          240 LIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED------GPNNSSPDSNMDRRQMMIAFDMRCVGFMM  313 (666)
Q Consensus       240 l~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~------~~~y~APEvl~~~~~ys~~sDIWSLGviL  313 (666)
                      +.||+|||++|||||||||+|||++. ++.+||+|||+|+.....      .+.|+|||++.+...++.++||||+||++
T Consensus       131 ~~aL~~LH~~~IiHrDiKp~NIL~~~-~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil  209 (346)
T d1cm8a_         131 LKGLRYIHAAGIIHRDLKPGNLAVNE-DCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIM  209 (346)
T ss_dssp             HHHHHHHHHTTEECCCCCGGGEEECT-TCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCcccccCcchhhccc-ccccccccccceeccCCccccccccccccCHHHHcCCCCCCccchhhcchHHH
Confidence            99999999999999999999999998 999999999999876543      37899999888878889999999999999


Q ss_pred             HHHHhCCCCChhhh---hhhhhccccCCChhhHHHH-----HHHHhccCCCCCC-CCcccccCCcHHHHHHHHHhhhcCC
Q 005986          314 AKMVLRELMDPLIF---TKFKSFLTKGIDPSCLREF-----LLQVLNRNSSSGN-TGFQILDRNWGAGWNLLSLLLATKP  384 (666)
Q Consensus       314 yemltG~~PF~~~~---~~~~~~~~~g~~~~~l~~~-----~~~~~~~~~~~~~-~~~~~~~~~s~~~~dLI~~mL~~DP  384 (666)
                      |+|++|++||....   .........+..+......     ............. .........++++++||.+||++||
T Consensus       210 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP  289 (346)
T d1cm8a_         210 AEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDA  289 (346)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSST
T ss_pred             HHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCCh
Confidence            99999999997421   1222222233332221110     0111111111111 1123446789999999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCCC
Q 005986          385 SKRISCLDALRHPFLCGPR  403 (666)
Q Consensus       385 ~~RpTa~elL~HP~f~~~~  403 (666)
                      ++||||+|+|+||||++..
T Consensus       290 ~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         290 EQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             TTSCCHHHHHHSGGGTTTC
T ss_pred             hHCcCHHHHhcChhhCcCC
Confidence            9999999999999999866


No 31 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-49  Score=426.07  Aligned_cols=274  Identities=18%  Similarity=0.261  Sum_probs=206.9

Q ss_pred             CeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchhhHHHHHHHHHHHHHhhhccCCCCCcceEEEEEEE
Q 005986           87 DFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQVHGYVS  166 (666)
Q Consensus        87 ~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~~~~~  166 (666)
                      +|+.+++||+|+||    +||+|+++.     +++.||||++....  ....+|+++|++++      |||||+++++|.
T Consensus        21 ~Y~~~k~LG~G~fg----~Vy~a~~~~-----~~~~vAiK~i~~~~--~~~~~Ei~il~~l~------h~niv~~~~~~~   83 (350)
T d1q5ka_          21 SYTDTKVIGNGSFG----VVYQAKLCD-----SGELVAIKKVLQDK--RFKNRELQIMRKLD------HCNIVRLRYFFY   83 (350)
T ss_dssp             EEEEEEEEEEETTE----EEEEEEETT-----TCCEEEEEEEECCS--SSCCHHHHHHHHCC------CTTBCCEEEEEE
T ss_pred             CcEeeeEEeeCcCe----EEEEEEECC-----CCCEEEEEEECccc--hHHHHHHHHHHhcC------CCCCCcEEEEEE
Confidence            69999999999999    999999998     89999999997532  23358999999997      999999999996


Q ss_pred             eccc-CCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHHHHH
Q 005986          167 SHTT-SGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIGVNY  245 (666)
Q Consensus       167 ~~~~-~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~aL~y  245 (666)
                      .... .+..++|||||||++ ++.+.+....     .....++                    +..++.|++||+.||+|
T Consensus        84 ~~~~~~~~~~~~lv~Ey~~~-~~~~~l~~~~-----~~~~~l~--------------------~~~~~~i~~qil~aL~y  137 (350)
T d1q5ka_          84 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYS-----RAKQTLP--------------------VIYVKLYMYQLFRSLAY  137 (350)
T ss_dssp             EC--CCSCCEEEEEEECCSE-EHHHHHHHHH-----HTTCCCC--------------------HHHHHHHHHHHHHHHHH
T ss_pred             ecCccCCceEEEEEEeccCC-ccHHHHHhhh-----hccCCCC--------------------HHHHHHHHHHHHHHHHH
Confidence            4322 345678999999998 4544443210     0111344                    45689999999999999


Q ss_pred             HHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCCC--------CCCCCccccccccCCCchhhhhhHHHHHHHHH
Q 005986          246 LHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG--------PNNSSPDSNMDRRQMMIAFDMRCVGFMMAKMV  317 (666)
Q Consensus       246 LHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~~--------~~y~APEvl~~~~~ys~~sDIWSLGviLyeml  317 (666)
                      ||++||+||||||+|||++.++..+||+|||+|+......        +.|+|||++.+...|+.++||||+||++|||+
T Consensus       138 LH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~  217 (350)
T d1q5ka_         138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL  217 (350)
T ss_dssp             HHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred             HHhcCCcccCCCcceEEEecCCCceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehh
Confidence            9999999999999999999845689999999998764432        78999998888888999999999999999999


Q ss_pred             hCCCCChh---hhhhhhhccccCCChhhHHHHHHHHhcc-CCCC-CC--CCcccccCCcHHHHHHHHHhhhcCCCCCCCH
Q 005986          318 LRELMDPL---IFTKFKSFLTKGIDPSCLREFLLQVLNR-NSSS-GN--TGFQILDRNWGAGWNLLSLLLATKPSKRISC  390 (666)
Q Consensus       318 tG~~PF~~---~~~~~~~~~~~g~~~~~l~~~~~~~~~~-~~~~-~~--~~~~~~~~~s~~~~dLI~~mL~~DP~~RpTa  390 (666)
                      +|++||..   ......++...|.+.............. ..+. ..  .........++++++||.+||++||++||||
T Consensus       218 ~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta  297 (350)
T d1q5ka_         218 LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP  297 (350)
T ss_dssp             HTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             hCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCH
Confidence            99999973   2333344444455443322211111100 0000 00  0011234678999999999999999999999


Q ss_pred             HHHhcCCCCCCCC
Q 005986          391 LDALRHPFLCGPR  403 (666)
Q Consensus       391 ~elL~HP~f~~~~  403 (666)
                      .|+|+||||++..
T Consensus       298 ~e~L~Hp~f~~~~  310 (350)
T d1q5ka_         298 LEACAHSFFDELR  310 (350)
T ss_dssp             HHHHTSGGGGGGG
T ss_pred             HHHhcCHhhcccc
Confidence            9999999998765


No 32 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.7e-49  Score=415.45  Aligned_cols=262  Identities=20%  Similarity=0.242  Sum_probs=200.2

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch----hhHHHHHHHHHHHHHhhhccCCCCCcceE
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV----QAQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~----~~~~~~~rEi~iL~~L~~~~~~~HpnIVk  160 (666)
                      +++|+++++||+|+||    +||+|+++.     +|+.||||++...    .....+.+|+++|++++      ||||++
T Consensus         9 ~~rY~i~~~LG~G~fg----~Vy~a~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~------h~nii~   73 (318)
T d3blha1           9 VSKYEKLAKIGQGTFG----EVFKARHRK-----TGQKVALKKVLMENEKEGFPITALREIKILQLLK------HENVVN   73 (318)
T ss_dssp             GGGEEEEEEEEECSSS----EEEEEEETT-----TCCEEEEEEC----CTTSSCHHHHHHHHHHHHCC------CTTBCC
T ss_pred             cCCEEEEEEEecCcCe----EEEEEEECC-----CCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhc------CCCccc
Confidence            5899999999999999    999999987     8999999998643    22356789999999997      999999


Q ss_pred             EEEEEEecc---cCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHH
Q 005986          161 VHGYVSSHT---TSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMR  237 (666)
Q Consensus       161 l~~~~~~~~---~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~  237 (666)
                      +++++....   ....+.+|+|||||+++.+..+.....         .++                    +..++.+++
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~---------~~~--------------------~~~~~~i~~  124 (318)
T d3blha1          74 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---------KFT--------------------LSEIKRVMQ  124 (318)
T ss_dssp             EEEEEEC----------CEEEEEECCCEEHHHHHTCTTC---------CCC--------------------HHHHHHHHH
T ss_pred             eEeeeecccccccccCceEEEEEeccCCCccchhhhccc---------ccc--------------------cHHHHHHHH
Confidence            999986321   113567999999999855554433221         233                    456899999


Q ss_pred             HHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccC-------------CCCCCCCccccccccCCCchh
Q 005986          238 DLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE-------------DGPNNSSPDSNMDRRQMMIAF  304 (666)
Q Consensus       238 QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~-------------~~~~y~APEvl~~~~~ys~~s  304 (666)
                      ||+.||.|||++||+||||||+|||++. ++.+||+|||+|+.+..             +.+.|+|||++.+...|+.++
T Consensus       125 qil~~l~~lH~~~ivHrDlKp~NILl~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~  203 (318)
T d3blha1         125 MLLNGLYYIHRNKILHRDMKAANVLITR-DGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPI  203 (318)
T ss_dssp             HHHHHHHHHHHTTEECCCCCGGGEEECT-TSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHH
T ss_pred             HHHHHHHHhccCCEEecCcCchheeecC-CCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHH
Confidence            9999999999999999999999999998 99999999999975542             226799999888888899999


Q ss_pred             hhhhHHHHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcc-----------------c---
Q 005986          305 DMRCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQ-----------------I---  364 (666)
Q Consensus       305 DIWSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~-----------------~---  364 (666)
                      |||||||++|||++|++||.+            .+.......+........+.......                 .   
T Consensus       204 DiwSlGvil~el~~g~~pf~~------------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (318)
T d3blha1         204 DLWGAGCIMAEMWTRSPIMQG------------NTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDR  271 (318)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCC------------SSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHH
T ss_pred             HcccCCceeeeHhhCCCCCCC------------CCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhh
Confidence            999999999999999999863            22222222333333222211110000                 0   


Q ss_pred             --ccCCcHHHHHHHHHhhhcCCCCCCCHHHHhcCCCCCCCC
Q 005986          365 --LDRNWGAGWNLLSLLLATKPSKRISCLDALRHPFLCGPR  403 (666)
Q Consensus       365 --~~~~s~~~~dLI~~mL~~DP~~RpTa~elL~HP~f~~~~  403 (666)
                        ....+++++|||.+||++||++||||+|+|+||||+..+
T Consensus       272 ~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~p  312 (318)
T d3blha1         272 LKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP  312 (318)
T ss_dssp             HHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSSS
T ss_pred             hccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccCC
Confidence              012367899999999999999999999999999998754


No 33 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-48  Score=416.46  Aligned_cols=271  Identities=18%  Similarity=0.220  Sum_probs=202.7

Q ss_pred             CCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh---hHHHHHHHHHHHHHhhhccCCCCCcceEEE
Q 005986           86 GDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ---AQRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (666)
Q Consensus        86 ~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~---~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~  162 (666)
                      ++|++++.||+|+||    +||+|+++.     +++.||||++.+..   ..+.+.+|+++|++|+      ||||++++
T Consensus         8 ~rY~~~~~LG~G~fg----~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~------hp~iv~~~   72 (345)
T d1pmea_           8 PRYTNLSYIGEGAYG----MVCSAYDNV-----NKVRVAIKKISPFEHQTYCQRTLREIKILLRFR------HENIIGIN   72 (345)
T ss_dssp             TTEEEEEECC---CC----CEEEEEETT-----TCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCC------CTTBCCCC
T ss_pred             CCeEEEEEEeeccCe----EEEEEEECC-----CCcEEEEEEEehhcChHHHHHHHHHHHHHHHcC------CCCCCcEE
Confidence            579999999999999    999999988     89999999997532   3346689999999997      99999999


Q ss_pred             EEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHH
Q 005986          163 GYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIG  242 (666)
Q Consensus       163 ~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~a  242 (666)
                      +++..+.......+|++|++ .+|+|.++++..          .+++                    ..++.++.||+.|
T Consensus        73 ~~~~~~~~~~~~~~~l~~~~-~~g~L~~~l~~~----------~l~~--------------------~~i~~i~~qil~a  121 (345)
T d1pmea_          73 DIIRAPTIEQMKDVYLVTHL-MGADLYKLLKTQ----------HLSN--------------------DHICYFLYQILRG  121 (345)
T ss_dssp             EEECCSSTTTCCCEEEEEEC-CCEEHHHHHHHC----------CCCH--------------------HHHHHHHHHHHHH
T ss_pred             EEEeeccccccceEEEEEee-cCCchhhhhhcC----------CCCH--------------------HHHHHHHHHHHHH
Confidence            99974433334456666654 567999999764          3444                    5689999999999


Q ss_pred             HHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccC------------CCCCCCCccccccccCCCchhhhhhHH
Q 005986          243 VNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE------------DGPNNSSPDSNMDRRQMMIAFDMRCVG  310 (666)
Q Consensus       243 L~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~------------~~~~y~APEvl~~~~~ys~~sDIWSLG  310 (666)
                      |+|||++|||||||||+|||++. ++.+||+|||+|.....            +.+.|+|||++.....|+.++||||+|
T Consensus       122 l~yLH~~~iiHRDIKp~NILl~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG  200 (345)
T d1pmea_         122 LKYIHSANVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG  200 (345)
T ss_dssp             HHHHHHTTEECCCCCGGGEEECT-TCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHH
T ss_pred             HHHHHHCCCcCCCCCcceEEECC-CCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccC
Confidence            99999999999999999999998 89999999999975432            226799999887778899999999999


Q ss_pred             HHHHHHHhCCCCChhhh---hhhhhccccCCChhhHH------HHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhh
Q 005986          311 FMMAKMVLRELMDPLIF---TKFKSFLTKGIDPSCLR------EFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLA  381 (666)
Q Consensus       311 viLyemltG~~PF~~~~---~~~~~~~~~g~~~~~l~------~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~  381 (666)
                      |++|+|++|++||....   .........+.+.....      .....................+..++++++||.+||+
T Consensus       201 ~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~  280 (345)
T d1pmea_         201 CILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLT  280 (345)
T ss_dssp             HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSC
T ss_pred             ceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHcc
Confidence            99999999999996321   11111111111111100      0000011111111111113455788999999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCC
Q 005986          382 TKPSKRISCLDALRHPFLCGPR  403 (666)
Q Consensus       382 ~DP~~RpTa~elL~HP~f~~~~  403 (666)
                      +||++||||+|+|+||||+...
T Consensus       281 ~dP~~R~ta~e~L~hpf~~~~~  302 (345)
T d1pmea_         281 FNPHKRIEVEQALAHPYLEQYY  302 (345)
T ss_dssp             SSTTTSCCHHHHHTSGGGTTTC
T ss_pred             CChhHCcCHHHHhcCHhhccCC
Confidence            9999999999999999998654


No 34 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.7e-49  Score=417.24  Aligned_cols=259  Identities=17%  Similarity=0.261  Sum_probs=208.3

Q ss_pred             ccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch------hhHHHHHHHHHHHHHhhhccCCCC
Q 005986           82 RFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV------QAQRRGRRAIEVLKKLVRRRLMYH  155 (666)
Q Consensus        82 ~~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~------~~~~~~~rEi~iL~~L~~~~~~~H  155 (666)
                      .+.+++|++++.||+|+||    +||+|++...  ..+|+.||||++++.      ...+.+.+|+++|++++     +|
T Consensus        20 ~~~l~~y~~~~~IG~G~fg----~Vy~~~~~~~--~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~-----h~   88 (322)
T d1vzoa_          20 KVGIENFELLKVLGTGAYG----KVFLVRKISG--HDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR-----QS   88 (322)
T ss_dssp             CCCGGGEEEEEEEEETTTE----EEEEEEECSS--TTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHH-----TC
T ss_pred             ccchhceEEEEEEecCCCe----EEEEEEECcc--CCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhcc-----CC
Confidence            3567999999999999999    9999998542  126899999998642      22345689999999998     35


Q ss_pred             CcceEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHH
Q 005986          156 SYSMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLL  235 (666)
Q Consensus       156 pnIVkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i  235 (666)
                      |||+++++++.     +...+++||||+.+|+|.+++...+         .+.|                    ..++.+
T Consensus        89 pnIv~~~~~~~-----~~~~~~~v~e~~~~~~L~~~i~~~~---------~~~e--------------------~~~~~~  134 (322)
T d1vzoa_          89 PFLVTLHYAFQ-----TETKLHLILDYINGGELFTHLSQRE---------RFTE--------------------HEVQIY  134 (322)
T ss_dssp             TTBCCEEEEEE-----ETTEEEEEECCCCSCBHHHHHHHHS---------CCCH--------------------HHHHHH
T ss_pred             CeEEEeeeeec-----cCCceeeeeecccccHHHHHHHhcc---------cccH--------------------HHHHHH
Confidence            89999999999     7789999999999999999998764         3333                    457889


Q ss_pred             HHHHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC----------CCCCCCcccccccc-CCCchh
Q 005986          236 MRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED----------GPNNSSPDSNMDRR-QMMIAF  304 (666)
Q Consensus       236 ~~QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~----------~~~y~APEvl~~~~-~ys~~s  304 (666)
                      ++||+.||+|||++|||||||||+|||++. ++.+||+|||+|+.+...          .+.|+|||.+.+.. .|+.++
T Consensus       135 ~~Qi~~al~~lH~~~ivHrDiKp~Nill~~-~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ks  213 (322)
T d1vzoa_         135 VGEIVLALEHLHKLGIIYRDIKLENILLDS-NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAV  213 (322)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCCGGGEEECT-TSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHH
T ss_pred             HHHHHHHHHHhhcCCEEeccCCccceeecC-CCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchh
Confidence            999999999999999999999999999998 899999999999765322          27899999776544 578899


Q ss_pred             hhhhHHHHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCC
Q 005986          305 DMRCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKP  384 (666)
Q Consensus       305 DIWSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP  384 (666)
                      |||||||+||||++|++||...           .................       .+.+..+++++++||.+||++||
T Consensus       214 DIWSlG~iLyelltG~~PF~~~-----------~~~~~~~~i~~~~~~~~-------~~~~~~~s~~~~~li~~~l~~dP  275 (322)
T d1vzoa_         214 DWWSLGVLMYELLTGASPFTVD-----------GEKNSQAEISRRILKSE-------PPYPQEMSALAKDLIQRLLMKDP  275 (322)
T ss_dssp             HHHHHHHHHHHHHHSSCTTSCT-----------TSCCCHHHHHHHHHHCC-------CCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             hhHHHHHHHHHHHhCCCCCCCC-----------CHHHHHHHHHHhcccCC-------CCCcccCCHHHHHHHHHHcccCH
Confidence            9999999999999999998632           11111122222222221       13345689999999999999999


Q ss_pred             CCCC-----CHHHHhcCCCCCCCCC
Q 005986          385 SKRI-----SCLDALRHPFLCGPRW  404 (666)
Q Consensus       385 ~~Rp-----Ta~elL~HP~f~~~~~  404 (666)
                      ++||     |++|+|+||||++++|
T Consensus       276 ~~R~s~~~~t~~eil~Hpff~~i~~  300 (322)
T d1vzoa_         276 KKRLGCGPRDADEIKEHLFFQKINW  300 (322)
T ss_dssp             GGSTTSSTTTHHHHHTSGGGTTCCH
T ss_pred             HHcCCCCcccHHHHHcCHhhcCCCH
Confidence            9999     5899999999998774


No 35 
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.4e-48  Score=399.21  Aligned_cols=241  Identities=16%  Similarity=0.173  Sum_probs=192.6

Q ss_pred             ccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch-hhHHHHHHHHHHHHHhhhccCCCCCcceEEE
Q 005986           84 NMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV-QAQRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (666)
Q Consensus        84 ~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~-~~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~  162 (666)
                      +.++|++++.||+|+||    +||+|+++      +++.||||+++.. ...+++.+|++++++++      |||||+++
T Consensus         3 dp~~~~~~~~iG~G~fg----~Vy~~~~~------~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~------HpnIv~~~   66 (263)
T d1sm2a_           3 DPSELTFVQEIGSGQFG----LVHLGYWL------NKDKVAIKTIREGAMSEEDFIEEAEVMMKLS------HPKLVQLY   66 (263)
T ss_dssp             CCSCEEEEEEEECCSSC----CEEEEEET------TTEEEEEEECCSSSSCHHHHHHHHHHHHHCC------CTTBCCEE
T ss_pred             ChHHcEEEEEEeeCCCe----EEEEEEEC------CCCEEEEEEECCCcCcHHHHHHHHHHHHhcC------CCCccccc
Confidence            34689999999999999    99999987      4778999999753 34466899999999997      99999999


Q ss_pred             EEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHH
Q 005986          163 GYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIG  242 (666)
Q Consensus       163 ~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~a  242 (666)
                      +++.     ..+.+|+|||||++|+|.+++.....        .++                    ...+..|+.||+.|
T Consensus        67 g~~~-----~~~~~~lv~E~~~~g~L~~~l~~~~~--------~~~--------------------~~~~~~i~~qia~g  113 (263)
T d1sm2a_          67 GVCL-----EQAPICLVFEFMEHGCLSDYLRTQRG--------LFA--------------------AETLLGMCLDVCEG  113 (263)
T ss_dssp             EEEC-----SSSSCEEEEECCTTCBHHHHHHTTTT--------CCC--------------------HHHHHHHHHHHHHH
T ss_pred             ceec-----cCCceEEEEEecCCCcHHHHhhcccc--------CCC--------------------HHHHHHHHHHHHHH
Confidence            9998     77889999999999999999876421        233                    34578899999999


Q ss_pred             HHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC----------CCCCCCccccccccCCCchhhhhhHHHH
Q 005986          243 VNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED----------GPNNSSPDSNMDRRQMMIAFDMRCVGFM  312 (666)
Q Consensus       243 L~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~----------~~~y~APEvl~~~~~ys~~sDIWSLGvi  312 (666)
                      |+|||+++|+||||||+|||++. ++.+||+|||+|+.....          .+.|+|||++. ...|+.++|||||||+
T Consensus       114 l~~lH~~~iiHrDlKp~Nill~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~k~DVwS~Gvi  191 (263)
T d1sm2a_         114 MAYLEEACVIHRDLAARNCLVGE-NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS-FSRYSSKSDVWSFGVL  191 (263)
T ss_dssp             HHHHHHTTCCCTTCSGGGEEECG-GGCEEECSCC------------------CTTSCCHHHHT-TCCCCHHHHHHHHHHH
T ss_pred             HHhhhccceeecccchhheeecC-CCCeEecccchheeccCCCceeecceecCcccCChHHhc-CCCCCchhhhcchHHH
Confidence            99999999999999999999998 999999999999765432          25799999665 4569999999999999


Q ss_pred             HHHHHhC-CCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCCHH
Q 005986          313 MAKMVLR-ELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCL  391 (666)
Q Consensus       313 LyemltG-~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpTa~  391 (666)
                      +|||+++ .+||.            +.+...+.+.+.....         ...+..+++++.+||.+||+.||++|||++
T Consensus       192 l~el~t~~~~~~~------------~~~~~~~~~~i~~~~~---------~~~p~~~~~~l~~li~~cl~~~p~~Rps~~  250 (263)
T d1sm2a_         192 MWEVFSEGKIPYE------------NRSNSEVVEDISTGFR---------LYKPRLASTHVYQIMNHCWKERPEDRPAFS  250 (263)
T ss_dssp             HHHHHTTSCCTTC------------SCCHHHHHHHHHHTCC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHHCCCCCCC------------CCCHHHHHHHHHhcCC---------CCCccccCHHHHHHHHHHccCCHhHCcCHH
Confidence            9999995 55543            2333333333332211         123356788999999999999999999999


Q ss_pred             HHhcC
Q 005986          392 DALRH  396 (666)
Q Consensus       392 elL~H  396 (666)
                      |+++|
T Consensus       251 ~il~~  255 (263)
T d1sm2a_         251 RLLRQ  255 (263)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986


No 36 
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-48  Score=413.84  Aligned_cols=272  Identities=14%  Similarity=0.109  Sum_probs=205.6

Q ss_pred             cccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch---hhHHHHHHHHHHHHHhhhccCCCCCc
Q 005986           81 IRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---QAQRRGRRAIEVLKKLVRRRLMYHSY  157 (666)
Q Consensus        81 ~~~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~---~~~~~~~rEi~iL~~L~~~~~~~Hpn  157 (666)
                      +++..++|++++.||+|+||    +||+|++...+.......||+|.+...   .....+.+|+.+|.++.     +|||
T Consensus        32 wei~~~~~~l~~~lG~G~fG----~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~Hpn  102 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFG----KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG-----SHEN  102 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSE----EEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHC-----CCTT
T ss_pred             ccCCHHHeEEeeEEeeCCCe----EEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhc-----CCCc
Confidence            44566899999999999999    999999987444444568999998643   23345689999999995     4999


Q ss_pred             ceEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhcc--CCCCCCCCCchhhHHHHHHH
Q 005986          158 SMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKV--GDDSIGGPAASRQLRLIRLL  235 (666)
Q Consensus       158 IVkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv--~~~~~~~~~~~~~~~~i~~i  235 (666)
                      ||++++++.     +.+.+|||||||++|+|.++|+.+..        .+++......  ..-........++...++.|
T Consensus       103 Iv~l~~~~~-----~~~~~~lv~Ey~~~g~L~~~l~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  169 (325)
T d1rjba_         103 IVNLLGACT-----LSGPIYLIFEYCCYGDLLNYLRSKRE--------KFSEDEIEYENQKRLEEEEDLNVLTFEDLLCF  169 (325)
T ss_dssp             BCCEEEEEC-----SSSSCEEEEECCTTCBHHHHHHTTTT--------CC---------------------CCHHHHHHH
T ss_pred             EeEEEEEEe-----eCCeEEEEEEcCCCCcHHHHHHhccC--------CCcchhhhhccccccccccccCCCCHHHHHHH
Confidence            999999998     77889999999999999999987532        1111100000  00000112234567789999


Q ss_pred             HHHHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCCC-----------CCCCCccccccccCCCchh
Q 005986          236 MRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG-----------PNNSSPDSNMDRRQMMIAF  304 (666)
Q Consensus       236 ~~QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~~-----------~~y~APEvl~~~~~ys~~s  304 (666)
                      +.||+.||+|||++|||||||||+|||++. ++.+||+|||+|+......           +.|||||++. ...|+.++
T Consensus       170 ~~qi~~gl~yLH~~~IiHRDlKp~Nill~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~~  247 (325)
T d1rjba_         170 AYQVAKGMEFLEFKSCVHRDLAARNVLVTH-GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF-EGIYTIKS  247 (325)
T ss_dssp             HHHHHHHHHHHHHTTEEETTCSGGGEEEET-TTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH-HCCCCHHH
T ss_pred             HHHHHHHHHHHHhCCeeeccCchhcccccc-CCeEEEeeccccccccCCCceeeeccccCCCccCChHHHc-CCCCCcce
Confidence            999999999999999999999999999998 9999999999997654332           5799999665 45699999


Q ss_pred             hhhhHHHHHHHHHh-CCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcC
Q 005986          305 DMRCVGFMMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATK  383 (666)
Q Consensus       305 DIWSLGviLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~D  383 (666)
                      |||||||++|||++ |++||.+.           .....+.+.+....         ..+.+..+++++++||.+||+.|
T Consensus       248 DiwS~Gvil~emlt~g~~Pf~~~-----------~~~~~~~~~~~~~~---------~~~~p~~~~~~l~~li~~cl~~d  307 (325)
T d1rjba_         248 DVWSYGILLWEIFSLGVNPYPGI-----------PVDANFYKLIQNGF---------KMDQPFYATEEIYIIMQSCWAFD  307 (325)
T ss_dssp             HHHHHHHHHHHHTTTSCCSSTTC-----------CCSHHHHHHHHTTC---------CCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             eccchhHHHHHHHhCCCCCCCCC-----------CHHHHHHHHHhcCC---------CCCCCCcCCHHHHHHHHHHcCCC
Confidence            99999999999997 89998631           11222333322111         12345678899999999999999


Q ss_pred             CCCCCCHHHHhcC
Q 005986          384 PSKRISCLDALRH  396 (666)
Q Consensus       384 P~~RpTa~elL~H  396 (666)
                      |++|||++||++|
T Consensus       308 P~~RPt~~ei~~~  320 (325)
T d1rjba_         308 SRKRPSFPNLTSF  320 (325)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999986


No 37 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-48  Score=415.02  Aligned_cols=273  Identities=17%  Similarity=0.211  Sum_probs=204.2

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch----hhHHHHHHHHHHHHHhhhccCCCCCcceE
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV----QAQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~----~~~~~~~rEi~iL~~L~~~~~~~HpnIVk  160 (666)
                      .++|+++++||+|+||    +||+|++..     +|+.||||++++.    ...+.+.+|+++|+.++      |||||+
T Consensus        17 ~~rY~i~~~LG~G~fg----~Vy~a~~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~------h~~iv~   81 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYG----SVCAAFDTK-----TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK------HENVIG   81 (348)
T ss_dssp             ETTEEEEEECGGGTTS----SEEEEEETT-----TTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCC------CTTBCC
T ss_pred             CCCeEEEEEEecCCCe----EEEEEEECC-----CCCEEEEEEECchhcChHHHHHHHHHHHHHHhcC------CCCeee
Confidence            3789999999999999    999999998     8999999999753    23345789999999997      999999


Q ss_pred             EEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHH
Q 005986          161 VHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLL  240 (666)
Q Consensus       161 l~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl  240 (666)
                      +++++......+....+++|+|+.+|+|.+++...          ++++                    ..++.+++||+
T Consensus        82 ~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~~----------~l~e--------------------~~~~~i~~qil  131 (348)
T d2gfsa1          82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ----------KLTD--------------------DHVQFLIYQIL  131 (348)
T ss_dssp             CSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTTC----------CCCH--------------------HHHHHHHHHHH
T ss_pred             EEEEEeeccccccCceEEEEEeecCCchhhhcccc----------cccH--------------------HHHHHHHHHHH
Confidence            99999743222333445556677788999998653          3554                    45789999999


Q ss_pred             HHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCCC------CCCCCccccccccCCCchhhhhhHHHHHH
Q 005986          241 IGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG------PNNSSPDSNMDRRQMMIAFDMRCVGFMMA  314 (666)
Q Consensus       241 ~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~~------~~y~APEvl~~~~~ys~~sDIWSLGviLy  314 (666)
                      .||+|||++||+||||||+|||++. ++.+|++|||+|.......      +.|+|||++.+...++.++|||||||++|
T Consensus       132 ~aL~~LH~~giiHrDiKp~NILi~~-~~~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~  210 (348)
T d2gfsa1         132 RGLKYIHSADIIHRDLKPSNLAVNE-DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA  210 (348)
T ss_dssp             HHHHHHHHTTCCCCCCCGGGEEECT-TCCEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCcccccCCccccccc-cccccccccchhcccCcccccccccccccCchhhcCCccCCcccchhhhhHHHH
Confidence            9999999999999999999999998 9999999999997664432      67999998888788899999999999999


Q ss_pred             HHHhCCCCChhhh---hhhhhccccCCChhhHHH-----HHHHHhccCCCCCCCCc-ccccCCcHHHHHHHHHhhhcCCC
Q 005986          315 KMVLRELMDPLIF---TKFKSFLTKGIDPSCLRE-----FLLQVLNRNSSSGNTGF-QILDRNWGAGWNLLSLLLATKPS  385 (666)
Q Consensus       315 emltG~~PF~~~~---~~~~~~~~~g~~~~~l~~-----~~~~~~~~~~~~~~~~~-~~~~~~s~~~~dLI~~mL~~DP~  385 (666)
                      +|++|++||.+..   ....+....+........     ................+ ......+++++|||.+||++||+
T Consensus       211 ~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~  290 (348)
T d2gfsa1         211 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD  290 (348)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGG
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChh
Confidence            9999999996321   111122222222211110     00111111111111111 22456889999999999999999


Q ss_pred             CCCCHHHHhcCCCCCCCC
Q 005986          386 KRISCLDALRHPFLCGPR  403 (666)
Q Consensus       386 ~RpTa~elL~HP~f~~~~  403 (666)
                      +||||+|+|+||||++..
T Consensus       291 ~R~ta~elL~Hp~f~~~~  308 (348)
T d2gfsa1         291 KRITAAQALAHAYFAQYH  308 (348)
T ss_dssp             GSCCHHHHHTSGGGTTTC
T ss_pred             hCcCHHHHhcCHhhCCCC
Confidence            999999999999999764


No 38 
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-48  Score=404.26  Aligned_cols=247  Identities=17%  Similarity=0.194  Sum_probs=195.4

Q ss_pred             cccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecc----hhhHHHHHHHHHHHHHhhhccCCCCC
Q 005986           81 IRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLIS----VQAQRRGRRAIEVLKKLVRRRLMYHS  156 (666)
Q Consensus        81 ~~~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~----~~~~~~~~rEi~iL~~L~~~~~~~Hp  156 (666)
                      +++..++|++++.||+|+||    +||+|+..        ..||||+++.    ....+.+.+|+.+|++++      ||
T Consensus         3 wei~~~~~~~~~~lG~G~fg----~Vy~~~~~--------~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~------Hp   64 (276)
T d1uwha_           3 WEIPDGQITVGQRIGSGSFG----TVYKGKWH--------GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR------HV   64 (276)
T ss_dssp             CBCCTTCCCCCSEEEECSSC----EEEEEESS--------SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCC------CT
T ss_pred             cccccccEEEEEEEeeCCCc----EEEEEEEC--------CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCC------CC
Confidence            35667899999999999999    99999753        3599999864    233456789999999997      99


Q ss_pred             cceEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHH
Q 005986          157 YSMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLM  236 (666)
Q Consensus       157 nIVkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~  236 (666)
                      |||++++++.      ...+|||||||++|+|.+++...+        ..++                    +..+..|+
T Consensus        65 nIv~~~~~~~------~~~~~lv~Ey~~~g~L~~~l~~~~--------~~~~--------------------~~~~~~i~  110 (276)
T d1uwha_          65 NILLFMGYST------APQLAIVTQWCEGSSLYHHLHIIE--------TKFE--------------------MIKLIDIA  110 (276)
T ss_dssp             TBCCEEEEEC------SSSCEEEEECCCEEEHHHHHHTSC--------CCCC--------------------HHHHHHHH
T ss_pred             CEeeeeEEEe------ccEEEEEEecCCCCCHHHHHhhcc--------CCCC--------------------HHHHHHHH
Confidence            9999999864      346899999999999999997642        1234                    35578899


Q ss_pred             HHHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccC-----------CCCCCCCccccccc--cCCCch
Q 005986          237 RDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE-----------DGPNNSSPDSNMDR--RQMMIA  303 (666)
Q Consensus       237 ~QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~-----------~~~~y~APEvl~~~--~~ys~~  303 (666)
                      .||+.||+|||++|||||||||+|||++. ++.+||+|||+|+....           +.+.|||||++.+.  ..|+.+
T Consensus       111 ~qi~~gl~yLH~~~ivHrDlKp~NiLl~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~  189 (276)
T d1uwha_         111 RQTAQGMDYLHAKSIIHRDLKSNNIFLHE-DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ  189 (276)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCCGGGEEEET-TSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHH
T ss_pred             HHHHHHHHHHhcCCEeccccCHHHEEEcC-CCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCch
Confidence            99999999999999999999999999998 99999999999976532           22679999977643  468999


Q ss_pred             hhhhhHHHHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcC
Q 005986          304 FDMRCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATK  383 (666)
Q Consensus       304 sDIWSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~D  383 (666)
                      +|||||||++|||++|+.||.+.           .+...+...+......+     ........+++++++||.+||+.|
T Consensus       190 sDiwS~Gv~l~el~tg~~Pf~~~-----------~~~~~~~~~~~~~~~~p-----~~~~~~~~~~~~l~~li~~cl~~d  253 (276)
T d1uwha_         190 SDVYAFGIVLYELMTGQLPYSNI-----------NNRDQIIFMVGRGYLSP-----DLSKVRSNCPKAMKRLMAECLKKK  253 (276)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTTTC-----------CCHHHHHHHHHHTSCCC-----CGGGSCTTCCHHHHHHHHHHTCSS
T ss_pred             hhhhhhHHHHHHHHHCCCCCCCC-----------ChHHHHHHHHhcCCCCC-----cchhccccchHHHHHHHHHHcCCC
Confidence            99999999999999999998632           12222222222211111     012334567899999999999999


Q ss_pred             CCCCCCHHHHhcC
Q 005986          384 PSKRISCLDALRH  396 (666)
Q Consensus       384 P~~RpTa~elL~H  396 (666)
                      |++|||++|+++|
T Consensus       254 p~~RPt~~~il~~  266 (276)
T d1uwha_         254 RDERPLFPQILAS  266 (276)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999999986


No 39 
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-48  Score=403.95  Aligned_cols=248  Identities=16%  Similarity=0.220  Sum_probs=199.4

Q ss_pred             cccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch-hhHHHHHHHHHHHHHhhhccCCCCCcce
Q 005986           81 IRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV-QAQRRGRRAIEVLKKLVRRRLMYHSYSM  159 (666)
Q Consensus        81 ~~~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~-~~~~~~~rEi~iL~~L~~~~~~~HpnIV  159 (666)
                      +++..++|++++.||+|+||    +||+|+++      +++.||||+++.. ...+.+.+|+++|++++      |||||
T Consensus         8 wei~~~~~~~~~~iG~G~fg----~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~------HpnIv   71 (272)
T d1qpca_           8 WEVPRETLKLVERLGAGQFG----EVWMGYYN------GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ------HQRLV   71 (272)
T ss_dssp             TBCCGGGEEEEEEEEEETTE----EEEEEEET------TTEEEEEEEECTTSSCHHHHHHHHHHHHHCC------CTTBC
T ss_pred             eecCHHHeEEeEEEecCCCc----EEEEEEEC------CCCEEEEEEEccCcCCHHHHHHHHHHHHhCC------CCCEe
Confidence            44556899999999999999    99999986      4789999999753 33456799999999997      99999


Q ss_pred             EEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHH
Q 005986          160 QVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDL  239 (666)
Q Consensus       160 kl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QI  239 (666)
                      ++++++.     + +.+|||||||++|+|.+++....       ...++                    ...+..|+.||
T Consensus        72 ~~~g~~~-----~-~~~~iv~Ey~~~g~L~~~~~~~~-------~~~l~--------------------~~~~~~i~~qi  118 (272)
T d1qpca_          72 RLYAVVT-----Q-EPIYIITEYMENGSLVDFLKTPS-------GIKLT--------------------INKLLDMAAQI  118 (272)
T ss_dssp             CEEEEEC-----S-SSCEEEEECCTTCBHHHHTTSHH-------HHTCC--------------------HHHHHHHHHHH
T ss_pred             EEEeeec-----c-CCeEEEEEeCCCCcHHHHHhhcC-------CCCCC--------------------HHHHHHHHHHH
Confidence            9999875     3 45789999999999999876531       11244                    45678899999


Q ss_pred             HHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCCC----------CCCCCccccccccCCCchhhhhhH
Q 005986          240 LIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG----------PNNSSPDSNMDRRQMMIAFDMRCV  309 (666)
Q Consensus       240 l~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~~----------~~y~APEvl~~~~~ys~~sDIWSL  309 (666)
                      +.||+|||++||+||||||+|||++. ++.+||+|||+|+......          +.|+|||++. ...|+.++|||||
T Consensus       119 ~~gl~~lH~~~ivHrDiKp~NIll~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~~sDvwS~  196 (272)
T d1qpca_         119 AEGMAFIEERNYIHRDLRAANILVSD-TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN-YGTFTIKSDVWSF  196 (272)
T ss_dssp             HHHHHHHHHTTEECSCCSGGGEEECT-TSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHH-HCEECHHHHHHHH
T ss_pred             HHHHHHHHhCCcccCccchhheeeec-ccceeeccccceEEccCCccccccccCCcccccChHHHh-CCCCCchhhhhhh
Confidence            99999999999999999999999998 9999999999998664332          5799999665 4568999999999


Q ss_pred             HHHHHHHHhCC-CCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCC
Q 005986          310 GFMMAKMVLRE-LMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRI  388 (666)
Q Consensus       310 GviLyemltG~-~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp  388 (666)
                      ||++|||++|. +||.            +.....+...   +....      ....+..+++++++||.+||+.||++||
T Consensus       197 Gvvl~ellt~~~~~~~------------~~~~~~~~~~---i~~~~------~~~~p~~~~~~l~~li~~cl~~~P~~Rp  255 (272)
T d1qpca_         197 GILLTEIVTHGRIPYP------------GMTNPEVIQN---LERGY------RMVRPDNCPEELYQLMRLCWKERPEDRP  255 (272)
T ss_dssp             HHHHHHHHTTTCCSST------------TCCHHHHHHH---HHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHHHHHhCCCCCCC------------CCCHHHHHHH---HHhcC------CCCCcccChHHHHHHHHHHcCCCHhHCc
Confidence            99999999954 4443            2222222222   22211      1233457889999999999999999999


Q ss_pred             CHHHHhc--CCCCC
Q 005986          389 SCLDALR--HPFLC  400 (666)
Q Consensus       389 Ta~elL~--HP~f~  400 (666)
                      |++++++  |+||.
T Consensus       256 t~~ei~~~L~~~ft  269 (272)
T d1qpca_         256 TFDYLRSVLEDFFT  269 (272)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhhhhhh
Confidence            9999998  78875


No 40 
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=3.5e-48  Score=405.56  Aligned_cols=247  Identities=16%  Similarity=0.146  Sum_probs=193.0

Q ss_pred             ccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch---hhHHHHHHHHHHHHHhhhccCCCCCcc
Q 005986           82 RFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---QAQRRGRRAIEVLKKLVRRRLMYHSYS  158 (666)
Q Consensus        82 ~~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~---~~~~~~~rEi~iL~~L~~~~~~~HpnI  158 (666)
                      ++..++|++.+.||+|+||    +||+|+++.++.  ....||||.+...   ...+.+.+|+++|++++      ||||
T Consensus        22 ~i~~~~~~~~~~lG~G~fg----~Vy~~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------HpnI   89 (299)
T d1jpaa_          22 EIDISCVKIEQVIGAGEFG----EVCSGHLKLPGK--REIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD------HPNV   89 (299)
T ss_dssp             BCCGGGEEEEEEEEECSSS----EEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC------CTTB
T ss_pred             hhChhhcEEeeEEeeCCCe----EEEEEEEeCCCC--EEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC------CCCC
Confidence            3556789999999999999    999999986211  2236999998642   33456789999999997      9999


Q ss_pred             eEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHH
Q 005986          159 MQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRD  238 (666)
Q Consensus       159 Vkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~Q  238 (666)
                      |++++++.     ..+.+|+|||||++|+|.+++....        ..+++                    ..+..|+.|
T Consensus        90 v~l~g~~~-----~~~~~~iv~Ey~~~g~L~~~~~~~~--------~~l~~--------------------~~~~~i~~q  136 (299)
T d1jpaa_          90 IHLEGVVT-----KSTPVMIITEFMENGSLDSFLRQND--------GQFTV--------------------IQLVGMLRG  136 (299)
T ss_dssp             CCEEEEEC-----SSSSCEEEEECCTTEEHHHHHHTTT--------TCSCH--------------------HHHHHHHHH
T ss_pred             ccEEEEEe-----eCCEEEEEEEecCCCcceeeecccc--------CCCCH--------------------HHHHHHHHH
Confidence            99999998     7788999999999999999987642        12443                    457889999


Q ss_pred             HHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC--------------CCCCCCccccccccCCCchh
Q 005986          239 LLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED--------------GPNNSSPDSNMDRRQMMIAF  304 (666)
Q Consensus       239 Il~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~--------------~~~y~APEvl~~~~~ys~~s  304 (666)
                      |+.||+|||++||+||||||+|||++. ++.+||+|||+|+.....              .+.|+|||.+. ...|+.++
T Consensus       137 ia~gl~yLH~~~iiHrDlKp~NILl~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~s  214 (299)
T d1jpaa_         137 IAAGMKYLADMNYVHRDLAARNILVNS-NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ-YRKFTSAS  214 (299)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECT-TCCEEECCC-----------------------CGGGSCHHHHH-SCCCCHHH
T ss_pred             HHHHHHHHhhCCCccCccccceEEECC-CCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHh-cCCCCccc
Confidence            999999999999999999999999998 999999999999865432              24699999654 45699999


Q ss_pred             hhhhHHHHHHHHHh-CCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcC
Q 005986          305 DMRCVGFMMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATK  383 (666)
Q Consensus       305 DIWSLGviLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~D  383 (666)
                      |||||||++|||++ |++||.+            .....+...+.   ...      ..+.+..+++++.+||.+||+.|
T Consensus       215 DvwS~Gvvl~el~t~g~~Pf~~------------~~~~~~~~~i~---~~~------~~~~~~~~~~~l~~li~~cl~~~  273 (299)
T d1jpaa_         215 DVWSYGIVMWEVMSYGERPYWD------------MTNQDVINAIE---QDY------RLPPPMDCPSALHQLMLDCWQKD  273 (299)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTTT------------CCHHHHHHHHH---TTC------CCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ccccchHHHHHHHhCCCCCCCC------------CCHHHHHHHHH---cCC------CCCCCccchHHHHHHHHHHcCCC
Confidence            99999999999998 8999853            23333333322   211      12344568899999999999999


Q ss_pred             CCCCCCHHHHhcC
Q 005986          384 PSKRISCLDALRH  396 (666)
Q Consensus       384 P~~RpTa~elL~H  396 (666)
                      |++|||+.|++++
T Consensus       274 P~~RPs~~ei~~~  286 (299)
T d1jpaa_         274 RNHRPKFGQIVNT  286 (299)
T ss_dssp             TTTSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999998764


No 41 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=4.6e-48  Score=399.69  Aligned_cols=250  Identities=16%  Similarity=0.150  Sum_probs=197.4

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch-----hhHHHHHHHHHHHHHhhhccCCCCCcce
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV-----QAQRRGRRAIEVLKKLVRRRLMYHSYSM  159 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~-----~~~~~~~rEi~iL~~L~~~~~~~HpnIV  159 (666)
                      .++|++.+.||+|+||    +||+|++..     +++.||||++++.     .....+.+|+++|+.++      |||||
T Consensus         6 ~drY~i~~~lG~G~fg----~Vy~a~~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~------hpniv   70 (277)
T d1o6ya_           6 SDRYELGEILGFGGMS----EVHLARDLR-----LHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN------HPAIV   70 (277)
T ss_dssp             TTTEEEEEEEEECSSE----EEEEEEETT-----TTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCC------CTTBC
T ss_pred             cceeEEeEEEeeCCCe----EEEEEEECC-----CCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcC------CCCCC
Confidence            3679999999999999    999999998     8999999999742     22345689999999996      99999


Q ss_pred             EEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHH
Q 005986          160 QVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDL  239 (666)
Q Consensus       160 kl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QI  239 (666)
                      ++++++.... .....+|||||||+||+|.+++...+         .+++                    ..++.|+.||
T Consensus        71 ~~~~~~~~~~-~~~~~~~lvmE~~~g~~L~~~~~~~~---------~l~~--------------------~~~~~i~~qi  120 (277)
T d1o6ya_          71 AVYDTGEAET-PAGPLPYIVMEYVDGVTLRDIVHTEG---------PMTP--------------------KRAIEVIADA  120 (277)
T ss_dssp             CEEEEEEEEC-SSSEEEEEEEECCCEEEHHHHHHHHC---------SCCH--------------------HHHHHHHHHH
T ss_pred             cccceeeecc-CCCceEEEEEECCCCCEehhhhcccC---------CCCH--------------------HHHHHHHHHH
Confidence            9999997431 12346899999999999999998754         3554                    4578899999


Q ss_pred             HHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccC------------CCCCCCCccccccccCCCchhhhh
Q 005986          240 LIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE------------DGPNNSSPDSNMDRRQMMIAFDMR  307 (666)
Q Consensus       240 l~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~------------~~~~y~APEvl~~~~~ys~~sDIW  307 (666)
                      +.||+|||++|||||||||+|||++. ++.++|+|||.+.....            +.+.|+|||++. ...|+.++|||
T Consensus       121 ~~al~~lH~~~iiHrDiKP~NIll~~-~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~-~~~~~~~~Diw  198 (277)
T d1o6ya_         121 CQALNFSHQNGIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR-GDSVDARSDVY  198 (277)
T ss_dssp             HHHHHHHHHTTEECCCCSGGGEEEET-TSCEEECCCTTCEECC----------------TTCCHHHHT-TCCCCHHHHHH
T ss_pred             HHHHHHHHhCCccCccccCcccccCc-cccceeehhhhhhhhccccccccccccccCcccccCHHHHc-CCCCCcceecc
Confidence            99999999999999999999999998 99999999999865432            237899999665 45699999999


Q ss_pred             hHHHHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCC
Q 005986          308 CVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKR  387 (666)
Q Consensus       308 SLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~R  387 (666)
                      ||||++|||++|++||..            .+....   +.........   ......+.+++++.+||.+||++||++|
T Consensus       199 SlGvilyelltG~~Pf~~------------~~~~~~---~~~~~~~~~~---~~~~~~~~~s~~l~~li~~~L~~dp~~R  260 (277)
T d1o6ya_         199 SLGCVLYEVLTGEPPFTG------------DSPVSV---AYQHVREDPI---PPSARHEGLSADLDAVVLKALAKNPENR  260 (277)
T ss_dssp             HHHHHHHHHHHSSCSCCC------------SSHHHH---HHHHHHCCCC---CGGGTSSSCCHHHHHHHHHHTCSSGGGS
T ss_pred             cchHHHHHHHhCCCCCCC------------cCHHHH---HHHHHhcCCC---CCchhccCCCHHHHHHHHHHccCCHhHC
Confidence            999999999999999853            222222   2222222111   1123346789999999999999999999


Q ss_pred             CCHHHHhcCCCC
Q 005986          388 ISCLDALRHPFL  399 (666)
Q Consensus       388 pTa~elL~HP~f  399 (666)
                      |+..+.|.|+|+
T Consensus       261 ~~sa~~l~~~l~  272 (277)
T d1o6ya_         261 YQTAAEMRADLV  272 (277)
T ss_dssp             CSSHHHHHHHHH
T ss_pred             HhHHHHHHHHHH
Confidence            955555556554


No 42 
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.1e-48  Score=400.10  Aligned_cols=248  Identities=16%  Similarity=0.188  Sum_probs=197.5

Q ss_pred             cccCCeEEEeE-eccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch---hhHHHHHHHHHHHHHhhhccCCCCCcc
Q 005986           83 FNMGDFKILDR-VSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---QAQRRGRRAIEVLKKLVRRRLMYHSYS  158 (666)
Q Consensus        83 ~~~~~Y~i~~~-LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~---~~~~~~~rEi~iL~~L~~~~~~~HpnI  158 (666)
                      +.-++|.+.+. ||+|+||    +||+|.++..+   ++..||||+++..   ...+.+.+|+++|++++      ||||
T Consensus         5 l~~~~~~~~~~~iG~G~fg----~Vy~~~~~~~~---~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~------HpnI   71 (285)
T d1u59a_           5 LKRDNLLIADIELGCGNFG----SVRQGVYRMRK---KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD------NPYI   71 (285)
T ss_dssp             CCGGGEEEEEEEEECCTTE----EEEEEEEC------CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCC------CTTB
T ss_pred             ecccCeEECCcEEecccCe----EEEEEEEecCC---CcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCC------CCCE
Confidence            34467888884 9999999    99999886522   4568999999753   33456789999999997      9999


Q ss_pred             eEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHH
Q 005986          159 MQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRD  238 (666)
Q Consensus       159 Vkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~Q  238 (666)
                      |++++++.     + +.+|||||||++|+|.+++...+        ..++                    ...+..|+.|
T Consensus        72 v~l~g~~~-----~-~~~~lvmE~~~~g~L~~~l~~~~--------~~l~--------------------~~~~~~i~~q  117 (285)
T d1u59a_          72 VRLIGVCQ-----A-EALMLVMEMAGGGPLHKFLVGKR--------EEIP--------------------VSNVAELLHQ  117 (285)
T ss_dssp             CCEEEEEE-----S-SSEEEEEECCTTEEHHHHHTTCT--------TTSC--------------------HHHHHHHHHH
T ss_pred             eeEeeeec-----c-CeEEEEEEeCCCCcHHHHhhccc--------cCCC--------------------HHHHHHHHHH
Confidence            99999987     3 35799999999999999986532        1233                    4567889999


Q ss_pred             HHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCCC------------CCCCCccccccccCCCchhhh
Q 005986          239 LLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG------------PNNSSPDSNMDRRQMMIAFDM  306 (666)
Q Consensus       239 Il~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~~------------~~y~APEvl~~~~~ys~~sDI  306 (666)
                      |+.||+|||++||+||||||+|||++. ++.+||+|||+|+.+....            +.|+|||++. ...|+.++||
T Consensus       118 i~~gL~ylH~~~iiHrDlKp~Nill~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~ksDV  195 (285)
T d1u59a_         118 VSMGMKYLEEKNFVHRDLAARNVLLVN-RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN-FRKFSSRSDV  195 (285)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEEEE-TTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHH-HCEECHHHHH
T ss_pred             HHHHHHHHHhCCeecCcCchhheeecc-CCceeeccchhhhcccccccccccccccccCccccChHHHh-CCCCCccchh
Confidence            999999999999999999999999998 9999999999998654322            4699999654 4569999999


Q ss_pred             hhHHHHHHHHHh-CCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCC
Q 005986          307 RCVGFMMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPS  385 (666)
Q Consensus       307 WSLGviLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~  385 (666)
                      |||||++|||++ |++||.+            ....++...+.   ...      ..+.++.+++++.+||.+||+.||+
T Consensus       196 wS~Gv~l~E~lt~G~~Pf~~------------~~~~~~~~~i~---~~~------~~~~p~~~~~~l~~li~~cl~~~p~  254 (285)
T d1u59a_         196 WSYGVTMWEALSYGQKPYKK------------MKGPEVMAFIE---QGK------RMECPPECPPELYALMSDCWIYKWE  254 (285)
T ss_dssp             HHHHHHHHHHHTTSCCTTTT------------CCTHHHHHHHH---TTC------CCCCCTTCCHHHHHHHHHTTCSSGG
T ss_pred             hcchHHHHHHHhCCCCCCCC------------CCHHHHHHHHH---cCC------CCCCCCcCCHHHHHHHHHHcCCCHh
Confidence            999999999998 8999863            22223333322   211      1234567889999999999999999


Q ss_pred             CCCCHHHH---hcCCCCC
Q 005986          386 KRISCLDA---LRHPFLC  400 (666)
Q Consensus       386 ~RpTa~el---L~HP~f~  400 (666)
                      +|||+.++   |+|+|+.
T Consensus       255 ~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         255 DRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             GSCCHHHHHHHHHHHHHH
T ss_pred             HCcCHHHHHHHHHHHHHH
Confidence            99999887   6777763


No 43 
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-47  Score=398.32  Aligned_cols=259  Identities=15%  Similarity=0.184  Sum_probs=204.8

Q ss_pred             cccccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh-hHHHHHHHHHHHHHhhhccCCCCCc
Q 005986           79 HVIRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-AQRRGRRAIEVLKKLVRRRLMYHSY  157 (666)
Q Consensus        79 ~~~~~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~-~~~~~~rEi~iL~~L~~~~~~~Hpn  157 (666)
                      ..+++..++|++++.||+|+||    +||+|+++.      ++.||||+++... ..+.+.+|+.+|++++      |||
T Consensus        10 ~~~~i~~~~~~i~~~iG~G~fg----~Vy~~~~~~------~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~------h~n   73 (285)
T d1fmka3          10 DAWEIPRESLRLEVKLGQGCFG----EVWMGTWNG------TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEK   73 (285)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSC----EEEEEEETT------TEEEEEEECCTTSSCHHHHHHHHHHHHHCC------CTT
T ss_pred             cceEcCHHHEEEeeEEeeCCCe----EEEEEEECC------CCEEEEEEECcccCCHHHHHHHHHHHHhcc------cCC
Confidence            3455677899999999999999    999999975      5679999997533 3456899999999997      999


Q ss_pred             ceEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHH
Q 005986          158 SMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMR  237 (666)
Q Consensus       158 IVkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~  237 (666)
                      ||++++++.     + +.+|+|||||++|+|.+++....       ...++                    ...+..|+.
T Consensus        74 Iv~~~g~~~-----~-~~~~lv~Ey~~~g~l~~~~~~~~-------~~~l~--------------------~~~~~~i~~  120 (285)
T d1fmka3          74 LVQLYAVVS-----E-EPIYIVTEYMSKGSLLDFLKGET-------GKYLR--------------------LPQLVDMAA  120 (285)
T ss_dssp             BCCEEEEEC-----S-SSCEEEECCCTTCBHHHHHSHHH-------HTTCC--------------------HHHHHHHHH
T ss_pred             EeEEEEEEe-----c-CCeEEEEEecCCCchhhhhhhcc-------cccch--------------------HHHHHHHHH
Confidence            999999986     3 35789999999999999886531       11244                    355789999


Q ss_pred             HHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC----------CCCCCCccccccccCCCchhhhh
Q 005986          238 DLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED----------GPNNSSPDSNMDRRQMMIAFDMR  307 (666)
Q Consensus       238 QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~----------~~~y~APEvl~~~~~ys~~sDIW  307 (666)
                      ||+.||+|||++||+||||||+||||+. ++.+||+|||+|+.....          .+.|+|||++. ...|+.++|||
T Consensus       121 ~i~~gl~~LH~~~ivH~DlKp~NIll~~-~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~ksDI~  198 (285)
T d1fmka3         121 QIASGMAYVERMNYVHRDLRAANILVGE-NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVW  198 (285)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEECG-GGCEEECCCCTTC--------------CCGGGSCHHHHH-HCCCCHHHHHH
T ss_pred             HHHHHHHHHhhhheecccccceEEEECC-CCcEEEcccchhhhccCCCceeeccccccccccChHHHh-CCCCCcHHhhh
Confidence            9999999999999999999999999998 899999999999765332          25799999665 55689999999


Q ss_pred             hHHHHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCC
Q 005986          308 CVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKR  387 (666)
Q Consensus       308 SLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~R  387 (666)
                      ||||++|||++|..||.           .+.....+...+.   ...      ..+....+++++++||.+||+.||++|
T Consensus       199 S~Giil~el~t~~~p~~-----------~~~~~~~~~~~i~---~~~------~~~~~~~~~~~l~~li~~cl~~dP~~R  258 (285)
T d1fmka3         199 SFGILLTELTTKGRVPY-----------PGMVNREVLDQVE---RGY------RMPCPPECPESLHDLMCQCWRKEPEER  258 (285)
T ss_dssp             HHHHHHHHHHTTTCCSS-----------TTCCHHHHHHHHH---TTC------CCCCCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             cchHHHHHHHhCCCCCC-----------CCCCHHHHHHHHH---hcC------CCCCCcccCHHHHHHHHHHcccCHhHC
Confidence            99999999999655542           1233333333322   111      123456788999999999999999999


Q ss_pred             CCHHHHhc--CCCCCCCCCCCCC
Q 005986          388 ISCLDALR--HPFLCGPRWRVDP  408 (666)
Q Consensus       388 pTa~elL~--HP~f~~~~~~~~~  408 (666)
                      ||++++++  |+||........|
T Consensus       259 ps~~~i~~~L~~~~~~~~p~~~p  281 (285)
T d1fmka3         259 PTFEYLQAFLEDYFTSTEPQYQP  281 (285)
T ss_dssp             CCHHHHHHHHHTTTSCSCCCCCC
T ss_pred             cCHHHHHHHHhhhhcCCCCCCCC
Confidence            99999998  9999886644444


No 44 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.1e-48  Score=398.45  Aligned_cols=238  Identities=16%  Similarity=0.168  Sum_probs=191.6

Q ss_pred             eEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh----hHHHHHHHHHHHHHhhhccCCCCCcceEEEEEEEe
Q 005986           92 DRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ----AQRRGRRAIEVLKKLVRRRLMYHSYSMQVHGYVSS  167 (666)
Q Consensus        92 ~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~----~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~~~~~~  167 (666)
                      ++||+|+||    +||+|.++...   +++.||||+++...    ..+.+.+|+++|++++      |||||++++++. 
T Consensus        13 k~iG~G~fG----~Vy~~~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~------HpnIv~~~g~~~-   78 (277)
T d1xbba_          13 KELGSGNFG----TVKKGYYQMKK---VVKTVAVKILKNEANDPALKDELLAEANVMQQLD------NPYIVRMIGICE-   78 (277)
T ss_dssp             EEEEECSSE----EEEEEEEECSS---SEEEEEEEEEC-----CHHHHHHHHHHHHHHTCC------CTTBCCEEEEEE-
T ss_pred             CCcccCCCe----EEEEEEEccCC---cCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCC------CCCCceEEEEec-
Confidence            479999999    99999876421   57899999996422    2356789999999997      999999999987 


Q ss_pred             cccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 005986          168 HTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIGVNYLH  247 (666)
Q Consensus       168 ~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~aL~yLH  247 (666)
                          ++ ..|||||||++|+|.+++.+..         .+++                    ..+..|+.||+.||+|||
T Consensus        79 ----~~-~~~lvmE~~~~g~L~~~l~~~~---------~l~~--------------------~~~~~i~~qi~~gl~ylH  124 (277)
T d1xbba_          79 ----AE-SWMLVMEMAELGPLNKYLQQNR---------HVKD--------------------KNIIELVHQVSMGMKYLE  124 (277)
T ss_dssp             ----SS-SEEEEEECCTTEEHHHHHHHCT---------TCCH--------------------HHHHHHHHHHHHHHHHHH
T ss_pred             ----cC-CEEEEEEcCCCCcHHHHHhhcc---------CCCH--------------------HHHHHHHHHHHHHHhhHH
Confidence                33 4689999999999999998754         3444                    457889999999999999


Q ss_pred             hCCCCcCCCCCCceEEcCCCCceeeecccccccccCC------------CCCCCCccccccccCCCchhhhhhHHHHHHH
Q 005986          248 SHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED------------GPNNSSPDSNMDRRQMMIAFDMRCVGFMMAK  315 (666)
Q Consensus       248 s~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~------------~~~y~APEvl~~~~~ys~~sDIWSLGviLye  315 (666)
                      ++|||||||||+|||++. ++.+||+|||+|+.+...            .+.|+|||++. ...|+.++|||||||++||
T Consensus       125 ~~~iiHrDlKp~Nill~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~-~~~~~~~sDiwS~Gv~l~e  202 (277)
T d1xbba_         125 ESNFVHRDLAARNVLLVT-QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN-YYKFSSKSDVWSFGVLMWE  202 (277)
T ss_dssp             HTTEECSCCSGGGEEEEE-TTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHH
T ss_pred             hCCcccCCCcchhhcccc-cCcccccchhhhhhccccccccccccccCCCceecCchhhc-CCCCCchhhhccchhhhhH
Confidence            999999999999999998 999999999999865432            25799999655 4568999999999999999


Q ss_pred             HHh-CCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCCHHHH-
Q 005986          316 MVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCLDA-  393 (666)
Q Consensus       316 mlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpTa~el-  393 (666)
                      |++ |++||.+            .+..++...+.   ...      ..+.+..+++++++||.+||+.||++|||++++ 
T Consensus       203 llt~g~~Pf~~------------~~~~~~~~~i~---~~~------~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~  261 (277)
T d1xbba_         203 AFSYGQKPYRG------------MKGSEVTAMLE---KGE------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE  261 (277)
T ss_dssp             HHTTTCCSSTT------------CCHHHHHHHHH---TTC------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             HhhCCCCCCCC------------CCHHHHHHHHH---cCC------CCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence            998 8999863            23333333322   111      123446788999999999999999999999998 


Q ss_pred             --hcCCCCC
Q 005986          394 --LRHPFLC  400 (666)
Q Consensus       394 --L~HP~f~  400 (666)
                        |+|+|++
T Consensus       262 ~~L~~~~~~  270 (277)
T d1xbba_         262 LRLRNYYYD  270 (277)
T ss_dssp             HHHHHHHHH
T ss_pred             HHhhCHHhh
Confidence              5677653


No 45 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.5e-47  Score=397.21  Aligned_cols=267  Identities=16%  Similarity=0.132  Sum_probs=197.9

Q ss_pred             ccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch---hhHHHHHHHHHHHHHhhhccCCCCCcc
Q 005986           82 RFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---QAQRRGRRAIEVLKKLVRRRLMYHSYS  158 (666)
Q Consensus        82 ~~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~---~~~~~~~rEi~iL~~L~~~~~~~HpnI  158 (666)
                      ++..++|+++++||+|+||    +||+|++.......+++.||||+++..   ...+...+|+.++.++.     .|+||
T Consensus         9 ei~~~~y~~~~~iG~G~fG----~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i   79 (299)
T d1ywna1           9 EFPRDRLKLGKPLGRGAFG----QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-----HHLNV   79 (299)
T ss_dssp             BCCGGGEEEEEEEEECSSC----EEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHC-----CCTTB
T ss_pred             cccHHHEEEeeEEeecCCe----EEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhc-----CCCeE
Confidence            4556889999999999999    999999987666667899999999743   23345688889999987     69999


Q ss_pred             eEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHH
Q 005986          159 MQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRD  238 (666)
Q Consensus       159 Vkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~Q  238 (666)
                      |.+++++..    .+..+++|||||++|+|.++|........-   ....++          ......++...++.|+.|
T Consensus        80 v~~~~~~~~----~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~---~~~~~~----------~~~~~~l~~~~~~~~~~q  142 (299)
T d1ywna1          80 VNLLGACTK----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVP---YKVAPE----------DLYKDFLTLEHLICYSFQ  142 (299)
T ss_dssp             CCEEEEECS----TTSCCEEEEECCTTCBHHHHHHHTGGGBCC------------------------CBCHHHHHHHHHH
T ss_pred             EEeeeeecc----CCCeEEEEEEecCCCcHHHHHHhccccccc---cccchh----------hhhcccCCHHHHHHHHHH
Confidence            999999862    556799999999999999999875321000   000000          011223556788999999


Q ss_pred             HHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC-----------CCCCCCccccccccCCCchhhhh
Q 005986          239 LLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED-----------GPNNSSPDSNMDRRQMMIAFDMR  307 (666)
Q Consensus       239 Il~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~-----------~~~y~APEvl~~~~~ys~~sDIW  307 (666)
                      |+.||+|||++|||||||||+|||++. ++.+||+|||+|+.....           .+.|+|||++. ...|+.++|||
T Consensus       143 i~~gl~ylH~~~ivHrDlKp~NILl~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~-~~~~~~~sDiw  220 (299)
T d1ywna1         143 VAKGMEFLASRKCIHRDLAARNILLSE-KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVYTIQSDVW  220 (299)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECG-GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHH-HCCCCHHHHHH
T ss_pred             HHHHHHHHHhCCCcCCcCCccceeECC-CCcEEEccCcchhhccccccccccCceeeCccccchhHhh-cCCCCccccee
Confidence            999999999999999999999999998 999999999999754322           25799999665 45699999999


Q ss_pred             hHHHHHHHHHhC-CCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCC
Q 005986          308 CVGFMMAKMVLR-ELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSK  386 (666)
Q Consensus       308 SLGviLyemltG-~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~  386 (666)
                      ||||++|||++| .+||...           .....+...+....         ..+.+..+++++++||.+||+.||++
T Consensus       221 S~Gvil~ellt~~~~p~~~~-----------~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~  280 (299)
T d1ywna1         221 SFGVLLWEIFSLGASPYPGV-----------KIDEEFCRRLKEGT---------RMRAPDYTTPEMYQTMLDCWHGEPSQ  280 (299)
T ss_dssp             HHHHHHHHHHTTSCCSSTTC-----------CCSHHHHHHHHHTC---------CCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             ehHHHHHHHHhCCCCCCCCC-----------CHHHHHHHHHhcCC---------CCCCCccCCHHHHHHHHHHcCCChhH
Confidence            999999999986 5676521           11222222222211         12344568899999999999999999


Q ss_pred             CCCHHHHhcC
Q 005986          387 RISCLDALRH  396 (666)
Q Consensus       387 RpTa~elL~H  396 (666)
                      |||++|+++|
T Consensus       281 Rpt~~eil~~  290 (299)
T d1ywna1         281 RPTFSELVEH  290 (299)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999987


No 46 
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.5e-48  Score=393.92  Aligned_cols=241  Identities=16%  Similarity=0.169  Sum_probs=199.4

Q ss_pred             ccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch-hhHHHHHHHHHHHHHhhhccCCCCCcceEEE
Q 005986           84 NMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV-QAQRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (666)
Q Consensus        84 ~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~-~~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~  162 (666)
                      +.++|+++++||+|+||    +||+|+++      +++.||||++++. ...+.+.+|++++++++      |||||+++
T Consensus         2 ~~~~~~~~~~iG~G~fg----~Vy~~~~~------~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~------HpnIv~~~   65 (258)
T d1k2pa_           2 DPKDLTFLKELGTGQFG----VVKYGKWR------GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------HEKLVQLY   65 (258)
T ss_dssp             CCCCCCCCCCCCEETTE----EEEEEEET------TTEEEEEEEEESSSSCHHHHHHHHHHHHTCC------CTTBCCEE
T ss_pred             ChHHCEEeEEEecCCCe----EEEEEEEC------CCCEEEEEEECcCcCCHHHHHHHHHHHHhcC------CCceeeEE
Confidence            34789999999999999    99999986      5889999999753 34567899999999997      99999999


Q ss_pred             EEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHH
Q 005986          163 GYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIG  242 (666)
Q Consensus       163 ~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~a  242 (666)
                      +++.     +.+.+++||||+++|+|.+++....        ..++                    ...++.++.||++|
T Consensus        66 g~~~-----~~~~~~iv~Ey~~~g~l~~~~~~~~--------~~~~--------------------~~~~~~i~~qi~~g  112 (258)
T d1k2pa_          66 GVCT-----KQRPIFIITEYMANGCLLNYLREMR--------HRFQ--------------------TQQLLEMCKDVCEA  112 (258)
T ss_dssp             EEEC-----CSSSEEEEEECCTTEEHHHHHHSGG--------GCCC--------------------HHHHHHHHHHHHHH
T ss_pred             EEEe-----eCCceEEEEEccCCCcHHHhhhccc--------cCCc--------------------HHHHHHHHHHHHHH
Confidence            9998     7788999999999999999976642        1233                    35578899999999


Q ss_pred             HHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCCC----------CCCCCccccccccCCCchhhhhhHHHH
Q 005986          243 VNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG----------PNNSSPDSNMDRRQMMIAFDMRCVGFM  312 (666)
Q Consensus       243 L~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~~----------~~y~APEvl~~~~~ys~~sDIWSLGvi  312 (666)
                      |+|||++||+||||||+|||++. ++.+||+|||+|+......          +.|+|||++. ...|+.++|||||||+
T Consensus       113 l~~LH~~~iiH~dlk~~Nill~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~ksDiwS~G~~  190 (258)
T d1k2pa_         113 MEYLESKQFLHRDLAARNCLVND-QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVL  190 (258)
T ss_dssp             HHHHHHTTBCCSCCSGGGEEECT-TCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHH-HCCCCHHHHHHHHHHH
T ss_pred             HHHHhhcCcccccccceeEEEcC-CCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhc-CCCCCcceeecccchh
Confidence            99999999999999999999998 9999999999997654332          4699999655 4568999999999999


Q ss_pred             HHHHHh-CCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCCHH
Q 005986          313 MAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCL  391 (666)
Q Consensus       313 Lyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpTa~  391 (666)
                      +|||++ |+.||..            .+..++...+..   ..      ....+...++++++||.+||+.||++|||++
T Consensus       191 l~el~t~g~~Pf~~------------~~~~~~~~~i~~---~~------~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~  249 (258)
T d1k2pa_         191 MWEIYSLGKMPYER------------FTNSETAEHIAQ---GL------RLYRPHLASEKVYTIMYSCWHEKADERPTFK  249 (258)
T ss_dssp             HHHHHTTSCCTTTT------------SCHHHHHHHHHT---TC------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred             hHhHHhcCCCCCCC------------CCHHHHHHHHHh---CC------CCCCcccccHHHHHHHHHHccCCHhHCcCHH
Confidence            999998 8999753            333333333222   11      1234456788999999999999999999999


Q ss_pred             HHhcC
Q 005986          392 DALRH  396 (666)
Q Consensus       392 elL~H  396 (666)
                      ++++|
T Consensus       250 eil~~  254 (258)
T d1k2pa_         250 ILLSN  254 (258)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99987


No 47 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.6e-47  Score=392.29  Aligned_cols=246  Identities=16%  Similarity=0.164  Sum_probs=191.7

Q ss_pred             ccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecc---hhhHHHHHHHHHHHHHhhhccCCCCCcc
Q 005986           82 RFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLIS---VQAQRRGRRAIEVLKKLVRRRLMYHSYS  158 (666)
Q Consensus        82 ~~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~---~~~~~~~~rEi~iL~~L~~~~~~~HpnI  158 (666)
                      ++..++|++++.||+|+||    +||+|++...+  ..+..||||.++.   ....+.+.+|+++|++++      ||||
T Consensus         3 ei~~~~~~l~~~iG~G~fg----~Vy~a~~~~~~--~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~------HpnI   70 (273)
T d1mp8a_           3 EIQRERIELGRCIGEGQFG----DVHQGIYMSPE--NPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD------HPHI   70 (273)
T ss_dssp             BCCGGGEEEEEEEEECSSS----EEEEEEECCC----CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCC------CTTB
T ss_pred             CcCHHHeEEEEEEeeCCCc----EEEEEEEecCC--ceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCC------CCCE
Confidence            4556799999999999999    99999987521  1356799999864   223355789999999997      9999


Q ss_pred             eEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHH
Q 005986          159 MQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRD  238 (666)
Q Consensus       159 Vkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~Q  238 (666)
                      |++++++.      .+.+|+|||||++|+|.+++....        ..++                    ...++.++.|
T Consensus        71 v~l~~~~~------~~~~~iv~E~~~~g~l~~~~~~~~--------~~l~--------------------~~~~~~~~~q  116 (273)
T d1mp8a_          71 VKLIGVIT------ENPVWIIMELCTLGELRSFLQVRK--------YSLD--------------------LASLILYAYQ  116 (273)
T ss_dssp             CCEEEEEC------SSSCEEEEECCTTEEHHHHHHHTT--------TTSC--------------------HHHHHHHHHH
T ss_pred             eeEEEEEe------cCeEEEEEEeccCCcHHhhhhccC--------CCCC--------------------HHHHHHHHHH
Confidence            99999985      356899999999999999887642        1234                    3557889999


Q ss_pred             HHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC----------CCCCCCccccccccCCCchhhhhh
Q 005986          239 LLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED----------GPNNSSPDSNMDRRQMMIAFDMRC  308 (666)
Q Consensus       239 Il~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~----------~~~y~APEvl~~~~~ys~~sDIWS  308 (666)
                      |+.||.|||++||+||||||+|||++. ++.+||+|||+|+.....          .+.|+|||++. ...|+.++||||
T Consensus       117 i~~gl~ylH~~~iiHrDlKp~NIll~~-~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~-~~~~~~~~DiwS  194 (273)
T d1mp8a_         117 LSTALAYLESKRFVHRDIAARNVLVSS-NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN-FRRFTSASDVWM  194 (273)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEEEE-TTEEEECC-------------------CCGGGCCHHHHH-HCCCSHHHHHHH
T ss_pred             HHHHhhhhcccCeeccccchhheeecC-CCcEEEccchhheeccCCcceeccceecCcccchhhHhc-cCCCCCcccccc
Confidence            999999999999999999999999998 899999999999865432          25799999654 556999999999


Q ss_pred             HHHHHHHHHh-CCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCC
Q 005986          309 VGFMMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKR  387 (666)
Q Consensus       309 LGviLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~R  387 (666)
                      |||++|||++ |.+||..            .+...+...+.   ...      ..+.++.+++++.+||.+||+.||++|
T Consensus       195 lGvil~e~lt~g~~P~~~------------~~~~~~~~~i~---~~~------~~~~~~~~~~~~~~li~~cl~~dp~~R  253 (273)
T d1mp8a_         195 FGVCMWEILMHGVKPFQG------------VKNNDVIGRIE---NGE------RLPMPPNCPPTLYSLMTKCWAYDPSRR  253 (273)
T ss_dssp             HHHHHHHHHTTSCCTTTT------------CCGGGHHHHHH---TTC------CCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             chHHHHHHHhcCCCCCCC------------CCHHHHHHHHH---cCC------CCCCCCCCCHHHHHHHHHHcCCCHhHC
Confidence            9999999998 8999753            23333333322   211      124556789999999999999999999


Q ss_pred             CCHHHHhcC
Q 005986          388 ISCLDALRH  396 (666)
Q Consensus       388 pTa~elL~H  396 (666)
                      ||+.|+++|
T Consensus       254 ps~~ei~~~  262 (273)
T d1mp8a_         254 PRFTELKAQ  262 (273)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999876


No 48 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.8e-47  Score=405.33  Aligned_cols=270  Identities=21%  Similarity=0.265  Sum_probs=197.3

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch----hhHHHHHHHHHHHHHhhhccCCCCCcceE
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV----QAQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~----~~~~~~~rEi~iL~~L~~~~~~~HpnIVk  160 (666)
                      +++|+++++||+|+||    +||+|+++.     +|+.||||++.+.    .....+.+|+.+|++++      |||||+
T Consensus        16 ~~~Y~i~~~LG~G~fg----~V~~~~d~~-----t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~------hpnIv~   80 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQG----IVCAAYDAV-----LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN------HKNIIS   80 (355)
T ss_dssp             ETTEEEEEECSCC--C----EEEEEEETT-----TTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCC------CTTBCC
T ss_pred             cCCeEEEEEeecCcCe----EEEEEEECC-----CCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcC------CCCeeE
Confidence            4789999999999999    999999998     8999999999743    23345789999999996      999999


Q ss_pred             EEEEEEeccc-CCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHH
Q 005986          161 VHGYVSSHTT-SGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDL  239 (666)
Q Consensus       161 l~~~~~~~~~-~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QI  239 (666)
                      ++++|..... .....+|+|||||.+ +|.+.+..           .+++                    ..++.+++||
T Consensus        81 ~~~~f~~~~~~~~~~~~~iv~Ey~~~-~l~~~~~~-----------~~~~--------------------~~i~~~~~qi  128 (355)
T d2b1pa1          81 LLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQM-----------ELDH--------------------ERMSYLLYQM  128 (355)
T ss_dssp             CSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHTS-----------CCCH--------------------HHHHHHHHHH
T ss_pred             EEEEEecccccccCceeEEEEeccch-HHHHhhhc-----------CCCH--------------------HHHHHHHHHH
Confidence            9999973221 245799999999987 56655543           2444                    4579999999


Q ss_pred             HHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC--------CCCCCCccccccccCCCchhhhhhHHH
Q 005986          240 LIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED--------GPNNSSPDSNMDRRQMMIAFDMRCVGF  311 (666)
Q Consensus       240 l~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~--------~~~y~APEvl~~~~~ys~~sDIWSLGv  311 (666)
                      +.||+|||++||+||||||+|||++. ++.+|++|||+++.....        .+.|+|||++.+ ..|+.++||||+||
T Consensus       129 l~gl~~LH~~giiHrDlKP~Nil~~~-~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~-~~~~~~~DiwSlG~  206 (355)
T d2b1pa1         129 LCGIKHLHSAGIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGC  206 (355)
T ss_dssp             HHHHHHHHHTTCCCSCCCGGGEEECT-TCCEEECCCCC---------------CCTTCCHHHHTT-CCCCTTHHHHHHHH
T ss_pred             HHHHHHhhhcccccccCCcccccccc-ccceeeechhhhhccccccccccccccccccChhhhcC-CCCCCCcccccccc
Confidence            99999999999999999999999998 899999999998765543        378999997765 56899999999999


Q ss_pred             HHHHHHhCCCCChhh---hhhhhhccccCCChhhH----HHHHHHHhccCCCCCCCCc-------------ccccCCcHH
Q 005986          312 MMAKMVLRELMDPLI---FTKFKSFLTKGIDPSCL----REFLLQVLNRNSSSGNTGF-------------QILDRNWGA  371 (666)
Q Consensus       312 iLyemltG~~PF~~~---~~~~~~~~~~g~~~~~l----~~~~~~~~~~~~~~~~~~~-------------~~~~~~s~~  371 (666)
                      ++|+|++|++||.+.   .....+....+.+....    ...................             ......+++
T Consensus       207 ~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  286 (355)
T d2b1pa1         207 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ  286 (355)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHH
T ss_pred             hHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHH
Confidence            999999999999632   11122221112111110    0111111111111111110             111234678


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHhcCCCCCCCC
Q 005986          372 GWNLLSLLLATKPSKRISCLDALRHPFLCGPR  403 (666)
Q Consensus       372 ~~dLI~~mL~~DP~~RpTa~elL~HP~f~~~~  403 (666)
                      +++||++||++||++||||+|+|+||||+...
T Consensus       287 ~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~  318 (355)
T d2b1pa1         287 ARDLLSKMLVIDPAKRISVDDALQHPYINVWY  318 (355)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred             HHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence            99999999999999999999999999998743


No 49 
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.2e-46  Score=387.36  Aligned_cols=248  Identities=14%  Similarity=0.177  Sum_probs=192.7

Q ss_pred             ccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch---hhHHHHHHHHHHHHHhhhccCCCCCcc
Q 005986           82 RFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---QAQRRGRRAIEVLKKLVRRRLMYHSYS  158 (666)
Q Consensus        82 ~~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~---~~~~~~~rEi~iL~~L~~~~~~~HpnI  158 (666)
                      ++..+.|++.+.||+|+||    +||+|.++..+. .....||||+++..   .....+.+|+++|++++      ||||
T Consensus         3 ei~~~~~~~~~~iG~G~fG----~Vy~~~~~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~------H~nI   71 (283)
T d1mqba_           3 EIHPSCVTRQKVIGAGEFG----EVYKGMLKTSSG-KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS------HHNI   71 (283)
T ss_dssp             BCCTTTEEEEEEEEECSSS----EEEEEEEEC----CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCC------CTTB
T ss_pred             cCCHHHeEeeeEEeeCCCe----EEEEEEEeCCCC-EEEEEEEEEEECcccChHHHHHHHHHHHHHHhcC------CCCE
Confidence            3556789999999999999    999999876211 12357999999642   23345689999999997      9999


Q ss_pred             eEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHH
Q 005986          159 MQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRD  238 (666)
Q Consensus       159 Vkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~Q  238 (666)
                      |++++++.     +...+++|||||.+|+|.+++....        ..++                    ...+..++.|
T Consensus        72 v~~~g~~~-----~~~~~~~v~e~~~~~~l~~~~~~~~--------~~~~--------------------~~~~~~i~~~  118 (283)
T d1mqba_          72 IRLEGVIS-----KYKPMMIITEYMENGALDKFLREKD--------GEFS--------------------VLQLVGMLRG  118 (283)
T ss_dssp             CCEEEEEC-----SSSSEEEEEECCTTEEHHHHHHHTT--------TCSC--------------------HHHHHHHHHH
T ss_pred             eeeeEEEe-----cCCceEEEEEecccCcchhhhhccc--------cccc--------------------HHHHHHHHHH
Confidence            99999998     7788999999999999999887642        1233                    3557889999


Q ss_pred             HHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC------------CCCCCCccccccccCCCchhhh
Q 005986          239 LLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED------------GPNNSSPDSNMDRRQMMIAFDM  306 (666)
Q Consensus       239 Il~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~------------~~~y~APEvl~~~~~ys~~sDI  306 (666)
                      |+.||+|||++||+||||||+|||++. ++.+||+|||+|+.....            .+.|+|||++. ...|+.++||
T Consensus       119 i~~gl~~lH~~~iiHrDlKp~NILl~~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~~~~~sDI  196 (283)
T d1mqba_         119 IAAGMKYLANMNYVHRDLAARNILVNS-NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS-YRKFTSASDV  196 (283)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECT-TCCEEECCCCC-----------------CCCGGGSCHHHHH-SCCCCHHHHH
T ss_pred             HHHhhhhccccccccCccccceEEECC-CCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHc-cCCCCCcccc
Confidence            999999999999999999999999998 999999999999865332            24699999654 5569999999


Q ss_pred             hhHHHHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCC
Q 005986          307 RCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSK  386 (666)
Q Consensus       307 WSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~  386 (666)
                      |||||++|||++|..||.           .+.+...+...+.   ...      ..+.+..+++++++||.+||+.||++
T Consensus       197 ~S~Gvil~el~t~~~~~~-----------~~~~~~~~~~~i~---~~~------~~~~~~~~~~~l~~li~~cl~~~p~~  256 (283)
T d1mqba_         197 WSFGIVMWEVMTYGERPY-----------WELSNHEVMKAIN---DGF------RLPTPMDCPSAIYQLMMQCWQQERAR  256 (283)
T ss_dssp             HHHHHHHHHHHTTSCCTT-----------TTCCHHHHHHHHH---TTC------CCCCCTTCBHHHHHHHHHHTCSSTTT
T ss_pred             cccHHHHHHHHhCCCCcc-----------ccCCHHHHHHHHh---ccC------CCCCchhhHHHHHHHHHHHCcCCHhH
Confidence            999999999999655542           1223333333322   111      12344567899999999999999999


Q ss_pred             CCCHHHHhc
Q 005986          387 RISCLDALR  395 (666)
Q Consensus       387 RpTa~elL~  395 (666)
                      |||+.|+++
T Consensus       257 RPt~~eil~  265 (283)
T d1mqba_         257 RPKFADIVS  265 (283)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999976


No 50 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.5e-47  Score=389.77  Aligned_cols=245  Identities=18%  Similarity=0.188  Sum_probs=195.7

Q ss_pred             cccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchhhHHHHHHHHHHHHHhhhccCCCCCcceE
Q 005986           81 IRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (666)
Q Consensus        81 ~~~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~~~~~~~rEi~iL~~L~~~~~~~HpnIVk  160 (666)
                      +.+.+++|++++.||+|+||    .||+|+++       |+.||||++++....+.+.+|++++++++      |||||+
T Consensus         2 w~i~~~~~~~~~~lG~G~fg----~Vy~~~~~-------~~~vAvK~i~~~~~~~~~~~E~~~l~~l~------HpnIv~   64 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFG----DVMLGDYR-------GNKVAVKCIKNDATAQAFLAEASVMTQLR------HSNLVQ   64 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSC----EEEEEEET-------TEEEEEEECCCCC--HHHHHTHHHHTTCC------CTTBCC
T ss_pred             CccCHHHeEEeEEEecCCCe----EEEEEEEC-------CeEEEEEEECcHHHHHHHHHHHHHHHhCC------CCCEee
Confidence            45778999999999999999    99999984       67899999988777788899999999997      999999


Q ss_pred             EEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHH
Q 005986          161 VHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLL  240 (666)
Q Consensus       161 l~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl  240 (666)
                      +++++..    +.+.+||||||+++|+|.+++.+.+       ...++                    ...++.|+.||+
T Consensus        65 ~~g~~~~----~~~~~~lv~ey~~~g~L~~~l~~~~-------~~~l~--------------------~~~~~~i~~~i~  113 (262)
T d1byga_          65 LLGVIVE----EKGGLYIVTEYMAKGSLVDYLRSRG-------RSVLG--------------------GDCLLKFSLDVC  113 (262)
T ss_dssp             EEEEECC----C--CCEEEECCCTTEEHHHHHHHHH-------HHHCC--------------------HHHHHHHHHHHH
T ss_pred             EEEEEEe----cCCcEEEEEeccCCCCHHHHHHhcC-------CCCCC--------------------HHHHHHHHHHHH
Confidence            9999862    4567899999999999999997642       11233                    355788999999


Q ss_pred             HHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCCC------CCCCCccccccccCCCchhhhhhHHHHHH
Q 005986          241 IGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG------PNNSSPDSNMDRRQMMIAFDMRCVGFMMA  314 (666)
Q Consensus       241 ~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~~------~~y~APEvl~~~~~ys~~sDIWSLGviLy  314 (666)
                      .||.|||+++|+||||||+|||++. ++.+||+|||+++......      ..|+|||++.+ ..|+.++|||||||++|
T Consensus       114 ~al~ylH~~~ivH~dlkp~Nil~~~-~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~-~~~t~~sDIwSfG~il~  191 (262)
T d1byga_         114 EAMEYLEGNNFVHRDLAARNVLVSE-DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLW  191 (262)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEECT-TSCEEECCCCC------------CCTTTSCHHHHHH-CCCCHHHHHHHHHHHHH
T ss_pred             hhccccccCceeccccchHhheecC-CCCEeecccccceecCCCCccccccccCCChHHHhC-CCCChHHHHHhHHHHHH
Confidence            9999999999999999999999998 9999999999998654332      68999997654 56999999999999999


Q ss_pred             HHHh-CCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCCHHHH
Q 005986          315 KMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCLDA  393 (666)
Q Consensus       315 emlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpTa~el  393 (666)
                      ||++ |++||..            .+..++...+   ...      ...+.+..+++++++||.+||..||++|||+.++
T Consensus       192 el~t~~~~p~~~------------~~~~~~~~~i---~~~------~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l  250 (262)
T d1byga_         192 EIYSFGRVPYPR------------IPLKDVVPRV---EKG------YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL  250 (262)
T ss_dssp             HHHTTSCCSCTT------------SCGGGHHHHH---TTT------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHHCCCCCCCC------------CCHHHHHHHH---HcC------CCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHH
Confidence            9998 7888652            2333333332   211      1224456788999999999999999999999999


Q ss_pred             hcC
Q 005986          394 LRH  396 (666)
Q Consensus       394 L~H  396 (666)
                      +++
T Consensus       251 ~~~  253 (262)
T d1byga_         251 REQ  253 (262)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            874


No 51 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.8e-46  Score=391.07  Aligned_cols=245  Identities=14%  Similarity=0.118  Sum_probs=196.3

Q ss_pred             ccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch---hhHHHHHHHHHHHHHhhhccCCCCCcceE
Q 005986           84 NMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---QAQRRGRRAIEVLKKLVRRRLMYHSYSMQ  160 (666)
Q Consensus        84 ~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~---~~~~~~~rEi~iL~~L~~~~~~~HpnIVk  160 (666)
                      .-++|++++.||+|+||    +||+|++..++.. ...+||+|.++..   ...+.+.+|+++|++++      |||||+
T Consensus         7 k~~dy~~~~~lG~G~fG----~Vy~~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------HpnIv~   75 (317)
T d1xkka_           7 KETEFKKIKVLGSGAFG----TVYKGLWIPEGEK-VKIPVAIKELREATSPKANKEILDEAYVMASVD------NPHVCR   75 (317)
T ss_dssp             CTTTEEEEEEEEECSSE----EEEEEEECC-----CCEEEEEEEECC----CTHHHHHHHHHHHHHCC------CTTBCC
T ss_pred             CHHHCEEeeEEecCCCe----EEEEEEEcCCCCE-EEEEEEEEEeccccCHHHHHHHHHHHHHHHhCC------CCCEee
Confidence            34689999999999999    9999999872211 2236899988642   23456799999999997      999999


Q ss_pred             EEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHH
Q 005986          161 VHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLL  240 (666)
Q Consensus       161 l~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl  240 (666)
                      +++++.     + ...+++|||+.+|+|.+++....        ..+++                    ..++.|+.||+
T Consensus        76 l~g~~~-----~-~~~~~v~e~~~~~~l~~~~~~~~--------~~~~~--------------------~~~~~i~~qi~  121 (317)
T d1xkka_          76 LLGICL-----T-STVQLITQLMPFGCLLDYVREHK--------DNIGS--------------------QYLLNWCVQIA  121 (317)
T ss_dssp             EEEEEE-----S-SSEEEEEECCTTCBHHHHHHHTS--------SSCCH--------------------HHHHHHHHHHH
T ss_pred             EEEEEe-----c-CCeeEEEEeccCCcccccccccc--------cCCCH--------------------HHHHHHHHHHH
Confidence            999997     4 35678899999999999887653        13443                    55788999999


Q ss_pred             HHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC-----------CCCCCCccccccccCCCchhhhhhH
Q 005986          241 IGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED-----------GPNNSSPDSNMDRRQMMIAFDMRCV  309 (666)
Q Consensus       241 ~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~-----------~~~y~APEvl~~~~~ys~~sDIWSL  309 (666)
                      .||+|||++|||||||||+|||++. ++.+||+|||+|+.....           .+.|+|||++.+ ..|+.++|||||
T Consensus       122 ~gl~yLH~~~iiHrDlKp~NIll~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~-~~~~~~sDvwS~  199 (317)
T d1xkka_         122 KGMNYLEDRRLVHRDLAARNVLVKT-PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH-RIYTHQSDVWSY  199 (317)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEEEE-TTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHH-CCCCHHHHHHHH
T ss_pred             HHHHHHHHcCcccCcchhhcceeCC-CCCeEeeccccceecccccccccccccccCccccChHHHhc-CCCChhhhhhhH
Confidence            9999999999999999999999998 999999999999865332           268999996654 469999999999


Q ss_pred             HHHHHHHHh-CCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCC
Q 005986          310 GFMMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRI  388 (666)
Q Consensus       310 GviLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp  388 (666)
                      ||++|||+| |.+||.+            .+...+...+....         ..+.++.+++++.+||.+||+.||++||
T Consensus       200 Gvil~el~t~g~~p~~~------------~~~~~~~~~i~~~~---------~~~~p~~~~~~~~~li~~cl~~dP~~RP  258 (317)
T d1xkka_         200 GVTVWELMTFGSKPYDG------------IPASEISSILEKGE---------RLPQPPICTIDVYMIMVKCWMIDADSRP  258 (317)
T ss_dssp             HHHHHHHHTTSCCTTTT------------SCGGGHHHHHHHTC---------CCCCCTTBCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHHHHHHCCCCCCCC------------CCHHHHHHHHHcCC---------CCCCCcccCHHHHHHHHHhCCCChhhCc
Confidence            999999998 7888752            33444444443321         1233456789999999999999999999


Q ss_pred             CHHHHhcC
Q 005986          389 SCLDALRH  396 (666)
Q Consensus       389 Ta~elL~H  396 (666)
                      |+.|+++|
T Consensus       259 s~~eil~~  266 (317)
T d1xkka_         259 KFRELIIE  266 (317)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999988


No 52 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=5e-46  Score=389.15  Aligned_cols=271  Identities=14%  Similarity=0.133  Sum_probs=205.2

Q ss_pred             ccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch---hhHHHHHHHHHHHHHhhhccCCCCCcc
Q 005986           82 RFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---QAQRRGRRAIEVLKKLVRRRLMYHSYS  158 (666)
Q Consensus        82 ~~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~---~~~~~~~rEi~iL~~L~~~~~~~HpnI  158 (666)
                      ++..++|++++.||+|+||    +||+|+++......+++.||||+++..   ...+.+.+|+++|++++      ||||
T Consensus         9 e~p~~~~~~~~~lG~G~fG----~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~------h~ni   78 (301)
T d1lufa_           9 EYPRNNIEYVRDIGEGAFG----RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD------NPNI   78 (301)
T ss_dssp             BCCGGGCEEEEEEEECSSC----EEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCC------CTTB
T ss_pred             cCCHHHcEEeEEEeeCCCe----EEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcC------CCCc
Confidence            4456789999999999999    999999875444457889999999753   23456799999999997      9999


Q ss_pred             eEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHH
Q 005986          159 MQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRD  238 (666)
Q Consensus       159 Vkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~Q  238 (666)
                      +++++++.     .....++||||+++|+|.+++...............     ..............++...+..|+.|
T Consensus        79 v~~~~~~~-----~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~i~~q  148 (301)
T d1lufa_          79 VKLLGVCA-----VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSD-----LSTRARVSSPGPPPLSCAEQLCIARQ  148 (301)
T ss_dssp             CCEEEEEC-----SSSSCEEEEECCTTCBHHHHHHHTCC---------------------------CCCCHHHHHHHHHH
T ss_pred             ccceeeec-----cCCceEEEEEecCCCcHHHHHHhcCccccccccccc-----cchhhhccccCCCCCCHHHHHHHHHH
Confidence            99999998     778999999999999999999875421110000000     00000111223345677889999999


Q ss_pred             HHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC-----------CCCCCCccccccccCCCchhhhh
Q 005986          239 LLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED-----------GPNNSSPDSNMDRRQMMIAFDMR  307 (666)
Q Consensus       239 Il~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~-----------~~~y~APEvl~~~~~ys~~sDIW  307 (666)
                      |+.||+|||++|||||||||+|||++. ++.+||+|||+|+.....           .+.|+|||.+. ...|+.++|||
T Consensus       149 i~~gl~ylH~~~ivHrDlKp~NILld~-~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~t~ksDVw  226 (301)
T d1lufa_         149 VAAGMAYLSERKFVHRDLATRNCLVGE-NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF-YNRYTTESDVW  226 (301)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEECG-GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH-HCCCCHHHHHH
T ss_pred             HHHHhhhcccCCeEeeEEcccceEECC-CCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHc-cCCCChhhhhc
Confidence            999999999999999999999999998 999999999999754322           15799999655 55699999999


Q ss_pred             hHHHHHHHHHhCC-CCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCC
Q 005986          308 CVGFMMAKMVLRE-LMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSK  386 (666)
Q Consensus       308 SLGviLyemltG~-~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~  386 (666)
                      ||||++|||++|. +||.            +.+..++...+   .....      .+.+..+++++.+||.+||+.||++
T Consensus       227 S~Gvvl~ell~~~~~p~~------------~~~~~e~~~~v---~~~~~------~~~p~~~~~~~~~li~~cl~~~P~~  285 (301)
T d1lufa_         227 AYGVVLWEIFSYGLQPYY------------GMAHEEVIYYV---RDGNI------LACPENCPLELYNLMRLCWSKLPAD  285 (301)
T ss_dssp             HHHHHHHHHHTTTCCTTT------------TSCHHHHHHHH---HTTCC------CCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             cchhhHHHHHccCCCCCC------------CCCHHHHHHHH---HcCCC------CCCCccchHHHHHHHHHHcCCChhH
Confidence            9999999999985 6664            23333333332   22211      2345578899999999999999999


Q ss_pred             CCCHHHHhc
Q 005986          387 RISCLDALR  395 (666)
Q Consensus       387 RpTa~elL~  395 (666)
                      |||+.|+++
T Consensus       286 RPt~~ev~~  294 (301)
T d1lufa_         286 RPSFCSIHR  294 (301)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999965


No 53 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.1e-45  Score=386.35  Aligned_cols=269  Identities=14%  Similarity=0.110  Sum_probs=207.3

Q ss_pred             ccccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch---hhHHHHHHHHHHHHHhhhccCCCCC
Q 005986           80 VIRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---QAQRRGRRAIEVLKKLVRRRLMYHS  156 (666)
Q Consensus        80 ~~~~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~---~~~~~~~rEi~iL~~L~~~~~~~Hp  156 (666)
                      .+++..++|+++++||+|+||    .||+|++....+..+++.||||+++..   .....+.+|+.+++++.     +||
T Consensus        17 ~~~~~~~~~~l~~~iG~G~fg----~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~-----~Hp   87 (311)
T d1t46a_          17 KWEFPRNRLSFGKTLGAGAFG----KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-----NHM   87 (311)
T ss_dssp             GGBCCGGGEEEEEEEEECSSE----EEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-----CCT
T ss_pred             cccCCHHHeEEeeEEeecCCe----EEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhcc-----CCC
Confidence            345667899999999999999    999999875444458899999999753   23345689999999996     599


Q ss_pred             cceEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHH
Q 005986          157 YSMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLM  236 (666)
Q Consensus       157 nIVkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~  236 (666)
                      |||++++++.     +...+|||||||++|+|.+++.+.........       .    ...........++...+..|+
T Consensus        88 nIv~~~g~~~-----~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~-------~----~~~~~~~~~~~l~~~~~~~~~  151 (311)
T d1t46a_          88 NIVNLLGACT-----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSK-------T----SPAIMEDDELALDLEDLLSFS  151 (311)
T ss_dssp             TBCCEEEEEC-----SSSSCEEEEECCTTEEHHHHHHHTTTTC-------------------------CCCCHHHHHHHH
T ss_pred             CEEEEEEEEe-----eCCEEEEEEEcCCCCCHHHHHHhccccccccc-------c----ccccccccccCCCHHHHHHHH
Confidence            9999999998     77889999999999999999987542111000       0    000011122356678899999


Q ss_pred             HHHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCCC-----------CCCCCccccccccCCCchhh
Q 005986          237 RDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG-----------PNNSSPDSNMDRRQMMIAFD  305 (666)
Q Consensus       237 ~QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~~-----------~~y~APEvl~~~~~ys~~sD  305 (666)
                      .||+.||+|||++|||||||||+|||++. ++.+||+|||+++......           +.|+|||++. ...|+.++|
T Consensus       152 ~qi~~gl~~LH~~~ivHrDLKp~NIl~~~-~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~D  229 (311)
T d1t46a_         152 YQVAKGMAFLASKNCIHRDLAARNILLTH-GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF-NCVYTFESD  229 (311)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSGGGEEEET-TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH-HCCCCHHHH
T ss_pred             HHHHHHHHHHHhCCeeecccccccccccc-cCcccccccchheeccCCCcceEeeecccChHHcCHHHhc-CCCCCCccc
Confidence            99999999999999999999999999998 8999999999998765432           5799999664 556899999


Q ss_pred             hhhHHHHHHHHHh-CCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCC
Q 005986          306 MRCVGFMMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKP  384 (666)
Q Consensus       306 IWSLGviLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP  384 (666)
                      ||||||++|||++ |.+||..           ......+.+.+.....         ...+...++++.+||.+||+.||
T Consensus       230 IwS~G~~l~ellt~g~p~~~~-----------~~~~~~~~~~i~~~~~---------~~~~~~~~~~l~~Li~~cl~~dP  289 (311)
T d1t46a_         230 VWSYGIFLWELFSLGSSPYPG-----------MPVDSKFYKMIKEGFR---------MLSPEHAPAEMYDIMKTCWDADP  289 (311)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTT-----------CCSSHHHHHHHHHTCC---------CCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             ccchHHHHHHHHhCCCCCCCC-----------CCHHHHHHHHHhcCCC---------CCCcccccHHHHHHHHHHcCCCh
Confidence            9999999999998 5665532           1122233333332221         12334678899999999999999


Q ss_pred             CCCCCHHHHhc
Q 005986          385 SKRISCLDALR  395 (666)
Q Consensus       385 ~~RpTa~elL~  395 (666)
                      ++|||++|+++
T Consensus       290 ~~RPs~~~il~  300 (311)
T d1t46a_         290 LKRPTFKQIVQ  300 (311)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hHCcCHHHHHH
Confidence            99999999986


No 54 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-45  Score=385.08  Aligned_cols=265  Identities=16%  Similarity=0.124  Sum_probs=200.5

Q ss_pred             cccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCC--CCCcEEEEEEecchh---hHHHHHHHHHHHHHhhhccCCCC
Q 005986           81 IRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSP--LHNTKVVLRQLISVQ---AQRRGRRAIEVLKKLVRRRLMYH  155 (666)
Q Consensus        81 ~~~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~--~tg~~VAIK~i~~~~---~~~~~~rEi~iL~~L~~~~~~~H  155 (666)
                      +.+..++|++++.||+|+||    .||+|++......  .++..||||++++..   ......+|..++.++.     .|
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg----~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~-----~H   78 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFG----QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-----KH   78 (299)
T ss_dssp             TBCCGGGEEEEEECC---------CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC-----CC
T ss_pred             CcccHHHeEEeeEEeecCCc----EEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhc-----CC
Confidence            44567899999999999999    9999998763221  234689999997532   3355688999999995     59


Q ss_pred             CcceEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHH
Q 005986          156 SYSMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLL  235 (666)
Q Consensus       156 pnIVkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i  235 (666)
                      ||||++++++.     +++.+++|||||++|+|.++|...........             ......+...++...++.+
T Consensus        79 pnIv~~~~~~~-----~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~-------------~~~~~~~~~~l~~~~~~~~  140 (299)
T d1fgka_          79 KNIINLLGACT-----QDGPLYVIVEYASKGNLREYLQARRPPGLEYS-------------YNPSHNPEEQLSSKDLVSC  140 (299)
T ss_dssp             TTBCCEEEEEC-----SSSSCEEEECCCTTCBHHHHHHTTSCC-------------------------CCCCCHHHHHHH
T ss_pred             CeEEecccccc-----cCCeEEEEEEccCCCcHHHHHHhhcCCccccc-------------cccccCccccCCHHHHHHH
Confidence            99999999998     77889999999999999999987642110000             0011223345667889999


Q ss_pred             HHHHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCCC-----------CCCCCccccccccCCCchh
Q 005986          236 MRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG-----------PNNSSPDSNMDRRQMMIAF  304 (666)
Q Consensus       236 ~~QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~~-----------~~y~APEvl~~~~~ys~~s  304 (666)
                      +.||+.||+|||++|||||||||+|||++. ++.+||+|||+++......           +.|+|||.+. ...|+.++
T Consensus       141 ~~qi~~al~ylH~~~ivHrDiKp~NiLl~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~-~~~y~~k~  218 (299)
T d1fgka_         141 AYQVARGMEYLASKKCIHRDLAARNVLVTE-DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQS  218 (299)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEECT-TCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHH-HCCCCHHH
T ss_pred             HHHHHHHHHHhhhCCEEeeeecccceeecC-CCCeEeccchhhccccccccccccccCCCChhhhhhhHhc-CCCCCchh
Confidence            999999999999999999999999999998 8999999999998664332           5799999665 45799999


Q ss_pred             hhhhHHHHHHHHHh-CCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcC
Q 005986          305 DMRCVGFMMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATK  383 (666)
Q Consensus       305 DIWSLGviLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~D  383 (666)
                      |||||||++|||++ |.+||.+            .+...+.+.+.   ...      ..+.+..+++++++||.+||+.|
T Consensus       219 DiwS~Gvvl~ell~~g~~p~~~------------~~~~~~~~~i~---~~~------~~~~p~~~~~~l~~li~~cl~~d  277 (299)
T d1fgka_         219 DVWSFGVLLWEIFTLGGSPYPG------------VPVEELFKLLK---EGH------RMDKPSNCTNELYMMMRDCWHAV  277 (299)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTT------------CCHHHHHHHHH---TTC------CCCCCSSCCHHHHHHHHHHTCSS
T ss_pred             hhHHhHHHHHHhccCCCCCCCC------------CCHHHHHHHHH---cCC------CCCCCccchHHHHHHHHHHccCC
Confidence            99999999999998 7888752            33333333322   111      12345678899999999999999


Q ss_pred             CCCCCCHHHHhc
Q 005986          384 PSKRISCLDALR  395 (666)
Q Consensus       384 P~~RpTa~elL~  395 (666)
                      |++|||+.|+++
T Consensus       278 P~~Rps~~eil~  289 (299)
T d1fgka_         278 PSQRPTFKQLVE  289 (299)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             HhHCcCHHHHHH
Confidence            999999999986


No 55 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.4e-46  Score=392.01  Aligned_cols=262  Identities=18%  Similarity=0.150  Sum_probs=204.1

Q ss_pred             ccccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCc--EEEEEEecchh---hHHHHHHHHHHHHHhhhccCCC
Q 005986           80 VIRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNT--KVVLRQLISVQ---AQRRGRRAIEVLKKLVRRRLMY  154 (666)
Q Consensus        80 ~~~~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~--~VAIK~i~~~~---~~~~~~rEi~iL~~L~~~~~~~  154 (666)
                      .+.++.++|++.++||+|+||    +||+|+++.     ++.  .||||+++...   ..+.+.+|+++|+++.     +
T Consensus         4 ~~~i~~~~~~~~~~iG~G~fg----~Vy~~~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-----~   69 (309)
T d1fvra_           4 YPVLDWNDIKFQDVIGEGNFG----QVLKARIKK-----DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----H   69 (309)
T ss_dssp             SSBCCGGGCEEEEEEECGGGC----EEEEEEEEE-----TTEEEEEEEEEEECC------CHHHHHHHHHTTCC-----C
T ss_pred             CCccCHHHcEEEEEEeeCCCc----EEEEEEECC-----CCeEEEEEEEEECcccChHHHHHHHHHHHHHHhcc-----C
Confidence            445678999999999999999    999999987     555  57888876422   2345789999999984     4


Q ss_pred             CCcceEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHH
Q 005986          155 HSYSMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRL  234 (666)
Q Consensus       155 HpnIVkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~  234 (666)
                      |||||++++++.     +++.+|+|||||++|+|.++|.+.........   +.          ........++...+..
T Consensus        70 HpnIv~~~~~~~-----~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~---~~----------~~~~~~~~l~~~~~~~  131 (309)
T d1fvra_          70 HPNIINLLGACE-----HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA---FA----------IANSTASTLSSQQLLH  131 (309)
T ss_dssp             CTTBCCEEEEEE-----ETTEEEEEECCCTTCBHHHHHHTTCHHHHCHH---HH----------HHTTBSCSSCHHHHHH
T ss_pred             CCCEeeEEEEEe-----cCCeeEEEEEecCCCcHHHHHhhccccccchh---hh----------ccccccCCCCHHHHHH
Confidence            999999999999     77899999999999999999987532111000   00          0011223456778899


Q ss_pred             HHHHHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccC--------CCCCCCCccccccccCCCchhhh
Q 005986          235 LMRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYE--------DGPNNSSPDSNMDRRQMMIAFDM  306 (666)
Q Consensus       235 i~~QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~--------~~~~y~APEvl~~~~~ys~~sDI  306 (666)
                      ++.||+.||.|||++||+||||||+|||++. ++.+||+|||+|+....        +...|+|||.+. ...|+.++||
T Consensus       132 ~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~-~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~sDv  209 (309)
T d1fvra_         132 FAADVARGMDYLSQKQFIHRDLAARNILVGE-NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLN-YSVYTTNSDV  209 (309)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECG-GGCEEECCTTCEESSCEECCC----CCTTTCCHHHHH-HCEECHHHHH
T ss_pred             HHHHHHHHHHhhhcCCccccccccceEEEcC-CCceEEccccccccccccccccceecCCcccchHHhc-cCCCCcccee
Confidence            9999999999999999999999999999998 89999999999975432        236899999665 4569999999


Q ss_pred             hhHHHHHHHHHhCC-CCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCC
Q 005986          307 RCVGFMMAKMVLRE-LMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPS  385 (666)
Q Consensus       307 WSLGviLyemltG~-~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~  385 (666)
                      |||||++|||++|. +||.            +.+...+.   ..+....      ..+.+..+++++++||.+||+.||+
T Consensus       210 wSfGvil~ell~~~~~p~~------------~~~~~~~~---~~i~~~~------~~~~~~~~~~~~~~li~~cl~~dP~  268 (309)
T d1fvra_         210 WSYGVLLWEIVSLGGTPYC------------GMTCAELY---EKLPQGY------RLEKPLNCDDEVYDLMRQCWREKPY  268 (309)
T ss_dssp             HHHHHHHHHHHTTSCCTTT------------TCCHHHHH---HHGGGTC------CCCCCTTBCHHHHHHHHHHTCSSGG
T ss_pred             ehhHHHHHHHHhcCCCCCC------------CCCHHHHH---HHHHhcC------CCCCCccCCHHHHHHHHHHcCCChh
Confidence            99999999999975 5554            23333332   2222221      1234556889999999999999999


Q ss_pred             CCCCHHHHhcC
Q 005986          386 KRISCLDALRH  396 (666)
Q Consensus       386 ~RpTa~elL~H  396 (666)
                      +|||+.|+++|
T Consensus       269 ~RPs~~eil~~  279 (309)
T d1fvra_         269 ERPSFAQILVS  279 (309)
T ss_dssp             GSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999999986


No 56 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-45  Score=379.98  Aligned_cols=245  Identities=18%  Similarity=0.166  Sum_probs=189.5

Q ss_pred             cccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch-----hhHHHHHHHHHHHHHhhhccCCCCCc
Q 005986           83 FNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV-----QAQRRGRRAIEVLKKLVRRRLMYHSY  157 (666)
Q Consensus        83 ~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~-----~~~~~~~rEi~iL~~L~~~~~~~Hpn  157 (666)
                      +..++|++++.||+|+||    .||+|++....  .....||||++++.     ...+.+.+|+++|++++      |||
T Consensus         5 i~~~d~~~~~~iG~G~fg----~Vy~~~~~~~~--~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~------H~n   72 (273)
T d1u46a_           5 IGEKDLRLLEKLGDGSFG----VVRRGEWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD------HRN   72 (273)
T ss_dssp             CCGGGEEEEEECC----C----CCEEEEEECTT--SCEEEEEEEC--------CHHHHHHHHHHHHHHHCC------CTT
T ss_pred             EchHHeEEEEEEecCCCe----EEEEEEEECCC--CcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCC------CCC
Confidence            345789999999999999    99999976521  13457999998742     22356789999999997      999


Q ss_pred             ceEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHH
Q 005986          158 SMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMR  237 (666)
Q Consensus       158 IVkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~  237 (666)
                      ||++++++.     + ..+++|||||++|+|.+++..+.        ..++                    ...+..++.
T Consensus        73 Iv~~~g~~~-----~-~~~~lv~e~~~~~~l~~~~~~~~--------~~l~--------------------~~~~~~~~~  118 (273)
T d1u46a_          73 LIRLYGVVL-----T-PPMKMVTELAPLGSLLDRLRKHQ--------GHFL--------------------LGTLSRYAV  118 (273)
T ss_dssp             BCCEEEEEC-----S-SSCEEEEECCTTCBHHHHHHHHG--------GGSC--------------------HHHHHHHHH
T ss_pred             EEEEEEEEe-----e-cchheeeeeecCcchhhhhhccc--------CCCC--------------------HHHHHHHHH
Confidence            999999997     4 35789999999999999887642        1244                    456789999


Q ss_pred             HHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCCC------------CCCCCccccccccCCCchhh
Q 005986          238 DLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG------------PNNSSPDSNMDRRQMMIAFD  305 (666)
Q Consensus       238 QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~~------------~~y~APEvl~~~~~ys~~sD  305 (666)
                      ||+.||.|||++||+||||||+|||++. ++.+||+|||+|+......            ..|+|||++. ...|+.++|
T Consensus       119 qi~~gl~ylH~~~iiHrDikp~NIll~~-~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~~D  196 (273)
T d1u46a_         119 QVAEGMGYLESKRFIHRDLAARNLLLAT-RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK-TRTFSHASD  196 (273)
T ss_dssp             HHHHHHHHHHHTTEECSCCCGGGEEEEE-TTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHH-HCEEEHHHH
T ss_pred             HHHHHHHHhhhCCEeeeeecHHHhcccc-ccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHh-CCCCCcchh
Confidence            9999999999999999999999999998 8999999999998764432            4689999665 466999999


Q ss_pred             hhhHHHHHHHHHh-CCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCC
Q 005986          306 MRCVGFMMAKMVL-RELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKP  384 (666)
Q Consensus       306 IWSLGviLyemlt-G~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP  384 (666)
                      ||||||++|||++ |++||.+            .+....   +..+....     ...+.+..+++++++||.+||+.||
T Consensus       197 i~S~Gvil~emlt~G~~Pf~~------------~~~~~~---~~~i~~~~-----~~~~~~~~~~~~l~~li~~cl~~dp  256 (273)
T d1u46a_         197 TWMFGVTLWEMFTYGQEPWIG------------LNGSQI---LHKIDKEG-----ERLPRPEDCPQDIYNVMVQCWAHKP  256 (273)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTT------------CCHHHH---HHHHHTSC-----CCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             hhhhHHHHHHHHhCCCCCCCC------------cCHHHH---HHHHHhCC-----CCCCCcccccHHHHHHHHHHcCCCh
Confidence            9999999999998 8999853            233222   22222221     1224456788999999999999999


Q ss_pred             CCCCCHHHHhc
Q 005986          385 SKRISCLDALR  395 (666)
Q Consensus       385 ~~RpTa~elL~  395 (666)
                      ++|||+.|+++
T Consensus       257 ~~RPt~~ei~~  267 (273)
T d1u46a_         257 EDRPTFVALRD  267 (273)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hHCcCHHHHHH
Confidence            99999999863


No 57 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.3e-45  Score=380.87  Aligned_cols=264  Identities=16%  Similarity=0.199  Sum_probs=206.9

Q ss_pred             cccccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh---hHHHHHHHHHHHHHhhhccCCCCCc
Q 005986           81 IRFNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ---AQRRGRRAIEVLKKLVRRRLMYHSY  157 (666)
Q Consensus        81 ~~~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~---~~~~~~rEi~iL~~L~~~~~~~Hpn  157 (666)
                      +++..++|+++++||+|+||    +||+|.++......+++.||||+++...   ....+.+|++++++++      |||
T Consensus        15 ~ei~~~~~~l~~~lG~G~fG----~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~------h~n   84 (308)
T d1p4oa_          15 WEVAREKITMSRELGQGSFG----MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN------CHH   84 (308)
T ss_dssp             TBCCGGGEEEEEEEEECSSS----EEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCC------CTT
T ss_pred             eeecHHHeEEeeEEeeCCCe----EEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcC------CCC
Confidence            45677899999999999999    9999998743333357899999997532   2234689999999996      999


Q ss_pred             ceEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHH
Q 005986          158 SMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMR  237 (666)
Q Consensus       158 IVkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~  237 (666)
                      ||++++++.     .....++|||||++|+|.+++........        .           ......++...+..++.
T Consensus        85 Iv~~~~~~~-----~~~~~~lv~e~~~~g~l~~~~~~~~~~~~--------~-----------~~~~~~~~~~~~~~i~~  140 (308)
T d1p4oa_          85 VVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPAMA--------N-----------NPVLAPPSLSKMIQMAG  140 (308)
T ss_dssp             BCCEEEEEC-----SSSSCEEEEECCTTCBHHHHHHHHHHHHH--------H-----------CTTCCCCCHHHHHHHHH
T ss_pred             EeeeeeEEe-----cCCceeEEEeecCCCCHHHHHHhcccccc--------c-----------ccccCCCCHHHHHHHHH
Confidence            999999998     77889999999999999999976421000        0           00111234567889999


Q ss_pred             HHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCC-----------CCCCCCccccccccCCCchhhh
Q 005986          238 DLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYED-----------GPNNSSPDSNMDRRQMMIAFDM  306 (666)
Q Consensus       238 QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~-----------~~~y~APEvl~~~~~ys~~sDI  306 (666)
                      |++.||.|||+++|+||||||+|||++. ++++||+|||+|+.....           .+.|+|||.+. ...|+.++||
T Consensus       141 ~ia~gl~~LH~~~ivHrDlk~~NiLld~-~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~-~~~~~~~~Dv  218 (308)
T d1p4oa_         141 EIADGMAYLNANKFVHRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK-DGVFTTYSDV  218 (308)
T ss_dssp             HHHHHHHHHHHTTCBCSCCSGGGEEECT-TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHH-HCCCCHHHHH
T ss_pred             HHHHHHHHHhhCCeeeceEcCCceeecC-CceEEEeecccceeccCCcceeeccceecccccCCHHHHc-cCCCCccccc
Confidence            9999999999999999999999999998 999999999999865432           27799999655 5568999999


Q ss_pred             hhHHHHHHHHHhCC-CCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCC
Q 005986          307 RCVGFMMAKMVLRE-LMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPS  385 (666)
Q Consensus       307 WSLGviLyemltG~-~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~  385 (666)
                      |||||++|||++|. +||.            +.+..+....+   ....      ..+.+..+++++.+||.+||+.||+
T Consensus       219 ~S~G~il~El~t~~~~p~~------------~~~~~~~~~~i---~~~~------~~~~p~~~~~~l~~li~~cl~~~P~  277 (308)
T d1p4oa_         219 WSFGVVLWEIATLAEQPYQ------------GLSNEQVLRFV---MEGG------LLDKPDNCPDMLFELMRMCWQYNPK  277 (308)
T ss_dssp             HHHHHHHHHHHHTSCCTTT------------TSCHHHHHHHH---HTTC------CCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             ccHHHHHHHHHhCCCCCCC------------CCCHHHHHHHH---HhCC------CCCCcccchHHHHHHHHHHcCCChh
Confidence            99999999999984 6664            23333333332   2211      1234467889999999999999999


Q ss_pred             CCCCHHHHhc------CCCCCC
Q 005986          386 KRISCLDALR------HPFLCG  401 (666)
Q Consensus       386 ~RpTa~elL~------HP~f~~  401 (666)
                      +|||+.++++      +|+|++
T Consensus       278 ~RPs~~~il~~L~~~~~~~~~~  299 (308)
T d1p4oa_         278 MRPSFLEIISSIKEEMEPGFRE  299 (308)
T ss_dssp             GSCCHHHHHHHHGGGSCTTHHH
T ss_pred             HCcCHHHHHHHHHHhcCCCCcC
Confidence            9999999997      666654


No 58 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=1.7e-43  Score=368.91  Aligned_cols=252  Identities=10%  Similarity=0.093  Sum_probs=191.4

Q ss_pred             CCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchhhHHHHHHHHHHHHHhhhccCCCCCcceEEEEEE
Q 005986           86 GDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQVHGYV  165 (666)
Q Consensus        86 ~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~~~~  165 (666)
                      ++|++++.||+|+||    +||+|++..     +++.||||++........+.+|+++++.++     .|++|+.+++++
T Consensus         7 ~rY~l~~~iG~G~fG----~Vy~a~~~~-----~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~-----~~~~i~~~~~~~   72 (299)
T d1ckia_           7 NRYRLGRKIGSGSFG----DIYLGTDIA-----AGEEVAIKLECVKTKHPQLHIESKIYKMMQ-----GGVGIPTIRWCG   72 (299)
T ss_dssp             TTEEEEEEEEECSSS----EEEEEEETT-----TTEEEEEEEEESCTTSCCHHHHHHHHHHST-----TSTTCCCEEEEE
T ss_pred             CEEEEeEEEeeCCCc----EEEEEEECC-----CCCEEEEEEEchhccCHHHHHHHHHHHHcc-----CCCcccEEEEEE
Confidence            579999999999999    999999987     899999999886555566889999999997     344555666666


Q ss_pred             EecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHHHHH
Q 005986          166 SSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIGVNY  245 (666)
Q Consensus       166 ~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~aL~y  245 (666)
                      .     +....++||||+++ +|.+.+....        ..++                    ...+..++.|++.||+|
T Consensus        73 ~-----~~~~~~ivme~~~~-~l~~~~~~~~--------~~~~--------------------~~~~~~~~~qi~~~l~~  118 (299)
T d1ckia_          73 A-----EGDYNVMVMELLGP-SLEDLFNFCS--------RKFS--------------------LKTVLLLADQMISRIEY  118 (299)
T ss_dssp             E-----ETTEEEEEEECCCC-BHHHHHHHTT--------TCCC--------------------HHHHHHHHHHHHHHHHH
T ss_pred             e-----cCCEEEEEEEEcCC-chhhhhhhcc--------CCCc--------------------HHHHHHHHHHHHHHHHH
Confidence            6     67889999999977 7777765532        1344                    35678999999999999


Q ss_pred             HHhCCCCcCCCCCCceEEcC--CCCceeeecccccccccC----------------CCCCCCCccccccccCCCchhhhh
Q 005986          246 LHSHGLAHTELRLENVHISP--VDRHIKVGILGNAADFYE----------------DGPNNSSPDSNMDRRQMMIAFDMR  307 (666)
Q Consensus       246 LHs~gIvHRDLKPeNILi~~--~~g~vKL~DFGlA~~~~~----------------~~~~y~APEvl~~~~~ys~~sDIW  307 (666)
                      ||++|||||||||+|||++.  .+..+||+|||+|+.+..                +.+.|+|||++. ...|+.++|||
T Consensus       119 lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Diw  197 (299)
T d1ckia_         119 IHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHL-GIEQSRRDDLE  197 (299)
T ss_dssp             HHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHT-TBCCCHHHHHH
T ss_pred             HHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHh-CCCCCChhhEE
Confidence            99999999999999999875  245799999999986542                237899999655 45599999999


Q ss_pred             hHHHHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCC
Q 005986          308 CVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKR  387 (666)
Q Consensus       308 SLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~R  387 (666)
                      ||||++|||++|++||.......        ...............+.      ......+++++.+||.+||+.||++|
T Consensus       198 SlG~~l~el~tg~~P~~~~~~~~--------~~~~~~~~~~~~~~~~~------~~~~~~~p~~~~~li~~cl~~~p~~R  263 (299)
T d1ckia_         198 SLGYVLMYFNLGSLPWQGLKAAT--------KRQKYERISEKKMSTPI------EVLCKGYPSEFATYLNFCRSLRFDDK  263 (299)
T ss_dssp             HHHHHHHHHHHSSCTTCCCC---------------HHHHHHHHHHSCH------HHHTTTSCHHHHHHHHHHHHSCTTCC
T ss_pred             ecCHHHHHHHhCCCcccccchHH--------HHHHHHHhhcccCCCCh------hHhccCCCHHHHHHHHHHccCChhHC
Confidence            99999999999999986321100        00111111111111110      12234678899999999999999999


Q ss_pred             CCHHH---HhcCCCCC
Q 005986          388 ISCLD---ALRHPFLC  400 (666)
Q Consensus       388 pTa~e---lL~HP~f~  400 (666)
                      |++++   +|+|+|.+
T Consensus       264 P~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         264 PDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             CCHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHH
Confidence            99875   46776653


No 59 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.3e-43  Score=370.80  Aligned_cols=242  Identities=14%  Similarity=0.161  Sum_probs=188.6

Q ss_pred             EEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecc---hhhHHHHHHHHHHHHHhhhccCCCCCcceEEEEEE
Q 005986           89 KILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLIS---VQAQRRGRRAIEVLKKLVRRRLMYHSYSMQVHGYV  165 (666)
Q Consensus        89 ~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~---~~~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~~~~  165 (666)
                      ...++||+|+||    +||+|++....  .+...||||+++.   ....+.+.+|+++|++++      |||||++++++
T Consensus        30 ~~~~~iG~G~fg----~Vyk~~~~~~~--~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~------HpnIv~~~g~~   97 (311)
T d1r0pa_          30 HFNEVIGRGHFG----CVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS------HPNVLSLLGIC   97 (311)
T ss_dssp             EEEEEEEEETTE----EEEEEEECC------CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCC------CTTBCCCCEEE
T ss_pred             ccceEEeecCCe----EEEEEEEECCC--CEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC------CCCEeEEeEEE
Confidence            346889999999    99999987621  1234699999864   233456799999999997      99999999997


Q ss_pred             EecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHHHHH
Q 005986          166 SSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIGVNY  245 (666)
Q Consensus       166 ~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~aL~y  245 (666)
                      ..    .++..++|||||++|+|.+++.....        .+                    +...+..++.|++.||.|
T Consensus        98 ~~----~~~~~~lv~E~~~~g~l~~~~~~~~~--------~~--------------------~~~~~~~i~~qia~gL~~  145 (311)
T d1r0pa_          98 LR----SEGSPLVVLPYMKHGDLRNFIRNETH--------NP--------------------TVKDLIGFGLQVAKGMKF  145 (311)
T ss_dssp             EE----TTTEEEEEEECCTTCBHHHHHHCTTC--------CC--------------------BHHHHHHHHHHHHHHHHH
T ss_pred             Ee----cCCceEEEEEEeecCchhhhhccccc--------cc--------------------hHHHHHHHHHHHHHhhhh
Confidence            62    45789999999999999999876431        12                    234578899999999999


Q ss_pred             HHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCCC-------------CCCCCccccccccCCCchhhhhhHHHH
Q 005986          246 LHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDG-------------PNNSSPDSNMDRRQMMIAFDMRCVGFM  312 (666)
Q Consensus       246 LHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~~-------------~~y~APEvl~~~~~ys~~sDIWSLGvi  312 (666)
                      ||+.||+||||||+|||+++ ++.+||+|||+++......             +.|+|||.+. ...|+.++|||||||+
T Consensus       146 lH~~~iiHrDLK~~NILl~~-~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~ksDI~SfGiv  223 (311)
T d1r0pa_         146 LASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ-TQKFTTKSDVWSFGVL  223 (311)
T ss_dssp             HHHTTCCCSCCSGGGEEECT-TCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHH-HCCCCHHHHHHHHHHH
T ss_pred             hcccCcccCCccHHhEeECC-CCCEEEecccchhhccccccccceecccccccccccChHHHh-cCCCCChhHhhhhHHH
Confidence            99999999999999999998 8999999999998654321             5699999654 5568999999999999


Q ss_pred             HHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCCCCCCCHHH
Q 005986          313 MAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKPSKRISCLD  392 (666)
Q Consensus       313 LyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~RpTa~e  392 (666)
                      +|||++|..||...           .....+...+   .....      ...+..+++++.+||.+||+.||++|||+.|
T Consensus       224 l~El~t~~~p~~~~-----------~~~~~~~~~i---~~g~~------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~e  283 (311)
T d1r0pa_         224 LWELMTRGAPPYPD-----------VNTFDITVYL---LQGRR------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE  283 (311)
T ss_dssp             HHHHHTTSCCSCC-----------------CHHHH---HTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCCCC-----------CCHHHHHHHH---HcCCC------CCCcccCcHHHHHHHHHHcCCCHhHCcCHHH
Confidence            99999977776421           1111222222   22211      1234567889999999999999999999999


Q ss_pred             HhcC
Q 005986          393 ALRH  396 (666)
Q Consensus       393 lL~H  396 (666)
                      +++|
T Consensus       284 i~~~  287 (311)
T d1r0pa_         284 LVSR  287 (311)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9987


No 60 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.4e-44  Score=373.18  Aligned_cols=258  Identities=14%  Similarity=0.138  Sum_probs=184.8

Q ss_pred             CCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchhhHHHHHHHHHHH--HHhhhccCCCCCcceEEEE
Q 005986           86 GDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVL--KKLVRRRLMYHSYSMQVHG  163 (666)
Q Consensus        86 ~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~~~~~~~rEi~iL--~~L~~~~~~~HpnIVkl~~  163 (666)
                      .+|.+.+.||+|+||    +||+|++       +|+.||||+++.... +...+|.+++  ..++      |||||++++
T Consensus         3 ~~~~l~~~iG~G~fg----~Vy~~~~-------~g~~vAvK~~~~~~~-~~~~~e~ei~~~~~~~------HpnIv~~~~   64 (303)
T d1vjya_           3 RTIVLQESIGKGRFG----EVWRGKW-------RGEEVAVKIFSSREE-RSWFREAEIYQTVMLR------HENILGFIA   64 (303)
T ss_dssp             GGEEEEEEEECCSSS----EEEEEEE-------TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCC------CTTBCCEEE
T ss_pred             cEEEEEEEEeeCCCe----EEEEEEE-------CCEEEEEEEECccch-hHHHHHHHHHHHhhCC------CCcCcceEE
Confidence            468999999999999    9999986       478999999975433 3344454444  4554      999999999


Q ss_pred             EEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHHH
Q 005986          164 YVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIGV  243 (666)
Q Consensus       164 ~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~aL  243 (666)
                      ++.... .....+|+|||||++|+|.++|++..          ++                    ...+..++.|++.||
T Consensus        65 ~~~~~~-~~~~~~~lv~Ey~~~g~L~~~l~~~~----------l~--------------------~~~~~~~~~~ia~gl  113 (303)
T d1vjya_          65 ADNKDN-GTWTQLWLVSDYHEHGSLFDYLNRYT----------VT--------------------VEGMIKLALSTASGL  113 (303)
T ss_dssp             EEEEEC-SSSEEEEEEEECCTTCBHHHHHHHCC----------BC--------------------HHHHHHHHHHHHHHH
T ss_pred             EEEeCC-CcceEEEEEEecccCCCHHHHHhcCC----------CC--------------------HHHHHHHHHHHHHHH
Confidence            997431 13347899999999999999998742          33                    345678999999999


Q ss_pred             HHHHh--------CCCCcCCCCCCceEEcCCCCceeeecccccccccC-------------CCCCCCCcccccccc----
Q 005986          244 NYLHS--------HGLAHTELRLENVHISPVDRHIKVGILGNAADFYE-------------DGPNNSSPDSNMDRR----  298 (666)
Q Consensus       244 ~yLHs--------~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~-------------~~~~y~APEvl~~~~----  298 (666)
                      +|||+        +|||||||||+|||++. ++.+||+|||+++....             +.+.|+|||++.+..    
T Consensus       114 ~~lH~~~~~~~~~~~IvHrDlKp~NILl~~-~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  192 (303)
T d1vjya_         114 AHLHMEIVGTQGKPAIAHRDLKSKNILVKK-NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH  192 (303)
T ss_dssp             HHHHCCBCSTTCBCEEECSCCCGGGEEECT-TSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTC
T ss_pred             HHHHHhhhhhccCCCeeccccCccceEEcC-CCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccC
Confidence            99996        59999999999999998 99999999999976533             237899999765432    


Q ss_pred             -CCCchhhhhhHHHHHHHHHhCCCCChhhhh---hhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHH
Q 005986          299 -QMMIAFDMRCVGFMMAKMVLRELMDPLIFT---KFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWN  374 (666)
Q Consensus       299 -~ys~~sDIWSLGviLyemltG~~PF~~~~~---~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d  374 (666)
                       .|+.++|||||||++|||++|.+||.....   .+................+   ....................++.+
T Consensus       193 ~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~~l~~  269 (303)
T d1vjya_         193 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV---CEQKLRPNIPNRWQSCEALRVMAK  269 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH---TTSCCCCCCCGGGGGCHHHHHHHH
T ss_pred             CCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHH---hccccCCCCCcccCChHHHHHHHH
Confidence             367899999999999999999988753111   1111111111112222221   111110000001111122346899


Q ss_pred             HHHHhhhcCCCCCCCHHHHhcC
Q 005986          375 LLSLLLATKPSKRISCLDALRH  396 (666)
Q Consensus       375 LI~~mL~~DP~~RpTa~elL~H  396 (666)
                      |+.+||+.||++|||+.|++++
T Consensus       270 li~~cl~~dp~~Rps~~ei~~~  291 (303)
T d1vjya_         270 IMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             HHHTTCCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcccCHhHCcCHHHHHHH
Confidence            9999999999999999999763


No 61 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=4.2e-43  Score=374.73  Aligned_cols=280  Identities=18%  Similarity=0.171  Sum_probs=199.2

Q ss_pred             ccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh-hHHHHHHHHHHHHHhhhccC-----CCCCc
Q 005986           84 NMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ-AQRRGRRAIEVLKKLVRRRL-----MYHSY  157 (666)
Q Consensus        84 ~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~-~~~~~~rEi~iL~~L~~~~~-----~~Hpn  157 (666)
                      .-++|+++++||+|+||    +||+|+++.     +|+.||||++++.. ..+...+|+.+++.+.+...     +.|+|
T Consensus        11 ~~~rY~i~~~LG~G~fg----~Vy~~~~~~-----~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~   81 (362)
T d1q8ya_          11 KDARYILVRKLGWGHFS----TVWLAKDMV-----NNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANH   81 (362)
T ss_dssp             TTTTEEEEEEEEECSSE----EEEEEEETT-----TTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTT
T ss_pred             cCCcEEEEEEEeeCCCe----EEEEEEECC-----CCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCc
Confidence            33579999999999999    999999998     89999999998643 33566899999999973321     24789


Q ss_pred             ceEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHH
Q 005986          158 SMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMR  237 (666)
Q Consensus       158 IVkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~  237 (666)
                      |+++++++...   .....+++|+++..+...........      ...                    ++...++.++.
T Consensus        82 iv~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--------------------~~~~~i~~i~~  132 (362)
T d1q8ya_          82 ILKLLDHFNHK---GPNGVHVVMVFEVLGENLLALIKKYE------HRG--------------------IPLIYVKQISK  132 (362)
T ss_dssp             BCCCCEEEEEE---ETTEEEEEEEECCCCEEHHHHHHHTT------TSC--------------------CCHHHHHHHHH
T ss_pred             eEEEEEEeeec---cccceeeeeeeccccccccccccccc------ccC--------------------CcHHHHHHHHH
Confidence            99999998732   45667777777766544333322110      112                    23466899999


Q ss_pred             HHHHHHHHHHh-CCCCcCCCCCCceEEcCCCC------ceeeecccccccccCCC------CCCCCccccccccCCCchh
Q 005986          238 DLLIGVNYLHS-HGLAHTELRLENVHISPVDR------HIKVGILGNAADFYEDG------PNNSSPDSNMDRRQMMIAF  304 (666)
Q Consensus       238 QIl~aL~yLHs-~gIvHRDLKPeNILi~~~~g------~vKL~DFGlA~~~~~~~------~~y~APEvl~~~~~ys~~s  304 (666)
                      ||+.||+|||+ +||+||||||+|||++. ++      .+||+|||.|.......      +.|+|||++. ...|+.++
T Consensus       133 qil~al~~lh~~~~IvHrDlKp~NIll~~-~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~  210 (362)
T d1q8ya_         133 QLLLGLDYMHRRCGIIHTDIKPENVLMEI-VDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLL-GAPWGCGA  210 (362)
T ss_dssp             HHHHHHHHHHHTTCEECSCCSGGGEEEEE-EETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHH-TCCCCTHH
T ss_pred             HHHHHHHHHhhhcCcccccCChhHeeeec-cCcccccceeeEeecccccccccccccccccccccChhhcc-ccCCCccc
Confidence            99999999998 89999999999999986 33      49999999997654433      6799999666 45689999


Q ss_pred             hhhhHHHHHHHHHhCCCCChhh---------hhhhhhccccCCChhhHHHHH---HHHhccC------CCCCC-------
Q 005986          305 DMRCVGFMMAKMVLRELMDPLI---------FTKFKSFLTKGIDPSCLREFL---LQVLNRN------SSSGN-------  359 (666)
Q Consensus       305 DIWSLGviLyemltG~~PF~~~---------~~~~~~~~~~g~~~~~l~~~~---~~~~~~~------~~~~~-------  359 (666)
                      ||||+||++++|++|++||...         ......+...|..+.......   .......      .....       
T Consensus       211 DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (362)
T d1q8ya_         211 DIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVL  290 (362)
T ss_dssp             HHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHH
T ss_pred             cccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhc
Confidence            9999999999999999999632         112222233344332221110   0000000      00000       


Q ss_pred             -CCcccccCCcHHHHHHHHHhhhcCCCCCCCHHHHhcCCCCCCCC
Q 005986          360 -TGFQILDRNWGAGWNLLSLLLATKPSKRISCLDALRHPFLCGPR  403 (666)
Q Consensus       360 -~~~~~~~~~s~~~~dLI~~mL~~DP~~RpTa~elL~HP~f~~~~  403 (666)
                       .........+++++|||.+||++||.+||||+|+|+||||++..
T Consensus       291 ~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         291 TEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  335 (362)
T ss_dssp             HHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             ccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCC
Confidence             01112234567899999999999999999999999999999654


No 62 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=3.4e-42  Score=358.64  Aligned_cols=248  Identities=14%  Similarity=0.060  Sum_probs=195.6

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchhhHHHHHHHHHHHHHhhhccCCCCCcceEEEEE
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQVHGY  164 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~~~  164 (666)
                      -++|++++.||+|+||    +||+|++..     +++.||||++........+.+|+++++.|+     .|+||+.++++
T Consensus         4 g~~Y~i~~~iG~G~fG----~Vy~a~~~~-----~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~-----~~~~i~~~~~~   69 (293)
T d1csna_           4 GVHYKVGRRIGEGSFG----VIFEGTNLL-----NNQQVAIKFEPRRSDAPQLRDEYRTYKLLA-----GCTGIPNVYYF   69 (293)
T ss_dssp             TTTEEEEEEEEECSSC----EEEEEEETT-----TTEEEEEEEEECCTTSCCHHHHHHHHHHTT-----TCTTCCCEEEE
T ss_pred             CCceEEEEEEecCCCe----EEEEEEECC-----CCCEEEEEEEccccCcHHHHHHHHHHHHhc-----CCCCCCEEEEE
Confidence            4689999999999999    999999998     899999999876655566789999999998     57999999999


Q ss_pred             EEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchhhHHHHHHHHHHHHHHHH
Q 005986          165 VSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASRQLRLIRLLMRDLLIGVN  244 (666)
Q Consensus       165 ~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~~~~~i~~i~~QIl~aL~  244 (666)
                      +.     .....|+||||+++ +|.+++...+.        .++                    ...+..++.|++.||+
T Consensus        70 ~~-----~~~~~~~vme~~~~-~l~~~~~~~~~--------~~~--------------------~~~~~~i~~q~~~~l~  115 (293)
T d1csna_          70 GQ-----EGLHNVLVIDLLGP-SLEDLLDLCGR--------KFS--------------------VKTVAMAAKQMLARVQ  115 (293)
T ss_dssp             EE-----ETTEEEEEEECCCC-BHHHHHHHTTT--------CCC--------------------HHHHHHHHHHHHHHHH
T ss_pred             ee-----cCCccEEEEEecCC-CHHHHHHhhcc--------chh--------------------hHHHHHHHHHHHHHHH
Confidence            98     78899999999964 99999876531        233                    3557889999999999


Q ss_pred             HHHhCCCCcCCCCCCceEEcC----CCCceeeecccccccccC----------------CCCCCCCccccccccCCCchh
Q 005986          245 YLHSHGLAHTELRLENVHISP----VDRHIKVGILGNAADFYE----------------DGPNNSSPDSNMDRRQMMIAF  304 (666)
Q Consensus       245 yLHs~gIvHRDLKPeNILi~~----~~g~vKL~DFGlA~~~~~----------------~~~~y~APEvl~~~~~ys~~s  304 (666)
                      |||++||+||||||+|||++.    .++.+||+|||+|+.+..                +.+.|||||++. ...|+.++
T Consensus       116 ~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~-~~~~~~~~  194 (293)
T d1csna_         116 SIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHL-GREQSRRD  194 (293)
T ss_dssp             HHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHHH
T ss_pred             HHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhc-CCCCChHH
Confidence            999999999999999999974    257899999999986532                237899999665 45699999


Q ss_pred             hhhhHHHHHHHHHhCCCCChhhhhhhhhccccCCChhhHHHHHHHHhccCCCCCCCCcccccCCcHHHHHHHHHhhhcCC
Q 005986          305 DMRCVGFMMAKMVLRELMDPLIFTKFKSFLTKGIDPSCLREFLLQVLNRNSSSGNTGFQILDRNWGAGWNLLSLLLATKP  384 (666)
Q Consensus       305 DIWSLGviLyemltG~~PF~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP  384 (666)
                      |||||||++|||++|++||....         ..........+.......+     ......++++++.+++..|+..+|
T Consensus       195 DiwSlG~~l~elltg~~Pf~~~~---------~~~~~~~~~~i~~~~~~~~-----~~~l~~~~p~~l~~ii~~~~~~~~  260 (293)
T d1csna_         195 DLEALGHVFMYFLRGSLPWQGLK---------AATNKQKYERIGEKKQSTP-----LRELCAGFPEEFYKYMHYARNLAF  260 (293)
T ss_dssp             HHHHHHHHHHHHHHSSCTTSSCC---------SCCHHHHHHHHHHHHHHSC-----HHHHTTTSCHHHHHHHHHHHHCCT
T ss_pred             HHHHhhHHHHHHHhCCCcCCCcc---------chhHHHHHHHHHhccCCCC-----hHHhcCCCCHHHHHHHHHHhcCCc
Confidence            99999999999999999986311         0111111111111111100     012234577899999999999999


Q ss_pred             CCCCCHHHHhc
Q 005986          385 SKRISCLDALR  395 (666)
Q Consensus       385 ~~RpTa~elL~  395 (666)
                      ++||+.+.+.+
T Consensus       261 ~~rP~y~~l~~  271 (293)
T d1csna_         261 DATPDYDYLQG  271 (293)
T ss_dssp             TCCCCHHHHHH
T ss_pred             ccCcCHHHHHH
Confidence            99999876643


No 63 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.90  E-value=2.6e-24  Score=208.45  Aligned_cols=162  Identities=17%  Similarity=0.084  Sum_probs=120.0

Q ss_pred             eEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh--------------------hHHHHHHHHHHHHHh
Q 005986           88 FKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ--------------------AQRRGRRAIEVLKKL  147 (666)
Q Consensus        88 Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~--------------------~~~~~~rEi~iL~~L  147 (666)
                      +.++++||+|+||    +||+|++.      +|+.||||+++...                    ......+|...+.++
T Consensus         2 ~~vg~~IG~G~~g----~Vy~a~~~------~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l   71 (191)
T d1zara2           2 DAIGKLMGEGKES----AVFNCYSE------KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL   71 (191)
T ss_dssp             SEEEEEEEECSSE----EEEEEEET------TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred             chhCCEeeeCcce----EEEEEECC------CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            5689999999999    99999986      58999999875311                    012235788888888


Q ss_pred             hhccCCCCCcceEEEEEEEecccCCCceEEEEEecCCCCChHHHHHhcCCcchhhhhcccChhhhhccCCCCCCCCCchh
Q 005986          148 VRRRLMYHSYSMQVHGYVSSHTTSGRSLFTLVHGYHGSFSLRHWLQQADWLPTLEATLALDEESVRKVGDDSIGGPAASR  227 (666)
Q Consensus       148 ~~~~~~~HpnIVkl~~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l~~~~~~~~l~~~~~l~Ee~a~rv~~~~~~~~~~~~  227 (666)
                      .      |++++..+++..         .+++|||++++.+.+                ++++                 
T Consensus        72 ~------~~~v~~~~~~~~---------~~lvme~~~~~~~~~----------------l~~~-----------------  103 (191)
T d1zara2          72 Q------GLAVPKVYAWEG---------NAVLMELIDAKELYR----------------VRVE-----------------  103 (191)
T ss_dssp             T------TSSSCCEEEEET---------TEEEEECCCCEEGGG----------------CCCS-----------------
T ss_pred             c------CCCcceEEEecC---------CEEEEEeeccccccc----------------hhhH-----------------
Confidence            6      999999887643         269999999855432                2222                 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccccccCCCC-CCCCccc--c--ccccCCCc
Q 005986          228 QLRLIRLLMRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDGP-NNSSPDS--N--MDRRQMMI  302 (666)
Q Consensus       228 ~~~~i~~i~~QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~~~~~~~~-~y~APEv--l--~~~~~ys~  302 (666)
                         .+..++.||+.||.|||++||+||||||+|||+++  +.++|+|||.|.....+.. .|....+  +  .-.+.|+.
T Consensus       104 ---~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~--~~~~liDFG~a~~~~~~~~~~~l~rd~~~~~~~f~r~y~~  178 (191)
T d1zara2         104 ---NPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE--EGIWIIDFPQSVEVGEEGWREILERDVRNIITYFSRTYRT  178 (191)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET--TEEEECCCTTCEETTSTTHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             ---HHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeC--CCEEEEECCCcccCCCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence               24679999999999999999999999999999995  4589999999987765431 1111100  0  11356889


Q ss_pred             hhhhhhHHHH
Q 005986          303 AFDMRCVGFM  312 (666)
Q Consensus       303 ~sDIWSLGvi  312 (666)
                      ++|+||+.--
T Consensus       179 ~~d~~s~~~~  188 (191)
T d1zara2         179 EKDINSAIDR  188 (191)
T ss_dssp             CCCHHHHHHH
T ss_pred             cccHHHHHHH
Confidence            9999998543


No 64 
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=98.27  E-value=2e-06  Score=84.43  Aligned_cols=87  Identities=9%  Similarity=-0.007  Sum_probs=62.4

Q ss_pred             cCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchh--hHHHHHHHHHHHHHhhhccCCCCCcceEEE
Q 005986           85 MGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQ--AQRRGRRAIEVLKKLVRRRLMYHSYSMQVH  162 (666)
Q Consensus        85 ~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~--~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~  162 (666)
                      ++.|++.+..+-++.+    .||+...       .++.+++|+.....  ......+|..+++.|.     .+--+.+++
T Consensus        13 ~~~~~~~~~~~G~s~~----~v~rv~~-------~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~-----~~vpvP~vl   76 (263)
T d1j7la_          13 IEKYRCVKDTEGMSPA----KVYKLVG-------ENENLYLKMTDSRYKGTTYDVEREKDMMLWLE-----GKLPVPKVL   76 (263)
T ss_dssp             HTTSEEEECSCCCSSS----EEEEEEC-------SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHT-----TTSCCCCEE
T ss_pred             hhceEEEEcCCCCCCC----cEEEEEe-------CCCeEEEEEcCCCcccchhhHHHHHHHHHHHh-----ccCCCCcEE
Confidence            4678887765545555    8998753       46778899886432  2234688999999996     344466777


Q ss_pred             EEEEecccCCCceEEEEEecCCCCChHHHH
Q 005986          163 GYVSSHTTSGRSLFTLVHGYHGSFSLRHWL  192 (666)
Q Consensus       163 ~~~~~~~~~~~~~~~LVmEy~~~GsL~~~l  192 (666)
                      .+..     .++..|+||++++|.++.+..
T Consensus        77 ~~~~-----~~~~~~lv~~~l~G~~~~~~~  101 (263)
T d1j7la_          77 HFER-----HDGWSNLLMSEADGVLCSEEY  101 (263)
T ss_dssp             EEEE-----ETTEEEEEEECCSSEEHHHHT
T ss_pred             EEEe-----cCCceEEEEEecccccccccc
Confidence            7776     567889999999997776543


No 65 
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=97.79  E-value=2.9e-05  Score=75.33  Aligned_cols=78  Identities=18%  Similarity=0.070  Sum_probs=53.8

Q ss_pred             EeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchhhHHHHHHHHHHHHHhhhccCCCCCcceEEEEEEEecccCC
Q 005986           93 RVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQVHGYVSSHTTSG  172 (666)
Q Consensus        93 ~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~~~~~~~~~~~  172 (666)
                      .+..|..+   ..||+....      .+..+++|.-... ....+.+|...|+.|...    .-.+.+++.+..     +
T Consensus        17 ~~~~G~s~---~~v~r~~~~------~~~~~vlK~~~~~-~~~~l~~E~~~l~~L~~~----gvpvP~v~~~~~-----~   77 (255)
T d1nd4a_          17 QQTIGCSD---AAVFRLSAQ------GRPVLFVKTDLSG-ALNELQDEAARLSWLATT----GVPCAAVLDVVT-----E   77 (255)
T ss_dssp             ECSCTTSS---CEEEEEECT------TSCCEEEEEECSC-TTSCHHHHHHHHHHHHTT----TCCBCCEEEEEE-----C
T ss_pred             EcCCcccC---CeEEEEEeC------CCCEEEEEeCCcc-CHhHHHHHHHHHHHHHhc----CCCCCceeeecc-----c
Confidence            44555543   178988765      4677899987643 334568899999999721    223567777776     6


Q ss_pred             CceEEEEEecCCCCChH
Q 005986          173 RSLFTLVHGYHGSFSLR  189 (666)
Q Consensus       173 ~~~~~LVmEy~~~GsL~  189 (666)
                      .+..++||++++|-++.
T Consensus        78 ~~~~~~v~~~i~G~~~~   94 (255)
T d1nd4a_          78 AGRDWLLLGEVPGQDLL   94 (255)
T ss_dssp             SSCEEEEEECCSSEETT
T ss_pred             ccceEEEEEeeeccccc
Confidence            67889999999885553


No 66 
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=97.71  E-value=6e-05  Score=78.81  Aligned_cols=79  Identities=13%  Similarity=0.118  Sum_probs=50.4

Q ss_pred             EeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecch---------hhHHHHHHHHHHHHHhhhccCCCCCcceEE
Q 005986           91 LDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISV---------QAQRRGRRAIEVLKKLVRRRLMYHSYSMQV  161 (666)
Q Consensus        91 ~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~---------~~~~~~~rEi~iL~~L~~~~~~~HpnIVkl  161 (666)
                      .+.||.|...    .||++.+..     .++.|++|.-...         ....+..+|.++|+.+...   ....+.++
T Consensus        31 ~~eig~G~~N----~vfrV~~~~-----~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~---~p~~vP~v   98 (392)
T d2pula1          31 CQEIGDGNLN----YVFHIYDQE-----HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEH---VPHLVPRV   98 (392)
T ss_dssp             EEECCSSSSE----EEEEEEC---------CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTT---CGGGSCCE
T ss_pred             EEEeCCCceE----eEEEEEeCC-----CCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhh---CCCCcceE
Confidence            5578989888    999998765     6788999975431         1123457799999988611   12346666


Q ss_pred             EEEEEecccCCCceEEEEEecCCCCCh
Q 005986          162 HGYVSSHTTSGRSLFTLVHGYHGSFSL  188 (666)
Q Consensus       162 ~~~~~~~~~~~~~~~~LVmEy~~~GsL  188 (666)
                      +.+-       ....++|||++++..+
T Consensus        99 ~~~d-------~~~~~lvmE~L~~~~~  118 (392)
T d2pula1          99 FYSD-------TEMAVTVMEDLSHLKI  118 (392)
T ss_dssp             EEEE-------TTTTEEEECCCTTSEE
T ss_pred             EEEc-------CCCCEEEEeccCCccc
Confidence            6543       2344789999987543


No 67 
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.04  E-value=0.0012  Score=68.44  Aligned_cols=86  Identities=19%  Similarity=0.246  Sum_probs=56.1

Q ss_pred             ccCCeEEEeEeccCCCCCCCceEEEEEEcCCCC--CCCCcEEEEEEecchhhHHHHHHHHHHHHHhhhccCCCCCcceEE
Q 005986           84 NMGDFKILDRVSIGLSGRADEVVFEAIVKDSNS--PLHNTKVVLRQLISVQAQRRGRRAIEVLKKLVRRRLMYHSYSMQV  161 (666)
Q Consensus        84 ~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~--~~tg~~VAIK~i~~~~~~~~~~rEi~iL~~L~~~~~~~HpnIVkl  161 (666)
                      ..+++++ +.|+.|-.-    .+|++.......  ....+.|.+++.-.........+|..+++.+.     .+.-..++
T Consensus        41 ~~~~l~v-~~l~GGltN----~~y~v~~~~~~~~~~~~~~~vllRi~g~~~~~idr~~E~~i~~~ls-----~~gl~Pkl  110 (395)
T d1nw1a_          41 PLEHLRI-SRIKGGMSN----MLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLS-----ERHLGPKL  110 (395)
T ss_dssp             CGGGEEE-EEECCCTTE----EEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHH-----HTTSSSCE
T ss_pred             CccceEE-EEcCCcccc----ceEEEEeCCCCccccCCCCcEEEEecCCcchhhHHHHHHHHHHHHH-----hCCCCCeE
Confidence            4455665 566656555    899998764211  11346788887653323344578999999997     35445688


Q ss_pred             EEEEEecccCCCceEEEEEecCCCCCh
Q 005986          162 HGYVSSHTTSGRSLFTLVHGYHGSFSL  188 (666)
Q Consensus       162 ~~~~~~~~~~~~~~~~LVmEy~~~GsL  188 (666)
                      ++++.     +    .+||||++|..|
T Consensus       111 l~~~~-----~----g~I~efi~g~~l  128 (395)
T d1nw1a_         111 YGIFS-----G----GRLEEYIPSRPL  128 (395)
T ss_dssp             EEEET-----T----EEEECCCCEEEC
T ss_pred             EEEcC-----C----ceEEEEeccccC
Confidence            88775     2    589999987444


No 68 
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=96.84  E-value=0.00098  Score=67.29  Aligned_cols=70  Identities=9%  Similarity=0.075  Sum_probs=46.2

Q ss_pred             eEEEEEEcCCCCCCCCcEEEEEEecchh-hHHHHHHHHHHHHHhhhccCCCCCcceEEE--EEEEecccCCCceEEEEEe
Q 005986          105 VVFEAIVKDSNSPLHNTKVVLRQLISVQ-AQRRGRRAIEVLKKLVRRRLMYHSYSMQVH--GYVSSHTTSGRSLFTLVHG  181 (666)
Q Consensus       105 ~Vy~a~~~~~~~~~tg~~VAIK~i~~~~-~~~~~~rEi~iL~~L~~~~~~~HpnIVkl~--~~~~~~~~~~~~~~~LVmE  181 (666)
                      .||+++..      +|+.|++|+.++.. ..+.+..|...+..|.... +..+..+..-  ..+.     ..+..+.+++
T Consensus        37 ~vy~v~~~------dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~g-ipv~~p~~~~g~~~~~-----~~~~~~~l~~  104 (325)
T d1zyla1          37 RVYQFQDE------DRRRFVVKFYRPERWTADQILEEHQFALQLVNDE-VPVAAPVAFNGQTLLN-----HQGFYFAVFP  104 (325)
T ss_dssp             EEEEECCT------TCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTT-CSBCCCCCBTTBSCEE-----ETTEEEEEEE
T ss_pred             eeEEEEcC------CCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcC-CCCCCceecCCCeeee-----eeeEEEEEEe
Confidence            89999886      58899999987643 4466788999999997331 1112111111  1112     4567889999


Q ss_pred             cCCCC
Q 005986          182 YHGSF  186 (666)
Q Consensus       182 y~~~G  186 (666)
                      +++|.
T Consensus       105 ~~~G~  109 (325)
T d1zyla1         105 SVGGR  109 (325)
T ss_dssp             CCCCE
T ss_pred             ecCCc
Confidence            99873


No 69 
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=96.65  E-value=0.0022  Score=63.93  Aligned_cols=56  Identities=9%  Similarity=0.169  Sum_probs=36.0

Q ss_pred             cccCCeEEEeEeccCCCCCCCceEEEEEEcCCCCCCCCcEEEEEEecchhhHHHHHHHHHHHHHhhh
Q 005986           83 FNMGDFKILDRVSIGLSGRADEVVFEAIVKDSNSPLHNTKVVLRQLISVQAQRRGRRAIEVLKKLVR  149 (666)
Q Consensus        83 ~~~~~Y~i~~~LG~G~fG~s~~~Vy~a~~~~~~~~~tg~~VAIK~i~~~~~~~~~~rEi~iL~~L~~  149 (666)
                      +.++...-.+.|..|---    +.|+....       +..+++|+.......+.+..|++++..|..
T Consensus        15 Y~lg~~~~~~~i~~G~~N----~ny~v~t~-------~g~yVLri~~~~~~~~~l~~~~~~l~~L~~   70 (316)
T d2ppqa1          15 YDVGSLTSYKGIAEGVEN----SNFLLHTT-------KDPLILTLYEKRVEKNDLPFFLGLMQHLAA   70 (316)
T ss_dssp             BCCCCEEEEEEECC---E----EEEEEEES-------SCCEEEEEECC---CCHHHHHHHHHHHHHH
T ss_pred             CCCCCceEeecCCCCccc----CeEEEEEC-------CCcEEEEEcCCCCCHHHHHHHHHHHHhhhh
Confidence            344555556667677655    78988764       345999998765455667889999999973


No 70 
>d1ci0a_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.28  E-value=20  Score=32.19  Aligned_cols=50  Identities=18%  Similarity=0.305  Sum_probs=35.2

Q ss_pred             CchHHHHHHHHHHhc--CC-cccccccccc-ccccccceeEEEeccCCceeE-Ee
Q 005986          613 NVDAAKNIVQEVRTQ--IP-PEMFDLSKFV-CGTYVDSRFLVLRGVNGSALL-FT  662 (666)
Q Consensus       613 ~~~~~~~~~~~~~~~--~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~  662 (666)
                      -++.-++-++|.+.-  .+ |+.+-|+=.- =.-+.++|.+|||||+...++ ||
T Consensus        12 P~~~f~~W~~~A~~~~~~~~p~a~~LATvd~~~G~P~~RtVllr~~~~~g~~fft   66 (205)
T d1ci0a_          12 PIDLFTKWFNEAKEDPRETLPEAITFSSAELPSGRVSSRILLFKELDHRGFTIYS   66 (205)
T ss_dssp             HHHHHHHHHHHHHHCSSCSCTTEEEEEEEETTTTEEEEEEEECCEECSSSEEEEE
T ss_pred             HHHHHHHHHHHHHhcCCCCCcceEEEEEeecCCCccchhhHHHHhhccceEEEEE
Confidence            345666778888653  22 6777777653 234789999999999986664 55


No 71 
>d1e7ua4 d.144.1.4 (A:726-1094) Phoshoinositide 3-kinase (PI3K), catalytic domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=23.44  E-value=49  Score=32.19  Aligned_cols=45  Identities=11%  Similarity=0.012  Sum_probs=30.9

Q ss_pred             HHHHHHHHHHHHHHHHhCCCCcCCCCCCceEEcCCCCceeeecccccc
Q 005986          232 IRLLMRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAA  279 (666)
Q Consensus       232 i~~i~~QIl~aL~yLHs~gIvHRDLKPeNILi~~~~g~vKL~DFGlA~  279 (666)
                      ...+++.++-.---.+=.||  +|=.++||||+. +|++.=+|||..-
T Consensus       200 ~~nF~~S~A~~sv~~YiLGi--gDRH~~NILi~~-~G~l~HIDFG~il  244 (369)
T d1e7ua4         200 VERFVYSCAGYCVATFVLGI--GDRHNDNIMISE-TGNLFHIDFGHIL  244 (369)
T ss_dssp             HHHHHHHHHHHHHHHHHTTC--CCCCGGGEEEET-TCCEEECCCCCC-
T ss_pred             HHHHHHHHHHHHHHHHHhcc--CCCCCCeeEEeC-CCCEEecchhhhh
Confidence            44455555433333333455  688999999997 8999999999874


Done!