Query 005991
Match_columns 666
No_of_seqs 483 out of 3142
Neff 9.6
Searched_HMMs 46136
Date Thu Mar 28 16:47:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005991.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005991hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1256 Long-chain acyl-CoA sy 100.0 1E-100 2E-105 807.7 54.0 545 56-606 53-611 (691)
2 KOG1180 Acyl-CoA synthetase [L 100.0 5.6E-97 1E-101 743.4 47.8 594 42-640 6-666 (678)
3 PLN02736 long-chain acyl-CoA s 100.0 1.1E-90 2.4E-95 787.9 63.6 603 38-640 3-638 (651)
4 PLN02387 long-chain-fatty-acid 100.0 3.9E-87 8.4E-92 760.6 60.3 595 41-640 25-686 (696)
5 PTZ00342 acyl-CoA synthetase; 100.0 3E-86 6.5E-91 747.4 61.4 549 41-604 28-652 (746)
6 PLN02614 long-chain acyl-CoA s 100.0 6.8E-86 1.5E-90 746.8 60.9 581 53-640 22-646 (666)
7 COG1022 FAA1 Long-chain acyl-C 100.0 2E-86 4.4E-91 712.4 51.9 505 76-604 13-530 (613)
8 PLN02861 long-chain-fatty-acid 100.0 4.2E-85 9E-90 741.0 62.2 582 52-640 19-643 (660)
9 PLN02430 long-chain-fatty-acid 100.0 1.3E-84 2.7E-89 735.7 61.7 593 43-640 4-643 (660)
10 PTZ00216 acyl-CoA synthetase; 100.0 9.9E-82 2.1E-86 718.1 61.0 586 41-640 30-688 (700)
11 KOG1177 Long chain fatty acid 100.0 1.2E-79 2.5E-84 608.5 40.0 495 77-640 48-584 (596)
12 KOG1176 Acyl-CoA synthetase [L 100.0 1.4E-79 3E-84 655.1 42.8 489 87-641 24-530 (537)
13 COG0318 CaiC Acyl-CoA syntheta 100.0 2E-76 4.3E-81 653.7 47.8 497 76-642 8-526 (534)
14 COG0365 Acs Acyl-coenzyme A sy 100.0 5E-73 1.1E-77 601.2 41.7 485 82-642 12-521 (528)
15 PTZ00237 acetyl-CoA synthetase 100.0 6.4E-72 1.4E-76 631.9 47.0 516 75-641 55-621 (647)
16 PLN02860 o-succinylbenzoate-Co 100.0 1.4E-71 3.1E-76 622.4 47.3 497 77-641 5-552 (563)
17 PLN02654 acetate-CoA ligase 100.0 8.5E-71 1.9E-75 624.8 48.2 525 77-656 86-655 (666)
18 PRK06334 long chain fatty acid 100.0 1.2E-70 2.5E-75 610.7 47.2 489 78-640 18-532 (539)
19 TIGR02316 propion_prpE propion 100.0 2.7E-70 5.9E-75 618.9 49.5 510 76-642 49-603 (628)
20 PRK07788 acyl-CoA synthetase; 100.0 1.5E-70 3.4E-75 613.0 46.7 488 79-640 49-548 (549)
21 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.5E-70 3.3E-75 621.9 47.3 506 76-640 54-599 (625)
22 PRK07529 AMP-binding domain pr 100.0 3.5E-70 7.7E-75 617.6 50.0 513 78-642 24-569 (632)
23 COG1021 EntE Peptide arylation 100.0 1.4E-71 3E-76 538.8 29.0 490 78-640 27-535 (542)
24 PRK00174 acetyl-CoA synthetase 100.0 1.3E-69 2.9E-74 615.1 49.2 521 77-656 65-624 (637)
25 PRK08180 feruloyl-CoA synthase 100.0 1.2E-69 2.7E-74 612.0 48.0 503 72-641 32-589 (614)
26 TIGR03443 alpha_am_amid L-amin 100.0 2.5E-69 5.5E-74 663.4 46.8 549 4-640 187-825 (1389)
27 PRK04319 acetyl-CoA synthetase 100.0 8.5E-69 1.8E-73 601.2 45.3 497 77-641 41-557 (570)
28 PRK13295 cyclohexanecarboxylat 100.0 2.5E-68 5.4E-73 594.7 48.3 492 79-640 24-541 (547)
29 PRK12467 peptide synthase; Pro 100.0 1.5E-69 3.2E-74 707.1 42.4 522 4-640 3045-3591(3956)
30 PRK08314 long-chain-fatty-acid 100.0 5.2E-68 1.1E-72 592.9 46.6 499 78-640 9-539 (546)
31 PRK05677 long-chain-fatty-acid 100.0 9.6E-68 2.1E-72 591.7 48.7 500 77-639 22-553 (562)
32 PRK13382 acyl-CoA synthetase; 100.0 8.4E-68 1.8E-72 588.6 47.3 482 79-639 43-536 (537)
33 PRK10524 prpE propionyl-CoA sy 100.0 8.7E-68 1.9E-72 599.7 47.6 523 77-656 51-618 (629)
34 PRK07769 long-chain-fatty-acid 100.0 7.9E-68 1.7E-72 600.0 47.2 507 76-656 18-624 (631)
35 PRK12582 acyl-CoA synthetase; 100.0 6.7E-68 1.5E-72 599.0 45.9 515 56-635 26-593 (624)
36 PLN02574 4-coumarate--CoA liga 100.0 1.2E-67 2.5E-72 590.5 45.2 488 81-640 43-551 (560)
37 PLN02246 4-coumarate--CoA liga 100.0 5E-67 1.1E-71 583.2 49.7 492 76-640 20-533 (537)
38 TIGR01217 ac_ac_CoA_syn acetoa 100.0 2.9E-67 6.2E-72 595.0 48.3 492 91-641 96-624 (652)
39 PRK03584 acetoacetyl-CoA synth 100.0 4.3E-67 9.3E-72 596.1 49.1 499 80-640 87-622 (655)
40 PRK12467 peptide synthase; Pro 100.0 1.1E-67 2.3E-72 689.8 47.7 525 4-640 1524-2082(3956)
41 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 1.5E-66 3.3E-71 579.4 49.7 491 79-639 22-538 (538)
42 PRK06060 acyl-CoA synthetase; 100.0 1.5E-67 3.3E-72 604.4 42.6 465 79-640 4-489 (705)
43 PRK09274 peptide synthase; Pro 100.0 4.5E-67 9.7E-72 585.7 45.2 491 79-640 6-545 (552)
44 PRK08043 bifunctional acyl-[ac 100.0 1.7E-67 3.7E-72 604.4 42.4 483 77-640 202-710 (718)
45 PRK10252 entF enterobactin syn 100.0 1.6E-67 3.5E-72 645.3 44.6 522 4-640 410-964 (1296)
46 PRK05691 peptide synthase; Val 100.0 7.8E-68 1.7E-72 697.1 44.8 526 4-640 3670-4225(4334)
47 PRK06155 crotonobetaine/carnit 100.0 1.6E-66 3.5E-71 578.6 48.3 489 77-640 19-521 (542)
48 PRK05852 acyl-CoA synthetase; 100.0 1.3E-66 2.9E-71 579.3 46.5 496 75-640 12-529 (534)
49 PRK05857 acyl-CoA synthetase; 100.0 3.1E-67 6.6E-72 584.5 41.3 493 77-642 12-530 (540)
50 PRK05620 long-chain-fatty-acid 100.0 2.5E-66 5.5E-71 582.0 48.6 503 79-640 10-554 (576)
51 PRK07656 long-chain-fatty-acid 100.0 2.3E-66 5.1E-71 575.4 47.6 494 77-639 3-512 (513)
52 PRK12316 peptide synthase; Pro 100.0 2E-67 4.3E-72 697.7 46.3 523 4-640 461-1003(5163)
53 PTZ00297 pantothenate kinase; 100.0 2.1E-65 4.5E-70 598.4 57.0 495 67-606 415-920 (1452)
54 PRK12476 putative fatty-acid-- 100.0 1.1E-66 2.3E-71 588.3 43.9 493 76-640 31-603 (612)
55 PRK08008 caiC putative crotono 100.0 4.8E-66 1E-70 573.1 48.2 496 77-638 5-517 (517)
56 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 5.7E-66 1.2E-70 573.3 48.5 488 77-638 21-527 (527)
57 PRK12316 peptide synthase; Pro 100.0 4.1E-67 8.8E-72 694.7 46.3 516 4-640 3007-3541(5163)
58 PLN03102 acyl-activating enzym 100.0 6.1E-66 1.3E-70 577.9 46.6 496 79-642 14-553 (579)
59 PRK06839 acyl-CoA synthetase; 100.0 5.9E-66 1.3E-70 569.7 45.4 476 79-640 2-492 (496)
60 PRK05605 long-chain-fatty-acid 100.0 1.7E-65 3.7E-70 575.4 49.3 499 79-640 32-566 (573)
61 PRK03640 O-succinylbenzoic aci 100.0 7.6E-66 1.6E-70 566.7 45.2 468 78-640 1-479 (483)
62 PRK12492 long-chain-fatty-acid 100.0 1.5E-65 3.2E-70 574.0 46.4 500 78-640 23-561 (562)
63 PRK07008 long-chain-fatty-acid 100.0 3.5E-65 7.5E-70 568.1 48.9 496 79-640 10-530 (539)
64 PRK07470 acyl-CoA synthetase; 100.0 1.8E-65 4E-70 569.8 46.6 488 77-640 5-515 (528)
65 PLN02330 4-coumarate--CoA liga 100.0 1.3E-65 2.8E-70 572.7 45.5 506 55-640 11-538 (546)
66 PRK07638 acyl-CoA synthetase; 100.0 1.2E-65 2.5E-70 565.5 44.3 469 79-640 1-478 (487)
67 TIGR03098 ligase_PEP_1 acyl-Co 100.0 2.3E-65 5E-70 567.6 46.7 490 80-639 1-514 (515)
68 PRK07786 long-chain-fatty-acid 100.0 2.2E-65 4.9E-70 570.3 45.7 489 77-640 15-521 (542)
69 PRK06087 short chain acyl-CoA 100.0 5.1E-65 1.1E-69 568.5 47.3 491 79-640 23-533 (547)
70 PRK08315 AMP-binding domain pr 100.0 7.7E-65 1.7E-69 568.9 46.9 496 77-641 14-549 (559)
71 PRK07514 malonyl-CoA synthase; 100.0 1.1E-64 2.3E-69 560.6 46.8 484 79-640 3-498 (504)
72 PRK12583 acyl-CoA synthetase; 100.0 1.3E-64 2.8E-69 567.2 48.0 492 79-640 18-549 (558)
73 PRK06187 long-chain-fatty-acid 100.0 1.6E-64 3.4E-69 561.8 47.3 496 77-640 4-516 (521)
74 PLN03052 acetate--CoA ligase; 100.0 1.6E-64 3.5E-69 574.8 47.7 501 81-640 177-718 (728)
75 PRK05851 long-chain-fatty-acid 100.0 2E-65 4.3E-70 568.0 39.3 467 81-639 4-518 (525)
76 PRK06145 acyl-CoA synthetase; 100.0 1.9E-64 4E-69 557.7 45.4 479 78-640 1-494 (497)
77 PRK10946 entE enterobactin syn 100.0 1.9E-64 4.1E-69 561.9 45.6 488 78-640 24-529 (536)
78 PRK05691 peptide synthase; Val 100.0 2.4E-65 5.2E-70 673.6 44.8 520 4-640 1083-1625(4334)
79 PRK08316 acyl-CoA synthetase; 100.0 3.6E-64 7.8E-69 559.2 46.3 493 77-640 9-516 (523)
80 PRK07059 Long-chain-fatty-acid 100.0 7.9E-64 1.7E-68 560.0 48.8 501 77-640 21-555 (557)
81 PRK06164 acyl-CoA synthetase; 100.0 5.8E-64 1.2E-68 559.3 47.0 497 75-640 6-529 (540)
82 PRK08633 2-acyl-glycerophospho 100.0 1.5E-64 3.3E-69 612.8 45.4 497 76-640 612-1140(1146)
83 PLN02479 acetate-CoA ligase 100.0 6.5E-64 1.4E-68 561.1 46.2 502 79-640 20-555 (567)
84 PRK06018 putative acyl-CoA syn 100.0 1.5E-63 3.3E-68 555.5 48.3 498 78-640 9-531 (542)
85 PRK07867 acyl-CoA synthetase; 100.0 1.1E-63 2.4E-68 553.8 46.6 489 77-654 3-515 (529)
86 TIGR02262 benz_CoA_lig benzoat 100.0 1.5E-63 3.2E-68 551.8 47.5 487 78-639 3-507 (508)
87 PRK13388 acyl-CoA synthetase; 100.0 8.9E-64 1.9E-68 556.4 44.8 490 79-656 3-517 (540)
88 PRK06188 acyl-CoA synthetase; 100.0 1.5E-63 3.3E-68 553.8 46.5 486 78-640 11-514 (524)
89 PRK09088 acyl-CoA synthetase; 100.0 1.2E-63 2.6E-68 549.8 42.7 463 86-640 2-482 (488)
90 PRK08279 long-chain-acyl-CoA s 100.0 1.7E-63 3.6E-68 561.9 44.7 490 77-640 35-561 (600)
91 TIGR03205 pimA dicarboxylate-- 100.0 1.2E-62 2.6E-67 548.5 49.7 498 77-638 19-541 (541)
92 PRK08751 putative long-chain f 100.0 3.9E-63 8.4E-68 555.0 45.8 500 78-640 24-557 (560)
93 PRK07787 acyl-CoA synthetase; 100.0 2.5E-63 5.4E-68 544.3 41.7 449 88-639 9-469 (471)
94 PRK06710 long-chain-fatty-acid 100.0 9.6E-63 2.1E-67 551.9 46.0 500 77-640 22-552 (563)
95 PRK13383 acyl-CoA synthetase; 100.0 2.3E-62 4.9E-67 543.0 45.4 469 77-638 33-515 (516)
96 PRK06178 acyl-CoA synthetase; 100.0 2.6E-62 5.5E-67 549.0 46.3 498 79-640 33-562 (567)
97 TIGR01734 D-ala-DACP-lig D-ala 100.0 8E-63 1.7E-67 545.4 41.5 471 80-640 1-499 (502)
98 PRK13390 acyl-CoA synthetase; 100.0 1.4E-62 3.1E-67 542.9 42.7 474 87-638 5-501 (501)
99 PRK06814 acylglycerophosphoeth 100.0 2.8E-62 6E-67 590.9 46.6 493 76-644 628-1133(1140)
100 PRK08162 acyl-CoA synthetase; 100.0 1.9E-61 4.2E-66 539.6 48.3 497 79-640 18-536 (545)
101 PRK07445 O-succinylbenzoic aci 100.0 1.3E-62 2.9E-67 533.0 37.2 412 114-640 20-444 (452)
102 PRK09192 acyl-CoA synthetase; 100.0 7.7E-62 1.7E-66 545.7 41.9 495 75-652 17-572 (579)
103 PRK08974 long-chain-fatty-acid 100.0 6.2E-61 1.3E-65 537.0 48.4 499 78-640 22-552 (560)
104 PRK04813 D-alanine--poly(phosp 100.0 2.4E-61 5.2E-66 533.9 44.3 470 79-640 2-500 (503)
105 PRK13391 acyl-CoA synthetase; 100.0 4.2E-61 9E-66 532.4 46.2 481 86-639 4-505 (511)
106 PRK07868 acyl-CoA synthetase; 100.0 9.2E-62 2E-66 569.8 43.1 530 5-642 401-957 (994)
107 PRK07798 acyl-CoA synthetase; 100.0 1.6E-60 3.5E-65 531.2 50.8 491 80-640 4-529 (533)
108 PRK09029 O-succinylbenzoic aci 100.0 1.3E-61 2.9E-66 528.9 39.7 433 86-640 10-450 (458)
109 PRK05850 acyl-CoA synthetase; 100.0 1.6E-60 3.4E-65 535.8 42.6 490 80-640 2-565 (578)
110 PLN03051 acyl-activating enzym 100.0 3.5E-61 7.6E-66 530.3 35.4 446 145-641 1-489 (499)
111 PRK08276 long-chain-fatty-acid 100.0 8.2E-60 1.8E-64 521.2 43.1 462 112-640 10-493 (502)
112 PRK12406 long-chain-fatty-acid 100.0 1.6E-59 3.5E-64 519.6 43.9 469 112-639 10-499 (509)
113 KOG1175 Acyl-CoA synthetase [L 100.0 7.3E-60 1.6E-64 500.6 34.9 509 81-656 66-615 (626)
114 TIGR01923 menE O-succinylbenzo 100.0 4.6E-59 1E-63 506.0 38.5 427 115-637 1-436 (436)
115 PRK07768 long-chain-fatty-acid 100.0 1E-57 2.2E-62 509.5 42.1 478 79-639 2-541 (545)
116 PF00501 AMP-binding: AMP-bind 100.0 2.5E-58 5.4E-63 497.3 33.5 401 85-550 1-416 (417)
117 PRK08308 acyl-CoA synthetase; 100.0 8.3E-57 1.8E-61 484.2 40.2 389 113-636 8-406 (414)
118 KOG1179 Very long-chain acyl-C 100.0 1.9E-54 4.2E-59 438.3 39.0 509 77-655 75-633 (649)
119 TIGR01733 AA-adenyl-dom amino 100.0 2.7E-54 5.8E-59 464.5 37.2 389 115-576 1-408 (408)
120 COG1020 EntF Non-ribosomal pep 100.0 5.3E-45 1.1E-49 414.9 40.1 454 4-569 181-642 (642)
121 PRK07824 O-succinylbenzoic aci 100.0 2.7E-46 5.8E-51 394.6 26.8 307 253-640 32-354 (358)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 7E-39 1.5E-43 336.6 22.7 278 256-633 95-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 2.8E-34 6E-39 309.3 27.2 314 253-636 72-419 (422)
124 KOG1178 Non-ribosomal peptide 100.0 6.2E-31 1.3E-35 293.3 19.2 497 77-640 34-576 (1032)
125 KOG3628 Predicted AMP-binding 100.0 2.9E-28 6.2E-33 262.9 33.5 515 79-654 770-1359(1363)
126 TIGR03089 conserved hypothetic 99.9 6.6E-26 1.4E-30 220.7 24.3 222 85-345 2-227 (227)
127 TIGR03335 F390_ftsA coenzyme F 99.9 1.3E-25 2.9E-30 242.1 26.1 258 254-572 84-359 (445)
128 COG1541 PaaK Coenzyme F390 syn 99.9 5E-23 1.1E-27 210.5 21.7 279 254-592 88-383 (438)
129 PRK09188 serine/threonine prot 99.8 5.9E-19 1.3E-23 181.6 7.0 108 520-641 207-326 (365)
130 KOG3628 Predicted AMP-binding 99.7 9E-16 1.9E-20 167.2 21.9 441 77-578 92-636 (1363)
131 TIGR02304 aden_form_hyp probab 99.7 5.8E-15 1.3E-19 155.7 23.0 256 258-591 101-377 (430)
132 PF04443 LuxE: Acyl-protein sy 98.9 1.6E-07 3.4E-12 97.4 19.5 231 254-548 87-352 (365)
133 PF13193 AMP-binding_C: AMP-bi 98.8 1.2E-09 2.6E-14 85.8 0.5 66 560-631 1-73 (73)
134 PF03321 GH3: GH3 auxin-respon 98.3 2.4E-05 5.1E-10 86.0 16.5 158 411-591 267-449 (528)
135 PLN02249 indole-3-acetic acid- 98.2 0.00018 3.9E-09 79.4 22.0 132 413-567 307-456 (597)
136 PLN02247 indole-3-acetic acid- 97.6 0.0026 5.7E-08 69.7 17.8 137 411-567 293-463 (606)
137 PLN02620 indole-3-acetic acid- 97.4 0.0052 1.1E-07 67.3 17.1 137 411-567 304-469 (612)
138 COG1541 PaaK Coenzyme F390 syn 94.4 0.26 5.7E-06 51.9 9.9 92 112-204 108-201 (438)
139 PF14535 AMP-binding_C_2: AMP- 93.6 0.028 6E-07 46.4 0.9 40 553-592 1-43 (96)
140 TIGR02155 PA_CoA_ligase phenyl 88.0 5.8 0.00013 42.7 12.2 96 105-201 84-183 (422)
141 TIGR03335 F390_ftsA coenzyme F 87.1 7.5 0.00016 42.2 12.5 92 105-199 95-190 (445)
142 PRK07656 long-chain-fatty-acid 77.0 32 0.0007 37.7 13.0 105 92-202 164-272 (513)
143 PRK06187 long-chain-fatty-acid 76.3 44 0.00095 36.7 13.8 116 94-215 167-289 (521)
144 TIGR01923 menE O-succinylbenzo 74.0 43 0.00092 35.8 12.7 114 93-214 110-226 (436)
145 PF00501 AMP-binding: AMP-bind 72.9 54 0.0012 34.8 13.0 120 92-217 153-287 (417)
146 PRK12583 acyl-CoA synthetase; 72.6 65 0.0014 35.9 14.1 103 92-199 199-305 (558)
147 PF01037 AsnC_trans_reg: AsnC 70.2 16 0.00036 27.8 6.1 54 548-603 3-56 (74)
148 PRK08315 AMP-binding domain pr 69.5 78 0.0017 35.2 13.9 102 93-199 198-303 (559)
149 PRK06334 long chain fatty acid 69.0 1.1E+02 0.0023 34.1 14.7 119 92-215 181-307 (539)
150 TIGR01733 AA-adenyl-dom amino 68.8 1.2E+02 0.0025 32.0 14.5 121 92-217 118-244 (408)
151 PRK04319 acetyl-CoA synthetase 68.7 77 0.0017 35.5 13.6 119 93-216 204-332 (570)
152 PLN03051 acyl-activating enzym 67.2 57 0.0012 35.9 11.9 104 93-201 118-224 (499)
153 TIGR03089 conserved hypothetic 63.7 41 0.00088 32.6 8.8 54 131-186 171-226 (227)
154 PRK08308 acyl-CoA synthetase; 63.3 1.6E+02 0.0035 31.2 14.3 117 92-214 99-219 (414)
155 PRK03584 acetoacetyl-CoA synth 60.9 1.1E+02 0.0023 35.1 13.1 120 93-216 262-392 (655)
156 PRK07638 acyl-CoA synthetase; 60.2 1.4E+02 0.0031 32.4 13.4 103 94-202 143-248 (487)
157 PRK07788 acyl-CoA synthetase; 59.9 1E+02 0.0022 34.2 12.4 117 94-216 207-332 (549)
158 PLN02860 o-succinylbenzoate-Co 59.5 1.7E+02 0.0036 32.7 14.0 117 92-214 170-295 (563)
159 TIGR03098 ligase_PEP_1 acyl-Co 56.2 1.2E+02 0.0026 33.2 12.1 93 105-201 170-265 (515)
160 PLN03052 acetate--CoA ligase; 56.2 1E+02 0.0022 35.8 11.8 118 93-215 355-479 (728)
161 PRK13295 cyclohexanecarboxylat 56.2 2.1E+02 0.0045 31.7 14.1 117 92-214 195-319 (547)
162 PRK07008 long-chain-fatty-acid 54.8 1.3E+02 0.0028 33.4 12.1 106 92-201 174-283 (539)
163 COG0399 WecE Predicted pyridox 53.2 57 0.0012 34.2 8.0 78 123-204 59-146 (374)
164 PRK08043 bifunctional acyl-[ac 52.2 2.3E+02 0.0051 32.8 14.0 118 92-214 363-486 (718)
165 PRK06188 acyl-CoA synthetase; 51.3 2.3E+02 0.0049 31.2 13.3 103 93-201 167-271 (524)
166 PLN02654 acetate-CoA ligase 50.5 2.1E+02 0.0045 32.9 13.1 119 93-216 274-406 (666)
167 PRK05852 acyl-CoA synthetase; 50.2 3.3E+02 0.0071 30.0 14.4 94 105-201 185-283 (534)
168 TIGR02316 propion_prpE propion 48.9 1.9E+02 0.004 32.9 12.3 120 93-217 231-364 (628)
169 TIGR01217 ac_ac_CoA_syn acetoa 48.5 1.9E+02 0.0041 33.1 12.4 102 94-199 264-370 (652)
170 PF01041 DegT_DnrJ_EryC1: DegT 48.2 37 0.0008 35.6 6.0 89 80-191 25-119 (363)
171 PRK09274 peptide synthase; Pro 48.1 1.4E+02 0.0031 33.1 11.1 97 254-351 19-121 (552)
172 PRK03640 O-succinylbenzoic aci 48.0 2.7E+02 0.0059 30.1 13.1 103 93-201 140-245 (483)
173 PLN03102 acyl-activating enzym 44.4 1.5E+02 0.0033 33.3 10.6 93 254-357 27-125 (579)
174 PRK07787 acyl-CoA synthetase; 43.1 4E+02 0.0086 28.8 13.4 116 92-214 126-248 (471)
175 PTZ00237 acetyl-CoA synthetase 41.5 2.2E+02 0.0047 32.6 11.4 93 255-351 75-172 (647)
176 TIGR01734 D-ala-DACP-lig D-ala 41.3 4.2E+02 0.0092 28.7 13.4 104 92-200 139-247 (502)
177 TIGR02188 Ac_CoA_lig_AcsA acet 40.7 2E+02 0.0042 32.7 10.9 96 254-353 70-170 (625)
178 PRK07470 acyl-CoA synthetase; 40.4 5.1E+02 0.011 28.4 14.0 107 92-201 161-270 (528)
179 TIGR03208 cyc_hxne_CoA_lg cycl 40.4 5E+02 0.011 28.6 13.9 117 92-214 193-317 (538)
180 TIGR02262 benz_CoA_lig benzoat 40.2 2.4E+02 0.0051 30.9 11.2 103 92-198 159-265 (508)
181 TIGR02370 pyl_corrinoid methyl 40.0 3.3E+02 0.007 25.7 11.0 55 299-353 86-145 (197)
182 PRK06164 acyl-CoA synthetase; 39.7 3.1E+02 0.0067 30.3 12.1 104 92-201 179-285 (540)
183 PRK05620 long-chain-fatty-acid 39.6 5.4E+02 0.012 28.7 14.1 106 92-200 179-287 (576)
184 PLN02246 4-coumarate--CoA liga 39.4 2.1E+02 0.0045 31.7 10.6 96 254-357 36-136 (537)
185 PLN02736 long-chain acyl-CoA s 39.3 3.1E+02 0.0066 31.4 12.2 103 254-359 57-166 (651)
186 TIGR02275 DHB_AMP_lig 2,3-dihy 38.9 5.3E+02 0.011 28.3 13.8 117 92-214 181-306 (527)
187 COG0318 CaiC Acyl-CoA syntheta 38.4 4.9E+02 0.011 28.8 13.4 108 92-202 169-281 (534)
188 PRK00174 acetyl-CoA synthetase 37.8 2.3E+02 0.005 32.2 10.9 96 254-353 80-180 (637)
189 PF00818 Ice_nucleation: Ice n 36.5 14 0.00031 19.0 0.3 9 442-450 1-9 (16)
190 TIGR02379 ECA_wecE TDP-4-keto- 36.2 1.2E+02 0.0026 32.0 7.5 60 129-192 62-126 (376)
191 KOG1176 Acyl-CoA synthetase [L 36.1 1.3E+02 0.0029 33.3 8.0 87 273-360 43-136 (537)
192 PRK13383 acyl-CoA synthetase; 36.0 4.9E+02 0.011 28.5 12.9 110 105-215 183-300 (516)
193 PRK06839 acyl-CoA synthetase; 35.8 2.9E+02 0.0064 29.9 11.0 94 254-357 15-114 (496)
194 cd01445 TST_Repeats Thiosulfat 35.4 1.1E+02 0.0025 26.8 6.2 45 124-168 81-128 (138)
195 PRK07514 malonyl-CoA synthase; 35.1 2.8E+02 0.0061 30.2 10.8 85 273-358 26-115 (504)
196 PRK08633 2-acyl-glycerophospho 35.1 5.3E+02 0.011 31.7 14.2 105 92-201 780-888 (1146)
197 PRK05857 acyl-CoA synthetase; 35.0 2.1E+02 0.0045 31.7 9.8 92 254-353 27-123 (540)
198 PRK08316 acyl-CoA synthetase; 35.0 2.7E+02 0.0059 30.4 10.7 84 274-358 35-123 (523)
199 PRK06155 crotonobetaine/carnit 34.5 2.2E+02 0.0048 31.5 9.9 83 275-358 46-133 (542)
200 PRK10946 entE enterobactin syn 34.3 5.9E+02 0.013 28.0 13.3 104 92-201 180-288 (536)
201 PRK11706 TDP-4-oxo-6-deoxy-D-g 34.2 1.4E+02 0.0031 31.3 7.8 58 130-191 63-125 (375)
202 KOG1177 Long chain fatty acid 34.1 5.7E+02 0.012 27.9 11.6 104 91-199 231-338 (596)
203 PF06543 Lac_bphage_repr: Lact 34.1 32 0.00069 23.7 1.7 26 414-439 22-47 (49)
204 PRK13388 acyl-CoA synthetase; 33.7 2.9E+02 0.0063 30.6 10.6 82 275-357 26-113 (540)
205 PRK08314 long-chain-fatty-acid 33.5 2.7E+02 0.0059 30.7 10.4 84 275-359 35-124 (546)
206 PRK10252 entF enterobactin syn 33.4 5.5E+02 0.012 32.2 14.1 121 92-217 596-727 (1296)
207 COG2236 Predicted phosphoribos 33.3 78 0.0017 29.7 4.9 34 111-144 4-37 (192)
208 TIGR03590 PseG pseudaminic aci 33.1 3.5E+02 0.0076 27.0 10.1 89 122-218 19-112 (279)
209 TIGR02372 4_coum_CoA_lig 4-cou 33.1 6.1E+02 0.013 26.8 15.5 124 79-210 80-209 (386)
210 PRK07798 acyl-CoA synthetase; 32.7 3.3E+02 0.0071 29.8 10.9 84 274-358 27-115 (533)
211 PRK08008 caiC putative crotono 32.2 3.6E+02 0.0079 29.4 11.1 99 254-357 20-123 (517)
212 PRK06814 acylglycerophosphoeth 32.0 7.5E+02 0.016 30.5 14.7 118 92-214 791-914 (1140)
213 PRK12406 long-chain-fatty-acid 32.0 6.4E+02 0.014 27.4 13.0 107 92-201 150-259 (509)
214 PRK07529 AMP-binding domain pr 31.5 2.8E+02 0.006 31.6 10.2 95 254-351 38-137 (632)
215 PRK13391 acyl-CoA synthetase; 30.9 3.7E+02 0.0081 29.3 10.9 96 254-357 10-110 (511)
216 PRK08279 long-chain-acyl-CoA s 30.8 5.3E+02 0.011 28.9 12.3 101 93-199 198-302 (600)
217 PLN02565 cysteine synthase 30.7 3.7E+02 0.008 27.6 9.9 72 123-194 50-122 (322)
218 PLN02330 4-coumarate--CoA liga 30.4 2.6E+02 0.0056 31.0 9.6 96 254-357 41-141 (546)
219 PLN02574 4-coumarate--CoA liga 30.0 3.7E+02 0.008 29.9 10.7 96 254-357 52-153 (560)
220 COG4009 Uncharacterized protei 29.6 2.7E+02 0.0058 21.7 6.2 64 114-188 10-76 (88)
221 PRK06060 acyl-CoA synthetase; 29.5 5.2E+02 0.011 29.8 12.2 121 93-217 144-270 (705)
222 PRK07059 Long-chain-fatty-acid 29.4 3.3E+02 0.0072 30.2 10.2 92 254-355 36-132 (557)
223 PRK05677 long-chain-fatty-acid 29.3 3.4E+02 0.0073 30.2 10.2 92 254-355 37-134 (562)
224 PRK02261 methylaspartate mutas 29.0 4E+02 0.0086 23.4 8.7 45 307-351 15-62 (137)
225 PRK03317 histidinol-phosphate 28.8 5.8E+02 0.012 26.5 11.4 54 136-192 110-167 (368)
226 PRK06087 short chain acyl-CoA 28.6 8.2E+02 0.018 26.9 13.3 98 92-195 185-286 (547)
227 PRK13382 acyl-CoA synthetase; 28.3 6.6E+02 0.014 27.7 12.3 93 105-201 205-300 (537)
228 PRK11658 UDP-4-amino-4-deoxy-L 28.0 2.2E+02 0.0048 29.9 8.0 63 124-190 59-126 (379)
229 PF00290 Trp_syntA: Tryptophan 27.9 6.1E+02 0.013 25.1 11.4 88 79-185 72-164 (259)
230 PLN00175 aminotransferase fami 27.7 7.6E+02 0.017 26.2 12.3 53 135-191 136-193 (413)
231 PRK10524 prpE propionyl-CoA sy 27.3 4.7E+02 0.01 29.6 11.1 95 254-352 66-165 (629)
232 PLN02556 cysteine synthase/L-3 27.2 6E+02 0.013 26.7 10.8 62 132-193 103-165 (368)
233 PRK09088 acyl-CoA synthetase; 27.2 4.3E+02 0.0094 28.6 10.5 92 254-353 8-104 (488)
234 KOG0331 ATP-dependent RNA heli 27.0 2.7E+02 0.0058 30.6 8.2 88 124-216 327-417 (519)
235 PRK15407 lipopolysaccharide bi 26.8 2.2E+02 0.0048 30.7 7.8 57 132-192 105-166 (438)
236 cd01519 RHOD_HSP67B2 Member of 26.3 2.6E+02 0.0056 22.7 6.6 52 113-164 37-92 (106)
237 PRK08276 long-chain-fatty-acid 26.3 3.7E+02 0.0081 29.2 9.8 82 275-357 11-97 (502)
238 TIGR03588 PseC UDP-4-keto-6-de 26.2 2.9E+02 0.0063 29.0 8.6 65 124-191 55-127 (380)
239 PLN02479 acetate-CoA ligase 25.7 5.3E+02 0.011 28.7 11.0 94 254-357 33-131 (567)
240 PRK11761 cysM cysteine synthas 25.7 4.7E+02 0.01 26.4 9.6 70 123-193 47-117 (296)
241 PLN02614 long-chain acyl-CoA s 25.6 7.6E+02 0.016 28.3 12.4 83 274-357 78-165 (666)
242 TIGR01139 cysK cysteine syntha 25.5 4.9E+02 0.011 26.2 9.7 66 129-195 47-113 (298)
243 PF01436 NHL: NHL repeat; Int 25.5 91 0.002 18.7 2.6 18 532-549 9-26 (28)
244 PRK05605 long-chain-fatty-acid 25.4 3.3E+02 0.0073 30.3 9.4 82 275-357 57-143 (573)
245 COG0436 Aspartate/tyrosine/aro 25.2 7.9E+02 0.017 26.0 11.5 153 123-297 99-271 (393)
246 PRK08751 putative long-chain f 24.4 4.6E+02 0.01 29.0 10.2 94 254-357 38-137 (560)
247 PRK05850 acyl-CoA synthetase; 23.5 6.4E+02 0.014 28.0 11.2 101 254-358 14-124 (578)
248 TIGR03443 alpha_am_amid L-amin 23.4 3.5E+02 0.0077 34.2 9.9 97 254-351 249-350 (1389)
249 PRK13390 acyl-CoA synthetase; 23.3 5.8E+02 0.013 27.7 10.6 92 254-353 10-106 (501)
250 PRK06108 aspartate aminotransf 23.3 7.9E+02 0.017 25.5 11.3 53 135-191 105-164 (382)
251 COG1022 FAA1 Long-chain acyl-C 23.2 6.8E+02 0.015 28.4 10.8 107 90-202 187-296 (613)
252 PRK04837 ATP-dependent RNA hel 23.1 9.3E+02 0.02 25.6 12.2 93 115-215 235-330 (423)
253 PRK02731 histidinol-phosphate 23.1 8.4E+02 0.018 25.1 14.4 54 135-192 105-161 (367)
254 PF11142 DUF2917: Protein of u 22.9 2.6E+02 0.0056 20.8 5.2 35 493-542 24-58 (63)
255 PRK09082 methionine aminotrans 22.5 8.7E+02 0.019 25.4 11.4 53 135-191 112-169 (386)
256 TIGR01136 cysKM cysteine synth 22.1 6.1E+02 0.013 25.5 9.7 66 128-194 47-113 (299)
257 cd06410 PB1_UP2 Uncharacterize 22.1 4E+02 0.0087 21.9 6.6 73 528-603 7-82 (97)
258 PRK12492 long-chain-fatty-acid 22.0 4.3E+02 0.0092 29.4 9.3 81 274-355 48-134 (562)
259 PRK12476 putative fatty-acid-- 22.0 8.7E+02 0.019 27.3 12.0 101 254-357 47-156 (612)
260 PRK12414 putative aminotransfe 22.0 9.2E+02 0.02 25.2 13.2 53 135-191 111-168 (384)
261 PRK08162 acyl-CoA synthetase; 21.8 4.1E+02 0.0089 29.3 9.1 83 275-358 43-130 (545)
262 PRK12582 acyl-CoA synthetase; 21.5 4.7E+02 0.01 29.6 9.6 94 254-351 62-165 (624)
263 TIGR00936 ahcY adenosylhomocys 21.5 7.5E+02 0.016 26.4 10.2 57 136-192 30-88 (406)
264 PLN02861 long-chain-fatty-acid 21.5 5.6E+02 0.012 29.3 10.3 83 274-357 76-163 (660)
265 PRK10877 protein disulfide iso 21.4 1.7E+02 0.0036 28.5 5.0 60 527-592 55-116 (232)
266 KOG0023 Alcohol dehydrogenase, 21.2 6.5E+02 0.014 25.8 9.0 74 129-205 173-246 (360)
267 PRK11179 DNA-binding transcrip 21.2 2.4E+02 0.0051 25.3 5.7 44 559-603 84-127 (153)
268 PRK06702 O-acetylhomoserine am 21.2 4.3E+02 0.0093 28.5 8.6 55 135-191 97-153 (432)
269 PRK11493 sseA 3-mercaptopyruva 21.1 1.5E+02 0.0032 29.7 4.9 57 112-168 200-261 (281)
270 COG1504 Uncharacterized conser 20.9 4.5E+02 0.0098 22.1 6.4 69 526-605 20-90 (121)
271 cd01449 TST_Repeat_2 Thiosulfa 20.9 2.2E+02 0.0047 23.8 5.2 40 125-164 65-104 (118)
272 COG0365 Acs Acyl-coenzyme A sy 20.9 5.5E+02 0.012 28.5 9.4 96 257-357 25-126 (528)
273 PHA02885 putative interleukin 20.7 71 0.0015 26.0 1.8 40 521-566 48-87 (135)
274 COG1111 MPH1 ERCC4-like helica 20.5 1.1E+03 0.025 25.7 11.7 108 72-219 344-454 (542)
275 cd07050 BMC_EutL_repeat2 ethan 20.3 2E+02 0.0044 22.5 4.1 42 127-168 3-45 (87)
276 PRK11169 leucine-responsive tr 20.3 2.3E+02 0.005 25.7 5.5 45 558-603 90-134 (164)
277 PLN02387 long-chain-fatty-acid 20.2 5.9E+02 0.013 29.4 10.1 85 274-359 105-194 (696)
278 PF09269 DUF1967: Domain of un 20.1 84 0.0018 23.9 2.1 22 122-143 41-62 (69)
No 1
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-100 Score=807.74 Aligned_cols=545 Identities=50% Similarity=0.869 Sum_probs=501.4
Q ss_pred CccccCCCCC-CcccccCCCCCCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCC
Q 005991 56 WNVYRSARSP-LTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHG 134 (666)
Q Consensus 56 ~~~~r~~~~~-~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~g 134 (666)
..+||+...+ ..+.+. ...+..|+++.|.+.+..+|+.++|+.+...++ .++|+|+||.|..+++.++|++|+++|
T Consensus 53 ~~~~~s~~~~~~~~~~~--~~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~-~~~~~~~tY~q~~e~~~~~~~~l~~lG 129 (691)
T KOG1256|consen 53 DGSRRSAVLPREELFSC--PFDGPLTLYEGFRRSVEKSGNGPMLGTRVIVDG-KGPYEWLTYKQVYERAENLGSGLRKLG 129 (691)
T ss_pred CCceeeeeccCCCCCCC--CCCCcccHHHHhhcchhccCCCCceeEEecccC-CCCcEEEEHHHHHHHHHHHHHHHHHhC
Confidence 4677777654 233222 246889999999999999999999999965443 478999999999999999999999999
Q ss_pred CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEc-cccHHHHHHhhhc--CCCceE
Q 005991 135 LQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCI-PQTLNTLLSFISE--IPSVHL 211 (666)
Q Consensus 135 v~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~-~~~~~~~~~~~~~--~~~l~~ 211 (666)
+++++.|||++-|++||+++.+||..+|+++|||+++++++++.+|++++++.++|++ ++.+..+.+.... +|.++.
T Consensus 130 ~~~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~ 209 (691)
T KOG1256|consen 130 VKEDSKVGIYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKA 209 (691)
T ss_pred CCCCceEEEeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCcccee
Confidence 9999999999999999999999999999999999999999999999999999999999 6677888877763 889999
Q ss_pred EEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCCCCCCCC-CCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccc
Q 005991 212 IVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPF-CPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL 290 (666)
Q Consensus 212 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~ 290 (666)
+|.+++.....+......++.+++|+++++.|....... .++.|+|+|.|+|||||||+|||||+||+|+++.+.....
T Consensus 210 iI~~~~~~~~~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~ 289 (691)
T KOG1256|consen 210 IIQLDEPSDELKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFF 289 (691)
T ss_pred EEEecCCchhhhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhh
Confidence 999999988888888889999999999999997766655 4889999999999999999999999999999986653221
Q ss_pred c------cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEecCCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHH
Q 005991 291 M------VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNA 364 (666)
Q Consensus 291 ~------~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 364 (666)
. ......|+++++|||+|++++......++.|++++|+++|+..+.+++++.+||.+.+||++|+++++.+++.
T Consensus 290 ~~~~~~~~~~~~~dv~lSyLPLAHi~er~~~~~~~~~G~~IgF~~gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~ 369 (691)
T KOG1256|consen 290 LSAAENAKATVGDDVYLSYLPLAHIFERVVELYTFYIGAKIGFARGDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQ 369 (691)
T ss_pred hhhcccccccccCceEEEeCcHHHHHHHHHHHhHhhcccEEEEecCChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHH
Confidence 1 1223479999999999999999988888999999999999999999999999999999999999999999999
Q ss_pred HhhcchHHHHHHHHHHHHHH-HHHHcCCCC--ChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCcccc
Q 005991 365 VKASGTLREKLFTAAYNSKK-QAIVSGQTP--SKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVME 441 (666)
Q Consensus 365 ~~~~~~~~~~l~~~~~~~k~-~~~~~~~~~--~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~ 441 (666)
+.+++.+++++|+.|+..|. ..+..|... ..+||+++|+|+++.+|+++|.+++|++|+++++..+++..+||+|++
T Consensus 370 ~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~e 449 (691)
T KOG1256|consen 370 VQKSGFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLE 449 (691)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeee
Confidence 99999999999999999999 677787775 699999999999999999999999999999999999999999999999
Q ss_pred CcccchhhhhhhccCCCCCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCC
Q 005991 442 GYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGD 521 (666)
Q Consensus 442 ~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~ 521 (666)
+||+|||++.++...+.+...+++|.|+|+++++++|++++++.+.+. .|||||||++||.|||+||+.|+++||.|
T Consensus 450 GYGlTEts~g~~~~~~~d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~---~GEIcirG~~Vf~GYyK~p~~T~e~ideD 526 (691)
T KOG1256|consen 450 GYGLTETSAGTTLTLPGDNVLGSVGPPVPGNEVKLVDVPEMNYDADGS---KGEICVRGPNVFMGYYKDPEKTAEAIDED 526 (691)
T ss_pred cccccccCCceEeccCCCCCCCCcCCcccCceEEEechHHhCcCcCCC---cceEEEecchhceeccCChHHHhhhhccc
Confidence 999999997777777777799999999999999999999999999987 89999999999999999999999999999
Q ss_pred CeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCCCeEEEEEEcChhHHHHHHH
Q 005991 522 GWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAA 601 (666)
Q Consensus 522 gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~~ 601 (666)
||+||||+|+|+++|.|+|+||+||+||+++||+|.|+.||+++.+.+.|.+++|+|++.+.+++|+|+|+.+.++.|+.
T Consensus 527 GWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~~~LvaiVvpd~e~~~~~a~ 606 (691)
T KOG1256|consen 527 GWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLRSFLVAIVVPDPEVLKSWAA 606 (691)
T ss_pred cccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcchhcEEEEEecChhhchhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HcCCC
Q 005991 602 SQGIK 606 (666)
Q Consensus 602 ~~~l~ 606 (666)
++++.
T Consensus 607 ~~~~~ 611 (691)
T KOG1256|consen 607 KDGVK 611 (691)
T ss_pred HccCc
Confidence 77665
No 2
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=5.6e-97 Score=743.39 Aligned_cols=594 Identities=38% Similarity=0.609 Sum_probs=528.7
Q ss_pred CceEEcCCCCCCCcCccccCCCCCCcccccCCCCCCCCCHHHHHHHHHHhCCCCceEEEEEe--------ccCc------
Q 005991 42 GYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVR--------VDGT------ 107 (666)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~--------~~~~------ 107 (666)
++.|++.....+.++.+|||....++|.+. +.+...|++++|++.++++.++.++++|+. .||+
T Consensus 6 ~~~V~~~~~~n~~e~~p~Rnv~~~~~L~~~--~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~ 83 (678)
T KOG1180|consen 6 KYRVKAKPAANEHETAPYRNVRSFDGLVSP--PNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYE 83 (678)
T ss_pred hcccccCCCCCCCCCccccccccCCCccCC--CCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEe
Confidence 456666666566778899999876667754 567899999999999999999999999865 2443
Q ss_pred cCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCE-EEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCc
Q 005991 108 VGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVR-IGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEI 186 (666)
Q Consensus 108 ~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~-V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~ 186 (666)
.++|.|+||.|+.+++.++|++|.+.|++++++ ++|+++.+.+|+++++||++.+..+|.++.+++.+.+.|-|+++++
T Consensus 84 Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~ 163 (678)
T KOG1180|consen 84 LGDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETES 163 (678)
T ss_pred ccceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccc
Confidence 678999999999999999999999999998776 9999999999999999999999999999999999999999999999
Q ss_pred eEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCC----CCCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEE
Q 005991 187 EAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPS----LPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATIC 262 (666)
Q Consensus 187 ~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~ 262 (666)
+.+||+.+.++++...+..++.+++||.++..+..... .....++.+++|+++++.|.....++.++.|+|+|+||
T Consensus 164 ~~i~T~~~LL~kl~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IM 243 (678)
T KOG1180|consen 164 TAIFTDSELLPKLKAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIM 243 (678)
T ss_pred eEEEeCHHHHHHHHHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEE
Confidence 99999999999999988999999999999964422221 12346789999999999999877677777999999999
Q ss_pred eccCCCCCccEEEecHHHHHHHHhhccccc-ccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEecCCHHHHH-----
Q 005991 263 YTSGTTGTPKGAVLTHGNLISNVAGFSLMV-QFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQGDNLKLM----- 336 (666)
Q Consensus 263 ~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~----- 336 (666)
|||||||.||||+++|+|+++.+.+..... .+++.|+++.++||+|++++.+.+.+++.|+++++-+ +..+.
T Consensus 244 YTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S--~~TLtdts~k 321 (678)
T KOG1180|consen 244 YTSGSTGLPKGVMLTHSNIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSS--PLTLTDTSSK 321 (678)
T ss_pred EcCCCCCCCceEEEecccHHhhhhhhcccCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCC--cceecccchh
Confidence 999999999999999999999998877664 6889999999999999999999999999999999854 22222
Q ss_pred ------HHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhC
Q 005991 337 ------DDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLG 410 (666)
Q Consensus 337 ------~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~ 410 (666)
-++..+|||++.+||.+|+++.+++...+...+.+.+.+|..++..|...+......+.++|.++|+++|..+|
T Consensus 322 i~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lG 401 (678)
T KOG1180|consen 322 IKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLG 401 (678)
T ss_pred hccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhC
Confidence 26788999999999999999999999999999999999999999999999988888889999999999999999
Q ss_pred CceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCccCcEEEEEecCCCCCCCCCCC
Q 005991 411 GRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQP 490 (666)
Q Consensus 411 ~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~ 490 (666)
+++|++++||+|++++.++|+..+++|++.++||+||+++..+...+.+...+.+|.|+++++++++|.++++|...+.|
T Consensus 402 G~lR~~LsGGapLS~dtQrF~nic~C~Pv~qGYGLTEtca~~tv~e~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~P 481 (678)
T KOG1180|consen 402 GNLRYILSGGAPLSPDTQRFMNICFCCPVLQGYGLTETCAAATVLEPEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKP 481 (678)
T ss_pred CceEEEEeCCCCCCHHHHHHHHHhccccccccccccchhcccEecChhhcccccccCCccceEEEEEEhhhcCccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCccEEEEeCCCcCccccCChhhhhhccCC-CC--eeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhc
Q 005991 491 HPRGEICVRGPIVFQGYYKNEVQTREVIDG-DG--WLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAK 567 (666)
Q Consensus 491 ~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~-~g--w~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~ 567 (666)
|+|||||+|+++..|||+||+.|++.|+. || ||+|||+|++.+||+|.|+||+||++|+.+||+|+++.||++|+.
T Consensus 482 -PrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s 560 (678)
T KOG1180|consen 482 -PRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRS 560 (678)
T ss_pred -CCceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhc
Confidence 89999999999999999999999999977 88 999999999999999999999999999999999999999999999
Q ss_pred CcCcceEEEEEeCCCCeEEEEEEcChhHHHHHHHHcCCCc--------------------------ccccccccCcchhH
Q 005991 568 CKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQGIKV--------------------------IYCFSFRANSHVIF 621 (666)
Q Consensus 568 ~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~~~~~l~~--------------------------~~~~~~~~p~~i~~ 621 (666)
.|.|...+|++++...++||+|||+...+..++.+.|+.. .-+..+.+|..|++
T Consensus 561 ~p~V~NICvyAd~~~s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l 640 (678)
T KOG1180|consen 561 SPYVDNICVYADSNKSKPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVL 640 (678)
T ss_pred CcchhheEEecccccceeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEe
Confidence 9999999999999999999999998644444444444331 01137788888888
Q ss_pred HHHHH-------HHhhhhhhhhhccc
Q 005991 622 IALIH-------NLCQLYSSKELFRS 640 (666)
Q Consensus 622 v~~~~-------~~~gK~~r~~l~~~ 640 (666)
.++|= +..-|+.|+.++..
T Consensus 641 ~~e~WTPenGlvT~A~KLKRk~I~~~ 666 (678)
T KOG1180|consen 641 SPEPWTPENGLVTAALKLKRKEILAA 666 (678)
T ss_pred cCCCcCCCccccHHHHHhhHHHHHHH
Confidence 87543 33356666665543
No 3
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.1e-90 Score=787.95 Aligned_cols=603 Identities=77% Similarity=1.277 Sum_probs=526.2
Q ss_pred ccCCCceEEcCCCCCCCcCccccCCCCCCcccccCCCCCCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHH
Q 005991 38 VQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYG 117 (666)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~ 117 (666)
.+...||++++++.+...+.+||+...+.++.+.++..+...|++++|+++++++||++|++++...++..+.++++||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~ 82 (651)
T PLN02736 3 VHEQGYSVVLPEKLQTGKWNVYRSARSPLKLVSRFPDHPEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYG 82 (651)
T ss_pred ccccCcceeCCCCCCCCCCCeecCccccccccccCCCCCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHH
Confidence 34567999999999999999999998888888777777888999999999999999999997652223333457889999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHH
Q 005991 118 EVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLN 197 (666)
Q Consensus 118 el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 197 (666)
||+++++++|++|.++|+++||+|+|+++|++||+++++||+++|+++||+++.++++++.+++++++++++|++.+..+
T Consensus 83 el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~ 162 (651)
T PLN02736 83 EAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLN 162 (651)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred HHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEec
Q 005991 198 TLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLT 277 (666)
Q Consensus 198 ~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~t 277 (666)
.+......++.++.++.++.............+....+|+++...+.....+.....++|+++|+|||||||.||||++|
T Consensus 163 ~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~ls 242 (651)
T PLN02736 163 TLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLT 242 (651)
T ss_pred HHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEe
Confidence 77777777788888887754322111111123456678888876554332233345789999999999999999999999
Q ss_pred HHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEecCCHHHHHHHHHhhcCeEEeechHHHHHH
Q 005991 278 HGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (666)
Q Consensus 278 h~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 357 (666)
|+++++.+.+....+++.++|++++++|++|++++...+.+++.|++++++++++..+++.|++++||+++++|++|..+
T Consensus 243 h~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l 322 (651)
T PLN02736 243 HGNLIANVAGSSLSTKFYPSDVHISYLPLAHIYERVNQIVMLHYGVAVGFYQGDNLKLMDDLAALRPTIFCSVPRLYNRI 322 (651)
T ss_pred cHHHHHHHHHHHhccCCCCCCEEEEeCCHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHHHHHhCCcEEecchHHHHHH
Confidence 99999988888777888999999999999999999888889999999999989999999999999999999999999999
Q ss_pred HHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCC
Q 005991 358 YAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGC 437 (666)
Q Consensus 358 ~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~ 437 (666)
++.+...+...+.+++.++..++..+...+..+..+...++++++++++..+|+++|.+++||+++++++.++++..+|+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~ 402 (651)
T PLN02736 323 YDGITNAVKESGGLKERLFNAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGG 402 (651)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCC
Confidence 99998889999999999999999988877777777777889999999999999999999999999999999999988999
Q ss_pred ccccCcccchhhhhhhccCCCCCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhc
Q 005991 438 QVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREV 517 (666)
Q Consensus 438 ~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~ 517 (666)
+++++||+||+++.++.....+...+++|+|+|+++++|+|.+++.+...+.+++.|||+|+||++|.|||++|+.|++.
T Consensus 403 ~~~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~ 482 (651)
T PLN02736 403 RVLEGYGMTETSCVISGMDEGDNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREV 482 (651)
T ss_pred CeEEEechHHhchheeccCCCCCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhh
Confidence 99999999999877766665566778999999999999999766665556666678999999999999999999999999
Q ss_pred cCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCCCeEEEEEEcChhHHH
Q 005991 518 IDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLK 597 (666)
Q Consensus 518 ~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~ 597 (666)
|+.||||+|||+|++|+||+|+|+||+||+||+++|++|+|.|||++|.+||.|.+|+|+|+...+.++|+|+++++.+.
T Consensus 483 ~~~dgw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~~~A~vv~~~~~~~ 562 (651)
T PLN02736 483 IDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGDSLNSSLVAVVVVDPEVLK 562 (651)
T ss_pred hccCCCeeccceEEEcCCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEecCCCceeEEEEEeCHHHHH
Confidence 98899999999999999999999999999999878999999999999999999999999997767899999999988777
Q ss_pred HHHHHcCCCc--------------------------ccccccccCcchhHHHHH-------HHHhhhhhhhhhccc
Q 005991 598 DWAASQGIKV--------------------------IYCFSFRANSHVIFIALI-------HNLCQLYSSKELFRS 640 (666)
Q Consensus 598 ~~~~~~~l~~--------------------------~~~~~~~~p~~i~~v~~~-------~~~~gK~~r~~l~~~ 640 (666)
+|++..++.. .-...|++|++|.+++.+ .|.+||++|+++++.
T Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~ 638 (651)
T PLN02736 563 AWAASEGIKYEDLKQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAY 638 (651)
T ss_pred HHHHHcCCCccCHHHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHH
Confidence 7665444320 013488999999999755 367799999999886
No 4
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=3.9e-87 Score=760.63 Aligned_cols=595 Identities=35% Similarity=0.606 Sum_probs=498.9
Q ss_pred CCceEEcCCCCCCCcCccccCCCCCCcccccCCCCCCCCCHHHHHHHHHHhCCCCceEEEEEec--------cC------
Q 005991 41 QGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRV--------DG------ 106 (666)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~--------~~------ 106 (666)
.+++++++.+..++. +|||+... .+... +.+...|+.++|+++++++||++|++++... ++
T Consensus 25 ~~~~~~~~~~~~~~~--~~r~~~~~-~~~~~--~~~~~~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~ 99 (696)
T PLN02387 25 KKRGVPVDVGGEPGY--AIRNARFP-ELVET--PWEGATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKL 99 (696)
T ss_pred ccceecCCCCCCCCC--ceecCccc-ccccc--CCCCCCCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccc
Confidence 457787875544443 59999854 44433 2467889999999999999999999876321 22
Q ss_pred ccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCc
Q 005991 107 TVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEI 186 (666)
Q Consensus 107 ~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~ 186 (666)
..++|+++||+||.++++++|++|.++|+++||+|+|+++|++||+++++||+++|+++|||+++++++++.++|+++++
T Consensus 100 ~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~ 179 (696)
T PLN02387 100 HLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEV 179 (696)
T ss_pred cCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCC
Confidence 13568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCC-CCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEecc
Q 005991 187 EAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSL-PSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTS 265 (666)
Q Consensus 187 ~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TS 265 (666)
+++|++.+....+.+....++.++.++.+++........ ....++.+.+|+++...+...+.+.....++|+++|+|||
T Consensus 180 ~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTS 259 (696)
T PLN02387 180 TTVICDSKQLKKLIDISSQLETVKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTS 259 (696)
T ss_pred CEEEECHHHHHHHHHHhhccCCceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecC
Confidence 999999888888877777788899999887643211100 1223456778998887665433333445789999999999
Q ss_pred CCCCCccEEEecHHHHHHHHhhcccc-cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEecC----C-----HHHH
Q 005991 266 GTTGTPKGAVLTHGNLISNVAGFSLM-VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQG----D-----NLKL 335 (666)
Q Consensus 266 GTTG~PKgV~~th~~l~~~~~~~~~~-~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~----~-----~~~~ 335 (666)
||||.||||++||+|+++.+...... .++.++|++++++|++|++++...+.++..|+++.+... + +..+
T Consensus 260 GTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~ 339 (696)
T PLN02387 260 GSTGLPKGVMMTHGNIVATVAGVMTVVPKLGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGT 339 (696)
T ss_pred CCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCc
Confidence 99999999999999999888766544 357889999999999999999887777888888876431 1 2345
Q ss_pred HHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcC-----CCCChhhhHHhhHHHHHHhC
Q 005991 336 MDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSG-----QTPSKMWDRLVFNKIRERLG 410 (666)
Q Consensus 336 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~-----~~~~~~~d~~~~~~~~~~~~ 410 (666)
++++++++||+++++|++|.++.+.+...+...+.+++.+|..++..+...+... ...+.++|.++|+++++.+|
T Consensus 340 ~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 419 (696)
T PLN02387 340 KGDASALKPTLMTAVPAILDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLG 419 (696)
T ss_pred hhhHHHhCCcEEEehhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhC
Confidence 6789999999999999999999999888888888999999999998877665321 23457899999999999999
Q ss_pred CceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCccCcEEEEEecCCCCCCCCCCC
Q 005991 411 GRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQP 490 (666)
Q Consensus 411 ~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~ 490 (666)
+++|.+++||+++++++.++++..+|++++++||+||+++.++.....+...+++|+|+|+++++|+|.+++++...+.+
T Consensus 420 ~~lr~i~~GGapl~~~~~~~~~~~~g~~v~~~YG~TEt~~~~~~~~~~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~ 499 (696)
T PLN02387 420 GRIRFMLSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGATFSEWDDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKP 499 (696)
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHcCCCeeEeechhhcccceeecCcccCCCCccCCCCCceEEEEeeccccCcccCCCC
Confidence 99999999999999999999988889999999999999877776666666778999999999999999777777766666
Q ss_pred CCccEEEEeCCCcCccccCChhhhhhcc--CCCC--eeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHh
Q 005991 491 HPRGEICVRGPIVFQGYYKNEVQTREVI--DGDG--WLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYA 566 (666)
Q Consensus 491 ~~~GEl~v~g~~v~~GY~~~~~~t~~~~--~~~g--w~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~ 566 (666)
++.|||+|+||++|.|||++|+.|+++| +.+| ||+|||+|++|+||+|+|+||+||+||+++|++|+|++||++|.
T Consensus 500 ~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~ 579 (696)
T PLN02387 500 MPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALS 579 (696)
T ss_pred CCCceEEeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHh
Confidence 6789999999999999999999999998 4445 99999999999999999999999999987899999999999999
Q ss_pred cCcCcceEEEEEeCCCCeEEEEEEcChhHHHHHHHHcCCC--------------------------cccccccccCcchh
Q 005991 567 KCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQGIK--------------------------VIYCFSFRANSHVI 620 (666)
Q Consensus 567 ~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~~~~~l~--------------------------~~~~~~~~~p~~i~ 620 (666)
+||.|.+|+|+|++.+.+++|+|+|+++.++.|++++++. ...+..|++|++|.
T Consensus 580 ~~p~V~~~~V~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~ 659 (696)
T PLN02387 580 VSPYVDNIMVHADPFHSYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIK 659 (696)
T ss_pred cCCCeeEEEEEecCCcceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEE
Confidence 9999999999999988999999999999988888766553 11245788888888
Q ss_pred HHHHH-------HHHhhhhhhhhhccc
Q 005991 621 FIALI-------HNLCQLYSSKELFRS 640 (666)
Q Consensus 621 ~v~~~-------~~~~gK~~r~~l~~~ 640 (666)
+++.| .|.+.|+.|+.+++.
T Consensus 660 l~~~~~t~~~g~lT~t~K~~R~~i~~~ 686 (696)
T PLN02387 660 LLPEPWTPESGLVTAALKLKREQIRKK 686 (696)
T ss_pred EECCCCCCCCCcCChhhhhhhHHHHHH
Confidence 87644 344468888888776
No 5
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3e-86 Score=747.44 Aligned_cols=549 Identities=24% Similarity=0.398 Sum_probs=468.2
Q ss_pred CCceEEcCCCCCCCcCccccCCCCCCcccccCCCCCCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHH
Q 005991 41 QGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVS 120 (666)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~ 120 (666)
..|+..++.+....++.+||....... .+.....|+.++|.+.++++||++|+.+. +. ...++++||+||.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~l~~~~~~~p~~~Al~~~---~~-g~~~~~~Ty~el~ 98 (746)
T PTZ00342 28 KGYSEICEKATNENESSVYCMKDHKKK-----SSLYVYKHIMKLLLEKYKLNNNKIAIVEH---SC-GEPQNYITYGNFF 98 (746)
T ss_pred ceeeeEecCCCCCCCCCceecCchhhc-----ccccccchHHHHHHHHHhhcCCceeEecc---CC-CCCceeeeHHHHH
Confidence 468999999999899999998765544 12356789999999999999999999753 11 1236789999999
Q ss_pred HHHHHHHHHHHhC---CCCCC-----------CEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCc
Q 005991 121 AARKEIGSGLLFH---GLQKG-----------VRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEI 186 (666)
Q Consensus 121 ~~~~~lA~~L~~~---gv~~g-----------d~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~ 186 (666)
+++.++|++|.++ |+++| |+|+|+++|++||+++++||+++|++.||++++++++++.++|+++++
T Consensus 99 ~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~ 178 (746)
T PTZ00342 99 KKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKL 178 (746)
T ss_pred HHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCC
Confidence 9999999999974 99999 999999999999999999999999999999999999999999999999
Q ss_pred eEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCC-----------------CC-------------------------
Q 005991 187 EAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHL-----------------PS------------------------- 224 (666)
Q Consensus 187 ~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~-----------------~~------------------------- 224 (666)
+++|++.+..+.+.+....+|.++.+++++...... ..
T Consensus 179 ~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (746)
T PTZ00342 179 EWLCLDLDLVEGLLERKNELPHLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPL 258 (746)
T ss_pred CEEEEcHHHHHHHHHhhccCCCceEEEEECCCCccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999888888887777888999999987532110 00
Q ss_pred ---------------CCCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcc
Q 005991 225 ---------------LPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFS 289 (666)
Q Consensus 225 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~ 289 (666)
.....+....+|+++...... ..+..+.+++|+++|+|||||||.||||++||+|+++.+....
T Consensus 259 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~ 337 (746)
T PTZ00342 259 EYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTT-NYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLC 337 (746)
T ss_pred ccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhccc-CCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHh
Confidence 000112334555665443221 1223345789999999999999999999999999998876544
Q ss_pred ccc--ccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEecCCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhh
Q 005991 290 LMV--QFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKA 367 (666)
Q Consensus 290 ~~~--~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 367 (666)
... .....|++++++|++|++++...+.+++.|+++++++.++..++++|++++||++++||++|++|++.+...+..
T Consensus 338 ~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i~~~~~~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~ 417 (746)
T PTZ00342 338 KHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGTINIWSKDINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINN 417 (746)
T ss_pred hcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhh
Confidence 321 223568999999999999998888889999999998889999999999999999999999999999999988888
Q ss_pred cchHHHHHHHHHHHHHHHHHHcCCCCChhhhHH--hhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCccc
Q 005991 368 SGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRL--VFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGM 445 (666)
Q Consensus 368 ~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~ 445 (666)
.+.+++.+|..++..+..... + ..+.+++.+ +|+++++.+|+++|.+++||+++++++.++|+..+|++++++||+
T Consensus 418 ~~~~~~~~~~~a~~~~~~~~~-~-~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGl 495 (746)
T PTZ00342 418 LPPLKRFLVKKILSLRKSNNN-G-GFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGL 495 (746)
T ss_pred cCHHHHHHHHHHHHHHHHhhc-C-CcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeecc
Confidence 889999999999988877532 2 244566665 799999999999999999999999999999998899999999999
Q ss_pred chhhhhhhccCCCCCCCCCccCCc-cCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCee
Q 005991 446 TETSCIISAIDKGDNLSGHVGSPN-PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWL 524 (666)
Q Consensus 446 TE~~~~~~~~~~~~~~~~~vG~p~-~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~ 524 (666)
||+++.++...+.+...+++|+|+ |+++++|+|.++..... +++.|||+++||++|.|||++|+.|+++|+.||||
T Consensus 496 TEt~~~~~~~~~~~~~~gsvG~p~~pg~e~ki~d~~~~~~~~---~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~ 572 (746)
T PTZ00342 496 TETTGPIFVQHADDNNTESIGGPISPNTKYKVRTWETYKATD---TLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYF 572 (746)
T ss_pred CcccceeeeccCCCCCcccccCcCCCcEEEEEecccccccCC---CCCceEEEEecCcccccccCChhhhhhhcCcCCcc
Confidence 999877776666667789999998 99999999865433222 22479999999999999999999999999889999
Q ss_pred ecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCCCeEEEEEEcChhHHHHHHHHcC
Q 005991 525 HTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQG 604 (666)
Q Consensus 525 ~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~~~~~ 604 (666)
||||+|++|+||+|+|+||+||+||+++|++|+|++||++|.+||.|.+|+|+|++...+++|+|+|+++.+.+|+++.+
T Consensus 573 ~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~~~~~~~Alvv~d~~~~~~~a~~~~ 652 (746)
T PTZ00342 573 KTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNNLYSQISFINFCVVYGDDSMDGPLAIISVDKYLLFKCLKDDN 652 (746)
T ss_pred cCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHHHHhcCCCccEEEEEccCCccccEEEEECCHHHHHHHHHhcC
Confidence 99999999999999999999999998899999999999999999999999999987677999999999999999998754
No 6
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=6.8e-86 Score=746.76 Aligned_cols=581 Identities=38% Similarity=0.666 Sum_probs=470.9
Q ss_pred CCcCccccCCCCCCcccccCCCCCCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHh
Q 005991 53 TGKWNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLF 132 (666)
Q Consensus 53 ~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~ 132 (666)
+.++++||++.....+.. +.+...|+.++|+++++++||++|++++...++..++++++||+||+++++++|++|++
T Consensus 22 ~~~~~~~~~~~~~~~~~~---~~~~~~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~ 98 (666)
T PLN02614 22 PSVGPVYRSIFAKDGFPN---PIEGMDSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRS 98 (666)
T ss_pred CCCCCcccCcccccccCC---CCCCCCcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHH
Confidence 556788998865544432 24567899999999999999999998652112222456789999999999999999999
Q ss_pred CCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhc-CCCceE
Q 005991 133 HGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISE-IPSVHL 211 (666)
Q Consensus 133 ~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~l~~ 211 (666)
+|+++||+|+|+++|++||++++|||+++|+++||+++.++++++.+++++++++++|++.+....+...... .+.++.
T Consensus 99 ~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~ 178 (666)
T PLN02614 99 VGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKT 178 (666)
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceE
Confidence 9999999999999999999999999999999999999999999999999999999999987765544333222 233677
Q ss_pred EEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc
Q 005991 212 IVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM 291 (666)
Q Consensus 212 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~ 291 (666)
++.++.............+..+.+|+++...+.....+.....++|+++|+|||||||.||||++||+|+++.+.+....
T Consensus 179 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~ 258 (666)
T PLN02614 179 VVSFGGVSREQKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRL 258 (666)
T ss_pred EEEeCCCChHHhhhhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhh
Confidence 77775421110000111234567888877654322222233568999999999999999999999999999877654433
Q ss_pred c-----ccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEecCCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHh
Q 005991 292 V-----QFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVK 366 (666)
Q Consensus 292 ~-----~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 366 (666)
+ ++.++|++++++|++|++++...+.+++.|+++++.++++..++++|++++||+++++|++|+.++..+...+.
T Consensus 259 ~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~ 338 (666)
T PLN02614 259 LKSANAALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRGDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLS 338 (666)
T ss_pred ccccccCCCCCcEEEEeccHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHh
Confidence 2 56789999999999999998776677889999999888999999999999999999999999999998888888
Q ss_pred hcchHHHHHHHHHHHHHHHHHHcCCC---CChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCc
Q 005991 367 ASGTLREKLFTAAYNSKKQAIVSGQT---PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGY 443 (666)
Q Consensus 367 ~~~~~~~~l~~~~~~~k~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~Y 443 (666)
..+.+++.++..++..+......+.. ...+++.++++++++.+++++|.+++||+++++++.++++...+++++++|
T Consensus 339 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~~~~~~~~~~~~i~~~Y 418 (666)
T PLN02614 339 DGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGY 418 (666)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHhcCCCEEeeC
Confidence 88888899999888877666554432 236778889999999999999999999999999875555443358999999
Q ss_pred ccchhhhhhhccCCCC-CCCCCccCCccCcEEEEEecCCC--CCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCC
Q 005991 444 GMTETSCIISAIDKGD-NLSGHVGSPNPACEIKLVDVPEM--NYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDG 520 (666)
Q Consensus 444 G~TE~~~~~~~~~~~~-~~~~~vG~p~~~~~v~ivd~~~~--~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~ 520 (666)
|+||+++.++...+.+ ...+++|+|+||++++|+|++++ ..++. ++.|||||+||++|.|||++|+.|+++| .
T Consensus 419 G~TE~~~~~~~~~~~~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~---g~~GEl~vrGp~v~~GY~~~pe~T~~~f-~ 494 (666)
T PLN02614 419 GLTESCAGTFVSLPDELDMLGTVGPPVPNVDIRLESVPEMEYDALAS---TPRGEICIRGKTLFSGYYKREDLTKEVL-I 494 (666)
T ss_pred chHhhhhheeeeccccCCcCCcccCcCCceEEEEeeecccCcccCCC---CCCceEEEcCCcccccccCCHHHhhhhh-c
Confidence 9999986555444333 35689999999999999986554 33333 3589999999999999999999999999 6
Q ss_pred CCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCCCeEEEEEEcChhHHHHHH
Q 005991 521 DGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWA 600 (666)
Q Consensus 521 ~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~ 600 (666)
||||||||+|++|+||+|+|+||+||+||+++|+||+|.|||++|.+||+|.+|+|+|++.+.+++|+|+|+.+.+.+|+
T Consensus 495 dGw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~~~l~alvv~~~~~~~~~~ 574 (666)
T PLN02614 495 DGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFESFLVAIANPNQQILERWA 574 (666)
T ss_pred cCCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCcceEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999878999999999999999999999999999878899999999998888887
Q ss_pred HHcCCCc-------------------------ccccccccCcchhHHHHH-------HHHhhhhhhhhhccc
Q 005991 601 ASQGIKV-------------------------IYCFSFRANSHVIFIALI-------HNLCQLYSSKELFRS 640 (666)
Q Consensus 601 ~~~~l~~-------------------------~~~~~~~~p~~i~~v~~~-------~~~~gK~~r~~l~~~ 640 (666)
+++++.. .-+..|..++.|.++..+ .|.++|+.|+.+.+.
T Consensus 575 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~ 646 (666)
T PLN02614 575 AENGVSGDYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKY 646 (666)
T ss_pred HhcCCCcCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHH
Confidence 7665430 113466677777766533 566689999888777
No 7
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=2e-86 Score=712.42 Aligned_cols=505 Identities=39% Similarity=0.651 Sum_probs=431.1
Q ss_pred CCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH
Q 005991 76 PEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD 155 (666)
Q Consensus 76 ~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~ 155 (666)
....++..++.+.++.+|+.+++.+. ..+.++.+||+|+.+++.++|++|++.|+.+||+|+|++.|+++|+++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~a~~~~-----~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d 87 (613)
T COG1022 13 AEIHTLPKRLAERVKDRPDGVALMYK-----ELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIAD 87 (613)
T ss_pred hhcccHHHHHHHHhhcCCcceeEeee-----cCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHH
Confidence 35578899999999999998888765 2466889999999999999999999999977999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccH-HHHHHhhhcCCCceEEEEeCCCCCC-----CCCCCCCC
Q 005991 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTL-NTLLSFISEIPSVHLIVVVGGKDEH-----LPSLPSTS 229 (666)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-~~~~~~~~~~~~l~~ii~~~~~~~~-----~~~~~~~~ 229 (666)
+||+.+|++.||++++++++++.|+|++++++++|++.... +.+......++.+..++...+.... ........
T Consensus 88 ~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (613)
T COG1022 88 LAILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFP 167 (613)
T ss_pred HHHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccc
Confidence 99999999999999999999999999999999999998544 4444444443332222211110000 00000001
Q ss_pred CcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccc-cCCCcEEEEcCChHH
Q 005991 230 GVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQ-FYPSDIYMSYLPLAH 308 (666)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~-~~~~d~~l~~~pl~h 308 (666)
......+ .+...+ ......+..+||+|+|+|||||||.|||||+||+|+++++........ ++++|+++++||++|
T Consensus 168 ~~~~~~~-~~~~~~--~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaH 244 (613)
T COG1022 168 DEGISLF-LIDSAG--LEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAH 244 (613)
T ss_pred cccchhh-hhcccc--cccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHH
Confidence 1111111 111111 111224678999999999999999999999999999999999998886 999999999999999
Q ss_pred HHHHHHHHHHHHhCcEEEEecCCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Q 005991 309 IYERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIV 388 (666)
Q Consensus 309 ~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~ 388 (666)
++++.+.......|+...++..++..+++++++++||++++||++|+.+.+.+.+.+.+.+..++.+|..++..+.....
T Consensus 245 i~Er~~~~~~~~~~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~ 324 (613)
T COG1022 245 IFERAFEGGLALYGGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKIS 324 (613)
T ss_pred HHHHHHHHHHHhhcceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence 99999855545555555566789999999999999999999999999999999999999999999999999987754432
Q ss_pred c----CCCC--ChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCC
Q 005991 389 S----GQTP--SKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLS 462 (666)
Q Consensus 389 ~----~~~~--~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~ 462 (666)
. +... ....|+++|+|+++.+|+++|++++||+++++++..+++. .|+++.++||+|||++.++++++.....
T Consensus 325 ~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~-lGi~i~eGYGlTEts~~~~v~~~~~~~~ 403 (613)
T COG1022 325 RALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRS-LGIPILEGYGLTETSAVVSVNPPDRFVL 403 (613)
T ss_pred hhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHH-cCCCeEEEecccccccceEEccccCccc
Confidence 2 2222 2457999999999999999999999999999999999998 5899999999999999999999999999
Q ss_pred CCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEc
Q 005991 463 GHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIID 542 (666)
Q Consensus 463 ~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~G 542 (666)
+++|.|+|++|++|+| .|||+||||+||+|||++|++|+++|++||||+|||+|.+|++|+|+|+|
T Consensus 404 gtvG~p~p~~evKI~d--------------~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~L~i~g 469 (613)
T COG1022 404 GTVGKPLPGIEVKIAD--------------DGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDEDGYLVITG 469 (613)
T ss_pred CCcCCcCCCceEEEcc--------------CceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcCCCcEEEee
Confidence 9999999999999998 69999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCCCeEEEEEEcChhHHHHHHHHcC
Q 005991 543 RKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQG 604 (666)
Q Consensus 543 R~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~~~~~ 604 (666)
|+||+||+++|+||+|+.||+.+.++|.|.+++|+| +++.+++|+|+|+.+.+.+|...++
T Consensus 470 RkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg-~~k~~~~AlIvp~~~~l~~~a~~~~ 530 (613)
T COG1022 470 RKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVG-DDKKFLVALIVPDFDALEKWAESLN 530 (613)
T ss_pred cccceEECCCCcccChHHHHHHHhcCCCeeEEEEEe-cCCcceEEEEeCCHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999 6689999999999999999998875
No 8
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=4.2e-85 Score=741.04 Aligned_cols=582 Identities=40% Similarity=0.673 Sum_probs=478.7
Q ss_pred CCCcCccccCCCCCCcccccCCCCCCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHH
Q 005991 52 QTGKWNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLL 131 (666)
Q Consensus 52 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~ 131 (666)
.+.++++||++...+.+.+. .++..|++++|.+.++++|+++|++.+...++..++++++||+||.++++++|++|.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~---~~~~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~ 95 (660)
T PLN02861 19 KPSAGPVYRSIYAKDGLLDL---PADIDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIR 95 (660)
T ss_pred CCCCCCcccccccccccccC---CCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHH
Confidence 35568899998877666542 357789999999999999999999875322333456788999999999999999999
Q ss_pred hCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCC-Cce
Q 005991 132 FHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIP-SVH 210 (666)
Q Consensus 132 ~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~l~ 210 (666)
++|+++||+|+|+++|++||+++++||+++|+++|||+++++.+++.++|++++++++|++......+.......+ .++
T Consensus 96 ~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~ 175 (660)
T PLN02861 96 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLK 175 (660)
T ss_pred HcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCE
Confidence 9999999999999999999999999999999999999999999999999999999999998877666655555443 577
Q ss_pred EEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccc
Q 005991 211 LIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL 290 (666)
Q Consensus 211 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~ 290 (666)
.++.+++............+....+|+++...+... ....+..++|+++|+|||||||.||||++||+++++.+.....
T Consensus 176 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~ 254 (660)
T PLN02861 176 TIVSFGDVSSEQKEEAEELGVSCFSWEEFSLMGSLD-CELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDH 254 (660)
T ss_pred EEEEECCCChhhhhhhhcCCcEEEEHHHHHHhCccc-CCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHh
Confidence 888776432111101111234557788877654321 1223456899999999999999999999999999988766544
Q ss_pred ccc-----cCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEecCCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHH
Q 005991 291 MVQ-----FYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAV 365 (666)
Q Consensus 291 ~~~-----~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 365 (666)
.++ +.++|++++++|++|++++...+.+++.|++++++++++..++++|++++||+++++|++|+.|++.+...+
T Consensus 255 ~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~ 334 (660)
T PLN02861 255 LLKVTDRVATEEDSYFSYLPLAHVYDQVIETYCISKGASIGFWQGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKI 334 (660)
T ss_pred ccccccccCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHH
Confidence 333 467899999999999999887777899999999988899999999999999999999999999999999999
Q ss_pred hhcchHHHHHHHHHHHHHHHHHHcCCCC---ChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhC-Ccccc
Q 005991 366 KASGTLREKLFTAAYNSKKQAIVSGQTP---SKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG-CQVME 441 (666)
Q Consensus 366 ~~~~~~~~~l~~~~~~~k~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~v~~ 441 (666)
...+.+++.+|+.++..+......+... .+.+++++++++++.+|+++|.+++||+++++++.++++ .++ ..+++
T Consensus 335 ~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~~~~-~~~~~~l~~ 413 (660)
T PLN02861 335 SSGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEEFLR-VTSCSVLSQ 413 (660)
T ss_pred hccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHH-HHcCCCeeE
Confidence 9999999999999999888777654322 356788899999999999999999999999999866554 455 47999
Q ss_pred CcccchhhhhhhccCCCC-CCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCC
Q 005991 442 GYGMTETSCIISAIDKGD-NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDG 520 (666)
Q Consensus 442 ~YG~TE~~~~~~~~~~~~-~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~ 520 (666)
+||+||+++.++.....+ ...+++|+|+|+++++|+|.++.++.. ..+++.|||+|+||++|.|||++|+.|+++| .
T Consensus 414 ~YG~TE~~~~~~~~~~~~~~~~gsvG~p~p~~ev~i~d~~~~g~~~-~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f-~ 491 (660)
T PLN02861 414 GYGLTESCGGCFTSIANVFSMVGTVGVPMTTIEARLESVPEMGYDA-LSDVPRGEICLRGNTLFSGYHKRQDLTEEVL-I 491 (660)
T ss_pred ecchhhhhhceeecccccCCCCCCccCccCceEEEEEEccccCccc-CCCCCceeEEEcCCcccccccCCHHHHHhhh-h
Confidence 999999987655443332 356899999999999999855443221 1233589999999999999999999999999 6
Q ss_pred CCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCCCeEEEEEEcChhHHHHHH
Q 005991 521 DGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWA 600 (666)
Q Consensus 521 ~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~ 600 (666)
||||||||+|++|+||+|+|+||+||+||+++|++|+|++||++|.+||.|.+|+|+|.+.++.++|+|+++.+++.+|+
T Consensus 492 dGw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~~~~~~~A~vv~~~~~l~~~~ 571 (660)
T PLN02861 492 DGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNSFESFLVAVVVPDRQALEDWA 571 (660)
T ss_pred ccCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecCCcceeEEEEEcCHHHHHHHH
Confidence 89999999999999999999999999999878999999999999999999999999999877899999999999999998
Q ss_pred HHcCCCcc-------------------------cccccccCcchhHHH--H-----HHHHhhhhhhhhhccc
Q 005991 601 ASQGIKVI-------------------------YCFSFRANSHVIFIA--L-----IHNLCQLYSSKELFRS 640 (666)
Q Consensus 601 ~~~~l~~~-------------------------~~~~~~~p~~i~~v~--~-----~~~~~gK~~r~~l~~~ 640 (666)
+++++... -...+..++.+.+.+ + ..|.++|+.|+.+.+.
T Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~ 643 (660)
T PLN02861 572 ANNNKTGDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKY 643 (660)
T ss_pred HHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHH
Confidence 88765200 123455566655543 2 4677789999888777
No 9
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.3e-84 Score=735.71 Aligned_cols=593 Identities=41% Similarity=0.649 Sum_probs=488.7
Q ss_pred ceEEcCCCCC-----CCcCccccCCCCCCcccccCCCCCCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHH
Q 005991 43 YSVRLPEKLQ-----TGKWNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYG 117 (666)
Q Consensus 43 ~~~~~~~~~~-----~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~ 117 (666)
|++++.+..+ +.++++||+....+.+.. ..++..|++++|.+.++++|+++|++++...++..++++++||+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~ 80 (660)
T PLN02430 4 FAAQVEEGVKGKDGKPSVGPVYRNLLSKKGFPP---IDSDITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYK 80 (660)
T ss_pred eeeeecccCCCCCCCCCCCCccccccccccccC---CCCCCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHH
Confidence 5555543332 337899999875554432 34678999999999999999999998763223334567889999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHH
Q 005991 118 EVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLN 197 (666)
Q Consensus 118 el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 197 (666)
|+.++++++|++|.+.|+++||+|+|+++|++||+++++||+++|+++||++++++++++.+++++++++++|++.....
T Consensus 81 el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~ 160 (660)
T PLN02430 81 EVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIK 160 (660)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875432
Q ss_pred -HHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEe
Q 005991 198 -TLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVL 276 (666)
Q Consensus 198 -~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~ 276 (666)
.+.......+.++.+|.++.............++..++|+++...+........+..|+|+++|+|||||||.||||++
T Consensus 161 ~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~l 240 (660)
T PLN02430 161 ELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVL 240 (660)
T ss_pred HHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEe
Confidence 2322233456678888876532211111112245567899988766543333334578999999999999999999999
Q ss_pred cHHHHHHHHhhcccc-----cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEecCCHHHHHHHHHhhcCeEEeech
Q 005991 277 THGNLISNVAGFSLM-----VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVP 351 (666)
Q Consensus 277 th~~l~~~~~~~~~~-----~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P 351 (666)
||+|+.+.+...... .+++++|++++++|++|.+++...+.++..|++++++..++..+++++++++||++.++|
T Consensus 241 th~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~i~~~~~~~~~l~~~l~~~~pt~~~~vP 320 (660)
T PLN02430 241 THEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDRMIEEYFFRKGASVGYYHGDLNALRDDLMELKPTLLAGVP 320 (660)
T ss_pred ecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCChhhHHHHHHHhCCcEEEecH
Confidence 999998877654321 246789999999999999999887778899999999888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCC---CChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHH
Q 005991 352 RLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT---PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVM 428 (666)
Q Consensus 352 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~ 428 (666)
++|+++++.+...+...+.+++.+|..++..|...+..+.. ++.++|.++|+++++.+|+++|.+++||+++++++.
T Consensus 321 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~ 400 (660)
T PLN02430 321 RVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIE 400 (660)
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHH
Confidence 99999999999888888899999999999999888765532 346789999999999999999999999999999998
Q ss_pred HHHHHHhCCccccCcccchhhhhhhccCCCC-CCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccc
Q 005991 429 DFLKVCFGCQVMEGYGMTETSCIISAIDKGD-NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGY 507 (666)
Q Consensus 429 ~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY 507 (666)
++++...++.++++||+||+++.++...+.+ ...+++|+|.++++++++|.+++++.+.+. ++.|||+|+|++++.||
T Consensus 401 ~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~-~~~GEi~vrg~~v~~GY 479 (660)
T PLN02430 401 EFLRVTSCAFVVQGYGLTETLGPTTLGFPDEMCMLGTVGAPAVYNELRLEEVPEMGYDPLGE-PPRGEICVRGKCLFSGY 479 (660)
T ss_pred HHHHHhcCCCeeeecchhhhhhceEeeccccCCCCCCccCCCCceEEEEEEcCCcCcccCCC-CCcceEEecCCCccccc
Confidence 8777654578999999999987766654443 356899999999999999876665544332 24799999999999999
Q ss_pred cCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCCCeEEE
Q 005991 508 YKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVA 587 (666)
Q Consensus 508 ~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va 587 (666)
|++|+.|+++| .||||||||+|++|+||+|+|+||+||+||+++|++|+|++||++|.+||.|.+|+|+|++.+++++|
T Consensus 480 ~~~~e~t~~~~-~dGw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~~~~~~~A 558 (660)
T PLN02430 480 YKNPELTEEVM-KDGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDSFKSMLVA 558 (660)
T ss_pred cCChHHhhhhh-hccceeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEecCCcceEEE
Confidence 99999999999 69999999999999999999999999999987899999999999999999999999999876789999
Q ss_pred EEEcChhHHHHHHHHcCCCc-------------------------ccccccccCcchhHHHHH-------HHHhhhhhhh
Q 005991 588 IVAVDPDVLKDWAASQGIKV-------------------------IYCFSFRANSHVIFIALI-------HNLCQLYSSK 635 (666)
Q Consensus 588 ~vv~~~~~l~~~~~~~~l~~-------------------------~~~~~~~~p~~i~~v~~~-------~~~~gK~~r~ 635 (666)
+|+++++.+.+|++++++.. ..+..|+.+++|.+.+.+ .|.++|+.|+
T Consensus 559 ~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~ 638 (660)
T PLN02430 559 VVVPNEENTNKWAKDNGFTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRN 638 (660)
T ss_pred EEEcCHHHHHHHHHhCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhH
Confidence 99999988888777654420 113467777777766533 5667899999
Q ss_pred hhccc
Q 005991 636 ELFRS 640 (666)
Q Consensus 636 ~l~~~ 640 (666)
.+.+.
T Consensus 639 ~i~~~ 643 (660)
T PLN02430 639 NLLKY 643 (660)
T ss_pred HHHHH
Confidence 88777
No 10
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.9e-82 Score=718.15 Aligned_cols=586 Identities=32% Similarity=0.520 Sum_probs=479.2
Q ss_pred CCceEEcCCCCCCCcCccccCCCCCC----cccccCCCCCCCCCHHHHHHHHHHhCCCCceEEEEEec----------cC
Q 005991 41 QGYSVRLPEKLQTGKWNVYRSARSPL----TLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRV----------DG 106 (666)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~----------~~ 106 (666)
..+++++++...+..+++||++.... .+... .++..|++++|.++++++||++|++++... ++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~ 106 (700)
T PTZ00216 30 GPQNVPVPGTETENASAIYRIAGVTDEEHERLRNE---WYYGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADG 106 (700)
T ss_pred CCcceecCCCCCCCCCCcccCcccccchhcccccc---cCCCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCC
Confidence 35788898888888899999876443 22222 245679999999999999999999986210 11
Q ss_pred c--------cCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHH
Q 005991 107 T--------VGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVK 178 (666)
Q Consensus 107 ~--------~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~ 178 (666)
. .++++++||+||.++++++|++|.++|+++||+|+|+++|++||+++++||+++|++++|+++.++++++.
T Consensus 107 ~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~ 186 (700)
T PTZ00216 107 KERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALA 186 (700)
T ss_pred ccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHH
Confidence 1 13578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCceEEEEccccHHHHHHhhhc--CCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCC--CCCC-CCCCC
Q 005991 179 YVVNHAEIEAIFCIPQTLNTLLSFISE--IPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGC--SSPQ-PFCPP 253 (666)
Q Consensus 179 ~~l~~~~~~~vi~~~~~~~~~~~~~~~--~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~ 253 (666)
+++++++++++|++......+.+.... .+.. .+++++..... ....+....+|+++...+. .... ...+.
T Consensus 187 ~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~-~ii~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (700)
T PTZ00216 187 YALRETECKAIVCNGKNVPNLLRLMKSGGMPNT-TIIYLDSLPAS----VDTEGCRLVAWTDVVAKGHSAGSHHPLNIPE 261 (700)
T ss_pred hhhhccCccEEEECHHHHHHHHHhhhhccCCce-EEEEECCCccc----cccCCceEEEHHHHHHhCCccccccccCCCC
Confidence 999999999999997766555444332 2333 45555542211 1223556789999887652 1111 12345
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccccc-----ccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEe
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMV-----QFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFY 328 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~ 328 (666)
.++|+++|+|||||||.||||++||+|+++.+.+....+ .+.++|++++++|++|++++......+..|+++++
T Consensus 262 ~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~- 340 (700)
T PTZ00216 262 NNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGF- 340 (700)
T ss_pred CcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEE-
Confidence 789999999999999999999999999998877654432 24678999999999999998776667888888776
Q ss_pred cCCHHHHHH-------HHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHh
Q 005991 329 QGDNLKLMD-------DLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLV 401 (666)
Q Consensus 329 ~~~~~~~~~-------~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~ 401 (666)
.++..+.+ ++++++||++.++|++|+.+++.+...+...+.+++.+|..++..+...+..+. ..++++.++
T Consensus 341 -~~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~v 418 (700)
T PTZ00216 341 -GSPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGK-DTPYWNEKV 418 (700)
T ss_pred -CCHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCC-CCchHHHHH
Confidence 45666665 789999999999999999999999888888889999999999998887766543 346789999
Q ss_pred hHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCccCcEEEEEecCC
Q 005991 402 FNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPE 481 (666)
Q Consensus 402 ~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~ivd~~~ 481 (666)
|++++..+|+++|.+++||+++++++.++++..++ +++++||+||+++.++.....+...+++|+|++|++++|+|.++
T Consensus 419 ~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~-~l~~~YG~TEt~~~~~~~~~~~~~~~svG~p~~g~evkI~d~~~ 497 (700)
T PTZ00216 419 FSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG-MVIQGWGLTETVCCGGIQRTGDLEPNAVGQLLKGVEMKLLDTEE 497 (700)
T ss_pred HHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh-hHhhccCcccccccccccCCCCCCCCCcCCcCCCeEEEEeechh
Confidence 99999999999999999999999999999988778 99999999999877666665566778999999999999999654
Q ss_pred CCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHH
Q 005991 482 MNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKI 561 (666)
Q Consensus 482 ~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eI 561 (666)
.. ..+.+++.|||||+|++++.|||++|+.|+++|+.||||||||+|++|+||+|+|+||+||+||+++|++|+|++|
T Consensus 498 ~~--~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eI 575 (700)
T PTZ00216 498 YK--HTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEAL 575 (700)
T ss_pred hc--cCCCCCCCceEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHH
Confidence 22 2233445899999999999999999999999998899999999999999999999999999999669999999999
Q ss_pred HHHHhcCcCcce--EEEEEeCCCCeEEEEEEcChhHHHHHHHHcCCCc-------------------------ccccccc
Q 005991 562 ENVYAKCKFVLQ--CFIYGDSFNSCLVAIVAVDPDVLKDWAASQGIKV-------------------------IYCFSFR 614 (666)
Q Consensus 562 E~~l~~~p~V~~--~~V~g~~~~~~~va~vv~~~~~l~~~~~~~~l~~-------------------------~~~~~~~ 614 (666)
|++|.+||.|.+ ++|++.+++++++|+|+++++.+.+|++++++.. .-...|.
T Consensus 576 E~~l~~~p~V~~~~~~v~~~~~~~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e 655 (700)
T PTZ00216 576 EALYGQNELVVPNGVCVLVHPARSYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFE 655 (700)
T ss_pred HHHHhcCcCcccceEEEEEecCCceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCce
Confidence 999999999997 5677777789999999999988888887765431 0122455
Q ss_pred cCcchhHHHH-------HHHHhhhhhhhhhccc
Q 005991 615 ANSHVIFIAL-------IHNLCQLYSSKELFRS 640 (666)
Q Consensus 615 ~p~~i~~v~~-------~~~~~gK~~r~~l~~~ 640 (666)
.+++|.++.. ..|.++|+.|+++.+.
T Consensus 656 ~i~~~~~~~~~f~~~~g~lT~t~K~~R~~i~~~ 688 (700)
T PTZ00216 656 IVRHVRVLSDEWTPENGVLTAAMKLKRRVIDER 688 (700)
T ss_pred eEeEEEEECCCCCCCCCCCChhhccchHHHHHH
Confidence 6666666532 2366688888888765
No 11
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-79 Score=608.52 Aligned_cols=495 Identities=22% Similarity=0.333 Sum_probs=428.2
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
...|+.++++..+++.||+.|+++.. +..++||+|+.+.++++|++|..+|+++||+|+++.||+.+|+...|
T Consensus 48 ~~~Tigq~l~~~t~~v~dkea~Vf~~-------eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~l 120 (596)
T KOG1177|consen 48 DSETIGQLLETTTERVPDKEAAVFDH-------EGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQL 120 (596)
T ss_pred ccccHHHHHHHHhhccCcceEEEEee-------ccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHH
Confidence 45799999999999999999998861 12359999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEcccc-----HHHHHHhhh-------------cCCCceEEEEeCCC
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT-----LNTLLSFIS-------------EIPSVHLIVVVGGK 218 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~-------------~~~~l~~ii~~~~~ 218 (666)
||.++|.+.|++||.+..+++++.|+..+++++|+...+ .+.+.++.+ .+|.+.++|..+++
T Consensus 121 A~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed 200 (596)
T KOG1177|consen 121 ACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADED 200 (596)
T ss_pred HHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCC
Confidence 999999999999999999999999999999999998643 334444443 25678888887743
Q ss_pred CCCCCCCCCCCCcEEEehHHHHhcCCCCCCC-----CCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccc
Q 005991 219 DEHLPSLPSTSGVKLISYLQLQSQGCSSPQP-----FCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQ 293 (666)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~ 293 (666)
.+. .....+++++..+...... .....|||++.|.|||||||.|||+.+||.|++++.......++
T Consensus 201 ~~~---------~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g 271 (596)
T KOG1177|consen 201 HPL---------PGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAG 271 (596)
T ss_pred CcC---------CCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhC
Confidence 321 1235678887766542211 12357899999999999999999999999999999998888899
Q ss_pred cCCCcEEEEcCChHHHHHHHH-HHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcch
Q 005991 294 FYPSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGT 370 (666)
Q Consensus 294 ~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 370 (666)
++..+++++..|++|.+|... ++.+|..|++++|+. +++...++.|.++|+|.++++|++|..|++.....-
T Consensus 272 ~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~----- 346 (596)
T KOG1177|consen 272 YNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQ----- 346 (596)
T ss_pred cCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhcc-----
Confidence 999999999999999999665 889999999999976 899999999999999999999999998875311110
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCC-ccccCcccchhh
Q 005991 371 LREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGC-QVMEGYGMTETS 449 (666)
Q Consensus 371 ~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~-~v~~~YG~TE~~ 449 (666)
+ -.+++|.++.||+++|+++++.+....+. .+...||+||++
T Consensus 347 --------------------------~-----------~~s~lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts 389 (596)
T KOG1177|consen 347 --------------------------V-----------DLSSLRKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETS 389 (596)
T ss_pred --------------------------C-----------chhhhhhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccC
Confidence 0 01489999999999999999999886654 377899999999
Q ss_pred hhhhccCCCC---CCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeec
Q 005991 450 CIISAIDKGD---NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHT 526 (666)
Q Consensus 450 ~~~~~~~~~~---~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~T 526 (666)
...+...+.+ ....++|..+++.|.+|+| .++...+.+. .||||+||+++|.|||++++.|++..+.|.||+|
T Consensus 390 ~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~~---~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~T 465 (596)
T KOG1177|consen 390 PVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLGT---KGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDT 465 (596)
T ss_pred cceeeecCCCCHHHHHhhhhhccccccccccc-CCCCccccCC---CceEEEEechhheeecCCcccchhhcccccceec
Confidence 8777665555 4567899999999999999 5556566665 6999999999999999999999999999999999
Q ss_pred ccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC--------hhH
Q 005991 527 GDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD--------PDV 595 (666)
Q Consensus 527 GDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~--------~~~ 595 (666)
||+|.+|++|+++|+||.+|+|+ ++|++|+|.|||+.|.+||.|.++.|+|.+++ +.++|.|.+. .|+
T Consensus 466 GDi~~m~enG~i~iVGRskdmI~-rGGENVyP~ElE~fL~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~~~t~E~ 544 (596)
T KOG1177|consen 466 GDIAVMDENGTIEIVGRSKDMII-RGGENVYPTELEDFLNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAEGKTTAET 544 (596)
T ss_pred CceEEEcCCCcEEEEEcccCeEE-eCCcccChHHHHHHHhhCCCeeeEEEEccCCCcccceEEEEEEeeccccccccHHH
Confidence 99999999999999999999999 59999999999999999999999999999876 5788888763 478
Q ss_pred HHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 596 LKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 596 l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
|++||+.+ +. +|++|++|++++ +|.+.+|||.|-++++.
T Consensus 545 lKa~Ck~k-la-----HFKiPky~vf~~~FPlT~tGKIqKFeir~~ 584 (596)
T KOG1177|consen 545 LKAMCKGK-LA-----HFKIPKYFVFVDEFPLTTTGKIQKFEIREM 584 (596)
T ss_pred HHHHHhcc-cc-----cccCCcEEEEeccCcccccccchhHHHHHH
Confidence 99999999 88 999999999995 88999999999999876
No 12
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-79 Score=655.15 Aligned_cols=489 Identities=28% Similarity=0.418 Sum_probs=410.8
Q ss_pred HHHHhCCCC-ceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCC--CCCCCEEEEEcCCCHhHHHHHHHHHhcCC
Q 005991 87 YAVENYPDY-KYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHG--LQKGVRIGLYLINRPEWLIVDHACSAYSY 163 (666)
Q Consensus 87 ~~a~~~pd~-~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~g--v~~gd~V~i~~~n~~e~~~~~lA~~~~G~ 163 (666)
+.+..++++ +++++. +. ..+.+||+|+.+++.++|.+|.++| +++||+|++++||+++++++++||+.+|+
T Consensus 24 ~~~~~~~~~~~~~i~~---~~---~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga 97 (537)
T KOG1176|consen 24 RPAFVYLDRNTSLVYQ---DS---DGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGA 97 (537)
T ss_pred ccccccccCcceEEEe---cC---CCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCc
Confidence 334444444 777765 21 1356999999999999999999876 88999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEe-hHHHHhc
Q 005991 164 ISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLIS-YLQLQSQ 242 (666)
Q Consensus 164 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 242 (666)
+..|+||.+.+.++.+.+++++++++|++....+.+.+....+. ..++++......... .......+ +..+...
T Consensus 98 ~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~--~~i~~l~~~~~~~~~---~~~~~~~~~~~~~~~~ 172 (537)
T KOG1176|consen 98 VLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA--LKIIVLTGDEGVISI---SDLVEDLDAFEDLMPE 172 (537)
T ss_pred cccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC--CceEEEecccCcccc---ccccccccchhhcccc
Confidence 99999999999999999999999999999999988877776655 344444432111000 00011112 4444443
Q ss_pred CCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHH-HHHh
Q 005991 243 GCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIV-SVYY 321 (666)
Q Consensus 243 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~-~l~~ 321 (666)
+.... ..+.+.+|++.|+|||||||.||||++||++++...........+...|+.++.+|++|.+|+...+. .+..
T Consensus 173 ~~~~~--~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~ 250 (537)
T KOG1176|consen 173 GLPDG--IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAG 250 (537)
T ss_pred CCCcc--cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHhC
Confidence 33222 44567799999999999999999999999999998877666677778999999999999999999776 5566
Q ss_pred CcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHH
Q 005991 322 GVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRL 400 (666)
Q Consensus 322 G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~ 400 (666)
|+++++.+ +++..+++.|++|++|+++++|.++..|.+.... .
T Consensus 251 ~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~----------------------------------~-- 294 (537)
T KOG1176|consen 251 GTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIV----------------------------------K-- 294 (537)
T ss_pred CceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCcc----------------------------------C--
Confidence 66666666 6999999999999999999999999998763100 0
Q ss_pred hhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhC-CccccCcccchhhhhhhccCCCC-CCCCCccCCccCcEEEEEe
Q 005991 401 VFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG-CQVMEGYGMTETSCIISAIDKGD-NLSGHVGSPNPACEIKLVD 478 (666)
Q Consensus 401 ~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~v~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~~~~~v~ivd 478 (666)
..-.+++|.+.+||+++++++.+.+++.++ ..+.++||+||+++.++.+...+ ..++++|++++++++++.+
T Consensus 295 ------~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~~v~~ 368 (537)
T KOG1176|consen 295 ------KYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPERKPGSVGRLLPGVRVKVLD 368 (537)
T ss_pred ------cccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCccCcccccCccccceEEEeeC
Confidence 001159999999999999999999999998 88999999999998777776655 4899999999988888887
Q ss_pred cCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeecc
Q 005991 479 VPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAP 558 (666)
Q Consensus 479 ~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p 558 (666)
+.+..+++++ .||||++|+++|+|||+||++|++.|+++|||||||+|++|+||+|+|+||+||+||. +|++|+|
T Consensus 369 -e~g~~l~~~~---~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~-~G~qv~P 443 (537)
T KOG1176|consen 369 -ETGVSLGPNQ---TGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKY-GGEQVSP 443 (537)
T ss_pred -CCCCCCCCCC---ceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhheee-CCEEeCH
Confidence 6777777776 8999999999999999999999999988899999999999999999999999999996 9999999
Q ss_pred HHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcchhHHH-HHHHH
Q 005991 559 EKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNL 628 (666)
Q Consensus 559 ~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~ 628 (666)
.|||++|..||.|.||+|+|.+|+ +.++|+||+. ++++.+|++++ ++ +|++|+.+.|++ +|++.
T Consensus 444 ~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~lte~di~~~v~k~-l~-----~y~~~~~V~Fvd~lPKs~ 517 (537)
T KOG1176|consen 444 AEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTLTEKDIIEYVRKK-LP-----AYKLPGGVVFVDELPKTP 517 (537)
T ss_pred HHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCcCCHHHHHHHHHhh-CC-----hhhccCeEEEeccCCCCC
Confidence 999999999999999999999876 7899999985 48999999999 98 799999999995 88888
Q ss_pred hhhhhhhhhccch
Q 005991 629 CQLYSSKELFRSR 641 (666)
Q Consensus 629 ~gK~~r~~l~~~~ 641 (666)
+||+.|+.|++..
T Consensus 518 ~GKi~R~~lr~~~ 530 (537)
T KOG1176|consen 518 NGKILRRKLRDIA 530 (537)
T ss_pred cchHHHHHHHHHH
Confidence 8999999998763
No 13
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2e-76 Score=653.70 Aligned_cols=497 Identities=29% Similarity=0.460 Sum_probs=419.3
Q ss_pred CCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH
Q 005991 76 PEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD 155 (666)
Q Consensus 76 ~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~ 155 (666)
....++.+++.+.++++|+++|+.+. +.. ..+||+||.++++++|++|++.|+++||+|+|+++|++++++++
T Consensus 8 ~~~~~~~~~l~~~a~~~~~~~a~~~~---~~~----~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~ 80 (534)
T COG0318 8 TAELTLASLLERAARRNPDRPALIFL---GRG----GRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAF 80 (534)
T ss_pred cccccHHHHHHHHHHhCCCceEEEEc---CCC----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 34578999999999999999999875 222 15999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEe
Q 005991 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLIS 235 (666)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (666)
|||+++|++++|||+.+..+++.++++++++++++++....+.+.......+....+........... .+
T Consensus 81 ~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 150 (534)
T COG0318 81 LAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLP----------IT 150 (534)
T ss_pred HHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEeccccccccc----------cc
Confidence 99999999999999999999999999999999999998855555554444333333332222110000 24
Q ss_pred hHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccc--cCCCcEEEEcCChHHHHHHH
Q 005991 236 YLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQ--FYPSDIYMSYLPLAHIYERA 313 (666)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~--~~~~d~~l~~~pl~h~~~~~ 313 (666)
+++...............+++|+++|+|||||||.||||++||+|+..+.......+. +.+.|++++++|++|.+|+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~ 230 (534)
T COG0318 151 LEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLI 230 (534)
T ss_pred HHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHH
Confidence 5555333222222222367999999999999999999999999999999888888777 89999999999999999999
Q ss_pred HHHH-HHHhCcEEEEec---CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHc
Q 005991 314 NQIV-SVYYGVAVGFYQ---GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVS 389 (666)
Q Consensus 314 ~~~~-~l~~G~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~ 389 (666)
..+. +++.|+++++.+ +++..++..+.++++|++.++|+++..++......-
T Consensus 231 ~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~------------------------ 286 (534)
T COG0318 231 VGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDD------------------------ 286 (534)
T ss_pred HHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCc------------------------
Confidence 8655 599999999987 799999999999999999999999999876311100
Q ss_pred CCCCChhhhHHhhHHHHHHhCC-ceEEEEecCCCCcHHHHHHHHHHhC-CccccCcccchhhhhhhccCCCC--CCCCCc
Q 005991 390 GQTPSKMWDRLVFNKIRERLGG-RVRFMGSGASPLSPDVMDFLKVCFG-CQVMEGYGMTETSCIISAIDKGD--NLSGHV 465 (666)
Q Consensus 390 ~~~~~~~~d~~~~~~~~~~~~~-~lr~i~~gG~~l~~~~~~~~~~~~~-~~v~~~YG~TE~~~~~~~~~~~~--~~~~~v 465 (666)
.... ++|.+++||+++++++.+++++.++ ..++++||+||++..++.....+ ...+++
T Consensus 287 ------------------~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~ 348 (534)
T COG0318 287 ------------------DDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDDLLAKPGSV 348 (534)
T ss_pred ------------------cccccceEEEEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCchhhhcCCcc
Confidence 0001 4999999999999999999999897 47999999999998777766655 467888
Q ss_pred cCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCC
Q 005991 466 GSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKK 545 (666)
Q Consensus 466 G~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~ 545 (666)
|+|+|+++++|+|.++....+ +++|||||+||+++.|||++|+.|++.|+.+|||+|||+|++|+||+++|+||.|
T Consensus 349 G~~~pg~~v~Ivd~~~~~~~p----g~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~k 424 (534)
T COG0318 349 GRPLPGVEVRIVDPDGGEVLP----GEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLK 424 (534)
T ss_pred cccCCCcEEEEEeCCCCccCC----CCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccc
Confidence 999999999999965543333 3489999999999999999999999999667999999999999999999999999
Q ss_pred CeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC--------hhHHHHHHHHcCCCcccccccc
Q 005991 546 NIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD--------PDVLKDWAASQGIKVIYCFSFR 614 (666)
Q Consensus 546 d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~--------~~~l~~~~~~~~l~~~~~~~~~ 614 (666)
|+|+. +|++|+|.|||+++.+||.|.+|+|+|.+++ +.++|+|+++ ++++.++++.+ ++ .|+
T Consensus 425 d~I~~-gG~ni~p~eiE~~l~~~~~V~~aavvgvpd~~~Ge~~~a~v~~~~~~~~~~~~~~i~~~~~~~-l~-----~~~ 497 (534)
T COG0318 425 DLIIS-GGENIYPEEIEAVLAEHPAVAEAAVVGVPDERWGERVVAVVVLKPGGDAELTAEELRAFLRKR-LA-----LYK 497 (534)
T ss_pred eEEEe-CCeEECHHHHHHHHHhCCCcceEEEEeCCCCccCceEEEEEEEcCCCCCCCCHHHHHHHHHhh-hh-----ccc
Confidence 99995 9999999999999999999999999998865 7899999973 68999999997 88 999
Q ss_pred cCcchhHHH-HHHHHhhhhhhhhhccchh
Q 005991 615 ANSHVIFIA-LIHNLCQLYSSKELFRSRC 642 (666)
Q Consensus 615 ~p~~i~~v~-~~~~~~gK~~r~~l~~~~~ 642 (666)
+|+++.+++ +|++.+||++|+.|++...
T Consensus 498 ~P~~v~~v~~lP~t~sGKi~r~~lr~~~~ 526 (534)
T COG0318 498 VPRIVVFVDELPRTASGKIDRRALREEYR 526 (534)
T ss_pred CCeEEEEeCCCCCCCchhhhHHHHHHHHH
Confidence 999999995 8888889999999998744
No 14
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=5e-73 Score=601.23 Aligned_cols=485 Identities=22% Similarity=0.304 Sum_probs=398.2
Q ss_pred HHHHHHHHHh-CCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCHhHHHHHHHHH
Q 005991 82 HDNFIYAVEN-YPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINRPEWLIVDHACS 159 (666)
Q Consensus 82 ~~~~~~~a~~-~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~-~gv~~gd~V~i~~~n~~e~~~~~lA~~ 159 (666)
+.+++++.+. .+|+.|+++. +.. +..+.+||+||.++++++|+.|++ .|+ +||||+|++||.+|.++++|||+
T Consensus 12 ~n~~dr~~~~~~~~~~aii~~---~e~-~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~ 86 (528)
T COG0365 12 LNALDRHLEADRPDDTAIIFD---GED-GLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATA 86 (528)
T ss_pred hhhhhhhhhccCCCceEEEEE---cCC-CCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHH
Confidence 4456777664 4689999886 332 223889999999999999999987 578 99999999999999999999999
Q ss_pred hcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHh--hhcCCC-ceEEEEeCCCCCCCCCCCCCCCcEEEeh
Q 005991 160 AYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSF--ISEIPS-VHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (666)
Q Consensus 160 ~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~--~~~~~~-l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (666)
++|++.+|+.+.++++++++.+++++++++|+++......... ...... +..+++.... + +.|
T Consensus 87 riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~-----------~---~~~ 152 (528)
T COG0365 87 RIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRL-----------G---LWY 152 (528)
T ss_pred HcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEeccc-----------c---ccH
Confidence 9999999999999999999999999999999987654322111 000000 0013332221 1 567
Q ss_pred HHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhc-ccccccCCCcEEEEcCChHHHHHHHH-
Q 005991 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGF-SLMVQFYPSDIYMSYLPLAHIYERAN- 314 (666)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~-~~~~~~~~~d~~l~~~pl~h~~~~~~- 314 (666)
.++....... .+..+.+++|+++|+|||||||+||||+++|++++...... ...+.+.++|++++..++.|++|...
T Consensus 153 ~~~~~~~~~~-~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~ 231 (528)
T COG0365 153 DEAVEKASEK-FEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYS 231 (528)
T ss_pred HHHhhccCCC-CCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHH
Confidence 7776554332 23344789999999999999999999999999766655443 34577789999999999999999998
Q ss_pred HHHHHHhCcEEEEecC----CHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcC
Q 005991 315 QIVSVYYGVAVGFYQG----DNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSG 390 (666)
Q Consensus 315 ~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~ 390 (666)
++.+|..|++++++.+ ++..+++.|+++++|.+++.|+.++.|.+...
T Consensus 232 v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~---------------------------- 283 (528)
T COG0365 232 VFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGL---------------------------- 283 (528)
T ss_pred HHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCC----------------------------
Confidence 7889999999999872 38899999999999999999999999876311
Q ss_pred CCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCcc
Q 005991 391 QTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNP 470 (666)
Q Consensus 391 ~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~ 470 (666)
.++...++||.+.+.||||+++.++++.+.+|++|.+.||+||++.+.....+ +...++.|.|+|
T Consensus 284 --------------~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~g~~i~d~~gqTEtg~~~~~~~~-~~~~g~~g~p~p 348 (528)
T COG0365 284 --------------GEPYDLSSLRVLGSAGEPLNPEAFEWFYSALGVWILDIYGQTETGMGFIAGRP-PVKNGSSGLPLP 348 (528)
T ss_pred --------------cccccchhheeeeccCCCCCHHHHHHHHHHhCCCEeccccccccCccccCCCC-CcCCCCCCCCCC
Confidence 01111258999999999999999999999999999999999999955554444 556666699999
Q ss_pred CcEEEEEecCCCCCCCCCCCCCccEEEEeCC--CcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeE
Q 005991 471 ACEIKLVDVPEMNYTSEDQPHPRGEICVRGP--IVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIF 548 (666)
Q Consensus 471 ~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~--~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~i 548 (666)
|+++.++|. +++.++.+ . |+|+++.+ ++++|||+||+.+.+++-+ +||+|||.+++|+||+++|+||.||+|
T Consensus 349 G~~~~vvdd-~g~~~~~~---~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~-~~y~tGD~~~~DedGy~~i~GR~DDvI 422 (528)
T COG0365 349 GYAVRRVDD-EGNPVPPG---V-GELVVRLPWPGMALTYWNDPERYKEAYFG-RWYRTGDWAERDEDGYFWLHGRSDDVI 422 (528)
T ss_pred CceeEEECC-CCCcCCCC---c-eEEEEeCCCchhhhhhhCCHHHHHHHHhh-ceeecCceeEEccCCCEEEEeeccceE
Confidence 999999994 46655444 4 99999987 9999999999999999843 399999999999999999999999999
Q ss_pred EcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC--------hhHHHHHHHHcCCCcccccccccCc
Q 005991 549 KLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD--------PDVLKDWAASQGIKVIYCFSFRANS 617 (666)
Q Consensus 549 kl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~--------~~~l~~~~~~~~l~~~~~~~~~~p~ 617 (666)
|+ .|+||.|.|||++|.+||.|.||+|+|.++. +.++|||++. .++|++++++. +. .+..|+
T Consensus 423 ~v-sG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~kg~~v~afVvL~~g~~~~~L~~ei~~~vr~~-~~-----~~~~p~ 495 (528)
T COG0365 423 KV-SGKRIGPLEIESVLLAHPAVAEAAVVGVPDPGKGQIVLAFVVLAAGVEPNELAEEIRRHVARN-IG-----PHAIPR 495 (528)
T ss_pred ec-cCeeccHHHHHHHHHhCcceeeeEEEeccCCCCCcEEEEEEEecCCCChHHHHHHHHHHHHhc-cC-----cccCCc
Confidence 97 6999999999999999999999999998765 5789999986 35677777776 66 799999
Q ss_pred chhHH-HHHHHHhhhhhhhhhccchh
Q 005991 618 HVIFI-ALIHNLCQLYSSKELFRSRC 642 (666)
Q Consensus 618 ~i~~v-~~~~~~~gK~~r~~l~~~~~ 642 (666)
+|.|| ++|+|.+|||.|+.||+...
T Consensus 496 ~i~fv~~LPkT~sGKI~R~~lr~~~~ 521 (528)
T COG0365 496 KIRFVDELPKTASGKIQRRLLRKILH 521 (528)
T ss_pred eEEEecCCCCCCcccHHHHHHHHHHh
Confidence 99999 59999999999999998744
No 15
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.4e-72 Score=631.89 Aligned_cols=516 Identities=16% Similarity=0.175 Sum_probs=404.2
Q ss_pred CCCCCCHHHHHHHHHHh--CCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHH
Q 005991 75 HPEIGTLHDNFIYAVEN--YPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWL 152 (666)
Q Consensus 75 ~~~~~tl~~~~~~~a~~--~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~ 152 (666)
....++..++++++++. +||++|+++. ....+..+.+||+||.++++++|++|+++|+++||+|+++++|++|++
T Consensus 55 ~~~~n~~~~~l~~~~~~~~~~~~~A~~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~ 131 (647)
T PTZ00237 55 GGELNTCYNVLDIHVKNPLKRDQDALIYE---CPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPL 131 (647)
T ss_pred CCeeeHHHHHHHHhhcccCCCCceEEEEE---cCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH
Confidence 45667889999988765 7999999874 221123477999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccc---------cHHHHHHhhhcCC-CceEEEEeCCCC---
Q 005991 153 IVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQ---------TLNTLLSFISEIP-SVHLIVVVGGKD--- 219 (666)
Q Consensus 153 ~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~---------~~~~~~~~~~~~~-~l~~ii~~~~~~--- 219 (666)
+++|||+++|++++|+++.++++++.++|++++++++|+++. ..+.+.+...... ....++.+....
T Consensus 132 ~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 211 (647)
T PTZ00237 132 IAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITS 211 (647)
T ss_pred HHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCccc
Confidence 999999999999999999999999999999999999999752 2233333332111 123444432111
Q ss_pred -CCCCCCCC-CCCcEEEehHHHHhcCC----CCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHH-HHHHHhhccccc
Q 005991 220 -EHLPSLPS-TSGVKLISYLQLQSQGC----SSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGN-LISNVAGFSLMV 292 (666)
Q Consensus 220 -~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~-l~~~~~~~~~~~ 292 (666)
........ ........|++++.... .........+++|+++|+|||||||.||||+++|++ +.+....+....
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~ 291 (647)
T PTZ00237 212 ESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSII 291 (647)
T ss_pred ccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhc
Confidence 00000000 00001245666654321 111122345789999999999999999999999998 544333334445
Q ss_pred ccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEecCC-------HHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHH
Q 005991 293 QFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQGD-------NLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAV 365 (666)
Q Consensus 293 ~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~-------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 365 (666)
....+|+++++.|+.|+.+...++.+++.|+++++++++ +..+++.++++++|++.++|+++..|.+......
T Consensus 292 ~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~ 371 (647)
T PTZ00237 292 EKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEAT 371 (647)
T ss_pred CCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCcccc
Confidence 677889999999999987766678899999999998743 6789999999999999999999998865210000
Q ss_pred hhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCccc
Q 005991 366 KASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGM 445 (666)
Q Consensus 366 ~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~ 445 (666)
... .....++||.+++||+++++++.+++++.+|+++++.||+
T Consensus 372 -----------------------------~~~--------~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~ 414 (647)
T PTZ00237 372 -----------------------------IIR--------SKYDLSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQ 414 (647)
T ss_pred -----------------------------ccc--------cccCcchheEEEecCccCCHHHHHHHHHhcCCCEEeeech
Confidence 000 0000148999999999999999999999899999999999
Q ss_pred chhhhhhhccCCCC-CCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCC---CcCccccCChhhhhhccCC-
Q 005991 446 TETSCIISAIDKGD-NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGP---IVFQGYYKNEVQTREVIDG- 520 (666)
Q Consensus 446 TE~~~~~~~~~~~~-~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~---~v~~GY~~~~~~t~~~~~~- 520 (666)
||+++.++...... ...+++|+|+|+++++|+| ++++.++.++ .|||+++|| +++.|||++++.|++.|..
T Consensus 415 TE~~~~~~~~~~~~~~~~~s~G~p~~g~~~~i~d-~~g~~~~~ge---~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~ 490 (647)
T PTZ00237 415 TEIGITYLYCYGHINIPYNATGVPSIFIKPSILS-EDGKELNVNE---IGEVAFKLPMPPSFATTFYKNDEKFKQLFSKF 490 (647)
T ss_pred HHhChhhhccCCCCCCCCCCCccCcCCceEEEEC-CCCCCCCCCC---ceEEEEeccCCchhhCceeCCHHHHHHHHhCC
Confidence 99986655433322 3348999999999999999 5666666554 899999986 7899999999999988854
Q ss_pred CCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh----
Q 005991 521 DGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP---- 593 (666)
Q Consensus 521 ~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~---- 593 (666)
+|||+|||+|++|+||+|+|+||+||+||+ +|+||+|.|||++|.+||.|.+|+|+|.+++ +.++|+|++++
T Consensus 491 ~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~-~G~rI~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~ 569 (647)
T PTZ00237 491 PGYYNSGDLGFKDENGYYTIVSRSDDQIKI-SGNKVQLNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQSN 569 (647)
T ss_pred CCEEECCcEEEECCCCeEEEEeccCCEEEE-CCEEeCHHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCccc
Confidence 799999999999999999999999999997 7999999999999999999999999998764 68999999752
Q ss_pred ---------hHHHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccch
Q 005991 594 ---------DVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRSR 641 (666)
Q Consensus 594 ---------~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~~ 641 (666)
++++++++++ ++ .+++|+.|++++ +|++.+||++|+.|++.-
T Consensus 570 ~~~~~~~l~~~i~~~~~~~-l~-----~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~ 621 (647)
T PTZ00237 570 QSIDLNKLKNEINNIITQD-IE-----SLAVLRKIIIVNQLPKTKTGKIPRQIISKFL 621 (647)
T ss_pred cCCCHHHHHHHHHHHHHhh-cC-----ccccCcEEEEcCCCCCCCCccEeHHHHHHHH
Confidence 3456778877 87 999999999995 888889999999998763
No 16
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1.4e-71 Score=622.44 Aligned_cols=497 Identities=21% Similarity=0.270 Sum_probs=403.3
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
..-|+.++|++.++++|+++|+... + +.+||+||.++++++|++|.++|+++||+|+|+++|+++|+++++
T Consensus 5 ~~~~~~~~~~~~~~~~p~~~a~~~~---~------~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~l 75 (563)
T PLN02860 5 SQAHICQCLTRLATLRGNAVVTISG---N------RRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLL 75 (563)
T ss_pred hhhHHHHHHHHHHHhcCCceEEecC---C------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHH
Confidence 4468999999999999999999642 2 359999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhh-hcCCCceEEEEeCCCCCCCCCCCCCCCcEEEe
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI-SEIPSVHLIVVVGGKDEHLPSLPSTSGVKLIS 235 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (666)
||+++|++++||++.++.+++.++++++++++++++........... ..++.++.++..++...... .....+.+
T Consensus 76 a~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~ 151 (563)
T PLN02860 76 AVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVF----IFLNSFLT 151 (563)
T ss_pred HHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccc----cchhhccc
Confidence 99999999999999999999999999999999999876533332221 23455555555443210000 00001112
Q ss_pred hHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHH
Q 005991 236 YLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQ 315 (666)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~ 315 (666)
++++...+...........++++++|+|||||||.||||++||++++.........+++.++|++++.+|++|.+++...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 231 (563)
T PLN02860 152 TEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 231 (563)
T ss_pred cchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHHH
Confidence 22222111111111123467899999999999999999999999998877666666788899999999999999999888
Q ss_pred HHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCC
Q 005991 316 IVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPS 394 (666)
Q Consensus 316 ~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~ 394 (666)
+.++..|+++++.+ +++..+++.++++++|++.++|+++..|.+......
T Consensus 232 ~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~----------------------------- 282 (563)
T PLN02860 232 LAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSM----------------------------- 282 (563)
T ss_pred HHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhh-----------------------------
Confidence 88999999998877 799999999999999999999999998876321000
Q ss_pred hhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCCCC--------------
Q 005991 395 KMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGD-------------- 459 (666)
Q Consensus 395 ~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~-------------- 459 (666)
.....+++|.+++||+++++++.+.+++.+ ++++++.||+||+++.++.....+
T Consensus 283 -----------~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (563)
T PLN02860 283 -----------TWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVN 351 (563)
T ss_pred -----------ccccccceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCCccccCcccccccccccccccchhhhhhhc
Confidence 000114899999999999999999999888 789999999999976544322111
Q ss_pred ---------CCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEE
Q 005991 460 ---------NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIG 530 (666)
Q Consensus 460 ---------~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg 530 (666)
....++|+|+|+++++|++.+ +++.|||+++|++++.|||++|+.|++.|+.+|||+|||+|
T Consensus 352 ~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~---------~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~ 422 (563)
T PLN02860 352 QTKSSSVHQPQGVCVGKPAPHVELKIGLDE---------SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIG 422 (563)
T ss_pred ccccccccccCCcccCCccCCcEEEEecCC---------CCceeEEEEecCcccccccCCccccchhccCCCeEEccceE
Confidence 112378999999999999832 23589999999999999999999999999889999999999
Q ss_pred EEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh--------------
Q 005991 531 LWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP-------------- 593 (666)
Q Consensus 531 ~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~-------------- 593 (666)
++|+||+++|+||+||+||+ +|++|+|.|||+++.+||+|.+|+|++.+++ +.++|+|++.+
T Consensus 423 ~~d~dG~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~ 501 (563)
T PLN02860 423 WIDKAGNLWLIGRSNDRIKT-GGENVYPEEVEAVLSQHPGVASVVVVGVPDSRLTEMVVACVRLRDGWIWSDNEKENAKK 501 (563)
T ss_pred EEcCCCCEEEeecccceeEE-CCEEccHHHHHHHHHhCCCcceeEEEEEecCcCCceEEEEEEECCccccccccchhhcc
Confidence 99999999999999999997 8999999999999999999999999997654 68899998642
Q ss_pred ------hHHHHHHHHcCCCcccccccccCcchhHH-H-HHHHHhhhhhhhhhccch
Q 005991 594 ------DVLKDWAASQGIKVIYCFSFRANSHVIFI-A-LIHNLCQLYSSKELFRSR 641 (666)
Q Consensus 594 ------~~l~~~~~~~~l~~~~~~~~~~p~~i~~v-~-~~~~~~gK~~r~~l~~~~ 641 (666)
+.+++++++++|+ .|++|+.++++ + +|++.+||++|++|++.-
T Consensus 502 ~~~~~~~~l~~~~~~~~L~-----~~~~P~~~~~~~~~lP~t~~GKi~r~~L~~~~ 552 (563)
T PLN02860 502 NLTLSSETLRHHCREKNLS-----RFKIPKLFVQWRKPFPLTTTGKIRRDEVRREV 552 (563)
T ss_pred cccccHHHHHHHHhhCccc-----ccccceEEEEEecCCCCCcccchhHHHHHHHH
Confidence 4678888875588 99999988764 5 899999999999998763
No 17
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=8.5e-71 Score=624.77 Aligned_cols=525 Identities=17% Similarity=0.184 Sum_probs=408.5
Q ss_pred CCCCHHHHHHHHHH-hCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH
Q 005991 77 EIGTLHDNFIYAVE-NYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD 155 (666)
Q Consensus 77 ~~~tl~~~~~~~a~-~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~ 155 (666)
..+..+++|+++++ .+|+++|+++. ....+..+.+||+||.++++++|++|+++|+++||+|+++++|++|+++++
T Consensus 86 ~~N~~~~~l~~~~~~~~~~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~ 162 (666)
T PLN02654 86 KTNICYNCLDRNVEAGNGDKIAIYWE---GNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAM 162 (666)
T ss_pred EeeHHHHHHHHhhccCCCCCEEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 45566888888876 48999999874 222234578999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHH---------HHHHhhhcC----CCceEEEEeCCCCCCC
Q 005991 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLN---------TLLSFISEI----PSVHLIVVVGGKDEHL 222 (666)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~----~~l~~ii~~~~~~~~~ 222 (666)
|||+++|++++|+++.++++++.+++++++++++|++..... .+....... .....++..+......
T Consensus 163 lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (666)
T PLN02654 163 LACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMK 242 (666)
T ss_pred HHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEeccccccc
Confidence 999999999999999999999999999999999999865321 122211111 1112222222211000
Q ss_pred CCCCCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHH-HhhcccccccCCCcEEE
Q 005991 223 PSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISN-VAGFSLMVQFYPSDIYM 301 (666)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~-~~~~~~~~~~~~~d~~l 301 (666)
.............|+++..... ...+.....++|+++|+|||||||.||||+++|++++.. .......+++.++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~ 321 (666)
T PLN02654 243 REDTKWQEGRDVWWQDVVPNYP-TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYW 321 (666)
T ss_pred ccccccccCCcccHHHHhhcCC-CCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEE
Confidence 0000000011234555543211 111223357899999999999999999999999997643 34455567889999999
Q ss_pred EcCChHHHHHHHH-HHHHHHhCcEEEEec-----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHH
Q 005991 302 SYLPLAHIYERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKL 375 (666)
Q Consensus 302 ~~~pl~h~~~~~~-~~~~l~~G~~~~~~~-----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l 375 (666)
+.+|+.|+++... ++.+|+.|+++++++ .++..+++.|+++++|++.++|+++..|.+.......
T Consensus 322 ~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~--------- 392 (666)
T PLN02654 322 CTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVT--------- 392 (666)
T ss_pred EcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccc---------
Confidence 9999999998766 668899999999986 3789999999999999999999999988753110000
Q ss_pred HHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhC---CccccCcccchhhhhh
Q 005991 376 FTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG---CQVMEGYGMTETSCII 452 (666)
Q Consensus 376 ~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~---~~v~~~YG~TE~~~~~ 452 (666)
-++ .+++|.+++||+++++++.+++.+.+| +++.+.||+||+++..
T Consensus 393 --------------------~~~-----------l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~ 441 (666)
T PLN02654 393 --------------------RHS-----------RKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFM 441 (666)
T ss_pred --------------------cCC-----------hhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCee
Confidence 000 148999999999999999999998887 7899999999998765
Q ss_pred hccCCC--CCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeC--CCcCccccCChhhhhhccC--CCCeeec
Q 005991 453 SAIDKG--DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRG--PIVFQGYYKNEVQTREVID--GDGWLHT 526 (666)
Q Consensus 453 ~~~~~~--~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g--~~v~~GY~~~~~~t~~~~~--~~gw~~T 526 (666)
+...+. ...++++|+|++|++++|+| ++++.++.+ ..|||+|++ |+++.|||++++.+++.+. .+|||+|
T Consensus 442 ~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~~~~~---~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~T 517 (666)
T PLN02654 442 ITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGKEIEGE---CSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFS 517 (666)
T ss_pred eccCCCCCCCCCCccCCCCCCceEEEEC-CCCCCCCCC---CceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEe
Confidence 544332 34678999999999999999 555655443 379999999 7899999999999987652 3799999
Q ss_pred ccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh---------h
Q 005991 527 GDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP---------D 594 (666)
Q Consensus 527 GDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~---------~ 594 (666)
||+|++|+||+++|+||+||+||+ +|+||+|.|||+++.+||+|.+|+|+|.+++ +.++|+|++.+ +
T Consensus 518 GD~~~~d~dG~l~i~GR~dd~I~~-~G~ri~p~EIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~~~~l~~ 596 (666)
T PLN02654 518 GDGCSRDKDGYYWLTGRVDDVINV-SGHRIGTAEVESALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVPYSEELRK 596 (666)
T ss_pred CceEEECCCCcEEEeeeccCeEEe-CCEEECHHHHHHHHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHH
Confidence 999999999999999999999997 8999999999999999999999999998764 57899998643 2
Q ss_pred HHHHHHHHcCCCcccccccccCcchhHH-HHHHHHhhhhhhhhhccchh--hhhcCCCccceehh
Q 005991 595 VLKDWAASQGIKVIYCFSFRANSHVIFI-ALIHNLCQLYSSKELFRSRC--CYRTGRDSSVFCQE 656 (666)
Q Consensus 595 ~l~~~~~~~~l~~~~~~~~~~p~~i~~v-~~~~~~~gK~~r~~l~~~~~--~~~~~~~~~~~~~~ 656 (666)
+++++++++ |+ .+++|+.|.++ ++|++.+||++|+.|++... ..--+..|++-.++
T Consensus 597 ~l~~~~~~~-L~-----~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~~~~~~~~~~~~~~~ 655 (666)
T PLN02654 597 SLILTVRNQ-IG-----AFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPG 655 (666)
T ss_pred HHHHHHHHh-CC-----CCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCCCCCCCCcccccCHH
Confidence 677888888 88 99999999999 48899999999999988743 12234455544443
No 18
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.2e-70 Score=610.70 Aligned_cols=489 Identities=20% Similarity=0.205 Sum_probs=396.0
Q ss_pred CCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005991 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (666)
Q Consensus 78 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA 157 (666)
..++.+.|.+.++++|+++|+.+. + .+.+||+||.++++++|++|.+. +||+|+|+++|+++|+++++|
T Consensus 18 ~~~~~~~~~~~~~~~p~~~a~~~~---~-----~~~~Ty~el~~~~~~lA~~L~~~---~gd~Val~~~n~~e~~~~~lA 86 (539)
T PRK06334 18 GKTVLESFLKLCSEMTTATVCWDE---Q-----LGKLSYNQVRKAVIALATKVSKY---PDQHIGIMMPASAGAYIAYFA 86 (539)
T ss_pred CCcHHHHHHHHHHhCCCceEEEeC---C-----CCcccHHHHHHHHHHHHHHHhhc---cCCeEEEEcCCchHHHHHHHH
Confidence 478999999999999999998643 2 13599999999999999999873 899999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCC-ceEEEEeCCCCCCCCCCCCCCCcEEEeh
Q 005991 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPS-VHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (666)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (666)
|+++|++++|+++.++.+++.++|+++++++++++.+....+.+....... ...++.+++.... ..+
T Consensus 87 ~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------------~~~ 154 (539)
T PRK06334 87 TLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKE------------LSF 154 (539)
T ss_pred HHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhh------------ccH
Confidence 999999999999999999999999999999999998766655443321110 1123333321100 011
Q ss_pred HHHHhcCC----CC-----CCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChH
Q 005991 237 LQLQSQGC----SS-----PQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLA 307 (666)
Q Consensus 237 ~~~~~~~~----~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~ 307 (666)
.+....+. .. ........++++++|+|||||||.||||++||+++..........+++.++|++++++|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~ 234 (539)
T PRK06334 155 WEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPF 234 (539)
T ss_pred HHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchH
Confidence 11100000 00 0011235679999999999999999999999999998877776677888999999999999
Q ss_pred HHHHHHH-HHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 005991 308 HIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKK 384 (666)
Q Consensus 308 h~~~~~~-~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~ 384 (666)
|.+++.. .+.++..|+++++.. .++..+++.|+++++|++.++|+++..|++......
T Consensus 235 h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~------------------- 295 (539)
T PRK06334 235 HAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQE------------------- 295 (539)
T ss_pred hhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcc-------------------
Confidence 9999875 677899999998875 689999999999999999999999998876321100
Q ss_pred HHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCCCC-CCC
Q 005991 385 QAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGD-NLS 462 (666)
Q Consensus 385 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~-~~~ 462 (666)
...+++|.+++||+++++++.+++.+.+ ++.+++.||+||++.+++...... ...
T Consensus 296 -----------------------~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~ 352 (539)
T PRK06334 296 -----------------------SCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITINTVNSPKHE 352 (539)
T ss_pred -----------------------cccccccEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEeccCCCCCCC
Confidence 0014899999999999999999999888 689999999999987666544322 345
Q ss_pred CCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhcc-CCCCeeecccEEEEecCCcEEEE
Q 005991 463 GHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVI-DGDGWLHTGDIGLWLPGGRLKII 541 (666)
Q Consensus 463 ~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~-~~~gw~~TGDlg~~~~dG~l~i~ 541 (666)
+++|+|+++++++|+|.+++..++.|+ .|||+|+|++++.|||++++.+.... +++|||+|||+|++|++|+|+|+
T Consensus 353 ~~vG~p~~g~~v~i~d~~~~~~~~~g~---~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~ 429 (539)
T PRK06334 353 SCVGMPIRGMDVLIVSEETKVPVSSGE---TGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFLK 429 (539)
T ss_pred CcCceecCCCEEEEEcCCCCccCCCCc---eEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECCCCeEEEE
Confidence 689999999999999965666666665 89999999999999999998765432 45789999999999999999999
Q ss_pred ccCCCeEEcCCeeeeccHHHHHHHhcCcCcce------EEEEEeCCCC-eEEEEEEc--ChhHHHHHHHHcCCCcccccc
Q 005991 542 DRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQ------CFIYGDSFNS-CLVAIVAV--DPDVLKDWAASQGIKVIYCFS 612 (666)
Q Consensus 542 GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~------~~V~g~~~~~-~~va~vv~--~~~~l~~~~~~~~l~~~~~~~ 612 (666)
||.||+||+ +|++|+|.|||++|.+||+|.+ ++|++.+++. .++++++. +.++++++++++.++ .
T Consensus 430 GR~~d~ik~-~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~ 503 (539)
T PRK06334 430 GRLSRFVKI-GAEMVSLEALESILMEGFGQNAADHAGPLVVCGLPGEKVRLCLFTTFPTSISEVNDILKNSKTS-----S 503 (539)
T ss_pred eccCCeEEE-CCEEECHHHHHHHHHHccCCccccccCceEEEcCCCCceEEEEEEeccCChHHHHHHHHhcCCc-----c
Confidence 999999997 8999999999999999999998 7888887653 45566654 457889999886466 8
Q ss_pred cccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 613 FRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 613 ~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
|+.|+.+.+++ +|++.+||++|++|++.
T Consensus 504 ~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 532 (539)
T PRK06334 504 ILKISYHHQVESIPMLGTGKPDYCSLNAL 532 (539)
T ss_pred cccchheeeecccccccCCcccHHHHHHH
Confidence 99999998885 88888999999999875
No 19
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=2.7e-70 Score=618.95 Aligned_cols=510 Identities=16% Similarity=0.173 Sum_probs=408.4
Q ss_pred CCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH
Q 005991 76 PEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD 155 (666)
Q Consensus 76 ~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~ 155 (666)
...+..+++|.++++.+|+++|+++. +...++.+.+||+||.++++++|++|+++|+++||+|+++++|++++++++
T Consensus 49 ~~~n~~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~ 125 (628)
T TIGR02316 49 GRTNLCHNALDRHLDERGEQLALVTV---SSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAM 125 (628)
T ss_pred CEeeHHHHHHHHHhCcCCCCeEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 34566788999988899999999875 322234578999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEcccc---------HHHHHHhhhcC-CCceEEEEeCCCCCCCCCC
Q 005991 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT---------LNTLLSFISEI-PSVHLIVVVGGKDEHLPSL 225 (666)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~-~~l~~ii~~~~~~~~~~~~ 225 (666)
|||+++|++++|+++.++.+++.+++++++++++|+++.. ...+.+..... +....++.++....... .
T Consensus 126 lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~-~ 204 (628)
T TIGR02316 126 LACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPMR-L 204 (628)
T ss_pred HHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcC-c
Confidence 9999999999999999999999999999999999997642 22222222222 23455666653211100 0
Q ss_pred CCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHH-HhhcccccccCCCcEEEEcC
Q 005991 226 PSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISN-VAGFSLMVQFYPSDIYMSYL 304 (666)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~-~~~~~~~~~~~~~d~~l~~~ 304 (666)
......+|.++.........+.....++++++|+|||||||.||||+++|++++.. .......+++.++|++++.+
T Consensus 205 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~ 281 (628)
T TIGR02316 205 ---IPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSAS 281 (628)
T ss_pred ---ccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcC
Confidence 00012456665543222112222346899999999999999999999999997543 34445557888999999999
Q ss_pred ChHHHHHHHH-HHHHHHhCcEEEEec-----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHH
Q 005991 305 PLAHIYERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTA 378 (666)
Q Consensus 305 pl~h~~~~~~-~~~~l~~G~~~~~~~-----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~ 378 (666)
|+.|+.+... ++.+|+.|+++++++ .++..+++.|+++++|+++++|+++..|.+.....
T Consensus 282 ~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~-------------- 347 (628)
T TIGR02316 282 DVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAW-------------- 347 (628)
T ss_pred CCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcc--------------
Confidence 9999998754 678899999999986 37889999999999999999999998775421000
Q ss_pred HHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC
Q 005991 379 AYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG 458 (666)
Q Consensus 379 ~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~ 458 (666)
.+....++||.+++||+++++++.+++++.+|..+++.||+||++..++.....
T Consensus 348 --------------------------~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~ 401 (628)
T TIGR02316 348 --------------------------LRKHDLSSLHWLFLAGEPLDEPTAHWITDGLGKPVIDNYWQTETGWPVLAIMPG 401 (628)
T ss_pred --------------------------cccCCccceeEEEEecCCCCHHHHHHHHHHhCCCEEecccccccCceeecCCCC
Confidence 000011489999999999999999999998999999999999998544332221
Q ss_pred ----CCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCC---CcCccccCChhhhhhcc---CCCCeeeccc
Q 005991 459 ----DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGP---IVFQGYYKNEVQTREVI---DGDGWLHTGD 528 (666)
Q Consensus 459 ----~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~---~v~~GY~~~~~~t~~~~---~~~gw~~TGD 528 (666)
....+++|+|+||++++|+|.++++.++.++ .|||+++|| +++.|||++++.+.+.+ ..++||+|||
T Consensus 402 ~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~---~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD 478 (628)
T TIGR02316 402 LDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNE---KGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFD 478 (628)
T ss_pred CCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCC---cEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCc
Confidence 2356889999999999999965677776665 899999998 57899999998887754 2578999999
Q ss_pred EEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC-------------
Q 005991 529 IGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------------- 592 (666)
Q Consensus 529 lg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------------- 592 (666)
+|++|+||+|+|+||+||+||+ +|+||+|.|||++|.+||+|.+|+|++.+++ +.++++|++.
T Consensus 479 ~g~~d~dG~l~i~GR~dd~ik~-~G~rv~~~eIE~~l~~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~ 557 (628)
T TIGR02316 479 WGIRDEDGYTFILGRTDDVINV-AGHRLGTREIEESVSSHPSVAEVAVVGVHDELKGQVAVVFAILKESDSAGDAHDPHA 557 (628)
T ss_pred eEEEcCCCcEEEEEcCcceEEe-CCEEeCHHHHHHHHHhCCCcceEEEEeeecCCCCeEEEEEEEEcCCcccccccchHH
Confidence 9999999999999999999997 8999999999999999999999999997754 5788998864
Q ss_pred -hhHHHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccchh
Q 005991 593 -PDVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRSRC 642 (666)
Q Consensus 593 -~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~~~ 642 (666)
.++++++++++ |+ .|++|+.|.+++ +|++.+||++|+.|++...
T Consensus 558 ~~~~i~~~~~~~-L~-----~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~~ 603 (628)
T TIGR02316 558 VETGMMDCVVRQ-LG-----AVARPARVYFVAALPKTRSGKLLRRSIQALAE 603 (628)
T ss_pred HHHHHHHHHHHh-cC-----CCcCCCEEEEcCCCCCCCchHHHHHHHHHHHc
Confidence 24688999988 88 999999999995 8899999999999987643
No 20
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-70 Score=613.03 Aligned_cols=488 Identities=22% Similarity=0.283 Sum_probs=410.0
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
.++.++|+++++++||++|+++. + +.+||+||.++++++|++|.+.|+++||+|+++++|+++|+++++||
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~---~------~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~ 119 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDE---R------GTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAA 119 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEEC---C------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 48999999999999999999753 2 35999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHH
Q 005991 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQ 238 (666)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (666)
+++|++++|+++.++.+++.+++++++++++|++.+....+.......+.+..++....... .......++++
T Consensus 120 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 192 (549)
T PRK07788 120 GKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDE-------PSGSTDETLDD 192 (549)
T ss_pred HhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccc-------cCCcCcccHHH
Confidence 99999999999999999999999999999999998877766555444555554443322111 01123356777
Q ss_pred HHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHH
Q 005991 239 LQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVS 318 (666)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~ 318 (666)
+....... ..+..+++.++++|||||||.||||++||+++.+.+......+++.++|++++.+|++|.+++...+.+
T Consensus 193 ~~~~~~~~---~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~ 269 (549)
T PRK07788 193 LIAGSSTA---PLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLA 269 (549)
T ss_pred HhcCCCCC---CCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHH
Confidence 76543321 122346788999999999999999999999999888877777888899999999999999999888889
Q ss_pred HHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhh
Q 005991 319 VYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMW 397 (666)
Q Consensus 319 l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~ 397 (666)
+..|+++++.. +++..+++.++++++|++.++|+++..+++.......
T Consensus 270 l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~------------------------------- 318 (549)
T PRK07788 270 MALGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLA------------------------------- 318 (549)
T ss_pred HHhCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccC-------------------------------
Confidence 99999998876 7999999999999999999999999988753211000
Q ss_pred hHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC-CCCCCCccCCccCcEEEE
Q 005991 398 DRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPACEIKL 476 (666)
Q Consensus 398 d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~~v~i 476 (666)
....+++|.+++||+++++++.+++.+.+++.+++.||+||++..+...... ...++++|+|+++++++|
T Consensus 319 ---------~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i 389 (549)
T PRK07788 319 ---------KYDTSSLKIIFVSGSALSPELATRALEAFGPVLYNLYGSTEVAFATIATPEDLAEAPGTVGRPPKGVTVKI 389 (549)
T ss_pred ---------CCCCCceeEEEEeCCCCCHHHHHHHHHHhCccceeccCcchhchhhccChhhhhhcCCCcccCCCCcEEEE
Confidence 0001489999999999999999999998999999999999998655433221 245678999999999999
Q ss_pred EecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeee
Q 005991 477 VDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYV 556 (666)
Q Consensus 477 vd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v 556 (666)
+| +++..++.|. .|||+|+|+.++.||+++++. + . .+|||+|||+|++|+||+++|+||+||+||+ +|++|
T Consensus 390 ~d-~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~--~-~-~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~-~G~~v 460 (549)
T PRK07788 390 LD-ENGNEVPRGV---VGRIFVGNGFPFEGYTDGRDK--Q-I-IDGLLSSGDVGYFDEDGLLFVDGRDDDMIVS-GGENV 460 (549)
T ss_pred EC-CCcCCCCCCC---eEEEEEeCCCccccccCCCcc--c-c-cCCceecCceEEEcCCCCEEEeccCcceEEE-CCEEE
Confidence 99 5666666654 899999999999999998875 2 2 4799999999999999999999999999996 89999
Q ss_pred ccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcchhHHH-HHH
Q 005991 557 APEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIH 626 (666)
Q Consensus 557 ~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~ 626 (666)
+|.+||++|.+||+|.+|+|++.+++ +.++|+|+++ .++++++++++ ++ .|++|..+.+++ +|+
T Consensus 461 ~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~~~~~-l~-----~~~~P~~i~~v~~lP~ 534 (549)
T PRK07788 461 FPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLRAFVVKAPGAALDEDAIKDYVRDN-LA-----RYKVPRDVVFLDELPR 534 (549)
T ss_pred CHHHHHHHHHhCCCeeEEEEECCcCcccccEEEEEEEeCCCCCCCHHHHHHHHHHh-hh-----cCCCCcEEEEeCCCCC
Confidence 99999999999999999999987754 5789999863 47899999998 88 999999999985 888
Q ss_pred HHhhhhhhhhhccc
Q 005991 627 NLCQLYSSKELFRS 640 (666)
Q Consensus 627 ~~~gK~~r~~l~~~ 640 (666)
+.+||++|++|++.
T Consensus 535 t~~GKi~r~~L~~~ 548 (549)
T PRK07788 535 NPTGKVLKRELREM 548 (549)
T ss_pred CCCcCEeHHHhhcc
Confidence 88899999999763
No 21
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.5e-70 Score=621.85 Aligned_cols=506 Identities=19% Similarity=0.245 Sum_probs=412.9
Q ss_pred CCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH
Q 005991 76 PEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD 155 (666)
Q Consensus 76 ~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~ 155 (666)
...+..+++|+++++++||++|+++. +...++.+.+||+||.+++.++|++|+++|+++||+|+++++|++++++++
T Consensus 54 ~~~n~~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~ 130 (625)
T TIGR02188 54 GELNVSYNCVDRHLEARPDKVAIIWE---GDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAM 130 (625)
T ss_pred CEEEHHHHHHHHhhccCCCCeEEEEE---cCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 34567888998999999999999875 322344678999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEcccc---------HHHHHHhhhcCC-CceEEEEeCCCCCCCCCC
Q 005991 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT---------LNTLLSFISEIP-SVHLIVVVGGKDEHLPSL 225 (666)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~-~l~~ii~~~~~~~~~~~~ 225 (666)
|||+++|++++|+++.++++++.+++++++++++|+++.. ...+.+.....+ .++.++.++....... .
T Consensus 131 lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 209 (625)
T TIGR02188 131 LACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVP-W 209 (625)
T ss_pred HHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcC-c
Confidence 9999999999999999999999999999999999998653 233444444555 5666666654221110 0
Q ss_pred CCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHh-hcccccccCCCcEEEEcC
Q 005991 226 PSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVA-GFSLMVQFYPSDIYMSYL 304 (666)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~-~~~~~~~~~~~d~~l~~~ 304 (666)
. ......|+++...... ........++++++|+|||||||.||||+++|++++.... .....+++.++|++++.+
T Consensus 210 ~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 285 (625)
T TIGR02188 210 V---EGRDVWWHDLMAKASA-YCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTA 285 (625)
T ss_pred c---ccccccHHHHHhhcCC-CCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECC
Confidence 0 0112346666544322 1223346789999999999999999999999999765443 334446788999999999
Q ss_pred ChHHHHHHHH-HHHHHHhCcEEEEec-----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHH
Q 005991 305 PLAHIYERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTA 378 (666)
Q Consensus 305 pl~h~~~~~~-~~~~l~~G~~~~~~~-----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~ 378 (666)
|++|+.+... ++.+|..|+++++++ .++..+++.++++++|++.++|+++..|.+......
T Consensus 286 ~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~------------- 352 (625)
T TIGR02188 286 DVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWV------------- 352 (625)
T ss_pred CchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCccc-------------
Confidence 9999988755 678899999999986 378999999999999999999999988865311000
Q ss_pred HHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhC---CccccCcccchhhhhhhcc
Q 005991 379 AYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG---CQVMEGYGMTETSCIISAI 455 (666)
Q Consensus 379 ~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~---~~v~~~YG~TE~~~~~~~~ 455 (666)
+....+++|.+++||+++++++.+++.+.++ +++++.||+||+++.++..
T Consensus 353 ---------------------------~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~ 405 (625)
T TIGR02188 353 ---------------------------KKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITP 405 (625)
T ss_pred ---------------------------ccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeec
Confidence 0001148999999999999999999998875 7899999999998765543
Q ss_pred CCC--CCCCCCccCCccCcEEEEEecCCCCCCC-CCCCCCccEEEEeC--CCcCccccCChhhhhhccC--CCCeeeccc
Q 005991 456 DKG--DNLSGHVGSPNPACEIKLVDVPEMNYTS-EDQPHPRGEICVRG--PIVFQGYYKNEVQTREVID--GDGWLHTGD 528 (666)
Q Consensus 456 ~~~--~~~~~~vG~p~~~~~v~ivd~~~~~~~~-~~~~~~~GEl~v~g--~~v~~GY~~~~~~t~~~~~--~~gw~~TGD 528 (666)
.+. ...++++|+|++|++++|+| ++++.++ .+ +.|||+|+| |+++.|||++++.+.+.+. .+|||+|||
T Consensus 406 ~~~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~~g---~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD 481 (625)
T TIGR02188 406 LPGATPTKPGSATLPFFGIEPAVVD-EEGNPVEGPG---EGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGD 481 (625)
T ss_pred CCCCCCcCCCcccCCcCCceEEEEC-CCCCCCCCCC---CeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCc
Confidence 332 34678899999999999999 6666665 44 489999999 6899999999998888763 479999999
Q ss_pred EEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh---------hHH
Q 005991 529 IGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP---------DVL 596 (666)
Q Consensus 529 lg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~---------~~l 596 (666)
+|++|+||+++|+||+||+||+ +|++|+|.|||++|.+||.|.+|+|++.+++ +.++|+|++++ +++
T Consensus 482 l~~~d~dG~l~i~GR~dd~i~~-~G~ri~p~eIE~~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l 560 (625)
T TIGR02188 482 GARRDKDGYIWITGRVDDVINV-SGHRLGTAEIESALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLKDGYEPDDELRKEL 560 (625)
T ss_pred eEEEcCCCcEEEEecccCEEEe-CCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEeCCCCCCCHHHHHHH
Confidence 9999999999999999999997 8999999999999999999999999997654 67899998643 468
Q ss_pred HHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 597 KDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 597 ~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
+++++++ ++ .+++|+.|.+++ +|++.+||++|+.|++.
T Consensus 561 ~~~~~~~-l~-----~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~ 599 (625)
T TIGR02188 561 RKHVRKE-IG-----PIAKPDKIRFVPGLPKTRSGKIMRRLLRKI 599 (625)
T ss_pred HHHHHhh-cC-----CCccCcEEEECCCCCCCCCccchHHHHHHH
Confidence 8899988 88 899999998885 88888899999999887
No 22
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=3.5e-70 Score=617.59 Aligned_cols=513 Identities=22% Similarity=0.282 Sum_probs=414.3
Q ss_pred CCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005991 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (666)
Q Consensus 78 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA 157 (666)
..|++++|.+.++++||++|+.+... .+.....+++||+||.+++.++|++|+++|+++||+|+++++|+++|++++||
T Consensus 24 ~~t~~~~l~~~a~~~p~~~Al~~~~~-~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA 102 (632)
T PRK07529 24 PASTYELLSRAAARHPDAPALSFLLD-ADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWG 102 (632)
T ss_pred CCCHHHHHHHHHHHCCCCceEEeecc-cCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 46899999999999999999987411 11123456799999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEcccc-----HHHHHHhhhcCCCceEEEEeCCCCCCC--CCCC----
Q 005991 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT-----LNTLLSFISEIPSVHLIVVVGGKDEHL--PSLP---- 226 (666)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~l~~ii~~~~~~~~~--~~~~---- 226 (666)
|+++| +++|+++.++++++.+++++++++++|++... .+.+.......+.++.++.++...... +...
T Consensus 103 ~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 181 (632)
T PRK07529 103 GEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVPLI 181 (632)
T ss_pred HHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCccccccccccccccc
Confidence 99999 56999999999999999999999999997543 345555556677788877765432100 0000
Q ss_pred -CCCCcEEEehHHHHhcCCCCC-CCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcC
Q 005991 227 -STSGVKLISYLQLQSQGCSSP-QPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYL 304 (666)
Q Consensus 227 -~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~ 304 (666)
...+..+.+|.+.+....... .......++++++|+|||||||.||||++||+++++.+......+++.++|++++.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~ 261 (632)
T PRK07529 182 RRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGPGDTVFCGL 261 (632)
T ss_pred ccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCCCEEEEec
Confidence 001223456666655432211 112234679999999999999999999999999998887766677788999999999
Q ss_pred ChHHHHHHHH-HHHHHHhCcEEEEecC----C---HHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHH
Q 005991 305 PLAHIYERAN-QIVSVYYGVAVGFYQG----D---NLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLF 376 (666)
Q Consensus 305 pl~h~~~~~~-~~~~l~~G~~~~~~~~----~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~ 376 (666)
|++|.++... .+.++..|+++++.+. + ...+++.++++++|++.++|+++..|.+....
T Consensus 262 pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~------------- 328 (632)
T PRK07529 262 PLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVD------------- 328 (632)
T ss_pred CchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccc-------------
Confidence 9999999876 6788999999998751 2 36788999999999999999999988652100
Q ss_pred HHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccC
Q 005991 377 TAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAID 456 (666)
Q Consensus 377 ~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~ 456 (666)
....+++|.+++||+++++++.+++++.+|++++++||+||++++++...
T Consensus 329 ------------------------------~~~~~slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~ 378 (632)
T PRK07529 329 ------------------------------GHDISSLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNP 378 (632)
T ss_pred ------------------------------CCCccceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCC
Confidence 00014899999999999999999999989999999999999987766554
Q ss_pred CCC-CCCCCccCCccCcEEEEEecC-CCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEec
Q 005991 457 KGD-NLSGHVGSPNPACEIKLVDVP-EMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLP 534 (666)
Q Consensus 457 ~~~-~~~~~vG~p~~~~~v~ivd~~-~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~ 534 (666)
... ...+++|.|+|+++++|+..+ ++.+..+..+++.|||+|+|++++.||++++ .+.+.|..+|||+|||+|++|+
T Consensus 379 ~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~-~~~~~~~~~gw~~TGDlg~~d~ 457 (632)
T PRK07529 379 PDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAA-HNKGLWLEDGWLNTGDLGRIDA 457 (632)
T ss_pred ccccccCCCcccccCCceEEEEEcCCCCcccccCCCCCceEEEEECCCccccccCCc-cccccccCCCceEcCcEEEEcC
Confidence 432 467899999999999997533 3311122333458999999999999999865 4556666789999999999999
Q ss_pred CCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCC
Q 005991 535 GGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGI 605 (666)
Q Consensus 535 dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l 605 (666)
||+++|.||+||+||+ +|++|+|.+||++|.+||+|.+|+|++.++. +.++|+|++. ++++++|++++ +
T Consensus 458 dG~l~i~GR~~d~i~~-~G~~i~p~eIE~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~~~~~~~l~~~~~~~-l 535 (632)
T PRK07529 458 DGYFWLTGRAKDLIIR-GGHNIDPAAIEEALLRHPAVALAAAVGRPDAHAGELPVAYVQLKPGASATEAELLAFARDH-I 535 (632)
T ss_pred CceEEEEecccCEEEe-CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEcCCCCCCHHHHHHHHHHh-c
Confidence 9999999999999996 8999999999999999999999999997754 5789999853 57899999998 6
Q ss_pred CcccccccccCcchhHHH-HHHHHhhhhhhhhhccchh
Q 005991 606 KVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRSRC 642 (666)
Q Consensus 606 ~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~~~ 642 (666)
+ ..+++|+.|.+++ +|++.+||++|++|++...
T Consensus 536 ~----~~~~~P~~i~~v~~lP~t~~GKi~r~~Lr~~~~ 569 (632)
T PRK07529 536 A----ERAAVPKHVRILDALPKTAVGKIFKPALRRDAI 569 (632)
T ss_pred c----hhccCCcEEEEecCCCCCCCCcccHHHHHHHHH
Confidence 4 1478999999995 8888889999999998833
No 23
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-71 Score=538.77 Aligned_cols=490 Identities=21% Similarity=0.279 Sum_probs=426.5
Q ss_pred CCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005991 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (666)
Q Consensus 78 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA 157 (666)
..++.+++.++|+++||++|+++. + +.+||+||+++++++|.+|+++|+++||+|.+.+||..++++++||
T Consensus 27 d~~l~d~L~~~A~~~pdriAv~d~-----~----~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FA 97 (542)
T COG1021 27 DRTLTDILTDHAARYPDRIAVIDG-----E----RRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFA 97 (542)
T ss_pred CCcHHHHHHHHHhhcCCceEEecC-----c----ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHH
Confidence 478999999999999999999743 2 3499999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccc-----cHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcE
Q 005991 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQ-----TLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVK 232 (666)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~-----~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~ 232 (666)
++++|+.+|.--|.....+|.+....++++.+|++.. ..+.+.+...+.+.++++++.++.+..
T Consensus 98 LlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~----------- 166 (542)
T COG1021 98 LLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHP----------- 166 (542)
T ss_pred HHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCc-----------
Confidence 9999999999889999999999999999999998864 345666777888999999988654311
Q ss_pred EEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHH
Q 005991 233 LISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYER 312 (666)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~ 312 (666)
...+..+........+..+.++++++++..+.||||.||-+..||.....+++...+..++++.+++++.+|..|.|-+
T Consensus 167 -~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfpl 245 (542)
T COG1021 167 -SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPL 245 (542)
T ss_pred -chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCC
Confidence 1122222222233345567788999999999999999999999999999988888888999999999999999999988
Q ss_pred HH--HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHc
Q 005991 313 AN--QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVS 389 (666)
Q Consensus 313 ~~--~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~ 389 (666)
.. .+..++.|+++|+.+ .++......|+++++|+...||.+...|++......
T Consensus 246 ssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~------------------------ 301 (542)
T COG1021 246 SSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWER------------------------ 301 (542)
T ss_pred CCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhccc------------------------
Confidence 86 788999999999987 899999999999999999999999988877533211
Q ss_pred CCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCC-CCCCCCCccCC
Q 005991 390 GQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDK-GDNLSGHVGSP 468 (666)
Q Consensus 390 ~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p 468 (666)
...+|||.+-+||+.+++++.+++...+||.+.+.|||.|.-...+-... .+.-..+-|+|
T Consensus 302 ------------------~~LsSLrllQVGGarl~~~~Arrv~~~lgC~LQQVFGMAEGLvnyTRLDDp~E~i~~TQGrP 363 (542)
T COG1021 302 ------------------ADLSSLRLLQVGGARLSATLARRVPAVLGCQLQQVFGMAEGLVNYTRLDDPPEIIIHTQGRP 363 (542)
T ss_pred ------------------CCchheeEEeecCcccCHHHHhhchhhhCchHHHHhhhhhhhhcccccCCchHheeecCCCc
Confidence 11159999999999999999999999999999999999996543332221 12334578999
Q ss_pred c-cCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCe
Q 005991 469 N-PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNI 547 (666)
Q Consensus 469 ~-~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ 547 (666)
+ |.-|++|+| ++++++++|+ +|+|..|||..++|||+.|+.++.+|+.+|||+|||++++|+||+|.+.||.||+
T Consensus 364 lsP~DEvrvvD-~dg~pv~pGE---~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQ 439 (542)
T COG1021 364 LSPDDEVRVVD-ADGNPVAPGE---VGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQ 439 (542)
T ss_pred CCCcceeEEec-CCCCCCCCCC---cceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEecCCceEEEEeeehhh
Confidence 7 789999999 6778777775 9999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh-----hHHHHHHHHcCCCcccccccccCcch
Q 005991 548 FKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP-----DVLKDWAASQGIKVIYCFSFRANSHV 619 (666)
Q Consensus 548 ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~-----~~l~~~~~~~~l~~~~~~~~~~p~~i 619 (666)
|+ ++||+|..+|||+.|..||.|.+|++++.+|+ ++.+|+|++.+ .+++.++++.|+. .|++|+.|
T Consensus 440 IN-RgGEKIAAeEvEn~LL~HP~V~~AAlVampDelLGEksCAfiv~~~~~~~~~qlr~~L~~~GlA-----a~K~PDri 513 (542)
T COG1021 440 IN-RGGEKIAAEEVENLLLRHPAVHDAALVAMPDELLGEKSCAFIVVKEPPLRAAQLRRFLRERGLA-----AFKLPDRI 513 (542)
T ss_pred hc-cccchhhHHHHHHHHhhCchhhhhhhhcCchhhcCcceeEEEEecCCCCCHHHHHHHHHHcchh-----hhcCCcce
Confidence 99 79999999999999999999999999998875 78999998743 6899999999998 99999999
Q ss_pred hHHH-HHHHHhhhhhhhhhccc
Q 005991 620 IFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 620 ~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
.+++ +|.+..||||||.|+|.
T Consensus 514 e~v~~~P~T~VGKIdKk~Lr~~ 535 (542)
T COG1021 514 EFVDSLPLTAVGKIDKKALRRR 535 (542)
T ss_pred eecccCCCcccccccHHHHHHH
Confidence 9996 88888899999999965
No 24
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-69 Score=615.13 Aligned_cols=521 Identities=18% Similarity=0.243 Sum_probs=416.2
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
..+..+++|.++++++||++|+++. +...+..+.+||+||+++++++|++|.++|+++||+|+++++|+++++++++
T Consensus 65 ~~n~~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~l 141 (637)
T PRK00174 65 ELNVSYNCLDRHLKTRGDKVAIIWE---GDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAML 141 (637)
T ss_pred EeEHHHHHHHHhhccCCCCeEEEEE---CCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3445678888899999999999875 2222345779999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEcccc---------HHHHHHhhhcCCCceEEEEeCCCCCCCCCCCC
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT---------LNTLLSFISEIPSVHLIVVVGGKDEHLPSLPS 227 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~ 227 (666)
||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+.+....++.++.++.++....... .
T Consensus 142 A~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 218 (637)
T PRK00174 142 ACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVD-W-- 218 (637)
T ss_pred HHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcC-c--
Confidence 999999999999999999999999999999999997653 2334444445566777776654321110 0
Q ss_pred CCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHh-hcccccccCCCcEEEEcCCh
Q 005991 228 TSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVA-GFSLMVQFYPSDIYMSYLPL 306 (666)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~-~~~~~~~~~~~d~~l~~~pl 306 (666)
.......|+++...... ..+.....++++++|+|||||||.||||+++|++++..+. .....+++.++|++++.+|+
T Consensus 219 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 296 (637)
T PRK00174 219 -VEGRDLWWHELVAGASD-ECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADV 296 (637)
T ss_pred -CCCCcccHHHHHhhcCC-CCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCc
Confidence 01112356666543221 1223345679999999999999999999999999875443 33344678889999999999
Q ss_pred HHHHHHHH-HHHHHHhCcEEEEec-----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Q 005991 307 AHIYERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAY 380 (666)
Q Consensus 307 ~h~~~~~~-~~~~l~~G~~~~~~~-----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 380 (666)
+|..+... ++.+|+.|+++++++ .++..+++.|+++++|++.++|+++..|.+......
T Consensus 297 ~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~--------------- 361 (637)
T PRK00174 297 GWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHP--------------- 361 (637)
T ss_pred hHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCccc---------------
Confidence 99998765 678899999999875 378999999999999999999999988865311000
Q ss_pred HHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhC---CccccCcccchhhhhhhccCC
Q 005991 381 NSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG---CQVMEGYGMTETSCIISAIDK 457 (666)
Q Consensus 381 ~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~---~~v~~~YG~TE~~~~~~~~~~ 457 (666)
.....++||.+++||+++++++.+++.+.++ +++++.||+||+++.++...+
T Consensus 362 -------------------------~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~ 416 (637)
T PRK00174 362 -------------------------KKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLP 416 (637)
T ss_pred -------------------------ccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCC
Confidence 0000148999999999999999999988776 789999999999876554332
Q ss_pred C--CCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeC--CCcCccccCChhhhhhcc--CCCCeeecccEEE
Q 005991 458 G--DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRG--PIVFQGYYKNEVQTREVI--DGDGWLHTGDIGL 531 (666)
Q Consensus 458 ~--~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g--~~v~~GY~~~~~~t~~~~--~~~gw~~TGDlg~ 531 (666)
. ....+++|+|++|++++|+| ++++.++.+. .|||+|+| |++++|||++++.+.+.+ ..+|||+|||+|+
T Consensus 417 ~~~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g~---~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~ 492 (637)
T PRK00174 417 GATPLKPGSATRPLPGIQPAVVD-EEGNPLEGGE---GGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGAR 492 (637)
T ss_pred CCCCcCCCcccCCCCCceEEEEC-CCCCCCCCCC---cEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEE
Confidence 2 24567899999999999999 5666666554 89999999 699999999999888776 3579999999999
Q ss_pred EecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC---------hhHHHHH
Q 005991 532 WLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD---------PDVLKDW 599 (666)
Q Consensus 532 ~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~---------~~~l~~~ 599 (666)
+|+||+++|+||+||+||+ +|++|+|.|||++|.+||+|.+|+|++.++. +.++|+|++. .++++++
T Consensus 493 ~d~dG~l~~~GR~dd~ik~-~G~~v~p~eIE~~l~~~~~V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~ 571 (637)
T PRK00174 493 RDEDGYYWITGRVDDVLNV-SGHRLGTAEIESALVAHPKVAEAAVVGRPDDIKGQGIYAFVTLKGGEEPSDELRKELRNW 571 (637)
T ss_pred EcCCCcEEEEEecccEEEe-CCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHH
Confidence 9999999999999999997 7999999999999999999999999997654 6799999864 2578889
Q ss_pred HHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccchhhh-hcCCCccceehh
Q 005991 600 AASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRSRCCY-RTGRDSSVFCQE 656 (666)
Q Consensus 600 ~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~~~~~-~~~~~~~~~~~~ 656 (666)
++++ ++ .+++|..|.+++ +|++.+||++|++|++..... ..+..+++-.++
T Consensus 572 l~~~-l~-----~~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~~~~~~~~~~~~~~ 624 (637)
T PRK00174 572 VRKE-IG-----PIAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGEEILGDTSTLADPS 624 (637)
T ss_pred HHhh-cC-----CccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCCCCCCCcccccCHH
Confidence 9888 88 999999999995 888888999999998873322 234444443333
No 25
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=1.2e-69 Score=611.99 Aligned_cols=503 Identities=22% Similarity=0.316 Sum_probs=392.4
Q ss_pred CCCCCCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhH
Q 005991 72 FPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEW 151 (666)
Q Consensus 72 ~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~ 151 (666)
++......|+.++|.++++++||++|+.+. +. .++++++||+||.++++++|++|.+.|+++||+|+++++|+++|
T Consensus 32 ~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~---~~-~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~ 107 (614)
T PRK08180 32 EPLGDYPRRLTDRLVHWAQEAPDRVFLAER---GA-DGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEH 107 (614)
T ss_pred CCCCCcCccHHHHHHHHHHHCCCCceeeec---cC-CCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH
Confidence 333445679999999999999999999764 21 23467899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCeEEecCCCCC-----HHHHHHHHHhcCceEEEEcccc--HHHHHHhhhcCCCceEEEEeCCCCCCCCC
Q 005991 152 LIVDHACSAYSYISVPLYDTLG-----PDAVKYVVNHAEIEAIFCIPQT--LNTLLSFISEIPSVHLIVVVGGKDEHLPS 224 (666)
Q Consensus 152 ~~~~lA~~~~G~~~vpl~~~~~-----~~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~~~l~~ii~~~~~~~~~~~ 224 (666)
+++++||+++|+++||+++.++ .+++.+++++++++++|++... ...+.... . ...+ ++..+....
T Consensus 108 ~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~-~-~~~~-~i~~~~~~~---- 180 (614)
T PRK08180 108 ALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVV-P-ADVE-VVAVRGAVP---- 180 (614)
T ss_pred HHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhc-c-CCce-EEEecCCCC----
Confidence 9999999999999999999998 7999999999999999997542 22221111 1 1222 333222100
Q ss_pred CCCCCCcEEEehHHHHhcCCCCC--CCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccC--CCcEE
Q 005991 225 LPSTSGVKLISYLQLQSQGCSSP--QPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFY--PSDIY 300 (666)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~--~~d~~ 300 (666)
.....+|+++........ .......++|+++|+|||||||.||||++||+++.+.+......+++. .++++
T Consensus 181 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~ 255 (614)
T PRK08180 181 -----GRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVL 255 (614)
T ss_pred -----CcccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEE
Confidence 001245666654321111 111234679999999999999999999999999998887766655553 56899
Q ss_pred EEcCChHHHHHHHH-HHHHHHhCcEEEEec--CC---HHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHH
Q 005991 301 MSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GD---NLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREK 374 (666)
Q Consensus 301 l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~ 374 (666)
++++|++|.+++.. ++.+++.|+++++.+ ++ ...+++.++++++|+++++|++|..|++......
T Consensus 256 l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~--------- 326 (614)
T PRK08180 256 VDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDA--------- 326 (614)
T ss_pred EEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhch---------
Confidence 99999999999865 567899999999875 23 3578889999999999999999999876432110
Q ss_pred HHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHH----hC--CccccCcccchh
Q 005991 375 LFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVC----FG--CQVMEGYGMTET 448 (666)
Q Consensus 375 l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~----~~--~~v~~~YG~TE~ 448 (666)
.......+++|.+++||+++++++.+++++. +| +++++.||+||+
T Consensus 327 -----------------------------~~~~~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~ 377 (614)
T PRK08180 327 -----------------------------ALRRRFFSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTET 377 (614)
T ss_pred -----------------------------hhhhhhccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeeccccc
Confidence 0111122589999999999999999998874 33 679999999999
Q ss_pred hhhhhccCCCCCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeeccc
Q 005991 449 SCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGD 528 (666)
Q Consensus 449 ~~~~~~~~~~~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGD 528 (666)
+.+++.........+++|+|+||++++|+|. + ..|||+|+|++++.|||++|+.|++.|+.||||+|||
T Consensus 378 ~~~~~~~~~~~~~~~svG~p~pg~~v~i~d~--------~---~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGD 446 (614)
T PRK08180 378 APSATFTTGPLSRAGNIGLPAPGCEVKLVPV--------G---GKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGD 446 (614)
T ss_pred CCceEecccccCCCCcccCccCCcEEEEecC--------C---CCcEEEEecCccchhhcCChhHhHhhcccCCceeccc
Confidence 8766655444566789999999999999982 1 2699999999999999999999999998899999999
Q ss_pred EEEE----ecCCcEEEEccCCCeEEcCCeeeec--cHHHHHHHhcCcCcceEEEEEeCCCCeEEEEEEcChh--------
Q 005991 529 IGLW----LPGGRLKIIDRKKNIFKLAQGEYVA--PEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPD-------- 594 (666)
Q Consensus 529 lg~~----~~dG~l~i~GR~~d~ikl~~G~~v~--p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~-------- 594 (666)
+|++ |++|+|+|+||+||+||+++|++|+ |.|||.++.+||.|.+|+|+|.++ +.+.|+|+++++
T Consensus 447 lg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~~-~~~~a~V~~~~~~~~~~~~~ 525 (614)
T PRK08180 447 AVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQDVVITGHDR-DEIGLLVFPNLDACRRLAGL 525 (614)
T ss_pred eEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhheEEEEcCCC-CceEEEEEcCHHHHHHHHhh
Confidence 9999 5689999999999999988899777 778899999999999999999984 578899998654
Q ss_pred -------------HHHHHHHHcCCCccc---ccccccCcchhHHH-HHHHHhhhhhhh-hhccch
Q 005991 595 -------------VLKDWAASQGIKVIY---CFSFRANSHVIFIA-LIHNLCQLYSSK-ELFRSR 641 (666)
Q Consensus 595 -------------~l~~~~~~~~l~~~~---~~~~~~p~~i~~v~-~~~~~~gK~~r~-~l~~~~ 641 (666)
+++++++++ |.... ...+..|+++.+++ +|.+.+||+..+ +++|.+
T Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~-l~~~~~~~~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~ 589 (614)
T PRK08180 526 LADASLAEVLAHPAVRAAFRER-LARLNAQATGSSTRVARALLLDEPPSLDAGEITDKGYINQRA 589 (614)
T ss_pred cccCCHHHHhcCHHHHHHHHHH-HHHHHhhccccHhheeEEEEecCCCCCccCccCccccccHHH
Confidence 366777766 65111 11223899999986 566656877766 555553
No 26
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=2.5e-69 Score=663.37 Aligned_cols=549 Identities=15% Similarity=0.162 Sum_probs=424.5
Q ss_pred hHHHhhHHHHhhccccCCcCCCccccCCCCccccccCCCceEEcCCCCCCCcCccccCCCCCCcccccCCCCCCCCCHHH
Q 005991 4 SSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHD 83 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~ 83 (666)
..++++|..+|++++++|+.++++++|..+..... ++.... ... ++ ....++++
T Consensus 187 ~~l~~~f~~lL~~~~~~p~~~l~~l~~~~~~~~~~--------~~~~~~------------~~~----~~--~~~~~l~~ 240 (1389)
T TIGR03443 187 TIVADQLAQLLSAASSNPDEPIGKVSLITPSQKSL--------LPDPTK------------DLD----WS--GFRGAIHD 240 (1389)
T ss_pred HHHHHHHHHHHHHHHhCcCCceecccCCCHHHHhh--------hhcccc------------ccC----cC--cccCcHHH
Confidence 46788999999999999999999998765442100 000000 000 00 11368999
Q ss_pred HHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCC
Q 005991 84 NFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSY 163 (666)
Q Consensus 84 ~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~ 163 (666)
+|+++++++||++|+++...........+.+||+||.++++++|++|.+.|+++|++|+|+++|+++|+++++||+++|+
T Consensus 241 ~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~l~~G~ 320 (1389)
T TIGR03443 241 IFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGVLKAGA 320 (1389)
T ss_pred HHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHHHhhCc
Confidence 99999999999999986411000012346799999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHHhcCceEEEEcccc---HHHHHHhhhc----CCCceEEEEeCCCCCCCCCCCCCCCcEEEeh
Q 005991 164 ISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT---LNTLLSFISE----IPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (666)
Q Consensus 164 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---~~~~~~~~~~----~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (666)
+++|++|.++.+++.++++++++++++++... ...+...... ...+..+...+... ... .... ...
T Consensus 321 ~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~-~~~ 393 (1389)
T TIGR03443 321 TFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGS--LVG----GSLE-GGE 393 (1389)
T ss_pred EEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEeccccc--ccc----cccc-ccc
Confidence 99999999999999999999999999987542 1111111110 01111111111100 000 0000 000
Q ss_pred HHHHhcCC--CCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHH
Q 005991 237 LQLQSQGC--SSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN 314 (666)
Q Consensus 237 ~~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~ 314 (666)
.+...... ..........++++++|+|||||||.||||+++|+++.+.+.+....+++.++|++++++|++|+.++..
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~~ 473 (1389)
T TIGR03443 394 TDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTMLSGIAHDPIQRD 473 (1389)
T ss_pred ccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEecCceecchHHH
Confidence 00000000 0001112346899999999999999999999999999999888888888999999999999999999988
Q ss_pred HHHHHHhCcEEEEec----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcC
Q 005991 315 QIVSVYYGVAVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSG 390 (666)
Q Consensus 315 ~~~~l~~G~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~ 390 (666)
++.+|+.|+++++.+ .++..+++.|+++++|++.++|+++..|......
T Consensus 474 i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~--------------------------- 526 (1389)
T TIGR03443 474 MFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQATT--------------------------- 526 (1389)
T ss_pred HHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcccc---------------------------
Confidence 999999999999876 3688999999999999999999999877531000
Q ss_pred CCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCCCC----------
Q 005991 391 QTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGD---------- 459 (666)
Q Consensus 391 ~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~---------- 459 (666)
...++|.+++||+++++...+.+.... +++++|+||+||++..++......
T Consensus 527 ------------------~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~ 588 (1389)
T TIGR03443 527 ------------------PIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKN 588 (1389)
T ss_pred ------------------cCCCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhc
Confidence 014799999999999999999888765 789999999999987665432211
Q ss_pred -CCCCCccCCccCcEEEEEecCC-CCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccC------------------
Q 005991 460 -NLSGHVGSPNPACEIKLVDVPE-MNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVID------------------ 519 (666)
Q Consensus 460 -~~~~~vG~p~~~~~v~ivd~~~-~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~------------------ 519 (666)
....++|+|+++++++|+|.++ ...++.|. .|||||+|+++++||+++|+.|+++|.
T Consensus 589 ~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~---~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~ 665 (1389)
T TIGR03443 589 LKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGE---VGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENN 665 (1389)
T ss_pred ccCcCcCCCccCCCEEEEECCccCCCcCCCCC---ceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccc
Confidence 1245799999999999999543 34455554 899999999999999999999999883
Q ss_pred ----------CCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCC---CCeEE
Q 005991 520 ----------GDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLV 586 (666)
Q Consensus 520 ----------~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~v 586 (666)
.++||+|||+|++++||.|+|+||+||+||+ +|+||+|.|||++|.+||.|.+++|++.++ .+.++
T Consensus 666 ~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki-~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lv 744 (1389)
T TIGR03443 666 KPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKI-RGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLV 744 (1389)
T ss_pred cccccccCCCccceeecCCceeEcCCCCEEEecccCCEEEe-CcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEE
Confidence 3689999999999999999999999999997 899999999999999999999999987543 35799
Q ss_pred EEEEcC--------------------------------hhHHHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhh
Q 005991 587 AIVAVD--------------------------------PDVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYS 633 (666)
Q Consensus 587 a~vv~~--------------------------------~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~ 633 (666)
|+|+++ .++++++++++ |+ .|++|..+++++ +|++.+||++
T Consensus 745 a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Lp-----~y~~P~~~~~~~~lP~t~~GKid 818 (1389)
T TIGR03443 745 SYIVPQDKSDELEEFKSEVDDEESSDPVVKGLIKYRKLIKDIREYLKKK-LP-----SYAIPTVIVPLKKLPLNPNGKVD 818 (1389)
T ss_pred EEEeccCccccccccccccccccccccchhhhhhhhhhHHHHHHHHHhh-CC-----cccCCceEEEcccCCCCCCcccc
Confidence 999875 13577888887 88 999999998885 8888899999
Q ss_pred hhhhccc
Q 005991 634 SKELFRS 640 (666)
Q Consensus 634 r~~l~~~ 640 (666)
|++|++.
T Consensus 819 r~~L~~~ 825 (1389)
T TIGR03443 819 KPALPFP 825 (1389)
T ss_pred HhhcCCC
Confidence 9999865
No 27
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.5e-69 Score=601.25 Aligned_cols=497 Identities=20% Similarity=0.268 Sum_probs=413.1
Q ss_pred CCCCHHHHHHHHHH-hCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH
Q 005991 77 EIGTLHDNFIYAVE-NYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD 155 (666)
Q Consensus 77 ~~~tl~~~~~~~a~-~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~ 155 (666)
..+.+++++.++++ .+|+++|+.+. +.. ..+.+||+||.++++++|++|.++|+++||+|+++++|+++|++++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~a~~~~---~~~--~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 115 (570)
T PRK04319 41 KVNIAYEAIDRHADGGRKDKVALRYL---DAS--RKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFAL 115 (570)
T ss_pred ceeHHHHHHHHhhccCCCCceEEEEE---CCC--CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHH
Confidence 45667789988887 57999999875 322 3467999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEe
Q 005991 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLIS 235 (666)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (666)
+||+++|++++|+++.++++++.+++++++++++|++......... ..++.++.++.+++.... .....+
T Consensus 116 la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--------~~~~~~ 185 (570)
T PRK04319 116 LGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--DDLPSLKHVLLVGEDVEE--------GPGTLD 185 (570)
T ss_pred HHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--hcCCCceEEEEECCCcCC--------CcCccC
Confidence 9999999999999999999999999999999999998765443321 245666677766543210 112245
Q ss_pred hHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHH-
Q 005991 236 YLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN- 314 (666)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~- 314 (666)
+.++...... ..+.....++++++|+|||||||.||||+++|+++++.+......+++.++|++++..|++|.++...
T Consensus 186 ~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~ 264 (570)
T PRK04319 186 FNALMEQASD-EFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYG 264 (570)
T ss_pred HHHHHhhcCC-cCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHH
Confidence 6665544322 12233456789999999999999999999999999988877777788899999999999999988665
Q ss_pred HHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCC
Q 005991 315 QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT 392 (666)
Q Consensus 315 ~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~ 392 (666)
++.++..|+++++.. +++..+++.|+++++|++.++|++++.|........
T Consensus 265 ~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--------------------------- 317 (570)
T PRK04319 265 IFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLV--------------------------- 317 (570)
T ss_pred HHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCccc---------------------------
Confidence 678999999999875 789999999999999999999999998865210000
Q ss_pred CChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC-CCCCCCccCCccC
Q 005991 393 PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPA 471 (666)
Q Consensus 393 ~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~ 471 (666)
. ....+++|.+++||+++++++.+++++.+|.++++.||+||++..++..... ...++++|+|+|+
T Consensus 318 -----~--------~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~g 384 (570)
T PRK04319 318 -----K--------KYDLSSLRHILSVGEPLNPEVVRWGMKVFGLPIHDNWWMTETGGIMIANYPAMDIKPGSMGKPLPG 384 (570)
T ss_pred -----c--------cCCcccceEEEEcccCCCHHHHHHHHHHhCCCeEeceeecccCCEEEecCCCCCCCCCcCcCCCCC
Confidence 0 0001489999999999999999999998999999999999998765443332 3457899999999
Q ss_pred cEEEEEecCCCCCCCCCCCCCccEEEEeC--CCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEE
Q 005991 472 CEIKLVDVPEMNYTSEDQPHPRGEICVRG--PIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (666)
Q Consensus 472 ~~v~ivd~~~~~~~~~~~~~~~GEl~v~g--~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ik 549 (666)
++++|+| +++..++.| +.|||+++| ++++.|||++++.|++.| .+|||+|||+|+++++|+++++||+||+||
T Consensus 385 ~~~~i~d-~~~~~~~~g---~~Gel~i~~~~~~~~~GY~~~~~~~~~~~-~~gw~~TGDl~~~~~~g~l~~~GR~~d~i~ 459 (570)
T PRK04319 385 IEAAIVD-DQGNELPPN---RMGNLAIKKGWPSMMRGIWNNPEKYESYF-AGDWYVSGDSAYMDEDGYFWFQGRVDDVIK 459 (570)
T ss_pred CEEEEEC-CCCCCCCCC---CceEEEEcCCCChHHhHhcCCHHHhhhhh-cCCceEeCcEEEECCCeeEEEEecCCCEEE
Confidence 9999999 455555444 489999997 899999999999999999 489999999999999999999999999999
Q ss_pred cCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh---------hHHHHHHHHcCCCcccccccccCc
Q 005991 550 LAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP---------DVLKDWAASQGIKVIYCFSFRANS 617 (666)
Q Consensus 550 l~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~---------~~l~~~~~~~~l~~~~~~~~~~p~ 617 (666)
+ +|++|+|.|||+++.+||.|.+++|++.+++ +.++|+|++.+ ++++++++++ ++ .|++|+
T Consensus 460 ~-~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~~~~~-l~-----~~~~P~ 532 (570)
T PRK04319 460 T-SGERVGPFEVESKLMEHPAVAEAGVIGKPDPVRGEIIKAFVALRPGYEPSEELKEEIRGFVKKG-LG-----AHAAPR 532 (570)
T ss_pred E-CCEEECHHHHHHHHhhCCCeeecceecccCcCCceEEEEEEEECCCCCCCHHHHHHHHHHHHHh-cc-----cccCCc
Confidence 7 8999999999999999999999999997754 67888888642 4688899988 88 999999
Q ss_pred chhHHH-HHHHHhhhhhhhhhccch
Q 005991 618 HVIFIA-LIHNLCQLYSSKELFRSR 641 (666)
Q Consensus 618 ~i~~v~-~~~~~~gK~~r~~l~~~~ 641 (666)
.+.+++ +|++.+||++|++|++..
T Consensus 533 ~i~~v~~iP~t~~GKv~r~~L~~~~ 557 (570)
T PRK04319 533 EIEFKDKLPKTRSGKIMRRVLKAWE 557 (570)
T ss_pred EEEEeCCCCCCCchhhhHHHHHHHH
Confidence 999995 888888999999998763
No 28
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=2.5e-68 Score=594.72 Aligned_cols=492 Identities=21% Similarity=0.297 Sum_probs=410.0
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
.++.++|.+.++.+|+++|+++. +...++++.+||+||.++++++|++|.+.|+++|++|+++++|+++|+++++||
T Consensus 24 ~~l~~~l~~~a~~~p~~~A~~~~---~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~ 100 (547)
T PRK13295 24 RTINDDLDACVASCPDKTAVTAV---RLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLAC 100 (547)
T ss_pred CCHHHHHHHHHHHCCCceEEEec---CCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHH
Confidence 58999999999999999999875 322234578999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEcccc-----HHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEE
Q 005991 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT-----LNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKL 233 (666)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~ 233 (666)
+++|++++|+++.++.+++.++++.+++++++++... .+.+.+....++.++.++.++... .
T Consensus 101 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~ 167 (547)
T PRK13295 101 SRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDG-------------A 167 (547)
T ss_pred HhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCC-------------c
Confidence 9999999999999999999999999999999998753 233444444556666676654321 0
Q ss_pred EehHHHHhcCC-----C--CCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCCh
Q 005991 234 ISYLQLQSQGC-----S--SPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPL 306 (666)
Q Consensus 234 ~~~~~~~~~~~-----~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl 306 (666)
.++.++..... . .........++++++|+|||||||.||||+++|+++...+......+++.++|++++.+|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~ 247 (547)
T PRK13295 168 DSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASPM 247 (547)
T ss_pred cCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEecCc
Confidence 12333322110 0 0111223467899999999999999999999999999888877777888999999999999
Q ss_pred HHHHHHHH-HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 005991 307 AHIYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKK 384 (666)
Q Consensus 307 ~h~~~~~~-~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~ 384 (666)
+|.+++.. ++.++..|+++++.+ .++..+++.++++++|++.++|.++..+........
T Consensus 248 ~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~------------------- 308 (547)
T PRK13295 248 AHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESG------------------- 308 (547)
T ss_pred hhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccC-------------------
Confidence 99998766 677899999999887 699999999999999999999999988765211000
Q ss_pred HHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC--CCCC
Q 005991 385 QAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG--DNLS 462 (666)
Q Consensus 385 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~--~~~~ 462 (666)
...+++|.+++||+++++++.+++++.+++++++.||+||++.+++..... ....
T Consensus 309 -----------------------~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~ 365 (547)
T PRK13295 309 -----------------------RPVSSLRTFLCAGAPIPGALVERARAALGAKIVSAWGMTENGAVTLTKLDDPDERAS 365 (547)
T ss_pred -----------------------CCcccceEEEEecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeeccCCCcchhcc
Confidence 001479999999999999999999988999999999999998765443322 1335
Q ss_pred CCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEc
Q 005991 463 GHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIID 542 (666)
Q Consensus 463 ~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~G 542 (666)
.++|+|+++++++|+| ++++.++.++ .|||+|+|++++.||+++|+.|++. .+|||+|||+|+++++|++++.|
T Consensus 366 ~~~G~~~~~~~v~i~d-~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~t~~~--~~g~~~TGD~~~~~~~g~l~~~g 439 (547)
T PRK13295 366 TTDGCPLPGVEVRVVD-ADGAPLPAGQ---IGRLQVRGCSNFGGYLKRPQLNGTD--ADGWFDTGDLARIDADGYIRISG 439 (547)
T ss_pred CccccccCCcEEEEEC-CCCCCCCCCC---CCeEEEEcCcccccccCCccccccC--CCCCeecceEEEEcCCceEEEEe
Confidence 6899999999999999 5566666655 8999999999999999999999876 57899999999999999999999
Q ss_pred cCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCccccccc
Q 005991 543 RKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSF 613 (666)
Q Consensus 543 R~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~ 613 (666)
|.||+||+ +|++|+|.+||++|.++++|.+++|++.++. +.++++|+++ .+++.+++++..++ .+
T Consensus 440 R~~~~i~~-~G~~v~p~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~~l~-----~~ 513 (547)
T PRK13295 440 RSKDVIIR-GGENIPVVEIEALLYRHPAIAQVAIVAYPDERLGERACAFVVPRPGQSLDFEEMVEFLKAQKVA-----KQ 513 (547)
T ss_pred ccCCeEEE-CCEEECHHHHHHHHHhCCCeeeEEEEeeecCCCCcEEEEEEEeCCCCCCCHHHHHHHHHhccCc-----cc
Confidence 99999997 8999999999999999999999999997644 5789999864 36788888874487 89
Q ss_pred ccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 614 RANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 614 ~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
++|..+.+++ +|++.+||++|++|++.
T Consensus 514 ~~P~~i~~v~~lP~t~sgK~~r~~L~~~ 541 (547)
T PRK13295 514 YIPERLVVRDALPRTPSGKIQKFRLREM 541 (547)
T ss_pred cCCcEEEEeccCCCCCCccccHHHHHHH
Confidence 9999999995 88888899999999764
No 29
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.5e-69 Score=707.13 Aligned_cols=522 Identities=17% Similarity=0.221 Sum_probs=434.4
Q ss_pred hHHHhhHHHHhhccccCCcCCCccccCCCCccccccCCCceEEcCCCCCCCcCccccCCCCCCcccccCCCCCCCCCHHH
Q 005991 4 SSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHD 83 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~ 83 (666)
..++++|.++|++++++|+.+++++++..+.... .+...+.. ...+.+...++++
T Consensus 3045 ~~~~~~~~~~l~~~~~~p~~~~~~l~~l~~~~~~-------------------~~~~~~~~------~~~~~~~~~~~~~ 3099 (3956)
T PRK12467 3045 ERLAESFDRLLQAMLNNPAARLGELPTLAAHERR-------------------QVLHAWNA------TAAAYPSERLVHQ 3099 (3956)
T ss_pred HHHHHHHHHHHHHHHhCcCCchhhccCCCHHHHH-------------------HHHHhhcc------CCCCCCccccHHH
Confidence 5688999999999999999999999987654210 00000100 0111234479999
Q ss_pred HHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCC
Q 005991 84 NFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSY 163 (666)
Q Consensus 84 ~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~ 163 (666)
+|+++++++||++|+++. +. .+||+||+++++++|+.|.+.|+++|++|+|+++|++++++++|||+++|+
T Consensus 3100 l~~~~a~~~p~~~Av~~~---~~------~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa 3170 (3956)
T PRK12467 3100 LIEAQVARTPEAPALVFG---DQ------QLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGG 3170 (3956)
T ss_pred HHHHHHHhCCCcceEeeC---Cc------ccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCc
Confidence 999999999999999875 33 499999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcC
Q 005991 164 ISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQG 243 (666)
Q Consensus 164 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (666)
++|||++.++.+++.+++++++++++|++......+.. .... .++.++... ...
T Consensus 3171 ~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~----~~~~-~~~~~~~~~---------------------~~~ 3224 (3956)
T PRK12467 3171 AYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPA----PAGD-TALTLDRLD---------------------LNG 3224 (3956)
T ss_pred EeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhccc----ccCC-ceeeecchh---------------------hcc
Confidence 99999999999999999999999999998765433211 1111 122222110 001
Q ss_pred CCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHHHhCc
Q 005991 244 CSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGV 323 (666)
Q Consensus 244 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~ 323 (666)
.....+.....+++++||+|||||||.||||+++|+++.+.+.+....++++++|++++++|++|+.+...++.+|+.|+
T Consensus 3225 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~ 3304 (3956)
T PRK12467 3225 YSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQERFLWTLICGG 3304 (3956)
T ss_pred cCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHHHHHHHHhCCC
Confidence 11112223457899999999999999999999999999999998888899999999999999999999988999999999
Q ss_pred EEEEec---CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHH
Q 005991 324 AVGFYQ---GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRL 400 (666)
Q Consensus 324 ~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~ 400 (666)
++++.+ .++..+++.|+++++|++.++|+++..+.+....
T Consensus 3305 ~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~------------------------------------- 3347 (3956)
T PRK12467 3305 CLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAGG------------------------------------- 3347 (3956)
T ss_pred EEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhcccc-------------------------------------
Confidence 999987 5899999999999999999999999887652100
Q ss_pred hhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCCCC-----CCCCCccCCccCcEE
Q 005991 401 VFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGD-----NLSGHVGSPNPACEI 474 (666)
Q Consensus 401 ~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~-----~~~~~vG~p~~~~~v 474 (666)
...+++|.+++||+++++++.+.|.+.+ ++.++|.||+||++..++...... ....++|+|++|+++
T Consensus 3348 -------~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 3420 (3956)
T PRK12467 3348 -------ADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSI 3420 (3956)
T ss_pred -------cCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEE
Confidence 0014799999999999999999998776 678999999999987766443221 234689999999999
Q ss_pred EEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCC-------CeeecccEEEEecCCcEEEEccCCCe
Q 005991 475 KLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGD-------GWLHTGDIGLWLPGGRLKIIDRKKNI 547 (666)
Q Consensus 475 ~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~-------gw~~TGDlg~~~~dG~l~i~GR~~d~ 547 (666)
+|+| ++++.++.|. .|||+|+|+++++||+|+|+.|+++|..+ +||+|||+|++++||+|+|+||+||+
T Consensus 3421 ~v~d-~~~~~vp~G~---~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~ 3496 (3956)
T PRK12467 3421 YVLD-GQLNPVPVGV---AGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQ 3496 (3956)
T ss_pred EEEC-CCCCCCCCCC---CceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccce
Confidence 9999 6677777665 89999999999999999999999999554 46999999999999999999999999
Q ss_pred EEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCC--CCeEEEEEEcCh------hHHHHHHHHcCCCcccccccccCcch
Q 005991 548 FKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF--NSCLVAIVAVDP------DVLKDWAASQGIKVIYCFSFRANSHV 619 (666)
Q Consensus 548 ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~--~~~~va~vv~~~------~~l~~~~~~~~l~~~~~~~~~~p~~i 619 (666)
||+ +|+||+|.|||++|.+||+|.+|+|++... .+.++|+|+++. ++++++++++ |+ .|++|..|
T Consensus 3497 iki-~G~rIe~~EIE~~l~~~p~V~~a~v~~~~~~~~~~lva~v~~~~~~~~~~~~l~~~l~~~-Lp-----~y~vP~~~ 3569 (3956)
T PRK12467 3497 VKI-RGFRIELGEIEARLLQHPSVREAVVLARDGAGGKQLVAYVVPADPQGDWRETLRDHLAAS-LP-----DYMVPAQL 3569 (3956)
T ss_pred Eee-ceEeecHHHHHHHHhhCcccceEEEEEecCCCCcEEEEEEeCCCCCcccHHHHHHHHhcc-CC-----hhhCCCee
Confidence 998 899999999999999999999999997642 468999999753 6789999988 98 99999999
Q ss_pred hHHH-HHHHHhhhhhhhhhccc
Q 005991 620 IFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 620 ~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
++++ +|.+.+||++|++|.+.
T Consensus 3570 ~~l~~lP~t~~GKidR~~L~~~ 3591 (3956)
T PRK12467 3570 LVLAAMPLGPNGKVDRKALPDP 3591 (3956)
T ss_pred eeeccCCCCCCCccchhhcCCC
Confidence 9995 88888899999999886
No 30
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.2e-68 Score=592.87 Aligned_cols=499 Identities=22% Similarity=0.345 Sum_probs=416.0
Q ss_pred CCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCCHhHHHHHH
Q 005991 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFH-GLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 78 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~-gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
..|+.++|.+.++++|+++|+.+. + +.+||+||.+++.++|.+|.+. |+++|++|+++++|+++|+++++
T Consensus 9 ~~tl~~~l~~~a~~~~~~~a~~~~---~------~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~l 79 (546)
T PRK08314 9 ETSLFHNLEVSARRYPDKTAIVFY---G------RAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYY 79 (546)
T ss_pred CCCHHHHHHHHHHHcCCCcceeec---C------ceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHH
Confidence 458999999999999999999864 3 3599999999999999999999 99999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCC--CC-----CCCC----
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKD--EH-----LPSL---- 225 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~--~~-----~~~~---- 225 (666)
||+++|++++|+++.++.+++.++++++++++++++......+.+....+ .++.++..+... .. ...+
T Consensus 80 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (546)
T PRK08314 80 AILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNL-RLRHVIVAQYSDYLPAEPEIAVPAWLRAE 158 (546)
T ss_pred HHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhcc-CcceEEEecchhhcccccccCcccccccc
Confidence 99999999999999999999999999999999999988777666544433 234444332100 00 0000
Q ss_pred ---CCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEE
Q 005991 226 ---PSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMS 302 (666)
Q Consensus 226 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~ 302 (666)
....+.....|++....... .......++++++|+|||||||.||||++||++++..+......+++.++|++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~ 236 (546)
T PRK08314 159 PPLQALAPGGVVAWKEALAAGLA--PPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVVLA 236 (546)
T ss_pred cccccccccccccHHHHhcccCC--CCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceEEE
Confidence 00011223456666543221 2233457899999999999999999999999999998887777788899999999
Q ss_pred cCChHHHHHHHH-HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Q 005991 303 YLPLAHIYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAY 380 (666)
Q Consensus 303 ~~pl~h~~~~~~-~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 380 (666)
.+|++|.+++.. ++.++..|+++++.+ .++..+++.++++++|++.++|.++..+.....
T Consensus 237 ~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~------------------ 298 (546)
T PRK08314 237 VLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPG------------------ 298 (546)
T ss_pred EcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCC------------------
Confidence 999999999866 667899999999988 699999999999999999999999887754200
Q ss_pred HHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCC
Q 005991 381 NSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDN 460 (666)
Q Consensus 381 ~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~ 460 (666)
..... .+++|.+++||+++++++.+++.+.+++++++.||+||++..+........
T Consensus 299 ----------------~~~~~--------~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~ 354 (546)
T PRK08314 299 ----------------LAERD--------LSSLRYIGGGGAAMPEAVAERLKELTGLDYVEGYGLTETMAQTHSNPPDRP 354 (546)
T ss_pred ----------------ccccC--------chhhheeeeccccCCHHHHHHHHHHcCCcEEecccccccccceecCCCcCC
Confidence 00000 137899999999999999999999899999999999999876665544445
Q ss_pred CCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccC---CCCeeecccEEEEecCCc
Q 005991 461 LSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVID---GDGWLHTGDIGLWLPGGR 537 (666)
Q Consensus 461 ~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~---~~gw~~TGDlg~~~~dG~ 537 (666)
..+++|.|+++++++|+|+++++.++.+. .|||+|+|++++.||+++++.|++.|. +++||+|||+|+++++|.
T Consensus 355 ~~~~~G~~~~g~~~~i~d~~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~ 431 (546)
T PRK08314 355 KLQCLGIPTFGVDARVIDPETLEELPPGE---VGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGY 431 (546)
T ss_pred CCCccCcccCCeEEEEEeCCCCcCCCCCC---ceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCc
Confidence 56789999999999999976777776665 899999999999999999999998873 346999999999999999
Q ss_pred EEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh--------hHHHHHHHHcCCC
Q 005991 538 LKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP--------DVLKDWAASQGIK 606 (666)
Q Consensus 538 l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~--------~~l~~~~~~~~l~ 606 (666)
+++.||+||+||+ +|++|+|.|||+++.++|+|.+++|++.++. +.++|+|++++ ++++++++++ ++
T Consensus 432 l~~~GR~~d~i~~-~G~~v~~~eIE~~i~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~l~~~~~~~-l~ 509 (546)
T PRK08314 432 FFITDRLKRMINA-SGFKVWPAEVENLLYKHPAIQEACVIATPDPRRGETVKAVVVLRPEARGKTTEEEIIAWAREH-MA 509 (546)
T ss_pred EEEEecchhhEEe-CCEEECHHHHHHHHHhCcchheEEEEeCCCcccCceeEEEEEECCCCCCCCCHHHHHHHHHHh-cc
Confidence 9999999999997 7999999999999999999999999997654 67899998643 6789999998 88
Q ss_pred cccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 607 VIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 607 ~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
.+++|+.+++++ +|++.+||++|++|++.
T Consensus 510 -----~~~~P~~~~~v~~iP~t~~GKv~r~~L~~~ 539 (546)
T PRK08314 510 -----AYKYPRIVEFVDSLPKSGSGKILWRQLQEQ 539 (546)
T ss_pred -----cCCCCcEEEEecCCCCCCccceeHHHHHHH
Confidence 999999999995 88888899999999765
No 31
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.6e-68 Score=591.69 Aligned_cols=500 Identities=25% Similarity=0.372 Sum_probs=404.8
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCHhHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINRPEWLIVD 155 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~-~gv~~gd~V~i~~~n~~e~~~~~ 155 (666)
...|+.++|++.++.+|+++|++.. + +.+||+||.++++++|++|.+ .|+++||+|+++++|+++|++++
T Consensus 22 ~~~~~~~~l~~~a~~~p~~~al~~~---~------~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~ 92 (562)
T PRK05677 22 EYPNIQAVLKQSCQRFADKPAFSNL---G------KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAV 92 (562)
T ss_pred ccCcHHHHHHHHHHhCCCCeeEEEC---C------ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHH
Confidence 3468999999999999999999753 2 359999999999999999997 69999999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCC--CC----------
Q 005991 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEH--LP---------- 223 (666)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~--~~---------- 223 (666)
|||+++|++++|+++.++.+++.+++++++++++|++......+.+..... .++.++..+..+.. ..
T Consensus 93 la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (562)
T PRK05677 93 FGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKT-GVKHVIVTEVADMLPPLKRLLINAVVKH 171 (562)
T ss_pred HHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhcc-CcceeEEecccccccchhhhhcccchhh
Confidence 999999999999999999999999999999999999877665554443322 34444443211100 00
Q ss_pred --CCCCCC-CcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccc--cC-CC
Q 005991 224 --SLPSTS-GVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQ--FY-PS 297 (666)
Q Consensus 224 --~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~--~~-~~ 297 (666)
...... ......+.+.+..+...........++++++|+|||||||.||||+++|+++...+......+. +. ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~ 251 (562)
T PRK05677 172 VKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGC 251 (562)
T ss_pred ccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCc
Confidence 000000 0012345555444332222233456899999999999999999999999999877655443332 33 34
Q ss_pred cEEEEcCChHHHHHHHH-HHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHH
Q 005991 298 DIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREK 374 (666)
Q Consensus 298 d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~ 374 (666)
+++++.+|++|.+++.. .+..+..|++.++.+ .++..+++.|+++++|+++++|+++..+......
T Consensus 252 ~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~----------- 320 (562)
T PRK05677 252 EILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAF----------- 320 (562)
T ss_pred cEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCccc-----------
Confidence 68899999999999875 556777888777665 5889999999999999999999999877652000
Q ss_pred HHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhc
Q 005991 375 LFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISA 454 (666)
Q Consensus 375 l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~ 454 (666)
+....+++|.+++||+++++++.+.|++.+++++++.||+||++.+++.
T Consensus 321 -------------------------------~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~ 369 (562)
T PRK05677 321 -------------------------------RKLDFSALKLTLSGGMALQLATAERWKEVTGCAICEGYGMTETSPVVSV 369 (562)
T ss_pred -------------------------------ccCChhhceEEEEcCccCCHHHHHHHHHHcCCCeeccCCccccCcceee
Confidence 0000137999999999999999999999889999999999999876665
Q ss_pred cCCCCCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEec
Q 005991 455 IDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLP 534 (666)
Q Consensus 455 ~~~~~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~ 534 (666)
.......++++|+|+++++++|+| +++..++.|+ .|||+++|+.++.||+++|+.|++.|..+|||+|||+|++|+
T Consensus 370 ~~~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~ 445 (562)
T PRK05677 370 NPSQAIQVGTIGIPVPSTLCKVID-DDGNELPLGE---VGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQE 445 (562)
T ss_pred cCccCCCCCccCccCCCCEEEEEC-CCCCCCCCCC---CeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECC
Confidence 544445678899999999999999 5567777665 899999999999999999999999998899999999999999
Q ss_pred CCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc------ChhHHHHHHHHcCC
Q 005991 535 GGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV------DPDVLKDWAASQGI 605 (666)
Q Consensus 535 dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~------~~~~l~~~~~~~~l 605 (666)
+|.++|.||++|+||+ +|++|+|.+||++|.+||+|.+++|++.+++ +.++++|++ +.++++++++++ +
T Consensus 446 ~G~l~i~GR~~d~i~~-~G~~i~p~eiE~~l~~~~~v~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~-l 523 (562)
T PRK05677 446 DGYMRIVDRKKDMILV-SGFNVYPNELEDVLAALPGVLQCAAIGVPDEKSGEAIKVFVVVKPGETLTKEQVMEHMRAN-L 523 (562)
T ss_pred CCcEEEEecCcCeEEe-CCEEECHHHHHHHHHhCCCccEEEEEeccCccCCceEEEEEEeCCCCCCCHHHHHHHHHHh-h
Confidence 9999999999999997 7999999999999999999999999997754 577888874 346899999998 8
Q ss_pred CcccccccccCcchhHHH-HHHHHhhhhhhhhhcc
Q 005991 606 KVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFR 639 (666)
Q Consensus 606 ~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~ 639 (666)
+ .|++|..+.+++ +|.+.+||++|++|+.
T Consensus 524 ~-----~~~~P~~i~~v~~iP~t~sGKi~r~~L~~ 553 (562)
T PRK05677 524 T-----GYKVPKAVEFRDELPTTNVGKILRRELRD 553 (562)
T ss_pred h-----hccCCcEEEEeccCCCCCcccccHHHHHH
Confidence 8 999999999995 8888889999999975
No 32
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.4e-68 Score=588.60 Aligned_cols=482 Identities=20% Similarity=0.265 Sum_probs=402.4
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
.++.++|.+.++++||++|+.+. + +.+||+||+++++++|++|.++|+++|++|+++++|+++|+++++||
T Consensus 43 ~~~~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~ 113 (537)
T PRK13382 43 MGPTSGFAIAAQRCPDRPGLIDE---L------GTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAA 113 (537)
T ss_pred CCHHHHHHHHHHhCCCCeEEEeC---C------CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHH
Confidence 57999999999999999999753 2 25999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHH
Q 005991 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQ 238 (666)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (666)
+++|++++|+++.++.+++.+++++++++++|++......+.+.....+....++..++... ...++.
T Consensus 114 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 181 (537)
T PRK13382 114 NRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDEDH------------DLTVEV 181 (537)
T ss_pred HHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCcc------------cccHHH
Confidence 99999999999999999999999999999999998776666554444444444443322110 123444
Q ss_pred HHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHH
Q 005991 239 LQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVS 318 (666)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~ 318 (666)
+...... ......+++.++++|||||||.||||+++|+++..........+.+..++++++.+|++|.+++...+.+
T Consensus 182 ~~~~~~~---~~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~ 258 (537)
T PRK13382 182 LIAAHAG---QRPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLA 258 (537)
T ss_pred HhhccCc---CCCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHH
Confidence 4432211 1112356889999999999999999999999988877776666778889999999999999999878889
Q ss_pred HHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhh
Q 005991 319 VYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMW 397 (666)
Q Consensus 319 l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~ 397 (666)
+..|+++++.. +++..+++.|+++++|++.++|+++..|.+......
T Consensus 259 l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-------------------------------- 306 (537)
T PRK13382 259 ASLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVR-------------------------------- 306 (537)
T ss_pred HhcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhc--------------------------------
Confidence 99999998876 799999999999999999999999998865211000
Q ss_pred hHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC-CCCCCCccCCccCcEEEE
Q 005991 398 DRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPACEIKL 476 (666)
Q Consensus 398 d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~~v~i 476 (666)
......++|.+++||+++++++.+.|.+.++.++++.||+||++.+++..... ....+++|+|+++++++|
T Consensus 307 --------~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i 378 (537)
T PRK13382 307 --------NRYSGRSLRFAAASGSRMRPDVVIAFMDQFGDVIYNNYNATEAGMIATATPADLRAAPDTAGRPAEGTEIRI 378 (537)
T ss_pred --------ccCCccceeEEEEcCCCCCHHHHHHHHHHcCCcEEecccccccCcceecChhHhccCCCCccccCcCcEEEE
Confidence 00001379999999999999999999998999999999999998765543321 245679999999999999
Q ss_pred EecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeee
Q 005991 477 VDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYV 556 (666)
Q Consensus 477 vd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v 556 (666)
+| ++++.++.+. .|||+++|++++.||+ ++.|+. + .+|||+|||++++++||+++|+||+||+||+ +|++|
T Consensus 379 ~d-~~~~~~~~g~---~GEl~v~g~~~~~gY~--~~~~~~-~-~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~-~G~~v 449 (537)
T PRK13382 379 LD-QDFREVPTGE---VGTIFVRNDTQFDGYT--SGSTKD-F-HDGFMASGDVGYLDENGRLFVVGRDDEMIVS-GGENV 449 (537)
T ss_pred EC-CCCCCCCCCC---eeEEEEEcCCcccCcc--ccchhh-c-cCCCEeeCceEEEeCCCcEEEeccccceeEE-CCEEE
Confidence 99 5666666655 8999999999999998 556654 3 4799999999999999999999999999996 89999
Q ss_pred ccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcchhHHH-HHH
Q 005991 557 APEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIH 626 (666)
Q Consensus 557 ~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~ 626 (666)
+|.+||++|.+||+|.+|+|++.++. +.++|+|+++ .++++++++++ ++ .+++|..+.+++ +|+
T Consensus 450 ~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~l~~~-l~-----~~~~P~~i~~v~~lP~ 523 (537)
T PRK13382 450 YPIEVEKTLATHPDVAEAAVIGVDDEQYGQRLAAFVVLKPGASATPETLKQHVRDN-LA-----NYKVPRDIVVLDELPR 523 (537)
T ss_pred CHHHHHHHHHhCCCEeeEEEEccCccccCCEEEEEEEECCCCCCCHHHHHHHHHHh-cc-----CCCCCcEEEEeccCCC
Confidence 99999999999999999999997754 5688999864 36789999998 88 999999999995 888
Q ss_pred HHhhhhhhhhhcc
Q 005991 627 NLCQLYSSKELFR 639 (666)
Q Consensus 627 ~~~gK~~r~~l~~ 639 (666)
+.+||++|++|++
T Consensus 524 t~~gK~~r~~L~~ 536 (537)
T PRK13382 524 GATGKILRRELQA 536 (537)
T ss_pred CCCCCCcHHhhCC
Confidence 8889999999975
No 33
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.7e-68 Score=599.73 Aligned_cols=523 Identities=16% Similarity=0.176 Sum_probs=409.8
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
..+..+++|+++++.+||++|+++. +...+..+.+||+||.++++++|++|.++|+++||+|+++++|+++++++++
T Consensus 51 ~~n~~~~~l~~~~~~~p~~~A~~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~l 127 (629)
T PRK10524 51 RTNLCHNAVDRHLAKRPEQLALIAV---STETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAML 127 (629)
T ss_pred EeeHHHHHHHHhhccCCCCeEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4455688999999999999999875 3222345789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEcccc---------HHHHHHhhhcC-CCceEEEEeCCCCCCCCCCC
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT---------LNTLLSFISEI-PSVHLIVVVGGKDEHLPSLP 226 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~-~~l~~ii~~~~~~~~~~~~~ 226 (666)
||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+.+..... +....++.++...... ..
T Consensus 128 A~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~- 205 (629)
T PRK10524 128 ACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPM-AR- 205 (629)
T ss_pred HHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc-Cc-
Confidence 999999999999999999999999999999999997532 23333333322 2344555554321110 00
Q ss_pred CCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHh-hcccccccCCCcEEEEcCC
Q 005991 227 STSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVA-GFSLMVQFYPSDIYMSYLP 305 (666)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~-~~~~~~~~~~~d~~l~~~p 305 (666)
.......|.++.........+.....++++++|+|||||||.||||+++|++++.... .....+++.++|++++.+|
T Consensus 206 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 283 (629)
T PRK10524 206 --VAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASD 283 (629)
T ss_pred --ccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCC
Confidence 0011235666544322211222234678999999999999999999999999754433 3344567889999999999
Q ss_pred hHHHHHHHH-HHHHHHhCcEEEEec-----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHH
Q 005991 306 LAHIYERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAA 379 (666)
Q Consensus 306 l~h~~~~~~-~~~~l~~G~~~~~~~-----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~ 379 (666)
+.|..+... ++.+++.|+++++++ .++..+++.++++++|++.++|+++..|.+......
T Consensus 284 ~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-------------- 349 (629)
T PRK10524 284 IGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALL-------------- 349 (629)
T ss_pred CCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccc--------------
Confidence 999888654 678899999999876 368899999999999999999999987754210000
Q ss_pred HHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCC--
Q 005991 380 YNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDK-- 457 (666)
Q Consensus 380 ~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~-- 457 (666)
+....+++|.+++||+++++++.+++.+.+++++++.||+||++..+.....
T Consensus 350 --------------------------~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~ 403 (629)
T PRK10524 350 --------------------------RKHDLSSLRALFLAGEPLDEPTASWISEALGVPVIDNYWQTETGWPILAIARGV 403 (629)
T ss_pred --------------------------cccChhheeEEEEeCCCCCHHHHHHHHHhcCCCeEeccccccccchhhcCCCCc
Confidence 0000148999999999999999999999899999999999999853332222
Q ss_pred --CCCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCC---CcCccccCChhhhhhcc---CCCCeeecccE
Q 005991 458 --GDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGP---IVFQGYYKNEVQTREVI---DGDGWLHTGDI 529 (666)
Q Consensus 458 --~~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~---~v~~GY~~~~~~t~~~~---~~~gw~~TGDl 529 (666)
.....+++|+|++|++++|+|.+++..++.+. .|||+|+|| +++.|||++++.+.+.+ ..+|||+|||+
T Consensus 404 ~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~---~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl 480 (629)
T PRK10524 404 EDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNE---KGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDW 480 (629)
T ss_pred ccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCC---cEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCc
Confidence 12456789999999999999954777666654 899999998 68899999998877654 24689999999
Q ss_pred EEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh-------------
Q 005991 530 GLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP------------- 593 (666)
Q Consensus 530 g~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~------------- 593 (666)
|++|+||+++|+||.||+||+ +|++|+|.|||++|.+||+|.+|+|++.+++ +.++++|++.+
T Consensus 481 ~~~d~dG~l~i~GR~dd~i~~-~G~ri~p~eIE~~l~~~p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~ 559 (629)
T PRK10524 481 GIRDADGYYFILGRTDDVINV-AGHRLGTREIEESISSHPAVAEVAVVGVKDALKGQVAVAFVVPKDSDSLADREARLAL 559 (629)
T ss_pred EEEcCCCcEEEEEEecCeEEe-CCEEeCHHHHHHHHHhCCCcceEEEEccccCCCCeEEEEEEEECCCCccccccchHHH
Confidence 999999999999999999997 7999999999999999999999999998765 57889998642
Q ss_pred -hHHHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccchhhhhcCCCccceehh
Q 005991 594 -DVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRSRCCYRTGRDSSVFCQE 656 (666)
Q Consensus 594 -~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~~~~~~~~~~~~~~~~~ 656 (666)
++++++++++ ++ .+++|..|.+++ +|++.+||++|+.|++...-.-.+..+++--++
T Consensus 560 ~~~i~~~~~~~-l~-----~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~~~~~~~~~~~~~ 618 (629)
T PRK10524 560 EKEIMALVDSQ-LG-----AVARPARVWFVSALPKTRSGKLLRRAIQAIAEGRDPGDLTTIEDPA 618 (629)
T ss_pred HHHHHHHHHhh-cC-----CCcCCCEEEEcCCCCCCCCcchHHHHHHHHHcCCCCCCcccccCHH
Confidence 4677888888 88 999999999995 888888999999998763322233444444333
No 34
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.9e-68 Score=599.95 Aligned_cols=507 Identities=20% Similarity=0.236 Sum_probs=397.4
Q ss_pred CCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH
Q 005991 76 PEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD 155 (666)
Q Consensus 76 ~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~ 155 (666)
+...|+.++|++.++++||++|+.+....+...+.++.+||+||.++++++|++|.+. +++||+|+++++|+++|++++
T Consensus 18 ~~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~ 96 (631)
T PRK07769 18 PPNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAF 96 (631)
T ss_pred cccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHH
Confidence 3457899999999999999999986411111123457899999999999999999987 899999999999999999999
Q ss_pred HHHHhcCCeEEec-CCCCC--HHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCC--ceEEEEeCCCCCCCCCCCCCCC
Q 005991 156 HACSAYSYISVPL-YDTLG--PDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPS--VHLIVVVGGKDEHLPSLPSTSG 230 (666)
Q Consensus 156 lA~~~~G~~~vpl-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--l~~ii~~~~~~~~~~~~~~~~~ 230 (666)
|||+++|++++|+ ++..+ .+++.+++++++++++|++....+.+.+.....+. ...++.++.....
T Consensus 97 lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 167 (631)
T PRK07769 97 FGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDAVPDE--------- 167 (631)
T ss_pred HHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEccccccc---------
Confidence 9999999999999 45554 68899999999999999998766655544333321 1223333221000
Q ss_pred cEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHH
Q 005991 231 VKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIY 310 (666)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 310 (666)
. . . ........++++++|+|||||||.||||++||+++.+.+......+++.++|++++++|++|++
T Consensus 168 ---------~--~-~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~ 234 (631)
T PRK07769 168 ---------V--G-A-TWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDM 234 (631)
T ss_pred ---------c--c-c-ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCch
Confidence 0 0 0 0111234679999999999999999999999999998887777778888999999999999999
Q ss_pred HHHHHHHHHHhCcEEEEec---C--CHHHHHHHHHhhcC---eEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 005991 311 ERANQIVSVYYGVAVGFYQ---G--DNLKLMDDLAVLKP---TIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNS 382 (666)
Q Consensus 311 ~~~~~~~~l~~G~~~~~~~---~--~~~~~~~~i~~~~~---t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 382 (666)
++...+.+++.|+++++++ + ++..+++.++++++ +++..+|.++..+..... ....
T Consensus 235 gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~--~~~~-------------- 298 (631)
T PRK07769 235 GLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARG--LPKD-------------- 298 (631)
T ss_pred hhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhc--cchh--------------
Confidence 9988788888899998875 2 88899999998886 789999998876643100 0000
Q ss_pred HHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh---CC---ccccCcccchhhhhhhccC
Q 005991 383 KKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF---GC---QVMEGYGMTETSCIISAID 456 (666)
Q Consensus 383 k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~---~~---~v~~~YG~TE~~~~~~~~~ 456 (666)
+ .+ .+ ..+++|.+++||+++++++.+.|.+.+ |+ .++++||+||++..++...
T Consensus 299 -------~-~~--~~-----------~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~ 357 (631)
T PRK07769 299 -------G-EP--PL-----------DLSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTP 357 (631)
T ss_pred -------c-cc--Cc-----------chhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccC
Confidence 0 00 00 014899999999999999999999877 33 5999999999876555432
Q ss_pred CCC---------------------------CCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccC
Q 005991 457 KGD---------------------------NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYK 509 (666)
Q Consensus 457 ~~~---------------------------~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~ 509 (666)
... ....++|+|.++++++|+|.+++..++.++ .|||||+|++++.|||+
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge---~GEl~v~gp~v~~GY~~ 434 (631)
T PRK07769 358 MDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPETASELPDGQ---IGEIWLHGNNIGTGYWG 434 (631)
T ss_pred CCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCCCcCCCCCC---EEEEEecCCCccccccC
Confidence 211 012479999999999999976677666665 89999999999999999
Q ss_pred ChhhhhhccC-----------------CCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhc-CcCc
Q 005991 510 NEVQTREVID-----------------GDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAK-CKFV 571 (666)
Q Consensus 510 ~~~~t~~~~~-----------------~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~-~p~V 571 (666)
+++.|++.|. .+|||+|||+|+++ ||+|+|+||+||+||+ +|++|+|.|||++|.+ ||.|
T Consensus 435 ~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR~~d~Ik~-~G~~V~p~eIE~~l~~~~p~v 512 (631)
T PRK07769 435 KPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-DGELYITGRVKDLVII-DGRNHYPQDLEYTAQEATKAL 512 (631)
T ss_pred ChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-CCEEEEEcccccEEEE-CCeeeCHHHHHHHHHhccccc
Confidence 9999999884 25899999999995 9999999999999997 8999999999999986 8999
Q ss_pred ce--EEEEEeCC----------------------CCeEEEEEEcC-------hhHHHHHHHHcCCCcccccc-cc-cCcc
Q 005991 572 LQ--CFIYGDSF----------------------NSCLVAIVAVD-------PDVLKDWAASQGIKVIYCFS-FR-ANSH 618 (666)
Q Consensus 572 ~~--~~V~g~~~----------------------~~~~va~vv~~-------~~~l~~~~~~~~l~~~~~~~-~~-~p~~ 618 (666)
.+ |+|++.++ .+.++|+|++. .+++.++++++ ++ . ++ .|+.
T Consensus 513 ~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~ge~~~a~v~~~~~~~~~~~~~l~~~~~~~-l~-----~~~~~~p~~ 586 (631)
T PRK07769 513 RTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTSEQLVIVAERAPGAHKLDPQPIADDIRAA-IA-----VRHGVTVRD 586 (631)
T ss_pred cCCcEEEEEecccccccccccccccccccccCCCCccEEEEEEecCccccccHHHHHHHHHHH-HH-----HHcCCCccE
Confidence 98 89998776 24688888752 36788899988 65 4 56 4888
Q ss_pred hhHHH---HHHHHhhhhhhhhhccchhhhhcCCCccceehh
Q 005991 619 VIFIA---LIHNLCQLYSSKELFRSRCCYRTGRDSSVFCQE 656 (666)
Q Consensus 619 i~~v~---~~~~~~gK~~r~~l~~~~~~~~~~~~~~~~~~~ 656 (666)
+.+++ +|++.+||++|++|++ .|..++..+.|-|+
T Consensus 587 ~~~v~~~~lP~t~~GKi~r~~l~~---~~~~~~~~~~~~~~ 624 (631)
T PRK07769 587 VLLVPAGSIPRTSSGKIARRACRA---AYLDGSLRSGYGQP 624 (631)
T ss_pred EEEECCCccccCCCcHHHHHHHHH---HHHcCCCccccCCC
Confidence 88884 8999999999999975 45666666655544
No 35
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.7e-68 Score=598.99 Aligned_cols=515 Identities=20% Similarity=0.282 Sum_probs=389.5
Q ss_pred CccccCCCCCCcccccCCCCCCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCC
Q 005991 56 WNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGL 135 (666)
Q Consensus 56 ~~~~r~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv 135 (666)
++.+|+...+-.....+++.+...++.++|+++++++||++|+.+. +...+.++.+||+||.++++++|++|.+.|+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~pd~~a~~~~---~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv 102 (624)
T PRK12582 26 ISVERRADGSIVIKSRHPLGPYPRSIPHLLAKWAAEAPDRPWLAQR---EPGHGQWRKVTYGEAKRAVDALAQALLDLGL 102 (624)
T ss_pred eEEEEcCCceEEEecCCCCCCcccCHHHHHHHHHHHCCCchheecc---cCCCCceEEeEHHHHHHHHHHHHHHHHHcCC
Confidence 4455554433333334666667889999999999999999999765 3212446789999999999999999999999
Q ss_pred CCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCH-----HHHHHHHHhcCceEEEEcccc-HHHHHHhhhcCCCc
Q 005991 136 QKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGP-----DAVKYVVNHAEIEAIFCIPQT-LNTLLSFISEIPSV 209 (666)
Q Consensus 136 ~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~-----~~l~~~l~~~~~~~vi~~~~~-~~~~~~~~~~~~~l 209 (666)
++||+|+++++|+++|+++++||+++|++++|+++.++. +++.+++++++++++|++... .......... ..+
T Consensus 103 ~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~ 181 (624)
T PRK12582 103 DPGRPVMILSGNSIEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDL-LDV 181 (624)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhh-cCc
Confidence 999999999999999999999999999999999999885 899999999999999998642 1222221111 123
Q ss_pred eEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCCCCC--CCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhh
Q 005991 210 HLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSP--QPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAG 287 (666)
Q Consensus 210 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~ 287 (666)
+ ++.++.... .....++.++........ .......++++++|+|||||||.||||++||+++.+.+..
T Consensus 182 ~-~i~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~ 251 (624)
T PRK12582 182 T-VVHVTGPGE---------GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAM 251 (624)
T ss_pred e-EEEEcCCCc---------ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHH
Confidence 3 333332110 111245566554322110 0112346799999999999999999999999999887765
Q ss_pred cccccccCC---CcEEEEcCChHHHHHHHH-HHHHHHhCcEEEEec--CC---HHHHHHHHHhhcCeEEeechHHHHHHH
Q 005991 288 FSLMVQFYP---SDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GD---NLKLMDDLAVLKPTIFPSVPRLYNRIY 358 (666)
Q Consensus 288 ~~~~~~~~~---~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~---~~~~~~~i~~~~~t~~~~~P~~~~~l~ 358 (666)
......... .+++++++|++|.+++.. ++.++..|+++++.+ ++ ...+++.++++++|+++++|+++..|.
T Consensus 252 ~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~ 331 (624)
T PRK12582 252 QEQLRPREPDPPPPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLA 331 (624)
T ss_pred HHHhccccCCCCCceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHH
Confidence 544444433 589999999999999876 456889999998865 22 345678889999999999999998886
Q ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh---
Q 005991 359 AGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF--- 435 (666)
Q Consensus 359 ~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~--- 435 (666)
+.+... + ..+....+++|.+++||+++++++.++|.+.+
T Consensus 332 ~~~~~~----~----------------------------------~~~~~~~~slr~i~~gGa~l~~~~~~~~~~~~~~~ 373 (624)
T PRK12582 332 EAMEKD----D----------------------------------ALRRSFFKNLRLMAYGGATLSDDLYERMQALAVRT 373 (624)
T ss_pred HHHhhC----H----------------------------------HHHHHHhhheeEEEecCCCCCHHHHHHHHHHHHhh
Confidence 532110 0 00111124899999999999999999998753
Q ss_pred ---CCccccCcccchhhhhhhccCCCCCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChh
Q 005991 436 ---GCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEV 512 (666)
Q Consensus 436 ---~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~ 512 (666)
+++++++||+||++.+++.........+++|+|+||++++|++ .| +.|||+|+|++++.|||++|+
T Consensus 374 ~g~~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~~--------~G---~~GEl~vrg~~v~~GY~~~p~ 442 (624)
T PRK12582 374 TGHRIPFYTGYGATETAPTTTGTHWDTERVGLIGLPLPGVELKLAP--------VG---DKYEVRVKGPNVTPGYHKDPE 442 (624)
T ss_pred cCCCceEEeccccccccceeecccCCCCCCCCCCcCCCCcEEEEcc--------CC---CceEEEEECCcccccccCCcc
Confidence 3679999999999876553333445678999999999999974 23 379999999999999999999
Q ss_pred hhhhccCCCCeeecccEEEE-e---cCCcEEEEccCCCeEEcCCeeeeccHHHH--HHHhcCcCcceEEEEEeCCCCeEE
Q 005991 513 QTREVIDGDGWLHTGDIGLW-L---PGGRLKIIDRKKNIFKLAQGEYVAPEKIE--NVYAKCKFVLQCFIYGDSFNSCLV 586 (666)
Q Consensus 513 ~t~~~~~~~gw~~TGDlg~~-~---~dG~l~i~GR~~d~ikl~~G~~v~p~eIE--~~l~~~p~V~~~~V~g~~~~~~~v 586 (666)
.|++.|+.||||+|||+|++ | ++|+|+|+||+||+||+++|++|+|.+|| .++.+||.|.+|+|+|.+ ++.+.
T Consensus 443 ~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~~p~V~~a~VvG~~-~~~~g 521 (624)
T PRK12582 443 LTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAACSPVIHDAVVAGQD-RAFIG 521 (624)
T ss_pred chhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhcCcchheEEEEcCC-CCcEE
Confidence 99999988999999999998 4 56999999999999998889999998885 688999999999999986 66788
Q ss_pred EEEEcChhH--------------------HHHHHHHcCCCcc--cccccc-cCcchhHHH-HHHHHhhhhhhh
Q 005991 587 AIVAVDPDV--------------------LKDWAASQGIKVI--YCFSFR-ANSHVIFIA-LIHNLCQLYSSK 635 (666)
Q Consensus 587 a~vv~~~~~--------------------l~~~~~~~~l~~~--~~~~~~-~p~~i~~v~-~~~~~~gK~~r~ 635 (666)
++|+|+.+. +.++++++ |... ....+. .|+++.+++ .|.+.+||+..+
T Consensus 522 ~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~ 593 (624)
T PRK12582 522 LLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREG-LSAHNAEAGGSSSRIARALLMTEPPSIDAGEITDK 593 (624)
T ss_pred EEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHH-HHHHHhhcCCChhheEEEEEeCCCCCccCCcCCcc
Confidence 888876543 33444444 4310 112333 899888886 444445666544
No 36
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1.2e-67 Score=590.48 Aligned_cols=488 Identities=24% Similarity=0.334 Sum_probs=394.3
Q ss_pred HHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCHhHHHHHHHHH
Q 005991 81 LHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINRPEWLIVDHACS 159 (666)
Q Consensus 81 l~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~-~gv~~gd~V~i~~~n~~e~~~~~lA~~ 159 (666)
+..+|.+ +.+|+++|+++. ++ ...+||+||.++++++|++|.+ .|+++||+|+++++|+++|+++++||+
T Consensus 43 ~~~l~~~--~~~~~~~a~~~~---~~----~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~ 113 (560)
T PLN02574 43 VSFIFSH--HNHNGDTALIDS---ST----GFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVL 113 (560)
T ss_pred HHHHhcC--cccCCCCEEEEC---CC----CCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHH
Confidence 3455554 679999999753 21 1258999999999999999999 999999999999999999999999999
Q ss_pred hcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHH
Q 005991 160 AYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQL 239 (666)
Q Consensus 160 ~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (666)
++|++++|++|.++.+++.++++++++++++++.+....+... ... ++.++...... ........|.++
T Consensus 114 ~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~-----~~~~~~~~~~~~ 182 (560)
T PLN02574 114 SLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL-----GVP-VIGVPENYDFD-----SKRIEFPKFYEL 182 (560)
T ss_pred HhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc-----CCc-EEecCcccccc-----cCccCcccHHHH
Confidence 9999999999999999999999999999999998765554331 111 22222110000 000112345555
Q ss_pred HhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccc----ccc-cCCCcEEEEcCChHHHHHHHH
Q 005991 240 QSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL----MVQ-FYPSDIYMSYLPLAHIYERAN 314 (666)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~----~~~-~~~~d~~l~~~pl~h~~~~~~ 314 (666)
...... ..+.....++++++|+|||||||.||||++||+++.+.+..+.. ... ....+++++.+|++|.+++..
T Consensus 183 ~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~ 261 (560)
T PLN02574 183 IKEDFD-FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSL 261 (560)
T ss_pred hhcCCc-ccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHH
Confidence 443322 11223346789999999999999999999999999887765432 122 235689999999999999876
Q ss_pred -HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCC
Q 005991 315 -QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT 392 (666)
Q Consensus 315 -~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~ 392 (666)
++.++..|+++++.+ +++..+++.++++++|++.++|+++..|.+.....
T Consensus 262 ~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~---------------------------- 313 (560)
T PLN02574 262 FVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGV---------------------------- 313 (560)
T ss_pred HHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCcccc----------------------------
Confidence 456778899998887 79999999999999999999999999886531100
Q ss_pred CChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCC--CCCCCCCccCCc
Q 005991 393 PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDK--GDNLSGHVGSPN 469 (666)
Q Consensus 393 ~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~--~~~~~~~vG~p~ 469 (666)
.....+++|.+++||+++++++.+.+.+.+ ++.+++.||+||++.+++.... .....+++|.|.
T Consensus 314 -------------~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~ 380 (560)
T PLN02574 314 -------------CGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLA 380 (560)
T ss_pred -------------ccCccccceEEEEecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeC
Confidence 000014899999999999999999998877 7899999999999865443222 124567899999
Q ss_pred cCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEE
Q 005991 470 PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (666)
Q Consensus 470 ~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ik 549 (666)
++++++|+|+++++.++.++ .|||||+|++++.|||++++.|++.|+.+|||+|||+|++|+||+++|+||+||+||
T Consensus 381 ~~~~v~i~d~~~g~~~~~g~---~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~ 457 (560)
T PLN02574 381 PNMQAKVVDWSTGCLLPPGN---CGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIK 457 (560)
T ss_pred CCcEEEEEeCCCCcCCCCCC---CeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheE
Confidence 99999999977777776665 899999999999999999999999998899999999999999999999999999999
Q ss_pred cCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcchh
Q 005991 550 LAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSHVI 620 (666)
Q Consensus 550 l~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~i~ 620 (666)
+ +|++|+|.|||++|.+||+|.+++|++.++. +.++++|+++ .+++.++++++ ++ .|+.|+.+.
T Consensus 458 ~-~G~~v~~~eiE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~-l~-----~~~~p~~v~ 530 (560)
T PLN02574 458 Y-KGFQIAPADLEAVLISHPEIIDAAVTAVPDKECGEIPVAFVVRRQGSTLSQEAVINYVAKQ-VA-----PYKKVRKVV 530 (560)
T ss_pred E-CCEEECHHHHHHHHHhCCCcceEEEEccccCCCCcceEEEEEeCCCCCCCHHHHHHHHHHh-cc-----CcccCcEEE
Confidence 7 8999999999999999999999999997653 5688998863 47899999998 88 999999998
Q ss_pred HHH-HHHHHhhhhhhhhhccc
Q 005991 621 FIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 621 ~v~-~~~~~~gK~~r~~l~~~ 640 (666)
+++ +|++.+||++|++|++.
T Consensus 531 ~v~~iP~t~~GKi~r~~L~~~ 551 (560)
T PLN02574 531 FVQSIPKSPAGKILRRELKRS 551 (560)
T ss_pred EeeccCCCCcchhhHHHHHHH
Confidence 885 77888899999999865
No 37
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=5e-67 Score=583.18 Aligned_cols=492 Identities=25% Similarity=0.364 Sum_probs=410.0
Q ss_pred CCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH
Q 005991 76 PEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD 155 (666)
Q Consensus 76 ~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~ 155 (666)
++..|+.+++.++++++|+++|+++. +. .+++||.||.++++++|++|.+.|+++||+|+++++|+++|++++
T Consensus 20 ~~~~~~~~~l~~~~~~~~~~~a~~~~---~~----~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~ 92 (537)
T PLN02246 20 PNHLPLHDYCFERLSEFSDRPCLIDG---AT----GRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAF 92 (537)
T ss_pred CCCCcHHHHHHHHHHhCCCCeEEEec---CC----CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHH
Confidence 45678999999999999999999753 21 246999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEe
Q 005991 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLIS 235 (666)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (666)
+||+++|++++|+++.++.+++..+++.++++++|++....+.+...... +.+ .++.++... ....+
T Consensus 93 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~-~~~-~~i~~~~~~-----------~~~~~ 159 (537)
T PLN02246 93 LGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAED-DGV-TVVTIDDPP-----------EGCLH 159 (537)
T ss_pred HHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhc-CCc-eEEEeCCCC-----------CCcee
Confidence 99999999999999999999999999999999999998777666554321 222 344444321 01234
Q ss_pred hHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccc----ccccCCCcEEEEcCChHHHHH
Q 005991 236 YLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL----MVQFYPSDIYMSYLPLAHIYE 311 (666)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~~ 311 (666)
+.++...... ..+.....++++++++|||||||.||||+++|++++..+..... .+++.++|++++.+|++|.++
T Consensus 160 ~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~ 238 (537)
T PLN02246 160 FSELTQADEN-ELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYS 238 (537)
T ss_pred HHHHhcCCCC-CCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHH
Confidence 5554432211 12233456899999999999999999999999999887665432 467889999999999999999
Q ss_pred HHH-HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHc
Q 005991 312 RAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVS 389 (666)
Q Consensus 312 ~~~-~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~ 389 (666)
+.. ++.++..|+++++.+ .++..+++.|+++++|++.++|+++..|.+.....
T Consensus 239 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~------------------------- 293 (537)
T PLN02246 239 LNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVE------------------------- 293 (537)
T ss_pred HHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCcccc-------------------------
Confidence 866 567899999999988 78999999999999999999999988775421000
Q ss_pred CCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccC-----CCCCCCC
Q 005991 390 GQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAID-----KGDNLSG 463 (666)
Q Consensus 390 ~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~-----~~~~~~~ 463 (666)
....+++|.+++||+++++++.+++++.+ ++.+++.||+||++.+++... ......+
T Consensus 294 -----------------~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~ 356 (537)
T PLN02246 294 -----------------KYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSG 356 (537)
T ss_pred -----------------ccCccceeEEEEecCcCCHHHHHHHHHHcCCCeEeccccccccCcccccccccCCCCccccCC
Confidence 00014799999999999999999999987 788999999999986554321 1123567
Q ss_pred CccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEcc
Q 005991 464 HVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDR 543 (666)
Q Consensus 464 ~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR 543 (666)
++|+|+++++++|+|++++..++.+. .|||+++|++++.||+++++.|++.|+.+|||+|||+|+++++|++++.||
T Consensus 357 ~~G~~~~~~~~~i~d~~~~~~~~~g~---~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR 433 (537)
T PLN02246 357 SCGTVVRNAELKIVDPETGASLPRNQ---PGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDR 433 (537)
T ss_pred ccccccCCcEEEEecCCCCCcCCCCC---ceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEec
Confidence 89999999999999966677776665 899999999999999999999999998899999999999999999999999
Q ss_pred CCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCcccccccc
Q 005991 544 KKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFR 614 (666)
Q Consensus 544 ~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~ 614 (666)
.||+||+ +|++|+|.+||+.+.+||+|.+|+|++.++. +.++++|+++ +++++++++++ ++ .|+
T Consensus 434 ~dd~i~~-~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~-l~-----~~~ 506 (537)
T PLN02246 434 LKELIKY-KGFQVAPAELEALLISHPSIADAAVVPMKDEVAGEVPVAFVVRSNGSEITEDEIKQFVAKQ-VV-----FYK 506 (537)
T ss_pred ccceEEE-CCEEECcHHHHHHHHhCCCeeEEEEEcccCccCCceeEEEEEeCCCCCCCHHHHHHHHHhh-Cc-----Ccc
Confidence 9999997 8999999999999999999999999987644 5788888864 46899999998 88 999
Q ss_pred cCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 615 ANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 615 ~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
.|.++.+++ +|++.+||++|++|++.
T Consensus 507 ~p~~i~~~~~~P~t~~GKi~r~~L~~~ 533 (537)
T PLN02246 507 RIHKVFFVDSIPKAPSGKILRKDLRAK 533 (537)
T ss_pred ccceEEEeccCCCCCcchhhHHHHHHH
Confidence 999998885 88888899999998764
No 38
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=2.9e-67 Score=595.04 Aligned_cols=492 Identities=17% Similarity=0.180 Sum_probs=388.0
Q ss_pred hCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCC
Q 005991 91 NYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYD 170 (666)
Q Consensus 91 ~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~ 170 (666)
+.++++|+++. +. .+..+.+||+||.+++.++|++|.++|+++||+|+++++|++++++++|||+++|++++|+++
T Consensus 96 ~~~~~~a~~~~---~~-~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp~~~ 171 (652)
T TIGR01217 96 AAGTEPALLYV---DE-THEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVGAIWSSCSP 171 (652)
T ss_pred cCCCCeEEEEE---CC-CCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEecCC
Confidence 36789999875 32 244578999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEEcccc---------HHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHh
Q 005991 171 TLGPDAVKYVVNHAEIEAIFCIPQT---------LNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQS 241 (666)
Q Consensus 171 ~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (666)
.++++++.+++++++++++|+++.. .+.+.+....++.++.++.++........... ......|+++..
T Consensus 172 ~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~ 249 (652)
T TIGR01217 172 DFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEAPK--IDGALDLEDFTA 249 (652)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCccccccc--ccCcccHHHHHh
Confidence 9999999999999999999998643 35555555667777777766532211000000 001245777665
Q ss_pred cCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHH-HHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHHH
Q 005991 242 QGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLIS-NVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVY 320 (666)
Q Consensus 242 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~-~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~ 320 (666)
.............++++++|+|||||||.||||++||++++. .+......+++.++|++++++|+.|+.. ..++.+|+
T Consensus 250 ~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~l~ 328 (652)
T TIGR01217 250 AAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMW-NWLVSGLA 328 (652)
T ss_pred cccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhh-HHHHHHHh
Confidence 422211222345679999999999999999999999998653 4444445578899999999999999864 33557899
Q ss_pred hCcEEEEec-----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCCh
Q 005991 321 YGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSK 395 (666)
Q Consensus 321 ~G~~~~~~~-----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~ 395 (666)
.|+++++++ .++..+++.++++++|++..+|.++..+.... ..+..
T Consensus 329 ~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~-----------------------------~~~~~ 379 (652)
T TIGR01217 329 TGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAG-----------------------------VHPAR 379 (652)
T ss_pred cCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcC-----------------------------CCccc
Confidence 999999986 26889999999999999988887766553210 00000
Q ss_pred hhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhC--CccccCcccchhhhhhhcc-CCCCCCCCCccCCccCc
Q 005991 396 MWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG--CQVMEGYGMTETSCIISAI-DKGDNLSGHVGSPNPAC 472 (666)
Q Consensus 396 ~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~--~~v~~~YG~TE~~~~~~~~-~~~~~~~~~vG~p~~~~ 472 (666)
.++ .++||.+++||+++++++.+++.+.++ ..+.+.||+||+++..... +......+++|.|.+|+
T Consensus 380 ~~~-----------l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~ 448 (652)
T TIGR01217 380 THD-----------LSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPTLPVHIGEIQAPGLGT 448 (652)
T ss_pred cCC-----------hhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCCCCcCCccCCCcCCC
Confidence 000 148999999999999999999988775 4567899999975433322 22224568899999999
Q ss_pred EEEEEecCCCCCCCCCCCCCccEEEEeCC--CcCccccCChhhhh--hc-cC-CCCeeecccEEEEecCCcEEEEccCCC
Q 005991 473 EIKLVDVPEMNYTSEDQPHPRGEICVRGP--IVFQGYYKNEVQTR--EV-ID-GDGWLHTGDIGLWLPGGRLKIIDRKKN 546 (666)
Q Consensus 473 ~v~ivd~~~~~~~~~~~~~~~GEl~v~g~--~v~~GY~~~~~~t~--~~-~~-~~gw~~TGDlg~~~~dG~l~i~GR~~d 546 (666)
+++|+| ++++.+ .+ +.|||+++|| +++.|||++++.|+ +. |. .+|||+|||+|++|+||+|+|+||+||
T Consensus 449 ~v~ivd-~~g~~~-~g---~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd 523 (652)
T TIGR01217 449 AVQSWD-PEGKPV-TG---EVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDS 523 (652)
T ss_pred ceEEEC-CCCCCC-CC---CccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccC
Confidence 999999 555544 33 5899999996 68999999998765 22 32 378999999999999999999999999
Q ss_pred eEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh---------hHHHHHHHHcCCCcccccccc
Q 005991 547 IFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP---------DVLKDWAASQGIKVIYCFSFR 614 (666)
Q Consensus 547 ~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~---------~~l~~~~~~~~l~~~~~~~~~ 614 (666)
+||+ +|+||+|.|||++|.+||+|.+|+|+|.+++ +.++|+|++.+ ++++++++++ |+ .++
T Consensus 524 ~I~~-~G~ri~p~EIE~~l~~~p~V~eaavvg~~~~~~ge~~~afVv~~~~~~~~~~~~~~l~~~~~~~-l~-----~~~ 596 (652)
T TIGR01217 524 TLNP-QGVRMGSAEIYNAVERLDEVRESLCIGQEQPDGGYRVVLFVHLAPGATLDDALLDRIKRTIRAG-LS-----PRH 596 (652)
T ss_pred eEec-CCEEcCHHHHHHHHHhCCCcceEEEEeeecCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHhh-CC-----CCc
Confidence 9996 8999999999999999999999999998754 68999999742 3688889887 88 999
Q ss_pred cCcchhHHH-HHHHHhhhhhhhhhccch
Q 005991 615 ANSHVIFIA-LIHNLCQLYSSKELFRSR 641 (666)
Q Consensus 615 ~p~~i~~v~-~~~~~~gK~~r~~l~~~~ 641 (666)
+|+.|.+++ +|+|.+||++|+.|++.-
T Consensus 597 ~P~~i~~v~~lP~T~sGKi~r~~Lr~~~ 624 (652)
T TIGR01217 597 VPDEIIEVPGIPHTLTGKRVEVAVKRVL 624 (652)
T ss_pred CCCEEEECCCCCCCCCccChHHHHHHHH
Confidence 999999995 888999999999998763
No 39
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.3e-67 Score=596.14 Aligned_cols=499 Identities=17% Similarity=0.195 Sum_probs=395.6
Q ss_pred CHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHH
Q 005991 80 TLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACS 159 (666)
Q Consensus 80 tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~ 159 (666)
|+.+.+.++ .+|+++|+++. +. .++.+.+||+||.+++.++|++|.++|+++||+|+|+++|++++++++|||+
T Consensus 87 n~~~~~~~~--~~~~~~Al~~~---~~-~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~ 160 (655)
T PRK03584 87 NYAENLLRH--RRDDRPAIIFR---GE-DGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATA 160 (655)
T ss_pred eHHHHhhcc--CCCCCeEEEEE---CC-CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 444444332 58999999875 32 2446789999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEecCCCCCHHHHHHHHHhcCceEEEEcccc---------HHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCC
Q 005991 160 AYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT---------LNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSG 230 (666)
Q Consensus 160 ~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~ 230 (666)
++|++++|+++.++.+++.+++++++++++|+++.. .+.+.+....++.++.++.++....... ....
T Consensus 161 ~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~ 237 (655)
T PRK03584 161 SLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAAA---AAAL 237 (655)
T ss_pred HcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCccc---cccc
Confidence 999999999999999999999999999999998643 2344444555666666666653221000 0011
Q ss_pred cEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHH-HHhhcccccccCCCcEEEEcCChHHH
Q 005991 231 VKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLIS-NVAGFSLMVQFYPSDIYMSYLPLAHI 309 (666)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~-~~~~~~~~~~~~~~d~~l~~~pl~h~ 309 (666)
.....|+++...............++++++|+|||||||.||||++||++++. .+......+++.++|+++++.++.|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 317 (655)
T PRK03584 238 PGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWM 317 (655)
T ss_pred CCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHH
Confidence 12345777665222222223345679999999999999999999999998754 34555556788999999999999987
Q ss_pred HHHHHHHHHHHhCcEEEEec-----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 005991 310 YERANQIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKK 384 (666)
Q Consensus 310 ~~~~~~~~~l~~G~~~~~~~-----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~ 384 (666)
... ..+.+|+.|+++++++ .++..+++.++++++|++.++|+++..+.....
T Consensus 318 ~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~---------------------- 374 (655)
T PRK03584 318 MWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGL---------------------- 374 (655)
T ss_pred hHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCC----------------------
Confidence 543 4567899999999975 378999999999999999999999987754200
Q ss_pred HHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh--CCccccCcccchhhhhhhccC-CCCCC
Q 005991 385 QAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF--GCQVMEGYGMTETSCIISAID-KGDNL 461 (666)
Q Consensus 385 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~--~~~v~~~YG~TE~~~~~~~~~-~~~~~ 461 (666)
.+...++ .+++|.+++||+++++++.+++.+.+ ++.+.+.||+||+++...... .....
T Consensus 375 -------~~~~~~~-----------l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~ 436 (655)
T PRK03584 375 -------VPGETHD-----------LSALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLLPVY 436 (655)
T ss_pred -------CccccCC-----------hhheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCCCcC
Confidence 0000000 14899999999999999999999887 478999999999865433222 22345
Q ss_pred CCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCC--CcCccccCChhhhh--hc-c-CCCCeeecccEEEEecC
Q 005991 462 SGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGP--IVFQGYYKNEVQTR--EV-I-DGDGWLHTGDIGLWLPG 535 (666)
Q Consensus 462 ~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~--~v~~GY~~~~~~t~--~~-~-~~~gw~~TGDlg~~~~d 535 (666)
.+++|.|.+|++++|+| +++..+ .+ +.|||+|+|+ +++.|||++++.++ +. | ..+|||+|||+|++|+|
T Consensus 437 ~g~~g~p~~g~~~~ivd-~~g~~~-~g---~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~d 511 (655)
T PRK03584 437 RGEIQCRGLGMAVEAWD-EDGRPV-VG---EVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEH 511 (655)
T ss_pred CCccCCCcCCceeEEEC-CCCCCC-CC---CceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCC
Confidence 68899999999999999 555554 34 4899999996 79999999998654 22 2 12689999999999999
Q ss_pred CcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh---------hHHHHHHHHc
Q 005991 536 GRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP---------DVLKDWAASQ 603 (666)
Q Consensus 536 G~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~---------~~l~~~~~~~ 603 (666)
|+|+|+||+||+||+ +|++|+|.|||++|.+||.|.+|+|+|.+++ +.++|+|++.+ ++++++++++
T Consensus 512 G~l~i~GR~dd~Ik~-~G~rI~p~EIE~~l~~~p~V~ea~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~ 590 (655)
T PRK03584 512 GGVVIYGRSDATLNR-GGVRIGTAEIYRQVEALPEVLDSLVIGQEWPDGDVRMPLFVVLAEGVTLDDALRARIRTTIRTN 590 (655)
T ss_pred CeEEEEeeccCeeec-CcEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCEEEEEEEEECCCCCCcHHHHHHHHHHHHhh
Confidence 999999999999997 8999999999999999999999999997753 68899998642 4688889988
Q ss_pred CCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 604 GIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 604 ~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
|+ .+++|..|++++ +|++.+||+.|++|++.
T Consensus 591 -L~-----~~~~P~~i~~v~~lP~t~sGKi~r~~lr~~ 622 (655)
T PRK03584 591 -LS-----PRHVPDKIIAVPDIPRTLSGKKVELPVKKL 622 (655)
T ss_pred -CC-----CCcCCCEEEECCCCCCCCCccchHHHHHHH
Confidence 88 999999999995 88888999999999876
No 40
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.1e-67 Score=689.77 Aligned_cols=525 Identities=18% Similarity=0.222 Sum_probs=432.9
Q ss_pred hHHHhhHHHHhhccccCCcCCCccccCCCCccccccCCCceEEcCCCCCCCcCccccCCCCCCcccccCCCCCCCCCHHH
Q 005991 4 SSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHD 83 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~ 83 (666)
..++++|.++|++++++|+.+++++++..+... ..+...+... ..+.+...++++
T Consensus 1524 ~~l~~~~~~lL~~l~~~p~~~~~~l~~~~~~~~-------------------~~~~~~~~~~------~~~~~~~~~~~~ 1578 (3956)
T PRK12467 1524 ERLAGHWLNLLQGLVADPERRLGELDLLDEAER-------------------RQILEGWNAT------HTGYPLARLVHQ 1578 (3956)
T ss_pred HHHHHHHHHHHHHHhhCccCceeeccccchHHh-------------------hhhHHhhcCC------ccCCCccccHHH
Confidence 468899999999999999999999998765421 0010001000 111233468999
Q ss_pred HHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCC
Q 005991 84 NFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSY 163 (666)
Q Consensus 84 ~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~ 163 (666)
+|+++++++||++|+.+. + +.+||+||+++++++|++|.+.|+++|++|+++++|++++++++|||+++|+
T Consensus 1579 ~~~~~a~~~p~~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~lavlkaG~ 1649 (3956)
T PRK12467 1579 LIEDQAAATPEAVALVFG---E------QELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLLAILKAGG 1649 (3956)
T ss_pred HHHHHHHhCCCCeEEEeC---C------cEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHHhhccCc
Confidence 999999999999999764 3 3599999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcC
Q 005991 164 ISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQG 243 (666)
Q Consensus 164 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (666)
++|||++.++.+++.++++++++++++++......+. .....+ ++.++... +....
T Consensus 1650 ~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~----~~~~~~-~~~~~~~~------------------~~~~~- 1705 (3956)
T PRK12467 1650 AYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLP----LPDGLR-SLVLDQED------------------DWLEG- 1705 (3956)
T ss_pred eeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCc----cccCCc-EEEecccc------------------chhcc-
Confidence 9999999999999999999999999999876543321 111122 22222211 00000
Q ss_pred CCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHHHhCc
Q 005991 244 CSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGV 323 (666)
Q Consensus 244 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~ 323 (666)
.....+.....+++++||+|||||||.||||+++|+++.+.+.+....++++++|+++++.|++|++++..++.+|..|+
T Consensus 1706 ~~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~ 1785 (3956)
T PRK12467 1706 YSDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSAADVVLQFTSFAFDVSVWELFWPLINGA 1785 (3956)
T ss_pred CCCCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcCCCcccEEEEecCccHHHHHHHHHHHHhCCC
Confidence 01112223457899999999999999999999999999999988888889999999999999999999988999999999
Q ss_pred EEEEec----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhH
Q 005991 324 AVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDR 399 (666)
Q Consensus 324 ~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~ 399 (666)
++++.+ .++..+++.|+++++|++.++|+++..|..... ..
T Consensus 1786 ~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~---------------------------------- 1830 (3956)
T PRK12467 1786 RLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-QV---------------------------------- 1830 (3956)
T ss_pred EEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-cc----------------------------------
Confidence 999976 478999999999999999999999998865200 00
Q ss_pred HhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCCC-----CCCCCCccCCccCcE
Q 005991 400 LVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKG-----DNLSGHVGSPNPACE 473 (666)
Q Consensus 400 ~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~-----~~~~~~vG~p~~~~~ 473 (666)
...+++|.+++||+++++++.+.|.+.+ ++.++|.||+||+++.++..... .....++|+|++|++
T Consensus 1831 --------~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~ 1902 (3956)
T PRK12467 1831 --------EHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLS 1902 (3956)
T ss_pred --------ccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCE
Confidence 0014799999999999999999888766 57899999999998766644322 123568999999999
Q ss_pred EEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccC-------CCCeeecccEEEEecCCcEEEEccCCC
Q 005991 474 IKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVID-------GDGWLHTGDIGLWLPGGRLKIIDRKKN 546 (666)
Q Consensus 474 v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~-------~~gw~~TGDlg~~~~dG~l~i~GR~~d 546 (666)
++|+| ++++.++.|. .|||+|+|+++++||+++|+.|+++|. +++||+|||+|++++||.|+|+||+||
T Consensus 1903 ~~vld-~~~~~vp~G~---~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~ 1978 (3956)
T PRK12467 1903 TYILD-ASLNPVPIGV---AGELYLGGVGLARGYLNRPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDH 1978 (3956)
T ss_pred EEEEC-CCCCCCCCCC---ceEEEeccccccccccCChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCc
Confidence 99999 6677777665 899999999999999999999999983 346999999999999999999999999
Q ss_pred eEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCC--CCeEEEEEEcCh--------------hHHHHHHHHcCCCcccc
Q 005991 547 IFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF--NSCLVAIVAVDP--------------DVLKDWAASQGIKVIYC 610 (666)
Q Consensus 547 ~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~--~~~~va~vv~~~--------------~~l~~~~~~~~l~~~~~ 610 (666)
+||+ +|++|+|.|||++|.+||+|.+|+|++.+. .+.++|+|++.. ++++++++++ |+
T Consensus 1979 qVki-~G~rIel~eIE~~l~~~p~V~~a~vv~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~l~~~l~~~-Lp---- 2052 (3956)
T PRK12467 1979 QVKI-RGFRIELGEIEARLREQGGVREAVVIAQDGANGKQLVAYVVPTDPGLVDDDEAQVALRAILKNHLKAS-LP---- 2052 (3956)
T ss_pred eEEe-CeEEechHHHHHHHHhCCCcceEEEEEecCCCCcEEEEEEEecCcccccccccccccHHHHHHHHHhh-Cc----
Confidence 9998 899999999999999999999999998753 468999998742 3688999988 88
Q ss_pred cccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 611 FSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 611 ~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
.|++|..+++++ +|.+.+||++|++|.+.
T Consensus 2053 -~ymvP~~~~~l~~lP~t~~GKidr~~L~~~ 2082 (3956)
T PRK12467 2053 -EYMVPAHLVFLARMPLTPNGKLDRKALPAP 2082 (3956)
T ss_pred -hhhCchhhhhhhcCCCCCCCCcchhhCCCC
Confidence 999999999996 88888899999999875
No 41
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=1.5e-66 Score=579.38 Aligned_cols=491 Identities=21% Similarity=0.283 Sum_probs=404.6
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
.++.++|.+.++.+|+++|+... +...+..+.+||+||+++++++|.+|.+.|+++|++|+++++|+++|+++++||
T Consensus 22 ~~~~~~~~~~~~~~p~~~a~~~~---~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~ 98 (538)
T TIGR03208 22 RTINDHFDAAVANCPDKPALTAY---RDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLAC 98 (538)
T ss_pred CcHHHHHHHHHHHCCCceEEEee---cccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 58999999999999999999763 211223467999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccH-----HHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEE
Q 005991 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTL-----NTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKL 233 (666)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~ 233 (666)
+++|++++|+++.++.+++.++++++++++++++.... ..+.+....++..+.++..+....
T Consensus 99 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 165 (538)
T TIGR03208 99 ARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDGD------------- 165 (538)
T ss_pred HhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCCC-------------
Confidence 99999999999999999999999999999999987542 223333334555666666543210
Q ss_pred EehHHHHhcCCCCC-------CCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCCh
Q 005991 234 ISYLQLQSQGCSSP-------QPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPL 306 (666)
Q Consensus 234 ~~~~~~~~~~~~~~-------~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl 306 (666)
..++.++....... .......++++++|+|||||||.||||+++|+++...+......+++..+|++++++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl 245 (538)
T TIGR03208 166 DSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASPM 245 (538)
T ss_pred cCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCCc
Confidence 12333222111000 01123467999999999999999999999999999988877777888899999999999
Q ss_pred HHHHHHHH-HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 005991 307 AHIYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKK 384 (666)
Q Consensus 307 ~h~~~~~~-~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~ 384 (666)
+|.+++.. .+.+++.|+++++.+ .++..+++.++++++|++.++|.++..+........
T Consensus 246 ~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~------------------- 306 (538)
T TIGR03208 246 AHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESG------------------- 306 (538)
T ss_pred hhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccC-------------------
Confidence 99998765 667899999998877 799999999999999999999999988765311000
Q ss_pred HHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCC--CCC
Q 005991 385 QAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD--NLS 462 (666)
Q Consensus 385 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~--~~~ 462 (666)
...+++|.+++||+++++++.+++.+.+|+++++.||+||++.+++...... ...
T Consensus 307 -----------------------~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~ 363 (538)
T TIGR03208 307 -----------------------APVPSLFTFLCAGAPIPGILVERAWELLGALIVSAWGMTENGAVTVTEPDDALEKAS 363 (538)
T ss_pred -----------------------CCCCcceEEEEcCCCCCHHHHHHHHHHcCCeEEeeeccCcCCCccccCcccchhhcc
Confidence 0014799999999999999999998888999999999999987665443222 224
Q ss_pred CCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEc
Q 005991 463 GHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIID 542 (666)
Q Consensus 463 ~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~G 542 (666)
.++|+|+++++++|+| +++..++.++ .|||+|+|++++.||+++|+.|+ ++.+|||+|||+|+++++|.|+++|
T Consensus 364 ~~~G~~~~g~~v~i~~-~~~~~~~~g~---~Gel~v~g~~~~~gy~~~~~~~~--~~~~~~~~TGD~~~~~~~g~l~~~g 437 (538)
T TIGR03208 364 TTDGRPLPGVEVKVID-ANGAKLSQGE---TGRLLVRGCSNFGGYLKRPHLNS--TDAEGWFDTGDLAFQDAEGYIRING 437 (538)
T ss_pred CcccccCCCCEEEEEC-CCCCCCcCCC---CcEEEEecCcccccccCCccccc--ccCCCceeccceEEECCCCcEEEEe
Confidence 6799999999999999 5556565554 89999999999999999999875 3578999999999999999999999
Q ss_pred cCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCccccccc
Q 005991 543 RKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSF 613 (666)
Q Consensus 543 R~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~ 613 (666)
|.||+||+ +|++|+|.+||+++.+||+|.+++|++.++. +.++|+|++. .+++.++++++.++ .+
T Consensus 438 R~~~~i~~-~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~~l~-----~~ 511 (538)
T TIGR03208 438 RSKDVIIR-GGENIPVVEIENLLYQHPAVAQVAIVAYPDERLGERACAVVVPKPGCTLDFAAMVAFLKAQKVA-----LQ 511 (538)
T ss_pred ccCceEEE-CCEEECHHHHHHHHhcCcceeeEEEEeccCCCCCceEEEEEEECCCCCCCHHHHHHHHHhcchh-----hc
Confidence 99999996 8999999999999999999999999997654 5788998863 46788999864477 89
Q ss_pred ccCcchhHHH-HHHHHhhhhhhhhhcc
Q 005991 614 RANSHVIFIA-LIHNLCQLYSSKELFR 639 (666)
Q Consensus 614 ~~p~~i~~v~-~~~~~~gK~~r~~l~~ 639 (666)
++|+.+.+++ +|.+.+||++|++|++
T Consensus 512 ~~P~~i~~v~~iP~t~~gKv~r~~L~~ 538 (538)
T TIGR03208 512 YIPERLEVVDALPATPAGKIQKFRLRE 538 (538)
T ss_pred cCCcEEEEeccCCCCCccccchHhhcC
Confidence 9999999995 8888889999999863
No 42
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-67 Score=604.42 Aligned_cols=465 Identities=19% Similarity=0.257 Sum_probs=385.9
Q ss_pred CCHHHHHHHHHHh--CCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 79 GTLHDNFIYAVEN--YPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 79 ~tl~~~~~~~a~~--~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
.|+.++|.+++++ +||++|+... ..+||+||+++++++|++|.+.|+++|++|+|+++|+++|+++++
T Consensus 4 ~~~~~~~~~~a~~~~~pd~~a~~~~----------~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 73 (705)
T PRK06060 4 GNLAGLLAEQASEAGWYDRPAFYAA----------DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLL 73 (705)
T ss_pred cCHHHHHHHHHhhccCCCceEEEec----------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 3788999998886 7999999642 149999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEeh
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (666)
||+++|++++|+++.++.+++.+++++++++++|++......+.. .. ++ ..
T Consensus 74 a~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~-------~~-~~---------------------~~ 124 (705)
T PRK06060 74 ACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQP-------SR-VA---------------------EA 124 (705)
T ss_pred HHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcc-------cc-cc---------------------hh
Confidence 999999999999999999999999999999999998654332211 00 00 00
Q ss_pred HHHHhcCC-CCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcc-cccccCCCcEEEEcCChHHHHHHHH
Q 005991 237 LQLQSQGC-SSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFS-LMVQFYPSDIYMSYLPLAHIYERAN 314 (666)
Q Consensus 237 ~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~-~~~~~~~~d~~l~~~pl~h~~~~~~ 314 (666)
.++..... ..+....+..++++++++|||||||.||||+++|+++.+.+.++. ..+++.++|++++.+|++|.+++..
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 204 (705)
T PRK06060 125 AELMSEAARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGN 204 (705)
T ss_pred hhhhhhccccCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhH
Confidence 11110000 001112234678999999999999999999999999988776553 3467889999999999999988754
Q ss_pred -HHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCC
Q 005991 315 -QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQ 391 (666)
Q Consensus 315 -~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~ 391 (666)
++.++..|+++++.+ .++..+.+.++++++|+++++|+++..+.+....
T Consensus 205 ~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~---------------------------- 256 (705)
T PRK06060 205 SVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSP---------------------------- 256 (705)
T ss_pred HHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhccc----------------------------
Confidence 667899999999876 6888889999999999999999999887652100
Q ss_pred CCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCCCCCCCCCccCCcc
Q 005991 392 TPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNP 470 (666)
Q Consensus 392 ~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~ 470 (666)
...+++|.+++||+++++++.+.+.+.+ ++++++.||+||++.++..........+++|+|++
T Consensus 257 ----------------~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~iG~p~~ 320 (705)
T PRK06060 257 ----------------DSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSNRVDEWRLGTLGRVLP 320 (705)
T ss_pred ----------------ccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEeccCCCCCcCcccccCC
Confidence 0003799999999999999999999888 58999999999998655443333445678999999
Q ss_pred CcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEc
Q 005991 471 ACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKL 550 (666)
Q Consensus 471 ~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl 550 (666)
+++++|+| ++++.++.+. .|||||+|++++.|||++|+.+. ..+|||+|||+|++++||+++|+||+||+||+
T Consensus 321 ~~~v~i~d-~~g~~~~~g~---~GEl~i~g~~v~~GY~~~~~~~~---~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~ 393 (705)
T PRK06060 321 PYEIRVVA-PDGTTAGPGV---EGDLWVRGPAIAKGYWNRPDSPV---ANEGWLDTRDRVCIDSDGWVTYRCRADDTEVI 393 (705)
T ss_pred CcEEEEEC-CCCCCCCCCC---ceEEEEccchhhhhhhCCCcccc---cCCCcEECCeeEEECCCceEEEecccCceEEE
Confidence 99999999 5556666554 89999999999999999998763 36899999999999999999999999999997
Q ss_pred CCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh---------hHHHHHHHHcCCCcccccccccCcc
Q 005991 551 AQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP---------DVLKDWAASQGIKVIYCFSFRANSH 618 (666)
Q Consensus 551 ~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~---------~~l~~~~~~~~l~~~~~~~~~~p~~ 618 (666)
+|++|+|.|||+++.+||+|.+|+|++.++. +.++|+|++.. .+++++++++ |+ .|++|..
T Consensus 394 -~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~i~~~l~~~-L~-----~~~~P~~ 466 (705)
T PRK06060 394 -GGVNVDPREVERLIIEDEAVAEAAVVAVRESTGASTLQAFLVATSGATIDGSVMRDLHRGLLNR-LS-----AFKVPHR 466 (705)
T ss_pred -CCEEECHHHHHHHHHhCCCeeEEEEEeecCccCCeeEEEEEEeccccCcChHHHHHHHHHHHHh-CC-----CCcCCcE
Confidence 8999999999999999999999999987654 57899998642 3677888888 88 9999999
Q ss_pred hhHHH-HHHHHhhhhhhhhhccc
Q 005991 619 VIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 619 i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
|.+++ +|++.+||++|++|++.
T Consensus 467 i~~v~~iP~t~~GKidr~~L~~~ 489 (705)
T PRK06060 467 FAVVDRLPRTPNGKLVRGALRKQ 489 (705)
T ss_pred EEEeecCCCCcchhhHHHHHHhh
Confidence 99995 88888899999999864
No 43
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=4.5e-67 Score=585.74 Aligned_cols=491 Identities=22% Similarity=0.306 Sum_probs=385.2
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCc----cCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGT----VGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIV 154 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~----~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~ 154 (666)
.|+.++|.+.++++||++|+++. ++. ...++++||+||.++++++|++|.+.|+++||+|+++++|+++|+++
T Consensus 6 ~~~~~~l~~~a~~~p~~~a~~~~---~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~ 82 (552)
T PRK09274 6 ANIARHLPRAAQERPDQLAVAVP---GGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFAL 82 (552)
T ss_pred hhHHHHHHHHHHhCCCcceEEec---cCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHH
Confidence 57889999999999999999864 321 12245799999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccc--cHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcE
Q 005991 155 DHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQ--TLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVK 232 (666)
Q Consensus 155 ~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~--~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~ 232 (666)
++||+++|++++|+++.++.+++.+++++++++++|+++. ....+... ..+..+.++.++.... ..
T Consensus 83 ~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~----------~~ 150 (552)
T PRK09274 83 TFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGW--GKPSVRRLVTVGGRLL----------WG 150 (552)
T ss_pred HHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhcc--Cccchhheeccccccc----------cC
Confidence 9999999999999999999999999999999999998752 12211111 1122333333322100 00
Q ss_pred EEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHH
Q 005991 233 LISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYER 312 (666)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~ 312 (666)
..+++++...............++++++|+|||||||.||||++||+++.+.+......+++.++|+.++.+|++|.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~- 229 (552)
T PRK09274 151 GTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFALFG- 229 (552)
T ss_pred CccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHhhh-
Confidence 1234444322111122223456789999999999999999999999999998887777788999999999999988654
Q ss_pred HHHHHHHHhCcEEEEec--------CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 005991 313 ANQIVSVYYGVAVGFYQ--------GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKK 384 (666)
Q Consensus 313 ~~~~~~l~~G~~~~~~~--------~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~ 384 (666)
+..|+++++.+ .++..+++.|+++++|+++++|+++..|.+......
T Consensus 230 ------~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~------------------- 284 (552)
T PRK09274 230 ------PALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANG------------------- 284 (552)
T ss_pred ------hhhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcC-------------------
Confidence 34577777653 478999999999999999999999998876321100
Q ss_pred HHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh--CCccccCcccchhhhhhhccCCC----
Q 005991 385 QAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF--GCQVMEGYGMTETSCIISAIDKG---- 458 (666)
Q Consensus 385 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~--~~~v~~~YG~TE~~~~~~~~~~~---- 458 (666)
...+++|.+++||+++++++.+++++.+ |+++++.||+||++++++.....
T Consensus 285 -----------------------~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~ 341 (552)
T PRK09274 285 -----------------------IKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREILFA 341 (552)
T ss_pred -----------------------CCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhhhcc
Confidence 0014799999999999999999999988 57999999999998755433211
Q ss_pred ------CCCCCCccCCccCcEEEEEecCC--------CCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhcc--CCCC
Q 005991 459 ------DNLSGHVGSPNPACEIKLVDVPE--------MNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVI--DGDG 522 (666)
Q Consensus 459 ------~~~~~~vG~p~~~~~v~ivd~~~--------~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~--~~~g 522 (666)
.....++|+|+|+++++|+|..+ +..++.+ +.|||+|+|+.++.|||++|+.|...| +.+|
T Consensus 342 ~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g---~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g 418 (552)
T PRK09274 342 TRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATG---EIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQG 418 (552)
T ss_pred ccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCC---CeeEEEEecCcccccccCChHHhhhhhcccCCC
Confidence 11234799999999999999432 3334444 489999999999999999999999876 4466
Q ss_pred --eeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC--CeEEEEEEcCh-----
Q 005991 523 --WLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN--SCLVAIVAVDP----- 593 (666)
Q Consensus 523 --w~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~--~~~va~vv~~~----- 593 (666)
||+|||+|++|+||+|+|+||.||+||+ +|++|+|.|||++|.+||+|.+|+|++.+++ +.++++|++.+
T Consensus 419 ~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~~~~~~~~v~~~~~~~~~ 497 (552)
T PRK09274 419 DVWHRMGDLGYLDAQGRLWFCGRKAHRVET-AGGTLYTIPCERIFNTHPGVKRSALVGVGVPGAQRPVLCVELEPGVACS 497 (552)
T ss_pred CcEEEcCCEEEEccCCcEEEEeccCCeEEE-CCEEECcHHHHHHHHhCcccceeEEEEeCCCCCceEEEEEEccCccccc
Confidence 9999999999999999999999999997 8999999999999999999999999987654 46888888643
Q ss_pred -hHHHHHHHHcCCCcccccccccCcchhHHH-HHHH--Hhhhhhhhhhccc
Q 005991 594 -DVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHN--LCQLYSSKELFRS 640 (666)
Q Consensus 594 -~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~--~~gK~~r~~l~~~ 640 (666)
+++.+++++. +... ..++.|+.+.+++ +|.+ .+||++|++|++.
T Consensus 498 ~~~l~~~l~~~-l~~~--~~~~~~~~~~~~~~lP~t~~~~GKi~r~~L~~~ 545 (552)
T PRK09274 498 KSALYQELRAL-AAAH--PHTAGIERFLIHPSFPVDIRHNAKIFREKLAVW 545 (552)
T ss_pred hHHHhhhhHHH-HHhc--CCCcceeEEeccCCCCccccccccccHHHHHHH
Confidence 3466666665 4411 2456778888886 7777 5799999999764
No 44
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.7e-67 Score=604.37 Aligned_cols=483 Identities=23% Similarity=0.277 Sum_probs=387.2
Q ss_pred CCCCHHHHHHHHHHhCCC-CceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPD-YKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD 155 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd-~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~ 155 (666)
+..|+.++|.++++++|+ ++|+... +++++||+||.++++++|++|.+. +++||+|+++++|++||++++
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~--------~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~ 272 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDV--------NFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVI 272 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcC--------CCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHH
Confidence 457899999999999998 5777421 134699999999999999999987 599999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHH--HhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEE
Q 005991 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLL--SFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKL 233 (666)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~--~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~ 233 (666)
|||+++|++++|+++.++++++.+++++++++++|++.+..+... .....++.++.+ .+++....
T Consensus 273 lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~------------ 339 (718)
T PRK08043 273 FGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWV-YLEDLKDD------------ 339 (718)
T ss_pred HHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEE-Ehhhhhhh------------
Confidence 999999999999999999999999999999999999876543211 011112222222 22221000
Q ss_pred EehHHH----HhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHH
Q 005991 234 ISYLQL----QSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHI 309 (666)
Q Consensus 234 ~~~~~~----~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~ 309 (666)
..+.+. ...... ........++|+++++|||||||.||||++||+++.+.+......++++++|++++.+|++|.
T Consensus 340 ~~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~ 418 (718)
T PRK08043 340 VTTADKLWIFAHLLMP-RLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHS 418 (718)
T ss_pred cchhHHHHHHHHHhCC-ccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhh
Confidence 011110 000000 011123467999999999999999999999999999988877777788999999999999999
Q ss_pred HHHHH-HHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH
Q 005991 310 YERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQA 386 (666)
Q Consensus 310 ~~~~~-~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~ 386 (666)
+++.. ++.++..|+++++.+ .+...+.+.++++++|++.++|+++..+.+.. .
T Consensus 419 ~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~-----~------------------- 474 (718)
T PRK08043 419 FGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA-----N------------------- 474 (718)
T ss_pred hhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc-----C-------------------
Confidence 99876 668899999999876 46778889999999999999999887654310 0
Q ss_pred HHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCcc
Q 005991 387 IVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVG 466 (666)
Q Consensus 387 ~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG 466 (666)
+ ++ .+++|.+++||+++++++.+.|++.+|++++++||+||++..++...+.....+++|
T Consensus 475 ------~---~~-----------~~~lr~i~~gg~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~svG 534 (718)
T PRK08043 475 ------P---YD-----------FARLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVG 534 (718)
T ss_pred ------c---cc-----------ccceEEEEEeCccCCHHHHHHHHHHcCCCeecccCcccccceEEecCCcccCCCCCC
Confidence 0 00 048999999999999999999999899999999999999876665544445678999
Q ss_pred CCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccC--Chhh-------hhhccCCCCeeecccEEEEecCCc
Q 005991 467 SPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYK--NEVQ-------TREVIDGDGWLHTGDIGLWLPGGR 537 (666)
Q Consensus 467 ~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~--~~~~-------t~~~~~~~gw~~TGDlg~~~~dG~ 537 (666)
+|+||++++|+|.++ .+ +.|||+++|++++.|||+ +++. +.+.+..+|||+|||+|++|+||+
T Consensus 535 ~p~pg~~~~i~d~~~-----~~---~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~ 606 (718)
T PRK08043 535 RILPGMDARLLSVPG-----IE---QGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGF 606 (718)
T ss_pred CcCCCCeeEEecCCC-----CC---CceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCc
Confidence 999999999998432 12 369999999999999998 4553 233334689999999999999999
Q ss_pred EEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc---ChhHHHHHHHHcCCCccccc
Q 005991 538 LKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV---DPDVLKDWAASQGIKVIYCF 611 (666)
Q Consensus 538 l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~---~~~~l~~~~~~~~l~~~~~~ 611 (666)
++|+||+||+||+ +|++|+|.|||+++.+|+.+.+++|++.+++ +.++++++. +.+++++++++++++
T Consensus 607 l~i~GR~~d~I~~-~G~~V~p~eIE~~l~~~~~~~~~avv~~~~~~~ge~~v~~~~~~~~~~~~l~~~~~~~~l~----- 680 (718)
T PRK08043 607 VQIQGRAKRFAKI-AGEMVSLEMVEQLALGVSPDKQHATAIKSDASKGEALVLFTTDSELTREKLQQYAREHGVP----- 680 (718)
T ss_pred EEEEecCCCeeEe-CcEEcCHHHHHHHHHhCCccceEEEEEccCCCCCceEEEEEcCcccCHHHHHHHHHhcCCC-----
Confidence 9999999999997 7999999999999999998888888886654 567777653 457899999987688
Q ss_pred ccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 612 SFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 612 ~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
.|++|+.+.+++ +|++.+||++|++|++.
T Consensus 681 ~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~ 710 (718)
T PRK08043 681 ELAVPRDIRYLKQLPLLGSGKPDFVTLKSM 710 (718)
T ss_pred cccCCceEEEecccCcCCCCCcCHHHHHHH
Confidence 999999999995 88888899999999764
No 45
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.6e-67 Score=645.27 Aligned_cols=522 Identities=17% Similarity=0.185 Sum_probs=428.2
Q ss_pred hHHHhhHHHHhhccccCCcCCCccccCCCCccccccCCCceEEcCCCCCCCcCccccCCCCCCcccccCCCCCCCCCHHH
Q 005991 4 SSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHD 83 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~ 83 (666)
..++++|..++++++.+|+.++++++|...... . + +. ..... ..+. +..++.+
T Consensus 410 ~~l~~~~~~ll~~~~~~p~~~i~~~~~~~~~~~--~---~---~~------------~~~~~------~~~~-~~~~l~~ 462 (1296)
T PRK10252 410 IAHAERLKALIAQFAADPALLCGDVDILLPGEY--A---Q---LA------------QVNAT------AVEI-PETTLSA 462 (1296)
T ss_pred HHHHHHHHHHHHHHHhCCCCChhhcCCCCHHHH--H---H---HH------------HhcCC------CCCC-CcCCHHH
Confidence 457789999999999999999999987654411 0 0 00 00000 0011 2368999
Q ss_pred HHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCC
Q 005991 84 NFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSY 163 (666)
Q Consensus 84 ~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~ 163 (666)
+|.++++++||++|+.+. + +.+||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 463 ~~~~~~~~~p~~~Al~~~---~------~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~ 533 (1296)
T PRK10252 463 LVAQQAAKTPDAPALADA---R------YQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGA 533 (1296)
T ss_pred HHHHHHHhCCCCeEEEcC---C------CcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCC
Confidence 999999999999999764 3 3499999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcC
Q 005991 164 ISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQG 243 (666)
Q Consensus 164 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (666)
+++|+++.++.+++.++++++++++++++......+.. .+.+.. + .+.......
T Consensus 534 ~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~----~~~~~~-~---------------------~~~~~~~~~ 587 (1296)
T PRK10252 534 AWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFAD----VPDLTS-L---------------------CYNAPLAPQ 587 (1296)
T ss_pred EEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhccc----CCCcee-e---------------------ecccccccc
Confidence 99999999999999999999999999998765443321 111111 1 111110000
Q ss_pred CCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHHHhCc
Q 005991 244 CSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGV 323 (666)
Q Consensus 244 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~ 323 (666)
. ..+.....++++++|+|||||||.||||+++|+++.+.+.+....+++.++|++++.+|++|+.++..++.+|+.|+
T Consensus 588 ~--~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~ 665 (1296)
T PRK10252 588 G--AAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGA 665 (1296)
T ss_pred c--CCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCC
Confidence 0 11122336789999999999999999999999999999998888899999999999999999999988999999999
Q ss_pred EEEEec----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhH
Q 005991 324 AVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDR 399 (666)
Q Consensus 324 ~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~ 399 (666)
++++.+ .++..+.+.++++++|++.++|+++..+.........
T Consensus 666 ~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~--------------------------------- 712 (1296)
T PRK10252 666 KLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGA--------------------------------- 712 (1296)
T ss_pred EEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccc---------------------------------
Confidence 999976 5899999999999999999999999887653111000
Q ss_pred HhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC-------CCCCCCccCCccCc
Q 005991 400 LVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-------DNLSGHVGSPNPAC 472 (666)
Q Consensus 400 ~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~-------~~~~~~vG~p~~~~ 472 (666)
.....++|.+++||+++++++.+.|.+.++++++|.||+||++..++..... .....++|+|++++
T Consensus 713 -------~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 785 (1296)
T PRK10252 713 -------RQSCASLRQVFCSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNT 785 (1296)
T ss_pred -------cccCCCccEEEEecCCCCHHHHHHHHhcCCCEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCC
Confidence 0001479999999999999999999988899999999999998766654322 12346799999999
Q ss_pred EEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCC------CCeeecccEEEEecCCcEEEEccCCC
Q 005991 473 EIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDG------DGWLHTGDIGLWLPGGRLKIIDRKKN 546 (666)
Q Consensus 473 ~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~------~gw~~TGDlg~~~~dG~l~i~GR~~d 546 (666)
+++|+| ++++.++.|. .|||+|+|+++++||+++|+.|+++|.. ++||+|||+|++++||.|+|+||+||
T Consensus 786 ~~~i~d-~~~~~~~~g~---~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~ 861 (1296)
T PRK10252 786 GLRILD-ARMRPVPPGV---AGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDD 861 (1296)
T ss_pred EEEEEC-CCCCCCCCCC---ceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCC
Confidence 999999 6677777665 8999999999999999999999999843 45999999999999999999999999
Q ss_pred eEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeC---------CCCeEEEEEEcC------hhHHHHHHHHcCCCccccc
Q 005991 547 IFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDS---------FNSCLVAIVAVD------PDVLKDWAASQGIKVIYCF 611 (666)
Q Consensus 547 ~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~---------~~~~~va~vv~~------~~~l~~~~~~~~l~~~~~~ 611 (666)
+||+ +|++|+|.|||++|.+||+|.+|+|++.. ....++|+|++. .++++++++++ |+
T Consensus 862 ~ik~-~G~ri~~~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~~~~~~l~~~l~~~-Lp----- 934 (1296)
T PRK10252 862 QLKI-RGQRIELGEIDRAMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLPLDTSALQAQLRER-LP----- 934 (1296)
T ss_pred eEEE-eeEEecHHHHHHHHHhCccccceEEEEEeccccccCCCCccEEEEEEEcCCCCCCCHHHHHHHHHhh-Cc-----
Confidence 9998 89999999999999999999999876531 124799999863 47899999998 98
Q ss_pred ccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 612 SFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 612 ~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
.|++|..+++++ +|.+.+||++|++|++.
T Consensus 935 ~~~~P~~~~~~~~lP~t~~GKidr~~L~~~ 964 (1296)
T PRK10252 935 PHMVPVVLLQLDQLPLSANGKLDRKALPLP 964 (1296)
T ss_pred hhcCCcEEEEecCCCCCCCcChhHHhcCCC
Confidence 999999999885 88888899999999875
No 46
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=7.8e-68 Score=697.10 Aligned_cols=526 Identities=17% Similarity=0.202 Sum_probs=434.9
Q ss_pred hHHHhhHHHHhhccccCCcCCCccccCCCCccccccCCCceEEcCCCCCCCcCccccCCCCCCcccccCCCCCCCCCHHH
Q 005991 4 SSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHD 83 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~ 83 (666)
..+.++|.++|.+|+++|+.+++++++..+..... +...+.. ...+.+...++++
T Consensus 3670 ~~l~~~f~~~L~~l~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~------~~~~~~~~~~~~~ 3724 (4334)
T PRK05691 3670 ERLLGEFKRLLLALVQGFHGDLSELPLLGEQERDF-------------------LLDGCNR------SERDYPLEQSYVR 3724 (4334)
T ss_pred HHHHHHHHHHHHHHHhCcCCChhhcCCCCHHHHHH-------------------HHHhhCC------ccCCCccccCHHH
Confidence 46889999999999999999999999776442100 0000000 0011234569999
Q ss_pred HHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCC
Q 005991 84 NFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSY 163 (666)
Q Consensus 84 ~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~ 163 (666)
+|+++++++||++|+.+. ++. +||+||+++++++|+.|.++|+++|++|+|++++++++++++|||+++|+
T Consensus 3725 ~~~~~~~~~p~~~Av~~~---~~~------~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~ 3795 (4334)
T PRK05691 3725 LFEAQVAAHPQRIAASCL---DQQ------WSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGA 3795 (4334)
T ss_pred HHHHHHHhCCCceEEEcC---CCc------ccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCc
Confidence 999999999999999875 544 99999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCc--eEEEEeCCCCCCCCCCCCCCCcEEEehHHHHh
Q 005991 164 ISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSV--HLIVVVGGKDEHLPSLPSTSGVKLISYLQLQS 241 (666)
Q Consensus 164 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l--~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (666)
++|||++.+|.+++.++++++++++++++.............+... ..++..+. ...
T Consensus 3796 a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~ 3854 (4334)
T PRK05691 3796 GYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEE---------------------VQA 3854 (4334)
T ss_pred EEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeecc---------------------ccc
Confidence 9999999999999999999999999999987655443333222211 11222111 100
Q ss_pred cCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHHHh
Q 005991 242 QGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYY 321 (666)
Q Consensus 242 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~ 321 (666)
.......+.....|+++|||+|||||||.||||+++|+++.+.+.+....++++++|+++.+.|++|+.++..++.++..
T Consensus 3855 ~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~~~~~~l~~ 3934 (4334)
T PRK05691 3855 GEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVWQFLAAPLF 3934 (4334)
T ss_pred ccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHHHHHHHHhC
Confidence 11111122234578999999999999999999999999999999888888999999999999999999999999999999
Q ss_pred CcEEEEec----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhh
Q 005991 322 GVAVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMW 397 (666)
Q Consensus 322 G~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~ 397 (666)
|+++++++ .++..+.+.++++++|++.++|+++..+......
T Consensus 3935 G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~~---------------------------------- 3980 (4334)
T PRK05691 3935 GARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAEDRQ---------------------------------- 3980 (4334)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhccc----------------------------------
Confidence 99999886 4789999999999999999999999887642100
Q ss_pred hHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCCCC----CCCCCccCCccCc
Q 005991 398 DRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGD----NLSGHVGSPNPAC 472 (666)
Q Consensus 398 d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~----~~~~~vG~p~~~~ 472 (666)
..++||.+++||+++++++.+.|.+.+ +++++|.||+||++..++...... ....++|+|++|+
T Consensus 3981 -----------~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~ 4049 (4334)
T PRK05691 3981 -----------ALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNN 4049 (4334)
T ss_pred -----------cCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCC
Confidence 004799999999999999999987764 789999999999998766443222 2335799999999
Q ss_pred EEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccC-------CCCeeecccEEEEecCCcEEEEccCC
Q 005991 473 EIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVID-------GDGWLHTGDIGLWLPGGRLKIIDRKK 545 (666)
Q Consensus 473 ~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~-------~~gw~~TGDlg~~~~dG~l~i~GR~~ 545 (666)
+++|+| +.++.++.|. .|||||+|+++++||+|+|+.|+++|. +++||||||+|++++||.|+|+||+|
T Consensus 4050 ~~~v~d-~~~~~~p~g~---~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d 4125 (4334)
T PRK05691 4050 RLYLLD-EALELVPLGA---VGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRID 4125 (4334)
T ss_pred EEEEEC-CCCCCCCCCC---ceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccC
Confidence 999999 6667777665 899999999999999999999999993 45799999999999999999999999
Q ss_pred CeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeC--CCCeEEEEEEcCh---------hHHHHHHHHcCCCcccccccc
Q 005991 546 NIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDS--FNSCLVAIVAVDP---------DVLKDWAASQGIKVIYCFSFR 614 (666)
Q Consensus 546 d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~--~~~~~va~vv~~~---------~~l~~~~~~~~l~~~~~~~~~ 614 (666)
++||+ +|+||++.|||++|.++|+|.+|+|+... ..+.++|+|++.. ++++++++++ || .||
T Consensus 4126 ~qvki-~G~riel~eIE~~l~~~~~v~~a~v~~~~~~~~~~l~a~~~~~~~~~~~~~~~~~l~~~l~~~-Lp-----~ym 4198 (4334)
T PRK05691 4126 HQVKI-RGYRIELGEIEARLHEQAEVREAAVAVQEGVNGKHLVGYLVPHQTVLAQGALLERIKQRLRAE-LP-----DYM 4198 (4334)
T ss_pred CcEEe-ceEEecHHHHHHHHHhCCCccEEEEEEecCCCCcEEEEEEeCCcccccchHHHHHHHHHHHhh-CC-----hhh
Confidence 99998 89999999999999999999999887533 3468999999732 4678888888 98 999
Q ss_pred cCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 615 ANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 615 ~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
+|..+++++ +|.+.+||+||++|.+.
T Consensus 4199 vP~~~~~~~~lP~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4199 VPLHWLWLDRLPLNANGKLDRKALPAL 4225 (4334)
T ss_pred cCcceeecccCCCCCCCcccHhhcCCC
Confidence 999998885 89999999999999876
No 47
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=1.6e-66 Score=578.60 Aligned_cols=489 Identities=21% Similarity=0.270 Sum_probs=406.6
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
...++.++|.+.++++||++|+++. + +.+||+||.+++.++|.+|.+.|+++|++|+++++|+++|+++++
T Consensus 19 ~~~~l~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~l 89 (542)
T PRK06155 19 SERTLPAMLARQAERYPDRPLLVFG---G------TRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFL 89 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEeC---C------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHH
Confidence 4578999999999999999999754 3 349999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEeh
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (666)
||+++|++++|+++.++.+++.++++++++++++++.+....+.+.....+.++.++.++...... ..... ..
T Consensus 90 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~ 162 (542)
T PRK06155 90 GCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVS----VPAGW---ST 162 (542)
T ss_pred HHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccc----ccccc---ch
Confidence 999999999999999999999999999999999999887766655444333455566655432100 00000 00
Q ss_pred HHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHH
Q 005991 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQI 316 (666)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~ 316 (666)
.++... ..........++++++|+|||||||.||||+++|+++..........+++.+++++++.+|++|.+++...+
T Consensus 163 ~~~~~~--~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~~~~ 240 (542)
T PRK06155 163 APLPPL--DAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALNAFF 240 (542)
T ss_pred hhhccc--CCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHHHHH
Confidence 111111 111122234678999999999999999999999999988777667778889999999999999999998888
Q ss_pred HHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCCh
Q 005991 317 VSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSK 395 (666)
Q Consensus 317 ~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~ 395 (666)
.+++.|+++++.+ .++..+++.|+++++|++.++|+++..|.+.....
T Consensus 241 ~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~------------------------------- 289 (542)
T PRK06155 241 QALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARE------------------------------- 289 (542)
T ss_pred HHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCcc-------------------------------
Confidence 9999999999887 78999999999999999999999988776521000
Q ss_pred hhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCccCcEEE
Q 005991 396 MWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIK 475 (666)
Q Consensus 396 ~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~ 475 (666)
....+++|.++.|| +++++.+.+++.+++++++.||+||++..+.... .....+++|.|.++++++
T Consensus 290 -----------~~~~~~l~~~~~g~--~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~-~~~~~~~vG~~~~~~~~~ 355 (542)
T PRK06155 290 -----------SDRAHRVRVALGPG--VPAALHAAFRERFGVDLLDGYGSTETNFVIAVTH-GSQRPGSMGRLAPGFEAR 355 (542)
T ss_pred -----------ccccCceEEEEEcC--CCHHHHHHHHHHcCCCEEeeecccccCccccCCC-CCCCCCCcCccCCCceEE
Confidence 00014788887666 5788889999889999999999999987665432 345678899999999999
Q ss_pred EEecCCCCCCCCCCCCCccEEEEeCC---CcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCC
Q 005991 476 LVDVPEMNYTSEDQPHPRGEICVRGP---IVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQ 552 (666)
Q Consensus 476 ivd~~~~~~~~~~~~~~~GEl~v~g~---~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~ 552 (666)
|+| ++++.++.+. .|||+++|+ +++.||+++++.|++.| .++||+|||+|++++||+++|+||.+|+||+ +
T Consensus 356 i~d-~~~~~~~~g~---~Gei~v~~~~~~~~~~GY~~~~~~~~~~~-~~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~-~ 429 (542)
T PRK06155 356 VVD-EHDQELPDGE---PGELLLRADEPFAFATGYFGMPEKTVEAW-RNLWFHTGDRVVRDADGWFRFVDRIKDAIRR-R 429 (542)
T ss_pred EEC-CCCCCCCCCC---ceEEEEecCCccccchhhcCCHHHHHHhh-cCCcEeccceEEEcCCceEEEEecCCCEEEe-C
Confidence 999 5566666665 899999998 69999999999999998 7999999999999999999999999999996 8
Q ss_pred eeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcchhHHH
Q 005991 553 GEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSHVIFIA 623 (666)
Q Consensus 553 G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~ 623 (666)
|++|+|.+||+++.+||+|.+|+|++.+++ +.++++++++ ..+++++++++ ++ .+++|..|.+++
T Consensus 430 G~~v~p~eIE~~l~~~~~V~~~~v~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-l~-----~~~~P~~i~~~~ 503 (542)
T PRK06155 430 GENISSFEVEQVLLSHPAVAAAAVFPVPSELGEDEVMAAVVLRDGTALEPVALVRHCEPR-LA-----YFAVPRYVEFVA 503 (542)
T ss_pred CEEECHHHHHHHHHhCCCeeEEEEEeecccccCceEEEEEEECCCCCCCHHHHHHHHHhh-Cc-----CccCCcEEEEec
Confidence 999999999999999999999999987753 5677888753 46789999998 88 999999999885
Q ss_pred -HHHHHhhhhhhhhhccc
Q 005991 624 -LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 624 -~~~~~~gK~~r~~l~~~ 640 (666)
+|++.+||++|++|++.
T Consensus 504 ~iP~t~~GKi~r~~l~~~ 521 (542)
T PRK06155 504 ALPKTENGKVQKFVLREQ 521 (542)
T ss_pred cCCCCcccceeHHHHHhh
Confidence 88888899999999775
No 48
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-66 Score=579.31 Aligned_cols=496 Identities=21% Similarity=0.285 Sum_probs=396.3
Q ss_pred CCCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHH
Q 005991 75 HPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIV 154 (666)
Q Consensus 75 ~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~ 154 (666)
.+...|+.++|.+.++++||++|+.+. ++ .+.+||+||.++++++|++|.+.|+++||+|+|+++|+++|+++
T Consensus 12 ~~~~~~l~~~l~~~a~~~p~~~ai~~~---~~----~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~ 84 (534)
T PRK05852 12 SDFGPRIADLVEVAATRLPEAPALVVT---AD----RIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVA 84 (534)
T ss_pred hhhcccHHHHHHHHHHhCCCCcEEEec---CC----CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHH
Confidence 456789999999999999999999764 22 24599999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEE
Q 005991 155 DHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLI 234 (666)
Q Consensus 155 ~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~ 234 (666)
++||+++|++++|+++.++.+++.++|++++++++|++........... .......+.+..... .. .+....
T Consensus 85 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~-----~~~~~~ 156 (534)
T PRK05852 85 LLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPT--TRWWPLTVNVGGDSG-PS-----GGTLSV 156 (534)
T ss_pred HHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhcccc--ccccceeeeeccccc-cc-----cccccc
Confidence 9999999999999999999999999999999999999764322111100 000111111111100 00 000000
Q ss_pred ehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHH
Q 005991 235 SYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN 314 (666)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~ 314 (666)
.+...... ..........++++++|+|||||||.||||+++|+++...+......+++..+|++++.+|++|.+++..
T Consensus 157 ~~~~~~~~--~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~ 234 (534)
T PRK05852 157 HLDAATEP--TPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIA 234 (534)
T ss_pred ccccccCC--CccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHH
Confidence 11110000 0001111223578899999999999999999999999998888777788899999999999999999877
Q ss_pred -HHHHHHhCcEEEEec---CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcC
Q 005991 315 -QIVSVYYGVAVGFYQ---GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSG 390 (666)
Q Consensus 315 -~~~~l~~G~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~ 390 (666)
++.+++.|+++++.. +++..+++.++++++|+++++|.++..|........
T Consensus 235 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~------------------------- 289 (534)
T PRK05852 235 ALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEP------------------------- 289 (534)
T ss_pred HHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhccccc-------------------------
Confidence 567788899888754 688899999999999999999999988866321100
Q ss_pred CCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC-----C---CCC
Q 005991 391 QTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-----D---NLS 462 (666)
Q Consensus 391 ~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~-----~---~~~ 462 (666)
.....+++|.+.+||+++++++.+.+.+.+++++++.||+||++..++..... . ...
T Consensus 290 ---------------~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~ 354 (534)
T PRK05852 290 ---------------SGRKPAALRFIRSCSAPLTAETAQALQTEFAAPVVCAFGMTEATHQVTTTQIEGIGQTENPVVST 354 (534)
T ss_pred ---------------ccccCCCeeEEEECCCCCCHHHHHHHHHHhCCChhhccCccccchhhhcCCccccccccCccccc
Confidence 00001489999999999999999999999999999999999998766643321 1 123
Q ss_pred CCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEc
Q 005991 463 GHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIID 542 (666)
Q Consensus 463 ~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~G 542 (666)
+..|. .++++++|+| ++++.++.++ .|||+|+|+.++.|||++++.|++.| .+|||+|||+|++|+||++++.|
T Consensus 355 g~~g~-~~g~~~~i~d-~~g~~~~~g~---~Gel~v~g~~v~~gY~~~~~~t~~~~-~~g~~~TGD~~~~d~dG~l~~~g 428 (534)
T PRK05852 355 GLVGR-STGAQIRIVG-SDGLPLPAGA---VGEVWLRGTTVVRGYLGDPTITAANF-TDGWLRTGDLGSLSAAGDLSIRG 428 (534)
T ss_pred ccCCC-CCCCeEEEEC-CCCCCCCCCC---ceEEEEecCcccchhcCCcccchhhh-cCCCcccCceEEEeCCCcEEEEe
Confidence 34444 7999999999 5566666655 89999999999999999999999998 68999999999999999999999
Q ss_pred cCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc------ChhHHHHHHHHcCCCccccccc
Q 005991 543 RKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV------DPDVLKDWAASQGIKVIYCFSF 613 (666)
Q Consensus 543 R~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~------~~~~l~~~~~~~~l~~~~~~~~ 613 (666)
|++|+||+ +|++|+|.+||+++.++|+|.+|+|+|.+++ +.++++|++ +.+++.++++++ ++ .+
T Consensus 429 R~~d~i~~-~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~~~~~~~~~~~i~~~~~~~-l~-----~~ 501 (534)
T PRK05852 429 RIKELINR-GGEKISPERVEGVLASHPNVMEAAVFGVPDQLYGEAVAAVIVPRESAPPTAEELVQFCRER-LA-----AF 501 (534)
T ss_pred cchhhEEE-CCEEECHHHHHHHHHhCCCeeeEEEEecCCcCcCceEEEEEEECCCCCCCHHHHHHHHHHh-cc-----cc
Confidence 99999996 8999999999999999999999999998764 568888886 347899999998 88 99
Q ss_pred ccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 614 RANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 614 ~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
++|+.+.+++ +|++.+||++|++|++.
T Consensus 502 ~~P~~i~~v~~iP~t~~GKi~r~~L~~~ 529 (534)
T PRK05852 502 EIPASFQEASGLPHTAKGSLDRRAVAEQ 529 (534)
T ss_pred cCCeEEEEhhhcCCCCCccccHHHHHHH
Confidence 9999999995 77888899999999864
No 49
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.1e-67 Score=584.49 Aligned_cols=493 Identities=19% Similarity=0.238 Sum_probs=384.9
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
-..++.+.|.+.++++|+++|+.+. ++ .+.+||+||.++++++|++|.+.|+++|++|+++++|+++|+++++
T Consensus 12 ~~~~~~~~l~~~a~~~p~~~a~~~~---~~----~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~l 84 (540)
T PRK05857 12 LPSTVLDRVFEQARQQPEAIALRRC---DG----TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVL 84 (540)
T ss_pred CCcchHHHHHHHHhhCCCcEEEeec---CC----CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHH
Confidence 4568999999999999999999754 33 2459999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEeh
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (666)
||+++|++++|+++.++.+++.++++.++++++|+++........+......+.. +..+..... . . +
T Consensus 85 A~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~---------~-~ 151 (540)
T PRK05857 85 ACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPV-IAVDIAAVT--R---------E-S 151 (540)
T ss_pred HHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccce-eEeeccccc--c---------c-c
Confidence 9999999999999999999999999999999999987653221111111122222 222211100 0 0 0
Q ss_pred HHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcc----cccccCCCcEEEEcCChHHHHHH
Q 005991 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFS----LMVQFYPSDIYMSYLPLAHIYER 312 (666)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~----~~~~~~~~d~~l~~~pl~h~~~~ 312 (666)
...... ..........++++++++|||||||.||||++||+++.+.+.... ..+....+++.++.+|++|.+++
T Consensus 152 ~~~~~~--~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l 229 (540)
T PRK05857 152 EHSLDA--ASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGL 229 (540)
T ss_pred cccccc--cccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchH
Confidence 000000 001112234678999999999999999999999999987654322 12355678899999999999999
Q ss_pred HHHHHHHHhCcEEEEecCCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCC
Q 005991 313 ANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT 392 (666)
Q Consensus 313 ~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~ 392 (666)
...+.+++.|+++++.+.++..+++.++++++|+++++|+++..|........
T Consensus 230 ~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~--------------------------- 282 (540)
T PRK05857 230 WWILTCLMHGGLCVTGGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSAN--------------------------- 282 (540)
T ss_pred HHHHHHhhcceeEEecCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCC---------------------------
Confidence 88888999999988766889999999999999999999999988865311000
Q ss_pred CChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCC-----CCCCCccC
Q 005991 393 PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD-----NLSGHVGS 467 (666)
Q Consensus 393 ~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~-----~~~~~vG~ 467 (666)
...+++|.+++||++++....+++ ..+|+++++.||+||++.......... ...+++|+
T Consensus 283 ---------------~~~~~lr~~~~gG~~~~~~~~~~~-~~~g~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~ 346 (540)
T PRK05857 283 ---------------ATVPSLRLVGYGGSRAIAADVRFI-EATGVRTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGR 346 (540)
T ss_pred ---------------CcCccceEEEEcCccCCchhHHHH-HHhCCeeecccCCCcCCceeeecccccccccccccCCcCc
Confidence 001489999999999998887654 457999999999999975433222211 24578999
Q ss_pred CccCcEEEEEecCCCCCCCCC--CCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCC
Q 005991 468 PNPACEIKLVDVPEMNYTSED--QPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKK 545 (666)
Q Consensus 468 p~~~~~v~ivd~~~~~~~~~~--~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~ 545 (666)
|++|++++|+|.++....+.+ ..++.|||+|+|++++.|||++++.|++.| .+|||+|||+|++|++|++++.||.|
T Consensus 347 ~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~-~~g~~~TGDlg~~d~~g~l~~~GR~~ 425 (540)
T PRK05857 347 PYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVL-IDGWVNTGDLLERREDGFFYIKGRSS 425 (540)
T ss_pred ccCCcEEEEECccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhc-CCCceeccceEEEcCCceEEEecccc
Confidence 999999999994433233221 224589999999999999999999999999 68999999999999999999999999
Q ss_pred CeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh-------hHHH----HHHHHcCCCccccc
Q 005991 546 NIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP-------DVLK----DWAASQGIKVIYCF 611 (666)
Q Consensus 546 d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~-------~~l~----~~~~~~~l~~~~~~ 611 (666)
|+||+ +|++|+|.|||++|..||+|.+|+|++.++. +.++++|++.+ +++. ++++++ ++
T Consensus 426 ~~ik~-~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~~l~~~~~~~~~~~-l~----- 498 (540)
T PRK05857 426 EMIIC-GGVNIAPDEVDRIAEGVSGVREAACYEIPDEEFGALVGLAVVASAELDESAARALKHTIAARFRRE-SE----- 498 (540)
T ss_pred ccEec-CCEEECHHHHHHHHHhCCCeeEEEEEecCccccccceEEEEEeCCCCChhhHHHHHHHHHHHHHhh-hc-----
Confidence 99996 8999999999999999999999999997754 45666666532 2333 344454 66
Q ss_pred ccccCcchhHHH-HHHHHhhhhhhhhhccchh
Q 005991 612 SFRANSHVIFIA-LIHNLCQLYSSKELFRSRC 642 (666)
Q Consensus 612 ~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~~~ 642 (666)
.+++|+.+.+++ +|++.+||++|++|++..+
T Consensus 499 ~~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~~ 530 (540)
T PRK05857 499 PMARPSTIVIVTDIPRTQSGKVMRASLAAAAT 530 (540)
T ss_pred cccCCeEEEEhhcCCCCCCcceeHHHHHHhhh
Confidence 899999999995 7888889999999987633
No 50
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.5e-66 Score=581.97 Aligned_cols=503 Identities=22% Similarity=0.328 Sum_probs=413.5
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCHhHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINRPEWLIVDHA 157 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~-~gv~~gd~V~i~~~n~~e~~~~~lA 157 (666)
.|+.++|+..+..+|+++|+.+. + .+.+.+||+||.+++.++|++|.+ .|+++||+|+++++|+++++++++|
T Consensus 10 ~~~~~~l~~~a~~~~~~~a~~~~---~---~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA 83 (576)
T PRK05620 10 LSLTRILEYGSTVHGDTTVTTWG---G---AEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFA 83 (576)
T ss_pred CcHHHHHHHHHHhCCCceEEEEc---C---CceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 58999999999999999998753 1 235779999999999999999986 7999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehH
Q 005991 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYL 237 (666)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (666)
|+++|++++|+++.++.+++.++++.++++++|++....+.+.+....++..+.++..+................+.+|.
T Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (576)
T PRK05620 84 VACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYE 163 (576)
T ss_pred HHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHH
Confidence 99999999999999999999999999999999999888777777777777777776665322111111111233456788
Q ss_pred HHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhc--ccccccCCCcEEEEcCChHHHHHHHHH
Q 005991 238 QLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGF--SLMVQFYPSDIYMSYLPLAHIYERANQ 315 (666)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~--~~~~~~~~~d~~l~~~pl~h~~~~~~~ 315 (666)
++.+.... ..+.....++++++++|||||||.||||+++|+++....... ...+.+..+|++++.+|++|.+++...
T Consensus 164 ~l~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~ 242 (576)
T PRK05620 164 ALLDGRST-VYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSWGVP 242 (576)
T ss_pred HHhhcCCC-cCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhhHHH
Confidence 88764322 222234567999999999999999999999999986554432 234677889999999999999999888
Q ss_pred HHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCC
Q 005991 316 IVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTP 393 (666)
Q Consensus 316 ~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~ 393 (666)
+.++..|+++++.. .++..+++.++++++|+++++|+++..+........ +
T Consensus 243 ~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~---------------------------~ 295 (576)
T PRK05620 243 LAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNP---------------------------P 295 (576)
T ss_pred HHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccC---------------------------c
Confidence 88999999998875 689999999999999999999999988765311000 0
Q ss_pred ChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCC--------CCCCCc
Q 005991 394 SKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD--------NLSGHV 465 (666)
Q Consensus 394 ~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~--------~~~~~v 465 (666)
+ ..++|.+++||+++++++.+.|++.+|+++++.||+||++..++...+.+ ....++
T Consensus 296 ----~-----------~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (576)
T PRK05620 296 ----E-----------RMSLQEIYVGGSAVPPILIKAWEERYGVDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQ 360 (576)
T ss_pred ----c-----------cCceeEEEEcCCCCCHHHHHHHHHHhCCceeeeccccccccceeeeccCCcccccccccccccc
Confidence 0 03799999999999999999999889999999999999987655433221 123478
Q ss_pred cCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhh----------------hhccCCCCeeecccE
Q 005991 466 GSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQT----------------REVIDGDGWLHTGDI 529 (666)
Q Consensus 466 G~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t----------------~~~~~~~gw~~TGDl 529 (666)
|++.++++++++|. +..... .++..|||+++|+.++.|||++++.| .++|..+|||+|||+
T Consensus 361 G~~~~~~~~~i~~~--g~~~~~-~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~ 437 (576)
T PRK05620 361 GRFPASLEYRIVND--GQVMES-TDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDV 437 (576)
T ss_pred CCcCCceeEEEecC--CccccC-CCCCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEecCce
Confidence 99999999999983 333321 12247999999999999999999988 334556899999999
Q ss_pred EEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC---------hhHHH
Q 005991 530 GLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD---------PDVLK 597 (666)
Q Consensus 530 g~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~---------~~~l~ 597 (666)
|++++||.++|+||.||+||. +|++|+|.+||++|.+||.|.+|+|++.++. +.+++++++. .++++
T Consensus 438 ~~~~~dg~l~~~GR~~d~i~~-~G~~i~~~eIE~~l~~~p~v~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~ 516 (576)
T PRK05620 438 GSVTRDGFLTIHDRARDVIRS-GGEWIYSAQLENYIMAAPEVVECAVIGYPDDKWGERPLAVTVLAPGIEPTRETAERLR 516 (576)
T ss_pred EEEcCCceEEEEechhhhhhc-CCEEEcHHHHHHHHhcCCCceEEEEEeccCCCcCceeEEEEEecCCCCcccccHHHHH
Confidence 999999999999999999995 8999999999999999999999999998764 4677777642 36799
Q ss_pred HHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 598 DWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 598 ~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
++++++ |+ .+++|+.|.+++ +|++.+||++|++|++.
T Consensus 517 ~~l~~~-L~-----~~~~P~~i~~v~~~P~t~~GKv~r~~L~~~ 554 (576)
T PRK05620 517 DQLRDR-LP-----NWMLPEYWTFVDEIDKTSVGKFDKKDLRQH 554 (576)
T ss_pred HHHHhh-Cc-----cccCCeEEEEeccCCCCCcccCcHHHHHHH
Confidence 999998 98 999999999995 88888899999999876
No 51
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-66 Score=575.35 Aligned_cols=494 Identities=25% Similarity=0.412 Sum_probs=421.9
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
++.++.+.|.+.++.+|+++|+.+. + +.+||+||++++.++|..|.+.|+++||+|+++++|+++++++++
T Consensus 3 ~~~~i~~~l~~~~~~~~~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~l 73 (513)
T PRK07656 3 EWMTLPELLARAARRFGDKEAYVFG---D------QRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAAL 73 (513)
T ss_pred ccccHHHHHHHHHHHCCCCeEEEeC---C------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHH
Confidence 4578999999999999999999763 2 359999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEeh
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (666)
||+++|++++|+++.++.+++..+++++++++++++.............++.++.++......... ......+|
T Consensus 74 a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 147 (513)
T PRK07656 74 GALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDP------HTEKMKTF 147 (513)
T ss_pred HHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCccccc------CccccccH
Confidence 999999999999999999999999999999999999887766666555666677776654432110 00123467
Q ss_pred HHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHH-H
Q 005991 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-Q 315 (666)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~ 315 (666)
+++...... ..+.....++++++|+|||||||.||+|.++|+++.+.+......+++.++|++++.+|++|.+++.. +
T Consensus 148 ~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (513)
T PRK07656 148 TDFLAAGDP-AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGV 226 (513)
T ss_pred HHHHhcCCC-CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHH
Confidence 777654332 12334467899999999999999999999999999988888777788999999999999999999876 6
Q ss_pred HHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCC
Q 005991 316 IVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPS 394 (666)
Q Consensus 316 ~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~ 394 (666)
+.++..|+++++.+ .++..+++.++++++|++.++|+++..+.+..... .
T Consensus 227 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~----------------------------~- 277 (513)
T PRK07656 227 NAPLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRS----------------------------A- 277 (513)
T ss_pred HHHHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcC----------------------------C-
Confidence 67899999998876 78999999999999999999999999887631100 0
Q ss_pred hhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCC-ccccCcccchhhhhhhccCCCC-C--CCCCccCCcc
Q 005991 395 KMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGC-QVMEGYGMTETSCIISAIDKGD-N--LSGHVGSPNP 470 (666)
Q Consensus 395 ~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~-~v~~~YG~TE~~~~~~~~~~~~-~--~~~~vG~p~~ 470 (666)
...+++|.+++||+++++++.+.+++.+++ .+++.||+||++++++.+.... . ..+++|.|++
T Consensus 278 -------------~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~ 344 (513)
T PRK07656 278 -------------EDLSSLRLAVTGAASMPVALLERFESELGVDIVLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIA 344 (513)
T ss_pred -------------CCccceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEccccCCCceeecCccccccccCCCccccCC
Confidence 001489999999999999999999998998 8999999999987776554433 2 2678999999
Q ss_pred CcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEc
Q 005991 471 ACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKL 550 (666)
Q Consensus 471 ~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl 550 (666)
+++++|+| +++..++.+. .|||+++|+.++.||+++++.+...+..+|||+|||+|+++++|.++++||.||+||+
T Consensus 345 ~~~~~i~d-~~~~~~~~g~---~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~ 420 (513)
T PRK07656 345 GVENKIVN-ELGEEVPVGE---VGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIV 420 (513)
T ss_pred CcEEEEEC-CCCCCCCCCC---ceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEecccceEEe
Confidence 99999999 5566666665 8999999999999999999999999977999999999999999999999999999997
Q ss_pred CCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcchhH
Q 005991 551 AQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSHVIF 621 (666)
Q Consensus 551 ~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~i~~ 621 (666)
+|++|+|.+||++|.++++|.+++|++.++. +.++++|+++ ++++.++++++ ++ .+++|..+.+
T Consensus 421 -~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~-----~~~~p~~i~~ 493 (513)
T PRK07656 421 -GGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEVGKAYVVLKPGAELTEEELIAYCREH-LA-----KYKVPRSIEF 493 (513)
T ss_pred -CCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCceEEEEEEECCCCCCCHHHHHHHHHhh-cc-----cccCCCEEEE
Confidence 8999999999999999999999999987643 5678888864 46889999988 88 8999999999
Q ss_pred HH-HHHHHhhhhhhhhhcc
Q 005991 622 IA-LIHNLCQLYSSKELFR 639 (666)
Q Consensus 622 v~-~~~~~~gK~~r~~l~~ 639 (666)
++ +|++.+||++|++|++
T Consensus 494 v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 494 LDELPKNATGKVLKRALRE 512 (513)
T ss_pred ecCCCCCCccceeHHHHhc
Confidence 95 8888889999999875
No 52
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2e-67 Score=697.71 Aligned_cols=523 Identities=17% Similarity=0.198 Sum_probs=434.4
Q ss_pred hHHHhhHHHHhhccccCCcCCCccccCCCCccccccCCCceEEcCCCCCCCcCccccCCCCCCcccccCCCCCCCCCHHH
Q 005991 4 SSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHD 83 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~ 83 (666)
..+.++|.++|.++.++|+.++++++|...... ..+...+.. ...+.+...++++
T Consensus 461 ~~l~~~~~~lL~~i~~~p~~~i~~l~~~~~~~~-------------------~~~~~~~~~------~~~~~~~~~~~~~ 515 (5163)
T PRK12316 461 ERMARHWQNLLRGMVENPQARVDELPMLDAEER-------------------GQLVEGWNA------TAAEYPLQRGVHR 515 (5163)
T ss_pred HHHHHHHHHHHHHHHhccccccccCCCCCHHHH-------------------HHHHHHhcC------ccccCCCCCCHHH
Confidence 468899999999999999999999998765421 000011100 0111233568999
Q ss_pred HHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCC
Q 005991 84 NFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSY 163 (666)
Q Consensus 84 ~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~ 163 (666)
+|.++++++||++|+.+. + +.+||+||.++++++|+.|.+.|+++|++|+|+++|+++++++++||+++|+
T Consensus 516 ~~~~~a~~~p~~~A~~~~---~------~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~ 586 (5163)
T PRK12316 516 LFEEQVERTPEAPALAFG---E------ETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGG 586 (5163)
T ss_pred HHHHHHHHCCCCeEEEeC---C------ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 999999999999999764 3 3599999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcC
Q 005991 164 ISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQG 243 (666)
Q Consensus 164 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (666)
++||+++.++.+++.++++++++++++++......+. ...... ++.++.... ....
T Consensus 587 ~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~----~~~~~~-~~~~~~~~~------------------~~~~- 642 (5163)
T PRK12316 587 AYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLP----LAAGVQ-VLDLDRPAA------------------WLEG- 642 (5163)
T ss_pred EEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCC----cccCce-EEEecCcch------------------hhcc-
Confidence 9999999999999999999999999999876533221 111122 222221110 0000
Q ss_pred CCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHHHhCc
Q 005991 244 CSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGV 323 (666)
Q Consensus 244 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~ 323 (666)
.....+.....++++++|+|||||||.||||+++|+++.+.+.+....++++++|++++.+|++|++++..++.+|+.|+
T Consensus 643 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~~~~~~L~~G~ 722 (5163)
T PRK12316 643 YSEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVWEFFWPLMSGA 722 (5163)
T ss_pred CCCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHHHHHHHHhCCC
Confidence 01112223457899999999999999999999999999999998888899999999999999999999999999999999
Q ss_pred EEEEec----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhH
Q 005991 324 AVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDR 399 (666)
Q Consensus 324 ~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~ 399 (666)
++++.+ .++..+++.++++++|++.++|+++..|.+... +.
T Consensus 723 ~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~------------------------------~~----- 767 (5163)
T PRK12316 723 RLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED------------------------------VA----- 767 (5163)
T ss_pred EEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc------------------------------cc-----
Confidence 999975 689999999999999999999999998764200 00
Q ss_pred HhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCC--CCCCCCCccCCccCcEEEE
Q 005991 400 LVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDK--GDNLSGHVGSPNPACEIKL 476 (666)
Q Consensus 400 ~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~--~~~~~~~vG~p~~~~~v~i 476 (666)
-.+++|.+++||+++++++.+.|.+.+ +++++|.||+||++..++.... ......++|+|++|++++|
T Consensus 768 ---------~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i 838 (5163)
T PRK12316 768 ---------SCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYI 838 (5163)
T ss_pred ---------cCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEE
Confidence 014799999999999999999887655 7899999999999865543322 2244578999999999999
Q ss_pred EecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccC------CCCeeecccEEEEecCCcEEEEccCCCeEEc
Q 005991 477 VDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVID------GDGWLHTGDIGLWLPGGRLKIIDRKKNIFKL 550 (666)
Q Consensus 477 vd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~------~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl 550 (666)
+| +++..++.|. .|||+|+|+++++||+++|+.|+++|. +++||+|||+|++++||.|+|+||+||+||+
T Consensus 839 ~d-~~~~~~p~G~---~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~ 914 (5163)
T PRK12316 839 LD-ANLEPVPVGV---LGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKL 914 (5163)
T ss_pred EC-CCCCCCCCCC---ceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEE
Confidence 99 5667676665 899999999999999999999999883 4569999999999999999999999999998
Q ss_pred CCeeeeccHHHHHHHhcCcCcceEEEEEeCCCCeEEEEEEcCh------hHHHHHHHHcCCCcccccccccCcchhHHH-
Q 005991 551 AQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDP------DVLKDWAASQGIKVIYCFSFRANSHVIFIA- 623 (666)
Q Consensus 551 ~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~------~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~- 623 (666)
+|+||+|.|||++|.+||+|.+|+|++.+ .+.++|+|++.+ ++++++++++ |+ .|++|+.+++++
T Consensus 915 -~G~rI~~~EIE~~l~~~p~V~~a~V~~~~-~~~lva~vv~~~~~~~~~~~l~~~l~~~-Lp-----~y~vP~~i~~v~~ 986 (5163)
T PRK12316 915 -RGLRIELGEIEARLLEHPWVREAAVLAVD-GKQLVGYVVLESEGGDWREALKAHLAAS-LP-----EYMVPAQWLALER 986 (5163)
T ss_pred -ceEEcChHHHHHHHHhCCCcceEEEEEcC-CCeEEEEEEccCCCCCCHHHHHHHHHhh-CC-----CccCCCeEEEHhh
Confidence 89999999999999999999999999987 788999999753 6899999999 98 999999999995
Q ss_pred HHHHHhhhhhhhhhccc
Q 005991 624 LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 624 ~~~~~~gK~~r~~l~~~ 640 (666)
+|.+.+||++|++|.+.
T Consensus 987 lP~t~~GKidr~~L~~~ 1003 (5163)
T PRK12316 987 LPLTPNGKLDRKALPAP 1003 (5163)
T ss_pred CCCCCCCChhHHhhcCc
Confidence 88888899999999875
No 53
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=2.1e-65 Score=598.42 Aligned_cols=495 Identities=20% Similarity=0.326 Sum_probs=412.2
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcC
Q 005991 67 TLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLI 146 (666)
Q Consensus 67 ~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~ 146 (666)
.+...+++.+...|+.++|.+.++++|+++|+..+ . ..++++++||+|+.+++.++|++|.++|+++||+|+|+++
T Consensus 415 ~~~~~~~~~~~~~Tl~dll~~~a~~~pd~~al~~~---~-~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~ 490 (1452)
T PTZ00297 415 NLPREYNPLAGVRSLGEMWERSVTRHSTFRCLGQT---S-ESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCE 490 (1452)
T ss_pred hhhhcCCCcccCCCHHHHHHHHHHHCCCCeEEEEe---c-cCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Confidence 34455777788899999999999999999999643 1 1244678999999999999999999999999999999999
Q ss_pred CCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCC-CCCCC
Q 005991 147 NRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDE-HLPSL 225 (666)
Q Consensus 147 n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~-~~~~~ 225 (666)
|++||+++++||+++|+++||+++ +.+++.+++++++++++|++.+....+.+... +.++.+|++++... .....
T Consensus 491 N~~Ewvia~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~--~~Lr~IIv~d~~~~~~~~~~ 566 (1452)
T PTZ00297 491 ASRNIVILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRS--RKLETVVYTHSFYDEDDHAV 566 (1452)
T ss_pred CCHHHHHHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc--cCCcEEEEECCCcccccccc
Confidence 999999999999999999999986 46799999999999999999887777665533 36889999864211 10001
Q ss_pred CCCCCcEEEehHHHHhcCCCCCC-CCCCCCCCCcEEEEe---ccCCCCCccEEEecHHHHHHHHhhccccc---ccCCCc
Q 005991 226 PSTSGVKLISYLQLQSQGCSSPQ-PFCPPKPEDIATICY---TSGTTGTPKGAVLTHGNLISNVAGFSLMV---QFYPSD 298 (666)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~---TSGTTG~PKgV~~th~~l~~~~~~~~~~~---~~~~~d 298 (666)
....++.+++|+++...+..... .....+++|++.|+| ||||||.||||++||+|+++.+....... ...++|
T Consensus 567 ~~~~~i~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D 646 (1452)
T PTZ00297 567 ARDLNITLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKH 646 (1452)
T ss_pred cccCCcceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCC
Confidence 11124567889999987743222 123347899999996 99999999999999999999988765422 356789
Q ss_pred EEEEcCChHHHHHHHHHHHHHHhCcEEEEecCCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHH
Q 005991 299 IYMSYLPLAHIYERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTA 378 (666)
Q Consensus 299 ~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~ 378 (666)
++++++|++|++++...+.+++.|+++++ +++..++++|+++|||++++||++|+++.+.+...+...+.+++++|++
T Consensus 647 ~~Ls~LPLaHI~er~~~~~~l~~G~~I~~--~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~ 724 (1452)
T PTZ00297 647 LMVHFTPFAMLFNRVFVLGLFAHGSAVAT--VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFER 724 (1452)
T ss_pred EEEEechHHHHHHHHHHHHHHHcCCEEEe--CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 99999999999998778888999999976 5799999999999999999999999999999999888888999999999
Q ss_pred HHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCC--CCcHHHHHHHHHHhCCccccCcccchhhhhhhccC
Q 005991 379 AYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGAS--PLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAID 456 (666)
Q Consensus 379 ~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~--~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~ 456 (666)
++..|......+..++.++++++|+++|+.+|+++|.+++||+ +++..+.. ++++..+||+||+. +.+.
T Consensus 725 A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~------~i~i~~g~glTE~~---~~~~ 795 (1452)
T PTZ00297 725 AFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE------HISVCYVPCLREVF---FLPS 795 (1452)
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC------CceEEEecceEEee---eecC
Confidence 9998887777676667899999999999999999999999984 55544433 57788999999953 3344
Q ss_pred CCCCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCC
Q 005991 457 KGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGG 536 (666)
Q Consensus 457 ~~~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG 536 (666)
+.+... .|.|+|++|+||.+.++.... .+.|||+++ |++||+.|++.+ +||+ +||
T Consensus 796 ~~~~~~--~G~PlpgvEvKI~~~~E~~~~-----~~~GEIlvr-------~~kdpe~T~e~~--~gW~---------~dG 850 (1452)
T PTZ00297 796 EGVFCV--DGTPAPSLQVDLEPFDEPSDG-----AGIGQLVLA-------KKGEPRRTLPIA--AQWK---------RDR 850 (1452)
T ss_pred CCCccc--CCeecCceEEEEcccccccCC-----CCCCeEEEE-------ECCChHHHHHhh--CcCc---------cCC
Confidence 444332 499999999999986665431 137999996 458999999854 5775 699
Q ss_pred cEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCCCeEEEEEEcChhHHH-HHHHHcCCC
Q 005991 537 RLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLK-DWAASQGIK 606 (666)
Q Consensus 537 ~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~-~~~~~~~l~ 606 (666)
+|+|+||+||+||+++|+||+|+.||+.|.++|.|.+++|+|++. ..++|+|+|+.+.++ +|++++++.
T Consensus 851 ~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~-k~lvALVvpd~e~l~~~wa~~~gi~ 920 (1452)
T PTZ00297 851 TLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPS-RPIIAIVSPNRDTVEFEWRQSHCMG 920 (1452)
T ss_pred eEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCC-CceEEEEEeCHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999984 459999999999999 999988764
No 54
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.1e-66 Score=588.28 Aligned_cols=493 Identities=18% Similarity=0.235 Sum_probs=384.1
Q ss_pred CCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH
Q 005991 76 PEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD 155 (666)
Q Consensus 76 ~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~ 155 (666)
++..|+.++|+++++++|+++|+.+....+...+.++.+||+||.++++++|++|.+. +++||+|+++++|+++|++++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~ 109 (612)
T PRK12476 31 PPGTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGF 109 (612)
T ss_pred CccCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHH
Confidence 3457899999999999999999987511011113356799999999999999999986 999999999999999999999
Q ss_pred HHHHhcCCeEEec-CCCCC--HHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCC--ceEEEEeCCCCCCCCCCCCCCC
Q 005991 156 HACSAYSYISVPL-YDTLG--PDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPS--VHLIVVVGGKDEHLPSLPSTSG 230 (666)
Q Consensus 156 lA~~~~G~~~vpl-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--l~~ii~~~~~~~~~~~~~~~~~ 230 (666)
+||+++|++++|+ ++.++ ++++.+++++++++++|++....+.+.+....++. ...++.++....
T Consensus 110 lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------- 179 (612)
T PRK12476 110 FAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAIPD---------- 179 (612)
T ss_pred HHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEeccccc----------
Confidence 9999999999999 57776 78999999999999999998776665554433332 123444332110
Q ss_pred cEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccc-cCCCcEEEEcCChHHH
Q 005991 231 VKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQ-FYPSDIYMSYLPLAHI 309 (666)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~-~~~~d~~l~~~pl~h~ 309 (666)
.. ..........++++++|+|||||||.||||++||+++.+.+......++ +.+++++++++|++|.
T Consensus 180 -----------~~-~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~ 247 (612)
T PRK12476 180 -----------SA-GESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHD 247 (612)
T ss_pred -----------cc-cccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccc
Confidence 00 0011112346789999999999999999999999999887766555566 7889999999999999
Q ss_pred HHHHHHHHHHHhCcEEEEec-----CCHHHHHHHHH--hhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 005991 310 YERANQIVSVYYGVAVGFYQ-----GDNLKLMDDLA--VLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNS 382 (666)
Q Consensus 310 ~~~~~~~~~l~~G~~~~~~~-----~~~~~~~~~i~--~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 382 (666)
+++...+.+++.|+++++.. .++..+++.++ ++++|+++.+|.++..+....... ..
T Consensus 248 ~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~--~~-------------- 311 (612)
T PRK12476 248 MGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLP--AE-------------- 311 (612)
T ss_pred cchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcCh--hh--------------
Confidence 99987666656666666554 28889999995 589999999999988775420000 00
Q ss_pred HHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh---CC---ccccCcccchhhhhhhccC
Q 005991 383 KKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF---GC---QVMEGYGMTETSCIISAID 456 (666)
Q Consensus 383 k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~---~~---~v~~~YG~TE~~~~~~~~~ 456 (666)
...++ .+++| +++||+++++++.+.|.+.+ |+ .+++.||+||++..++...
T Consensus 312 -----------~~~~~-----------l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~ 368 (612)
T PRK12476 312 -----------GDDID-----------LSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIA 368 (612)
T ss_pred -----------hcCcc-----------hhHhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccC
Confidence 00000 03789 99999999999999999877 44 4899999999876544322
Q ss_pred CCC---------------------------CCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccC
Q 005991 457 KGD---------------------------NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYK 509 (666)
Q Consensus 457 ~~~---------------------------~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~ 509 (666)
+.. ...+++|+|++|++++|+|.++++.++.++ .||||++|++++.|||+
T Consensus 369 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~---~GEl~v~g~~v~~GY~~ 445 (612)
T PRK12476 369 PDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVDPDTGAELPDGE---VGEIWLHGDNIGRGYWG 445 (612)
T ss_pred CCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEeCCCCcCCCCCC---EEEEEEcCCcccccccC
Confidence 210 123579999999999999955477776665 89999999999999999
Q ss_pred ChhhhhhccC------------------CCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHh-cCcC
Q 005991 510 NEVQTREVID------------------GDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYA-KCKF 570 (666)
Q Consensus 510 ~~~~t~~~~~------------------~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~-~~p~ 570 (666)
+|+.|++.|. .++||+|||+|+++ ||+|+|+||+||+||+ +|++|+|.|||++|. .||.
T Consensus 446 ~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-dG~l~i~GR~~d~I~~-~G~~I~p~eIE~~l~~~~p~ 523 (612)
T PRK12476 446 RPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-DGELYITGRIADLIVI-DGRNHYPQDIEATVAEASPM 523 (612)
T ss_pred ChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-CCEEEEEeccCcEEEE-CCcccCHHHHHHHHHHhccc
Confidence 9999999884 23599999999985 9999999999999997 899999999999997 5899
Q ss_pred cce--EEEEEeCCC--CeEEEEEEc-------ChhHHHHHHHHcCCCccccccccc-CcchhHHH---HHHHHhhhhhhh
Q 005991 571 VLQ--CFIYGDSFN--SCLVAIVAV-------DPDVLKDWAASQGIKVIYCFSFRA-NSHVIFIA---LIHNLCQLYSSK 635 (666)
Q Consensus 571 V~~--~~V~g~~~~--~~~va~vv~-------~~~~l~~~~~~~~l~~~~~~~~~~-p~~i~~v~---~~~~~~gK~~r~ 635 (666)
|.+ ++|++.+++ +.++++|++ +.+++.++++++ +. ..+++ |+.+.+++ +|++.+||++|+
T Consensus 524 V~~~~v~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~-l~----~~~~~~p~~v~~v~~~~lP~t~~GKi~r~ 598 (612)
T PRK12476 524 VRRGYVTAFTVPAEDNERLVIVAERAAGTSRADPAPAIDAIRAA-VS----RRHGLAVADVRLVPAGAIPRTTSGKLARR 598 (612)
T ss_pred ccCCcEEEEEecCCCcceEEEEEEecCCcccccHHHHHHHHHHH-HH----HhhCCcceEEEEECCCCcCcCCchHHHHH
Confidence 999 677776653 678888885 335677888887 54 13666 57788885 899999999999
Q ss_pred hhccc
Q 005991 636 ELFRS 640 (666)
Q Consensus 636 ~l~~~ 640 (666)
+|++.
T Consensus 599 ~L~~~ 603 (612)
T PRK12476 599 ACRAQ 603 (612)
T ss_pred HHHHH
Confidence 99763
No 55
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=4.8e-66 Score=573.10 Aligned_cols=496 Identities=22% Similarity=0.274 Sum_probs=406.3
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
..++|.++|++.++++||++|+.+. +. .++++.+||.||.++++++|++|.++|+++||+|+++++|+.+|+++++
T Consensus 5 ~~~~l~~~~~~~a~~~p~~~a~~~~---~~-~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~l 80 (517)
T PRK08008 5 GGQHLRQMWDDLADVYGHKTALIFE---SS-GGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWF 80 (517)
T ss_pred ccccHHHHHHHHHHHCCCceEEEcc---cC-CCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 4478999999999999999999875 32 2445789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcC-CCceEEEEeCCCCCCCCCCCCCCCcEEEe
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEI-PSVHLIVVVGGKDEHLPSLPSTSGVKLIS 235 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~l~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (666)
||+++|++++|+++.++.+++.+++++++++++|++.+..+.+.+..... +.++.++..+...... ....+
T Consensus 81 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 152 (517)
T PRK08008 81 GLAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPAD--------DGVSS 152 (517)
T ss_pred HHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCccc--------ccccC
Confidence 99999999999999999999999999999999999988777666655432 3455565554421110 11234
Q ss_pred hHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHH-
Q 005991 236 YLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN- 314 (666)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~- 314 (666)
+++.............+..++++++|+|||||||.||||++||+++............+..++++++.+|++|..+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 232 (517)
T PRK08008 153 FTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTA 232 (517)
T ss_pred HHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHH
Confidence 5554433222112223446789999999999999999999999999865433333345678999999999999877665
Q ss_pred HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCC
Q 005991 315 QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTP 393 (666)
Q Consensus 315 ~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~ 393 (666)
++.++..|+++++.+ .++..+++.++++++|++.++|.++..+.......
T Consensus 233 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~----------------------------- 283 (517)
T PRK08008 233 AMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSA----------------------------- 283 (517)
T ss_pred HHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCcc-----------------------------
Confidence 567888999999987 78999999999999999999999988775420000
Q ss_pred ChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC-CCCCCCccCCccCc
Q 005991 394 SKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPAC 472 (666)
Q Consensus 394 ~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~ 472 (666)
. ....+++.+.+++ +++++....+.+.+++++++.||+||++..++...+. ....+++|.|++++
T Consensus 284 ~-------------~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~ 349 (517)
T PRK08008 284 N-------------DRQHCLREVMFYL-NLSDQEKDAFEERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCY 349 (517)
T ss_pred c-------------cccccceeeEEec-CCCHHHHHHHHHHhCCeEEeeccccccccccccCCccccccCCccccCCCCc
Confidence 0 0002577776654 7899999888888899999999999998655543332 24567899999999
Q ss_pred EEEEEecCCCCCCCCCCCCCccEEEEeC---CCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEE
Q 005991 473 EIKLVDVPEMNYTSEDQPHPRGEICVRG---PIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (666)
Q Consensus 473 ~v~ivd~~~~~~~~~~~~~~~GEl~v~g---~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ik 549 (666)
+++|+| +++..++.+. .|||+++| ++++.|||++++.|++.|..+|||+|||+|++|+||.++++||.||+||
T Consensus 350 ~~~i~d-~~~~~~~~g~---~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~ 425 (517)
T PRK08008 350 EAEIRD-DHNRPLPAGE---IGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIK 425 (517)
T ss_pred EEEEEC-CCCCCCCCCC---cceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceEE
Confidence 999999 5667676665 89999998 6899999999999999998899999999999999999999999999999
Q ss_pred cCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcchh
Q 005991 550 LAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSHVI 620 (666)
Q Consensus 550 l~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~i~ 620 (666)
+ +|++|+|.+||+++.+||.|.+|+|+|.++. +.++++|+++ .+++.++++++ ++ .+++|..+.
T Consensus 426 ~-~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~-----~~~~P~~~~ 498 (517)
T PRK08008 426 R-GGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFAFCEQN-MA-----KFKVPSYLE 498 (517)
T ss_pred e-CCEEECHHHHHHHHHhCCceeeEEEEccCCCCCCceEEEEEEECCCCCCCHHHHHHHHHhh-cc-----cccCCcEEE
Confidence 7 8999999999999999999999999998754 5788998864 36789999998 88 899999999
Q ss_pred HHH-HHHHHhhhhhhhhhc
Q 005991 621 FIA-LIHNLCQLYSSKELF 638 (666)
Q Consensus 621 ~v~-~~~~~~gK~~r~~l~ 638 (666)
+++ +|++.+||++|+.|+
T Consensus 499 ~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 499 IRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred EeccCCCCCccceehhhcC
Confidence 885 778888999999875
No 56
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=5.7e-66 Score=573.30 Aligned_cols=488 Identities=21% Similarity=0.280 Sum_probs=402.1
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
...++.++|.++++++|+++|+++. + +.+||+||.++++++|.+|.+.|+++|++|+++++|+++|+++++
T Consensus 21 ~~~~l~~~~~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 91 (527)
T TIGR02275 21 QDKPLTDILRDQAARYPDAIAIICG---N------RQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFF 91 (527)
T ss_pred cCCcHHHHHHHHHHHCCCceEEEeC---C------ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHH
Confidence 3468999999999999999999753 2 359999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccH-----HHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCc
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTL-----NTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGV 231 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~ 231 (666)
||+++|++++++++.++.+++.++++.+++++++++.... ..........+.++.++........
T Consensus 92 a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 161 (527)
T TIGR02275 92 ALLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVE---------- 161 (527)
T ss_pred HHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCc----------
Confidence 9999999999999999999999999999999999986532 1222222334555555554321000
Q ss_pred EEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHH
Q 005991 232 KLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYE 311 (666)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~ 311 (666)
..+...+..... ..+.....++++++|+|||||||.||||++||+++...+......+.++.+|++++.+|++|.++
T Consensus 162 --~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~ 238 (527)
T TIGR02275 162 --AELFLWLESPAE-PVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYP 238 (527)
T ss_pred --chhhHHhhCcCc-cccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhh
Confidence 011111111111 11223456799999999999999999999999999988887777788889999999999999999
Q ss_pred HHH--HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Q 005991 312 RAN--QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIV 388 (666)
Q Consensus 312 ~~~--~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~ 388 (666)
+.. .+.++..|+++++.+ .++..+++.++++++|++.++|.++..+.+......
T Consensus 239 ~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~----------------------- 295 (527)
T TIGR02275 239 LSSPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSR----------------------- 295 (527)
T ss_pred hhHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccC-----------------------
Confidence 874 677899999998866 789999999999999999999999987765321100
Q ss_pred cCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccC-CCCCCCCCccC
Q 005991 389 SGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAID-KGDNLSGHVGS 467 (666)
Q Consensus 389 ~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~-~~~~~~~~vG~ 467 (666)
....++|.+++||+++++++.+++.+.+|+++++.||+||++...+... ......+++|+
T Consensus 296 -------------------~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~ 356 (527)
T TIGR02275 296 -------------------YDLSSLKLLQVGGAKFSEAAARRVPAVFGCQLQQVFGMAEGLVNYTRLDDPAEIIFTTQGR 356 (527)
T ss_pred -------------------CCccceEEEEEcCCCCCHHHHHHHHHHhCCeEEeeeccCccCccccCCCCccccccccCCC
Confidence 0014899999999999999999999989999999999999754332221 12234568999
Q ss_pred Cc-cCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCC
Q 005991 468 PN-PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKN 546 (666)
Q Consensus 468 p~-~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d 546 (666)
|+ ++.+++|+| ++++..+.+. .|||+++|+.++.|||++++.|++.|+.+|||+|||+|+++++|+++++||.||
T Consensus 357 ~~~~~~~v~i~d-~~g~~~~~g~---~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d 432 (527)
T TIGR02275 357 PMSPDDEVRVVD-DHGNPVAPGE---TGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKD 432 (527)
T ss_pred CCCCCceEEEEC-CCCCCCCCCC---ceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEEEecccc
Confidence 99 589999999 5566666554 899999999999999999999999998999999999999999999999999999
Q ss_pred eEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC-----hhHHHHHHHHcCCCcccccccccCcc
Q 005991 547 IFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD-----PDVLKDWAASQGIKVIYCFSFRANSH 618 (666)
Q Consensus 547 ~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~-----~~~l~~~~~~~~l~~~~~~~~~~p~~ 618 (666)
+||+ +|++|+|.+||++|.+||+|.+|+|++.++. +.++|+|+++ .++++++++++.++ .+++|..
T Consensus 433 ~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~vv~~~~~~~~~~l~~~l~~~~l~-----~~~~P~~ 506 (527)
T TIGR02275 433 QINR-GGEKIAAEEIENLLLAHPAVHDAALVSMPDELLGEKSCAFIVVRDPALKAAQLRRFLRERGLA-----EYKLPDR 506 (527)
T ss_pred eeec-CCEEECHHHHHHHHHhCCCceEEEEEecCCcccccEEEEEEEECCCCCCHHHHHHHHHhCCCc-----cccCCCE
Confidence 9996 8999999999999999999999999998765 5788888864 46889999986588 9999999
Q ss_pred hhHHH-HHHHHhhhhhhhhhc
Q 005991 619 VIFIA-LIHNLCQLYSSKELF 638 (666)
Q Consensus 619 i~~v~-~~~~~~gK~~r~~l~ 638 (666)
+.+++ +|.+.+||++|++|+
T Consensus 507 i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 507 VEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred EEEeccCCCCCccceeHHhcC
Confidence 99985 777888999999875
No 57
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=4.1e-67 Score=694.75 Aligned_cols=516 Identities=17% Similarity=0.222 Sum_probs=434.2
Q ss_pred hHHHhhHHHHhhccccCCcCCCccccCCCCccccccCCCceEEcCCCCCCCcCccccCCCCCCcccccCCCCCCCCCHHH
Q 005991 4 SSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHD 83 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~ 83 (666)
..+.++|.++|++++++|+.+++++++..+.... .+...+.. ...+.+...++++
T Consensus 3007 ~~l~~~f~~lL~~l~~~p~~~i~~l~~~~~~~~~-------------------~~~~~~~~------~~~~~~~~~~~~~ 3061 (5163)
T PRK12316 3007 ERLARHWQNLLRGMVENPQRSVDELAMLDAEERG-------------------QLLEAWNA------TAAEYPLERGVHR 3061 (5163)
T ss_pred HHHHHHHHHHHHHHHhCCCCchhhccCCCHHHHH-------------------HHHHHhCC------CCcCCCCcCCHHH
Confidence 5688999999999999999999999987654210 01111110 0112334578999
Q ss_pred HHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCC
Q 005991 84 NFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSY 163 (666)
Q Consensus 84 ~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~ 163 (666)
+|+++++++||++|+.+. + +.+||+||.++++++|++|.+.|+++|++|+|+++|+++|+++++||+++|+
T Consensus 3062 ~~~~~~~~~p~~~Av~~~---~------~~lTY~eL~~~~~~lA~~L~~~gv~~~~~V~l~~~~s~~~iv~~lail~aGa 3132 (5163)
T PRK12316 3062 LFEEQVERTPDAVALAFG---E------QRLSYAELNRRANRLAHRLIERGVGPDVLVGVAVERSLEMVVGLLAILKAGG 3132 (5163)
T ss_pred HHHHHHHhCCCCeeEeeC---C------eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHHHHHhCc
Confidence 999999999999999765 3 3599999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcC
Q 005991 164 ISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQG 243 (666)
Q Consensus 164 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (666)
++|||++.++.+++.++++++++++++++... ........ .++.++.... .
T Consensus 3133 ~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~------~~~~~~~~-~~~~~~~~~~---------------------~- 3183 (5163)
T PRK12316 3133 AYVPLDPEYPEERLAYMLEDSGAQLLLSQSHL------RLPLAQGV-QVLDLDRGDE---------------------N- 3183 (5163)
T ss_pred eeeecCCCCcHHHHHHHHHhcCCCEEEeCccc------cCCccCCc-cEEEeccccc---------------------c-
Confidence 99999999999999999999999999997654 11111112 2222222110 0
Q ss_pred CCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHHHhCc
Q 005991 244 CSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGV 323 (666)
Q Consensus 244 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~ 323 (666)
.....+.....++++|||+|||||||.||||+++|+++.+.+.+....++++++|+++++.|++|+.+...++.+|+.|+
T Consensus 3184 ~~~~~~~~~~~~~~~ayii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~i~~~L~~G~ 3263 (5163)
T PRK12316 3184 YAEANPAIRTMPENLAYVIYTSGSTGKPKGVGIRHSALSNHLCWMQQAYGLGVGDRVLQFTTFSFDVFVEELFWPLMSGA 3263 (5163)
T ss_pred ccccCCCCCCCCCCeEEEEeCCCCCCCCCEEEEccHHHHHHHHHHHHhhCCCcccEEEeecCccHHHHHHHHHHHHhCCC
Confidence 00112223457899999999999999999999999999999998888899999999999999999999999999999999
Q ss_pred EEEEec----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhH
Q 005991 324 AVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDR 399 (666)
Q Consensus 324 ~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~ 399 (666)
++++.+ .++..+.+.+++.++|++..+|+++..+.....
T Consensus 3264 ~l~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ps~~~~l~~~~~------------------------------------- 3306 (5163)
T PRK12316 3264 RVVLAGPEDWRDPALLVELINSEGVDVLHAYPSMLQAFLEEED------------------------------------- 3306 (5163)
T ss_pred EEEEcChhhcCCHHHHHHHHHHcCCcEEEcCHHHHHHHHhccc-------------------------------------
Confidence 999976 478899999999999999999999987764210
Q ss_pred HhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC--CCCCCCccCCccCcEEEEE
Q 005991 400 LVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG--DNLSGHVGSPNPACEIKLV 477 (666)
Q Consensus 400 ~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~~~~v~iv 477 (666)
....+++|.+++|||++++++.++|. .+++++|+||+||++++++..... .....++|+|++|++++|+
T Consensus 3307 -------~~~~~~lr~~~~gGe~l~~~~~~~~~--~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~ 3377 (5163)
T PRK12316 3307 -------AHRCTSLKRIVCGGEALPADLQQQVF--AGLPLYNLYGPTEATITVTHWQCVEEGKDAVPIGRPIANRACYIL 3377 (5163)
T ss_pred -------cccCCcceEEEEccccCCHHHHHHHH--hCCcEeeccCCCccEeeEeEEeccCCCCCCCccceecCCCEEEEE
Confidence 00114899999999999999999998 488999999999999877654432 2445789999999999999
Q ss_pred ecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCC------CCeeecccEEEEecCCcEEEEccCCCeEEcC
Q 005991 478 DVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDG------DGWLHTGDIGLWLPGGRLKIIDRKKNIFKLA 551 (666)
Q Consensus 478 d~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~------~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~ 551 (666)
| ++++.++.|. .|||||+|+++++||+|+|+.|+++|.. ++||+|||+|++++||.|+|+||+|++||+
T Consensus 3378 d-~~~~~~p~G~---~GEl~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~qvKi- 3452 (5163)
T PRK12316 3378 D-GSLEPVPVGA---LGELYLGGEGLARGYHNRPGLTAERFVPDPFVPGERLYRTGDLARYRADGVIEYIGRVDHQVKI- 3452 (5163)
T ss_pred C-CCCCCCCCCC---CceEEecccccchhcCCChhhchhhCCCCCCCCCCeeEecCceEEECCCCCEEEecccCCeEee-
Confidence 9 6677777775 8999999999999999999999999943 479999999999999999999999999998
Q ss_pred CeeeeccHHHHHHHhcCcCcceEEEEEeCCCCeEEEEEEcCh------hHHHHHHHHcCCCcccccccccCcchhHHH-H
Q 005991 552 QGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDP------DVLKDWAASQGIKVIYCFSFRANSHVIFIA-L 624 (666)
Q Consensus 552 ~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~------~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~ 624 (666)
+|+||+|.|||++|.+||+|.+|+|++.. .++++|+|+++. ++++++++++ |+ .||+|..+++++ +
T Consensus 3453 ~G~rIel~eIE~~l~~~~~V~~a~v~~~~-~~~l~a~vv~~~~~~~~~~~l~~~l~~~-Lp-----~ymvP~~~~~~~~l 3525 (5163)
T PRK12316 3453 RGFRIELGEIEARLLEHPWVREAVVLAVD-GRQLVAYVVPEDEAGDLREALKAHLKAS-LP-----EYMVPAHLLFLERM 3525 (5163)
T ss_pred CcEeeChHHHHHHHHhCCCcceEEEEEcc-CCeEEEEEEcCCcCcccHHHHHHHHHhh-CC-----cccCcceeeeHhhc
Confidence 89999999999999999999999999987 678999999853 5789999998 98 999999999995 8
Q ss_pred HHHHhhhhhhhhhccc
Q 005991 625 IHNLCQLYSSKELFRS 640 (666)
Q Consensus 625 ~~~~~gK~~r~~l~~~ 640 (666)
|.+.+||+||++|.+.
T Consensus 3526 P~t~~GKvdr~~L~~~ 3541 (5163)
T PRK12316 3526 PLTPNGKLDRKALPRP 3541 (5163)
T ss_pred CCCCCcchhHHhcCCC
Confidence 8888899999999875
No 58
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=6.1e-66 Score=577.92 Aligned_cols=496 Identities=20% Similarity=0.258 Sum_probs=390.7
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
.|+.++|.+.++++||++|+.+. + ..+||+||+++++++|++|.++|+++||+|+|+++|+++|++++|||
T Consensus 14 ~~~~~~l~~~~~~~p~~~Al~~~---~------~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~ 84 (579)
T PLN03102 14 LTPITFLKRASECYPNRTSIIYG---K------TRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAV 84 (579)
T ss_pred ccHHHHHHHHHHhCCCCeEEEEC---C------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence 57899999999999999999763 2 35999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCc-----eEEEEeCCCCCCCCCCCCCCCcEE
Q 005991 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSV-----HLIVVVGGKDEHLPSLPSTSGVKL 233 (666)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l-----~~ii~~~~~~~~~~~~~~~~~~~~ 233 (666)
+++|++++|+++.++.+++.++|+.++++++|++....+.+.+....++.. ..++.++....... .....
T Consensus 85 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 159 (579)
T PLN03102 85 PMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKR-----PSSEE 159 (579)
T ss_pred HhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccC-----Ccccc
Confidence 999999999999999999999999999999999987766665554433211 12334433211100 01112
Q ss_pred EehHHHHhcCCCCCCC----CCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHH
Q 005991 234 ISYLQLQSQGCSSPQP----FCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHI 309 (666)
Q Consensus 234 ~~~~~~~~~~~~~~~~----~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~ 309 (666)
.+++++...+...... .....++++++|+|||||||.||||+++|+++............+...+++++.+|++|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~ 239 (579)
T PLN03102 160 LDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFHC 239 (579)
T ss_pred cCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhhh
Confidence 3566655433221111 112457899999999999999999999999975544333333456677899999999999
Q ss_pred HHHHHHHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Q 005991 310 YERANQIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIV 388 (666)
Q Consensus 310 ~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~ 388 (666)
+++...+.++..|+++++.+ +++..+++.|+++++|++.++|+++..|.+......
T Consensus 240 ~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~----------------------- 296 (579)
T PLN03102 240 NGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDL----------------------- 296 (579)
T ss_pred cchhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCccccc-----------------------
Confidence 99888777888899888777 788999999999999999999999998875311000
Q ss_pred cCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCC---------
Q 005991 389 SGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD--------- 459 (666)
Q Consensus 389 ~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~--------- 459 (666)
. ...+++.+++||+++++.+.+++++ +|+++++.||+||+++.++......
T Consensus 297 --------~-----------~~~~~~~~~~gg~~~~~~~~~~~~~-~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~ 356 (579)
T PLN03102 297 --------S-----------PRSGPVHVLTGGSPPPAALVKKVQR-LGFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQ 356 (579)
T ss_pred --------C-----------CcccceEEEECCCCCCHHHHHHHHH-cCCeEEeecCccccCccccccccccccccCCccc
Confidence 0 0025778999999999999999876 6999999999999986443221100
Q ss_pred -----CCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEec
Q 005991 460 -----NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLP 534 (666)
Q Consensus 460 -----~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~ 534 (666)
...+..+.++++ ++++|.+.++.++.+ .+..|||+|+|++++.|||++|+.|++.| .+|||+|||+|++|+
T Consensus 357 ~~~~~~~~g~~~~~~~~--v~i~~~~~~~~v~~~-~~~~GEl~v~g~~~~~GY~~~~~~t~~~f-~~gw~~TGDlg~~d~ 432 (579)
T PLN03102 357 QMELKARQGVSILGLAD--VDVKNKETQESVPRD-GKTMGEIVIKGSSIMKGYLKNPKATSEAF-KHGWLNTGDVGVIHP 432 (579)
T ss_pred ccccccCCCcccccccc--eEEeccccccccCCC-CCCceEEEEECcchhhhhcCChhhhHhhh-ccCceecCceEEEcC
Confidence 112333444444 455664444444332 12479999999999999999999999999 689999999999999
Q ss_pred CCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC----------------hhH
Q 005991 535 GGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD----------------PDV 595 (666)
Q Consensus 535 dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~----------------~~~ 595 (666)
||+|+|+||.||+||+ +|++|+|.|||+++.+||.|.+|+|++.++. +.++|+|+++ ..+
T Consensus 433 dG~l~i~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~ 511 (579)
T PLN03102 433 DGHVEIKDRSKDIIIS-GGENISSVEVENVLYKYPKVLETAVVAMPHPTWGETPCAFVVLEKGETTKEDRVDKLVTRERD 511 (579)
T ss_pred CCeEEEEeccCcEEEE-CCEEECHHHHHHHHHhCCCcceeEEEeccCccccceeEEEEEecCcccccccccccccccHHH
Confidence 9999999999999996 8999999999999999999999999998764 5788998863 246
Q ss_pred HHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccchh
Q 005991 596 LKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRSRC 642 (666)
Q Consensus 596 l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~~~ 642 (666)
++++++++ |+ .|++|..+.+++ +|.+.+||++|++|++...
T Consensus 512 l~~~~~~~-L~-----~~~~P~~i~~~~~~P~t~~gKi~r~~L~~~~~ 553 (579)
T PLN03102 512 LIEYCREN-LP-----HFMCPRKVVFLQELPKNGNGKILKPKLRDIAK 553 (579)
T ss_pred HHHHHHhh-cc-----cccCCeEEEEcccCCCCCcccccHHHHHHHHH
Confidence 78899998 88 999999999985 8888889999999988743
No 59
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.9e-66 Score=569.66 Aligned_cols=476 Identities=23% Similarity=0.326 Sum_probs=398.5
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCHhHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINRPEWLIVDHA 157 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~-~gv~~gd~V~i~~~n~~e~~~~~lA 157 (666)
..+.+.|.+.|+++||++|+.+. .+.+||+||+++++++|++|++ .|+.+|++|+++++|+++|+++++|
T Consensus 2 ~~~~~~~~~~a~~~p~~~a~~~~---------~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la 72 (496)
T PRK06839 2 QGIAYWIEKRAYLHPDRIAIITE---------EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFA 72 (496)
T ss_pred ccHHHHHHHHHHHCCCCeEEEEC---------CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 46789999999999999999752 2469999999999999999985 7999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehH
Q 005991 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYL 237 (666)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (666)
|+++|++++|+++.++.+++.++++.++++++++++.....+.+...... ...++.+. +++
T Consensus 73 ~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~------------------~~~ 133 (496)
T PRK06839 73 IAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSY-VQRVISIT------------------SLK 133 (496)
T ss_pred HHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccC-cceEEEec------------------chH
Confidence 99999999999999999999999999999999999876655544432221 22222222 122
Q ss_pred HHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHH-HH
Q 005991 238 QLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-QI 316 (666)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~ 316 (666)
++.... ........++++++|+|||||||.||+|+++|+++..........+++..+|++++.+|++|.+++.. .+
T Consensus 134 ~~~~~~---~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~ 210 (496)
T PRK06839 134 EIEDRK---IDNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAF 210 (496)
T ss_pred hhhccC---CCCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHH
Confidence 222211 11223456789999999999999999999999998776665555677889999999999999999876 46
Q ss_pred HHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCCh
Q 005991 317 VSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSK 395 (666)
Q Consensus 317 ~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~ 395 (666)
.++..|+++++.+ .++..+++.++++++|++.++|+++..+.......
T Consensus 211 ~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~------------------------------- 259 (496)
T PRK06839 211 PTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFE------------------------------- 259 (496)
T ss_pred HHHhcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccc-------------------------------
Confidence 7899999998876 79999999999999999999999999886531100
Q ss_pred hhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC--CCCCCCccCCccCcE
Q 005991 396 MWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG--DNLSGHVGSPNPACE 473 (666)
Q Consensus 396 ~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~~~~ 473 (666)
.....++|.+++||+++++++.+.+++. |+++.+.||+||++..++..... ....+++|+|+++++
T Consensus 260 -----------~~~~~~lr~~~~gG~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 327 (496)
T PRK06839 260 -----------TTNLQSVRWFYNGGAPCPEELMREFIDR-GFLFGQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCD 327 (496)
T ss_pred -----------cCCCcccceEEECCCCCCHHHHHHHHHh-CCeeEeeccCCCCCcceEecccccccccCCCCcccCCCce
Confidence 0001489999999999999999999886 99999999999998755433322 245688999999999
Q ss_pred EEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCe
Q 005991 474 IKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQG 553 (666)
Q Consensus 474 v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G 553 (666)
++|+| +++..++.|+ .|||+|+|+.++.||+++++.++..+ .+|||+|||+|+++++|.+++.||.+|+||. +|
T Consensus 328 ~~i~d-~~~~~~~~g~---~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~-~G 401 (496)
T PRK06839 328 YELID-ENKNKVEVGE---VGELLIRGPNVMKEYWNRPDATEETI-QDGWLCTGDLARVDEDGFVYIVGRKKEMIIS-GG 401 (496)
T ss_pred EEEEC-CCcCCCCCCC---ceEEEEECCCcchhhcCChHHHHHHH-cCCCeeecceEEEcCCCcEEEeccccceEEE-CC
Confidence 99999 4455566555 89999999999999999999999888 6899999999999999999999999999996 89
Q ss_pred eeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcchhHHH-
Q 005991 554 EYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSHVIFIA- 623 (666)
Q Consensus 554 ~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~- 623 (666)
++|+|.+||+++.++|+|.+|+|++.++. +.++++|+++ .++++++++++ ++ .+++|..+++++
T Consensus 402 ~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~-----~~~~P~~~~~v~~ 475 (496)
T PRK06839 402 ENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFIVKKSSSVLIEKDVIEHCRLF-LA-----KYKIPKEIVFLKE 475 (496)
T ss_pred EEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHhh-Cc-----CCCCCcEEEEecc
Confidence 99999999999999999999999997654 4788999864 36889999988 88 899999999995
Q ss_pred HHHHHhhhhhhhhhccc
Q 005991 624 LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 624 ~~~~~~gK~~r~~l~~~ 640 (666)
+|.+.+||++|++|++.
T Consensus 476 ~P~t~~GKi~r~~l~~~ 492 (496)
T PRK06839 476 LPKNATGKIQKAQLVNQ 492 (496)
T ss_pred CCCCccccccHHHHHHH
Confidence 88888899999999864
No 60
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.7e-65 Score=575.44 Aligned_cols=499 Identities=26% Similarity=0.344 Sum_probs=406.3
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
.|+.++|+++++++||++|+.+. + +.+||+||.++++++|++|.+.|+++||+|+++++|+++|+++++||
T Consensus 32 ~~l~~~~~~~~~~~p~~~a~~~~---~------~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~ 102 (573)
T PRK05605 32 TTLVDLYDNAVARFGDRPALDFF---G------ATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAV 102 (573)
T ss_pred CCHHHHHHHHHHHCCCCeEEEeC---C------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 48999999999999999999764 2 24999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCC---------------
Q 005991 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLP--------------- 223 (666)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~--------------- 223 (666)
+++|++++|+++.++.+++.+++++++++++|+++.....+.+..... .++.++.++.......
T Consensus 103 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (573)
T PRK05605 103 LRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTT-PLETIVSVNMIAAMPLLQRLALRLPIPALRK 181 (573)
T ss_pred HhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhcc-ccceeEeeecccccccccccccccccccccc
Confidence 999999999999999999999999999999999887665554443322 2334444332110000
Q ss_pred --CCCCCCCcEEEehHHHHhcCCCC---CCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccc-c-CC
Q 005991 224 --SLPSTSGVKLISYLQLQSQGCSS---PQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQ-F-YP 296 (666)
Q Consensus 224 --~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~-~-~~ 296 (666)
...........+|.++....... ........++++++++|||||||.||+|++||+++...+........ + ..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~ 261 (573)
T PRK05605 182 ARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDG 261 (573)
T ss_pred cccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCC
Confidence 00001112335677665442211 01222356789999999999999999999999999887764433222 2 34
Q ss_pred CcEEEEcCChHHHHHHHH-HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHH
Q 005991 297 SDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREK 374 (666)
Q Consensus 297 ~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~ 374 (666)
++++++.+|++|.+++.. .+.+++.|+++++.+ .++..+++.++++++|++.++|+++..|.+......
T Consensus 262 ~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~--------- 332 (573)
T PRK05605 262 PERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERG--------- 332 (573)
T ss_pred CcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccC---------
Confidence 789999999999999876 456789999998877 799999999999999999999999998876321100
Q ss_pred HHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhc
Q 005991 375 LFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISA 454 (666)
Q Consensus 375 l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~ 454 (666)
...+++|.+++||+++++++.+++.+.+++++++.||+||++++++.
T Consensus 333 ---------------------------------~~~~~lr~i~~gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~ 379 (573)
T PRK05605 333 ---------------------------------VDLSGVRNAFSGAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIVG 379 (573)
T ss_pred ---------------------------------CCchhccEEEECCCcCCHHHHHHHHHHhCCCeecccccchhchhhhc
Confidence 00037999999999999999999998889999999999999987765
Q ss_pred cCCCC-CCCCCccCCccCcEEEEEecCC-CCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEE
Q 005991 455 IDKGD-NLSGHVGSPNPACEIKLVDVPE-MNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLW 532 (666)
Q Consensus 455 ~~~~~-~~~~~vG~p~~~~~v~ivd~~~-~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~ 532 (666)
..... ...+++|.|+++++++|+|.++ +..++.+. .|||+++|+.++.||+++++.|++.| .+|||+|||+|++
T Consensus 380 ~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~---~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~ 455 (573)
T PRK05605 380 NPMSDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGE---EGELLVRGPQVFKGYWNRPEETAKSF-LDGWFRTGDVVVM 455 (573)
T ss_pred CCcccCCcCCccccCCCCCEEEEEcCCCCCccCCCCC---eeEEEEecCchhhhhcCChhHhhhcc-cCCCcccCCEEEE
Confidence 54332 4567899999999999999655 35555554 89999999999999999999999998 5789999999999
Q ss_pred ecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc------ChhHHHHHHHHc
Q 005991 533 LPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV------DPDVLKDWAASQ 603 (666)
Q Consensus 533 ~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~------~~~~l~~~~~~~ 603 (666)
+++|+++++||+||+||+ +|++|+|.+||+++.+|+.|.+++|++.++. +.++++|++ +.++++++++++
T Consensus 456 ~~~g~l~i~gR~dd~i~~-~G~~v~p~eIE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~~~~~ 534 (573)
T PRK05605 456 EEDGFIRIVDRIKELIIT-GGFNVYPAEVEEVLREHPGVEDAAVVGLPREDGSEEVVAAVVLEPGAALDPEGLRAYCREH 534 (573)
T ss_pred cCCCcEEEEeccccceee-CCEEECHHHHHHHHHhCcccceEEEEeeecccCCeEEEEEEEECCCCCCCHHHHHHHHHHh
Confidence 999999999999999996 8999999999999999999999999987643 678888875 357889999988
Q ss_pred CCCcccccccccCcchhHH-HHHHHHhhhhhhhhhccc
Q 005991 604 GIKVIYCFSFRANSHVIFI-ALIHNLCQLYSSKELFRS 640 (666)
Q Consensus 604 ~l~~~~~~~~~~p~~i~~v-~~~~~~~gK~~r~~l~~~ 640 (666)
++ .+++|..|+++ ++|++.+||++|++|++.
T Consensus 535 -l~-----~~~~p~~i~~~~~iP~t~~GKi~r~~L~~~ 566 (573)
T PRK05605 535 -LT-----RYKVPRRFYHVDELPRDQLGKVRRREVREE 566 (573)
T ss_pred -Cc-----cccCCcEEEEeccCCCCCcccccHHHHHHH
Confidence 88 89999999888 588888899999999764
No 61
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=7.6e-66 Score=566.74 Aligned_cols=468 Identities=26% Similarity=0.363 Sum_probs=397.3
Q ss_pred CCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005991 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (666)
Q Consensus 78 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA 157 (666)
+.|+.+.|.++++++||++|+.+. + +.+||+||.++++++|++|.+.|+++|++|+++++|+++|+++++|
T Consensus 1 ~~~~~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la 71 (483)
T PRK03640 1 METMPNWLKQRAFLTPDRTAIEFE---E------KKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHA 71 (483)
T ss_pred CCcHHHHHHHHHHhCCCceEEEeC---C------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 468999999999999999999754 2 4599999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehH
Q 005991 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYL 237 (666)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (666)
|+++|++++|+++.++.+++.+++++++++.++++......+..... ..++
T Consensus 72 ~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~-----------------------------~~~~ 122 (483)
T PRK03640 72 LQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGIS-----------------------------VKFA 122 (483)
T ss_pred HHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhcc-----------------------------ccHH
Confidence 99999999999999999999999999999999998765443221100 1133
Q ss_pred HHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHH
Q 005991 238 QLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIV 317 (666)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~ 317 (666)
++...............++++++++|||||||.||+|++||+++...+......+++.++|++++.+|++|.+++...+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~ 202 (483)
T PRK03640 123 ELMNGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMR 202 (483)
T ss_pred HHhhcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHH
Confidence 33222211112223346789999999999999999999999999887776666688899999999999999999988888
Q ss_pred HHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChh
Q 005991 318 SVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKM 396 (666)
Q Consensus 318 ~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~ 396 (666)
++..|+++++.+ .++..+++.++++++|++.++|+++..|.......
T Consensus 203 ~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-------------------------------- 250 (483)
T PRK03640 203 SVIYGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-------------------------------- 250 (483)
T ss_pred HHhcCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc--------------------------------
Confidence 999999999988 79999999999999999999999999886521100
Q ss_pred hhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC--CCCCCCccCCccCcEE
Q 005991 397 WDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG--DNLSGHVGSPNPACEI 474 (666)
Q Consensus 397 ~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~~~~v 474 (666)
....++|.+++||+++++.+.+.++. +++++++.||+||++..++..... ....+++|+|++++++
T Consensus 251 -----------~~~~~lr~~~~~g~~~~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~ 318 (483)
T PRK03640 251 -----------TYPSSFRCMLLGGGPAPKPLLEQCKE-KGIPVYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCEL 318 (483)
T ss_pred -----------ccCCcceEEEEcCCCCCHHHHHHHHH-hCCCeeeeeccCcccccccccCcccccccCCCcccccCCcEE
Confidence 01148999999999999999998887 599999999999987644433332 2456899999999999
Q ss_pred EEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCee
Q 005991 475 KLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGE 554 (666)
Q Consensus 475 ~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~ 554 (666)
+|.| ++ ..++.+. .|||+++|++++.||+++++.+++.| .+|||+|||+|++++||.++++||+||++|+ +|+
T Consensus 319 ~i~~-~~-~~~~~g~---~Gel~v~g~~~~~gy~~~~~~~~~~~-~~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~-~G~ 391 (483)
T PRK03640 319 KIEK-DG-VVVPPFE---EGEIVVKGPNVTKGYLNREDATRETF-QDGWFKTGDIGYLDEEGFLYVLDRRSDLIIS-GGE 391 (483)
T ss_pred EEec-CC-CcCCCCC---ceEEEEECcchhhhhcCCHHHHHHHH-hcCCeeccceEEEcCCCCEEEeecccCeEEe-CCE
Confidence 9998 33 4555554 89999999999999999999999998 6899999999999999999999999999997 899
Q ss_pred eeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC----hhHHHHHHHHcCCCcccccccccCcchhHH-HHHH
Q 005991 555 YVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD----PDVLKDWAASQGIKVIYCFSFRANSHVIFI-ALIH 626 (666)
Q Consensus 555 ~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~----~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v-~~~~ 626 (666)
+|+|.+||+.+.++|+|.+++|++.+++ +.++++++++ .++++++++++ ++ .+++|..|+++ ++|+
T Consensus 392 ~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-l~-----~~~~p~~i~~~~~iP~ 465 (483)
T PRK03640 392 NIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFVVKSGEVTEEELRHFCEEK-LA-----KYKVPKRFYFVEELPR 465 (483)
T ss_pred EECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEEEeCCCCCHHHHHHHHHHh-cc-----CCCCCcEEEEeCCCCC
Confidence 9999999999999999999999987653 4677777753 47899999988 88 99999999988 4888
Q ss_pred HHhhhhhhhhhccc
Q 005991 627 NLCQLYSSKELFRS 640 (666)
Q Consensus 627 ~~~gK~~r~~l~~~ 640 (666)
+.+||++|++|++.
T Consensus 466 t~~gK~~r~~l~~~ 479 (483)
T PRK03640 466 NASGKLLRHELKQL 479 (483)
T ss_pred CCccceeHHHHHHH
Confidence 88899999999875
No 62
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.5e-65 Score=574.03 Aligned_cols=500 Identities=23% Similarity=0.352 Sum_probs=398.8
Q ss_pred CCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCCHhHHHHHH
Q 005991 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFH-GLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 78 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~-gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
..++.++|.++++++|+++|+... + +.+||.||.++++++|++|.+. |+++||+|+++++|+++|+++++
T Consensus 23 ~~~~~~~l~~~~~~~p~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~l 93 (562)
T PRK12492 23 YKSVVEVFERSCKKFADRPAFSNL---G------VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVF 93 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEecC---C------ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 468999999999999999999643 1 3599999999999999999985 99999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeC--CCCCCCC-----------
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVG--GKDEHLP----------- 223 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~--~~~~~~~----------- 223 (666)
||+++|++++|+++.++.+++.+++++++++++++++.....+....... ....++... +......
T Consensus 94 a~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (562)
T PRK12492 94 GALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDT-GIEYLIEAKMGDLLPAAKGWLVNTVVDKV 172 (562)
T ss_pred HHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhcc-CceEEEeechhhccccccchhcccccccc
Confidence 99999999999999999999999999999999999876554444332221 112221110 0000000
Q ss_pred -C-CCCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccc--------
Q 005991 224 -S-LPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQ-------- 293 (666)
Q Consensus 224 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~-------- 293 (666)
. ..........+|+++...+........+..++++++|+|||||||.||||+++|+++...+......+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~ 252 (562)
T PRK12492 173 KKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQP 252 (562)
T ss_pred cccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccc
Confidence 0 000000122456666554332222223456789999999999999999999999999877655433321
Q ss_pred -cCC-CcEEEEcCChHHHHHHHH-HHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhc
Q 005991 294 -FYP-SDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKAS 368 (666)
Q Consensus 294 -~~~-~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 368 (666)
+.. .+++++.+|++|.+++.. .+..+..|++.++.. .++..+++.++++++|++.++|+++..+......
T Consensus 253 ~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~----- 327 (562)
T PRK12492 253 LMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGF----- 327 (562)
T ss_pred cccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCc-----
Confidence 223 357889999999999876 455677888776654 5889999999999999999999999887652100
Q ss_pred chHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchh
Q 005991 369 GTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTET 448 (666)
Q Consensus 369 ~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~ 448 (666)
. .....++|.+++||+++++++.+.|++.++++++++||+||+
T Consensus 328 -----------------------------~--------~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~ 370 (562)
T PRK12492 328 -----------------------------K--------DLDFSALKLTNSGGTALVKATAERWEQLTGCTIVEGYGLTET 370 (562)
T ss_pred -----------------------------c--------cccccceeEEEeccccCCHHHHHHHHHHhCCceeeccCcccc
Confidence 0 000147999999999999999999998889999999999999
Q ss_pred hhhhhccCCCC-CCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecc
Q 005991 449 SCIISAIDKGD-NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTG 527 (666)
Q Consensus 449 ~~~~~~~~~~~-~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TG 527 (666)
+.+++...... ...+++|+|+++++++|+| +++..++.+. .|||+++|+.++.|||++++.|++.|+.+|||+||
T Consensus 371 ~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd-~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TG 446 (562)
T PRK12492 371 SPVASTNPYGELARLGTVGIPVPGTALKVID-DDGNELPLGE---RGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTG 446 (562)
T ss_pred CceeeecCCcccccCCccceecCCCEEEEEC-CCCCCCCCCC---ceEEEEeCCccccccccCchhhhhcccCCCceecC
Confidence 87665443322 3457899999999999999 5666666655 89999999999999999999999999778999999
Q ss_pred cEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc-----ChhHHHHH
Q 005991 528 DIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV-----DPDVLKDW 599 (666)
Q Consensus 528 Dlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~-----~~~~l~~~ 599 (666)
|+|+++++|.++|.||.||+||+ +|++|+|.+||+.+.+||.|.+++|++.++. +.+++++++ +.++++++
T Consensus 447 D~g~~~~~G~l~i~GR~~~~i~~-~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~ 525 (562)
T PRK12492 447 DIAVIDPDGFVRIVDRKKDLIIV-SGFNVYPNEIEDVVMAHPKVANCAAIGVPDERSGEAVKLFVVARDPGLSVEELKAY 525 (562)
T ss_pred cEEEECCCCeEEEecccCCeEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCCCCHHHHHHH
Confidence 99999999999999999999997 7999999999999999999999999997653 568888875 34788999
Q ss_pred HHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 600 AASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 600 ~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
++++ ++ .|++|.++.+++ +|++.+||++|++|++.
T Consensus 526 ~~~~-l~-----~~~~P~~i~~~~~~P~t~~GK~~r~~L~~~ 561 (562)
T PRK12492 526 CKEN-FT-----GYKVPKHIVLRDSLPMTPVGKILRRELRDI 561 (562)
T ss_pred HHHh-cc-----cccCCcEEEEeccCCCCCCCceeHHHHHhh
Confidence 9998 88 899999999995 88888899999999864
No 63
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.5e-65 Score=568.13 Aligned_cols=496 Identities=21% Similarity=0.297 Sum_probs=407.0
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
.++.++|+..++++|++.++.++. + ++++.+||.||.++++++|++|.+.|+++||+|+++++|+++|+++++||
T Consensus 10 ~~~~~~l~~~~~~~~~~~~~~~~~--~---~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~ 84 (539)
T PRK07008 10 LLISSLIAHAARHAGDTEIVSRRV--E---GDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGV 84 (539)
T ss_pred CCHHHHHHHHHhhCCCceEEEeec--c---CcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence 478999999999999998886541 1 23567999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHH
Q 005991 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQ 238 (666)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (666)
+++|++++|+++.++++++.++++++++++++++....+.+.+.....+.++.++..++... .. .....+.++++
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~ 159 (539)
T PRK07008 85 SGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAH-LP----AGSTPLLCYET 159 (539)
T ss_pred HhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCc-cc----cCCcccccHHH
Confidence 99999999999999999999999999999999998877776666666666777666554321 11 11233567777
Q ss_pred HHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHH--hhcccccccCCCcEEEEcCChHHHHHHHHHH
Q 005991 239 LQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNV--AGFSLMVQFYPSDIYMSYLPLAHIYERANQI 316 (666)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~--~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~ 316 (666)
+....... .......++++++++|||||||.||||++||++++... ......+++.++|++++.+|++|.+++...+
T Consensus 160 l~~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~ 238 (539)
T PRK07008 160 LVGAQDGD-YDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPY 238 (539)
T ss_pred HhcccCCC-cCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHHHHH
Confidence 65443221 12234567899999999999999999999999986433 2333457788899999999999998877777
Q ss_pred HHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCC
Q 005991 317 VSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPS 394 (666)
Q Consensus 317 ~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~ 394 (666)
.++..|+++++.+ +++..+++.++++++|++.++|+++..+.+......
T Consensus 239 ~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~----------------------------- 289 (539)
T PRK07008 239 SAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAG----------------------------- 289 (539)
T ss_pred HHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccC-----------------------------
Confidence 8899999999875 689999999999999999999999988765321100
Q ss_pred hhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCC-----------CCCC
Q 005991 395 KMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD-----------NLSG 463 (666)
Q Consensus 395 ~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~-----------~~~~ 463 (666)
...+++|.+++||+++++++.+.+.+.+++++++.||+||++..++...... ....
T Consensus 290 -------------~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (539)
T PRK07008 290 -------------LRFSTLRRTVIGGSACPPAMIRTFEDEYGVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLE 356 (539)
T ss_pred -------------CCcccceEEEEcCCCCCHHHHHHHHHHhCCceecccccccccccceecccccccccCCchhhhhhcc
Confidence 0014899999999999999999998889999999999999986554332110 1236
Q ss_pred CccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEcc
Q 005991 464 HVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDR 543 (666)
Q Consensus 464 ~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR 543 (666)
++|+|+|+++++|+| ++++.++.+. +..|||+++|+.++.||+++++ ..+ .+|||+|||+|++|+||+++++||
T Consensus 357 ~~G~p~pg~~~~i~d-~~~~~~~~~~-~~~Gei~v~g~~~~~gy~~~~~---~~~-~~g~~~TGD~~~~~~dg~l~~~GR 430 (539)
T PRK07008 357 KQGRVIYGVDMKIVG-DDGRELPWDG-KAFGDLQVRGPWVIDRYFRGDA---SPL-VDGWFPTGDVATIDADGFMQITDR 430 (539)
T ss_pred cCCccccceEEEEEC-CCCCccCCCC-CcceEEEEeCCccchhhcCChh---hhh-cCCCcccCceEEEcCCCcEEEeec
Confidence 799999999999999 4555554332 1369999999999999999984 344 479999999999999999999999
Q ss_pred CCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc------ChhHHHHHHHHcCCCcccccccc
Q 005991 544 KKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV------DPDVLKDWAASQGIKVIYCFSFR 614 (666)
Q Consensus 544 ~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~------~~~~l~~~~~~~~l~~~~~~~~~ 614 (666)
++|+||. +|++|+|.+||+++..||.|.+++|++.++. +.++++|+. +++++.++++++ ++ .|+
T Consensus 431 ~~d~i~~-~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~-----~~~ 503 (539)
T PRK07008 431 SKDVIKS-GGEWISSIDIENVAVAHPAVAEAACIACAHPKWDERPLLVVVKRPGAEVTREELLAFYEGK-VA-----KWW 503 (539)
T ss_pred ccCEEEe-CCeEEcHHHHHHHHHhCCceeEEEEEecCCchhccceEEEEEeCCCCccCHHHHHHHHHhh-cc-----ccc
Confidence 9999996 8999999999999999999999999997753 467777764 347899999998 88 899
Q ss_pred cCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 615 ANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 615 ~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
+|+.|.+++ +|++.+||++|++|++.
T Consensus 504 ~P~~i~~v~~lP~t~sgKi~r~~l~~~ 530 (539)
T PRK07008 504 IPDDVVFVDAIPHTATGKLQKLKLREQ 530 (539)
T ss_pred CCeEEEEecCCCCCCccceeHHHHHHH
Confidence 999999885 88888899999999875
No 64
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-65 Score=569.76 Aligned_cols=488 Identities=22% Similarity=0.283 Sum_probs=403.2
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
...|+.++|...++++||++|+.+. + +.+||+||.++++++|..|.+.|+++|++|+++++|+++++++++
T Consensus 5 ~~~~~~~~~~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~l 75 (528)
T PRK07470 5 RVMNLAHFLRQAARRFPDRIALVWG---D------RSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMF 75 (528)
T ss_pred cCCCHHHHHHHHHHHCCCceEEEEC---C------ccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHH
Confidence 4578999999999999999999753 2 349999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEeh
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (666)
||+++|++++|+++.++.+++.+++++++++.++++....+.+.......+....++.++... ...++
T Consensus 76 A~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 143 (528)
T PRK07470 76 AAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGAR------------AGLDY 143 (528)
T ss_pred HHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCc------------ccccH
Confidence 999999999999999999999999999999999999877665555444444555555554321 01356
Q ss_pred HHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc--cccCCCcEEEEcCChHHHHHHHH
Q 005991 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM--VQFYPSDIYMSYLPLAHIYERAN 314 (666)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~--~~~~~~d~~l~~~pl~h~~~~~~ 314 (666)
+++...............++++++|+|||||||.||||+++|+++...+...... .+...+|+++.++|++|.+++..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~ 223 (528)
T PRK07470 144 EALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQ 223 (528)
T ss_pred HHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHH
Confidence 6655433222222334567899999999999999999999999997655432222 24677899999999999999876
Q ss_pred HHHHHHhCcEEEEec---CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCC
Q 005991 315 QIVSVYYGVAVGFYQ---GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQ 391 (666)
Q Consensus 315 ~~~~l~~G~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~ 391 (666)
.+ .++.|++.++++ .++..+++.|+++++|++.++|+++..+.+....
T Consensus 224 ~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~---------------------------- 274 (528)
T PRK07470 224 LC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAV---------------------------- 274 (528)
T ss_pred HH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCc----------------------------
Confidence 54 567777776664 6899999999999999999999999887542100
Q ss_pred CCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCC--------CCCCCC
Q 005991 392 TPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDK--------GDNLSG 463 (666)
Q Consensus 392 ~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~--------~~~~~~ 463 (666)
.....+++|.+++||++++++..+++.+.+|..+++.||+||+++.++.... .....+
T Consensus 275 --------------~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~ 340 (528)
T PRK07470 275 --------------DRYDHSSLRYVIYAGAPMYRADQKRALAKLGKVLVQYFGLGEVTGNITVLPPALHDAEDGPDARIG 340 (528)
T ss_pred --------------CCCCCcceEEEEEcCCCCCHHHHHHHHHHhCcHHHHhCCCcccCCceeecchhhccccccccceee
Confidence 0001148999999999999999999988889999999999998876554322 123457
Q ss_pred CccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEcc
Q 005991 464 HVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDR 543 (666)
Q Consensus 464 ~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR 543 (666)
++|.|+++++++++| ++++.++.++ .|||+++|+.++.||+++++.+++.| .+|||+|||+|++++||++++.||
T Consensus 341 ~~G~~~~g~~~~i~d-~~~~~~~~g~---~Gel~i~~~~~~~gy~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~~~GR 415 (528)
T PRK07470 341 TCGFERTGMEVQIQD-DEGRELPPGE---TGEICVIGPAVFAGYYNNPEANAKAF-RDGWFRTGDLGHLDARGFLYITGR 415 (528)
T ss_pred ccCcccCCcEEEEEC-CCCCCCCCCC---ceEEEEeCCccchhhcCCHHHHHhhh-cCCcEecceeEEEccCCeEEEeCC
Confidence 899999999999999 5666666665 89999999999999999999999988 689999999999999999999999
Q ss_pred CCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc------ChhHHHHHHHHcCCCcccccccc
Q 005991 544 KKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV------DPDVLKDWAASQGIKVIYCFSFR 614 (666)
Q Consensus 544 ~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~------~~~~l~~~~~~~~l~~~~~~~~~ 614 (666)
.||+||+ +|++|+|.+||+++.++|+|.+|+|++.++. +.+++++++ +.++++++++++ ++ .++
T Consensus 416 ~dd~i~~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~-----~~~ 488 (528)
T PRK07470 416 ASDMYIS-GGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVWGEVGVAVCVARDGAPVDEAELLAWLDGK-VA-----RYK 488 (528)
T ss_pred ccceEEe-CCEEECHHHHHHHHHhCCCceEEEEEeccCcccCceeEEEEEECCCCCCCHHHHHHHHHHh-hh-----cCC
Confidence 9999997 8999999999999999999999999998754 467788874 446889999988 88 999
Q ss_pred cCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 615 ANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 615 ~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
+|..+++++ +|++.+||++|++|++.
T Consensus 489 ~P~~~~~~~~iP~t~~GKi~r~~l~~~ 515 (528)
T PRK07470 489 LPKRFFFWDALPKSGYGKITKKMVREE 515 (528)
T ss_pred CCcEEEEeccCCCCCcccccHHHHHHH
Confidence 999998885 88888899999999754
No 65
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=1.3e-65 Score=572.71 Aligned_cols=506 Identities=24% Similarity=0.329 Sum_probs=407.7
Q ss_pred cCccccCCCCCCcccccCCCCCCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCC
Q 005991 55 KWNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHG 134 (666)
Q Consensus 55 ~~~~~r~~~~~~~~~~~~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~g 134 (666)
...+||+..... +.+...|+.++|.+.++++|+++|+.+. .+ .+.+||+||.+++.++|++|.+.|
T Consensus 11 ~~~~~~~~~~~~-------~~~~~~~~~~~l~~~a~~~p~~~a~~~~---~~----~~~~Ty~~l~~~~~~la~~L~~~g 76 (546)
T PLN02330 11 NEHIFRSRYPSV-------PVPDKLTLPDFVLQDAELYADKVAFVEA---VT----GKAVTYGEVVRDTRRFAKALRSLG 76 (546)
T ss_pred cceeeccCCCCC-------CCCCCCcHHHHHhhhhhcCCCccEEEec---CC----CCcccHHHHHHHHHHHHHHHHHhC
Confidence 345666664442 1245688999999999999999999753 11 145999999999999999999999
Q ss_pred CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEE
Q 005991 135 LQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVV 214 (666)
Q Consensus 135 v~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~ 214 (666)
+++|++|+++++|+++++++++||+++|++++|+++.++.+++.++++++++++++++......+... ... ++.
T Consensus 77 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~-----~~~-~i~ 150 (546)
T PLN02330 77 LRKGQVVVVVLPNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL-----GLP-VIV 150 (546)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc-----CCc-EEE
Confidence 99999999999999999999999999999999999999999999999999999999998776655432 122 333
Q ss_pred eCCCCCCCCCCCCCCCcEEEehHHHHhcCCCCC--CCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccccc
Q 005991 215 VGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSP--QPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMV 292 (666)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~ 292 (666)
++... ......|++++....... .......++++++|+|||||||.||||++||+++...+.......
T Consensus 151 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~ 220 (546)
T PLN02330 151 LGEEK----------IEGAVNWKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSV 220 (546)
T ss_pred ecCCC----------CCCcccHHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhcc
Confidence 33211 001234666654432211 112234578999999999999999999999999987665322111
Q ss_pred c--cCCCcEEEEcCChHHHHHHHH-HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhc
Q 005991 293 Q--FYPSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKAS 368 (666)
Q Consensus 293 ~--~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 368 (666)
+ ....++++..+|++|.+++.. ++.++..|+++++.+ +++..+++.++++++|++.++|+++..+......
T Consensus 221 ~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~----- 295 (546)
T PLN02330 221 GPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIV----- 295 (546)
T ss_pred CccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccc-----
Confidence 1 223568999999999999875 567889999998877 7999999999999999999999999887652100
Q ss_pred chHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccch
Q 005991 369 GTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTE 447 (666)
Q Consensus 369 ~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE 447 (666)
....+. ..++|.+++||+++++++.+++.+.+ ++++++.||+||
T Consensus 296 -----------------------------~~~~~~------~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE 340 (546)
T PLN02330 296 -----------------------------EEFDLS------KLKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEAYGLTE 340 (546)
T ss_pred -----------------------------cccccc------hheeeeEEEcCCcCCHHHHHHHHHHcCCCeEEecccccc
Confidence 000000 01589999999999999999999988 899999999999
Q ss_pred hhhhhhccC-CC----CCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCC
Q 005991 448 TSCIISAID-KG----DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDG 522 (666)
Q Consensus 448 ~~~~~~~~~-~~----~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~g 522 (666)
++++..... +. ....+++|.|+++++++|+|+++++.++.++ .|||+|+|++++.||+++++.+++.++.+|
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~---~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g 417 (546)
T PLN02330 341 HSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNT---PGELCVRSQCVMQGYYNNKEETDRTIDEDG 417 (546)
T ss_pred cccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCC---ceEEEEecchhhhhhccCccchhhhccCCC
Confidence 876543221 11 1334689999999999999976777776665 899999999999999999999999998899
Q ss_pred eeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------h
Q 005991 523 WLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------P 593 (666)
Q Consensus 523 w~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~ 593 (666)
||+|||+|++++||.++++||.+|+||+ +|++|+|.+||+++.++|+|.+++|++.+++ +.++++|++. .
T Consensus 418 ~~~TGD~~~~~~dG~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~ 496 (546)
T PLN02330 418 WLHTGDIGYIDDDGDIFIVDRIKELIKY-KGFQVAPAELEAILLTHPSVEDAAVVPLPDEEAGEIPAACVVINPKAKESE 496 (546)
T ss_pred ceecccEEEEeCCCcEEEEechHHhhhc-CCEEECHHHHHHHHHhCCchheEEEEeccccccCceeEEEEEECCCCCCCH
Confidence 9999999999999999999999999997 7999999999999999999999999996643 5788888863 3
Q ss_pred hHHHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 594 DVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 594 ~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
++++++++++ ++ .++.|+.+.+++ +|++.+||++|++|++.
T Consensus 497 ~~l~~~~~~~-l~-----~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~ 538 (546)
T PLN02330 497 EDILNFVAAN-VA-----HYKKVRVVQFVDSIPKSLSGKIMRRLLKEK 538 (546)
T ss_pred HHHHHHHHHh-cc-----cccCceEEEEeccCCCCCCcceeHHHHHHH
Confidence 6789999988 88 999999888885 88888899999998764
No 66
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-65 Score=565.49 Aligned_cols=469 Identities=19% Similarity=0.230 Sum_probs=392.6
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
+++.+.|+++++++||++|+.+. + ..+||.||.++++++|++|.+.|. +|++|+|+++|+++|+++++||
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~ 70 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKEN---D------RVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGA 70 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecC---C------cEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHH
Confidence 36789999999999999999753 2 359999999999999999999984 8999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHH
Q 005991 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQ 238 (666)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (666)
+++|++++|+++.++++++.++++.++++.++++......+... ...++.++. +.+
T Consensus 71 ~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~------~~~~~~~~~------------------~~~ 126 (487)
T PRK07638 71 AMAGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDE------EGRVIEIDE------------------WKR 126 (487)
T ss_pred HHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhc------cceEEEehh------------------hhh
Confidence 99999999999999999999999999999999987654333211 011222211 111
Q ss_pred HHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHH
Q 005991 239 LQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVS 318 (666)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~ 318 (666)
....... .........+++++|+|||||||.||||+++|++++..+......+++.++|+++...|++|..++...+.+
T Consensus 127 ~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~ 205 (487)
T PRK07638 127 MIEKYLP-TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAIST 205 (487)
T ss_pred hhhhccc-cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHH
Confidence 1111111 011112235678999999999999999999999999888877777888999999999999999888778889
Q ss_pred HHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhh
Q 005991 319 VYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMW 397 (666)
Q Consensus 319 l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~ 397 (666)
++.|+++++.+ +++..+++.++++++|+++++|+++..|.+..
T Consensus 206 l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~------------------------------------ 249 (487)
T PRK07638 206 LYVGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKEN------------------------------------ 249 (487)
T ss_pred HccCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCc------------------------------------
Confidence 99999999887 79999999999999999999999998886520
Q ss_pred hHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCCC-CCCCCCccCCccCcEEE
Q 005991 398 DRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPACEIK 475 (666)
Q Consensus 398 d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~~v~ 475 (666)
....+.+.+++||+++++++.+++.+.+ ++.+++.||+||++.++...... ....+++|+|+++++++
T Consensus 250 ----------~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 319 (487)
T PRK07638 250 ----------RVIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVDEESERRPNSVGRPFHNVQVR 319 (487)
T ss_pred ----------CcCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEecccccCCCCCCCCcccCCcEEE
Confidence 0012456678899999999999999888 78999999999998765544322 24567899999999999
Q ss_pred EEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeee
Q 005991 476 LVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEY 555 (666)
Q Consensus 476 ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~ 555 (666)
|+| +++..++.+. .|||+++|+.++.||+++++.+.+.+ .+|||+|||+|++|+||+++++||++|+||+ +|++
T Consensus 320 i~d-~~g~~~~~g~---~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~-~G~~ 393 (487)
T PRK07638 320 ICN-EAGEEVQKGE---IGTVYVKSPQFFMGYIIGGVLARELN-ADGWMTVRDVGYEDEEGFIYIVGREKNMILF-GGIN 393 (487)
T ss_pred EEC-CCCCCCCCCC---CeEEEEecccceeeecCCHHHHhhhc-cCCcEecCccEeEcCCCeEEEEecCCCeEEe-CCEE
Confidence 999 5566666554 89999999999999999999888766 7899999999999999999999999999997 8999
Q ss_pred eccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc--ChhHHHHHHHHcCCCcccccccccCcchhHHH-HHHHHh
Q 005991 556 VAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV--DPDVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLC 629 (666)
Q Consensus 556 v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~--~~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~ 629 (666)
|+|.+||+++.+||+|.+|+|++.++. +.++++|+. +.++++++++++ ++ .+++|..+++++ +|++.+
T Consensus 394 v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~l~~~~~~~-l~-----~~~~p~~i~~v~~iP~t~~ 467 (487)
T PRK07638 394 IFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVAIIKGSATKQQLKSFCLQR-LS-----SFKIPKEWHFVDEIPYTNS 467 (487)
T ss_pred ECHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEEEEECCCCHHHHHHHHHHH-hh-----cccCCcEEEEecccCCCCc
Confidence 999999999999999999999998754 578888875 457899999998 87 899999999985 788888
Q ss_pred hhhhhhhhccc
Q 005991 630 QLYSSKELFRS 640 (666)
Q Consensus 630 gK~~r~~l~~~ 640 (666)
||++|++|++.
T Consensus 468 GKv~r~~L~~~ 478 (487)
T PRK07638 468 GKIARMEAKSW 478 (487)
T ss_pred ccccHHHHHHH
Confidence 99999999865
No 67
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=2.3e-65 Score=567.64 Aligned_cols=490 Identities=22% Similarity=0.301 Sum_probs=412.0
Q ss_pred CHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHH
Q 005991 80 TLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACS 159 (666)
Q Consensus 80 tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~ 159 (666)
+++++|...++++|+++|+.+. + +.+||+||.+++.++|++|.+.|+++|++|+++++|+++++++++||+
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~ 71 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHH---D------RTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAA 71 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 4688999999999999999764 2 359999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHH
Q 005991 160 AYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQL 239 (666)
Q Consensus 160 ~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (666)
++|++++|+++.++.+++..++++++++++|++......+......++.+..++.+++..... ........|+++
T Consensus 72 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 146 (515)
T TIGR03098 72 LAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHAS-----EGGGESPSWPKL 146 (515)
T ss_pred hcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCccccc-----CCccccccHHHh
Confidence 999999999999999999999999999999999877666655555556666666665432111 112233456666
Q ss_pred HhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHH
Q 005991 240 QSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSV 319 (666)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l 319 (666)
...... ....+...+++++|+|||||||.||||++||+++...+......+++..+|++++.+|++|.+++...+.++
T Consensus 147 ~~~~~~--~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l 224 (515)
T TIGR03098 147 LALGDA--DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAF 224 (515)
T ss_pred hccccc--cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHH
Confidence 543322 122334568999999999999999999999999998888777777888999999999999999998888999
Q ss_pred HhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhh
Q 005991 320 YYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWD 398 (666)
Q Consensus 320 ~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d 398 (666)
..|+++++.+ .++..+++.++++++|++.++|+++..|..... .+
T Consensus 225 ~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-----------------------------~~----- 270 (515)
T TIGR03098 225 YVGATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-----------------------------PE----- 270 (515)
T ss_pred HcCCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-----------------------------CC-----
Confidence 9999999887 789999999999999999999999988754100 00
Q ss_pred HHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCC-CCCCCCCccCCccCcEEEE
Q 005991 399 RLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDK-GDNLSGHVGSPNPACEIKL 476 (666)
Q Consensus 399 ~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p~~~~~v~i 476 (666)
....++|.+++||+++++++.+.+++.+ ++.+++.||+||++........ .....+++|+|+++++++|
T Consensus 271 ---------~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i 341 (515)
T TIGR03098 271 ---------SAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYLPPEEVDRRPDSIGKAIPNAEVLV 341 (515)
T ss_pred ---------CCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccccccceEecccccccCCCCCcceecCCCEEEE
Confidence 0114899999999999999999999988 7889999999998754433221 1345689999999999999
Q ss_pred EecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCC-----------CCeeecccEEEEecCCcEEEEccCC
Q 005991 477 VDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDG-----------DGWLHTGDIGLWLPGGRLKIIDRKK 545 (666)
Q Consensus 477 vd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~-----------~gw~~TGDlg~~~~dG~l~i~GR~~ 545 (666)
+| +++..++.++ .|||+++|+.++.|||++++.|++.|.. ++||+|||+|++++||++++.||.|
T Consensus 342 ~~-~~~~~~~~~~---~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~ 417 (515)
T TIGR03098 342 LR-EDGSECAPGE---EGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRD 417 (515)
T ss_pred EC-CCCCCCCCCC---ceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccc
Confidence 99 5666666554 8999999999999999999999877642 3489999999999999999999999
Q ss_pred CeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc------ChhHHHHHHHHcCCCcccccccccC
Q 005991 546 NIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV------DPDVLKDWAASQGIKVIYCFSFRAN 616 (666)
Q Consensus 546 d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~------~~~~l~~~~~~~~l~~~~~~~~~~p 616 (666)
|+||+ +|++|+|.+||+++.+||.|.+|+|++.++. +.+++++++ +.++++++++++ ++ .+++|
T Consensus 418 d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~-l~-----~~~~p 490 (515)
T TIGR03098 418 EMIKT-SGYRVSPTEVEEVAYATGLVAEAVAFGVPDPTLGQAIVLVVTPPGGEELDRAALLAECRAR-LP-----NYMVP 490 (515)
T ss_pred cceec-CCEEeCHHHHHHHHhcCCCeeEEEEEeccCcccCceEEEEEEeCCCCCCCHHHHHHHHHhh-Cc-----cccCC
Confidence 99997 8999999999999999999999999997643 578888874 346889999988 88 89999
Q ss_pred cchhHHH-HHHHHhhhhhhhhhcc
Q 005991 617 SHVIFIA-LIHNLCQLYSSKELFR 639 (666)
Q Consensus 617 ~~i~~v~-~~~~~~gK~~r~~l~~ 639 (666)
..+++++ +|++.+||++|++|++
T Consensus 491 ~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 491 ALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred CEEEEeccCCCCCCCCCcHHHhcc
Confidence 9999995 8888889999999975
No 68
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-65 Score=570.30 Aligned_cols=489 Identities=24% Similarity=0.333 Sum_probs=413.5
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
.-+|+.+.+.+.++.+|+++|+.+. +. .+||.||.++++++|.+|.+.|+++|++|+|+++|+++|+++++
T Consensus 15 ~~~n~~~~~~~~a~~~~~~~a~~~~---~~------~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~ 85 (542)
T PRK07786 15 RRQNWVNQLARHALMQPDAPALRFL---GN------TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVL 85 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEeC---CC------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4578999999999999999999764 33 49999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEeh
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (666)
||+++|++++|+++.++.+++.++++++++++++++......+.......+.++.++..++... ....++
T Consensus 86 a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 155 (542)
T PRK07786 86 AANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSD----------DSVLGY 155 (542)
T ss_pred HHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCc----------ccccCH
Confidence 9999999999999999999999999999999999998776666555445566676666543210 112456
Q ss_pred HHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccccccc-CCCcEEEEcCChHHHHHHHHH
Q 005991 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQF-YPSDIYMSYLPLAHIYERANQ 315 (666)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~-~~~d~~l~~~pl~h~~~~~~~ 315 (666)
+++....... .+......+++++++|||||||.||||++||+++...+......+++ ..++++++.+|++|.+++...
T Consensus 156 ~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 234 (542)
T PRK07786 156 EDLLAEAGPA-HAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGSM 234 (542)
T ss_pred HHHhhccCCC-CCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHHH
Confidence 6665433221 12233456789999999999999999999999998888766666666 578999999999999999888
Q ss_pred HHHHHhCcEEEEec---CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCC
Q 005991 316 IVSVYYGVAVGFYQ---GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT 392 (666)
Q Consensus 316 ~~~l~~G~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~ 392 (666)
+.++..|+++++.+ .++..+++.++++++|.++++|+++..+.......
T Consensus 235 ~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~---------------------------- 286 (542)
T PRK07786 235 LPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQAR---------------------------- 286 (542)
T ss_pred HHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccC----------------------------
Confidence 88999999999865 68999999999999999999999999886531100
Q ss_pred CChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCCCC--CCCCCccCCc
Q 005991 393 PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGD--NLSGHVGSPN 469 (666)
Q Consensus 393 ~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~ 469 (666)
. ...++|.+++||+++++++.+.+++.+ ++++++.||+||++.+.+...... ...+++|+|+
T Consensus 287 ~---------------~~~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~ 351 (542)
T PRK07786 287 P---------------RDLALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVI 351 (542)
T ss_pred c---------------cCcceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCcccccccCCCccccC
Confidence 0 002689999999999999999999888 789999999999987655433222 3557899999
Q ss_pred cCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEE
Q 005991 470 PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (666)
Q Consensus 470 ~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ik 549 (666)
++++++|+| ++++.++.+. .|||+++|+.++.||+++++.|++.| .+|||+|||+++++++|.++++||.||+||
T Consensus 352 ~~~~~~i~d-~~~~~~~~g~---~Gel~v~g~~~~~gy~~~~~~~~~~f-~~~~~~TGDl~~~~~~g~~~i~GR~~d~i~ 426 (542)
T PRK07786 352 PTVAARVVD-ENMNDVPVGE---VGEIVYRAPTLMSGYWNNPEATAEAF-AGGWFHSGDLVRQDEEGYVWVVDRKKDMII 426 (542)
T ss_pred CCceEEEEC-CCCCCCcCCC---ceEEEEEChhhhhhhcCCHHHHHHHh-hCCcccccceEEEcCCceEEEEecccceEE
Confidence 999999999 5666666554 89999999999999999999999999 689999999999999999999999999999
Q ss_pred cCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC-------hhHHHHHHHHcCCCcccccccccCcch
Q 005991 550 LAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD-------PDVLKDWAASQGIKVIYCFSFRANSHV 619 (666)
Q Consensus 550 l~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~-------~~~l~~~~~~~~l~~~~~~~~~~p~~i 619 (666)
+ +|++|+|.+||+++.+||.|.+|+|++.+++ +.++++|++. .+++.++++++ ++ .|++|..+
T Consensus 427 ~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~-l~-----~~~~P~~i 499 (542)
T PRK07786 427 S-GGENIYCAEVENVLASHPDIVEVAVIGRADEKWGEVPVAVAAVRNDDAALTLEDLAEFLTDR-LA-----RYKHPKAL 499 (542)
T ss_pred e-CCEEECHHHHHHHHHhCCCccEEEEEeccCcccCceEEEEEEECCCCCCCCHHHHHHHHHhh-cc-----CCCCCCEE
Confidence 7 8999999999999999999999999997643 5788888754 25688999988 88 89999999
Q ss_pred hHHH-HHHHHhhhhhhhhhccc
Q 005991 620 IFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 620 ~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
.+++ +|++.+||++|++|++.
T Consensus 500 ~~v~~iP~t~~GKv~r~~L~~~ 521 (542)
T PRK07786 500 EIVDALPRNPAGKVLKTELRER 521 (542)
T ss_pred EEeccCCCCCcccccHHHHHHH
Confidence 9995 77888899999999887
No 69
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=5.1e-65 Score=568.51 Aligned_cols=491 Identities=20% Similarity=0.287 Sum_probs=407.0
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
.|+.++|++.++++||++|+.+. ++ +.+||+||.++++++|++|++.|+++||+|+++++|+++|+++++||
T Consensus 23 ~~l~~~~~~~~~~~pd~~a~~~~---~~-----~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~ 94 (547)
T PRK06087 23 ASLADYWQQTARAMPDKIAVVDN---HG-----ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLAC 94 (547)
T ss_pred CCHHHHHHHHHHHCCCceEEEcC---CC-----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 57999999999999999999753 22 35999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccc-----cHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEE
Q 005991 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQ-----TLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKL 233 (666)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~-----~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~ 233 (666)
+++|++++|+++.++.+++.++++.+++++++++.. ..+.+.+....++.++.++.++...... ..
T Consensus 95 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 165 (547)
T PRK06087 95 LKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPAT---------SS 165 (547)
T ss_pred HHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCc---------Cc
Confidence 999999999999999999999999999999999753 2334444445566666777665432110 11
Q ss_pred EehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHH
Q 005991 234 ISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERA 313 (666)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~ 313 (666)
.++.++....... .......++++++|+|||||||.||||++||+++......+...+++.++|++++.+|++|.+++.
T Consensus 166 ~~~~~~~~~~~~~-~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~ 244 (547)
T PRK06087 166 LSLSQIIADYEPL-TTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFL 244 (547)
T ss_pred cCHHHHhccCCcc-cCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHH
Confidence 2455544332221 122335678999999999999999999999999988877777777889999999999999999976
Q ss_pred H-HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCC
Q 005991 314 N-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQ 391 (666)
Q Consensus 314 ~-~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~ 391 (666)
. .+.+++.|+++++.+ .++..+++.++++++|+++++|..+..++......
T Consensus 245 ~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~--------------------------- 297 (547)
T PRK06087 245 HGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQ--------------------------- 297 (547)
T ss_pred HHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccC---------------------------
Confidence 5 567889999999887 79999999999999999998888776665421100
Q ss_pred CCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCC--CCCCCccCCc
Q 005991 392 TPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD--NLSGHVGSPN 469 (666)
Q Consensus 392 ~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~ 469 (666)
....+++|.+++||+++++++.+.+.. +|+++++.||+||++...+...... ...+++|.|+
T Consensus 298 ---------------~~~~~~lr~i~~gG~~~~~~~~~~~~~-~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~ 361 (547)
T PRK06087 298 ---------------PADLSALRFFLCGGTTIPKKVARECQQ-RGIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAA 361 (547)
T ss_pred ---------------CCCCCCeEEEEEcCCCCCHHHHHHHHH-cCCcEEEEecccccCCccccCCCcchhhcCCcCCccC
Confidence 000148999999999999999998877 4999999999999987655433221 2346789999
Q ss_pred cCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEE
Q 005991 470 PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (666)
Q Consensus 470 ~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ik 549 (666)
++++++++| +++..++.+. .|||+++|+.++.||+++++.+.+.|+.+|||+|||+|+++++|+++++||.+|+|+
T Consensus 362 ~~~~~~i~d-~~~~~~~~g~---~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~ 437 (547)
T PRK06087 362 AGVEIKVVD-EARKTLPPGC---EGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIV 437 (547)
T ss_pred CCceEEEEc-CCCCCCcCCC---cceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhhh
Confidence 999999999 5666666554 899999999999999999999999998899999999999999999999999999999
Q ss_pred cCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh-------hHHHHHHHHcCCCcccccccccCcch
Q 005991 550 LAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP-------DVLKDWAASQGIKVIYCFSFRANSHV 619 (666)
Q Consensus 550 l~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~-------~~l~~~~~~~~l~~~~~~~~~~p~~i 619 (666)
+ +|++|+|.+||+++.++|+|.+++|++.+++ +.++++|+++. +++.+++.+..++ .+++|..|
T Consensus 438 ~-~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~P~~i 511 (547)
T PRK06087 438 R-GGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLTLEEVVAFFSRKRVA-----KYKYPEHI 511 (547)
T ss_pred c-CCEEECHHHHHHHHHhCCCeeEEEEEecCCCCcCceEEEEEEECCCCCCCCHHHHHHHHHhcccc-----ccCCCeEE
Confidence 6 8999999999999999999999999997644 57888888643 5667776654477 99999999
Q ss_pred hHHH-HHHHHhhhhhhhhhccc
Q 005991 620 IFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 620 ~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
.+++ +|++.+||++|++|++.
T Consensus 512 ~~v~~iP~t~sGK~~r~~l~~~ 533 (547)
T PRK06087 512 VVIDKLPRTASGKIQKFLLRKD 533 (547)
T ss_pred EEeccCCCCCCCcCcHHHHHHH
Confidence 9995 88888899999999876
No 70
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=7.7e-65 Score=568.95 Aligned_cols=496 Identities=24% Similarity=0.351 Sum_probs=408.7
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
...++.++|.+.++++||++|+.+. ++. +.+||+||.++++++|..|.+.|+++|++|+++++|+++|+++++
T Consensus 14 ~~~~l~~~l~~~~~~~~~~~ai~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~l 86 (559)
T PRK08315 14 LEQTIGQLLDRTAARYPDREALVYR---DQG----LRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQF 86 (559)
T ss_pred hhccHHHHHHHHHHHCCCCeEEEEc---CCC----eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHH
Confidence 3458999999999999999999875 322 469999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccH-----HHHHHhhhc-------------CCCceEEEEeCCC
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTL-----NTLLSFISE-------------IPSVHLIVVVGGK 218 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~-------------~~~l~~ii~~~~~ 218 (666)
||+++|++++|+++.++.+++..+++.+++++++++.... ..+.+.... .+..+.++.++..
T Consensus 87 a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (559)
T PRK08315 87 ATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDE 166 (559)
T ss_pred HHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeeccc
Confidence 9999999999999999999999999999999999986532 122222111 1334444444331
Q ss_pred CCCCCCCCCCCCcEEEehHHHHhcCCCC-----CCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccc
Q 005991 219 DEHLPSLPSTSGVKLISYLQLQSQGCSS-----PQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQ 293 (666)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~ 293 (666)
. ......+.++....... ........++++++++|||||||.||||.+||+++...+......++
T Consensus 167 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~ 236 (559)
T PRK08315 167 K----------HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMK 236 (559)
T ss_pred C----------CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcC
Confidence 1 11124555554432110 01122345789999999999999999999999999988887777788
Q ss_pred cCCCcEEEEcCChHHHHHHHH-HHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcch
Q 005991 294 FYPSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGT 370 (666)
Q Consensus 294 ~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 370 (666)
+.++|+++..+|++|.+++.. ++.++..|+++++.. .++..+++.++++++|++.++|+++..+.......
T Consensus 237 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~------ 310 (559)
T PRK08315 237 LTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFA------ 310 (559)
T ss_pred CCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccC------
Confidence 999999999999999999876 667899999998654 69999999999999999999999998765421000
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCc-cccCcccchhh
Q 005991 371 LREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQ-VMEGYGMTETS 449 (666)
Q Consensus 371 ~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~-v~~~YG~TE~~ 449 (666)
....+++|.+++||+++++++.+.+.+.++.. +++.||+||++
T Consensus 311 ------------------------------------~~~~~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~ 354 (559)
T PRK08315 311 ------------------------------------RFDLSSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETS 354 (559)
T ss_pred ------------------------------------CCCchhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccc
Confidence 00014799999999999999999998888654 99999999998
Q ss_pred hhhhccCCCC---CCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeec
Q 005991 450 CIISAIDKGD---NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHT 526 (666)
Q Consensus 450 ~~~~~~~~~~---~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~T 526 (666)
.+++...... ....++|+|+++++++|+|.++++.++.++ .|||+|+|++++.|||++|+.+++.|..++||+|
T Consensus 355 ~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~---~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~T 431 (559)
T PRK08315 355 PVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGE---QGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHT 431 (559)
T ss_pred cceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCC---ceEEEEECchhhhhhcCChhHHhhcCCCCCCEEc
Confidence 7665443322 356789999999999999966577776665 8999999999999999999999999978999999
Q ss_pred ccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc------ChhHHH
Q 005991 527 GDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV------DPDVLK 597 (666)
Q Consensus 527 GDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~------~~~~l~ 597 (666)
||+|++++||.++|+||.+|+||+ +|++|+|.+||+++.++|+|.+++|++.+++ +.++++|++ +.++++
T Consensus 432 GD~~~~~~dg~~~~~GR~d~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 510 (559)
T PRK08315 432 GDLAVMDEEGYVNIVGRIKDMIIR-GGENIYPREIEEFLYTHPKIQDVQVVGVPDEKYGEEVCAWIILRPGATLTEEDVR 510 (559)
T ss_pred cceEEEcCCceEEEEeeccceEEE-CCEEEcHHHHHHHHHhCCCceEEEEEecCCCCCCeEEEEEEEeCCCCCCCHHHHH
Confidence 999999999999999999999996 8999999999999999999999999997654 567888875 346889
Q ss_pred HHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccch
Q 005991 598 DWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRSR 641 (666)
Q Consensus 598 ~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~~ 641 (666)
++++++ ++ .|++|..+.+++ +|.+.+||++|++|++.-
T Consensus 511 ~~l~~~-l~-----~~~~P~~i~~v~~lP~t~~GK~~r~~L~~~~ 549 (559)
T PRK08315 511 DFCRGK-IA-----HYKIPRYIRFVDEFPMTVTGKIQKFKMREMM 549 (559)
T ss_pred HHHHhh-cc-----cccCCcEEEEcccCCCCCCCceeHHHHHHHH
Confidence 999988 88 899999999996 778888999999998763
No 71
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.1e-64 Score=560.65 Aligned_cols=484 Identities=25% Similarity=0.368 Sum_probs=404.4
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
.++.+++..++ .+|+++|+... ++ +.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++||
T Consensus 3 ~~l~~~~~~~~-~~~~~~a~~~~---~~-----~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~ 73 (504)
T PRK07514 3 NNLFDALRAAF-ADRDAPFIETP---DG-----LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLAT 73 (504)
T ss_pred ccHHHHHHHHh-hCCCCeEEEeC---CC-----CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 57899999999 99999999653 22 46999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHH
Q 005991 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQ 238 (666)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (666)
+++|++++|+++.++.+++..+++.+++++++++......+....... ....++.++.... ..+.+
T Consensus 74 ~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------------~~~~~ 139 (504)
T PRK07514 74 LRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAA-GAPHVETLDADGT-------------GSLLE 139 (504)
T ss_pred HHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhcc-CCceEEEecCCCc-------------ccHHH
Confidence 999999999999999999999999999999999987766655443322 2232444433110 01111
Q ss_pred HHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHH-HHH
Q 005991 239 LQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-QIV 317 (666)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~ 317 (666)
..... ..........++++++|+|||||||.||||.+||+++...+......+++.++|++++.+|++|.+++.. .+.
T Consensus 140 ~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~ 218 (504)
T PRK07514 140 AAAAA-PDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNV 218 (504)
T ss_pred hhhhc-CcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHH
Confidence 11111 0111123456899999999999999999999999999998877777788899999999999999999876 567
Q ss_pred HHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChh
Q 005991 318 SVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKM 396 (666)
Q Consensus 318 ~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~ 396 (666)
+++.|+++++.+ .++..+++.+ .++|++.++|.++..++.....
T Consensus 219 ~l~~G~~~~~~~~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~--------------------------------- 263 (504)
T PRK07514 219 ALLAGASMIFLPKFDPDAVLALM--PRATVMMGVPTFYTRLLQEPRL--------------------------------- 263 (504)
T ss_pred HHhcCcEEEECCCCCHHHHHHHH--HhheeeecHHHHHHHHHcCCCC---------------------------------
Confidence 899999999887 6899999988 4799999999999887642000
Q ss_pred hhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCccCcEEEE
Q 005991 397 WDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKL 476 (666)
Q Consensus 397 ~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~i 476 (666)
.....+++|.+++||+++++++.+.|++.+++++++.||+||++..++.........+++|.|+++++++|
T Consensus 264 ---------~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~~~~v~i 334 (504)
T PRK07514 264 ---------TREAAAHMRLFISGSAPLLAETHREFQERTGHAILERYGMTETNMNTSNPYDGERRAGTVGFPLPGVSLRV 334 (504)
T ss_pred ---------CcccccceeeEEecCCCCCHHHHHHHHHHhCCcceeecccccccccccCCccccccCcccccCCCCcEEEE
Confidence 00011489999999999999999999998999999999999998655433333345678999999999999
Q ss_pred EecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeee
Q 005991 477 VDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYV 556 (666)
Q Consensus 477 vd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v 556 (666)
+|++++..++.++ .|||+|+|++++.||+++++.+++.|..+|||+|||+|+++++|.++++||+||+||+ +|++|
T Consensus 335 ~d~~~~~~~~~g~---~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~-~G~~i 410 (504)
T PRK07514 335 TDPETGAELPPGE---IGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLIIS-GGYNV 410 (504)
T ss_pred EECCCCCCCCCCC---ceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcCCccEEEeccccceEEe-CCeEE
Confidence 9977777776665 8999999999999999999999999988999999999999999999999999999997 89999
Q ss_pred ccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcchhHHH-HHH
Q 005991 557 APEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIH 626 (666)
Q Consensus 557 ~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~ 626 (666)
+|.+||+++.++++|.+++|++.+++ +.+++++++. .+++.++++++ ++ .+++|..+++++ +|+
T Consensus 411 ~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-l~-----~~~~p~~i~~v~~~p~ 484 (504)
T PRK07514 411 YPKEVEGEIDELPGVVESAVIGVPHPDFGEGVTAVVVPKPGAALDEAAILAALKGR-LA-----RFKQPKRVFFVDELPR 484 (504)
T ss_pred CHHHHHHHHHhCCCeeEEEEEeCCCCCcCceEEEEEEECCCCCCCHHHHHHHHHhh-cc-----cCCCCcEEEEeccCCC
Confidence 99999999999999999999997653 5688888863 46889999988 88 899999999885 778
Q ss_pred HHhhhhhhhhhccc
Q 005991 627 NLCQLYSSKELFRS 640 (666)
Q Consensus 627 ~~~gK~~r~~l~~~ 640 (666)
+.+||++|++|++.
T Consensus 485 t~~gK~~r~~l~~~ 498 (504)
T PRK07514 485 NTMGKVQKNLLREQ 498 (504)
T ss_pred CCCcceeHHHHHHH
Confidence 88899999999765
No 72
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-64 Score=567.17 Aligned_cols=492 Identities=24% Similarity=0.358 Sum_probs=404.1
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
.++.++|.+.++++|+++|+++. ++ .+.+||+||.++++++|.+|.+.|+++|++|+++++|+++|+++++||
T Consensus 18 ~~l~~~l~~~~~~~p~~~a~~~~---~~----~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~ 90 (558)
T PRK12583 18 QTIGDAFDATVARFPDREALVVR---HQ----ALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFAT 90 (558)
T ss_pred CcHHHHHHHHHHHCCCCeEEEec---CC----CcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHH
Confidence 58999999999999999999875 22 246999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccH-----HHHHHhhhc-------------CCCceEEEEeCCCCC
Q 005991 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTL-----NTLLSFISE-------------IPSVHLIVVVGGKDE 220 (666)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~-------------~~~l~~ii~~~~~~~ 220 (666)
+++|++++|+++.++.+++.+++++++++++|+++... ..+.+.... ++.++.++..+....
T Consensus 91 ~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (558)
T PRK12583 91 ARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPP 170 (558)
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCC
Confidence 99999999999999999999999999999999976431 222222111 233344444332210
Q ss_pred CCCCCCCCCCcEEEehHHHHhcCCCC-----CCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccC
Q 005991 221 HLPSLPSTSGVKLISYLQLQSQGCSS-----PQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFY 295 (666)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~ 295 (666)
.....|++....+... ........++++++++|||||||.||||.+||+++.+.+......+++.
T Consensus 171 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~ 240 (558)
T PRK12583 171 ----------PGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLT 240 (558)
T ss_pred ----------ccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCC
Confidence 0122344443322110 0111234578999999999999999999999999998888777778889
Q ss_pred CCcEEEEcCChHHHHHHHH-HHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHH
Q 005991 296 PSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLR 372 (666)
Q Consensus 296 ~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~ 372 (666)
++|++++.+|++|.++... .+.++..|+++++.. .++..+++.++++++|++.++|+++..+.......
T Consensus 241 ~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-------- 312 (558)
T PRK12583 241 EHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRG-------- 312 (558)
T ss_pred CCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcccccc--------
Confidence 9999999999999999876 567788999988754 68999999999999999999999987665421000
Q ss_pred HHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhC-CccccCcccchhhhh
Q 005991 373 EKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG-CQVMEGYGMTETSCI 451 (666)
Q Consensus 373 ~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~v~~~YG~TE~~~~ 451 (666)
+ . -.+++|.+++||+++++++.+++.+.++ ..+.+.||+||++.+
T Consensus 313 -----------------~------~-----------~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~ 358 (558)
T PRK12583 313 -----------------N------F-----------DLSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPV 358 (558)
T ss_pred -----------------C------C-----------CchhheEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccc
Confidence 0 0 0137999999999999999999988775 579999999999987
Q ss_pred hhccCCC---CCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeeccc
Q 005991 452 ISAIDKG---DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGD 528 (666)
Q Consensus 452 ~~~~~~~---~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGD 528 (666)
++..... .....++|+|.++++++|+|++ +..++.++ .|||+++|+.++.||+++++.+.+.|+.+|||+|||
T Consensus 359 ~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~-~~~~~~g~---~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD 434 (558)
T PRK12583 359 SLQTTAADDLERRVETVGRTQPHLEVKVVDPD-GATVPRGE---IGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGD 434 (558)
T ss_pred eeccCcccccccccCCCCccCCCCeEEEECCC-CCCCCCCC---eeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccc
Confidence 6654322 2356789999999999999954 66666665 899999999999999999999999887899999999
Q ss_pred EEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHH
Q 005991 529 IGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDW 599 (666)
Q Consensus 529 lg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~ 599 (666)
+|++++||++++.||+||+||+ +|++|+|.+||+++.++|+|.+++|++.++. +.++++|+++ .++++++
T Consensus 435 l~~~~~dg~l~i~GR~~~~i~~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~ 513 (558)
T PRK12583 435 LATMDEQGYVRIVGRSKDMIIR-GGENIYPREIEEFLFTHPAVADVQVFGVPDEKYGEEIVAWVRLHPGHAASEEELREF 513 (558)
T ss_pred eEEECCCccEEEEecccceeEE-CCEEeCHHHHHHHHHhCCCeeEEEEEeeecCCCCcEEEEEEEECCCCCCCHHHHHHH
Confidence 9999999999999999999996 8999999999999999999999999997653 5788888753 4688999
Q ss_pred HHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 600 AASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 600 ~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
++++ |+ .+++|..+.+++ +|++.+||++|++|++.
T Consensus 514 ~~~~-L~-----~~~~P~~i~~v~~lP~t~sGK~~r~~L~~~ 549 (558)
T PRK12583 514 CKAR-IA-----HFKVPRYFRFVDEFPMTVTGKVQKFRMREI 549 (558)
T ss_pred HHhh-cc-----cCcCCcEEEEeccCCCCCCCCccHHHHHHH
Confidence 9988 88 899999999885 88888899999999876
No 73
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-64 Score=561.82 Aligned_cols=496 Identities=25% Similarity=0.383 Sum_probs=424.1
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
...++.++|.+.++.+|+++|+.+. ++ .+||+||+++++++|+.|.+.|+++|++|+++++|+++++++++
T Consensus 4 ~~~~l~~~l~~~~~~~p~~~a~~~~---~~------~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~l 74 (521)
T PRK06187 4 YPLTIGRILRHGARKHPDKEAVYFD---GR------RTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYF 74 (521)
T ss_pred ccCCHHHHHHHHHHHCCCceEEEeC---Cc------eEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 3468999999999999999999764 33 39999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEeh
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (666)
||+++|++++|+++.++.+++..+++.+++++++++....+.+.+....++.++.++.+++.... .......++
T Consensus 75 a~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 148 (521)
T PRK06187 75 AVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAA------PLAPEVGEY 148 (521)
T ss_pred HHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCcccc------ccccccccH
Confidence 99999999999999999999999999999999999998888887777777777777776654321 111223556
Q ss_pred HHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHH
Q 005991 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQI 316 (666)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~ 316 (666)
.++....... .......++++++++|||||||.||+|.+||+++..........+++.++|++++.+|++|.+++...+
T Consensus 149 ~~~~~~~~~~-~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 227 (521)
T PRK06187 149 EELLAAASDT-FDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLPY 227 (521)
T ss_pred HHHhhcCCcc-CCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHHH
Confidence 6665543321 223345678999999999999999999999999998888777788899999999999999999998877
Q ss_pred HHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCCh
Q 005991 317 VSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSK 395 (666)
Q Consensus 317 ~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~ 395 (666)
.++..|+++++.+ .++..+++.++++++|+++++|+++..|.......
T Consensus 228 ~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~------------------------------- 276 (521)
T PRK06187 228 LALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAY------------------------------- 276 (521)
T ss_pred HHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCC-------------------------------
Confidence 7999999999887 68999999999999999999999999887632110
Q ss_pred hhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCC------CCCCccCCc
Q 005991 396 MWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDN------LSGHVGSPN 469 (666)
Q Consensus 396 ~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~------~~~~vG~p~ 469 (666)
.....++|.+++||+++++++.+.+.+.+++++++.||+||++.++........ ..+++|.|+
T Consensus 277 -----------~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 345 (521)
T PRK06187 277 -----------FVDFSSLRLVIYGGAALPPALLREFKEKFGIDLVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPL 345 (521)
T ss_pred -----------ccCcchhhEEEEcCcCCCHHHHHHHHHHhCcchheeeccCccCcccccCCcccccccccccCCcccccc
Confidence 000147999999999999999999999889999999999999876665544333 567899999
Q ss_pred cCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEE
Q 005991 470 PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (666)
Q Consensus 470 ~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ik 549 (666)
++++++|+| +++..++.+ ++..|||+++|+.++.||+++++.+.+.| .++||+|||+|+++++|.+++.||.+|+||
T Consensus 346 ~~~~~~i~~-~~~~~~~~~-~g~~Gel~v~~~~~~~~y~~~~~~~~~~~-~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~ 422 (521)
T PRK06187 346 PGVEARIVD-DDGDELPPD-GGEVGEIIVRGPWLMQGYWNRPEATAETI-DGGWLHTGDVGYIDEDGYLYITDRIKDVII 422 (521)
T ss_pred CCeEEEEEC-CCCCCCCCC-CCCeeEEEEECcchhhhhcCCHHHHHHHh-hCCceeccceEEEcCCCCEEEeecccceEE
Confidence 999999999 555655551 13489999999999999999999999998 678999999999999999999999999999
Q ss_pred cCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc------ChhHHHHHHHHcCCCcccccccccCcchh
Q 005991 550 LAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV------DPDVLKDWAASQGIKVIYCFSFRANSHVI 620 (666)
Q Consensus 550 l~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~------~~~~l~~~~~~~~l~~~~~~~~~~p~~i~ 620 (666)
+ +|.+|+|.+||+++.++++|.+++|++.+++ +.+++++++ ++++++++++++ ++ .+++|..+.
T Consensus 423 ~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~-l~-----~~~~p~~i~ 495 (521)
T PRK06187 423 S-GGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGERPVAVVVLKPGATLDAKELRAFLRGR-LA-----KFKLPKRIA 495 (521)
T ss_pred c-CCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCceEEEEEEECCCCCCCHHHHHHHHHHh-cc-----CCCCceEEE
Confidence 7 8999999999999999999999999987543 578888885 357889999888 88 899999999
Q ss_pred HHH-HHHHHhhhhhhhhhccc
Q 005991 621 FIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 621 ~v~-~~~~~~gK~~r~~l~~~ 640 (666)
+++ +|++.+||++|..|++.
T Consensus 496 ~v~~~P~t~~gK~~r~~l~~~ 516 (521)
T PRK06187 496 FVDELPRTSVGKILKRVLREQ 516 (521)
T ss_pred EccCCCCCCCCCeeHHHHHHH
Confidence 985 88888899999998764
No 74
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.6e-64 Score=574.75 Aligned_cols=501 Identities=18% Similarity=0.147 Sum_probs=383.1
Q ss_pred HHHHHHHHHHhCCCCceEEEEEeccCc--cCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 81 LHDNFIYAVENYPDYKYLGTRVRVDGT--VGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 81 l~~~~~~~a~~~pd~~al~~~~~~~~~--~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
...+|.+.++++||++|+++. +.. .++.+.+||+||.++++++|++|+++|+++||+|+++++|++|+++++|||
T Consensus 177 ~~~~l~~~~~~~pd~~Ai~~~---~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~ 253 (728)
T PLN03052 177 AECCLTPKPSKTDDSIAIIWR---DEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAI 253 (728)
T ss_pred HHHHHHHHhccCCCCeEEEEE---CCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 345666666678999999886 321 124578999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccH------HHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcE
Q 005991 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTL------NTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVK 232 (666)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~ 232 (666)
+++|++++|+++.++++++.+++++++++++|+++... +...+...... ..++++........... ...
T Consensus 254 ~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~--~~~iv~~~~~~~~~~~~---~~~ 328 (728)
T PLN03052 254 ILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKA--PKAIVLPADGKSVRVKL---REG 328 (728)
T ss_pred HHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcC--CcEEEEeCCCCcccccc---ccC
Confidence 99999999999999999999999999999999986432 11111111111 12333322110000000 001
Q ss_pred EEehHHHHhcCCCC----CCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHH
Q 005991 233 LISYLQLQSQGCSS----PQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAH 308 (666)
Q Consensus 233 ~~~~~~~~~~~~~~----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h 308 (666)
..+|++++...... ..+.....++++++|+|||||||.||||+++|++++..+......+++.++|++++++|+.|
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~~~~~~l~w 408 (728)
T PLN03052 329 DMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCWPTNLGW 408 (728)
T ss_pred CccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEEEECCCcHH
Confidence 24577765433211 11111235689999999999999999999999998776655555578889999999999999
Q ss_pred HHHHHHHHHHHHhCcEEEEecC--CHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH
Q 005991 309 IYERANQIVSVYYGVAVGFYQG--DNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQA 386 (666)
Q Consensus 309 ~~~~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~ 386 (666)
+++...++.+|..|++++++++ ++..+++.++++++|++.++|+++..|.+...
T Consensus 409 ~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~------------------------ 464 (728)
T PLN03052 409 MMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNC------------------------ 464 (728)
T ss_pred HhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCC------------------------
Confidence 9998777899999999999974 55789999999999999999999988755200
Q ss_pred HHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhC-CccccCcccchhhhhhhccCC-CCCCCCC
Q 005991 387 IVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG-CQVMEGYGMTETSCIISAIDK-GDNLSGH 464 (666)
Q Consensus 387 ~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~v~~~YG~TE~~~~~~~~~~-~~~~~~~ 464 (666)
..-+| + ++||.+++||++++++...++...++ .++.+.||+||+++.+....+ .....++
T Consensus 465 -------~~~~d---l--------ssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~ 526 (728)
T PLN03052 465 -------MAGLD---W--------SSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAA 526 (728)
T ss_pred -------cccCC---h--------hheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCc
Confidence 00000 0 48999999999999999888777665 579999999999765443322 2345688
Q ss_pred ccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCC--cCccccCChhhhhhccC------CCCeeecccEEEEecCC
Q 005991 465 VGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPI--VFQGYYKNEVQTREVID------GDGWLHTGDIGLWLPGG 536 (666)
Q Consensus 465 vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~--v~~GY~~~~~~t~~~~~------~~gw~~TGDlg~~~~dG 536 (666)
+|.|.+|++++|+| ++++.++.+.+ ..|||+++++. ...+|+++. .+...|. +++||+|||+|++|+||
T Consensus 527 ~g~p~~g~~v~v~d-~~g~~v~~g~~-~~GEL~v~~~~~~~~~~~~~~~-~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG 603 (728)
T PLN03052 527 FSTPAMGCKLFILD-DSGNPYPDDAP-CTGELALFPLMFGASSTLLNAD-HYKVYFKGMPVFNGKILRRHGDIFERTSGG 603 (728)
T ss_pred cccCCCCceEEEEC-CCCCCCCCCCC-ceEEEEEeCCCCCCCccccCch-hhhhhhhcCCCCCCCEEEecCceEEECCCC
Confidence 99999999999999 66776665532 26999998753 345677764 3333331 23499999999999999
Q ss_pred cEEEEccCCCeEEcCCeeeeccHHHHHHH-hcCcCcceEEEEEeCCC----CeEEEEEEcC--------hhHHHHHHHHc
Q 005991 537 RLKIIDRKKNIFKLAQGEYVAPEKIENVY-AKCKFVLQCFIYGDSFN----SCLVAIVAVD--------PDVLKDWAASQ 603 (666)
Q Consensus 537 ~l~i~GR~~d~ikl~~G~~v~p~eIE~~l-~~~p~V~~~~V~g~~~~----~~~va~vv~~--------~~~l~~~~~~~ 603 (666)
+++|+||.||+||+ +|+||+|.|||+++ ..||.|.+|+|+|.++. +.++++|++. .+++++++++.
T Consensus 604 ~l~i~GR~Dd~I~~-~G~rI~~~EIE~~l~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~~~~~~~L~~~i~~~ 682 (728)
T PLN03052 604 YYRAHGRADDTMNL-GGIKVSSVEIERVCNAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPGSNPDLNELKKIFNSA 682 (728)
T ss_pred eEEEEecCCCEEee-CCEEeCHHHHHHHHHhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 99999999999997 89999999999999 58999999999997643 5789999864 25666665433
Q ss_pred ---CCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 604 ---GIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 604 ---~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
.++ .+.+|+.|++++ +|+|.+||++|+.|++.
T Consensus 683 i~~~l~-----~~~~p~~i~~v~~lP~T~sGKi~Rr~Lr~~ 718 (728)
T PLN03052 683 IQKKLN-----PLFKVSAVVIVPSFPRTASNKVMRRVLRQQ 718 (728)
T ss_pred HHhhcC-----CccCCCEEEEcCCCCCCCchHHHHHHHHHH
Confidence 155 788899999995 88999999999999875
No 75
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2e-65 Score=567.96 Aligned_cols=467 Identities=21% Similarity=0.264 Sum_probs=363.3
Q ss_pred HHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHh
Q 005991 81 LHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSA 160 (666)
Q Consensus 81 l~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~ 160 (666)
+.+.|+++++++|+++|+.+. + .+.++++||+||.++++++|++|.++ ++||+|+|+++|+++|++++|||++
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~---~--~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~ 76 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDR---E--SGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWL 76 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCC---C--CCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHH
Confidence 789999999999999999754 2 23468899999999999999999988 8999999999999999999999999
Q ss_pred cCCeEEecCCC--------CCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcE
Q 005991 161 YSYISVPLYDT--------LGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVK 232 (666)
Q Consensus 161 ~G~~~vpl~~~--------~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~ 232 (666)
+|++++ +++. ...+++.+++++++++++|++......+...... +.+.+.
T Consensus 77 ~G~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~-------~~~~~~-------------- 134 (525)
T PRK05851 77 AGAAVS-ILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS-------VTVHDL-------------- 134 (525)
T ss_pred cCCCCc-CCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc-------cccccc--------------
Confidence 999865 4332 2235666789999999999987665444332111 001000
Q ss_pred EEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccC-CCcEEEEcCChHHHHH
Q 005991 233 LISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFY-PSDIYMSYLPLAHIYE 311 (666)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~-~~d~~l~~~pl~h~~~ 311 (666)
......... .+.....++++++|+|||||||.||||++||+++.+.+......+++. ++|++++++|++|+++
T Consensus 135 ----~~~~~~~~~--~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 208 (525)
T PRK05851 135 ----ATAAHTNRS--ASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMG 208 (525)
T ss_pred ----ccccccccc--ccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCcc
Confidence 000000000 011224678999999999999999999999999999888877778888 8999999999999999
Q ss_pred HHHHHHHHHhCcEEEEec---C--CHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH
Q 005991 312 RANQIVSVYYGVAVGFYQ---G--DNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQA 386 (666)
Q Consensus 312 ~~~~~~~l~~G~~~~~~~---~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~ 386 (666)
+...+.+++.|+++++.+ + ++..+++.++++++|++...|.++..+... .....
T Consensus 209 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~-~~~~~-------------------- 267 (525)
T PRK05851 209 LAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKY-ARRVS-------------------- 267 (525)
T ss_pred HHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHh-hcccc--------------------
Confidence 988888999999999876 2 678899999999999885544444333221 00000
Q ss_pred HHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHH---hCC---ccccCcccchhhhhhhccCCC--
Q 005991 387 IVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVC---FGC---QVMEGYGMTETSCIISAIDKG-- 458 (666)
Q Consensus 387 ~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~---~~~---~v~~~YG~TE~~~~~~~~~~~-- 458 (666)
....+++|.+++||+++++++.+.|.+. +|. .+++.||+||++..++...+.
T Consensus 268 --------------------~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~ 327 (525)
T PRK05851 268 --------------------DVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIG 327 (525)
T ss_pred --------------------CCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCC
Confidence 0000379999999999999999988764 454 499999999998655443221
Q ss_pred -------------CCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeee
Q 005991 459 -------------DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLH 525 (666)
Q Consensus 459 -------------~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~ 525 (666)
....+++|+|++|++++|+|.++...++.+ +.|||+|+|++++.|||++|+.+ .+|||+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g---~~GEl~v~g~~~~~GY~~~~~~~-----~~~~~~ 399 (525)
T PRK05851 328 LRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGR---EIGEIEIRGASMMSGYLGQAPID-----PDDWFP 399 (525)
T ss_pred ceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCC---CeEEEEEecCchhhccccCCccC-----CCCcee
Confidence 123468999999999999995444445544 48999999999999999998643 578999
Q ss_pred cccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc-----ChhHHH
Q 005991 526 TGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV-----DPDVLK 597 (666)
Q Consensus 526 TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~-----~~~~l~ 597 (666)
|||+|+++ +|.|+|+||+||+||+ +|++|+|.|||++|.+||+|.+|+|++.+++ +.+.++|+. +.++++
T Consensus 400 TGDl~~~~-~G~l~~~GR~dd~i~~-~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 477 (525)
T PRK05851 400 TGDLGYLV-DGGLVVCGRAKELITV-AGRNIFPTEIERVAAQVRGVREGAVVAVGTGEGSARPGLVIAAEFRGPDEAGAR 477 (525)
T ss_pred ccceEEEE-CCEEEEEeecCCEEEE-CCEEeCHHHHHHHHHhCCCcccceEEEEEecCCCCceeEEEEEEecCcchHHHH
Confidence 99999996 8999999999999997 8999999999999999999999999986543 345555542 346677
Q ss_pred HHHHHcCCCccccccc--ccCcchhHHH---HHHHHhhhhhhhhhcc
Q 005991 598 DWAASQGIKVIYCFSF--RANSHVIFIA---LIHNLCQLYSSKELFR 639 (666)
Q Consensus 598 ~~~~~~~l~~~~~~~~--~~p~~i~~v~---~~~~~~gK~~r~~l~~ 639 (666)
++++++ ++ .+ ++|+.+.+++ +|++.+||++|++|++
T Consensus 478 ~~~~~~-l~-----~~l~~~P~~~~~v~~~~lP~t~~GKi~r~~L~~ 518 (525)
T PRK05851 478 SEVVQR-VA-----SECGVVPSDVVFVAPGSLPRTSSGKLRRLAVKR 518 (525)
T ss_pred HHHHHH-HH-----HHhCCCccEEEEECCCCcCcCcchHHHHHHHHH
Confidence 888887 76 44 8999999995 8999999999999975
No 76
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-64 Score=557.68 Aligned_cols=479 Identities=21% Similarity=0.301 Sum_probs=396.6
Q ss_pred CCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005991 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (666)
Q Consensus 78 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA 157 (666)
+.++.++|.++++++|+++|+.+. + +.+||.||.+++.++|.+|.+.|+++|++|+++++|+++++++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~a~~~~---~------~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la 71 (497)
T PRK06145 1 MFNLSASIAFHARRTPDRAALVYR---D------QEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFA 71 (497)
T ss_pred CccHHHHHHHHHHHCCCceEEEEC---C------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 357899999999999999999764 2 3599999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehH
Q 005991 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYL 237 (666)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (666)
|+++|++++|+++.++.+++.++++.+++++++++.+...... . ....+.++.... ..+.
T Consensus 72 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~-----~--~~~~~~~~~~~~-------------~~~~ 131 (497)
T PRK06145 72 ASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVA-----L--ETPKIVIDAAAQ-------------ADSR 131 (497)
T ss_pred HHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhh-----c--ccceEEecCccc-------------chhH
Confidence 9999999999999999999999999999999999876543221 0 111222222100 0111
Q ss_pred HHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHH-HH
Q 005991 238 QLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-QI 316 (666)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~ 316 (666)
.+.. ............++++++++|||||||.||||++||+++...+......+++..+|+++..+|++|.+++.. .+
T Consensus 132 ~~~~-~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 210 (497)
T PRK06145 132 RLAQ-GGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGI 210 (497)
T ss_pred HHhc-cCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHH
Confidence 1111 111111222356789999999999999999999999999876665555678889999999999999998866 46
Q ss_pred HHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCCh
Q 005991 317 VSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSK 395 (666)
Q Consensus 317 ~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~ 395 (666)
.+++.|+++++.+ .++..+++.++++++|++.++|+++..++......
T Consensus 211 ~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~------------------------------- 259 (497)
T PRK06145 211 AVLWVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRD------------------------------- 259 (497)
T ss_pred HHHhccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCcc-------------------------------
Confidence 7889999998877 79999999999999999999999998886521000
Q ss_pred hhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCCC--CCCCCCccCCccCc
Q 005991 396 MWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKG--DNLSGHVGSPNPAC 472 (666)
Q Consensus 396 ~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~~~ 472 (666)
....+++|.+++||+++++++.+.+.+.+ +.++++.||+||++..++..... ....+++|+|++++
T Consensus 260 -----------~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~ 328 (497)
T PRK06145 260 -----------RFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHV 328 (497)
T ss_pred -----------ccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceeccCccccccCCCcccCCCCc
Confidence 00003799999999999999999998887 68899999999998765543322 23567899999999
Q ss_pred EEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCC
Q 005991 473 EIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQ 552 (666)
Q Consensus 473 ~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~ 552 (666)
+++++| +++..++.+. .|||+++|++++.||+++++.|++.| .++||+|||+|++++||+++++||+||+||+ +
T Consensus 329 ~~~i~~-~~~~~~~~~~---~Gel~v~g~~~~~Gy~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~-~ 402 (497)
T PRK06145 329 EIRIAD-GAGRWLPPNM---KGEICMRGPKVTKGYWKDPEKTAEAF-YGDWFRSGDVGYLDEEGFLYLTDRKKDMIIS-G 402 (497)
T ss_pred eEEEEC-CCCCCCCCCC---ceEEEEECcchhhhhcCChHHHHHHH-hCCCeeccceEEEcCCCcEEEeccccceEEe-C
Confidence 999999 5566665554 89999999999999999999999999 6899999999999999999999999999997 8
Q ss_pred eeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcchhHHH
Q 005991 553 GEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSHVIFIA 623 (666)
Q Consensus 553 G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~ 623 (666)
|++|+|.+||+.|.++|+|.+++|++.++. +.+++++++. .+++.++++++ ++ .+++|..+.+++
T Consensus 403 G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~-----~~~~p~~i~~v~ 476 (497)
T PRK06145 403 GENIASSEVERVIYELPEVAEAAVIGVHDDRWGERITAVVVLNPGATLTLEALDRHCRQR-LA-----SFKVPRQLKVRD 476 (497)
T ss_pred CeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEEEEEEECCCCCCCHHHHHHHHHHh-hh-----cCCCCCEEEEec
Confidence 999999999999999999999999997654 5788888864 46889999998 88 899999999995
Q ss_pred -HHHHHhhhhhhhhhccc
Q 005991 624 -LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 624 -~~~~~~gK~~r~~l~~~ 640 (666)
+|++.+||++|++|++.
T Consensus 477 ~iP~t~~GKi~r~~l~~~ 494 (497)
T PRK06145 477 ELPRNPSGKVLKRVLRDE 494 (497)
T ss_pred cCCCCCcccccHHHHHHH
Confidence 78888899999999864
No 77
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.9e-64 Score=561.86 Aligned_cols=488 Identities=20% Similarity=0.259 Sum_probs=403.2
Q ss_pred CCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005991 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (666)
Q Consensus 78 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA 157 (666)
..++.++|.++++ ||++|+++. + +.+||+||.++++++|.+|.+.|+++|++|+++++|+++|+++++|
T Consensus 24 ~~~~~~~~~~~a~--p~~~a~~~~---~------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la 92 (536)
T PRK10946 24 DLPLTDILTRHAA--SDAIAVICG---E------RQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFA 92 (536)
T ss_pred CccHHHHHHHhhC--CCCeEEEeC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHH
Confidence 3589999998887 999999753 2 3499999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEcccc-----HHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcE
Q 005991 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT-----LNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVK 232 (666)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~ 232 (666)
|+++|++++++.+....+++..+++++++++++++... ......+....+.++.++..+...
T Consensus 93 ~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------------- 159 (536)
T PRK10946 93 LLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDG------------- 159 (536)
T ss_pred HHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCC-------------
Confidence 99999998888888888899999999999999998643 112222333445566655543210
Q ss_pred EEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHH
Q 005991 233 LISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYER 312 (666)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~ 312 (666)
...+.++...... ..+.....++++++++|||||||.||||++||+++...+......+++.++|++++.+|++|.+++
T Consensus 160 ~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~ 238 (536)
T PRK10946 160 EHSLDDAINHPAE-DFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPM 238 (536)
T ss_pred CccHHHHhhCccc-ccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccc
Confidence 1233444433221 112234567999999999999999999999999999998887777888999999999999999887
Q ss_pred HH--HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHc
Q 005991 313 AN--QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVS 389 (666)
Q Consensus 313 ~~--~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~ 389 (666)
.. .+.++..|+++++.+ .++..+++.++++++|++.++|.++..+.........
T Consensus 239 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~----------------------- 295 (536)
T PRK10946 239 SSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGS----------------------- 295 (536)
T ss_pred hhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCc-----------------------
Confidence 64 577899999998876 7899999999999999999999999888764211000
Q ss_pred CCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCC-CCCCCCCccCC
Q 005991 390 GQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDK-GDNLSGHVGSP 468 (666)
Q Consensus 390 ~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p 468 (666)
. ...+++|.+++||+++++++.+.+.+.+|+++++.||+||++...+.... .....+++|+|
T Consensus 296 ---~--------------~~~~~l~~v~~gg~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p 358 (536)
T PRK10946 296 ---R--------------AQLASLKLLQVGGARLSETLARRIPAELGCQLQQVFGMAEGLVNYTRLDDSDERIFTTQGRP 358 (536)
T ss_pred ---c--------------ccccceeEEEECCCCCCHHHHHHHHHhcCCeEEEeecccccceeeecCCCccccccccCCcc
Confidence 0 00148999999999999999999998899999999999997644332211 12345789999
Q ss_pred c-cCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCe
Q 005991 469 N-PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNI 547 (666)
Q Consensus 469 ~-~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ 547 (666)
+ |+++++|+| ++++.++.++ .|||+++|+.++.|||++++.|++.|+.+|||+|||+|++|++|+++++||.+|+
T Consensus 359 ~~~~~~v~i~d-~~~~~~~~g~---~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~ 434 (536)
T PRK10946 359 MSPDDEVWVAD-ADGNPLPQGE---VGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQ 434 (536)
T ss_pred cCCCceEEEEC-CCCCCCCCCC---ccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECCCCcEEEeccccce
Confidence 8 799999999 5666666665 8999999999999999999999999988999999999999999999999999999
Q ss_pred EEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc----ChhHHHHHHHHcCCCcccccccccCcchh
Q 005991 548 FKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV----DPDVLKDWAASQGIKVIYCFSFRANSHVI 620 (666)
Q Consensus 548 ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~----~~~~l~~~~~~~~l~~~~~~~~~~p~~i~ 620 (666)
||+ +|++|+|.+||+.|.+||+|.+++|++.+++ +.++++|++ +.++++++++++.++ .|++|..+.
T Consensus 435 i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~l~~~~~~~~l~-----~~~~P~~~~ 508 (536)
T PRK10946 435 INR-GGEKIAAEEIENLLLRHPAVIHAALVSMEDELMGEKSCAFLVVKEPLKAVQLRRFLREQGIA-----EFKLPDRVE 508 (536)
T ss_pred eec-CCEEEcHHHHHHHHHhCCCcceEEEEcCCCcccCceEEEEEEeCCCCCHHHHHHHHHhCCcc-----ccccCcEEE
Confidence 996 8999999999999999999999999987754 578888885 457889999886587 999999999
Q ss_pred HHH-HHHHHhhhhhhhhhccc
Q 005991 621 FIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 621 ~v~-~~~~~~gK~~r~~l~~~ 640 (666)
+++ +|.+.+||++|++|++.
T Consensus 509 ~~~~iP~t~~GKv~r~~L~~~ 529 (536)
T PRK10946 509 CVDSLPLTAVGKVDKKQLRQW 529 (536)
T ss_pred EeccCCCCCCCcccHHHHHHH
Confidence 885 88888899999999875
No 78
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.4e-65 Score=673.62 Aligned_cols=520 Identities=19% Similarity=0.216 Sum_probs=430.5
Q ss_pred hHHHhhHHHHhhccccCCcCCCccccCCCCccccccCCCceEEcCCCCCCCcCccccCCCCCCcccccCCCCCCCCCHHH
Q 005991 4 SSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHD 83 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~ 83 (666)
..+.++|.++++++.++|+.++++++|.+...... + ..+.. .++.+...++++
T Consensus 1083 ~~l~~~~~~~l~~~~~~p~~~~~~l~l~~~~~~~~-------------------l-~~~~~-------~~~~~~~~~l~~ 1135 (4334)
T PRK05691 1083 ERLAEHFLALLEQVCEDPQRALGDVQLLDAAERAQ-------------------L-AQWGQ-------APCAPAQAWLPE 1135 (4334)
T ss_pred HHHHHHHHHHHHHHHhCcccchhhhcCCCHHHHHH-------------------H-HhccC-------CCCCCccCCHHH
Confidence 35788999999999999999999999876442100 0 00000 001223468999
Q ss_pred HHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCC
Q 005991 84 NFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSY 163 (666)
Q Consensus 84 ~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~ 163 (666)
+|+++++++||++|+.+. ++ .+||+||+++++++|++|.++|+++|++|+|+++|++++++++|||+++|+
T Consensus 1136 ~~~~~a~~~p~~~Al~~~---~~------~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~ 1206 (4334)
T PRK05691 1136 LLNEQARQTPERIALVWD---GG------SLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGG 1206 (4334)
T ss_pred HHHHHHHhCCCCeEEEEC---Cc------eEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCC
Confidence 999999999999999764 33 499999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcC
Q 005991 164 ISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQG 243 (666)
Q Consensus 164 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (666)
++|||++.++.+++.++++++++++++++......+.. ..... .+.++... ...
T Consensus 1207 ~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~----~~~~~-~~~~~~~~---------------------~~~ 1260 (4334)
T PRK05691 1207 AYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQ----AEGVS-AIALDSLH---------------------LDS 1260 (4334)
T ss_pred EEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhccc----ccCce-EEeecccc---------------------ccc
Confidence 99999999999999999999999999998765433211 11111 11111110 000
Q ss_pred CCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHHHhCc
Q 005991 244 CSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGV 323 (666)
Q Consensus 244 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~ 323 (666)
.....+.....+++++|++|||||||.||||+++|+++.+.+.+....+++.++|+++++.|++|+.++..++.+|..|+
T Consensus 1261 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~s~~~~~~~L~~G~ 1340 (4334)
T PRK05691 1261 WPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFDVSVWECFWPLITGC 1340 (4334)
T ss_pred cCCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHHHHHHHHhCCC
Confidence 00011222346899999999999999999999999999999988888889999999999999999999988999999999
Q ss_pred EEEEec----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhH
Q 005991 324 AVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDR 399 (666)
Q Consensus 324 ~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~ 399 (666)
++++.+ .++..+++.++++++|++.++|+++..+......
T Consensus 1341 ~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~------------------------------------ 1384 (4334)
T PRK05691 1341 RLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPLA------------------------------------ 1384 (4334)
T ss_pred EEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCccc------------------------------------
Confidence 999975 5889999999999999999999999887542100
Q ss_pred HhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccC--CCCCCCCCccCCccCcEEEE
Q 005991 400 LVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAID--KGDNLSGHVGSPNPACEIKL 476 (666)
Q Consensus 400 ~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~--~~~~~~~~vG~p~~~~~v~i 476 (666)
...+++|.+++||+++++++.+.|.+.+ +++++|.||+||++..++... ..+....++|+|++|++++|
T Consensus 1385 --------~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i 1456 (4334)
T PRK05691 1385 --------AACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRV 1456 (4334)
T ss_pred --------ccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeeecccccCCCCcccceeCCCEEEE
Confidence 0014899999999999999999998876 789999999999987665432 22345678999999999999
Q ss_pred EecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccC-------CCCeeecccEEEEecCCcEEEEccCCCeEE
Q 005991 477 VDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVID-------GDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (666)
Q Consensus 477 vd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~-------~~gw~~TGDlg~~~~dG~l~i~GR~~d~ik 549 (666)
+| ++++.++.|. .|||+|+|+++++||+++|+.|+++|. +.+||+|||+|++++||.++|+||+|++||
T Consensus 1457 ~d-~~~~~vp~G~---~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qik 1532 (4334)
T PRK05691 1457 LD-AELNLLPPGV---AGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVK 1532 (4334)
T ss_pred EC-CCCCCCCCCC---ceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEE
Confidence 99 5667777665 899999999999999999999999983 235999999999999999999999999999
Q ss_pred cCCeeeeccHHHHHHHhcCcCcceEEEEEeCC--CCeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcchhH
Q 005991 550 LAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF--NSCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSHVIF 621 (666)
Q Consensus 550 l~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~--~~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~i~~ 621 (666)
+ +|++|+|.|||++|.+||+|.+|+|++... .+.++|++++. .++++++++++ ++ .|++|..+++
T Consensus 1533 i-~G~rie~~eIE~~l~~~~~V~~a~v~~~~~~~~~~lva~~~~~~~~~~~~~~l~~~l~~~-Lp-----~y~vP~~~~~ 1605 (4334)
T PRK05691 1533 L-RGFRVEPEEIQARLLAQPGVAQAAVLVREGAAGAQLVGYYTGEAGQEAEAERLKAALAAE-LP-----EYMVPAQLIR 1605 (4334)
T ss_pred E-CCEEcCHHHHHHHHHhCCCcceEEEEEeeCCCCCEEEEEEEeCCCCCCCHHHHHHHHHHh-Cc-----cccCCcEEEE
Confidence 8 899999999999999999999999987543 36899999863 35899999998 98 9999999999
Q ss_pred HH-HHHHHhhhhhhhhhccc
Q 005991 622 IA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 622 v~-~~~~~~gK~~r~~l~~~ 640 (666)
++ +|.+.+||++|++|++.
T Consensus 1606 ~~~lP~t~~GKidr~~L~~~ 1625 (4334)
T PRK05691 1606 LDQMPLGPSGKLDRRALPEP 1625 (4334)
T ss_pred ccccCCCCCCCcChhhcCcc
Confidence 85 88888899999999765
No 79
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.6e-64 Score=559.22 Aligned_cols=493 Identities=25% Similarity=0.348 Sum_probs=411.4
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
...++.++|...++++||++|+.+. + +.+||+||.+++.++|..|.+.|+++|++|+++++|+++++++++
T Consensus 9 ~~~~l~~~l~~~a~~~~~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~ 79 (523)
T PRK08316 9 RRQTIGDILRRSARRYPDKTALVFG---D------RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWL 79 (523)
T ss_pred cCCCHHHHHHHHHHHCCCCeEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 3578999999999999999999764 3 359999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEeh
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (666)
||+++|++++|+++.++.+++.++++.+++++++++......+.+.....+. ..+....... ..........+
T Consensus 80 a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~ 152 (523)
T PRK08316 80 ACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPV-DTLILSLVLG------GREAPGGWLDF 152 (523)
T ss_pred HHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCc-cceeeeeccc------ccccccchhhH
Confidence 9999999999999999999999999999999999998877776655444331 1111111100 00111223455
Q ss_pred HHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHH-H
Q 005991 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-Q 315 (666)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~ 315 (666)
+++....... ........+++++++|||||||.||+|.+||++++..+......+++.++|++++.+|++|.+++.. +
T Consensus 153 ~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~ 231 (523)
T PRK08316 153 ADWAEAGSVA-EPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFL 231 (523)
T ss_pred HHHHhcCCCc-cCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHH
Confidence 5554433221 1233457889999999999999999999999999988777777778899999999999999999876 4
Q ss_pred HHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCC
Q 005991 316 IVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPS 394 (666)
Q Consensus 316 ~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~ 394 (666)
+.++..|+++++.+ .++..+++.++++++|++.++|.++..+.+....
T Consensus 232 ~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------------------------------- 280 (523)
T PRK08316 232 GPYLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDF------------------------------- 280 (523)
T ss_pred HHHHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCccc-------------------------------
Confidence 45788999999986 7999999999999999999999999877652100
Q ss_pred hhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCCCC--CCCCCccCCccC
Q 005991 395 KMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGD--NLSGHVGSPNPA 471 (666)
Q Consensus 395 ~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~~~ 471 (666)
+.....++|.+++||++++.++.+.+++.+ ++++++.||+||++.+++.....+ ...+++|+|+++
T Consensus 281 -----------~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~ 349 (523)
T PRK08316 281 -----------DTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLN 349 (523)
T ss_pred -----------ccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecccccCccccccCccccccccCCcccCCCC
Confidence 000114799999999999999999999877 789999999999988766544332 456789999999
Q ss_pred cEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcC
Q 005991 472 CEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLA 551 (666)
Q Consensus 472 ~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~ 551 (666)
++++|+| +++..++.+. .|||+++|+.++.||+++++.+++.| .+|||+|||+|++++||.++++||.||+||+
T Consensus 350 ~~~~i~~-~~~~~~~~g~---~Gei~v~~~~~~~~y~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~- 423 (523)
T PRK08316 350 VETRVVD-DDGNDVAPGE---VGEIVHRSPQLMLGYWDDPEKTAEAF-RGGWFHSGDLGVMDEEGYITVVDRKKDMIKT- 423 (523)
T ss_pred cEEEEEc-CCCCCCCCCC---cceEEEECCchhhhhcCCHHHHHHHh-hCCCeeccceEEEcCCceEEEecccccEEEe-
Confidence 9999999 5566666654 89999999999999999999999999 7899999999999999999999999999997
Q ss_pred CeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcchhHH
Q 005991 552 QGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSHVIFI 622 (666)
Q Consensus 552 ~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v 622 (666)
+|++|+|.+||+.+.++++|.+++|++.+++ +.++++++++ .+.+.++++++ ++ .+++|..+.++
T Consensus 424 ~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~-----~~~~p~~i~~v 497 (523)
T PRK08316 424 GGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEAVTAVVVPKAGATVTEDELIAHCRAR-LA-----GFKVPKRVIFV 497 (523)
T ss_pred CCeEECHHHHHHHHHhCCChheEeEecccCcccCCeEEEEEEECCCCCCCHHHHHHHHHHh-cc-----cCCCCcEEEEe
Confidence 8999999999999999999999999997654 5688888864 36788899888 87 89999999988
Q ss_pred H-HHHHHhhhhhhhhhccc
Q 005991 623 A-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 623 ~-~~~~~~gK~~r~~l~~~ 640 (666)
+ +|++.+||++|++|++.
T Consensus 498 ~~~p~t~~gKi~r~~l~~~ 516 (523)
T PRK08316 498 DELPRNPSGKILKRELRER 516 (523)
T ss_pred cCCCCCCccceeHHHHHHH
Confidence 5 77888899999999775
No 80
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.9e-64 Score=559.98 Aligned_cols=501 Identities=25% Similarity=0.372 Sum_probs=401.9
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
...++.++|...++++|+++|+++. + +.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++
T Consensus 21 ~~~~i~~~l~~~a~~~p~~~a~~~~---~------~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~l 91 (557)
T PRK07059 21 QYPSLADLLEESFRQYADRPAFICM---G------KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIA 91 (557)
T ss_pred CCCCHHHHHHHHHHHcCCCceEEEc---C------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHH
Confidence 3568999999999999999999764 3 359999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCC-CCCCC----------
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDE-HLPSL---------- 225 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~-~~~~~---------- 225 (666)
||+++|++++|+++.++.+++.+++++++++++|++......+.+..... ..+.++....... .....
T Consensus 92 a~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (557)
T PRK07059 92 AVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKT-AVKHVVVASMGDLLGFKGHIVNFVVRRVK 170 (557)
T ss_pred HHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhccc-CCceeEEeccccccccccccccccccccc
Confidence 99999999999999999999999999999999999877665555443322 2333333221100 00000
Q ss_pred ---CCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccccc----cc---C
Q 005991 226 ---PSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMV----QF---Y 295 (666)
Q Consensus 226 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~----~~---~ 295 (666)
..........++++...+...........++++++|+|||||||.||||+++|++++..+......+ .. .
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~ 250 (557)
T PRK07059 171 KMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRP 250 (557)
T ss_pred ccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCC
Confidence 0000011244555554443322233446789999999999999999999999999987654332211 11 1
Q ss_pred CCcEEEEcCChHHHHHHHH-HHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHH
Q 005991 296 PSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLR 372 (666)
Q Consensus 296 ~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~ 372 (666)
..+.+++.+|++|.+++.. .+.++..|++.++.+ .++..+++.++++++|.+.++|+++..+......
T Consensus 251 ~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~--------- 321 (557)
T PRK07059 251 DQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDF--------- 321 (557)
T ss_pred CCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCc---------
Confidence 2457888999999998765 556788888877765 5889999999999999999999999887652100
Q ss_pred HHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhh
Q 005991 373 EKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCII 452 (666)
Q Consensus 373 ~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~ 452 (666)
.... .+++|.++.||+++++.+.+.|.+.+++++++.||+||++.++
T Consensus 322 -------------------------~~~~--------~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 368 (557)
T PRK07059 322 -------------------------DKLD--------FSKLIVANGGGMAVQRPVAERWLEMTGCPITEGYGLSETSPVA 368 (557)
T ss_pred -------------------------CcCC--------chhheEEEeccccCCHHHHHHHHHHhCCCeeeccccccccchh
Confidence 0000 0378999999999999999999988999999999999998876
Q ss_pred hccCCCC-CCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEE
Q 005991 453 SAIDKGD-NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGL 531 (666)
Q Consensus 453 ~~~~~~~-~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~ 531 (666)
+...... ...+++|.|+++++++|+| ++++.++.+. .|||+++|+.++.||+++++.|++.|..+|||+|||+|+
T Consensus 369 ~~~~~~~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~ 444 (557)
T PRK07059 369 TCNPVDATEFSGTIGLPLPSTEVSIRD-DDGNDLPLGE---PGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGV 444 (557)
T ss_pred hcCCCCCCCcCCcccCccCCcEEEEEC-CCCCCCCCCC---ceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEE
Confidence 6544322 3467899999999999999 5666666665 899999999999999999999999998899999999999
Q ss_pred EecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC-----hhHHHHHHHHc
Q 005991 532 WLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD-----PDVLKDWAASQ 603 (666)
Q Consensus 532 ~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~-----~~~l~~~~~~~ 603 (666)
+++||.++++||++|+||+ +|++|+|.+||+++.+||+|.+++|++.++. +.++++|+.. .+++.++++++
T Consensus 445 ~~~~g~~~~~GR~~~~i~~-~G~~i~p~~iE~~l~~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~~~~~~~~l~~~~~~~ 523 (557)
T PRK07059 445 MDERGYTKIVDRKKDMILV-SGFNVYPNEIEEVVASHPGVLEVAAVGVPDEHSGEAVKLFVVKKDPALTEEDVKAFCKER 523 (557)
T ss_pred EcCCCcEEEecccccceEE-CCEEEcHHHHHHHHHhCCceeEEEEEecccCCCCeeEEEEEEeCCCCCCHHHHHHHHHHh
Confidence 9999999999999999997 8999999999999999999999999986643 5688888753 47888999988
Q ss_pred CCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 604 GIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 604 ~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
++ .+++|..+.+++ +|++.+||++|++|+..
T Consensus 524 -l~-----~~~~P~~i~~v~~~P~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 524 -LT-----NYKRPKFVEFRTELPKTNVGKILRRELRDG 555 (557)
T ss_pred -cc-----cccCCcEEEEeccCCCCcccceeHHHHHhh
Confidence 87 899999999995 78888899999998753
No 81
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.8e-64 Score=559.32 Aligned_cols=497 Identities=19% Similarity=0.256 Sum_probs=400.4
Q ss_pred CCCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHH
Q 005991 75 HPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIV 154 (666)
Q Consensus 75 ~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~ 154 (666)
.+...++.++|.+.++++|+++|+... + +.+||+||.+++.++|++|.+.|+++||+|+++++|+++|+++
T Consensus 6 ~~~~~~l~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~ 76 (540)
T PRK06164 6 APRADTLASLLDAHARARPDAVALIDE---D------RPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVL 76 (540)
T ss_pred ccCCCCHHHHHHHHHHhCCCCeEEecC---C------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHH
Confidence 345568999999999999999999632 2 3599999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccH-----HHHHHhhh-cCCCceEEEEeCCCCCCCCCCCCC
Q 005991 155 DHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTL-----NTLLSFIS-EIPSVHLIVVVGGKDEHLPSLPST 228 (666)
Q Consensus 155 ~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~-~~~~l~~ii~~~~~~~~~~~~~~~ 228 (666)
++||+++|++++|+++..+.+++.+++++++++++|++.+.. +.+..... ..+.++.++.++...........
T Consensus 77 ~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 155 (540)
T PRK06164 77 FLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPAPAP- 155 (540)
T ss_pred HHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCCCCc-
Confidence 999999999999999999999999999999999999986642 22222111 12345555555421111110000
Q ss_pred CCcEEEehHHHHhcCCCCCC---CCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCC
Q 005991 229 SGVKLISYLQLQSQGCSSPQ---PFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLP 305 (666)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p 305 (666)
..+.++......... ......++++++++|||||||.||||++||+++...+......+++.+++++++++|
T Consensus 156 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p 230 (540)
T PRK06164 156 -----GARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALP 230 (540)
T ss_pred -----ccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCC
Confidence 011111111000000 012234689999999999999999999999999998888777788899999999999
Q ss_pred hHHHHHHHHHHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 005991 306 LAHIYERANQIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKK 384 (666)
Q Consensus 306 l~h~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~ 384 (666)
++|.+++...+.++..|+++++.+ +++..+++.|+++++|+++++|+++..+.+... ..
T Consensus 231 ~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~~----~~---------------- 290 (540)
T PRK06164 231 FCGVFGFSTLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTAG----ER---------------- 290 (540)
T ss_pred chhHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhhc----cc----------------
Confidence 999999988889999999999887 799999999999999999999999998876300 00
Q ss_pred HHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecC-CCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCC---C
Q 005991 385 QAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGA-SPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD---N 460 (666)
Q Consensus 385 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG-~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~---~ 460 (666)
...++++.+.++| .+.+.++.+++... |+++++.||+||++.+++...... .
T Consensus 291 -----------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~ 346 (540)
T PRK06164 291 -----------------------ADFPSARLFGFASFAPALGELAALARAR-GVPLTGLYGSSEVQALVALQPATDPVSV 346 (540)
T ss_pred -----------------------CCCcceeeeeeccCCcchHHHHHHHhhc-CCceecceeeccccceeeccCCCCCCcc
Confidence 0013678776665 66667777777664 899999999999987665543322 2
Q ss_pred CCCCccCCc-cCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEE
Q 005991 461 LSGHVGSPN-PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLK 539 (666)
Q Consensus 461 ~~~~vG~p~-~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~ 539 (666)
...+.|.|. ++++++|+|++++..++.++ .|||||+|++++.|||++++.|++.|+.+|||+|||+|+++++|.++
T Consensus 347 ~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~ 423 (540)
T PRK06164 347 RIEGGGRPASPEARVRARDPQDGALLPDGE---SGEIEIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRGDGQFV 423 (540)
T ss_pred eeccCccccCCCeEEEEecCCCCcCCCCCC---eeEEEEecccccccccCCchhhhhcccCCCceecCCeEEEcCCceEE
Confidence 334578875 89999999977777776665 89999999999999999999999999889999999999999999999
Q ss_pred EEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCC--CCeEEEEEEcC------hhHHHHHHHHcCCCccccc
Q 005991 540 IIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF--NSCLVAIVAVD------PDVLKDWAASQGIKVIYCF 611 (666)
Q Consensus 540 i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~--~~~~va~vv~~------~~~l~~~~~~~~l~~~~~~ 611 (666)
+.||.||+||+ +|++|+|.+||+++.+||+|.+++|++.+. .+.++++++++ .+++.++++++ ++
T Consensus 424 ~~GR~~~~i~~-~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~~~~~-l~----- 496 (540)
T PRK06164 424 YQTRMGDSLRL-GGFLVNPAEIEHALEALPGVAAAQVVGATRDGKTVPVAFVIPTDGASPDEAGLMAACREA-LA----- 496 (540)
T ss_pred EEeecCCeEEE-CCEEcCHHHHHHHHHhCCCceeEEEEecCCCCceeEEEEEEeCCCCCCCHHHHHHHHHhh-cc-----
Confidence 99999999997 899999999999999999999999998653 35788888863 46889999998 88
Q ss_pred ccccCcchhHHH-HHHHHhh---hhhhhhhccc
Q 005991 612 SFRANSHVIFIA-LIHNLCQ---LYSSKELFRS 640 (666)
Q Consensus 612 ~~~~p~~i~~v~-~~~~~~g---K~~r~~l~~~ 640 (666)
.+++|..+.+++ +|.+.+| |++|++|++.
T Consensus 497 ~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~ 529 (540)
T PRK06164 497 GFKVPARVQVVEAFPVTESANGAKIQKHRLREM 529 (540)
T ss_pred cCcCCcEEEEecCCCCCCCCccccccHHHHHHH
Confidence 899999999996 7777778 9999999775
No 82
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.5e-64 Score=612.83 Aligned_cols=497 Identities=24% Similarity=0.297 Sum_probs=405.2
Q ss_pred CCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH
Q 005991 76 PEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD 155 (666)
Q Consensus 76 ~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~ 155 (666)
+...++.++|.+.++++||++|+.+. ++ +.+||+||.++++++|++|.+ ++++||+|+++++|++++++++
T Consensus 612 ~~~~~l~~~~~~~a~~~p~~~a~~~~---~~-----~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~ 682 (1146)
T PRK08633 612 EALPPLAEAWIDTAKRNWSRLAVADS---TG-----GELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALAN 682 (1146)
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEEcC---CC-----CcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHH
Confidence 45688999999999999999999642 22 359999999999999999987 5899999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhh--hcCCCceEEEEeCCCCCCCCCCCCCCCcEE
Q 005991 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI--SEIPSVHLIVVVGGKDEHLPSLPSTSGVKL 233 (666)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~--~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~ 233 (666)
+||+++|++++|+++.++.+++.+++++++++++++++...+.+.+.. ...+....++..++...... ..
T Consensus 683 la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 754 (1146)
T PRK08633 683 LALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKIS--------KV 754 (1146)
T ss_pred HHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccc--------hh
Confidence 999999999999999999999999999999999999987665543211 01223334444433211000 00
Q ss_pred EehHHHHhcCCCC-----CCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHH
Q 005991 234 ISYLQLQSQGCSS-----PQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAH 308 (666)
Q Consensus 234 ~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h 308 (666)
..+.+........ ........++|+++++|||||||.||||++||+++.+.+......+++.++|++++.+|++|
T Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h 834 (1146)
T PRK08633 755 DKLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFH 834 (1146)
T ss_pred HHHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHH
Confidence 1122211110000 00013456899999999999999999999999999998887777788899999999999999
Q ss_pred HHHHHH-HHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHH
Q 005991 309 IYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQ 385 (666)
Q Consensus 309 ~~~~~~-~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~ 385 (666)
.+++.. .+.++..|+++++.+ .++..+++.++++++|++.++|++++.+.+....
T Consensus 835 ~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~---------------------- 892 (1146)
T PRK08633 835 SFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKL---------------------- 892 (1146)
T ss_pred HHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhcccc----------------------
Confidence 999887 678899999998876 6899999999999999999999999877652100
Q ss_pred HHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC-------
Q 005991 386 AIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG------- 458 (666)
Q Consensus 386 ~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~------- 458 (666)
.+...+++|.+++||+++++++.+.+++.+|+++++.||+||++++++...+.
T Consensus 893 --------------------~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~ 952 (1146)
T PRK08633 893 --------------------HPLMFASLRLVVAGAEKLKPEVADAFEEKFGIRILEGYGATETSPVASVNLPDVLAADFK 952 (1146)
T ss_pred --------------------CcccCCCeeeEEEcCCcCCHHHHHHHHHHhCCCeecccccccCcceEEEecCcccccccc
Confidence 00001489999999999999999999998999999999999998766544321
Q ss_pred ---CCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCC---CCeeecccEEEE
Q 005991 459 ---DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDG---DGWLHTGDIGLW 532 (666)
Q Consensus 459 ---~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~---~gw~~TGDlg~~ 532 (666)
....+++|+|+||++++|+|+++++.++.++ .|||+++|++++.||+++|+.|++.+.+ +|||+|||+|++
T Consensus 953 ~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~ 1029 (1146)
T PRK08633 953 RQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGE---DGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHL 1029 (1146)
T ss_pred cccCCCCCCccccCCCCEEEEEcCCCCccCCCCC---ceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEE
Confidence 1346789999999999999977777777665 8999999999999999999999998832 399999999999
Q ss_pred ecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCc--CcceEEEEEeCCC---CeEEEEEEc---ChhHHHHHHHHcC
Q 005991 533 LPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCK--FVLQCFIYGDSFN---SCLVAIVAV---DPDVLKDWAASQG 604 (666)
Q Consensus 533 ~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p--~V~~~~V~g~~~~---~~~va~vv~---~~~~l~~~~~~~~ 604 (666)
|+||+++++||.||+||+ +|++|+|.|||+++.+|| .+.+|+|++.+++ +.+++++++ +.++++++++++.
T Consensus 1030 ~~~g~l~~~gR~~d~i~~-~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~l~~~~~~~~ 1108 (1146)
T PRK08633 1030 DEDGFLTITDRYSRFAKI-GGEMVPLGAVEEELAKALGGEEVVFAVTAVPDEKKGEKLVVLHTCGAEDVEELKRAIKESG 1108 (1146)
T ss_pred cCCceEEEEecccchhhh-CcEEECHHHHHHHHHhccCCCCceEEEEeccCCCCCcEEEEEEecCccCHHHHHHHHHhcC
Confidence 999999999999999997 899999999999999999 5678999987764 578888875 4567888887655
Q ss_pred CCcccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 605 IKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 605 l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
++ .|++|..+++++ +|++.+||++|++|++.
T Consensus 1109 l~-----~~~~P~~i~~~~~iP~t~~GKi~r~~L~~~ 1140 (1146)
T PRK08633 1109 LP-----NLWKPSRYFKVEALPLLGSGKLDLKGLKEL 1140 (1146)
T ss_pred CC-----cccCCcEEEEecCcCCCCCCCCcHHHHHHH
Confidence 87 999999999996 77888899999999875
No 83
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=6.5e-64 Score=561.08 Aligned_cols=502 Identities=21% Similarity=0.264 Sum_probs=395.3
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
.|++..|...++.+|+++|+.+. . ..+||+||.++++++|.+|.+.|+++||+|+++++|+++|+++++||
T Consensus 20 ~~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~ 90 (567)
T PLN02479 20 LTPLWFLERAAVVHPTRKSVVHG---S------VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGV 90 (567)
T ss_pred cCHHHHHHHHHhhCCCceEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHH
Confidence 46899999999999999999753 1 35899999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCC-------CceEEEEeCCCCCCCCCCCCCCCc
Q 005991 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIP-------SVHLIVVVGGKDEHLPSLPSTSGV 231 (666)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-------~l~~ii~~~~~~~~~~~~~~~~~~ 231 (666)
+++|++++|+++.++.+++.+++++++++++|+++...+...+....+. ....++.++...............
T Consensus 91 ~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (567)
T PLN02479 91 PMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGK 170 (567)
T ss_pred HhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCcccccccccc
Confidence 9999999999999999999999999999999999877655544332211 112344443211110000000111
Q ss_pred EEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHH
Q 005991 232 KLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYE 311 (666)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~ 311 (666)
....|.+++...............+++++++|||||||.||||++||+++..........+++..++++++.+|++|.++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~ 250 (567)
T PLN02479 171 GAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTLPMFHCNG 250 (567)
T ss_pred CcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEecchhhhhh
Confidence 23456666654322111112234457788999999999999999999998766655555567888999999999999999
Q ss_pred HHHHH-HHHHhCcEEEEecCCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcC
Q 005991 312 RANQI-VSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSG 390 (666)
Q Consensus 312 ~~~~~-~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~ 390 (666)
+...+ ..+..|.++++..+++..+++.++++++|++.++|+++..|.+.....
T Consensus 251 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~-------------------------- 304 (567)
T PLN02479 251 WCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSE-------------------------- 304 (567)
T ss_pred HHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhc--------------------------
Confidence 87654 356677777666689999999999999999999999999886531100
Q ss_pred CCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCC---------CC--
Q 005991 391 QTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDK---------GD-- 459 (666)
Q Consensus 391 ~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~---------~~-- 459 (666)
.. ...++++.++++|+++++++.++|++. ++++++.||+||+++.++.... ..
T Consensus 305 ----~~-----------~~~~~l~~~~~~G~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~ 368 (567)
T PLN02479 305 ----TI-----------LPLPRVVHVMTAGAAPPPSVLFAMSEK-GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQA 368 (567)
T ss_pred ----cc-----------ccccceeEEEEcCCCCCHHHHHHHHhc-CCceecccccccccccccceeccccccccCccccc
Confidence 00 001478999999999999999998874 8999999999998654332210 00
Q ss_pred CCCCCccCCccCcE-EEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcE
Q 005991 460 NLSGHVGSPNPACE-IKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRL 538 (666)
Q Consensus 460 ~~~~~vG~p~~~~~-v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l 538 (666)
....++|.+.++++ ++|+|.+++..++.+. ++.|||+++|++++.|||++|+.|++.| .+|||+|||+|++|++|++
T Consensus 369 ~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g-~~~GEl~v~g~~~~~GY~~~~~~t~~~~-~~g~~~TGDl~~~~~~g~l 446 (567)
T PLN02479 369 RLNARQGVRYIGLEGLDVVDTKTMKPVPADG-KTMGEIVMRGNMVMKGYLKNPKANEEAF-ANGWFHSGDLGVKHPDGYI 446 (567)
T ss_pred ccccccCCCcCCcCceeEEcCCCCcccCCCC-CCceEEEEeccchhhhhhcCcccccchh-cCCceecceeEEEcCCccE
Confidence 11245788888876 8899866666655431 1379999999999999999999999999 6899999999999999999
Q ss_pred EEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh-----------hHHHHHHHHcC
Q 005991 539 KIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP-----------DVLKDWAASQG 604 (666)
Q Consensus 539 ~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~-----------~~l~~~~~~~~ 604 (666)
+|+||.||+||+ +|++|+|.+||++|.+||.|.+|+|++.+++ +.+++++++.+ +++.++++++
T Consensus 447 ~~~GR~~d~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~- 524 (567)
T PLN02479 447 EIKDRSKDIIIS-GGENISSLEVENVVYTHPAVLEASVVARPDERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRER- 524 (567)
T ss_pred EEeccccceEEe-CCEEEcHHHHHHHHHhCcccceeeEEeccchhcCceeEEEEEecCcccccchhhhHHHHHHHHHhh-
Confidence 999999999996 8999999999999999999999999997653 57889888642 4678888888
Q ss_pred CCcccccccccCcchhHHHHHHHHhhhhhhhhhccc
Q 005991 605 IKVIYCFSFRANSHVIFIALIHNLCQLYSSKELFRS 640 (666)
Q Consensus 605 l~~~~~~~~~~p~~i~~v~~~~~~~gK~~r~~l~~~ 640 (666)
++ .|+.|+.+.+.++|.+.+||++|++|++.
T Consensus 525 l~-----~~~~P~~~~~~~iP~t~~gKv~r~~L~~~ 555 (567)
T PLN02479 525 LP-----AYWVPKSVVFGPLPKTATGKIQKHVLRAK 555 (567)
T ss_pred cc-----cccCCceEEeccCCCCCccCeeHHHHHHH
Confidence 88 99999998887888888999999999765
No 84
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-63 Score=555.52 Aligned_cols=498 Identities=20% Similarity=0.268 Sum_probs=404.7
Q ss_pred CCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005991 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (666)
Q Consensus 78 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA 157 (666)
..|+.++|+.+++++||+++++.. .+ ++.+.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++|
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~~--~~---~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la 83 (542)
T PRK06018 9 PLLCHRIIDHAARIHGNREVVTRS--VE---GPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYG 83 (542)
T ss_pred CCCHHHHHHHHHHhCCCceEEEee--cc---CCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHH
Confidence 358999999999999999999743 12 2356799999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehH
Q 005991 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYL 237 (666)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (666)
|+++|++++|+++.++.+++.++++.+++++++++....+.+.+.....+.++.++...+... ... ........|.
T Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~ 159 (542)
T PRK06018 84 IMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAH-MPQ---TTLKNAVAYE 159 (542)
T ss_pred HHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEeccccc-ccc---cCccccccHH
Confidence 999999999999999999999999999999999998888777776666666666665543211 000 0111234566
Q ss_pred HHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHH-HH-HhhcccccccCCCcEEEEcCChHHHHHHHHH
Q 005991 238 QLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLI-SN-VAGFSLMVQFYPSDIYMSYLPLAHIYERANQ 315 (666)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~-~~-~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~ 315 (666)
++...... ........++++++|+|||||||.||||++||++.+ +. .......+++..+|+++..+|++|.+++...
T Consensus 160 ~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~~~ 238 (542)
T PRK06018 160 EWIAEADG-DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSWGIA 238 (542)
T ss_pred HHhccCCc-ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhHHH
Confidence 66543321 111233467889999999999999999999999743 22 2233445678899999999999999998877
Q ss_pred HHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCC
Q 005991 316 IVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTP 393 (666)
Q Consensus 316 ~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~ 393 (666)
+.++..|+++++.. .++..+++.++++++|++.++|+++..+.........
T Consensus 239 ~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~--------------------------- 291 (542)
T PRK06018 239 FSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGL--------------------------- 291 (542)
T ss_pred HhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCC---------------------------
Confidence 88899999998864 6889999999999999999999999888653211000
Q ss_pred ChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCC-----------CCC
Q 005991 394 SKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD-----------NLS 462 (666)
Q Consensus 394 ~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~-----------~~~ 462 (666)
..+++|.+++||+++++++.++|++ +++++++.||+||++.+.+...... ...
T Consensus 292 ---------------~~~~lr~~~~~G~~l~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (542)
T PRK06018 292 ---------------KLPHLKMVVCGGSAMPRSMIKAFED-MGVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVL 355 (542)
T ss_pred ---------------CcccceEEEEcCCCCCHHHHHHHHH-hCCCeEeeecccccCcccccccCccccccCCchhhhhcc
Confidence 0037999999999999999999999 8999999999999987655432111 123
Q ss_pred CCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEc
Q 005991 463 GHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIID 542 (666)
Q Consensus 463 ~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~G 542 (666)
.++|+|.++++++|+| +++..++.+. +..|||+++|++++.|||++ +.+.++.+|||+|||+|+++++|++++.|
T Consensus 356 ~~~G~~~~g~~i~v~d-~~~~~~~~~~-~~~Gel~i~g~~~~~gy~~~---~~~~~~~~~~~~TGDl~~~~~~g~~~~~G 430 (542)
T PRK06018 356 QKQGYPPFGVEMKITD-DAGKELPWDG-KTFGRLKVRGPAVAAAYYRV---DGEILDDDGFFDTGDVATIDAYGYMRITD 430 (542)
T ss_pred ccCCCCCCCcEEEEEC-CCCCCCCCCC-CceeEEEEecCCcchhhhcC---cccEecCCcEEEcCCEEEEcCCccEEEEe
Confidence 5789999999999999 4555554321 13799999999999999983 34556679999999999999999999999
Q ss_pred cCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCccccccc
Q 005991 543 RKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSF 613 (666)
Q Consensus 543 R~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~ 613 (666)
|.+|+||+ +|++|+|.+||+++.+||+|.+|+|++.++. +.++++|++. .+++.++++++ ++ .+
T Consensus 431 R~~d~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~-----~~ 503 (542)
T PRK06018 431 RSKDVIKS-GGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDERPLLIVQLKPGETATREEILKYMDGK-IA-----KW 503 (542)
T ss_pred cCCCeEEE-CCEEECHHHHHHHHHhCCcceeEEEEeccCCCcCceeEEEEEeCCCCCCCHHHHHHHHHhh-Cc-----cc
Confidence 99999996 8999999999999999999999999997653 5677777753 46889999998 88 89
Q ss_pred ccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 614 RANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 614 ~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
++|..+.+++ +|++.+||++|++|++.
T Consensus 504 ~~P~~i~~v~~iP~t~~GKi~r~~L~~~ 531 (542)
T PRK06018 504 WMPDDVAFVDAIPHTATGKILKTALREQ 531 (542)
T ss_pred cCCcEEEEeccCCCCCcchhhHHHHHHH
Confidence 9999999995 88888899999999875
No 85
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-63 Score=553.84 Aligned_cols=489 Identities=20% Similarity=0.268 Sum_probs=390.8
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCCHhHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFH-GLQKGVRIGLYLINRPEWLIVD 155 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~-gv~~gd~V~i~~~n~~e~~~~~ 155 (666)
...++.++|.+.+. +|++|+.+. + +++||.||.++++++|++|.++ |+++|++|+++++|+++|++++
T Consensus 3 ~~~~~~~~l~~~a~--~~~~a~~~~---~------~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~ 71 (529)
T PRK07867 3 SAPTVAELLLPLAE--DDDRGLYFE---D------SFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLL 71 (529)
T ss_pred ccccHHHHHHHhcc--cCCceEEEC---C------cEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHH
Confidence 45678999988775 788998653 2 4699999999999999999997 8999999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEe
Q 005991 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLIS 235 (666)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (666)
+||+++|++++|+++.++.+++.+++++++++++|+++.....+.... +.+.. +..+. ..
T Consensus 72 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~---~~~~~-~~~~~----------------~~ 131 (529)
T PRK07867 72 GAAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD---PGVRV-INVDS----------------PA 131 (529)
T ss_pred HHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc---cCceE-EEecc----------------cc
Confidence 999999999999999999999999999999999999987665544332 22222 22211 12
Q ss_pred hHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHH-
Q 005991 236 YLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN- 314 (666)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~- 314 (666)
|.+++..............++++++|+|||||||.||||++||+++..........+++..+|++++.+|++|.+++..
T Consensus 132 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~ 211 (529)
T PRK07867 132 WADELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAG 211 (529)
T ss_pred HHHHhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHH
Confidence 3333322211112223457799999999999999999999999999888887777788899999999999999999877
Q ss_pred HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCC
Q 005991 315 QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTP 393 (666)
Q Consensus 315 ~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~ 393 (666)
.+.++..|+++++.+ .++..+++.++++++|++.++|+.+..++..... .
T Consensus 212 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~-----------------------------~ 262 (529)
T PRK07867 212 WAVALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPER-----------------------------P 262 (529)
T ss_pred HHHHHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCc-----------------------------c
Confidence 446788999998876 7899999999999999999999998876542100 0
Q ss_pred ChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCccCcE
Q 005991 394 SKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACE 473 (666)
Q Consensus 394 ~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~ 473 (666)
. ....++|. ++||+++++.+ ..+.+.+|+++++.||+||++..++... ....+++|.|+++
T Consensus 263 -~------------~~~~~lr~-~~gg~~~~~~~-~~~~~~~g~~l~~~YG~TE~~~~~~~~~--~~~~~~~g~~~~~-- 323 (529)
T PRK07867 263 -D------------DADNPLRI-VYGNEGAPGDI-ARFARRFGCVVVDGFGSTEGGVAITRTP--DTPPGALGPLPPG-- 323 (529)
T ss_pred -c------------ccccceEE-EecCCCChHHH-HHHHHHhCCcEEEeecccccccccccCC--CCCCCCcCCCCCC--
Confidence 0 00136774 56888888775 5566678999999999999986544322 2345789999999
Q ss_pred EEEEecCCCCCCCCCC---------CCCccEEEE-eCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEcc
Q 005991 474 IKLVDVPEMNYTSEDQ---------PHPRGEICV-RGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDR 543 (666)
Q Consensus 474 v~ivd~~~~~~~~~~~---------~~~~GEl~v-~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR 543 (666)
++++|.+++..++.+. .+..|||++ +|++++.||+++++.|.+.| .+|||+|||+|+++++|+++|+||
T Consensus 324 ~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR 402 (529)
T PRK07867 324 VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERM-RGGVYWSGDLAYRDADGYAYFAGR 402 (529)
T ss_pred EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhh-cCCeEeeccEEEEeCCCcEEEecc
Confidence 7778855555554432 011799999 99999999999999999999 689999999999999999999999
Q ss_pred CCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc------ChhHHHHHHHHc-CCCccccccc
Q 005991 544 KKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV------DPDVLKDWAASQ-GIKVIYCFSF 613 (666)
Q Consensus 544 ~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~------~~~~l~~~~~~~-~l~~~~~~~~ 613 (666)
.||+||+ +|++|+|.|||++|.+||+|.+|+|+|.+++ +.++++|++ ++++++++++++ .++ .+
T Consensus 403 ~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~~~~~~~l~-----~~ 476 (529)
T PRK07867 403 LGDWMRV-DGENLGTAPIERILLRYPDATEVAVYAVPDPVVGDQVMAALVLAPGAKFDPDAFAEFLAAQPDLG-----PK 476 (529)
T ss_pred ccCeEEE-CCEEeCHHHHHHHHHhCCCeeEEEEEeccCCCCCeeEEEEEEECCCCCCCHHHHHHHHHhhccCC-----cc
Confidence 9999997 8999999999999999999999999998754 578888775 356888888763 366 89
Q ss_pred ccCcchhHHH-HHHHHhhhhhhhhhccchhhhhcCCCcccee
Q 005991 614 RANSHVIFIA-LIHNLCQLYSSKELFRSRCCYRTGRDSSVFC 654 (666)
Q Consensus 614 ~~p~~i~~v~-~~~~~~gK~~r~~l~~~~~~~~~~~~~~~~~ 654 (666)
++|..+.+++ +|++.+||++|++|++.. +.+.+...|.
T Consensus 477 ~~P~~i~~~~~iP~t~~GKv~r~~L~~~~---~~~~~~~~~~ 515 (529)
T PRK07867 477 QWPSYVRVCAELPRTATFKVLKRQLSAEG---VDCADPVWWI 515 (529)
T ss_pred cCCeEEEEeeccCCCCCcceeHHHHHHhc---CCCCCCeeeh
Confidence 9999999985 788888999999998752 3344444443
No 86
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=1.5e-63 Score=551.83 Aligned_cols=487 Identities=22% Similarity=0.306 Sum_probs=407.5
Q ss_pred CCCHHHHHHHH-HHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 78 IGTLHDNFIYA-VENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 78 ~~tl~~~~~~~-a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
.+...+++.+. ++.+||++|+... + ..+||.||.++++++|++|.+.|+++|++|+++++|+++|+++++
T Consensus 3 ~~~~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~ 73 (508)
T TIGR02262 3 YNAAEDLLDRNVVEGRGGKTAFIDD---I------SSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFL 73 (508)
T ss_pred chHHHHHHHHHHhcccCCceEEEeC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 35567888876 6779999999643 2 359999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEeh
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (666)
||+++|++++|+++.++.+++.++++.+++++++++....+.+.+....++.++.++..+.... ....+
T Consensus 74 a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 142 (508)
T TIGR02262 74 GAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEA-----------GEVQL 142 (508)
T ss_pred HHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCc-----------ccccH
Confidence 9999999999999999999999999999999999998887777776667777777776644210 11234
Q ss_pred HHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhh-cccccccCCCcEEEEcCChHHHHHHHH-
Q 005991 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAG-FSLMVQFYPSDIYMSYLPLAHIYERAN- 314 (666)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~-~~~~~~~~~~d~~l~~~pl~h~~~~~~- 314 (666)
.++...... ........++++++++|||||||.||||++||+++...+.. ....+++.++|++++.+|++|.+++..
T Consensus 143 ~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~ 221 (508)
T TIGR02262 143 AELLATESE-QFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNA 221 (508)
T ss_pred HHHhhcCCC-ccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHH
Confidence 444332221 11223345789999999999999999999999999887765 344567889999999999999999866
Q ss_pred HHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCC
Q 005991 315 QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT 392 (666)
Q Consensus 315 ~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~ 392 (666)
++.++..|+++++.+ .++..+++.|++++||++.++|.++..+.....
T Consensus 222 ~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~------------------------------ 271 (508)
T TIGR02262 222 LTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPN------------------------------ 271 (508)
T ss_pred HHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCcc------------------------------
Confidence 556789999998876 589999999999999999999998876653100
Q ss_pred CChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCccCc
Q 005991 393 PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPAC 472 (666)
Q Consensus 393 ~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~ 472 (666)
.+.....++|.+++||+++++++.+.|.+.+|+++++.||+||++...+.....+...+++|.|++++
T Consensus 272 ------------~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~g~ 339 (508)
T TIGR02262 272 ------------LPAEDQVRLRLCTSAGEALPAEVGQRWQARFGVDIVDGIGSTEMLHIFLSNLPGDVRYGTSGKPVPGY 339 (508)
T ss_pred ------------ccccccccceeEEEcCCCCCHHHHHHHHHHhCCchhhCccccccCceeecCCccCCCCCCcCCCCCCc
Confidence 00001248999999999999999999999899999999999999876554444444567899999999
Q ss_pred EEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCC
Q 005991 473 EIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQ 552 (666)
Q Consensus 473 ~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~ 552 (666)
+++|+| +++..++.+. .|||+++|++++.||+++++.+++.| .++||+|||+++++++|.++++||.||+||+ +
T Consensus 340 ~v~i~d-~~~~~~~~g~---~Gel~i~~~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~-~ 413 (508)
T TIGR02262 340 RLRLVG-DGGQDVAAGE---PGELLISGPSSATMYWNNRAKTRDTF-QGEWTRSGDKYVRNDDGSYTYAGRTDDMLKV-S 413 (508)
T ss_pred EEEEEC-CCCCCCCCCC---eeEEEEecCccccccCCCHHHhHhhh-hcCceeccceEEEcCCccEEEeccccceeee-C
Confidence 999999 7777776665 89999999999999999999999988 6899999999999999999999999999998 7
Q ss_pred eeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC---------hhHHHHHHHHcCCCcccccccccCcchh
Q 005991 553 GEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD---------PDVLKDWAASQGIKVIYCFSFRANSHVI 620 (666)
Q Consensus 553 G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~---------~~~l~~~~~~~~l~~~~~~~~~~p~~i~ 620 (666)
|++|+|.+||+.+.++|+|.++++++.++. +.+++++++. .++++++++++ ++ .+++|..+.
T Consensus 414 G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~-l~-----~~~~p~~i~ 487 (508)
T TIGR02262 414 GIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKAFIVLRPGQDIDTALETELKEHVKDR-LA-----PYKYPRWIV 487 (508)
T ss_pred CEEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeEEEEEeCCCCccccccHHHHHHHHHHh-cc-----cCCCCceEE
Confidence 999999999999999999999999996543 4677888752 35778888888 88 899999998
Q ss_pred HHH-HHHHHhhhhhhhhhcc
Q 005991 621 FIA-LIHNLCQLYSSKELFR 639 (666)
Q Consensus 621 ~v~-~~~~~~gK~~r~~l~~ 639 (666)
+++ +|++.+||++|++|++
T Consensus 488 ~~~~iP~t~~gKi~r~~l~~ 507 (508)
T TIGR02262 488 FVDDLPKTATGKIQRFKLRE 507 (508)
T ss_pred EecCCCCCCCCcEehhhccC
Confidence 884 7888889999999876
No 87
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.9e-64 Score=556.38 Aligned_cols=490 Identities=21% Similarity=0.277 Sum_probs=386.3
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCCHhHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGL-QKGVRIGLYLINRPEWLIVDHA 157 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv-~~gd~V~i~~~n~~e~~~~~lA 157 (666)
.|+.++|..++ .|+++|+.+. + ..+||.||.++++++|.+|.+.|+ ++||+|+++++|+++|+++++|
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~---~------~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA 71 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYG---D------RTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAA 71 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEEC---C------ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHH
Confidence 47888887754 7999999753 2 259999999999999999999999 7999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehH
Q 005991 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYL 237 (666)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (666)
|+++|++++|+++.++.+++.+++++++++++|++......+.+.. .+.++.++ ++.. .+.
T Consensus 72 ~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~--~~~~~~i~-~~~~----------------~~~ 132 (540)
T PRK13388 72 AALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD--LPGVRVLD-VDTP----------------AYA 132 (540)
T ss_pred HHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc--ccCceEEE-ccch----------------hhh
Confidence 9999999999999999999999999999999999877665544321 23333332 2210 122
Q ss_pred HHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHH-
Q 005991 238 QLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQI- 316 (666)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~- 316 (666)
+++..... ..+.....++++++++|||||||.||||+++|+++...+......+++.++|++++.+|++|.+++...+
T Consensus 133 ~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~ 211 (540)
T PRK13388 133 ELVAAAGA-LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWA 211 (540)
T ss_pred hhhccccC-cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHH
Confidence 22221111 1122235679999999999999999999999999998887777778899999999999999999887744
Q ss_pred HHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCCh
Q 005991 317 VSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSK 395 (666)
Q Consensus 317 ~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~ 395 (666)
.++..|+++++.+ .++..+++.++++++|++..+|..+..+...... + .
T Consensus 212 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~-----------------------------~-~ 261 (540)
T PRK13388 212 PAVASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPER-----------------------------P-D 261 (540)
T ss_pred HHHHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCC-----------------------------c-c
Confidence 5789999998877 7899999999999999999999998776542000 0 0
Q ss_pred hhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCccCcEEE
Q 005991 396 MWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIK 475 (666)
Q Consensus 396 ~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~ 475 (666)
....+++.+ + |++++++....+.+.+++++++.||+||++.+++.. .....+++|+|++|+++
T Consensus 262 ------------~~~~~l~~~-~-G~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~--~~~~~~~vG~p~~g~~i- 324 (540)
T PRK13388 262 ------------DADNPLRVA-F-GNEASPRDIAEFSRRFGCQVEDGYGSSEGAVIVVRE--PGTPPGSIGRGAPGVAI- 324 (540)
T ss_pred ------------ccccceEEE-E-CCCCCHHHHHHHHHHhCCceecccccccccceeecC--CCCCCCCCCCCCCCcEE-
Confidence 000256643 3 556678888888888899999999999998655432 23456789999999765
Q ss_pred EEecCCCCCCCC------C----CCCCccEEEEe-CCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccC
Q 005991 476 LVDVPEMNYTSE------D----QPHPRGEICVR-GPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRK 544 (666)
Q Consensus 476 ivd~~~~~~~~~------~----~~~~~GEl~v~-g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~ 544 (666)
++.++...++. + .++..|||+++ |++++.||+++|+.|++.| .+|||+|||+|++|+||+++++||+
T Consensus 325 -~~~~~~~~~~~~~~d~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~-~~g~~~TGD~~~~~~dg~l~i~GR~ 402 (540)
T PRK13388 325 -YNPETLTECAVARFDAHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAERM-RHGMYWSGDLAYRDADGWIYFAGRT 402 (540)
T ss_pred -EcCCCCccccceeccCccccccCCCcceEEEEecCCcccccccCChHHHHHHh-hcCceeccceEEEcCCCcEEEeccC
Confidence 33222111110 0 12248999998 9999999999999999999 6899999999999999999999999
Q ss_pred CCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHc-CCCcccccccc
Q 005991 545 KNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQ-GIKVIYCFSFR 614 (666)
Q Consensus 545 ~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~-~l~~~~~~~~~ 614 (666)
||+||+ +|++|+|.+||+++.+||+|.+|+|++.+++ +.+++++++. .++++++++.+ .++ .++
T Consensus 403 ~d~i~~-~G~~v~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~l~~~~~l~-----~~~ 476 (540)
T PRK13388 403 ADWMRV-DGENLSAAPIERILLRHPAINRVAVYAVPDERVGDQVMAALVLRDGATFDPDAFAAFLAAQPDLG-----TKA 476 (540)
T ss_pred CceEEE-CCEEeCHHHHHHHHHhCCCceEEEEEEccCCCCCceeEEEEEECCCCcCCHHHHHHHHHhhccCC-----ccc
Confidence 999997 8999999999999999999999999997654 4667777643 45788888754 366 899
Q ss_pred cCcchhHHH-HHHHHhhhhhhhhhccchhhhhcCCCccceehh
Q 005991 615 ANSHVIFIA-LIHNLCQLYSSKELFRSRCCYRTGRDSSVFCQE 656 (666)
Q Consensus 615 ~p~~i~~v~-~~~~~~gK~~r~~l~~~~~~~~~~~~~~~~~~~ 656 (666)
+|..+.+++ +|++.+||++|++|++.. .-.++...+|++.
T Consensus 477 ~P~~~~~v~~iP~t~~GKv~R~~L~~~~--~~~~~~~~~~~~~ 517 (540)
T PRK13388 477 WPRYVRIAADLPSTATNKVLKRELIAQG--WATGDPVTLWVRR 517 (540)
T ss_pred CCcEEEEeccCCCCCcceeeHHhHHHhc--cCCCCCceEEEcC
Confidence 999999885 888888999999998753 3344555666655
No 88
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-63 Score=553.82 Aligned_cols=486 Identities=25% Similarity=0.334 Sum_probs=403.9
Q ss_pred CCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005991 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (666)
Q Consensus 78 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA 157 (666)
..|+.++|.++++++|+++|+.+. + +.+||.||.++++++|..|.+.|+++|++|+++++|+++|+++++|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la 81 (524)
T PRK06188 11 GATYGHLLVSALKRYPDRPALVLG---D------TRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGA 81 (524)
T ss_pred CccHHHHHHHHHHHCCCCeEEEEC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 458999999999999999999763 2 3599999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccc-cHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEeh
Q 005991 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQ-TLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (666)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (666)
|+++|++++|+++.++.+++.++++.++++.+++++. ....+.+.....+.+..++.++..... ...
T Consensus 82 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~ 149 (524)
T PRK06188 82 AQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDG------------VDL 149 (524)
T ss_pred HHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccch------------hhH
Confidence 9999999999999999999999999999999999876 444444444445555555554432100 011
Q ss_pred HHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHH
Q 005991 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQI 316 (666)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~ 316 (666)
.+....... ........++++++|+|||||||.||+|++||.++.+.+......+++..+|++++.+|++|.+++. .+
T Consensus 150 ~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~ 227 (524)
T PRK06188 150 LAAAAKFGP-APLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-FL 227 (524)
T ss_pred HHhhhccCc-ccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH-HH
Confidence 111110000 0111123456799999999999999999999999999888877778889999999999999998874 56
Q ss_pred HHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCCh
Q 005991 317 VSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSK 395 (666)
Q Consensus 317 ~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~ 395 (666)
.+++.|+++++.+ .++..+++.++++++|++.++|+++..+.+.....
T Consensus 228 ~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~------------------------------- 276 (524)
T PRK06188 228 PTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLR------------------------------- 276 (524)
T ss_pred HHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCcc-------------------------------
Confidence 7789999999987 78999999999999999999999998886531000
Q ss_pred hhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCC------CCCCCccCCc
Q 005991 396 MWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD------NLSGHVGSPN 469 (666)
Q Consensus 396 ~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~------~~~~~vG~p~ 469 (666)
.....++|.+++||++++++....+.+.+++.+++.||+||++..++...... ...+++|+|+
T Consensus 277 -----------~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~ 345 (524)
T PRK06188 277 -----------TRDLSSLETVYYGASPMSPVRLAEAIERFGPIFAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPT 345 (524)
T ss_pred -----------CCCCcceeEEEEcCCCCCHHHHHHHHHHhCchhhheeCccccCCceeecCchhccccccccCCcccccc
Confidence 00014899999999999999988888888999999999999976555433221 3457899999
Q ss_pred cCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEE
Q 005991 470 PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (666)
Q Consensus 470 ~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ik 549 (666)
++++++|+| +++..++.+. .|||+++|+.++.||+++++.+.+.| .+|||+|||+|++++||.+++.||.+|+||
T Consensus 346 ~g~~v~i~~-~~~~~~~~g~---~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~ 420 (524)
T PRK06188 346 PGLRVALLD-EDGREVAQGE---VGEICVRGPLVMDGYWNRPEETAEAF-RDGWLHTGDVAREDEDGFYYIVDRKKDMIV 420 (524)
T ss_pred CCcEEEEEc-CCCCCCCCCC---eeEEEEECcchhhhhcCChHHhhhhh-cCCceeecceEEEcCCccEEEEecccccee
Confidence 999999999 4566666554 89999999999999999999999998 789999999999999999999999999999
Q ss_pred cCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcchh
Q 005991 550 LAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSHVI 620 (666)
Q Consensus 550 l~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~i~ 620 (666)
+ +|++|+|.+||++|.+|++|.+++|++.+++ +.++++++++ .++++++++++ ++ .+++|..|+
T Consensus 421 ~-~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~-----~~~~p~~i~ 493 (524)
T PRK06188 421 T-GGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAVTAVVVLRPGAAVDAAELQAHVKER-KG-----SVHAPKQVD 493 (524)
T ss_pred c-CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceEEEEEEECCCCCCCHHHHHHHHHHh-cc-----cCCCCcEEE
Confidence 7 8999999999999999999999999997654 5788888863 36889999988 87 899999999
Q ss_pred HHH-HHHHHhhhhhhhhhccc
Q 005991 621 FIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 621 ~v~-~~~~~~gK~~r~~l~~~ 640 (666)
+++ +|++.+||++|++|++.
T Consensus 494 ~v~~~P~t~~gKi~r~~L~~~ 514 (524)
T PRK06188 494 FVDSLPLTALGKPDKKALRAR 514 (524)
T ss_pred EecCCCCCccccccHHHHHHH
Confidence 995 88888899999998765
No 89
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-63 Score=549.76 Aligned_cols=463 Identities=21% Similarity=0.295 Sum_probs=379.1
Q ss_pred HHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeE
Q 005991 86 IYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYIS 165 (666)
Q Consensus 86 ~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 165 (666)
+.+++.+||++|+.+. .++ ..+||+||.++++++|.+|.+.|+++|++|+++++|+++|+++++||+++|+++
T Consensus 2 ~~~a~~~p~~~a~~~~--~~~-----~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 74 (488)
T PRK09088 2 AFHARLQPQRLAAVDL--ALG-----RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIY 74 (488)
T ss_pred chhhhhCCCceEEEec--CCC-----cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 3567889999998652 011 459999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCCC
Q 005991 166 VPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCS 245 (666)
Q Consensus 166 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (666)
+|+++.++.+++.+++++++++++|+++..... .. .. +.++++......
T Consensus 75 v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~------~~----~~---------------------~~~~~~~~~~~~ 123 (488)
T PRK09088 75 VPLNWRLSASELDALLQDAEPRLLLGDDAVAAG------RT----DV---------------------EDLAAFIASADA 123 (488)
T ss_pred EeeCccCCHHHHHHHHHhCCCCEEEEcchhhcc------cc----cc---------------------cchhhhhhhccc
Confidence 999999999999999999999999997643210 00 00 111111111000
Q ss_pred -CCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHH-HHHHHHhCc
Q 005991 246 -SPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-QIVSVYYGV 323 (666)
Q Consensus 246 -~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~ 323 (666)
.........++++++++|||||||.||+|.+||+++...+..+.....+..+|++++.+|++|.+++.. ++.++..|+
T Consensus 124 ~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~ 203 (488)
T PRK09088 124 LEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGG 203 (488)
T ss_pred cccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCC
Confidence 011112345688999999999999999999999999887776666667788999999999999999887 456788899
Q ss_pred EEEEec-CCHHHHHHHHH--hhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHH
Q 005991 324 AVGFYQ-GDNLKLMDDLA--VLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRL 400 (666)
Q Consensus 324 ~~~~~~-~~~~~~~~~i~--~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~ 400 (666)
++++.+ .++..++..+. ++++|+++++|+++..+.+.... +.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~----------------------------------~~- 248 (488)
T PRK09088 204 SILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGF----------------------------------DA- 248 (488)
T ss_pred EEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCc----------------------------------Cc-
Confidence 998876 68888888886 48899999999999877542000 00
Q ss_pred hhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCC---CCCCCCCccCCccCcEEEEE
Q 005991 401 VFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDK---GDNLSGHVGSPNPACEIKLV 477 (666)
Q Consensus 401 ~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~---~~~~~~~vG~p~~~~~v~iv 477 (666)
...+++|.+++||++++.+..+.+... |+++++.||+||++........ .....+++|.|.|+++++|+
T Consensus 249 -------~~~~~l~~~~~gG~~~~~~~~~~~~~~-g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~ 320 (488)
T PRK09088 249 -------AALRHLTALFTGGAPHAAEDILGWLDD-GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVV 320 (488)
T ss_pred -------cccccceEEEecCCCCCHHHHHHHHHh-CCceeeeecccccccccccCCCcccccccCCccccCCCCcEEEEE
Confidence 001379999999999999988877753 8999999999999865432211 12356789999999999999
Q ss_pred ecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeec
Q 005991 478 DVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVA 557 (666)
Q Consensus 478 d~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~ 557 (666)
| +++..++.+. .|||+|+|++++.||+++++.|++.|+.+|||+|||+|+++++|.++|.||.||+||+ +|++|+
T Consensus 321 d-~~~~~~~~g~---~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~-~G~~i~ 395 (488)
T PRK09088 321 D-DQGNDCPAGV---PGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFIS-GGENVY 395 (488)
T ss_pred C-CCCCCCcCCC---ceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceEEe-CCEEEC
Confidence 9 5566665554 8999999999999999999999999988999999999999999999999999999997 899999
Q ss_pred cHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcchhHHH-HHHH
Q 005991 558 PEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHN 627 (666)
Q Consensus 558 p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~ 627 (666)
|.+||++|.++|+|.+++|++.+++ +..+++|+++ .+++.++++++ ++ .+++|..|.+++ +|++
T Consensus 396 ~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~-----~~~~p~~i~~~~~iP~t 469 (488)
T PRK09088 396 PAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAIVPADGAPLDLERIRSHLSTR-LA-----KYKVPKHLRLVDALPRT 469 (488)
T ss_pred HHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEEEECCCCCCCHHHHHHHHHhh-Cc-----CCCCCCEEEEcccCCCC
Confidence 9999999999999999999997653 5677888763 46788999988 87 899999999995 7778
Q ss_pred Hhhhhhhhhhccc
Q 005991 628 LCQLYSSKELFRS 640 (666)
Q Consensus 628 ~~gK~~r~~l~~~ 640 (666)
.+||++|++|++.
T Consensus 470 ~~gKi~r~~l~~~ 482 (488)
T PRK09088 470 ASGKLQKARLRDA 482 (488)
T ss_pred CCCceeHHHHHHH
Confidence 7899999999875
No 90
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-63 Score=561.87 Aligned_cols=490 Identities=22% Similarity=0.296 Sum_probs=386.6
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
...|+.++|.+.++++||++|+++. + +.+||+||.++++++|.+|.+.|+++|++|+++++|+++|+++++
T Consensus 35 ~~~tl~~~l~~~a~~~p~~~Ai~~~---~------~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~l 105 (600)
T PRK08279 35 SKRSLGDVFEEAAARHPDRPALLFE---D------QSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWL 105 (600)
T ss_pred CcccHHHHHHHHHHhCCCCcEEEeC---C------CcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4568999999999999999999864 3 349999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEeh
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (666)
||+++|++++|+++.++.+++.+++++++++++|++.+..+.+.+..........++..++.... ....+
T Consensus 106 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 175 (600)
T PRK08279 106 GLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLD----------DPEGY 175 (600)
T ss_pred HHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCcccc----------ccccH
Confidence 99999999999999999999999999999999999988777766655444433333333321100 01233
Q ss_pred HHHHhcCCCC----CCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHH
Q 005991 237 LQLQSQGCSS----PQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYER 312 (666)
Q Consensus 237 ~~~~~~~~~~----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~ 312 (666)
.++....... ........++++++|+|||||||.||||++||+++.+.+.+....+++.++|++++.+|++|.+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~ 255 (600)
T PRK08279 176 EDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGG 255 (600)
T ss_pred HHHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhH
Confidence 4443222111 111233467899999999999999999999999999999888777889999999999999999999
Q ss_pred HHHH-HHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcC
Q 005991 313 ANQI-VSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSG 390 (666)
Q Consensus 313 ~~~~-~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~ 390 (666)
...+ .++..|+++++.+ +++..+++.++++++|++.++|+++..+.......
T Consensus 256 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~-------------------------- 309 (600)
T PRK08279 256 TVAWSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKP-------------------------- 309 (600)
T ss_pred HHHHHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCc--------------------------
Confidence 8754 5677888888876 79999999999999999999999988776421000
Q ss_pred CCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCC-ccccCcccchhhhhhhccCCCCCCCCCccCCc
Q 005991 391 QTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGC-QVMEGYGMTETSCIISAIDKGDNLSGHVGSPN 469 (666)
Q Consensus 391 ~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~-~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~ 469 (666)
. ....++|.+ +|+++++++.+.|.+.++. .+++.||+||++..++.. ....+++|.+.
T Consensus 310 ---~-------------~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~---~~~~~~~g~~~ 368 (600)
T PRK08279 310 ---T-------------DRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFINV---FNFDGTVGRVP 368 (600)
T ss_pred ---c-------------ccCcceeEE--ecCCCCHHHHHHHHHHhCcceeeeeecccccceeeccc---CCCCccccccc
Confidence 0 000356654 4777999999999988876 599999999987533221 23456778766
Q ss_pred c----CcEEEEEecCCCC-------CCCCCCCCCccEEE--EeCCCcCccccCChhhhhhcc------CCCCeeecccEE
Q 005991 470 P----ACEIKLVDVPEMN-------YTSEDQPHPRGEIC--VRGPIVFQGYYKNEVQTREVI------DGDGWLHTGDIG 530 (666)
Q Consensus 470 ~----~~~v~ivd~~~~~-------~~~~~~~~~~GEl~--v~g~~v~~GY~~~~~~t~~~~------~~~gw~~TGDlg 530 (666)
+ +..+...+.+.+. ......+++.|||+ ++|++++.|| ++++.|++.| +.++||+|||+|
T Consensus 369 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg 447 (600)
T PRK08279 369 LWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLM 447 (600)
T ss_pred ccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCccccccc-CCchhhHHHHhhcccCCCCceEeecceE
Confidence 6 4433322211111 11112334589998 7899999999 9999998876 246899999999
Q ss_pred EEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC----CeEEEEEE-c-----ChhHHHHHH
Q 005991 531 LWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN----SCLVAIVA-V-----DPDVLKDWA 600 (666)
Q Consensus 531 ~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~----~~~va~vv-~-----~~~~l~~~~ 600 (666)
++++||.|++.||.||+||+ +|++|+|.|||+++.+||+|.+|+|+|.++. ...+++|+ . +.+++++++
T Consensus 448 ~~~~dG~l~~~GR~~d~ik~-~G~~i~p~eIE~~l~~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~l 526 (600)
T PRK08279 448 RDDGFGHAQFVDRLGDTFRW-KGENVATTEVENALSGFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGAEFDLAALAAHL 526 (600)
T ss_pred EEcCCccEEEecccCCeEEE-CCcccCHHHHHHHHhcCCCcceEEEEEeecCCCCCccceeEEEecCCccCCHHHHHHHH
Confidence 99999999999999999997 8999999999999999999999999986532 33444444 3 347899999
Q ss_pred HHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 601 ASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 601 ~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
+++ |+ .|++|..+++++ +|++.+||++|++|++.
T Consensus 527 ~~~-L~-----~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 561 (600)
T PRK08279 527 YER-LP-----AYAVPLFVRLVPELETTGTFKYRKVDLRKE 561 (600)
T ss_pred Hhh-Cc-----cccCCeEEEeecCCCCCcchhhhHHHHhhc
Confidence 998 98 999999999995 88888899999999887
No 91
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.2e-62 Score=548.49 Aligned_cols=498 Identities=26% Similarity=0.350 Sum_probs=395.1
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
...++.++|.+.++.+|+++|+.+. + +.+||.||.++++++|.+|.+.|+++|++|+++++|+++|+++++
T Consensus 19 ~~~~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~l 89 (541)
T TIGR03205 19 ARGTLPDLLSKAAADYGPRPALEFR---D------RPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFF 89 (541)
T ss_pred CCCCHHHHHHHHHHHcCCCceEEEC---C------cEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHH
Confidence 4568999999999999999999753 2 359999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEcccc--HHHHHHhhhcCCCceEEEEeCCCCCCCCCC--C-CCCCc
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT--LNTLLSFISEIPSVHLIVVVGGKDEHLPSL--P-STSGV 231 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~--~-~~~~~ 231 (666)
||+++|++++|+++.++.+++.+++++++++.+|+++.. ...+.+.... ..+..+++.+......... . .....
T Consensus 90 a~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (541)
T TIGR03205 90 GALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEK-GLLDRLIVCEDDNWGKVGTPQAPIPADP 168 (541)
T ss_pred HHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhc-ccceEEEEecccccccccccccccCCCc
Confidence 999999999999999999999999999999999997531 1222222111 1133444443321000000 0 00112
Q ss_pred EEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccc-----ccccCCCcEEEEcCCh
Q 005991 232 KLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL-----MVQFYPSDIYMSYLPL 306 (666)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~-----~~~~~~~d~~l~~~pl 306 (666)
...+++++...... ........++++++++|||||||.||||+++|+++......... .......+++++.+|+
T Consensus 169 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~ 247 (541)
T TIGR03205 169 RIVTYADFVKGAAA-PAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPL 247 (541)
T ss_pred ccccHHHHHhcCCC-CCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccH
Confidence 24556666653322 12223456789999999999999999999999998765542211 1122345799999999
Q ss_pred HHHHHHHH-HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 005991 307 AHIYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKK 384 (666)
Q Consensus 307 ~h~~~~~~-~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~ 384 (666)
+|.+++.. .+.++..|+++++.. .++..+++.|+++++|++.++|+++..+.+... .
T Consensus 248 ~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~------------------- 306 (541)
T TIGR03205 248 FHIYALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPS--L------------------- 306 (541)
T ss_pred HHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCcc--c-------------------
Confidence 99998876 567889999988877 799999999999999999999999987754100 0
Q ss_pred HHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC-CCCCC
Q 005991 385 QAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSG 463 (666)
Q Consensus 385 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~-~~~~~ 463 (666)
......++|.+++||+++++++.+++.+.++.++++.||+||++..++..... ....+
T Consensus 307 ---------------------~~~~~~~l~~i~~gg~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~ 365 (541)
T TIGR03205 307 ---------------------EKRDLSSLATIGSGGAPLPVEVANFFERKTGLKLKSGWGMTETCSPGTGHPPEGPDKPG 365 (541)
T ss_pred ---------------------cccCccccceEEEccccCCHHHHHHHHHHhCCCeecccccccCCcccccCCCCCCCCCC
Confidence 00001379999999999999999999988899999999999998766554332 24567
Q ss_pred CccCCccCcEEEEEecC-CCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEc
Q 005991 464 HVGSPNPACEIKLVDVP-EMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIID 542 (666)
Q Consensus 464 ~vG~p~~~~~v~ivd~~-~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~G 542 (666)
++|.|+++++++|++.+ +++.++.+ +.|||+++|++++.||+++|+.|++.| .++||+|||+|+++++|+++++|
T Consensus 366 ~~G~~~~~~~~~v~~~d~~~~~~~~g---~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~l~i~G 441 (541)
T TIGR03205 366 SIGLMLPGIELDVVSLDDPTKVLPPG---EVGELRIRGPNVTRGYWNRPEESAEAF-VGDRFLTGDIGYMDTDGYFFLVD 441 (541)
T ss_pred CcceeccCceeEEEecCCCCccCCCC---CeeEEEEecCCccccccCChhhhHhhh-ccCCcccCceEEEcCCceEEEEc
Confidence 89999999999987643 34444444 489999999999999999999999998 58899999999999999999999
Q ss_pred cCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC-------hhHHHHHHHHcCCCcccccc
Q 005991 543 RKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD-------PDVLKDWAASQGIKVIYCFS 612 (666)
Q Consensus 543 R~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~-------~~~l~~~~~~~~l~~~~~~~ 612 (666)
|.||+||+ +|++|+|.+||+++.+|++|.+++|++.+++ +.++++++++ .+++.++++++ ++ .
T Consensus 442 R~~~~i~~-~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~-l~-----~ 514 (541)
T TIGR03205 442 RKKDMIIS-GGFNVYPQMIEQAIYEHPGVQEVIVIGIPDQYRGEAAKAFVKLRPGAKPFSLDELRAFLAGK-LG-----K 514 (541)
T ss_pred cccCeEEE-CCEEECHHHHHHHHHhCCCeeeEEEEecCCcccCceEEEEEEECCCCCcCCHHHHHHHHHhh-cc-----c
Confidence 99999996 8999999999999999999999999987643 5688888753 46788899988 87 8
Q ss_pred cccCcchhHHH-HHHHHhhhhhhhhhc
Q 005991 613 FRANSHVIFIA-LIHNLCQLYSSKELF 638 (666)
Q Consensus 613 ~~~p~~i~~v~-~~~~~~gK~~r~~l~ 638 (666)
|++|+.|.+++ +|.+.+||++|++|+
T Consensus 515 ~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 515 HELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred ccCCcEEEEeccCCCCcccceeHhhcC
Confidence 99999999995 777878999999874
No 92
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=3.9e-63 Score=554.96 Aligned_cols=500 Identities=25% Similarity=0.364 Sum_probs=401.0
Q ss_pred CCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLL-FHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 78 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~-~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
..++.++|.++++++|+++|+++. + +.+||+||.++++++|..|. +.|+++|++|+++++|+++++++++
T Consensus 24 ~~~~~~~l~~~~~~~~~~~a~~~~---~------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~l 94 (560)
T PRK08751 24 FRTVAEVFATSVAKFADRPAYHSF---G------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATF 94 (560)
T ss_pred CCcHHHHHHHHHHhCCCCceEEEC---C------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHH
Confidence 468999999999999999999753 2 35999999999999999997 6899999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCC-CC-------------
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDE-HL------------- 222 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~-~~------------- 222 (666)
||+++|++++|++|.++.+++.+++++++++++++++.....+.......+ ...++..+.... ..
T Consensus 95 A~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (560)
T PRK08751 95 GVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTP-VKQVITTGLGDMLGFPKAALVNFVVKYV 173 (560)
T ss_pred HHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCC-ccEEEEechhhhcccccchhhhhhhhhh
Confidence 999999999999999999999999999999999999877666655544443 233333221000 00
Q ss_pred CC-CCCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccc----cCC-
Q 005991 223 PS-LPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQ----FYP- 296 (666)
Q Consensus 223 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~----~~~- 296 (666)
.. ...........+.+....+.....+.....++++++++|||||||.||||++||+++...+......+. +.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~ 253 (560)
T PRK08751 174 KKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEG 253 (560)
T ss_pred hccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCC
Confidence 00 000000112345555444332222333456799999999999999999999999999887765444332 333
Q ss_pred CcEEEEcCChHHHHHHHH-HHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHH
Q 005991 297 SDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLRE 373 (666)
Q Consensus 297 ~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~ 373 (666)
.+++++.+|++|.+++.. .+.++..|++.++.. .++..+++.++++++|++.++|.++..+.+...
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----------- 322 (560)
T PRK08751 254 CEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPG----------- 322 (560)
T ss_pred CceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcC-----------
Confidence 367788999999999865 456677787776654 689999999999999999999999987765200
Q ss_pred HHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhh
Q 005991 374 KLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIIS 453 (666)
Q Consensus 374 ~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~ 453 (666)
.+...+ +++|.+++||+++++++.+.|++.+|+++++.||+||++..++
T Consensus 323 -----------------------~~~~~l--------~~lr~v~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~ 371 (560)
T PRK08751 323 -----------------------FDQIDF--------SSLKMTLGGGMAVQRSVAERWKQVTGLTLVEAYGLTETSPAAC 371 (560)
T ss_pred -----------------------cCCcch--------hhheeeeeCCCCCCHHHHHHHHHHhCCeEEEeeccccCCCcee
Confidence 000001 3799999999999999999999988999999999999987655
Q ss_pred ccCCC-CCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEE
Q 005991 454 AIDKG-DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLW 532 (666)
Q Consensus 454 ~~~~~-~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~ 532 (666)
..... ....+++|.|+++++++++| +++..++.+. .|||+++|+.++.||+++++.|++.|+.+|||+|||+|++
T Consensus 372 ~~~~~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~---~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~ 447 (560)
T PRK08751 372 INPLTLKEYNGSIGLPIPSTDACIKD-DAGTVLAIGE---IGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARM 447 (560)
T ss_pred cccccccccCCCcCccCCCceEEEEC-CCCCCCCCCC---ceEEEEecCccchhhcCChhhhhhccccCCCccccceEEE
Confidence 43322 24457899999999999999 6667666665 8999999999999999999999999988999999999999
Q ss_pred ecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc-----ChhHHHHHHHHcC
Q 005991 533 LPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV-----DPDVLKDWAASQG 604 (666)
Q Consensus 533 ~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~-----~~~~l~~~~~~~~ 604 (666)
+++|.+++.||.+|+||+ +|++|+|.+||+++..||+|.+|+|++.++. +.++++++. +.++++++++++
T Consensus 448 ~~~g~l~i~GR~~d~i~~-~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~ge~~~~~v~~~~~~~~~~~l~~~~~~~- 525 (560)
T PRK08751 448 DEQGFVYIVDRKKDMILV-SGFNVYPNEIEDVIAMMPGVLEVAAVGVPDEKSGEIVKVVIVKKDPALTAEDVKAHARAN- 525 (560)
T ss_pred cCCceEEEEeechhheeE-CCEEEcHHHHHHHHHhCcCeeeeEEEecCCCCCCceEEEEEEcCCCCCCHHHHHHHHHHh-
Confidence 999999999999999997 8999999999999999999999999997654 466777764 346888999988
Q ss_pred CCcccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 605 IKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 605 l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
++ .+++|..+.+++ +|++.+||++|++|++.
T Consensus 526 l~-----~~~~P~~v~~v~~lP~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 526 LT-----GYKQPRIIEFRKELPKTNVGKILRRELRDA 557 (560)
T ss_pred hh-----hccCCeEEEEhhhCCCCccccccHHHHHHh
Confidence 88 999999999996 88888899999999865
No 93
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-63 Score=544.30 Aligned_cols=449 Identities=23% Similarity=0.319 Sum_probs=375.6
Q ss_pred HHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEe
Q 005991 88 AVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVP 167 (666)
Q Consensus 88 ~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vp 167 (666)
.+.+.++++|+.+. + +.+||+||.++++++|..|. ++|+|+++++|+++|+++++||+++|++++|
T Consensus 9 ~~~~~~~~~a~~~~---~------~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~ 74 (471)
T PRK07787 9 VAAAADIADAVRIG---G------RVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVP 74 (471)
T ss_pred hhcccCCceEEEeC---C------cEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEee
Confidence 34566788998653 2 35999999999999999996 4799999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCCCCC
Q 005991 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSP 247 (666)
Q Consensus 168 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (666)
+++.++.+++.+++++++++.++++.... ...++.+... ... .++
T Consensus 75 l~~~~~~~~l~~~l~~~~~~~il~~~~~~------~~~~~~~~~~--~~~----------------~~~----------- 119 (471)
T PRK07787 75 VPPDSGVAERRHILADSGAQAWLGPAPDD------PAGLPHVPVR--LHA----------------RSW----------- 119 (471)
T ss_pred cCCCCChHHHHHHHHhcCCCEEEecCCcc------cccccceeee--ccc----------------ccc-----------
Confidence 99999999999999999999999976311 0111111100 000 000
Q ss_pred CCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHH-HHHHHHhCcEEE
Q 005991 248 QPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-QIVSVYYGVAVG 326 (666)
Q Consensus 248 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~ 326 (666)
.......++++++++|||||||.||||++||+++...+......+++.++|++++.+|++|.+++.. ++.++..|++++
T Consensus 120 ~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~ 199 (471)
T PRK07787 120 HRYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFV 199 (471)
T ss_pred ccCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEE
Confidence 0111245789999999999999999999999999998887777788889999999999999999886 678899999998
Q ss_pred Eec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHH
Q 005991 327 FYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKI 405 (666)
Q Consensus 327 ~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~ 405 (666)
+.+ .++..+++.++ +++|++.++|+++..+.+....
T Consensus 200 ~~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~------------------------------------------ 236 (471)
T PRK07787 200 HTGRPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEA------------------------------------------ 236 (471)
T ss_pred ecCCCCHHHHHHHHh-hCceEEEcchHHHHHHHhCccc------------------------------------------
Confidence 877 79999999999 9999999999999887652000
Q ss_pred HHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCccCcEEEEEecCCCCCC
Q 005991 406 RERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYT 485 (666)
Q Consensus 406 ~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~ivd~~~~~~~ 485 (666)
.. ...++|.+++||+++++++.++|.+.++.++++.||+||++...+.........+++|+|+++++++|+|. ++..+
T Consensus 237 ~~-~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~vG~~~~g~~~~i~d~-~~~~~ 314 (471)
T PRK07787 237 AR-ALRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLITLSTRADGERRPGWVGLPLAGVETRLVDE-DGGPV 314 (471)
T ss_pred cc-cccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCcceecCCCCcccCCcccccCCCcEEEEECC-CCCCC
Confidence 00 01479999999999999999999998999999999999998655444333445678999999999999994 45544
Q ss_pred CC-CCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccC-CCeEEcCCeeeeccHHHHH
Q 005991 486 SE-DQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRK-KNIFKLAQGEYVAPEKIEN 563 (666)
Q Consensus 486 ~~-~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~-~d~ikl~~G~~v~p~eIE~ 563 (666)
+. ++ ..|||+++|++++.||+++++.|++.|..+|||+|||+|++++||+++++||+ ||++|. +|++|+|.+||+
T Consensus 315 ~~~~~--~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~-~G~~v~~~eIE~ 391 (471)
T PRK07787 315 PHDGE--TVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGRESTDLIKS-GGYRIGAGEIET 391 (471)
T ss_pred CCCCC--CceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCCEEEeCCCCceeEee-CCEEECHHHHHH
Confidence 42 21 37999999999999999999999999988999999999999999999999996 899996 899999999999
Q ss_pred HHhcCcCcceEEEEEeCCC---CeEEEEEEc----ChhHHHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhh
Q 005991 564 VYAKCKFVLQCFIYGDSFN---SCLVAIVAV----DPDVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSK 635 (666)
Q Consensus 564 ~l~~~p~V~~~~V~g~~~~---~~~va~vv~----~~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~ 635 (666)
++.++|.|.+++|++.++. +.++++|++ +++++.++++++ ++ .+++|..+.+++ +|++.+||++|+
T Consensus 392 ~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~l~~~l~~~-l~-----~~~~P~~i~~~~~iP~~~~GKi~r~ 465 (471)
T PRK07787 392 ALLGHPGVREAAVVGVPDDDLGQRIVAYVVGADDVAADELIDFVAQQ-LS-----VHKRPREVRFVDALPRNAMGKVLKK 465 (471)
T ss_pred HHHhCCCcceEEEEcccccccCeEEEEEEEeCCCCCHHHHHHHHHhh-cc-----cccCCcEEEEeccCCCCCCccccHH
Confidence 9999999999999997654 578999886 567899999988 88 899999999885 888888999999
Q ss_pred hhcc
Q 005991 636 ELFR 639 (666)
Q Consensus 636 ~l~~ 639 (666)
+|++
T Consensus 466 ~L~~ 469 (471)
T PRK07787 466 QLLS 469 (471)
T ss_pred Hhcc
Confidence 9976
No 94
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.6e-63 Score=551.93 Aligned_cols=500 Identities=23% Similarity=0.348 Sum_probs=393.7
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
..+++.++|...+..+|+++|+.+. + +.+||+||.+++.++|++|.+.|+++||+|+++++|+++++++++
T Consensus 22 ~~~~~~~~~~~~a~~~p~~~a~~~~---~------~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~l 92 (563)
T PRK06710 22 DIQPLHKYVEQMASRYPEKKALHFL---G------KDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYY 92 (563)
T ss_pred CcccHHHHHHHHHHHCCCceEEEec---C------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHH
Confidence 3468999999999999999999764 2 359999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCC-CCCCC-----CCCC--
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKD-EHLPS-----LPST-- 228 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~-~~~~~-----~~~~-- 228 (666)
||+++|++++|++|.++.+++.++++.++++++++++.....+...... .....++...... ...+. ....
T Consensus 93 A~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (563)
T PRK06710 93 GTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSA-TKIEHVIVTRIADFLPFPKNLLYPFVQKKQ 171 (563)
T ss_pred HHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchh-hccceeEEeccccccccccccccchhhccc
Confidence 9999999999999999999999999999999999987655444332211 1122222211000 00000 0000
Q ss_pred --------CCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccc-ccccC-CCc
Q 005991 229 --------SGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL-MVQFY-PSD 298 (666)
Q Consensus 229 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~-~~~~~-~~d 298 (666)
.......|..+.... ..........++++++++|||||||.||||.+||+++......... .++.. .++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~ 250 (563)
T PRK06710 172 SNLVVKVSESETIHLWNSVEKEV-NTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEE 250 (563)
T ss_pred ccccccccccchhhhhhhhhhcc-ccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCc
Confidence 000000122221111 1011111123578999999999999999999999998755432222 23333 356
Q ss_pred EEEEcCChHHHHHHHH-HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHH
Q 005991 299 IYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLF 376 (666)
Q Consensus 299 ~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~ 376 (666)
++++.+|++|.+++.. .+.+++.|+++++.+ .++..+++.|+++++|++.++|+++..+.......
T Consensus 251 ~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~------------ 318 (563)
T PRK06710 251 VVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLK------------ 318 (563)
T ss_pred eEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccc------------
Confidence 8899999999999876 456888999998876 69999999999999999999999998876421000
Q ss_pred HHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccC
Q 005991 377 TAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAID 456 (666)
Q Consensus 377 ~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~ 456 (666)
..+ .+++|.+++||+++++++.+++++.+++++++.||+||++..+....
T Consensus 319 -------------------~~~-----------~~~lr~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~ 368 (563)
T PRK06710 319 -------------------EYD-----------ISSIRACISGSAPLPVEVQEKFETVTGGKLVEGYGLTESSPVTHSNF 368 (563)
T ss_pred -------------------cCC-----------hhhhhheeeCCCcCCHHHHHHHHHhhCCCEecccccccCccccccCc
Confidence 000 03789999999999999999999988999999999999987554332
Q ss_pred C-CCCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecC
Q 005991 457 K-GDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPG 535 (666)
Q Consensus 457 ~-~~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~d 535 (666)
. .....+++|+|.++++++++|++++..++.+. .|||+++|+.++.||+++++.|...| .+|||+|||+|+++++
T Consensus 369 ~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~~~~~~-~~g~~~TGD~~~~~~~ 444 (563)
T PRK06710 369 LWEKRVPGSIGVPWPDTEAMIMSLETGEALPPGE---IGEIVVKGPQIMKGYWNKPEETAAVL-QDGWLHTGDVGYMDED 444 (563)
T ss_pred ccccccCCccCCCCCCCeEEEEECCCCccCCCCC---ceEEEEecCccchhhhCChHHHhhhc-ccCcccccceEEEcCC
Confidence 2 22345789999999999999977777676665 89999999999999999999999988 6899999999999999
Q ss_pred CcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc------ChhHHHHHHHHcCCC
Q 005991 536 GRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV------DPDVLKDWAASQGIK 606 (666)
Q Consensus 536 G~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~------~~~~l~~~~~~~~l~ 606 (666)
|.++++||.||+||+ +|++|+|.+||+++.+||.|.+++|++.++. +.++++|++ +.++++++++++ ++
T Consensus 445 g~~~~~GR~dd~i~~-~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~ 522 (563)
T PRK06710 445 GFFYVKDRKKDMIVA-SGFNVYPREVEEVLYEHEKVQEVVTIGVPDPYRGETVKAFVVLKEGTECSEEELNQFARKY-LA 522 (563)
T ss_pred CcEEEeeccccEEEE-CCEEECHHHHHHHHHhCcceeeEEEEccccCCcCceeEEEEEECCCCCCCHHHHHHHHHHh-cc
Confidence 999999999999997 8999999999999999999999999997653 578888875 356888999988 88
Q ss_pred cccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 607 VIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 607 ~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
.+++|..+.+++ +|.+.+||++|++|++.
T Consensus 523 -----~~~~P~~~~~v~~iP~t~~GKi~r~~L~~~ 552 (563)
T PRK06710 523 -----AYKVPKVYEFRDELPKTTVGKILRRVLIEE 552 (563)
T ss_pred -----cccCCcEEEEcccCCCCccchhhHHHHHHH
Confidence 999999999996 88888899999999764
No 95
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.3e-62 Score=542.99 Aligned_cols=469 Identities=19% Similarity=0.226 Sum_probs=381.6
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
...++.+.|.++++++||++|+.+. ++ .+||+||.++++++|++|.+.|+++||+|+++++|++++++++|
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~~---~~------~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~l 103 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIIDD---DG------ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVF 103 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEeC---CC------cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 3468999999999999999999753 22 49999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEeh
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (666)
||+++|++++|+++.++.+++.+++++++++.+++++...+.+..... .++.++...
T Consensus 104 a~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~------~~~~~~~~~----------------- 160 (516)
T PRK13383 104 AVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADD------AVAVIDPAT----------------- 160 (516)
T ss_pred HHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhc------ceEEeccch-----------------
Confidence 999999999999999999999999999999999998876655443211 122222110
Q ss_pred HHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHH--HHhhcccccccCCCcEEEEcCChHHHHHHHH
Q 005991 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLIS--NVAGFSLMVQFYPSDIYMSYLPLAHIYERAN 314 (666)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~--~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~ 314 (666)
..... ....+...++.++|+|||||||.||||++||..... ........+++.++|++++.+|++|.+++..
T Consensus 161 ~~~~~------~~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~ 234 (516)
T PRK13383 161 AGAEE------SGGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGM 234 (516)
T ss_pred hhhhc------CCCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHH
Confidence 00000 001112345678999999999999999999984321 1112223456788999999999999999988
Q ss_pred HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCC
Q 005991 315 QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTP 393 (666)
Q Consensus 315 ~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~ 393 (666)
.+.++..|+++++.. .++..+++.++++++|.+.++|.++..+........ .
T Consensus 235 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-~-------------------------- 287 (516)
T PRK13383 235 LMLTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVR-A-------------------------- 287 (516)
T ss_pred HHHHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhcccccc-c--------------------------
Confidence 888899999998776 799999999999999999999999988765211000 0
Q ss_pred ChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC-CCCCCCccCCccCc
Q 005991 394 SKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPAC 472 (666)
Q Consensus 394 ~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~ 472 (666)
....+++|.+++||+++++++.+.|.+.+++.+++.||+||++..+...... ....+++|+|++++
T Consensus 288 -------------~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~ 354 (516)
T PRK13383 288 -------------RNPLPQLRVVMSSGDRLDPTLGQRFMDTYGDILYNGYGSTEVGIGALATPADLRDAPETVGKPVAGC 354 (516)
T ss_pred -------------cCCCCceEEEEECCCCCCHHHHHHHHHHcCchhhhcccccccccceeccccccccCCCcccCCCCCc
Confidence 0001479999999999999999999999999999999999998654433221 23467899999999
Q ss_pred EEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCC
Q 005991 473 EIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQ 552 (666)
Q Consensus 473 ~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~ 552 (666)
+++|+| ++++.++.+ +.|||+++|+.++.||++++. +.+ .+|||+|||+|++|++|+++++||.||+||+ +
T Consensus 355 ~~~i~d-~~~~~~~~g---~~Gel~v~g~~~~~~Y~~~~~---~~~-~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~-~ 425 (516)
T PRK13383 355 PVRILD-RNNRPVGPR---VTGRIFVGGELAGTRYTDGGG---KAV-VDGMTSTGDMGYLDNAGRLFIVGREDDMIIS-G 425 (516)
T ss_pred EEEEEC-CCCCCCCCC---CceEEEEecCcccccccCCch---hhe-ecCceecceeEEEcCCccEEEeccccceEEE-C
Confidence 999999 555655555 489999999999999998764 223 5899999999999999999999999999997 8
Q ss_pred eeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcchhHHH
Q 005991 553 GEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSHVIFIA 623 (666)
Q Consensus 553 G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~ 623 (666)
|++|+|.+||++|.+||.|.+++|++.++. +.++++|+++ .++++++++++ ++ .+++|..+.+++
T Consensus 426 G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~-----~~~~p~~i~~v~ 499 (516)
T PRK13383 426 GENVYPRAVENALAAHPAVADNAVIGVPDERFGHRLAAFVVLHPGSGVDAAQLRDYLKDR-VS-----RFEQPRDINIVS 499 (516)
T ss_pred CEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHHh-cc-----cCCCCcEEEEeC
Confidence 999999999999999999999999996643 5788888863 46889999988 87 899999999995
Q ss_pred -HHHHHhhhhhhhhhc
Q 005991 624 -LIHNLCQLYSSKELF 638 (666)
Q Consensus 624 -~~~~~~gK~~r~~l~ 638 (666)
+|++.+||++|++|+
T Consensus 500 ~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 500 SIPRNPTGKVLRKELP 515 (516)
T ss_pred CCCCCCCCcCcHHHhC
Confidence 777778999999874
No 96
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.6e-62 Score=548.97 Aligned_cols=498 Identities=23% Similarity=0.329 Sum_probs=396.3
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
.++.++|...++.+||++|+.+. + +.+||.||.+++.++|.+|.++|+++|++|+++++|+++|+++++||
T Consensus 33 ~~l~~~l~~~a~~~p~~~al~~~---~------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~ 103 (567)
T PRK06178 33 RPLTEYLRAWARERPQRPAIIFY---G------HVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGI 103 (567)
T ss_pred ccHHHHHHHHHHHCCCceEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHH
Confidence 68999999999999999999764 3 35999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCC--CCCC--CCC---CCCc
Q 005991 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDE--HLPS--LPS---TSGV 231 (666)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~--~~~~--~~~---~~~~ 231 (666)
+++|++++|++|.++.+++.+++++++++++++++...+.+.+..... .++.++..+..+. .... ... ....
T Consensus 104 ~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (567)
T PRK06178 104 LKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAET-SLRHVIVTSLADVLPAEPTLPLPDSLRAPRL 182 (567)
T ss_pred HHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccC-CcceEEEeccccccccccccccccccccccc
Confidence 999999999999999999999999999999999988877776655443 3444444332110 0000 000 0000
Q ss_pred EEEehHHHHhcCCC--CCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccc-ccccCCCcEEEEcCChHH
Q 005991 232 KLISYLQLQSQGCS--SPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL-MVQFYPSDIYMSYLPLAH 308 (666)
Q Consensus 232 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~-~~~~~~~d~~l~~~pl~h 308 (666)
....+.++...... .........++++++|+|||||||.||||++||++++..+..... ...+..+|++++++|++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~ 262 (567)
T PRK06178 183 AAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPEFW 262 (567)
T ss_pred cccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecchHH
Confidence 00112222221111 111123356799999999999999999999999998876554432 256788999999999999
Q ss_pred HHHHHH-HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH
Q 005991 309 IYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQA 386 (666)
Q Consensus 309 ~~~~~~-~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~ 386 (666)
.+++.. ++.+++.|+++++.+ .++..++..++++++|.+.++|..+..+..... .
T Consensus 263 ~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~--~--------------------- 319 (567)
T PRK06178 263 IAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPR--F--------------------- 319 (567)
T ss_pred HHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCC--C---------------------
Confidence 999865 677899999999988 799999999999999999999998877654200 0
Q ss_pred HHcCCCCChhhhHHhhHHHHHHhCCceEEEE--ecCCCCcHHHHHHHHHHhCCcccc-CcccchhhhhhhccCC---C--
Q 005991 387 IVSGQTPSKMWDRLVFNKIRERLGGRVRFMG--SGASPLSPDVMDFLKVCFGCQVME-GYGMTETSCIISAIDK---G-- 458 (666)
Q Consensus 387 ~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~--~gG~~l~~~~~~~~~~~~~~~v~~-~YG~TE~~~~~~~~~~---~-- 458 (666)
....+ .+++.+. ++++++++++.+.|++.+|..++. .||+||++..++.... .
T Consensus 320 -----------~~~~l--------~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~ 380 (567)
T PRK06178 320 -----------AEYDL--------SSLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDF 380 (567)
T ss_pred -----------CCCCc--------chheeeeeccccccCCHHHHHHHHHHhCCcccccccccccccccceeccccccCcc
Confidence 00000 2455543 456999999999999988877775 7999998765443221 1
Q ss_pred --CCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCC
Q 005991 459 --DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGG 536 (666)
Q Consensus 459 --~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG 536 (666)
...++++|+|+||++++|+|+++++.++.++ .|||+++|++++.|||++++.+++.| .+|||+|||+|++++||
T Consensus 381 ~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g~---~Gel~v~g~~v~~gY~~~~~~~~~~~-~dg~~~TGDl~~~~~~g 456 (567)
T PRK06178 381 DLLSQPVFVGLPVPGTEFKICDFETGELLPLGA---EGEIVVRTPSLLKGYWNKPEATAEAL-RDGWLHTGDIGKIDEQG 456 (567)
T ss_pred ccccCCcccccccCCcEEEEEcCCCCCcCCCCC---ceEEEEECCcccccccCChhhhhhcc-cCCceeecceEEEecCC
Confidence 1345679999999999999977777777665 89999999999999999999999988 68999999999999999
Q ss_pred cEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc------ChhHHHHHHHHcCCCc
Q 005991 537 RLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV------DPDVLKDWAASQGIKV 607 (666)
Q Consensus 537 ~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~------~~~~l~~~~~~~~l~~ 607 (666)
+++|+||++|+||+ +|++|+|.+||+++.++|+|.+++|++.+++ +.++++|++ ++++++++++++ ++
T Consensus 457 ~l~i~GR~~d~i~~-~G~~i~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~- 533 (567)
T PRK06178 457 FLHYLGRRKEMLKV-NGMSVFPSEVEALLGQHPAVLGSAVVGRPDPDKGQVPVAFVQLKPGADLTAAALQAWCREN-MA- 533 (567)
T ss_pred eEEEEecccccEEE-CCEEECHHHHHHHHHhCCCeeEEEEEcCcCcccCcceEEEEEeCCCCcCCHHHHHHHHHhc-Cc-
Confidence 99999999999997 8999999999999999999999999987643 578888886 356889999988 88
Q ss_pred ccccccccCcchhHH-HHHHHHhhhhhhhhhccc
Q 005991 608 IYCFSFRANSHVIFI-ALIHNLCQLYSSKELFRS 640 (666)
Q Consensus 608 ~~~~~~~~p~~i~~v-~~~~~~~gK~~r~~l~~~ 640 (666)
.+++|. +.++ ++|++.+||++|++|++.
T Consensus 534 ----~~~~p~-i~~v~~iP~t~~GKv~r~~l~~~ 562 (567)
T PRK06178 534 ----VYKVPE-IRIVDALPMTATGKVRKQDLQAL 562 (567)
T ss_pred ----ccCCce-EEEeccCCCCCccceeHHHHHHH
Confidence 899997 6666 488888899999999865
No 97
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=8e-63 Score=545.45 Aligned_cols=471 Identities=18% Similarity=0.217 Sum_probs=387.2
Q ss_pred CHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHH
Q 005991 80 TLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACS 159 (666)
Q Consensus 80 tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~ 159 (666)
++.+.|.+.++.+|+++|+... + +.+||+||.+++.++|..|.+.|+++|++|+++++|+.+|+++++||+
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~---~------~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~ 71 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQ---G------QELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSI 71 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcC---C------cEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHH
Confidence 4788999999999999999653 2 359999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHH
Q 005991 160 AYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQL 239 (666)
Q Consensus 160 ~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (666)
++|++++|+++.++.+++.++++.++++.++++........ ... ++.++. ...+
T Consensus 72 ~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-------~~~-~~~~~~------------------~~~~ 125 (502)
T TIGR01734 72 KSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAV-------GTQ-IITLSA------------------LEQA 125 (502)
T ss_pred HhCCEEeCCCCcChHHHHHHHHHhcCCCEEEeccccccccc-------CCc-eEEchH------------------hhhh
Confidence 99999999999999999999999999999999875432211 111 111110 1111
Q ss_pred HhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHH
Q 005991 240 QSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSV 319 (666)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l 319 (666)
...... ........+++.++++|||||||.||||+++|+++.+.+.+....+++..++++++.+|++|.+++...+.++
T Consensus 126 ~~~~~~-~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l 204 (502)
T TIGR01734 126 ETSGGP-VSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCL 204 (502)
T ss_pred hhhcCC-ccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHH
Confidence 111111 1111234678999999999999999999999999998888777778888999999999999999998888999
Q ss_pred HhCcEEEEec----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCCh
Q 005991 320 YYGVAVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSK 395 (666)
Q Consensus 320 ~~G~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~ 395 (666)
..|+++++.+ .++..+++.++++++|.+.++|.++..++.....
T Consensus 205 ~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~-------------------------------- 252 (502)
T TIGR01734 205 ASGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNF-------------------------------- 252 (502)
T ss_pred HCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhcccc--------------------------------
Confidence 9999999876 4889999999999999999999998765432000
Q ss_pred hhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCC-----CCCCCCCccCCc
Q 005991 396 MWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDK-----GDNLSGHVGSPN 469 (666)
Q Consensus 396 ~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~-----~~~~~~~vG~p~ 469 (666)
.....++++.+++||+++++++.+.+.+.+ ++.+++.||+||++..++.... ......++|.|.
T Consensus 253 ----------~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~ 322 (502)
T TIGR01734 253 ----------NQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFAK 322 (502)
T ss_pred ----------ccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEccccccccCCcccccccc
Confidence 000014799999999999999999988877 7899999999998754443221 123345799999
Q ss_pred cCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhcc---CCCCeeecccEEEEecCCcEEEEccCCC
Q 005991 470 PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVI---DGDGWLHTGDIGLWLPGGRLKIIDRKKN 546 (666)
Q Consensus 470 ~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~---~~~gw~~TGDlg~~~~dG~l~i~GR~~d 546 (666)
++++++|+| +++..++.++ .|||+++|+.++.||+++++.|.+.| ++++||+|||+|++|++ +|+++||.+|
T Consensus 323 ~~~~~~i~~-~~~~~~~~g~---~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d 397 (502)
T TIGR01734 323 PDMNLFIMD-EEGEPLPEGE---KGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDF 397 (502)
T ss_pred CCCEEEEEC-CCCCCCCCCC---eeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccC
Confidence 999999999 4455555554 89999999999999999999998876 34469999999999976 9999999999
Q ss_pred eEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeC--C--CCeEEEEEEcCh----------hHHHHHHHHcCCCcccccc
Q 005991 547 IFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDS--F--NSCLVAIVAVDP----------DVLKDWAASQGIKVIYCFS 612 (666)
Q Consensus 547 ~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~--~--~~~~va~vv~~~----------~~l~~~~~~~~l~~~~~~~ 612 (666)
+||+ +|++|+|++||+.+.++|.|.+|+|++.. + .+.++++|+++. .+++++++++ ++ .
T Consensus 398 ~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~-l~-----~ 470 (502)
T TIGR01734 398 QIKL-HGYRIELEDIEFNLRQSSYIESAVVVPKYNKDHKVEYLIAAIVPETEDFEKEFQLTKAIKKELKKS-LP-----A 470 (502)
T ss_pred eEEE-CcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCCCceEEEEEEEecccccccchhhHHHHHHHHhhh-Ch-----h
Confidence 9997 89999999999999999999999999843 2 257889998753 4567788877 77 8
Q ss_pred cccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 613 FRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 613 ~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
+++|+.+++++ +|++.+||++|++|++.
T Consensus 471 ~~~P~~~~~v~~lP~t~~gKv~r~~l~~~ 499 (502)
T TIGR01734 471 YMIPRKFIYRDQLPLTANGKIDRKALAEE 499 (502)
T ss_pred hcCCcEEEEccccCCCCCCcccHHHHHHh
Confidence 99999999995 88888899999999874
No 98
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-62 Score=542.95 Aligned_cols=474 Identities=19% Similarity=0.179 Sum_probs=375.3
Q ss_pred HHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEE
Q 005991 87 YAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISV 166 (666)
Q Consensus 87 ~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v 166 (666)
.+++++|+++|+.+. +. .+.+||+||.++++++|++|.++|+++||+|+++++|+++|+++++||+++|++++
T Consensus 5 ~~a~~~p~~~a~~~~---~~----~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~ 77 (501)
T PRK13390 5 THAQIAPDRPAVIVA---ET----GEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYIT 77 (501)
T ss_pred hhhhhCCCCcEEEec---CC----CeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEe
Confidence 457789999999753 21 24699999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCCCC
Q 005991 167 PLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSS 246 (666)
Q Consensus 167 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (666)
|+++.++++++.++++++++++++++............. ....+.+..... ...++++......
T Consensus 78 ~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~-----------~~~~~~~~~~~~~-- 141 (501)
T PRK13390 78 AINHHLTAPEADYIVGDSGARVLVASAALDGLAAKVGAD---LPLRLSFGGEID-----------GFGSFEAALAGAG-- 141 (501)
T ss_pred ccccCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhc---cceEEEecCccc-----------ccccHHHHhcccC--
Confidence 999999999999999999999999987543332222111 112222221100 1123333322110
Q ss_pred CCCCCCCCCCCcEEEEeccCCCCCccEEEe--cHHHHHHHH----hhcccccccCCCcEEEEcCChHHHHHHHHHHHHHH
Q 005991 247 PQPFCPPKPEDIATICYTSGTTGTPKGAVL--THGNLISNV----AGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVY 320 (666)
Q Consensus 247 ~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~--th~~l~~~~----~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~ 320 (666)
+. ....++.++|+|||||||.||||++ +|.++.... ......+.+..+|++++.+|++|.+++...+..+.
T Consensus 142 --~~-~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~ 218 (501)
T PRK13390 142 --PR-LTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSMVHA 218 (501)
T ss_pred --CC-CCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHHHHh
Confidence 10 1122357999999999999999995 556554321 11123466788999999999999998876555677
Q ss_pred hCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhH
Q 005991 321 YGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDR 399 (666)
Q Consensus 321 ~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~ 399 (666)
.|+++++.+ .++..+++.|+++++|++.++|+++..+.........
T Consensus 219 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~--------------------------------- 265 (501)
T PRK13390 219 LGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRT--------------------------------- 265 (501)
T ss_pred cCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcc---------------------------------
Confidence 899998877 7899999999999999999999999887642100000
Q ss_pred HhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC-CCCCCCccCCccCcEEEEEe
Q 005991 400 LVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPACEIKLVD 478 (666)
Q Consensus 400 ~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~~v~ivd 478 (666)
.....++|.+++||+++++++.+.+++.++.++++.||+||+++++...... ....+++|+|+++ +++|+|
T Consensus 266 -------~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g-~~~i~d 337 (501)
T PRK13390 266 -------RYDVSSLRAVIHAAAPCPVDVKHAMIDWLGPIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSVLG-DLHICD 337 (501)
T ss_pred -------cCChhhhheEEEcCCCCCHHHHHHHHHhcCCceeeeecccccCceEEecchhhccCCCCcCCcccc-eEEEEC
Confidence 0000378999999999999999999998899999999999998654432221 2356789999999 799999
Q ss_pred cCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCC--CCeeecccEEEEecCCcEEEEccCCCeEEcCCeeee
Q 005991 479 VPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDG--DGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYV 556 (666)
Q Consensus 479 ~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~--~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v 556 (666)
++++.++.|+ .|||+|+|++++.||+++|+.|++.|.. ++|++|||+|++|+||++++.||.||+||+ +|++|
T Consensus 338 -~~~~~~~~g~---~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~-~G~~v 412 (501)
T PRK13390 338 -DDGNELPAGR---IGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIIS-GGVNI 412 (501)
T ss_pred -CCCCCCCCCC---ceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeE-CCeee
Confidence 5666666555 8999999999999999999999998743 689999999999999999999999999997 89999
Q ss_pred ccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh---------hHHHHHHHHcCCCcccccccccCcchhHHH-
Q 005991 557 APEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP---------DVLKDWAASQGIKVIYCFSFRANSHVIFIA- 623 (666)
Q Consensus 557 ~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~---------~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~- 623 (666)
+|.+||+++.+||+|.+++|++.++. +.++++|++.+ +++.++++++ ++ .|++|..+++++
T Consensus 413 ~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~~~~~v~~~~~~~~~~~~~~~l~~~~~~~-l~-----~~~~P~~~~~~~~ 486 (501)
T PRK13390 413 YPQETENALTMHPAVHDVAVIGVPDPEMGEQVKAVIQLVEGIRGSDELARELIDYTRSR-IA-----HYKAPRSVEFVDE 486 (501)
T ss_pred CHHHHHHHHHhCCCeeEEEEEeccCcccCceeEEEEEecCCCCcchhhHHHHHHHHHHh-cc-----cCCCCcEEEEecc
Confidence 99999999999999999999997754 57888887531 4678889888 88 999999999995
Q ss_pred HHHHHhhhhhhhhhc
Q 005991 624 LIHNLCQLYSSKELF 638 (666)
Q Consensus 624 ~~~~~~gK~~r~~l~ 638 (666)
+|++.+||++|++|+
T Consensus 487 iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 487 LPRTPTGKLVKGLLR 501 (501)
T ss_pred CCCCCccceehhhcC
Confidence 778888999999985
No 99
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=2.8e-62 Score=590.92 Aligned_cols=493 Identities=21% Similarity=0.228 Sum_probs=393.3
Q ss_pred CCCCCHHHHHHHHHHhCCC-CceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHH
Q 005991 76 PEIGTLHDNFIYAVENYPD-YKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIV 154 (666)
Q Consensus 76 ~~~~tl~~~~~~~a~~~pd-~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~ 154 (666)
+...++.+.|.++++++|+ +.++.+. + .+.+||+||+++++++|+.|++ |+++||+|+++++|+++++++
T Consensus 628 ~~~~~~~~~l~~~~~~~~~~~~ai~~~---~-----~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~ 698 (1140)
T PRK06814 628 DYDRTLFEALIEAAKIHGFKKLAVEDP---V-----NGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVT 698 (1140)
T ss_pred cccCCHHHHHHHHHHHcCCCCeEeECC---C-----CCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHH
Confidence 3457889999999999874 5665421 1 2459999999999999999975 999999999999999999999
Q ss_pred HHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHH--HHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcE
Q 005991 155 DHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTL--LSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVK 232 (666)
Q Consensus 155 ~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~--~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~ 232 (666)
++||+++|++++|+|++++++++.+++++++++++|+++...+.. .+....++....++.+++...... .
T Consensus 699 ~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~ 770 (1140)
T PRK06814 699 FFALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIG--------L 770 (1140)
T ss_pred HHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCC--------h
Confidence 999999999999999999999999999999999999987654322 112222333334444443211000 0
Q ss_pred EEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHH
Q 005991 233 LISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYER 312 (666)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~ 312 (666)
...+.+....... ..+.....++|+++|+|||||||.||||++||+++.+.+......++++++|++++.+|++|.+++
T Consensus 771 ~~~~~~~~~~~~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 849 (1140)
T PRK06814 771 ADKIKGLLAGRFP-LVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGL 849 (1140)
T ss_pred HHHHHHHhhccCC-ccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHH
Confidence 0001111111111 011113578999999999999999999999999999888877777888999999999999999998
Q ss_pred HH-HHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHc
Q 005991 313 AN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVS 389 (666)
Q Consensus 313 ~~-~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~ 389 (666)
.. .+.++..|+++++.+ .+...+.+.++++++|++.++|+++..+.+... .
T Consensus 850 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~-----~--------------------- 903 (1140)
T PRK06814 850 TGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAH-----P--------------------- 903 (1140)
T ss_pred HHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcc-----c---------------------
Confidence 54 677899999999876 467788899999999999999999887754200 0
Q ss_pred CCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCc
Q 005991 390 GQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPN 469 (666)
Q Consensus 390 ~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~ 469 (666)
. ..+++|.+++||+++++++.+.+.+.+++++++.||+||++..++...+.....+++|+|.
T Consensus 904 -------~-----------~~~~lr~v~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~ 965 (1140)
T PRK06814 904 -------Y-----------DFRSLRYVFAGAEKVKEETRQTWMEKFGIRILEGYGVTETAPVIALNTPMHNKAGTVGRLL 965 (1140)
T ss_pred -------c-----------cccceeEEEEcCCcCCHHHHHHHHHHhCCcEEeccccccccceEEecCCCCCCCCcCCccC
Confidence 0 0148999999999999999999999899999999999999876665544455678999999
Q ss_pred cCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEE
Q 005991 470 PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (666)
Q Consensus 470 ~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ik 549 (666)
|++++++.+.++ .+ +.|||+++|++++.||+++++.+......+|||+|||+|++|+||+++++||.||+||
T Consensus 966 ~g~~~~~~~~~~-----~~---~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~ 1037 (1140)
T PRK06814 966 PGIEYRLEPVPG-----ID---EGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAK 1037 (1140)
T ss_pred CCCeEEEeecCC-----CC---CceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCeee
Confidence 999999987432 12 4799999999999999998754432223689999999999999999999999999999
Q ss_pred cCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc---ChhHHHHHHHHcCCCcccccccccCcchhHHH
Q 005991 550 LAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV---DPDVLKDWAASQGIKVIYCFSFRANSHVIFIA 623 (666)
Q Consensus 550 l~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~---~~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~ 623 (666)
+ +|++|+|.|||+++.+|+.|.+++|++.+++ +.+++++.. +.+++.++++++.++ .+++|..+.+++
T Consensus 1038 ~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~l~-----~~~~P~~i~~v~ 1111 (1140)
T PRK06814 1038 I-AGEMISLAAVEELAAELWPDALHAAVSIPDARKGERIILLTTASDATRAAFLAHAKAAGAS-----ELMVPAEIITID 1111 (1140)
T ss_pred e-CCEEECHHHHHHHHHhcCCcccEEEEEcccCCCCceEEEEEcCCCcCHHHHHHHHHHcCCC-----cccCCcEEEEec
Confidence 7 8999999999999999999999999987654 466766653 457888999876587 999999999996
Q ss_pred -HHHHHhhhhhhhhhccchhhh
Q 005991 624 -LIHNLCQLYSSKELFRSRCCY 644 (666)
Q Consensus 624 -~~~~~~gK~~r~~l~~~~~~~ 644 (666)
+|++.+||++|++|++.....
T Consensus 1112 ~lP~t~~GKi~r~~L~~~~~~~ 1133 (1140)
T PRK06814 1112 EIPLLGTGKIDYVAVTKLAEEA 1133 (1140)
T ss_pred CcCCCCCCCCcHHHHHHHHHHh
Confidence 888888999999999875543
No 100
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-61 Score=539.58 Aligned_cols=497 Identities=21% Similarity=0.266 Sum_probs=391.0
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
.++.+.|++.++.+|+++|+.+. + ..+||+||.+++.++|.+|.+.|+++||+|+++++|+++++++++||
T Consensus 18 ~~~~~~~~~~~~~~~~~~a~~~~---~------~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~ 88 (545)
T PRK08162 18 LTPLSFLERAAEVYPDRPAVIHG---D------RRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGV 88 (545)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEC---C------eEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHH
Confidence 57889999999999999999653 2 35999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHH
Q 005991 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQ 238 (666)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (666)
+++|++++|+++.++.+++.+++++++++.++++....+.+.+.....+..+.++ ++...... .....+...++.+
T Consensus 89 ~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~ 164 (545)
T PRK08162 89 PMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLV-IDVDDPEY---PGGRFIGALDYEA 164 (545)
T ss_pred HHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEE-EecCcccc---ccCCCcccccHHH
Confidence 9999999999999999999999999999999999888777665544444332222 22111110 0011123345666
Q ss_pred HHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHH
Q 005991 239 LQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVS 318 (666)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~ 318 (666)
+............+.+.+++++|+|||||||.||||+++|+++...+......+.+..++++++.+|++|.+++...+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~~~~~ 244 (545)
T PRK08162 165 FLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCFPWTV 244 (545)
T ss_pred HhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHHHHHH
Confidence 65443221111122345689999999999999999999999987666555555677888999999999999998775544
Q ss_pred HHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhh
Q 005991 319 VYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMW 397 (666)
Q Consensus 319 l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~ 397 (666)
.+.|++.++.. .++..+++.++++++|++.++|+++..|.+.....
T Consensus 245 ~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~--------------------------------- 291 (545)
T PRK08162 245 AARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEW--------------------------------- 291 (545)
T ss_pred HHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCcccc---------------------------------
Confidence 44455544444 89999999999999999999999999886521000
Q ss_pred hHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC-----------CCCCCCcc
Q 005991 398 DRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-----------DNLSGHVG 466 (666)
Q Consensus 398 d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~-----------~~~~~~vG 466 (666)
+..+ .+.+.+++||+++++++.++++. +++++++.||+||+++.++..... ....+++|
T Consensus 292 --------~~~~-~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 361 (545)
T PRK08162 292 --------RAGI-DHPVHAMVAGAAPPAAVIAKMEE-IGFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQG 361 (545)
T ss_pred --------ccCC-ccceEEEECCCCCCHHHHHHHHH-hCCceeecccccccCcceeecccccccccCCccchhhccCCCC
Confidence 0000 14556678999999999999887 589999999999986544432111 01234567
Q ss_pred CCccC-cEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCC
Q 005991 467 SPNPA-CEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKK 545 (666)
Q Consensus 467 ~p~~~-~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~ 545 (666)
.+.+. .+++|+|++++..++.+. +..|||+|+|+.++.||+++++.|.+.| .+|||+|||+|++|+||.++|+||.|
T Consensus 362 ~~~~~~~~~~i~d~~~~~~~~~~g-~~~Gel~v~g~~~~~gY~~~~~~~~~~~-~~g~~~TGDl~~~d~dg~l~~~GR~~ 439 (545)
T PRK08162 362 VRYPLQEGVTVLDPDTMQPVPADG-ETIGEIMFRGNIVMKGYLKNPKATEEAF-AGGWFHTGDLAVLHPDGYIKIKDRSK 439 (545)
T ss_pred cccCCcceEEEEcCCCCcccCCCC-CceeEEEEecCcchhhhcCChhhhHHHh-hCCCcccCceEEEcCCccEEEEeccc
Confidence 77653 468888865665554421 0269999999999999999999999999 68999999999999999999999999
Q ss_pred CeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccC
Q 005991 546 NIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRAN 616 (666)
Q Consensus 546 d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p 616 (666)
|+||+ +|++|+|.+||++|.+||+|.+|+|++.++. +.++++|++. .++++++++++ ++ .+++|
T Consensus 440 ~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~-----~~~~P 512 (545)
T PRK08162 440 DIIIS-GGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEVPCAFVELKDGASATEEEIIAHCREH-LA-----GFKVP 512 (545)
T ss_pred ceEEe-CCEEECHHHHHHHHHhCCcccEEEEEeeeccccCceEEEEEEeCCCCCCCHHHHHHHHHHh-cc-----cccCC
Confidence 99996 8999999999999999999999999987643 5788888753 46788999988 88 99999
Q ss_pred cchhHHHHHHHHhhhhhhhhhccc
Q 005991 617 SHVIFIALIHNLCQLYSSKELFRS 640 (666)
Q Consensus 617 ~~i~~v~~~~~~~gK~~r~~l~~~ 640 (666)
..+.+.++|.+.+||++|+.|++.
T Consensus 513 ~~~~~~~iP~t~~gK~~r~~l~~~ 536 (545)
T PRK08162 513 KAVVFGELPKTSTGKIQKFVLREQ 536 (545)
T ss_pred cEEEecccCCCCCcCCcHHHHHHH
Confidence 999877899999999999999765
No 101
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=1.3e-62 Score=533.02 Aligned_cols=412 Identities=19% Similarity=0.186 Sum_probs=343.5
Q ss_pred EeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 005991 114 MTYGEVSAARKEIGSGLLFHGL-QKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCI 192 (666)
Q Consensus 114 ~Ty~el~~~~~~lA~~L~~~gv-~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 192 (666)
+.|+||.++++++|++|.+.|+ ++|++|+++++|+++++++++||+++|++++|+++.++.+++.++++++++++++++
T Consensus 20 ~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~~ 99 (452)
T PRK07445 20 YNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWGL 99 (452)
T ss_pred cChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEec
Confidence 6899999999999999999998 579999999999999999999999999999999999999999999999999999987
Q ss_pred cccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCcc
Q 005991 193 PQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPK 272 (666)
Q Consensus 193 ~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK 272 (666)
.+..... .... . .......++++++++|||||||.||
T Consensus 100 ~~~~~~~---------------~~~~--------------------------~--~~~~~~~~~~~~~i~~TSGTTG~PK 136 (452)
T PRK07445 100 DQLKLSH---------------PPPL--------------------------P--SQGILPNLETGWIMIPTGGSSGQIR 136 (452)
T ss_pred Ccccccc---------------CCCC--------------------------C--ccccCCCCCCcEEEEeCCCCCCCCc
Confidence 6432100 0000 0 0001235689999999999999999
Q ss_pred EEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEecC-CHHHHHHHHHhhcCeEEeech
Q 005991 273 GAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQG-DNLKLMDDLAVLKPTIFPSVP 351 (666)
Q Consensus 273 gV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P 351 (666)
||++||+++.+.+......+++.+ ++.++++|++|.+|+...+.+++.|+++++.+. +..........+++|++.++|
T Consensus 137 gV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP 215 (452)
T PRK07445 137 FAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVP 215 (452)
T ss_pred EEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehH
Confidence 999999999888877666666654 467889999999999888889999999998762 222223344578899999999
Q ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHH
Q 005991 352 RLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFL 431 (666)
Q Consensus 352 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~ 431 (666)
+++..+.+.... ..+++|.+++||+++++++.+.+
T Consensus 216 ~~l~~l~~~~~~---------------------------------------------~l~~l~~i~~gG~~l~~~~~~~~ 250 (452)
T PRK07445 216 TQLQRLLQLRPQ---------------------------------------------WLAQFRTILLGGAPAWPSLLEQA 250 (452)
T ss_pred HHHHHHHhhChh---------------------------------------------hhhcceEEEECCccCCHHHHHHH
Confidence 999887641000 00389999999999999999988
Q ss_pred HHHhCCccccCcccchhhhhhhccCCCC--CCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccC
Q 005991 432 KVCFGCQVMEGYGMTETSCIISAIDKGD--NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYK 509 (666)
Q Consensus 432 ~~~~~~~v~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~ 509 (666)
+. +++++++.||+||++..++...+.+ ...+++|+|+|+++++|++ + ..|||+|+|++++.||++
T Consensus 251 ~~-~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~~---------g---~~Gel~v~g~~~~~gY~~ 317 (452)
T PRK07445 251 RQ-LQLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIPA---------N---QTGNITIQAQSLALGYYP 317 (452)
T ss_pred Hh-cCCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEcC---------C---CcceEEEeCCccchhhcC
Confidence 76 5899999999999976554433322 2457899999999999971 2 379999999999999998
Q ss_pred ChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEE
Q 005991 510 NEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLV 586 (666)
Q Consensus 510 ~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~v 586 (666)
++. +.+|||+|||+|++|+||+|+|+||+||+||+ +|++|+|.|||++|.+||+|.+|+|+|.++. +.++
T Consensus 318 ~~~------~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~-~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~ 390 (452)
T PRK07445 318 QIL------DSQGIFETDDLGYLDAQGYLHILGRNSQKIIT-GGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVT 390 (452)
T ss_pred Ccc------CCCCEEECCCEEEEcCCCCEEEEeecCCEEEE-CCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEE
Confidence 643 35799999999999999999999999999996 8999999999999999999999999998754 5788
Q ss_pred EEEEcC-----hhHHHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 587 AIVAVD-----PDVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 587 a~vv~~-----~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
|+|++. .++++++++++ ++ .|++|+.+.+++ +|++.+||++|++|++.
T Consensus 391 a~vv~~~~~~~~~~l~~~~~~~-L~-----~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 444 (452)
T PRK07445 391 AIYVPKDPSISLEELKTAIKDQ-LS-----PFKQPKHWIPVPQLPRNPQGKINRQQLQQI 444 (452)
T ss_pred EEEEeCCCCCCHHHHHHHHHHh-CC-----cccCCeEEEEecCCCCCCCcccCHHHHHHH
Confidence 998863 46899999998 88 999999999995 88888899999999875
No 102
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.7e-62 Score=545.72 Aligned_cols=495 Identities=23% Similarity=0.340 Sum_probs=385.7
Q ss_pred CCCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHH
Q 005991 75 HPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIV 154 (666)
Q Consensus 75 ~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~ 154 (666)
.++..++.++|...++++|+..++ +.+...++.+||.||+.++.++|++|.++|+++||+|+++++|+++|+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~ 90 (579)
T PRK09192 17 YADFPTLVEALDYAALGEAGMNFY------DRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEA 90 (579)
T ss_pred ccchhhHHHHHHHhhccCCceEEE------ecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHH
Confidence 356789999999999998876554 22222357799999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEecCCCCC-------HHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCC
Q 005991 155 DHACSAYSYISVPLYDTLG-------PDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPS 227 (666)
Q Consensus 155 ~lA~~~~G~~~vpl~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~ 227 (666)
++||+++|++++|+++..+ .+++.++++.++++++|++....+.+.+.....+ .+.
T Consensus 91 ~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~---~~~-------------- 153 (579)
T PRK09192 91 FFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNP---LLH-------------- 153 (579)
T ss_pred HHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhcccc---ccc--------------
Confidence 9999999999999987543 6899999999999999999876665554322211 111
Q ss_pred CCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccc-ccccCCCcEEEEcCCh
Q 005991 228 TSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL-MVQFYPSDIYMSYLPL 306 (666)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~-~~~~~~~d~~l~~~pl 306 (666)
+.++.++...... ........++++++|+|||||||.||||+++|+++++.+..... .+++.++|++++++|+
T Consensus 154 -----~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~ 227 (579)
T PRK09192 154 -----VLSHAWFKALPEA-DVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPF 227 (579)
T ss_pred -----eeehhhhcccCCC-ccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCC
Confidence 1223333222111 11222346789999999999999999999999999988877776 6888999999999999
Q ss_pred HHHHHHHH-HHHHHHhCcEEEEec-----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Q 005991 307 AHIYERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAY 380 (666)
Q Consensus 307 ~h~~~~~~-~~~~l~~G~~~~~~~-----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 380 (666)
+|.+++.. ++.++..|+++++.+ .++..+++.+.++++|+++..|..+..+.......
T Consensus 228 ~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~---------------- 291 (579)
T PRK09192 228 YHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSK---------------- 291 (579)
T ss_pred CCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccc----------------
Confidence 99999886 456788899987765 37889999999999998776555444332211000
Q ss_pred HHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhC------CccccCcccchhhhhhhc
Q 005991 381 NSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG------CQVMEGYGMTETSCIISA 454 (666)
Q Consensus 381 ~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~------~~v~~~YG~TE~~~~~~~ 454 (666)
.. ....+ +++|.+++||+++++++.+.+.+.++ ..+++.||+||+++.++.
T Consensus 292 --------------~~-~~~~l--------~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~ 348 (579)
T PRK09192 292 --------------DL-AELDL--------SCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSF 348 (579)
T ss_pred --------------cc-cccch--------hhhheeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEec
Confidence 00 00001 47999999999999999999888763 348999999999865554
Q ss_pred cCCCC----------------------------CCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCcc
Q 005991 455 IDKGD----------------------------NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQG 506 (666)
Q Consensus 455 ~~~~~----------------------------~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~G 506 (666)
..... ...+++|.|+|+++++|+| +++..++.+. .|||+++|+++++|
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d-~~~~~~~~g~---~Gel~i~g~~~~~g 424 (579)
T PRK09192 349 SPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRN-EAGMPLPERV---VGHICVRGPSLMSG 424 (579)
T ss_pred cCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEEC-CCCCCCCCCC---EEEEEecCCchhhh
Confidence 32211 0125799999999999999 5556666554 89999999999999
Q ss_pred ccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcc--eEEEEEeCCC--
Q 005991 507 YYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVL--QCFIYGDSFN-- 582 (666)
Q Consensus 507 Y~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~--~~~V~g~~~~-- 582 (666)
||++ +.+.+.+..+|||+|||+|++ ++|+++|+||+||+||+ +|++|+|.|||++|.+||+|. +|+|++.+++
T Consensus 425 Y~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~-~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~~ 501 (579)
T PRK09192 425 YFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLIII-NGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQENG 501 (579)
T ss_pred hcCC-ccccccccCCceeeccceeeE-ECCEEEEEeccccEEEE-CCCccCHHHHHHHHHhcCCccCCcEEEEEeccCCC
Confidence 9999 778888888999999999999 99999999999999997 899999999999999999998 8999886643
Q ss_pred CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcchhHH---HHHHHHhhhhhhhhhccchhhhhcCCCccc
Q 005991 583 SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSHVIFI---ALIHNLCQLYSSKELFRSRCCYRTGRDSSV 652 (666)
Q Consensus 583 ~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v---~~~~~~~gK~~r~~l~~~~~~~~~~~~~~~ 652 (666)
+.++++|++. .+++.++++++ +. ..+++|..+.++ ++|++.+||++|++|++ .|.+|....+
T Consensus 502 ~~~~~~v~~~~~~~~~~~~l~~~~~~~-l~----~~~~~~~~i~~~~~~~lP~t~~GKv~R~~l~~---~~~~~~~~~~ 572 (579)
T PRK09192 502 EKIVLLVQCRISDEERRGQLIHALAAL-VR----SEFGVEAAVELVPPHSLPRTSSGKLSRAKAKK---RYLSGAFASL 572 (579)
T ss_pred eeEEEEEEecCCChHHHHHHHHHHHHH-HH----HHhCCCceEEEeCCCCcCCCCCcchhHHHHHH---HHHcCCCCcc
Confidence 4677887752 25677888776 42 257788877777 48899999999999854 5555555444
No 103
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.2e-61 Score=536.95 Aligned_cols=499 Identities=26% Similarity=0.327 Sum_probs=394.6
Q ss_pred CCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 78 ~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~-~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
..++.++|...++++|+++|+... + +.+||.||.++++++|.+|.+ .|+++|++|+++++|+++|+++++
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~~---~------~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~l 92 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFINM---G------EVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALF 92 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEEC---C------ccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 468999999999999999999753 2 359999999999999999984 899999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCC--CC----------
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHL--PS---------- 224 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~--~~---------- 224 (666)
||+++|++++|+++.++.+++.+++++++++.++++....+.+.+..... ..+.++......... ..
T Consensus 93 A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (560)
T PRK08974 93 GILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKT-PVKHVILTRMGDQLSTAKGTLVNFVVKYI 171 (560)
T ss_pred HHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhc-CcceEEEecccccccccccccccchhhhc
Confidence 99999999999999999999999999999999999876655554443222 233333221110000 00
Q ss_pred --C-CCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccccc---ccCCCc
Q 005991 225 --L-PSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMV---QFYPSD 298 (666)
Q Consensus 225 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~---~~~~~d 298 (666)
. .........++.+....+...........++++++|+|||||||.||||.++|+++...+......+ ....++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~ 251 (560)
T PRK08974 172 KRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKE 251 (560)
T ss_pred ccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCcc
Confidence 0 0000001122333333222211122234678999999999999999999999999987665433222 124467
Q ss_pred EEEEcCChHHHHHHHH-HHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHH
Q 005991 299 IYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKL 375 (666)
Q Consensus 299 ~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l 375 (666)
.++..+|++|.+++.. .+.++..|+++++.. .++..+++.++++++|.+.++|+++..+......
T Consensus 252 ~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~------------ 319 (560)
T PRK08974 252 LVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEF------------ 319 (560)
T ss_pred EEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCc------------
Confidence 8889999999999765 556788898877764 5888999999999999999999999888652100
Q ss_pred HHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhcc
Q 005991 376 FTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAI 455 (666)
Q Consensus 376 ~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~ 455 (666)
.....+++|.+++||+++++.+.+.|++.+|+++++.||+||++..++..
T Consensus 320 ------------------------------~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~ 369 (560)
T PRK08974 320 ------------------------------QELDFSSLKLSVGGGMAVQQAVAERWVKLTGQYLLEGYGLTECSPLVSVN 369 (560)
T ss_pred ------------------------------ccCCccceeEEEecCccCCHHHHHHHHHHhCCcEEeeecccccCceeecc
Confidence 00001379999999999999999999998899999999999998766544
Q ss_pred CCCC-CCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEec
Q 005991 456 DKGD-NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLP 534 (666)
Q Consensus 456 ~~~~-~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~ 534 (666)
.... ...+++|.|+|+++++|+| +++..++.+. .|||+++|+.++.||+++++.+++.| .+|||+|||+|++++
T Consensus 370 ~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~---~Gel~v~g~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~ 444 (560)
T PRK08974 370 PYDLDYYSGSIGLPVPSTEIKLVD-DDGNEVPPGE---PGELWVKGPQVMLGYWQRPEATDEVI-KDGWLATGDIAVMDE 444 (560)
T ss_pred CCCCcccCCccccCcCCCEEEEEC-CCCCCCCCCC---ceEEEEecCCcchhhcCChhhhhhhh-hcCCcccCCEEEEcC
Confidence 3322 3467899999999999999 4566666665 89999999999999999999999998 789999999999999
Q ss_pred CCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc-----ChhHHHHHHHHcCCC
Q 005991 535 GGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV-----DPDVLKDWAASQGIK 606 (666)
Q Consensus 535 dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~-----~~~~l~~~~~~~~l~ 606 (666)
+|.++++||.+|+|++ +|++|+|.+||+++.+||+|.+++|++.++. +.++++|+. +.++++++++++ ++
T Consensus 445 ~g~l~i~GR~~d~i~~-~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~l~~~l~~~-l~ 522 (560)
T PRK08974 445 EGFLRIVDRKKDMILV-SGFNVYPNEIEDVVMLHPKVLEVAAVGVPSEVSGEAVKIFVVKKDPSLTEEELITHCRRH-LT 522 (560)
T ss_pred CceEEEEecccceEEe-CCEEECHHHHHHHHHhCCCeeEEEEEeeecCCcceEEEEEEECCCCCCCHHHHHHHHHhh-cc
Confidence 9999999999999997 7999999999999999999999999987654 456677664 346788999988 87
Q ss_pred cccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 607 VIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 607 ~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
.+++|..+.+++ +|.+.+||++|++|++.
T Consensus 523 -----~~~~P~~~~~~~~lP~t~~GK~~r~~l~~~ 552 (560)
T PRK08974 523 -----GYKVPKLVEFRDELPKSNVGKILRRELRDE 552 (560)
T ss_pred -----cccCCcEEEEhhhCCCCCCCcEeHHHHHHH
Confidence 899999999885 77888899999999864
No 104
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=2.4e-61 Score=533.89 Aligned_cols=470 Identities=19% Similarity=0.220 Sum_probs=390.1
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
.++.++|.+.++.+|+++|+... + +.+||.||.++++++|.+|.+.|+++|++|+++++|+.+|+++++||
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~---~------~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~ 72 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYL---G------EKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGA 72 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeC---C------cEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 56889999999999999998653 2 35999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHH
Q 005991 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQ 238 (666)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (666)
+++|++++|+++.++.+++.++++.+++++++++..... ... .+..+.+++
T Consensus 73 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~----------------------~~~~~~~~~ 123 (503)
T PRK04813 73 VKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPL-------EIL----------------------GIPVITLDE 123 (503)
T ss_pred HHcCCEEecCCCCChHHHHHHHHHhcCCCEEEecccccc-------ccc----------------------CCcEEehHH
Confidence 999999999999999999999999999999999865410 000 011122222
Q ss_pred HHhcC--CCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHH
Q 005991 239 LQSQG--CSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQI 316 (666)
Q Consensus 239 ~~~~~--~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~ 316 (666)
+.... ...........++++++++|||||||.||||.+||+++...+.+....+.+..++++++.+|++|..+....+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 203 (503)
T PRK04813 124 LKDIFATGNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLY 203 (503)
T ss_pred hhhhhhccccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHH
Confidence 22211 0101112235678999999999999999999999999998888777778888999999999999999988888
Q ss_pred HHHHhCcEEEEec----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCC
Q 005991 317 VSVYYGVAVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT 392 (666)
Q Consensus 317 ~~l~~G~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~ 392 (666)
.++..|+++++++ .++..+++.++++++|++.++|+++..+......
T Consensus 204 ~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~----------------------------- 254 (503)
T PRK04813 204 PTLASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSF----------------------------- 254 (503)
T ss_pred HHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhcc-----------------------------
Confidence 8999999999877 4789999999999999999999998765432100
Q ss_pred CChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCCC-----CCCCCCcc
Q 005991 393 PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKG-----DNLSGHVG 466 (666)
Q Consensus 393 ~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~-----~~~~~~vG 466 (666)
.+...+++|.++++|+++++.+.+++.+.+ ++.+++.||+||++..++..... .....++|
T Consensus 255 -------------~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g 321 (503)
T PRK04813 255 -------------NEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIG 321 (503)
T ss_pred -------------CcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEecccccccCCCCccc
Confidence 000114799999999999999999999888 78999999999997654432211 13456799
Q ss_pred CCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhcc---CCCCeeecccEEEEecCCcEEEEcc
Q 005991 467 SPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVI---DGDGWLHTGDIGLWLPGGRLKIIDR 543 (666)
Q Consensus 467 ~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~---~~~gw~~TGDlg~~~~dG~l~i~GR 543 (666)
+|.++++++|+| +++..++.+. .|||+++|+.++.||+++++.|.+.| ++.+||+|||+|++ ++|++++.||
T Consensus 322 ~~~~~~~~~i~d-~~~~~~~~g~---~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR 396 (503)
T PRK04813 322 YAKPDSPLLIID-EEGTKLPDGE---QGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGR 396 (503)
T ss_pred ccCCCCEEEEEC-CCCCCCCCCC---ceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEecc
Confidence 999999999999 5666666554 89999999999999999999999887 23459999999999 9999999999
Q ss_pred CCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh----------hHHHHHHHHcCCCcccc
Q 005991 544 KKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP----------DVLKDWAASQGIKVIYC 610 (666)
Q Consensus 544 ~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~----------~~l~~~~~~~~l~~~~~ 610 (666)
.||+||+ +|++|+|.+||+.+.++|+|.+++|++.+++ +.++++|++++ +.++++++++ ++
T Consensus 397 ~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~-l~---- 470 (503)
T PRK04813 397 IDFQIKL-NGYRIELEEIEQNLRQSSYVESAVVVPYNKDHKVQYLIAYVVPKEEDFEREFELTKAIKKELKER-LM---- 470 (503)
T ss_pred ccceEEE-CcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCCccEEEEEEEeccccccccchhHHHHHHHHHhh-Cc----
Confidence 9999997 8999999999999999999999999986543 57889888754 2477888887 87
Q ss_pred cccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 611 FSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 611 ~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
.+++|..+++++ +|.+.+||++|++|++.
T Consensus 471 -~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~ 500 (503)
T PRK04813 471 -EYMIPRKFIYRDSLPLTPNGKIDRKALIEE 500 (503)
T ss_pred -cccCCeEEEEeccCCCCCCCCCcHHHHHHH
Confidence 899999999995 78888899999999864
No 105
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.2e-61 Score=532.44 Aligned_cols=481 Identities=19% Similarity=0.208 Sum_probs=389.8
Q ss_pred HHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeE
Q 005991 86 IYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYIS 165 (666)
Q Consensus 86 ~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 165 (666)
...++++||++|+.+. ++ .+.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 4 ~~~a~~~p~~~a~~~~---~~----~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~ 76 (511)
T PRK13391 4 GIHAQTTPDKPAVIMA---ST----GEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYY 76 (511)
T ss_pred hhhHhhCCCceEEEec---CC----CCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEE
Confidence 4678899999999763 21 2459999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCCC
Q 005991 166 VPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCS 245 (666)
Q Consensus 166 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (666)
+|+++.++.+++.+++++++++.++++......+.+....++.....+.++..... .....+.+......
T Consensus 77 ~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~- 146 (511)
T PRK13391 77 TCVNSHLTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGEL---------EGFVGYAEAVAGLP- 146 (511)
T ss_pred eccccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCC---------cccccHHHHhcCCC-
Confidence 99999999999999999999999999988777666665556655555555432110 01123443332111
Q ss_pred CCCCCCCCCCCCcEEEEeccCCCCCccEEEe--cHHHHHHHH---hhcccccccCCCcEEEEcCChHHHHHHHHHHHHHH
Q 005991 246 SPQPFCPPKPEDIATICYTSGTTGTPKGAVL--THGNLISNV---AGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVY 320 (666)
Q Consensus 246 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~--th~~l~~~~---~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~ 320 (666)
. ....+.++.++++|||||||.||||++ +|.++.... ......+++.+++++++.+|++|.+++...+.++.
T Consensus 147 --~-~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~ 223 (511)
T PRK13391 147 --A-TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVMLVIR 223 (511)
T ss_pred --C-CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHHHHHH
Confidence 1 111234567899999999999999995 466654322 23334466788999999999999999888888899
Q ss_pred hCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhH
Q 005991 321 YGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDR 399 (666)
Q Consensus 321 ~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~ 399 (666)
.|+++++.+ .++..+++.++++++|++.++|+++..+........ +
T Consensus 224 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~--------------------------------~- 270 (511)
T PRK13391 224 LGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVR--------------------------------D- 270 (511)
T ss_pred cCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhc--------------------------------c-
Confidence 999999887 799999999999999999999999987754211000 0
Q ss_pred HhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC-CCCCCCccCCccCcEEEEEe
Q 005991 400 LVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPACEIKLVD 478 (666)
Q Consensus 400 ~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~~v~ivd 478 (666)
....+++|.+++||+++++++.+.+++.+|..+++.||+||++.++...... ....+++|+|.++ +++|+|
T Consensus 271 -------~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~g-~~~i~d 342 (511)
T PRK13391 271 -------KYDLSSLEVAIHAAAPCPPQVKEQMIDWWGPIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAMFG-DLHILD 342 (511)
T ss_pred -------cCCccceeEEEEccCCCCHHHHHHHHHHcCCceeeeeccccccceEEecCccccccCCCcCCcccc-eEEEEC
Confidence 0001489999999999999999999998899999999999998765433221 2456789999999 699998
Q ss_pred cCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCC-CeeecccEEEEecCCcEEEEccCCCeEEcCCeeeec
Q 005991 479 VPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGD-GWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVA 557 (666)
Q Consensus 479 ~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~-gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~ 557 (666)
+++...+.+. .|||+++|+ ++.|||++++.+++.+..+ +||+|||+|+++++|.+++.||.||++|+ +|++|+
T Consensus 343 -~~~~~~~~g~---~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~-~G~~v~ 416 (511)
T PRK13391 343 -DDGAELPPGE---PGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMIIS-GGVNIY 416 (511)
T ss_pred -CCCCCCCCCC---ceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEEe-CCEEEC
Confidence 5566555554 899999999 8999999999999988655 99999999999999999999999999996 899999
Q ss_pred cHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcC---------hhHHHHHHHHcCCCcccccccccCcchhHHH-H
Q 005991 558 PEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVD---------PDVLKDWAASQGIKVIYCFSFRANSHVIFIA-L 624 (666)
Q Consensus 558 p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~---------~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~ 624 (666)
|.+||+++.+||.|.+|+|++.++. +.+++++++. .+++.++++++ ++ .+++|..|.+++ +
T Consensus 417 ~~eie~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-l~-----~~~~P~~i~~~~~~ 490 (511)
T PRK13391 417 PQEAENLLITHPKVADAAVFGVPNEDLGEEVKAVVQPVDGVDPGPALAAELIAFCRQR-LS-----RQKCPRSIDFEDEL 490 (511)
T ss_pred HHHHHHHHHhCCCcceEEEEecCCcccCceeEEEEEECCCCCcccchHHHHHHHHHhh-cc-----cCcCCcEEEEeecC
Confidence 9999999999999999999987644 4678888752 25788999988 88 999999999985 7
Q ss_pred HHHHhhhhhhhhhcc
Q 005991 625 IHNLCQLYSSKELFR 639 (666)
Q Consensus 625 ~~~~~gK~~r~~l~~ 639 (666)
|.+.+||++|+.|++
T Consensus 491 P~t~~gKv~r~~l~~ 505 (511)
T PRK13391 491 PRLPTGKLYKRLLRD 505 (511)
T ss_pred CCCCccceeHHHHHH
Confidence 888889999999876
No 106
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.2e-62 Score=569.79 Aligned_cols=530 Identities=16% Similarity=0.185 Sum_probs=387.6
Q ss_pred HHHhhHHHHhhccccCCcCCCccccCCCCccccccCCCceEEcCCCCCCCcCccccCCCCCCcccccCCCCCCCCCHHHH
Q 005991 5 SAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHDN 84 (666)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~~ 84 (666)
.++--..|-+.+++.+|+++++.+.+.....- | ...| +. .. ..+...|+.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~--------~~~~-------~~-~~-~~~~~~sl~~l 452 (994)
T PRK07868 401 EAALALARGAADAAVAANRSVRTLAVETARTL-----------P--------RLAR-------LG-QI-NDHTRISLGRI 452 (994)
T ss_pred HHHHHHhhhHHHHHHHhhhhhHHHHHHHHHhh-----------h--------hHHH-------hh-hc-CCCCCccHHHH
Confidence 34444566677778888888888765432210 0 0000 00 01 11345689999
Q ss_pred HHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCe
Q 005991 85 FIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYI 164 (666)
Q Consensus 85 ~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~ 164 (666)
|+++++++||++|+.+. + +.+||+||+++++++|++|.+.|+++||+|+|+++|+++|+++++||+++|++
T Consensus 453 l~~~a~~~pd~~Al~~~---~------~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav 523 (994)
T PRK07868 453 IAEQARDAPKGEFLLFD---G------RVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAV 523 (994)
T ss_pred HHHHHHHCCCCeEEEeC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCE
Confidence 99999999999999763 2 35999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCC
Q 005991 165 SVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGC 244 (666)
Q Consensus 165 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (666)
++|+++. +++.+++++++++++|++....+.+.+. ...+++++.......... ......++++......
T Consensus 524 ~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~------~~~iiv~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 592 (994)
T PRK07868 524 AVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL------PGRVLVLGGGESRDLDLP--DDADVIDMEKIDPDAV 592 (994)
T ss_pred EEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc------CceEEEecCCccccccCC--cchhhhhhhhcCcccc
Confidence 9999985 6899999999999999987766554321 134455543211000000 0000111221111100
Q ss_pred CCC--CCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHH-HHHh
Q 005991 245 SSP--QPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIV-SVYY 321 (666)
Q Consensus 245 ~~~--~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~-~l~~ 321 (666)
..+ ....+..++|+++|+|| ||||.||++.++|.+...........+++.++|++++.+|++|++++...+. ++..
T Consensus 593 ~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~g 671 (994)
T PRK07868 593 ELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVVG 671 (994)
T ss_pred cCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhcc
Confidence 000 01112246899999999 5888888888888776554444445577889999999999999999987655 4555
Q ss_pred CcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHH
Q 005991 322 GVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRL 400 (666)
Q Consensus 322 G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~ 400 (666)
|+++++.+ +++..+++.|+++++|+++++|+++..|.+.... ...
T Consensus 672 G~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~-------------------------------~~~--- 717 (994)
T PRK07868 672 GSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAF-------------------------------VLH--- 717 (994)
T ss_pred ceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCC-------------------------------ccC---
Confidence 55565655 7999999999999999999999999887652000 000
Q ss_pred hhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhC-CccccCcccchhhhhhhccCCCCCCCCCccCCccCc-EEEEEe
Q 005991 401 VFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG-CQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPAC-EIKLVD 478 (666)
Q Consensus 401 ~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~-~v~ivd 478 (666)
..+++|.++ | +.+++++.+.+.+.++ +++++.||+||++...+. ......+++|+|+|++ +++|.+
T Consensus 718 --------~~~slr~~~-g-~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~~--~~~~~~~svG~p~pg~~~v~i~~ 785 (994)
T PRK07868 718 --------GNHPVRLFI-G-SGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLAN--VSGAKIGSKGRPLPGAGRVELAA 785 (994)
T ss_pred --------CCCceEEEe-c-CCCCHHHHHHHHHHhCchheeeeeecccccccccc--cCCCCCcccCCccCCCCceeEEE
Confidence 003788776 3 3499999999998886 889999999998754332 2234568999999998 777652
Q ss_pred cC---------CCCCCCCCCCCCccEEEEeCCCcCccccCChhhhh--hccC-CCCeeecccEEEEecCCcEEEEccCCC
Q 005991 479 VP---------EMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTR--EVID-GDGWLHTGDIGLWLPGGRLKIIDRKKN 546 (666)
Q Consensus 479 ~~---------~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~--~~~~-~~gw~~TGDlg~~~~dG~l~i~GR~~d 546 (666)
.+ +.++.....+++.|||+++|+.. + +|+.+. ..|. ++|||+|||+|++|+||+|+|+||+||
T Consensus 786 ~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~----~-~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd 860 (994)
T PRK07868 786 YDPEHDLILEDDRGFVRRAEVNEVGVLLARARGP----I-DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGS 860 (994)
T ss_pred ecCcCCceeecCCceEEEcCCCCceEEEEecCCC----C-ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCC
Confidence 11 11111122344689999999864 3 465543 2353 589999999999999999999999999
Q ss_pred eEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC--CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcc
Q 005991 547 IFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN--SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSH 618 (666)
Q Consensus 547 ~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~--~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~ 618 (666)
+||+ +|++|+|.|||++|.+||+|.+|+|++.+++ +.++|+|+++ +++++++++ + ++ .|++|+.
T Consensus 861 ~Ik~-~G~~I~p~EIE~~L~~hp~V~~aaVvg~~d~~~~~~~a~Vv~~~~~~~~~~~L~~~l~-~-l~-----~y~vP~~ 932 (994)
T PRK07868 861 VIRT-ARGPVYTEPVTDALGRIGGVDLAVTYGVEVGGRQLAVAAVTLRPGAAITAADLTEALA-S-LP-----VGLGPDI 932 (994)
T ss_pred EEEe-CCceEcHHHHHHHHhcCCCeeEEEEEeecCCCCceEEEEEEeCCCCcCCHHHHHHHHH-h-CC-----CCcCCeE
Confidence 9997 7889999999999999999999999997754 5789999853 478999998 4 77 9999999
Q ss_pred hhHHH-HHHHHhhhhhhhhhccchh
Q 005991 619 VIFIA-LIHNLCQLYSSKELFRSRC 642 (666)
Q Consensus 619 i~~v~-~~~~~~gK~~r~~l~~~~~ 642 (666)
|.+++ +|.+.+||++|++|++...
T Consensus 933 i~~v~~lP~T~sGKi~r~~L~~~~l 957 (994)
T PRK07868 933 VHVVPEIPLSATYRPTVSALRAAGI 957 (994)
T ss_pred EEEeCCCCCCccccEehHHHHhcCC
Confidence 99995 8888889999999987744
No 107
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-60 Score=531.21 Aligned_cols=491 Identities=19% Similarity=0.227 Sum_probs=396.2
Q ss_pred CHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHH
Q 005991 80 TLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACS 159 (666)
Q Consensus 80 tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~ 159 (666)
|+.++|.+.++++||++|+.+. + +.+||.||.++++++|++|.+.|+++||+|+++++|+++|+++++||+
T Consensus 4 ~l~~~~~~~a~~~p~~~a~~~~---~------~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~ 74 (533)
T PRK07798 4 NIADLFEAVADAVPDRVALVCG---D------RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAF 74 (533)
T ss_pred cHHHHHHHHHHhCCCceEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 7899999999999999999763 2 459999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHH
Q 005991 160 AYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQL 239 (666)
Q Consensus 160 ~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (666)
++|++++|+++.++.+++.++++++++++++++......+.+....++..+.++.++...... .....++++++
T Consensus 75 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 148 (533)
T PRK07798 75 KARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGND------LLPGAVDYEDA 148 (533)
T ss_pred hcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccc------cCCccccHHHH
Confidence 999999999999999999999999999999999887777777666667777777776432110 00123567777
Q ss_pred HhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---------ccc------CCCcEEEEcC
Q 005991 240 QSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---------VQF------YPSDIYMSYL 304 (666)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---------~~~------~~~d~~l~~~ 304 (666)
........ ... ...++.++|+|||||||.||||+++|+++...+...... ..+ ..+++++..+
T Consensus 149 ~~~~~~~~-~~~-~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (533)
T PRK07798 149 LAAGSPER-DFG-ERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAP 226 (533)
T ss_pred HhccCCcC-CCC-CCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEec
Confidence 65433211 111 223455799999999999999999999987654432211 111 5678999999
Q ss_pred ChHHHHHHHHHHHHHHhCcEEEEec---CCHHHHHHHHHhhcCeEEeechHHHHHHH-HHHHHHHhhcchHHHHHHHHHH
Q 005991 305 PLAHIYERANQIVSVYYGVAVGFYQ---GDNLKLMDDLAVLKPTIFPSVPRLYNRIY-AGITNAVKASGTLREKLFTAAY 380 (666)
Q Consensus 305 pl~h~~~~~~~~~~l~~G~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~-~~~~~~~~~~~~~~~~l~~~~~ 380 (666)
|++|.+++...+.+++.|+++++.+ .++..+++.++++++|++.++|..+...+ ..+. .
T Consensus 227 pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~-~---------------- 289 (533)
T PRK07798 227 PLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALE-A---------------- 289 (533)
T ss_pred chhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhc-c----------------
Confidence 9999999998889999999999987 58999999999999999999998765432 2111 0
Q ss_pred HHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCCCC
Q 005991 381 NSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGD 459 (666)
Q Consensus 381 ~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~ 459 (666)
.......++|.+++||+++++++.+++++.+ +..+++.||+||++...+.....
T Consensus 290 ------------------------~~~~~~~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~- 344 (533)
T PRK07798 290 ------------------------RGPYDLSSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAK- 344 (533)
T ss_pred ------------------------cccCCCCceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCCC-
Confidence 0000114899999999999999999999887 78999999999986554433221
Q ss_pred CCCCCcc--CCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccC---CCCeeecccEEEEec
Q 005991 460 NLSGHVG--SPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVID---GDGWLHTGDIGLWLP 534 (666)
Q Consensus 460 ~~~~~vG--~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~---~~gw~~TGDlg~~~~ 534 (666)
.....| .+.++..++|+| +++..++.+.++ .|+|+ +++.++.|||++++.|++.|. +++||+|||+|++|+
T Consensus 345 -~~~~~g~~~~~~~~~~~i~~-~~~~~~~~g~~~-~g~l~-~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~ 420 (533)
T PRK07798 345 -GAVHTGGPRFTIGPRTVVLD-EDGNPVEPGSGE-IGWIA-RRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEA 420 (533)
T ss_pred -CCccCCCCccCCCceEEEEC-CCCCCCCCCCCC-eeEEE-eecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcC
Confidence 112344 788999999999 555566665521 26665 566899999999999999883 346999999999999
Q ss_pred CCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc------ChhHHHHHHHHcCC
Q 005991 535 GGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV------DPDVLKDWAASQGI 605 (666)
Q Consensus 535 dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~------~~~~l~~~~~~~~l 605 (666)
||++++.||.||+||. +|++|+|.+||+++.++|.|.+++|++.++. +.++++|++ +.+++.++++++ +
T Consensus 421 ~g~l~~~GR~~~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~-l 498 (533)
T PRK07798 421 DGTITLLGRGSVCINT-GGEKVFPEEVEEALKAHPDVADALVVGVPDERWGQEVVAVVQLREGARPDLAELRAHCRSS-L 498 (533)
T ss_pred CCcEEEEccccceEec-CCEEeCHHHHHHHHHhCccceeEEEEeccCcccCceEEEEEEECCCCCCCHHHHHHHHhhh-c
Confidence 9999999999999996 8999999999999999999999999997643 568888874 447889999988 8
Q ss_pred CcccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 606 KVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 606 ~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
+ .+++|..+++++ +|++.+||++|+.|++.
T Consensus 499 ~-----~~~~P~~i~~~~~iP~t~~GK~~~~~~~~~ 529 (533)
T PRK07798 499 A-----GYKVPRAIWFVDEVQRSPAGKADYRWAKEQ 529 (533)
T ss_pred c-----cCCCCeEEEEcccCCCCCcchhhHHHHhhh
Confidence 7 899999999885 78888899999999986
No 108
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-61 Score=528.89 Aligned_cols=433 Identities=24% Similarity=0.316 Sum_probs=366.5
Q ss_pred HHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeE
Q 005991 86 IYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYIS 165 (666)
Q Consensus 86 ~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~ 165 (666)
...++++|+++|+.+. + +.+||+||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 10 ~~~a~~~~~~~a~~~~---~------~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~ 80 (458)
T PRK09029 10 RHWAQVRPQAIALRLN---D------EVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARV 80 (458)
T ss_pred HHHHHhCCCceeeecC---C------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEE
Confidence 4558899999999642 2 349999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCCC
Q 005991 166 VPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCS 245 (666)
Q Consensus 166 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (666)
+|+++.++++++.++++++++++++++.+... +. .+.... ... .
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-------~~~~~~----------------------~~~------~ 124 (458)
T PRK09029 81 LPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FS-------ALTSLH----------------------LQL------V 124 (458)
T ss_pred eecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hh-------hccccc----------------------ccc------c
Confidence 99999999999999999999999998765421 10 000000 000 0
Q ss_pred CCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEE
Q 005991 246 SPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAV 325 (666)
Q Consensus 246 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~ 325 (666)
.........++++++++|||||||.||||++||++++..+......+++.++|+++..+|++|.+++...+.++..|+++
T Consensus 125 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v 204 (458)
T PRK09029 125 EGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYAGATL 204 (458)
T ss_pred cccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHHhCCceE
Confidence 00111234678999999999999999999999999999988877778889999999999999999988777889999999
Q ss_pred EEecCCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHH
Q 005991 326 GFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKI 405 (666)
Q Consensus 326 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~ 405 (666)
++.+. ..+++.+ .++|.+..+|+++..+......
T Consensus 205 ~~~~~--~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~------------------------------------------ 238 (458)
T PRK09029 205 VVRDK--QPLEQAL--AGCTHASLVPTQLWRLLDNRSE------------------------------------------ 238 (458)
T ss_pred EeCCh--HHHHHHH--hhceeeecChHHHHHHHhcccc------------------------------------------
Confidence 98664 5566666 4799999999999877652100
Q ss_pred HHHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCccCcEEEEEecCCCCCC
Q 005991 406 RERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYT 485 (666)
Q Consensus 406 ~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~ivd~~~~~~~ 485 (666)
..++|.+++||+++++.+.+++.. +|+++++.||+||++...+.... ....++|+|+++++++|++
T Consensus 239 ----~~~l~~i~~gG~~~~~~~~~~~~~-~g~~~~~~YG~tE~~~~~~~~~~--~~~~~~G~~~~~~~~~i~~------- 304 (458)
T PRK09029 239 ----PLSLKAVLLGGAAIPVELTEQAEQ-QGIRCWCGYGLTEMASTVCAKRA--DGLAGVGSPLPGREVKLVD------- 304 (458)
T ss_pred ----CCcceEEEECCCCCCHHHHHHHHH-cCCcEeccccccccCcceeccCC--CCCCCCCCCCCCCEEEEeC-------
Confidence 137999999999999999999886 59999999999999865443322 2235699999999999976
Q ss_pred CCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHH
Q 005991 486 SEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVY 565 (666)
Q Consensus 486 ~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l 565 (666)
|||+|+|+.++.||+++++.+.... .+|||+|||+|++| ||.++|.||+||+||+ +|++|+|.|||+++
T Consensus 305 --------gel~v~g~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~-~G~~v~p~eiE~~l 373 (458)
T PRK09029 305 --------GEIWLRGASLALGYWRQGQLVPLVN-DEGWFATRDRGEWQ-NGELTILGRLDNLFFS-GGEGIQPEEIERVI 373 (458)
T ss_pred --------CEEEEecCceeeeeecCcccccccc-CCCccCCCCcEEEe-CCEEEEecccccceee-CCEEeCHHHHHHHH
Confidence 8999999999999999999887654 78999999999999 9999999999999997 89999999999999
Q ss_pred hcCcCcceEEEEEeCCC---CeEEEEEEcC----hhHHHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhh
Q 005991 566 AKCKFVLQCFIYGDSFN---SCLVAIVAVD----PDVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKEL 637 (666)
Q Consensus 566 ~~~p~V~~~~V~g~~~~---~~~va~vv~~----~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l 637 (666)
.+||+|.+|+|++.++. +.++|+|+++ .++++++++++ ++ .|++|..+.+++ +|++.+||++|+.|
T Consensus 374 ~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~l~~~~~~~-l~-----~~~~P~~~~~~~~~p~t~~gKi~r~~L 447 (458)
T PRK09029 374 NQHPLVQQVFVVPVADAEFGQRPVAVVESDSEAAVVNLAEWLQDK-LA-----RFQQPVAYYLLPPELKNGGIKISRQAL 447 (458)
T ss_pred hcCCCcceEEEEccCCcccCceEEEEEEcCcccCHHHHHHHHHhh-ch-----hccCCeEEEEecccccCcCCCcCHHHH
Confidence 99999999999998765 5788988864 57899999998 88 999999999996 88888899999999
Q ss_pred ccc
Q 005991 638 FRS 640 (666)
Q Consensus 638 ~~~ 640 (666)
++.
T Consensus 448 ~~~ 450 (458)
T PRK09029 448 KEW 450 (458)
T ss_pred HHH
Confidence 865
No 109
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-60 Score=535.77 Aligned_cols=490 Identities=18% Similarity=0.219 Sum_probs=362.0
Q ss_pred CHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHH
Q 005991 80 TLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACS 159 (666)
Q Consensus 80 tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~ 159 (666)
++.++|++.+..+|+++|+.+........+..+.+||+||.++++++|++|.+.| .+||+|+++++|+++|+++++||+
T Consensus 2 s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~~ 80 (578)
T PRK05850 2 SVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGAL 80 (578)
T ss_pred cHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHHH
Confidence 6789999999999999999875111011123467999999999999999999999 689999999999999999999999
Q ss_pred hcCCeEEecCC---CCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCC--CceEEEEeCCCCCCCCCCCCCCCcEEE
Q 005991 160 AYSYISVPLYD---TLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIP--SVHLIVVVGGKDEHLPSLPSTSGVKLI 234 (666)
Q Consensus 160 ~~G~~~vpl~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~l~~ii~~~~~~~~~~~~~~~~~~~~~ 234 (666)
++|++++|+++ .++.+++.++|++++++++++++...+.+.+.....+ ....++..+..
T Consensus 81 ~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 144 (578)
T PRK05850 81 QAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLL---------------- 144 (578)
T ss_pred HcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeeccc----------------
Confidence 99999999997 5578999999999999999999877665544322111 11112221110
Q ss_pred ehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc-cc-----cCCCcEEEEcCChHH
Q 005991 235 SYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM-VQ-----FYPSDIYMSYLPLAH 308 (666)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~-~~-----~~~~d~~l~~~pl~h 308 (666)
++. ...........++++++|+|||||||.||||++||+++++.+...... +. ...++++++++|++|
T Consensus 145 ---~~~---~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h 218 (578)
T PRK05850 145 ---DLD---SPRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYH 218 (578)
T ss_pred ---ccc---cCCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCC
Confidence 000 000011123467899999999999999999999999998876554332 12 356889999999999
Q ss_pred HHHHHH-HHHHHHhCcEEEEec-----CCHHHHHHHHHhhcCeEEeechHHHHHHHHH-HHHHHhhcchHHHHHHHHHHH
Q 005991 309 IYERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAG-ITNAVKASGTLREKLFTAAYN 381 (666)
Q Consensus 309 ~~~~~~-~~~~l~~G~~~~~~~-----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~~~~~~~~~l~~~~~~ 381 (666)
.+++.. .+.+++.|+++++.+ .++..+++.+++++++++ .+|..+..+... ....
T Consensus 219 ~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~----------------- 280 (578)
T PRK05850 219 DMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDD----------------- 280 (578)
T ss_pred CchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchh-----------------
Confidence 999876 678899999999876 278999999999999865 566654433221 0000
Q ss_pred HHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhC------CccccCcccchhhhhhhcc
Q 005991 382 SKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG------CQVMEGYGMTETSCIISAI 455 (666)
Q Consensus 382 ~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~------~~v~~~YG~TE~~~~~~~~ 455 (666)
.......+++|.+++||+++++++.+.|.+.++ ..+.+.||+||++..+...
T Consensus 281 ----------------------~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~ 338 (578)
T PRK05850 281 ----------------------DMAGLDLGGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATR 338 (578)
T ss_pred ----------------------hhcCcchhhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheecc
Confidence 000000137999999999999999999888763 3689999999987654432
Q ss_pred CCCCC-------------------------CCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCC
Q 005991 456 DKGDN-------------------------LSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKN 510 (666)
Q Consensus 456 ~~~~~-------------------------~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~ 510 (666)
..... ...++|.|. +.+++|+|.+++..++.++ .|||+|+|++++.|||++
T Consensus 339 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd~~~~~~~~~g~---~Gel~v~g~~~~~gY~~~ 414 (578)
T PRK05850 339 EPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVDPDTCIECPAGT---VGEIWVHGDNVAAGYWQK 414 (578)
T ss_pred CCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEcCCCCcCCCCCC---EEEEEEecCcccccccCC
Confidence 21100 011345554 5799999966666666654 899999999999999999
Q ss_pred hhhhhhccC-----------CCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEe
Q 005991 511 EVQTREVID-----------GDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGD 579 (666)
Q Consensus 511 ~~~t~~~~~-----------~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~ 579 (666)
|+.|++.|. .+|||+|||+|+++ ||+|+|+||+||+||+ +|++|+|.|||++|.+||.+. ++|++.
T Consensus 415 ~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~-~G~~i~p~eIE~~l~~~~~~~-~~v~~v 491 (578)
T PRK05850 415 PEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIV-DGRNHYPDDIEATIQEITGGR-VAAISV 491 (578)
T ss_pred hhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEE-CCeecCHHHHHHHHHHhcCCc-EEEEEe
Confidence 999999984 25799999999997 9999999999999997 899999999999999999954 777776
Q ss_pred CCC--CeEEEEEEcCh------hH--HHHHHHHcCCCcccc-cccccCcchhHH---HHHHHHhhhhhhhhhccc
Q 005991 580 SFN--SCLVAIVAVDP------DV--LKDWAASQGIKVIYC-FSFRANSHVIFI---ALIHNLCQLYSSKELFRS 640 (666)
Q Consensus 580 ~~~--~~~va~vv~~~------~~--l~~~~~~~~l~~~~~-~~~~~p~~i~~v---~~~~~~~gK~~r~~l~~~ 640 (666)
++. +.++|+|++.+ +. ...+++++ +...+. .....|..+.++ ++|++.+||++|++|++.
T Consensus 492 ~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~l~~~-v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~ 565 (578)
T PRK05850 492 PDDGTEKLVAIIELKKRGDSDEEAMDRLRTVKRE-VTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQ 565 (578)
T ss_pred cCCCceEEEEEEEeccccCcchhhhhhHHHHHHH-HHHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHH
Confidence 644 57889988642 11 12233333 221111 012245555555 478888999999999864
No 110
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=3.5e-61 Score=530.30 Aligned_cols=446 Identities=15% Similarity=0.131 Sum_probs=330.7
Q ss_pred cCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEcccc------HHHHHHhhhcCCCceEEEEeCCC
Q 005991 145 LINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT------LNTLLSFISEIPSVHLIVVVGGK 218 (666)
Q Consensus 145 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~------~~~~~~~~~~~~~l~~ii~~~~~ 218 (666)
++|++|+++++|||+++|++++|+++.++.+++.++|++++++++|+++.. .+.+.+.....+ .+.+++....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~ 79 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAP-AKAIVLPAAG 79 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhccc-ceEEEEeccC
Confidence 589999999999999999999999999999999999999999999998642 122222222222 2333332211
Q ss_pred CCCCCCCCCCCCcEEEehHHHHhcCCC------CCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccccc
Q 005991 219 DEHLPSLPSTSGVKLISYLQLQSQGCS------SPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMV 292 (666)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~ 292 (666)
.... .. ......+|+++...+.. .........++|+++|+|||||||.||||++||++++..+......+
T Consensus 80 ~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~ 155 (499)
T PLN03051 80 EPVA---VP-LREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHM 155 (499)
T ss_pred cccC---Cc-cccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhc
Confidence 1000 00 00012356665532211 01111123568999999999999999999999999887665555556
Q ss_pred ccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcch
Q 005991 293 QFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGT 370 (666)
Q Consensus 293 ~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 370 (666)
++.++|++++.+|++|.+++...+.+++.|+++++++ .++..+++.|+++++|++.++|+++..|.+......
T Consensus 156 ~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~----- 230 (499)
T PLN03051 156 DIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAM----- 230 (499)
T ss_pred CCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCcccc-----
Confidence 7889999999999999999877778899999999886 578999999999999999999999988765210000
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh--CCccccCcccchh
Q 005991 371 LREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF--GCQVMEGYGMTET 448 (666)
Q Consensus 371 ~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~--~~~v~~~YG~TE~ 448 (666)
.....++||.+++||+++++++.+++++.+ +++++++||+||+
T Consensus 231 -----------------------------------~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~ 275 (499)
T PLN03051 231 -----------------------------------EGLDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTEL 275 (499)
T ss_pred -----------------------------------ccCCchhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccc
Confidence 000003799999999999999998877643 4789999999998
Q ss_pred hhhhhccCC-CCCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCc--CccccCChhhhhhccCC-----
Q 005991 449 SCIISAIDK-GDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIV--FQGYYKNEVQTREVIDG----- 520 (666)
Q Consensus 449 ~~~~~~~~~-~~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v--~~GY~~~~~~t~~~~~~----- 520 (666)
+..++.... .....+++|+|.++++++|+| ++++.++.++ +..|||+++|+.+ +.|||+++ .++..+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd-~~g~~~~~g~-~~~Gel~v~g~~~~~~~gy~~~~-~~~~~~~g~~~~~ 352 (499)
T PLN03051 276 ASGYISSTLLQPQAPGAFSTASLGTRFVLLN-DNGVPYPDDQ-PCVGEVALAPPMLGASDRLLNAD-HDKVYYKGMPMYG 352 (499)
T ss_pred cceeecccccCCCCCccccCCCCCceEEEEC-CCCCCCCCCC-CcceEEEEecCcCCCCccccCCc-ccceeeecCCccc
Confidence 654332221 223567899999999999999 5666665552 1379999999976 58999765 34433321
Q ss_pred ---CCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhc-CcCcceEEEEEeCCC----CeEEEEE---
Q 005991 521 ---DGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAK-CKFVLQCFIYGDSFN----SCLVAIV--- 589 (666)
Q Consensus 521 ---~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~-~p~V~~~~V~g~~~~----~~~va~v--- 589 (666)
.+||+|||+|++|+||+|+|+||+||+||+ +|+||+|.|||++|.+ ||+|.+|+|+|.+++ +.++|+|
T Consensus 353 ~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~-~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~ 431 (499)
T PLN03051 353 SKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNL-GGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLG 431 (499)
T ss_pred cCCcceeecCCeEEECCCCcEEEEeccCCEEee-CCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcc
Confidence 127999999999999999999999999996 8999999999999985 999999999997753 4688888
Q ss_pred Ec-------ChhHHHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccch
Q 005991 590 AV-------DPDVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRSR 641 (666)
Q Consensus 590 v~-------~~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~~ 641 (666)
++ +.++++++|+++ +...+. .++.|..|.+++ +|++.+||++|++|++..
T Consensus 432 v~~~~~~~~~~~~l~~~~~~~-l~~~l~-~~~~~~~i~~v~~lP~t~~GKi~r~~L~~~~ 489 (499)
T PLN03051 432 EEKKGFDQARPEALQKKFQEA-IQTNLN-PLFKVSRVKIVPELPRNASNKLLRRVLRDQL 489 (499)
T ss_pred eecccccccchHHHHHHHHHH-HHhhcC-CccCCceEEEcCCCCCCCCccHHHHHHHHHH
Confidence 54 235777777655 432211 444455688885 888888999999998653
No 111
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.2e-60 Score=521.21 Aligned_cols=462 Identities=21% Similarity=0.271 Sum_probs=380.6
Q ss_pred eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEE
Q 005991 112 KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFC 191 (666)
Q Consensus 112 ~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 191 (666)
+.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++++
T Consensus 10 ~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHHHhhhcCC-CceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCC
Q 005991 192 IPQTLNTLLSFISEIP-SVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGT 270 (666)
Q Consensus 192 ~~~~~~~~~~~~~~~~-~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~ 270 (666)
+......+.+..+..+ .++.++..+... .....|++....... ......++.++++|||||||.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~----~~~~~~~~~a~i~~TSGtTG~ 154 (502)
T PRK08276 90 SAALADTAAELAAELPAGVPLLLVVAGPV-----------PGFRSYEEALAAQPD----TPIADETAGADMLYSSGTTGR 154 (502)
T ss_pred ccchhhHHHHHhhhccccccEEEEeCCCC-----------CccccHHHHHhcCCC----CCCCCCCcceEEEECCCCCCC
Confidence 9877766655555554 455555543211 112345554432211 112355778999999999999
Q ss_pred ccEEEecHHHHHHHH------hhcccccccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-CCHHHHHHHHHhhc
Q 005991 271 PKGAVLTHGNLISNV------AGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ-GDNLKLMDDLAVLK 343 (666)
Q Consensus 271 PKgV~~th~~l~~~~------~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~ 343 (666)
||||+++|.++.... ...........++++++.+|++|.+++...+.++..|+++++.+ +++..+++.+++++
T Consensus 155 PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~ 234 (502)
T PRK08276 155 PKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALALIERYR 234 (502)
T ss_pred CceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHHHHHhC
Confidence 999999987754322 11111222357889999999999999888888999999998887 79999999999999
Q ss_pred CeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCC
Q 005991 344 PTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPL 423 (666)
Q Consensus 344 ~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l 423 (666)
+|++.++|+++..+.+...... ..+| .+++|.+++||+++
T Consensus 235 ~t~~~~~P~~~~~l~~~~~~~~-----------------------------~~~~-----------~~~lr~i~~~g~~~ 274 (502)
T PRK08276 235 VTHSQLVPTMFVRMLKLPEEVR-----------------------------ARYD-----------VSSLRVAIHAAAPC 274 (502)
T ss_pred CeEEEehHHHHHHHHhCccccC-----------------------------CCCC-----------cccceEEEecCCCC
Confidence 9999999999988765210000 0000 14899999999999
Q ss_pred cHHHHHHHHHHhCCccccCcccchhhhhhhccCCC-CCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCC
Q 005991 424 SPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPI 502 (666)
Q Consensus 424 ~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~ 502 (666)
++++.+++.+.++..+++.||+||++.+++..... ....+++|.|+ +++++|+| ++++.++.+. .|||+++|+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~g~---~Gel~v~~~~ 349 (502)
T PRK08276 275 PVEVKRAMIDWWGPIIHEYYASSEGGGVTVITSEDWLAHPGSVGKAV-LGEVRILD-EDGNELPPGE---IGTVYFEMDG 349 (502)
T ss_pred CHHHHHHHHHHhCcHhhhhcccccccceeEecCccccccCCCcceec-ccEEEEEC-CCCCCCcCCC---ceEEEEECCC
Confidence 99999999998899999999999998755543322 24567899999 88999999 5666666664 8999999999
Q ss_pred cCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC
Q 005991 503 VFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN 582 (666)
Q Consensus 503 v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~ 582 (666)
++.||+++++.+++.+..+|||+|||+|+++++|.+++.||.||+||+ +|++|+|.+||.++.++|+|.+|+|++..++
T Consensus 350 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~-~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~ 428 (502)
T PRK08276 350 YPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTDRKSDMIIS-GGVNIYPQEIENLLVTHPKVADVAVFGVPDE 428 (502)
T ss_pred ccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEeccCcceEEe-CCEEeCHHHHHHHHHhCCCcceEEEEeCCCc
Confidence 999999999999999977799999999999999999999999999997 8999999999999999999999999987654
Q ss_pred ---CeEEEEEEcCh---------hHHHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccc
Q 005991 583 ---SCLVAIVAVDP---------DVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRS 640 (666)
Q Consensus 583 ---~~~va~vv~~~---------~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~ 640 (666)
+.++++|++.. +++.++++++ ++ .+++|..+++++ +|++.+||++|++|++.
T Consensus 429 ~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~-l~-----~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~ 493 (502)
T PRK08276 429 EMGERVKAVVQPADGADAGDALAAELIAWLRGR-LA-----HYKCPRSIDFEDELPRTPTGKLYKRRLRDR 493 (502)
T ss_pred ccCceEEEEEEECCCCCCChhhHHHHHHHHHhh-cc-----CCCCCcEEEEecCCCCCcccchhHHHHHHH
Confidence 57899998732 2678888887 87 899999999995 88888899999999765
No 112
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.6e-59 Score=519.60 Aligned_cols=469 Identities=20% Similarity=0.258 Sum_probs=376.5
Q ss_pred eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEE
Q 005991 112 KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFC 191 (666)
Q Consensus 112 ~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 191 (666)
+.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++++
T Consensus 10 ~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 10 RRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHHHhhhcCCCceEEEEeCCCCCCC-----CCCCCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccC
Q 005991 192 IPQTLNTLLSFISEIPSVHLIVVVGGKDEHL-----PSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSG 266 (666)
Q Consensus 192 ~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSG 266 (666)
+......+.+.. +....++..+...... ............+|++...... +.....++++++++||||
T Consensus 90 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~i~~TSG 162 (509)
T PRK12406 90 HADLLHGLASAL---PAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE----PYDGPPVPQPQSMIYTSG 162 (509)
T ss_pred ccchhhhhhhhh---hcccceeecccccccccccccccccccCCCCccCHHHHhcccC----ccCCCCCCCceEEEECCC
Confidence 887665544332 1111222222110000 0000001112245655543221 122345789999999999
Q ss_pred CCCCccEEEecHHHH---HHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-CCHHHHHHHHHhh
Q 005991 267 TTGTPKGAVLTHGNL---ISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ-GDNLKLMDDLAVL 342 (666)
Q Consensus 267 TTG~PKgV~~th~~l---~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~i~~~ 342 (666)
|||.||||+++|.+. ..........+++.+++++++.+|++|..+....+.++..|+++++.+ .++..+++.++++
T Consensus 163 tTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~ 242 (509)
T PRK12406 163 TTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDPEELLQLIERH 242 (509)
T ss_pred CCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCHHHHHHHHHHc
Confidence 999999999876553 333333444577889999999999999988877777888999998877 7999999999999
Q ss_pred cCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCC
Q 005991 343 KPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASP 422 (666)
Q Consensus 343 ~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~ 422 (666)
++|.+.++|+++..++....... +..-.+++|.+++||++
T Consensus 243 ~~t~~~~~P~~~~~l~~~~~~~~----------------------------------------~~~~~~~l~~v~~gg~~ 282 (509)
T PRK12406 243 RITHMHMVPTMFIRLLKLPEEVR----------------------------------------AKYDVSSLRHVIHAAAP 282 (509)
T ss_pred CCeEEEccHHHHHHHHhCchhhc----------------------------------------ccCCCCceeEEEEcCCC
Confidence 99999999999988765211000 00001489999999999
Q ss_pred CcHHHHHHHHHHhCCccccCcccchhhhhhhccCCC-CCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCC
Q 005991 423 LSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGP 501 (666)
Q Consensus 423 l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~ 501 (666)
+++++.+++.+.+++.+++.||+||++.+++..... ...++++|.|+++++++++| ++++.++.+. .|||+++|+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~---~Gel~v~~~ 358 (509)
T PRK12406 283 CPADVKRAMIEWWGPVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVD-EDGRPLPQGE---IGEIYSRIA 358 (509)
T ss_pred CCHHHHHHHHHHcCCcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEEC-CCCCCCCCCC---ceEEEEECC
Confidence 999999999998899999999999998765543222 24567899999999999999 5566666655 899999999
Q ss_pred CcCc-cccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeC
Q 005991 502 IVFQ-GYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDS 580 (666)
Q Consensus 502 ~v~~-GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~ 580 (666)
+++. ||+++++.+++.+ .+|||+|||+|++++||.+++.||.||+||+ +|++|+|.+||+.|.++|+|.+|+|++.+
T Consensus 359 ~~~~~~y~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~ 436 (509)
T PRK12406 359 GNPDFTYHNKPEKRAEID-RGGFITSGDVGYLDADGYLFLCDRKRDMVIS-GGVNIYPAEIEAVLHAVPGVHDCAVFGIP 436 (509)
T ss_pred ccccccccCCchhccccc-CCCCeEEccEEEEcCCceEEEeecccceEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeee
Confidence 9875 9999999988776 7999999999999999999999999999996 89999999999999999999999999876
Q ss_pred CC---CeEEEEEEc------ChhHHHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhcc
Q 005991 581 FN---SCLVAIVAV------DPDVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFR 639 (666)
Q Consensus 581 ~~---~~~va~vv~------~~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~ 639 (666)
+. +.++++|++ +.++++++++++ ++ .+++|..+.+++ +|++.+||++|++|++
T Consensus 437 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~-l~-----~~~~P~~i~~~~~iP~t~~GK~~r~~L~~ 499 (509)
T PRK12406 437 DAEFGEALMAVVEPQPGATLDEADIRAQLKAR-LA-----GYKVPKHIEIMAELPREDSGKIFKRRLRD 499 (509)
T ss_pred ccccCceeEEEEEECCCCCCCHHHHHHHHHHh-cc-----cCCCCcEEEEeccCCCCCccchhHHHHHH
Confidence 54 467888875 347888999988 88 899999999885 8888889999999975
No 113
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=7.3e-60 Score=500.61 Aligned_cols=509 Identities=20% Similarity=0.272 Sum_probs=408.7
Q ss_pred HHHHHHHHHHhC-CCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHH
Q 005991 81 LHDNFIYAVENY-PDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACS 159 (666)
Q Consensus 81 l~~~~~~~a~~~-pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~ 159 (666)
-+.++.+..+.. +|.++++++ +...++...+||.|+.+++.++|..|.+.|+++||+|++++|+.+|++++++||.
T Consensus 66 ~~n~~~~~~~~~~~~~~a~~~~---~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~ 142 (626)
T KOG1175|consen 66 CYNCLDRHIKEKGGDKVAIIFE---GNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACA 142 (626)
T ss_pred hHhhhhhhhhhcCCCCcEEEEE---ecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHh
Confidence 344555554444 889999887 3223333448999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccH---------HHHHHhhhcCCC-----ceEEEEeCCCCCCCCCC
Q 005991 160 AYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTL---------NTLLSFISEIPS-----VHLIVVVGGKDEHLPSL 225 (666)
Q Consensus 160 ~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~-----l~~ii~~~~~~~~~~~~ 225 (666)
++|++..++...++++++...+++++++++++.+... ..+.+.+..++. ...+++.+.
T Consensus 143 r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-------- 214 (626)
T KOG1175|consen 143 RIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRR-------- 214 (626)
T ss_pred hcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecc--------
Confidence 9999999999999999999999999999999976432 122222222211 111111111
Q ss_pred CCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHH-HHHHHhhcccccccCCCcEEEEcC
Q 005991 226 PSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGN-LISNVAGFSLMVQFYPSDIYMSYL 304 (666)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~-l~~~~~~~~~~~~~~~~d~~l~~~ 304 (666)
.+...|++.+...... .+....+.+|+.+|+|||||||.|||+.+|+.. ++..+......+.+.++|+++++.
T Consensus 215 -----~~d~~~~~~~~~a~~~-~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~ 288 (626)
T KOG1175|consen 215 -----NRDLFWSLELKKASPE-HPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCAS 288 (626)
T ss_pred -----cccccHHHHhhhcCCC-CCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEec
Confidence 0134566665544432 335667889999999999999999999999876 566666667778999999999999
Q ss_pred ChHHHHHHHH-HHHHHHhCcEEEEec---CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Q 005991 305 PLAHIYERAN-QIVSVYYGVAVGFYQ---GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAY 380 (666)
Q Consensus 305 pl~h~~~~~~-~~~~l~~G~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 380 (666)
.+.++.+.+. .+.+|+.|++++++. +++..+++.+.++++|++++.|+.++.|..........
T Consensus 289 d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~------------- 355 (626)
T KOG1175|consen 289 DLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTS------------- 355 (626)
T ss_pred ccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccc-------------
Confidence 9999999887 556999999999987 48899999999999999999999999876632211100
Q ss_pred HHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCC-ccccCcccchhhhhhhccCCCC
Q 005991 381 NSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGC-QVMEGYGMTETSCIISAIDKGD 459 (666)
Q Consensus 381 ~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~-~v~~~YG~TE~~~~~~~~~~~~ 459 (666)
++ + .+||.+.++|+|+.++..+++.+.++. +|.+.||+||+|+.+....+..
T Consensus 356 ----------------~~----------~-~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~ 408 (626)
T KOG1175|consen 356 ----------------YS----------L-KSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGK 408 (626)
T ss_pred ----------------cc----------c-ceEEEEeecCccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCC
Confidence 00 0 379999999999999999999999987 6999999999999887766655
Q ss_pred --CCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCC---CcCccccCChhhhhhccCC--CCeeecccEEEE
Q 005991 460 --NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGP---IVFQGYYKNEVQTREVIDG--DGWLHTGDIGLW 532 (666)
Q Consensus 460 --~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~---~v~~GY~~~~~~t~~~~~~--~gw~~TGDlg~~ 532 (666)
..+++.|.|.+++.+.|+|. +++...... ..|||+++.+ +.+++||+|++.-..+.-. .|+|.|||.|++
T Consensus 409 ~p~~pg~~~~p~~g~~v~i~de-~g~~~~~~~--~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~r 485 (626)
T KOG1175|consen 409 LPIKPGSAGKPFPGYDVQILDE-NGNELPPST--GNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRR 485 (626)
T ss_pred CCcCccccCCCCCCcceEEECC-CCCCcCCCC--ceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEE
Confidence 88999999999999999994 555555543 4899999973 7899999999944333323 799999999999
Q ss_pred ecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh---------hHHHHHH
Q 005991 533 LPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP---------DVLKDWA 600 (666)
Q Consensus 533 ~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~---------~~l~~~~ 600 (666)
|+||++++.||.||+|++ +|+|+++.|||+++..||.|.|++|+|.+++ +.++|||++.+ .+|+..+
T Consensus 486 d~dGY~~i~GR~DDviNv-sGhRigtaEIE~al~~hp~VaEsAvVg~p~~~~ge~v~aFvvl~~g~~~~~~L~kel~~~V 564 (626)
T KOG1175|consen 486 DEDGYYWILGRVDDVINV-SGHRIGTAEIESALVEHPAVAESAVVGSPDPIKGEVVLAFVVLKSGSHDPEQLTKELVKHV 564 (626)
T ss_pred cCCceEEEEecccccccc-cceeecHHHHHHHHhhCcchhheeeecCCCCCCCeEEEEEEEEcCCCCChHHHHHHHHHHH
Confidence 999999999999999997 7999999999999999999999999998865 78999999854 3566666
Q ss_pred HHcCCCcccccccccCcchhHH-HHHHHHhhhhhhhhhccchhhhhcCCCccceehh
Q 005991 601 ASQGIKVIYCFSFRANSHVIFI-ALIHNLCQLYSSKELFRSRCCYRTGRDSSVFCQE 656 (666)
Q Consensus 601 ~~~~l~~~~~~~~~~p~~i~~v-~~~~~~~gK~~r~~l~~~~~~~~~~~~~~~~~~~ 656 (666)
++. +. ++..|+.|.++ ++|+|.+||+.|+.||+...-.--|..|.+-.++
T Consensus 565 R~~-ig-----p~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~~~~d~st~~dp~ 615 (626)
T KOG1175|consen 565 RSV-IG-----PYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGKAVGDTSTLADPS 615 (626)
T ss_pred Hhh-cC-----cccccceeEecCCCCccccchhHHHHHHHHhccCccccccccCChH
Confidence 666 77 99999999999 6999999999999999984422455555554444
No 114
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=4.6e-59 Score=506.04 Aligned_cols=427 Identities=21% Similarity=0.278 Sum_probs=358.0
Q ss_pred eHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccc
Q 005991 115 TYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQ 194 (666)
Q Consensus 115 Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 194 (666)
||+||.++++++|+.|.+.|+++||+|+|+++|+++++++++||+++|++++|+++.++.+++..++++++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred cHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEE
Q 005991 195 TLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGA 274 (666)
Q Consensus 195 ~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV 274 (666)
..... .. ...+..+................+++++++|||||||.||+|
T Consensus 81 ~~~~~---------~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v 129 (436)
T TIGR01923 81 LEEKD---------FQ----------------------ADSLDRIEAAGRYETSLSASFNMDQIATLMFTSGTTGKPKAV 129 (436)
T ss_pred ccccc---------ee----------------------ecchHhhhhcccccccccccCCcCceEEEEeCCCCCCCCcEE
Confidence 32110 00 001111111111111111234568999999999999999999
Q ss_pred EecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEecCCHHHHHHHHHhhcCeEEeechHHH
Q 005991 275 VLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLY 354 (666)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~ 354 (666)
+++|+++...+......+++.++|++++.+|++|.+++...+.++..|+++++.+.. ..+++.++++++|++.++|+++
T Consensus 130 ~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~-~~~~~~l~~~~~t~~~~~P~~l 208 (436)
T TIGR01923 130 PHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF-NQLLEMIANERVTHISLVPTQL 208 (436)
T ss_pred EEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH-HHHHHHHHHhCCeEEEeHHHHH
Confidence 999999999888888888999999999999999999998888899999999987643 3899999999999999999999
Q ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHH
Q 005991 355 NRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVC 434 (666)
Q Consensus 355 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~ 434 (666)
..+.+.... ..++|.+++||+++++++.++++.
T Consensus 209 ~~l~~~~~~----------------------------------------------~~~l~~~~~~G~~~~~~~~~~~~~- 241 (436)
T TIGR01923 209 NRLLDEGGH----------------------------------------------NENLRKILLGGSAIPAPLIEEAQQ- 241 (436)
T ss_pred HHHHhCcCC----------------------------------------------CCceEEEEECCCCCCHHHHHHHHH-
Confidence 887652000 037999999999999999998876
Q ss_pred hCCccccCcccchhhhhhhccCCCC-CCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhh
Q 005991 435 FGCQVMEGYGMTETSCIISAIDKGD-NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQ 513 (666)
Q Consensus 435 ~~~~v~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~ 513 (666)
+|+.+++.||+||++..++...... ....++|.|++++++++.+.+. + +.|||+++|+.++.||+++++.
T Consensus 242 ~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~------~---~~Gel~v~~~~~~~gy~~~~~~ 312 (436)
T TIGR01923 242 YGLPIYLSYGMTETCSQVTTATPEMLHARPDVGRPLAGREIKIKVDNK------E---GHGEIMVKGANLMKGYLYQGEL 312 (436)
T ss_pred hCCceeeEecCCccchhccCcCccccccccCCCccCCCcEEEEEeCCC------C---CceEEEEECCccchhhCCChhh
Confidence 5999999999999987655443322 2223599999999999954222 1 3799999999999999999988
Q ss_pred hhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEE
Q 005991 514 TREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVA 590 (666)
Q Consensus 514 t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv 590 (666)
+...+ .+|||+|||+|++++||.+++.||.+|+||+ +|++|+|.+||+++.++|.|.+++|++.++. ..++++|+
T Consensus 313 ~~~~~-~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~ 390 (436)
T TIGR01923 313 TPAFE-QQGWFNTGDIGELDGEGFLYVLGRRDDLIIS-GGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIV 390 (436)
T ss_pred hhhhh-cCCCeeccceEEEcCCCCEEEeccccCeEEe-CCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEE
Confidence 87766 6899999999999999999999999999997 8999999999999999999999999987653 46788887
Q ss_pred cC----hhHHHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhh
Q 005991 591 VD----PDVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKEL 637 (666)
Q Consensus 591 ~~----~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l 637 (666)
++ .+.+.+++++. ++ .+++|..+.+++ +|++.+||++|++|
T Consensus 391 ~~~~~~~~~l~~~l~~~-l~-----~~~~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 391 SESDISQAKLIAYLTEK-LA-----KYKVPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred ECCCCCHHHHHHHHHHh-hh-----CCCCCeEEEEecCCCCCCCCceecccC
Confidence 54 56788999988 87 899999999885 88888899999876
No 115
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1e-57 Score=509.52 Aligned_cols=478 Identities=21% Similarity=0.291 Sum_probs=368.6
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
.++.+.+...+..+|+.+++... ++ .+.+||.||+++++++|++|.+.|+++||+|+++++|+++|+++++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~ 74 (545)
T PRK07768 2 SRFTEKMYANARTSPRGMVTGEP---DA----PVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGL 74 (545)
T ss_pred chHHHHHHHHhhCCCcceEEecC---CC----ceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHH
Confidence 46788888999999999988654 32 367999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHH-------HHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCc
Q 005991 159 SAYSYISVPLYDTLGPDAV-------KYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGV 231 (666)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l-------~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~ 231 (666)
+++|++++|+++..+.+++ .++++.++++++++++.....+.... . .+.
T Consensus 75 ~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~-----------------------~~~ 130 (545)
T PRK07768 75 WMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLE-E-----------------------KGI 130 (545)
T ss_pred HHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhc-c-----------------------cCC
Confidence 9999999999998876544 55677889999999875443222110 0 012
Q ss_pred EEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCC-cEEEEcCChHHHH
Q 005991 232 KLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPS-DIYMSYLPLAHIY 310 (666)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~-d~~l~~~pl~h~~ 310 (666)
.+++++++...... ......++++++|+|||||||.||||+++|+++...+......+++..+ |++++.+|++|.+
T Consensus 131 ~~~~~~~l~~~~~~---~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 207 (545)
T PRK07768 131 RVLTVADLLAADPI---DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDM 207 (545)
T ss_pred ceeehhhhcccCCC---CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccch
Confidence 23455555442211 2234567999999999999999999999999999988877777777776 8999999999999
Q ss_pred HHHH-HHHHHHhCcEEEEec-----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 005991 311 ERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKK 384 (666)
Q Consensus 311 ~~~~-~~~~l~~G~~~~~~~-----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~ 384 (666)
++.. .+.++..|+++++.+ .++..+.+.+++++++++.+.|.++..+...+......
T Consensus 208 g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------------- 270 (545)
T PRK07768 208 GMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKP----------------- 270 (545)
T ss_pred HHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccc-----------------
Confidence 9886 456799999998876 27888899999999999988887776654422110000
Q ss_pred HHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHH---hCC---ccccCcccchhhhhhhccCCC
Q 005991 385 QAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVC---FGC---QVMEGYGMTETSCIISAIDKG 458 (666)
Q Consensus 385 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~---~~~---~v~~~YG~TE~~~~~~~~~~~ 458 (666)
..++ .+++|.+++||+++++++.+.+.+. +|. .+++.||+||++..++.....
T Consensus 271 ----------~~~~-----------~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~ 329 (545)
T PRK07768 271 ----------GAFD-----------LSSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCG 329 (545)
T ss_pred ----------cCCC-----------chheeeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCC
Confidence 0000 1479999999999999999988764 554 499999999998655433221
Q ss_pred --------------------------CCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChh
Q 005991 459 --------------------------DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEV 512 (666)
Q Consensus 459 --------------------------~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~ 512 (666)
....+++|+|+++++++|+| ++++.++.++ .|||+++|+.++.||++++.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~~~g~---~Gel~v~~~~~~~gy~~~~~ 405 (545)
T PRK07768 330 AGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVLPPRG---VGVIELRGESVTPGYLTMDG 405 (545)
T ss_pred CCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCCCCCC---EEEEEEccCcccccccCCCC
Confidence 11345799999999999999 6667666554 89999999999999998655
Q ss_pred hhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeC--CC---CeEEE
Q 005991 513 QTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDS--FN---SCLVA 587 (666)
Q Consensus 513 ~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~--~~---~~~va 587 (666)
... .++.+|||+|||+|+++++|.++++||.||+||+ +|++|+|.+||+.+.+||+|.+++|++.+ +. +.++.
T Consensus 406 ~~~-~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~ 483 (545)
T PRK07768 406 FIP-AQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIM-AGRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGFAV 483 (545)
T ss_pred Ccc-cccCCCeeeccceEEEecCCEEEEEccccceEEE-CCEecCHHHHHHHHHhCcccccceEEEEEecCCCCceEEEE
Confidence 443 3447899999999999999999999999999998 89999999999999999999998877532 22 23344
Q ss_pred EEEcC----hh---HHHHHHHHcCCCccccccc-ccCcchhHHH---HHHHHhhhhhhhhhcc
Q 005991 588 IVAVD----PD---VLKDWAASQGIKVIYCFSF-RANSHVIFIA---LIHNLCQLYSSKELFR 639 (666)
Q Consensus 588 ~vv~~----~~---~l~~~~~~~~l~~~~~~~~-~~p~~i~~v~---~~~~~~gK~~r~~l~~ 639 (666)
++.+. +. ++.+++++. +. ..+ ..|..+.+++ +|++.+||++|++|+.
T Consensus 484 ~v~~~~~~~~~~~~~l~~~~~~~-l~----~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~l~~ 541 (545)
T PRK07768 484 AVESNAFEDPAEVRRIRHQVAHE-VV----AEVGVRPRNVVVLGPGSIPKTPSGKLRRANAAE 541 (545)
T ss_pred EEEecccccHHHHHHHHHHHHHH-HH----HHhCCCccEEEEeCCCcCCCCCchhHHHHHHHH
Confidence 44332 12 344555554 32 122 5788887773 7888889999999985
No 116
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=2.5e-58 Score=497.31 Aligned_cols=401 Identities=29% Similarity=0.472 Sum_probs=320.2
Q ss_pred HHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCe
Q 005991 85 FIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYI 164 (666)
Q Consensus 85 ~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~ 164 (666)
|+++|+++||++|+++ ++.+++||+||+++++++|.+|.++|+++|++|+++++|+++++++++||+++|++
T Consensus 1 f~~~a~~~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~ 72 (417)
T PF00501_consen 1 FERQAQRYPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAI 72 (417)
T ss_dssp HHHHHHHSTTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-E
T ss_pred ChhHHhhCCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccc
Confidence 6899999999999976 22467999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHHhcCceEEEE----ccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHH
Q 005991 165 SVPLYDTLGPDAVKYVVNHAEIEAIFC----IPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQ 240 (666)
Q Consensus 165 ~vpl~~~~~~~~l~~~l~~~~~~~vi~----~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (666)
++|+++.++.+++.+++++++++++|+ +......+.+..........++.++....... ......
T Consensus 73 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 141 (417)
T PF00501_consen 73 PVPLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKK-----------EALKSA 141 (417)
T ss_dssp EEEEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTC-----------HHHHHH
T ss_pred ccccccccccccccccccccceeEEEEeccccccccccchhhhcccccccccccccccccccc-----------cccccc
Confidence 999999999999999999999999997 22223334444443344556666653221000 000000
Q ss_pred hcCCCCCCCCCC-CCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcc--cccccCCCcEEEEcCChHHHHHH-HHHH
Q 005991 241 SQGCSSPQPFCP-PKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFS--LMVQFYPSDIYMSYLPLAHIYER-ANQI 316 (666)
Q Consensus 241 ~~~~~~~~~~~~-~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~--~~~~~~~~d~~l~~~pl~h~~~~-~~~~ 316 (666)
....... .+ ..++++++++|||||||.||+|.+||+++++.+..+. ...+++ |++++++|++|.+++ ...+
T Consensus 142 ~~~~~~~---~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~ 216 (417)
T PF00501_consen 142 SLSDEPQ---SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALL 216 (417)
T ss_dssp HHCHCSH---STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHH
T ss_pred ccccccc---cCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeecccccccccccccc
Confidence 0000000 00 0579999999999999999999999999999887754 222333 699999999999999 6688
Q ss_pred HHHHhCcEEEEecCC----HHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCC
Q 005991 317 VSVYYGVAVGFYQGD----NLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT 392 (666)
Q Consensus 317 ~~l~~G~~~~~~~~~----~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~ 392 (666)
.+++.|+++++.+.. +..+++.+++++||+++++|+++..+.+..... ....
T Consensus 217 ~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~-~~~~----------------------- 272 (417)
T PF00501_consen 217 AALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEK-TKIS----------------------- 272 (417)
T ss_dssp HHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTT-HHGT-----------------------
T ss_pred ccccccccccccccccccccccchhccccccccccccccccccccccccccc-cccc-----------------------
Confidence 999999999999832 467899999999999999999999987621110 0000
Q ss_pred CChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCC-ccccCcccchhhhhhhccCCCC--CCCCCccCCc
Q 005991 393 PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGC-QVMEGYGMTETSCIISAIDKGD--NLSGHVGSPN 469 (666)
Q Consensus 393 ~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~-~v~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~ 469 (666)
+..+ +++|.+++||+++++++.+++++.++. ++++.||+||++.+++...... ...+++|.|+
T Consensus 273 -------------~~~l-~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~ 338 (417)
T PF00501_consen 273 -------------KKDL-SSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPL 338 (417)
T ss_dssp -------------TTTG-TT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEES
T ss_pred -------------cccc-ccccccccccccCChhhccccccccccccceecccccccceeeecccccccccccccccccc
Confidence 0001 369999999999999999999999987 9999999999999887553222 4678899999
Q ss_pred cCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEE
Q 005991 470 PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (666)
Q Consensus 470 ~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ik 549 (666)
|+++++|+|.+++++++.++ .|||+|+|+.++.||+++|+.|++.|.++|||+|||+|++|+||+|+++||.||+||
T Consensus 339 ~~~~~~ivd~~~~~~~~~g~---~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR~~~~i~ 415 (417)
T PF00501_consen 339 PGVEVKIVDPNTGEPLPPGE---PGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGRSDDMIK 415 (417)
T ss_dssp TTEEEEEECTTTSSBESTTS---EEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEEGSCEEE
T ss_pred cccccccccccccccccccc---cccccccCCccceeeeccccccccccccccceecceEEEECCCCeEEEEEeeCCEEE
Confidence 99999999976688887765 899999999999999999999999997668999999999999999999999999999
Q ss_pred c
Q 005991 550 L 550 (666)
Q Consensus 550 l 550 (666)
+
T Consensus 416 ~ 416 (417)
T PF00501_consen 416 V 416 (417)
T ss_dssp E
T ss_pred e
Confidence 6
No 117
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.3e-57 Score=484.22 Aligned_cols=389 Identities=16% Similarity=0.183 Sum_probs=335.1
Q ss_pred EEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEc
Q 005991 113 WMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCI 192 (666)
Q Consensus 113 ~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 192 (666)
.+||+||.++++++|+.|. .|+++|++|+++++|+++++++++||+++|++++|+++..+.+++..++++++++.++++
T Consensus 8 ~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~ 86 (414)
T PRK08308 8 EYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLYG 86 (414)
T ss_pred eecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEec
Confidence 5999999999999999985 689999999999999999999999999999999999999999999999999999999987
Q ss_pred cccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCcc
Q 005991 193 PQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPK 272 (666)
Q Consensus 193 ~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK 272 (666)
..... . . ......++++++++|||||||.||
T Consensus 87 ~~~~~---------------~--~--------------------------------~~~~~~~~~~~~i~~TSGtTG~PK 117 (414)
T PRK08308 87 ESDFT---------------K--L--------------------------------EAVNYLAEEPSLLQYSSGTTGEPK 117 (414)
T ss_pred Ccccc---------------c--c--------------------------------cCCCCCCCCceEEEECCCCCCCCc
Confidence 52100 0 0 001235688999999999999999
Q ss_pred EEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHH-HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeec
Q 005991 273 GAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSV 350 (666)
Q Consensus 273 gV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~ 350 (666)
||++||+++.+.+..+...+++..+|+.+..+|++|.+++.. ++.++..|+++++.+ .++..+++.++++++|+++++
T Consensus 118 gv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~ 197 (414)
T PRK08308 118 LIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAV 197 (414)
T ss_pred EEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcC
Confidence 999999999988887777788889999999999999999865 678899999998877 799999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHH
Q 005991 351 PRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDF 430 (666)
Q Consensus 351 P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~ 430 (666)
|+++..+.+.... ..+++.+++||+++++++.++
T Consensus 198 P~~~~~l~~~~~~----------------------------------------------~~~l~~~~~~G~~l~~~~~~~ 231 (414)
T PRK08308 198 PLMLHILGRLLPG----------------------------------------------TFQFHAVMTSGTPLPEAWFYK 231 (414)
T ss_pred HHHHHHHHhcCCc----------------------------------------------cccccEEEEccCCCCHHHHHH
Confidence 9999887652100 026788999999999999999
Q ss_pred HHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCC
Q 005991 431 LKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKN 510 (666)
Q Consensus 431 ~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~ 510 (666)
+++. +.++++.||+||++++.. .......+++|+|+|++++++.+. .+ ..|||++++
T Consensus 232 ~~~~-~~~~~~~YG~tE~~~~~~--~~~~~~~~~~G~p~~~~~~~~~~~-------~~---~~gel~v~~---------- 288 (414)
T PRK08308 232 LRER-TTYMMQQYGCSEAGCVSI--CPDMKSHLDLGNPLPHVSVSAGSD-------EN---APEEIVVKM---------- 288 (414)
T ss_pred HHHh-CChhhhccCccccCCeee--cCCCCCCCccCccCCCeEEEEecC-------CC---CCceEEEEc----------
Confidence 9875 678999999999985433 222345678999999999998752 12 369999975
Q ss_pred hhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEE
Q 005991 511 EVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVA 587 (666)
Q Consensus 511 ~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va 587 (666)
.++||+|||+|++++||+++|+||.||+||+ +|++|+|.|||+++.++|+|.+|+|++.++. +.+++
T Consensus 289 ---------~~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~-~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~ 358 (414)
T PRK08308 289 ---------GDKEIFTKDLGYKSERGTLHFMGRMDDVINV-SGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKA 358 (414)
T ss_pred ---------CCceEECCceEEECCCccEEEecccCCeEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEE
Confidence 3689999999999999999999999999997 8999999999999999999999999987654 57788
Q ss_pred EEEc----ChhHHHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhh
Q 005991 588 IVAV----DPDVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKE 636 (666)
Q Consensus 588 ~vv~----~~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~ 636 (666)
+++. +.++++++++++ ++ .+++|..+.+++ +|++.+||++|+.
T Consensus 359 ~v~~~~~~~~~~l~~~l~~~-l~-----~~~~P~~i~~v~~iP~t~~GKi~r~~ 406 (414)
T PRK08308 359 KVISHEEIDPVQLREWCIQH-LA-----PYQVPHEIESVTEIPKNANGKVSRKL 406 (414)
T ss_pred EEEeCCCCCHHHHHHHHHHh-Cc-----cccCCcEEEEeccCCCCCCcCeehhh
Confidence 8875 457899999998 88 899999999995 8888889999994
No 118
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.9e-54 Score=438.33 Aligned_cols=509 Identities=22% Similarity=0.256 Sum_probs=391.8
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
+..|++++|.++++++|+++|+++. + +.+.+||+|++++++++|+.|+..|++.||.|+++|+|++|++.++|
T Consensus 75 ~~~ti~~~F~~~vrr~p~k~aii~~---~----~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWl 147 (649)
T KOG1179|consen 75 ERRTIAELFLSQVRRQPDKPAIIYE---G----PFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWL 147 (649)
T ss_pred cCCcHHHHHHHHHHhCCCccEEEEe---C----CCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHH
Confidence 4579999999999999999999986 2 24569999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCc-eEEEEeCCCCCCCCCCCCCCCcEEEe
Q 005991 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSV-HLIVVVGGKDEHLPSLPSTSGVKLIS 235 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l-~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (666)
+.+++|++...||+++..+.+.|.|..++++++|++++..+.+.++.+.+... -.+...+..... . .+.+
T Consensus 148 GLaKlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~-------~--g~~~ 218 (649)
T KOG1179|consen 148 GLAKLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVP-------D--GIES 218 (649)
T ss_pred hHHhhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCC-------c--hHHH
Confidence 99999999999999999999999999999999999999888887774433221 122222211100 0 1123
Q ss_pred hHHHHhcCCCCCCC---CCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHH
Q 005991 236 YLQLQSQGCSSPQP---FCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYER 312 (666)
Q Consensus 236 ~~~~~~~~~~~~~~---~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~ 312 (666)
+...++.....+.| ....+-.++++.+|||||||.||++++||.........+...++++++|+++..+|++|..+.
T Consensus 219 L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ 298 (649)
T KOG1179|consen 219 LLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAG 298 (649)
T ss_pred HHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHH
Confidence 33333333322212 223456789999999999999999999999998888777778999999999999999999998
Q ss_pred HH-HHHHHHhCcEEEEec-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcC
Q 005991 313 AN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSG 390 (666)
Q Consensus 313 ~~-~~~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~ 390 (666)
+. +..++..|+|+++-. ++..+++++-.++++|++.-+-.+.+-|++.
T Consensus 299 ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~------------------------------ 348 (649)
T KOG1179|consen 299 ILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQ------------------------------ 348 (649)
T ss_pred HHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcC------------------------------
Confidence 87 667999999999987 9999999999999999998877777776652
Q ss_pred CCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHhCCc-cccCcccchhhhhhhccCCCCCCCCCccCC-
Q 005991 391 QTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQ-VMEGYGMTETSCIISAIDKGDNLSGHVGSP- 468 (666)
Q Consensus 391 ~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~-v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p- 468 (666)
++++ .++ ..++|.++-- .+.+++++.|.++||.. |.+.||+||+....... +.+.|.+|..
T Consensus 349 -p~~~-~er----------~HkVRla~GN--GLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~~N~---d~~vGA~G~~~ 411 (649)
T KOG1179|consen 349 -PPSP-EER----------QHKVRLAYGN--GLRPDIWQQFVKRFGIIKIGEFYGATEGNSNLVNY---DGRVGACGFMS 411 (649)
T ss_pred -CCCh-hhc----------CceEEEEecC--CCCchHHHHHHHHcCCCeEEEEeccccCcceeeee---cCccccccchh
Confidence 1110 111 1478877644 48899999999999876 99999999987644433 3344455442
Q ss_pred -----ccCcEEEEEecCCCC-------CCCCCCCCCccEEEE--eCCCc---CccccCChhhhhhcc------CCCCeee
Q 005991 469 -----NPACEIKLVDVPEMN-------YTSEDQPHPRGEICV--RGPIV---FQGYYKNEVQTREVI------DGDGWLH 525 (666)
Q Consensus 469 -----~~~~~v~ivd~~~~~-------~~~~~~~~~~GEl~v--~g~~v---~~GY~~~~~~t~~~~------~~~gw~~ 525 (666)
+--+++-=+|+++++ .|-..+||+.|.+.- .-..- |.||.+..++|++++ .+|-||.
T Consensus 412 ~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~ 491 (649)
T KOG1179|consen 412 RLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFN 491 (649)
T ss_pred hhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEe
Confidence 112233333444443 344455667785532 22333 899999888888765 4677999
Q ss_pred cccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC----CeEEEEEEcC------hhH
Q 005991 526 TGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN----SCLVAIVAVD------PDV 595 (666)
Q Consensus 526 TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~----~~~va~vv~~------~~~ 595 (666)
|||+-.+|+.|+|||.||..|.+.. .||||+..|||++|....+++|+.|+|..-+ ..-+|.|+.+ -+.
T Consensus 492 tGDlLv~D~~GylYF~DRtGDTFRW-KGENVsTtEVe~~l~~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~~d~~~ 570 (649)
T KOG1179|consen 492 TGDLLVADELGYLYFKDRTGDTFRW-KGENVSTTEVEDVLSALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTTEKDLEK 570 (649)
T ss_pred eCcEEEEecCCcEEEeccCCCceee-cCCcccHHHHHHHHhhhccccceeEEEEecCCccCccceEEEEecCcccchHHH
Confidence 9999999999999999999999997 8999999999999999999999999996432 3456666643 356
Q ss_pred HHHHHHHcCCCcccccccccCcchhHHHHH-HHHhhhhhhhhhccch----h----hhhcCCCccceeh
Q 005991 596 LKDWAASQGIKVIYCFSFRANSHVIFIALI-HNLCQLYSSKELFRSR----C----CYRTGRDSSVFCQ 655 (666)
Q Consensus 596 l~~~~~~~~l~~~~~~~~~~p~~i~~v~~~-~~~~gK~~r~~l~~~~----~----~~~~~~~~~~~~~ 655 (666)
+-.++++. || +|.+|..+.+.+.+ .|.+-|..+.+|.|.- + +|.-+.+-..|.|
T Consensus 571 l~~~l~~~-LP-----~YA~P~FlRl~~~i~~TgTFKl~K~~L~~egf~p~~~~dply~~~~~~~~y~P 633 (649)
T KOG1179|consen 571 LYQHLREN-LP-----SYARPRFLRLQDEIEKTGTFKLQKTELQKEGFNPAIISDPLYYLDNAGKSYVP 633 (649)
T ss_pred HHHHHHhh-Cc-----cccchHHHHHHhhhhcccchhhHHHHHHHccCCccccCCceEEEeccCCcccc
Confidence 67788887 88 99999999999755 5555888888888872 1 5555555555554
No 119
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=2.7e-54 Score=464.48 Aligned_cols=389 Identities=22% Similarity=0.311 Sum_probs=325.3
Q ss_pred eHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEcc
Q 005991 115 TYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIP 193 (666)
Q Consensus 115 Ty~el~~~~~~lA~~L~~-~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 193 (666)
||.||.+.++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++++++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccE
Q 005991 194 QTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKG 273 (666)
Q Consensus 194 ~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKg 273 (666)
.....+..... .++.+... +..................++++++++|||||||.||+
T Consensus 81 ~~~~~~~~~~~------~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~ 137 (408)
T TIGR01733 81 ALASRLAGLVL------PIILVDPL-----------------ELAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPKG 137 (408)
T ss_pred chhhhccccCC------ceEEechh-----------------hhhhcccccccccccCCCCCCCcEEEEEcCCCCCCCCE
Confidence 76554322110 11111110 00000000000011111457899999999999999999
Q ss_pred EEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEecC----CHHHHHHHHHhhcCeEEee
Q 005991 274 AVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQG----DNLKLMDDLAVLKPTIFPS 349 (666)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~ 349 (666)
|.+||+++...+......+.+.++|++++.+|++|.+++...+.++..|+++++++. .+..+.+.++++++|.+.+
T Consensus 138 v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~ 217 (408)
T TIGR01733 138 VVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNL 217 (408)
T ss_pred EEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEe
Confidence 999999999998888878888899999999999999999889999999999998872 3678899999999999999
Q ss_pred chHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHH
Q 005991 350 VPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMD 429 (666)
Q Consensus 350 ~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~ 429 (666)
+|.+++.+.+... ....++|.+++||+++++++.+
T Consensus 218 ~p~~~~~l~~~~~---------------------------------------------~~~~~l~~v~~~g~~~~~~~~~ 252 (408)
T TIGR01733 218 TPSLLALLAAALP---------------------------------------------PALASLRLVILGGEALTPALVD 252 (408)
T ss_pred CHHHHHHHHHhhh---------------------------------------------hcccCceEEEEeCccCCHHHHH
Confidence 9999998876321 0114899999999999999999
Q ss_pred HHHHHhC-CccccCcccchhhhhhhccCCCC---C--CCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCc
Q 005991 430 FLKVCFG-CQVMEGYGMTETSCIISAIDKGD---N--LSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIV 503 (666)
Q Consensus 430 ~~~~~~~-~~v~~~YG~TE~~~~~~~~~~~~---~--~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v 503 (666)
++.+.++ +.+++.||+||++.+++...... . ...++|.|.++++++|+|+ ++..++.++ .|||+++|+.+
T Consensus 253 ~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-~~~~~~~g~---~Gel~v~~~~~ 328 (408)
T TIGR01733 253 RWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLDD-DLRPVPVGV---VGELYIGGPGV 328 (408)
T ss_pred HHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEECC-CCCCCCCCC---ceEEEecCccc
Confidence 9999887 89999999999987665332222 1 1678999999999999994 466666654 89999999999
Q ss_pred CccccCChhhhhhccCCC------C--eeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEE
Q 005991 504 FQGYYKNEVQTREVIDGD------G--WLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCF 575 (666)
Q Consensus 504 ~~GY~~~~~~t~~~~~~~------g--w~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~ 575 (666)
+.||+++++.|.+.|..+ | ||+|||+|++|++|++++.||.||+|++ +|++|+|.+||+++..||.|.+|+
T Consensus 329 ~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~-~G~~v~~~~ie~~l~~~~~v~~~~ 407 (408)
T TIGR01733 329 ARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKI-RGYRIELGEIEAALLRHPGVREAV 407 (408)
T ss_pred cccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEe-CeEEechHHHHHHHhcCcchhhhc
Confidence 999999999999887332 3 9999999999999999999999999997 899999999999999999999987
Q ss_pred E
Q 005991 576 I 576 (666)
Q Consensus 576 V 576 (666)
|
T Consensus 408 v 408 (408)
T TIGR01733 408 V 408 (408)
T ss_pred C
Confidence 6
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.3e-45 Score=414.85 Aligned_cols=454 Identities=19% Similarity=0.173 Sum_probs=364.3
Q ss_pred hHHHhhHHHHhhccccCCcCCCccccCCCCccccccCCCceEEcCCCCCCCcCccccCCCCCCcccccCCCCCCCCCHHH
Q 005991 4 SSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHD 83 (666)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~ 83 (666)
+.+.++|..++.+++.+|...++.+++...... ..+. ....+.+...++++
T Consensus 181 ~~~~~~~~~~l~~~~~~~~~~~~~l~ll~~~e~-----------------------~~~~------~~~~~~~~~~~i~~ 231 (642)
T COG1020 181 ERELRHFLQLLAALADAPRTSLSALPLLLPSER-----------------------EVWN------ALAAPIPLRLTIHL 231 (642)
T ss_pred HHHHHHHHHHHHHHHhCcccCcccCCCCCHHHH-----------------------hhcc------ccccCCCccchHHH
Confidence 567788999999999999877777776553310 0000 00112344578999
Q ss_pred HHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCC
Q 005991 84 NFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSY 163 (666)
Q Consensus 84 ~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~ 163 (666)
+|...+.+.|++.|+... + ..+||+|+..+++++|+.|.+.|+++++.|++++++++++++.++|++++|+
T Consensus 232 ~f~~~a~~~p~~~a~~~~---~------~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~ 302 (642)
T COG1020 232 LFEEQAATTPDAVALVRG---G------QQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGA 302 (642)
T ss_pred HHHHHHHhCCCceeEecC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCC
Confidence 999999999999888643 2 3599999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcC
Q 005991 164 ISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQG 243 (666)
Q Consensus 164 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (666)
.++|+++.++.+++.+++++++++.+++........ ..++. +..+... + ...
T Consensus 303 ~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~----~~~~~----~~~~~~~----------------~----~~~ 354 (642)
T COG1020 303 AYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDD----VGLPG----LALDDAL----------------S----EIP 354 (642)
T ss_pred eEecCCCCChHHHHHHHHhhcCccEEEecccccccc----ccCCc----ccccccc----------------c----cCC
Confidence 999999999999999999999999999983321100 00110 1111100 0 000
Q ss_pred CCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHHHhCc
Q 005991 244 CSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGV 323 (666)
Q Consensus 244 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~ 323 (666)
...+ ......+++.+|++|||||||.||||+++|+++.+.+.+....+.++..|+++...++.++.+....+.++..|+
T Consensus 355 ~~~~-~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~~~f~~l~~G~ 433 (642)
T COG1020 355 DTDP-IPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVFEIFGALLEGA 433 (642)
T ss_pred ccCc-ccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHHHHHHHHhCCC
Confidence 0000 012345689999999999999999999999999998888877789999999999999999999999999999999
Q ss_pred EEEEec----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhH
Q 005991 324 AVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDR 399 (666)
Q Consensus 324 ~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~ 399 (666)
++++.. .++..+.+.+.++++|++..+|.++..+........ ..
T Consensus 434 ~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~--------------------------~~------ 481 (642)
T COG1020 434 RLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPD--------------------------LI------ 481 (642)
T ss_pred EEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhcc--------------------------cc------
Confidence 999877 589999999999999999999999988765300000 00
Q ss_pred HhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh--CCccccCcccchhhhhhhccCCCCCC--CCCccCCccCcEEE
Q 005991 400 LVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF--GCQVMEGYGMTETSCIISAIDKGDNL--SGHVGSPNPACEIK 475 (666)
Q Consensus 400 ~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~--~~~v~~~YG~TE~~~~~~~~~~~~~~--~~~vG~p~~~~~v~ 475 (666)
.-...+|.+++||+.++..+...+.... ...+.+.||+||++............ ..++|+|++|+.++
T Consensus 482 --------~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ 553 (642)
T COG1020 482 --------SPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLY 553 (642)
T ss_pred --------CCcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEE
Confidence 0002489999999999999999887655 46899999999977666554433322 45899999999999
Q ss_pred EEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeee
Q 005991 476 LVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEY 555 (666)
Q Consensus 476 ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~ 555 (666)
|+| +....++.+. .||++|.|.++.+||+++|+.|++.|..+.+|+|||++++++||.+.++||.|+++|+ +|++
T Consensus 554 ild-~~~~~~p~gv---~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki-~g~R 628 (642)
T COG1020 554 ILD-QGLRPLPLGV---PGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQVKI-RGFR 628 (642)
T ss_pred EEC-CCCCcCCCCC---CeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccceeEe-ceEe
Confidence 999 6667777765 7999999999999999999999999955469999999999999999999999999998 8999
Q ss_pred eccHHHHHHHhcCc
Q 005991 556 VAPEKIENVYAKCK 569 (666)
Q Consensus 556 v~p~eIE~~l~~~p 569 (666)
|++.|||..+.++|
T Consensus 629 iel~eie~~l~~~~ 642 (642)
T COG1020 629 IELGEIEAALAEQP 642 (642)
T ss_pred cCcHHHHHHHhcCC
Confidence 99999999998875
No 121
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.7e-46 Score=394.60 Aligned_cols=307 Identities=25% Similarity=0.317 Sum_probs=257.7
Q ss_pred CCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec---
Q 005991 253 PKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--- 329 (666)
Q Consensus 253 ~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--- 329 (666)
..++|+++++|||||||.||||+++|+++.+.+......+ ...++++..+|++|.+++...+.++..|++++++.
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~ 109 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSA 109 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCC
Confidence 4578999999999999999999999999988877654433 35678999999999999988888899999988732
Q ss_pred -CCHHHHHHHHHhhc--CeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHH
Q 005991 330 -GDNLKLMDDLAVLK--PTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIR 406 (666)
Q Consensus 330 -~~~~~~~~~i~~~~--~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~ 406 (666)
+++..+++.+++++ .++...+|..+..+..... ..
T Consensus 110 ~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-----------------------------~~------------- 147 (358)
T PRK07824 110 GFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-----------------------------AT------------- 147 (358)
T ss_pred CcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc-----------------------------cc-------------
Confidence 68999999999998 4666778887765543100 00
Q ss_pred HHhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCccCcEEEEEecCCCCCCC
Q 005991 407 ERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTS 486 (666)
Q Consensus 407 ~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~ivd~~~~~~~~ 486 (666)
....++|.+++||+++++++.+++.+ +++++++.||+||++..+. ..|.|++++++++.|
T Consensus 148 -~~~~~l~~i~~gG~~l~~~~~~~~~~-~~~~v~~~YG~TE~~~~~~----------~~G~~~~g~~v~i~~-------- 207 (358)
T PRK07824 148 -AALAELDAVLVGGGPAPAPVLDAAAA-AGINVVRTYGMSETSGGCV----------YDGVPLDGVRVRVED-------- 207 (358)
T ss_pred -CCcccceEEEECCCCCCHHHHHHHHh-cCCcEEecccCCccCCCcC----------cCceeCCCCEEEecC--------
Confidence 00148999999999999999998876 5999999999999875332 358999999999843
Q ss_pred CCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHh
Q 005991 487 EDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYA 566 (666)
Q Consensus 487 ~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~ 566 (666)
|||+++|+.++.||+++++.+ .|..+|||+|||+|++ ++|.++++||.||+||+ +|++|+|.+||++|.
T Consensus 208 -------Gei~v~g~~~~~gY~~~~~~~--~~~~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~-~G~~v~p~eIE~~l~ 276 (358)
T PRK07824 208 -------GRIALGGPTLAKGYRNPVDPD--PFAEPGWFRTDDLGAL-DDGVLTVLGRADDAIST-GGLTVLPQVVEAALA 276 (358)
T ss_pred -------CEEEEecCccccccCCCcccc--cccCCCceecccEEEE-eCCEEEEEeccCCeEEE-CCEEECHHHHHHHHH
Confidence 999999999999999998754 4556889999999999 89999999999999997 899999999999999
Q ss_pred cCcCcceEEEEEeCCC---CeEEEEEEcC------hhHHHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhh
Q 005991 567 KCKFVLQCFIYGDSFN---SCLVAIVAVD------PDVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKE 636 (666)
Q Consensus 567 ~~p~V~~~~V~g~~~~---~~~va~vv~~------~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~ 636 (666)
+||+|.+|+|++.+++ +.++|+|+++ .++++++++++ ++ .+++|..|.+++ +|++.+||++|++
T Consensus 277 ~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~i~~~~~~~-l~-----~~~~P~~i~~v~~lP~t~~GKi~r~~ 350 (358)
T PRK07824 277 THPAVADCAVFGLPDDRLGQRVVAAVVGDGGPAPTLEALRAHVART-LD-----RTAAPRELHVVDELPRRGIGKVDRRA 350 (358)
T ss_pred hCCCcceEEEEecCCCCCceEEEEEEEeCCCCCcCHHHHHHHHHhh-Cc-----cccCCCEEEEecCCCCCCCccccHHH
Confidence 9999999999997653 5788888753 46789999988 88 999999999995 8888889999999
Q ss_pred hccc
Q 005991 637 LFRS 640 (666)
Q Consensus 637 l~~~ 640 (666)
|++.
T Consensus 351 L~~~ 354 (358)
T PRK07824 351 LVRR 354 (358)
T ss_pred HHHH
Confidence 9763
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=7e-39 Score=336.57 Aligned_cols=278 Identities=19% Similarity=0.181 Sum_probs=221.6
Q ss_pred CCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCC--CcEEEEcCChHHHHHHHH-HHHHHHhCcEEEEec-CC
Q 005991 256 EDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYP--SDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ-GD 331 (666)
Q Consensus 256 ~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~--~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~-~~ 331 (666)
++.++++|||||||.||||++||+++.+.+......+++.. .|++++++|++|.+++.. ++.++..|+++++.+ ++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~ 174 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAP 174 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCC
Confidence 45789999999999999999999999988877766666643 468999999999999765 667888999998876 67
Q ss_pred HHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCC
Q 005991 332 NLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGG 411 (666)
Q Consensus 332 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 411 (666)
+..+++.++.. |+++++|++|..+.+.. . ..+
T Consensus 175 ~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~------------------------------------------~l~ 206 (386)
T TIGR02372 175 ASGIMRHARPG--DLIVGTPFIWEQLADLD----Y------------------------------------------RLP 206 (386)
T ss_pred hHHHHHhhccC--CEEEECcHHHHHHHhhC----c------------------------------------------CCC
Confidence 88888877643 89999999998875520 0 002
Q ss_pred ceEEEEecCCCCcHHHHHHHHHHhCC-ccccCcccchhhhhhhccCCCCCCCCCccCCccCcEEEEEecCCCCCCCCCCC
Q 005991 412 RVRFMGSGASPLSPDVMDFLKVCFGC-QVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQP 490 (666)
Q Consensus 412 ~lr~i~~gG~~l~~~~~~~~~~~~~~-~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~ 490 (666)
+++. ++||+++++++.+.+++. +. .+++.||+||++++++... ++..|.|.|++++++ + ++ .
T Consensus 207 slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i~~~~~-----~~~~~~~~p~~~~~~-~--~~------~- 269 (386)
T TIGR02372 207 GVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGIGLREA-----PDDPFRLLPDLACFA-D--TL------S- 269 (386)
T ss_pred ccee-EecCCCCCHHHHHHHHHh-cccchhheeccccccccccccC-----CCCCcccCCCccccC-C--Cc------c-
Confidence 5665 688999999999999875 64 6999999999987544321 234577888876543 1 10 0
Q ss_pred CCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcC
Q 005991 491 HPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKF 570 (666)
Q Consensus 491 ~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~ 570 (666)
+ .|+ ..|++|||+|+||++|+|+|+||+||+||+ +|++|+|.+||+++.+||+
T Consensus 270 ----~---~g~-------------------~~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~-~G~~V~p~eIE~~l~~~p~ 322 (386)
T TIGR02372 270 ----S---AGL-------------------ARRLDLQDRLAWDKDGGFTILGRKDEILQV-GGVNVSPGHVRDILERNPR 322 (386)
T ss_pred ----C---CCc-------------------cceeecCceEEEcCCCcEEEecccCCEEEE-CCEEEcHHHHHHHHHcCCC
Confidence 0 011 237899999999999999999999999997 8999999999999999999
Q ss_pred cceEEEEEeCCCCeEEEEEEcCh--------hHHHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhh
Q 005991 571 VLQCFIYGDSFNSCLVAIVAVDP--------DVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYS 633 (666)
Q Consensus 571 V~~~~V~g~~~~~~~va~vv~~~--------~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~ 633 (666)
|.+|+|... .+.++|+|++++ ++++++++++ ++ .|++|..+.+++ +|++.+||++
T Consensus 323 V~~~~v~~~--g~~~~a~vv~~~~~~~~~~~~~l~~~~~~~-L~-----~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 323 VRAAAVRLD--GRRLKAFIVVAEDADEAELEIELRATAARH-LP-----APARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred ceEEEEEcC--CceEEEEEEECCCCChHHHHHHHHHHHHHh-CC-----CCCCCcEEEEcccCCCCCCCCcC
Confidence 999999743 467899988642 4778889988 88 999999999995 8888889974
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=2.8e-34 Score=309.30 Aligned_cols=314 Identities=17% Similarity=0.157 Sum_probs=225.5
Q ss_pred CCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhc---ccccccCCCcEEEEcCChHHHHH-HHHHHHHHHhCcEEEEe
Q 005991 253 PKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGF---SLMVQFYPSDIYMSYLPLAHIYE-RANQIVSVYYGVAVGFY 328 (666)
Q Consensus 253 ~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~~-~~~~~~~l~~G~~~~~~ 328 (666)
..++++++++|||||||.||+|.+||.++....... ...+++.++|++++..++.+..+ +...+.++..|++++..
T Consensus 72 ~~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 151 (422)
T TIGR02155 72 VPREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI 151 (422)
T ss_pred CChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec
Confidence 355788999999999999999999999986654332 22357889999988766544322 33345577789998876
Q ss_pred c-CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHH
Q 005991 329 Q-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRE 407 (666)
Q Consensus 329 ~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~ 407 (666)
+ .++..+++.|++++||+++++|+++..|.+..... +..+.
T Consensus 152 ~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~-------------------------~~~~~------------- 193 (422)
T TIGR02155 152 SGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRM-------------------------GIDPA------------- 193 (422)
T ss_pred CCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHc-------------------------CCCcc-------------
Confidence 5 67899999999999999999999999887642211 00000
Q ss_pred HhCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCc--cCcEEEEEecCCCCCC
Q 005991 408 RLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPN--PACEIKLVDVPEMNYT 485 (666)
Q Consensus 408 ~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~--~~~~v~ivd~~~~~~~ 485 (666)
..++|.+++||+++++++.+.+++.||+++++.||+||+++.......... ..|.++ +++.++|+|++++..+
T Consensus 194 --~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~~~~~~~~~~~~~---~~g~~~~~~~~~~eivd~~~g~~v 268 (422)
T TIGR02155 194 --QTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEVIGPGVAMECVET---QDGLHIWEDHFYPEIIDPHTGEVL 268 (422)
T ss_pred --cCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhhcCCceeeccccc---CCCceEecCeeEEEEECCCCCCCC
Confidence 037999999999999999999999999999999999998532111111111 123343 3577889996677777
Q ss_pred CCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecC-C-----cEEEEccCCCeEEcCCeeeeccH
Q 005991 486 SEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPG-G-----RLKIIDRKKNIFKLAQGEYVAPE 559 (666)
Q Consensus 486 ~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~d-G-----~l~i~GR~~d~ikl~~G~~v~p~ 559 (666)
++|+ .|||+++|. +++.| ..+||+|||+|+++++ | .++|.||.||+||+ +|++|+|.
T Consensus 269 ~~Ge---~Gelvvt~~------------~~~~~-p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~-~G~~v~p~ 331 (422)
T TIGR02155 269 PDGE---EGELVFTTL------------TKEAL-PVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLII-RGVNVFPT 331 (422)
T ss_pred CCCC---eeEEEEecC------------Ccccc-ceeeEEcCcEEEEECCCCCcccccccccCccCCeEEE-CCEEECHH
Confidence 6665 899999973 33445 5789999999999876 4 47899999999997 79999999
Q ss_pred HHHHHHhcCcCcc-eEEEEEeCC--CCeEEEEEEcC---------------hhHHHHHHHHcCCCcccccccccCcchhH
Q 005991 560 KIENVYAKCKFVL-QCFIYGDSF--NSCLVAIVAVD---------------PDVLKDWAASQGIKVIYCFSFRANSHVIF 621 (666)
Q Consensus 560 eIE~~l~~~p~V~-~~~V~g~~~--~~~~va~vv~~---------------~~~l~~~~~~~~l~~~~~~~~~~p~~i~~ 621 (666)
+||+++.+||+|. ++.++.... .+.++..|++. .++++++++++ +. .+ ..|.+
T Consensus 332 eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-----~~---~~v~~ 402 (422)
T TIGR02155 332 QLEEVILKMDELSPHYQLELTRNGHMDELTLKVELKPESYTLRLHEQASLLAGEIQHTIKQE-VG-----VS---MDVHL 402 (422)
T ss_pred HHHHHHHhCcCcCCCEEEEEEcCCCccEEEEEEEEecCcccccchHHHHHHHHHHHHHHHhc-cC-----cE---EEEEE
Confidence 9999999999998 444433221 23566655543 23456666665 44 11 22444
Q ss_pred H---HHHHHHhhhhhhhh
Q 005991 622 I---ALIHNLCQLYSSKE 636 (666)
Q Consensus 622 v---~~~~~~~gK~~r~~ 636 (666)
+ ++|++. ||+.|..
T Consensus 403 ~~~~~lp~~~-GK~~~~~ 419 (422)
T TIGR02155 403 VEPGSLPRSE-GKARRVV 419 (422)
T ss_pred ECCCCccCCC-CCceEEE
Confidence 3 356644 9987653
No 124
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=6.2e-31 Score=293.35 Aligned_cols=497 Identities=16% Similarity=0.117 Sum_probs=321.5
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~l 156 (666)
-+.++.+.|.+.+...|.+.+..+.+... ..+.....||++....++.+++.|...|..+|+.|++++..+.++++..+
T Consensus 34 ~~g~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~ 112 (1032)
T KOG1178|consen 34 FMGTLEDSFRRELAEAPENTGHVIIPTAS-ESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVF 112 (1032)
T ss_pred hhcchhhHHHHHHhhcccCCCceEeeccc-ccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeee
Confidence 34577888999999999999988764422 22335568999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCC----HHHHHHH---HHhcCceEEEEccccHHHHHHhhhc-CCCceEEEEeCCCCCCCCCCCCC
Q 005991 157 ACSAYSYISVPLYDTLG----PDAVKYV---VNHAEIEAIFCIPQTLNTLLSFISE-IPSVHLIVVVGGKDEHLPSLPST 228 (666)
Q Consensus 157 A~~~~G~~~vpl~~~~~----~~~l~~~---l~~~~~~~vi~~~~~~~~~~~~~~~-~~~l~~ii~~~~~~~~~~~~~~~ 228 (666)
|++++|..+++++|.++ ++.+..+ +......++ .. .+.+...... .+... +
T Consensus 113 ~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~--~~--l~i~~~~~~~~~~~~s-v---------------- 171 (1032)
T KOG1178|consen 113 AVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIV--RR--LNIIDILLNSLFPKLS-V---------------- 171 (1032)
T ss_pred ehhhcceEEEEecCCCcccccchHHHhhhhhheeccceeh--hh--hhhHHHHhhccccccc-h----------------
Confidence 99999999999999999 3321111 111111110 00 0000000000 00000 0
Q ss_pred CCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCCh-H
Q 005991 229 SGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPL-A 307 (666)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl-~ 307 (666)
... .-.|..+..... .......-+|..+++.||||+||.||||.-+|..+.....++...+.....+++-..... +
T Consensus 172 ~~~-~~~f~~~~~~~~--~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~ 248 (1032)
T KOG1178|consen 172 ETI-ADSFQMVLHNED--TREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYF 248 (1032)
T ss_pred hhc-cchhhhhhccCC--CcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeec
Confidence 000 011111111111 111123456789999999999999999999999999999998888888877776222222 2
Q ss_pred HHHHHHHHHHHHHhCcEEEEec----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Q 005991 308 HIYERANQIVSVYYGVAVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSK 383 (666)
Q Consensus 308 h~~~~~~~~~~l~~G~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k 383 (666)
|+.-.......|+.|..+..+. .++..+.+.+.+++++....+|++.+.++.......... ..+
T Consensus 249 ~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l--------~~~---- 316 (1032)
T KOG1178|consen 249 DDTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLL--------EHA---- 316 (1032)
T ss_pred ccchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhh--------hhh----
Confidence 2222222334555566555443 357899999999999999999999888766322110000 000
Q ss_pred HHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh-CCccccCcccchhhhhhhccCCCCCCC
Q 005991 384 KQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGDNLS 462 (666)
Q Consensus 384 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~~~~ 462 (666)
...+...+ -.+.++...++|++....+...+...+ -.-...-|+.|+..+..+......
T Consensus 317 ---~~~~dl~~--------------~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~--- 376 (1032)
T KOG1178|consen 317 ---FSLSDLLT--------------KRSCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSP--- 376 (1032)
T ss_pred ---hhcccccc--------------cchhheeeeecCCccchhhhhhhhhcccceeeeecccCCCCccceeHHhhCc---
Confidence 00000000 003789999999999999888444433 222333488888776655433221
Q ss_pred CCccCCccCcEEEEEec---------------CCCCCCCCCCCC-CccEEEEeCCCcCccccCChhhhhhcc-----CCC
Q 005991 463 GHVGSPNPACEIKLVDV---------------PEMNYTSEDQPH-PRGEICVRGPIVFQGYYKNEVQTREVI-----DGD 521 (666)
Q Consensus 463 ~~vG~p~~~~~v~ivd~---------------~~~~~~~~~~~~-~~GEl~v~g~~v~~GY~~~~~~t~~~~-----~~~ 521 (666)
.+.-+-...+.++.. ..+.....+..+ ..|+-+..+..+..| ++.++.....+ ..+
T Consensus 377 --s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~d~~~~ 453 (1032)
T KOG1178|consen 377 --SKVLLTNENVYSVPKFDSIIGSLTVLESLYRAGGEGEGGVGKGCLGAEQNLSSWVVDG-YSTPENFLPNFLTVDGVKA 453 (1032)
T ss_pred --ccceecceeEEeccchhhccCCCcceeeeeccCcccCCcccceeecccccccceeecc-ccchhhcCCcccccccchh
Confidence 111111111111110 011111111000 112222223334445 34444443333 245
Q ss_pred CeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcCh-----
Q 005991 522 GWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDP----- 593 (666)
Q Consensus 522 gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~----- 593 (666)
..|||||.|+..++|.+.|.||.|++||+ +|.|+...||+.++..||.|.++++....+. +.++|||++..
T Consensus 454 r~y~tgD~gr~l~ng~l~~~GR~d~qIK~-rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~~ 532 (1032)
T KOG1178|consen 454 RIYRTGDNGRSLKNGGLEISGRADRQIKD-RGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKSV 532 (1032)
T ss_pred hcccccccceeecCCCEEEEEeccceEEE-ccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCch
Confidence 68999999999999999999999999998 8999999999999999999999999875543 57999999742
Q ss_pred --hHHHHHHHHcCCCcccccccccCcchhHH-HHHHHHhhhhhhhhhccc
Q 005991 594 --DVLKDWAASQGIKVIYCFSFRANSHVIFI-ALIHNLCQLYSSKELFRS 640 (666)
Q Consensus 594 --~~l~~~~~~~~l~~~~~~~~~~p~~i~~v-~~~~~~~gK~~r~~l~~~ 640 (666)
..++.|++.. ++ .|++|..++.+ +.|.+.+||+|+++|.+.
T Consensus 533 ~~~~i~~~l~~~-La-----~y~vPs~~V~l~~vPl~~~GKvDkkaL~~~ 576 (1032)
T KOG1178|consen 533 LIRDIRNYLKKE-LA-----SYMLPSLVVPLAKVPLNPNGKVDKKALLEY 576 (1032)
T ss_pred hHHHHHHhhccc-cc-----ceecceEEEEhhhCCcCCCCCcChhhhhhh
Confidence 4688999988 87 99999988888 588999999999999984
No 125
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.97 E-value=2.9e-28 Score=262.87 Aligned_cols=515 Identities=16% Similarity=0.159 Sum_probs=341.3
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCCHhHHHHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFH-GLQKGVRIGLYLINRPEWLIVDHA 157 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~-gv~~gd~V~i~~~n~~e~~~~~lA 157 (666)
.+|.++++..++++||.+|+... ++.......+||++|..++.+++..|+.. -+++||.|+++.+++.|++++++|
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~---n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~ 846 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTL---NARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYA 846 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEe---ccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHH
Confidence 68999999999999999999886 66666678899999999999999999976 589999999999999999999999
Q ss_pred HHhcCCeEEecCCCCC------HHHHHHHHHhcCceEEEEccccHHHHHHhhhc----CCCceEEEEeCCCCCCCCCCCC
Q 005991 158 CSAYSYISVPLYDTLG------PDAVKYVVNHAEIEAIFCIPQTLNTLLSFISE----IPSVHLIVVVGGKDEHLPSLPS 227 (666)
Q Consensus 158 ~~~~G~~~vpl~~~~~------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~----~~~l~~ii~~~~~~~~~~~~~~ 227 (666)
|+.+|.+++|+.|.-. -..+..+++..++.+|+++......+...-.. ...+..++.+++.....
T Consensus 847 Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t~----- 921 (1363)
T KOG3628|consen 847 CLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPETI----- 921 (1363)
T ss_pred HHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccchhh-----
Confidence 9999999999988643 34788999999999999997654443322110 01122222222211000
Q ss_pred CCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChH
Q 005991 228 TSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLA 307 (666)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~ 307 (666)
........+. ..+.+....+++.+|++-+.--++|.--||.++|.++++.+........+.+..-++.+++.+
T Consensus 922 -----~k~~~~~~k~--~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~ 994 (1363)
T KOG3628|consen 922 -----RKRKKNIKKL--NTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPY 994 (1363)
T ss_pred -----hhhhhhhhcc--CCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCc
Confidence 0001111111 112233335678999999998899999999999999999999999988888888888888887
Q ss_pred HHHHHHH-HHHHHHhCcEEEEec-----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Q 005991 308 HIYERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYN 381 (666)
Q Consensus 308 h~~~~~~-~~~~l~~G~~~~~~~-----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 381 (666)
-..|+.. ++...+.|.+..+.+ .++..++..|.++++.-++.+-..++.+..+...+..... .
T Consensus 995 sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~---~-------- 1063 (1363)
T KOG3628|consen 995 SGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLS---K-------- 1063 (1363)
T ss_pred cchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhh---h--------
Confidence 7777765 778899999987766 5999999999999998887777777666553322211110 0
Q ss_pred HHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh---CC---ccccCcccchhhhhhhcc
Q 005991 382 SKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF---GC---QVMEGYGMTETSCIISAI 455 (666)
Q Consensus 382 ~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~---~~---~v~~~YG~TE~~~~~~~~ 455 (666)
.+.. .+...++..-+.....+.+-|.+.+ |. .+--.|+.-=.-.++...
T Consensus 1064 -------~gnn------------------~s~s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~ 1118 (1363)
T KOG3628|consen 1064 -------RGNN------------------TSSSIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRS 1118 (1363)
T ss_pred -------hhcc------------------cccceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhcc
Confidence 0000 0012222222333333333333332 11 122222222111111110
Q ss_pred C---------------------------CCCCCCCCccCCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCcccc
Q 005991 456 D---------------------------KGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYY 508 (666)
Q Consensus 456 ~---------------------------~~~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~ 508 (666)
. +........|...+++++.|+++++..++.+++ .||||+.|..-+.+|+
T Consensus 1119 ~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~IvnPEtk~pc~dge---~GEIW~~S~hnA~~~~ 1195 (1363)
T KOG3628|consen 1119 YSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIVNPETKGPCRDGE---LGEIWVNSAHNASCSF 1195 (1363)
T ss_pred ccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeEEeCCccccccccCC---cceEEecccccccccc
Confidence 0 000111224888899999999998888888776 9999999999998888
Q ss_pred CChhh-hhhcc---------CCCCeeecccEEEEec------CC----cEEEEccCCCeEEcCCeeeeccHHHHHHH-hc
Q 005991 509 KNEVQ-TREVI---------DGDGWLHTGDIGLWLP------GG----RLKIIDRKKNIFKLAQGEYVAPEKIENVY-AK 567 (666)
Q Consensus 509 ~~~~~-t~~~~---------~~~gw~~TGDlg~~~~------dG----~l~i~GR~~d~ikl~~G~~v~p~eIE~~l-~~ 567 (666)
+-.+. ....| .+.+|.||||+|++.. +| -||++|-.++.+.+ +|.+.+|.+||..+ +.
T Consensus 1196 ~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl-~GL~h~p~DIE~TV~~v 1274 (1363)
T KOG3628|consen 1196 TIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDETLEL-NGLRHFPSDIETTVERV 1274 (1363)
T ss_pred ccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeEEEeecccceeee-cCcccCcchHHHHHHHh
Confidence 64221 11122 3456999999999842 22 49999999999998 89999999999999 78
Q ss_pred CcCcceEEEEEeCCCCeEEEEEEcChh-HHHHHHHHcCCCcccccccccCcchhHHH---HHHHHhhhhhhhhhccchhh
Q 005991 568 CKFVLQCFIYGDSFNSCLVAIVAVDPD-VLKDWAASQGIKVIYCFSFRANSHVIFIA---LIHNLCQLYSSKELFRSRCC 643 (666)
Q Consensus 568 ~p~V~~~~V~g~~~~~~~va~vv~~~~-~l~~~~~~~~l~~~~~~~~~~p~~i~~v~---~~~~~~gK~~r~~l~~~~~~ 643 (666)
||.|..|+|+... ..+|.++....+ ++.+..--- +...+.+++-+-..+.||+ +|++..|.-.|..+ +..
T Consensus 1275 H~~I~~cavF~~~--glvVvviE~~gq~~~~~LvPlI-v~~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I---~~~ 1348 (1363)
T KOG3628|consen 1275 HPSIGGCAVFQAT--GLVVVVIECHGQQELADLVPLI-VNVVLEEHYIILDVVAFVDKGVFPRNSRGEKQRAHI---LDS 1348 (1363)
T ss_pred cccccceeeEeeC--CeEEEEEEecCchhHhhhhHHH-HHHHHhhcceEEEEEEEecCCccccCCchhhHHHHH---HHH
Confidence 9999999999774 345555554432 111110000 0011123455566666775 44444332222221 447
Q ss_pred hhcCCCcccee
Q 005991 644 YRTGRDSSVFC 654 (666)
Q Consensus 644 ~~~~~~~~~~~ 654 (666)
|..|+...+|+
T Consensus 1349 w~~~kL~~~~v 1359 (1363)
T KOG3628|consen 1349 WLAGKLDPIYV 1359 (1363)
T ss_pred HHhcccceeee
Confidence 88888777653
No 126
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.95 E-value=6.6e-26 Score=220.70 Aligned_cols=222 Identities=13% Similarity=0.039 Sum_probs=165.3
Q ss_pred HHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCHhHHHHHHHHHhcCC
Q 005991 85 FIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINRPEWLIVDHACSAYSY 163 (666)
Q Consensus 85 ~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~-~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~ 163 (666)
+...++++|+++|+++. +...++.+.+||+||.++++++|++|++ +|+++||+|+|+++|+++++++++||+++|+
T Consensus 2 ~~~~~~~~p~~~al~~~---~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~ 78 (227)
T TIGR03089 2 LSPLLAADPASPRLTFY---DDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGV 78 (227)
T ss_pred hhhhhhhCCCCcEEEEE---cCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence 46778899999999754 2211123569999999999999999998 7999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCC-CCCCCCCCCCCcEEEehHHHHhc
Q 005991 164 ISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKD-EHLPSLPSTSGVKLISYLQLQSQ 242 (666)
Q Consensus 164 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 242 (666)
+++|++ ++++++++++++..+.+. .+ +.++.+.... .......... ...+|.+....
T Consensus 79 v~vp~n-------------~s~a~~~v~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 136 (227)
T TIGR03089 79 EVVLAG-------------DPDADVVVTGPDRLAAAA-----GS--GEVVALSLDPLGRRVAGELPP--GVIDFAPEVRV 136 (227)
T ss_pred EEEeCC-------------CCCCCEEEeCcchhhhcc-----cC--CceEEEeccccccCCCCCCCC--cccchhhhhhc
Confidence 999995 789999999987766532 12 2223321100 0000000011 12466665543
Q ss_pred CCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccccccCCCcEEEEcCChHHHHHHHH-HHHHHHh
Q 005991 243 GCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-QIVSVYY 321 (666)
Q Consensus 243 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~ 321 (666)
......+.....++|++.|+||||+ +|++++... ...++.++|+++ .+|++|.+|+.. ++.+++.
T Consensus 137 ~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~ 202 (227)
T TIGR03089 137 HGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAA 202 (227)
T ss_pred cCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhcc
Confidence 2222222213567999999999986 666765554 446788999999 999999999876 7789999
Q ss_pred CcEEEEec-CCHHHHHHHHHhhcCe
Q 005991 322 GVAVGFYQ-GDNLKLMDDLAVLKPT 345 (666)
Q Consensus 322 G~~~~~~~-~~~~~~~~~i~~~~~t 345 (666)
|+++++++ +++..+++.|+++|+|
T Consensus 203 G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 203 GGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred CceEEEecCCCHHHHHHHHHhhcCC
Confidence 99999988 9999999999999987
No 127
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.94 E-value=1.3e-25 Score=242.07 Aligned_cols=258 Identities=17% Similarity=0.188 Sum_probs=187.0
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHH-HHHHHHhCcEEEEec
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~ 329 (666)
..++++.+.|||||||.||+|.+||.++.......... .++.++|+++...|+.+..+... .+.++..|++++. .
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~-~ 162 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIP-E 162 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEc-C
Confidence 45788999999999999999999999987665544332 47889999999998887665544 4556778887653 3
Q ss_pred CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHh
Q 005991 330 GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERL 409 (666)
Q Consensus 330 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~ 409 (666)
+.....++.|+.+++|.++++|+.+..|.+..... +..+.
T Consensus 163 ~~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~-------------------------g~~~~--------------- 202 (445)
T TIGR03335 163 GKCTFPIRIIESYRPTGIVASVFKLLRLARRMKAE-------------------------GIDPA--------------- 202 (445)
T ss_pred CchhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHc-------------------------CCCcc---------------
Confidence 34456788999999999999999887776532211 00000
Q ss_pred CCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCc--cCcEEEEEecCCCCCCCC
Q 005991 410 GGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPN--PACEIKLVDVPEMNYTSE 487 (666)
Q Consensus 410 ~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~--~~~~v~ivd~~~~~~~~~ 487 (666)
..++|.+++||+++++++.+.+.+.+|+++++.||+||++.. ..+.. ..|..+ +.+.+.|+|++++.++++
T Consensus 203 ~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE~~~~-~~c~~------~~g~h~~~d~~~vEIvDp~~~~~vp~ 275 (445)
T TIGR03335 203 ESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTEGTMC-GECQA------VAGLHVPEDLVHLDVYDPRHQRFLPD 275 (445)
T ss_pred cCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhhhhhe-EEecC------CCCccccCCceEEEEEcCCCCCCCcC
Confidence 037999999999999999999999899999999999998632 21111 123333 457899999665555666
Q ss_pred CCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEec-C----C----cEEEEccCCCeEEcCCeeeecc
Q 005991 488 DQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLP-G----G----RLKIIDRKKNIFKLAQGEYVAP 558 (666)
Q Consensus 488 ~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~-d----G----~l~i~GR~~d~ikl~~G~~v~p 558 (666)
|+ .|||++++-.... +.+.+ +=--|+|||++++.. + | .+..+||.||++++ +|.+|+|
T Consensus 276 Ge---~GELvvT~L~~~~--------~r~~~-PliRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~-~g~~~~p 342 (445)
T TIGR03335 276 GE---CGRIVLTTLLKPG--------ERCGS-LLINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWI-SGVPFNR 342 (445)
T ss_pred CC---ceEEEEEecCCCC--------ccCCc-eEEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEE-CCEEeCH
Confidence 65 8999998753210 00000 111299999999732 2 3 15557999999999 8999999
Q ss_pred HHHHHHHhcC---cCcc
Q 005991 559 EKIENVYAKC---KFVL 572 (666)
Q Consensus 559 ~eIE~~l~~~---p~V~ 572 (666)
.+||++|.++ +++.
T Consensus 343 ~~ie~~l~~~~~~~~~~ 359 (445)
T TIGR03335 343 VDVERAVFQRENMDSLT 359 (445)
T ss_pred HHHHHHHhccCCCCCCC
Confidence 9999999985 5553
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.91 E-value=5e-23 Score=210.50 Aligned_cols=279 Identities=21% Similarity=0.203 Sum_probs=205.7
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChH-HHHHHHHHHHHHHhCcEEEEec
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLA-HIYERANQIVSVYYGVAVGFYQ 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~-h~~~~~~~~~~l~~G~~~~~~~ 329 (666)
.-++...|--||||||+|+-+.+|+..+......+.+. .+...+|++..+.-.. +..|+...+++--.|++++-..
T Consensus 88 ~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~ 167 (438)
T COG1541 88 PKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPIS 167 (438)
T ss_pred cccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccC
Confidence 44667778899999999999999999877666555544 5677888876654311 1222333444555677665444
Q ss_pred -CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHH
Q 005991 330 -GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRER 408 (666)
Q Consensus 330 -~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~ 408 (666)
++...-++.++.++||++.++|+.+..|.+.+.... ..+..
T Consensus 168 ~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G-------------------------~~~~~------------- 209 (438)
T COG1541 168 GGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEG-------------------------IDPDK------------- 209 (438)
T ss_pred CccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcC-------------------------CChhh-------------
Confidence 689999999999999999999999999988654331 01100
Q ss_pred hCCceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCccCcEEEEEecCCCCCCCCC
Q 005991 409 LGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSED 488 (666)
Q Consensus 409 ~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~ 488 (666)
.++|.+++|+|+++++..+.+.+.||+..++.||+||..+.. .........-+ -.-++.-+.|+|+++++++++|
T Consensus 210 --~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE~~g~g-~~eC~~~~glh--i~eD~~~~Ei~dP~t~e~l~dg 284 (438)
T COG1541 210 --LSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTEGFGPG-AGECTERNGLH--IWEDHFIFEIVDPETGEQLPDG 284 (438)
T ss_pred --cceeEEEEecccCCHHHHHHHHHHhCCceeeccccccccCCc-ccccccccCCC--cchhhceeeeecCCcCccCCCC
Confidence 389999999999999999999999999999999999997663 11111111111 1235678899999999999888
Q ss_pred CCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecC----Cc-----EEEEccCCCeEEcCCeeeeccH
Q 005991 489 QPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPG----GR-----LKIIDRKKNIFKLAQGEYVAPE 559 (666)
Q Consensus 489 ~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~d----G~-----l~i~GR~~d~ikl~~G~~v~p~ 559 (666)
. .|||.++.-. ++.+ +---|+|||++.+.++ |. -.|.||.||++++ .|.+|+|.
T Consensus 285 e---~GelV~T~L~------------~~~~-PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~-~G~~vfp~ 347 (438)
T COG1541 285 E---RGELVITTLT------------KEGM-PLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIV-RGVNVFPS 347 (438)
T ss_pred C---eeEEEEEecc------------ccCc-ceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEE-CCEEeCHH
Confidence 6 8999997643 1111 1123999999999874 32 5799999999998 79999999
Q ss_pred HHHHHHhcCcCcc---eEEEEEeCCCCeEEEEEEcC
Q 005991 560 KIENVYAKCKFVL---QCFIYGDSFNSCLVAIVAVD 592 (666)
Q Consensus 560 eIE~~l~~~p~V~---~~~V~g~~~~~~~va~vv~~ 592 (666)
.||.+|.+.+.+. ++++........+..-|+..
T Consensus 348 ~ie~~l~~~~~~~~~yqi~~~~~~~~d~L~V~vE~~ 383 (438)
T COG1541 348 QIERVLLQIPEVTPHYQIILTRNGGLDELTVRVELE 383 (438)
T ss_pred HHHHHHhcccCCCceEEEEEecCCCCceEEEEEEec
Confidence 9999999999999 66666633345666666654
No 129
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=5.9e-19 Score=181.61 Aligned_cols=108 Identities=21% Similarity=0.155 Sum_probs=98.2
Q ss_pred CCCeeecccEEEE-ecCCcEEEEccCCCeEEcCCe---eeeccHHHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEc-
Q 005991 520 GDGWLHTGDIGLW-LPGGRLKIIDRKKNIFKLAQG---EYVAPEKIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAV- 591 (666)
Q Consensus 520 ~~gw~~TGDlg~~-~~dG~l~i~GR~~d~ikl~~G---~~v~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~- 591 (666)
.||||+|||+|++ |+||+|+|+||.| +| ++|+|. ||++|.+||+|.+|+|+|.+++ +.++|+|++
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~------~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~ 279 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG------TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAE 279 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc------CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEEC
Confidence 7899999999998 6999999999997 57 899999 9999999999999999998764 679999985
Q ss_pred ---ChhHHHHHHHHcCCCcccccccccCcchhHHH-HHHHHhhhhhhhhhccch
Q 005991 592 ---DPDVLKDWAASQGIKVIYCFSFRANSHVIFIA-LIHNLCQLYSSKELFRSR 641 (666)
Q Consensus 592 ---~~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v~-~~~~~~gK~~r~~l~~~~ 641 (666)
+.+++++||+++ |+ . ++|+.+.+++ +|.+.+||++|++|+...
T Consensus 280 ~~~~~~el~~~l~~~-L~-----~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~ 326 (365)
T PRK09188 280 LPADEKSLRARLAGA-KP-----P-KPPEHIQPVAALPRDADGTVRDDILRLIA 326 (365)
T ss_pred CCCCHHHHHHHHHhh-ch-----h-cCCcEEEEECCCCCCCCCCccHHHHHHHh
Confidence 457899999999 98 8 9999999995 889999999999998864
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.71 E-value=9e-16 Score=167.20 Aligned_cols=441 Identities=14% Similarity=0.124 Sum_probs=291.7
Q ss_pred CCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHH-HHHhCCCCCCCEEEEEcCCC--HhHHH
Q 005991 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGS-GLLFHGLQKGVRIGLYLINR--PEWLI 153 (666)
Q Consensus 77 ~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~-~L~~~gv~~gd~V~i~~~n~--~e~~~ 153 (666)
.+..+..+++.+-.+++..+|.++- |.+.. ...+||..+..++.++|+ .|-+-|+.++|+|.++...+ .|+++
T Consensus 92 a~~d~~avl~~~~nhs~~~ta~i~i---d~kgk-~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~i 167 (1363)
T KOG3628|consen 92 ALTDIIAVLRYRRNHSATSTAHICI---DKKGK-ATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLI 167 (1363)
T ss_pred hhcchHHHHHhhccCCCCCceEEEE---cCCCc-eeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhh
Confidence 4566778888888899999999887 65533 788999999999999999 77777999999999998876 79999
Q ss_pred HHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcE-
Q 005991 154 VDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVK- 232 (666)
Q Consensus 154 ~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~- 232 (666)
..++|..+|.+.+|+.+..+.+++..+++....+++++..................+.+ .+......+
T Consensus 168 sl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~v-----------~~w~t~~~k~ 236 (1363)
T KOG3628|consen 168 SLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLAKAV-----------AWWKTNDFKG 236 (1363)
T ss_pred hhccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHHHHH-----------Hhhhcccccc
Confidence 99999999999999999999999999999999999998765544332221000000000 000000000
Q ss_pred EEehHHHHhcCCCCCCCCCCCCCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccc--------------------cc
Q 005991 233 LISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL--------------------MV 292 (666)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~--------------------~~ 292 (666)
.+.++.. ..+..... ..+|-||++++|+--||+.+|+ ++.+.+.+.. .+
T Consensus 237 ~~~~~k~---------~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~ 305 (1363)
T KOG3628|consen 237 NYTKDKI---------KKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVF 305 (1363)
T ss_pred eeehhhc---------cCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhcc
Confidence 1111110 11111222 8999999999999999999998 5544433211 13
Q ss_pred ccCCCcEEEEcCChHHHHHHHH-HHHHHHhCcEEEEec----CCHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhh
Q 005991 293 QFYPSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKA 367 (666)
Q Consensus 293 ~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 367 (666)
+....++++..+......|+.+ ++.+++.|.+....+ ..|..+.+.+.++|.+++..--..+......+.+.
T Consensus 306 ~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~--- 382 (1363)
T KOG3628|consen 306 PVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQED--- 382 (1363)
T ss_pred ccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCC---
Confidence 4456677787777777777776 778999999988776 46777888888999988765544443332221110
Q ss_pred cchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhCCceEEEEecCCCCcHHHHHHHHHHh----CCc-c---
Q 005991 368 SGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF----GCQ-V--- 439 (666)
Q Consensus 368 ~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~----~~~-v--- 439 (666)
|. ..+.|.+-+.--.+++|.+++.-..+..+..+...+++ |.. +
T Consensus 383 -------------------------p~---a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~ 434 (1363)
T KOG3628|consen 383 -------------------------PK---ATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVV 434 (1363)
T ss_pred -------------------------cc---cccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCccee
Confidence 00 00011111111226899999999999988766554433 221 1
Q ss_pred --------------ccCcccchhhhhhhccCCCC------------------------------CCCCCccCCccC-cEE
Q 005991 440 --------------MEGYGMTETSCIISAIDKGD------------------------------NLSGHVGSPNPA-CEI 474 (666)
Q Consensus 440 --------------~~~YG~TE~~~~~~~~~~~~------------------------------~~~~~vG~p~~~-~~v 474 (666)
+..=+++|.+...-..+... .....+|...|+ +.+
T Consensus 435 ~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~ 514 (1363)
T KOG3628|consen 435 DFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATL 514 (1363)
T ss_pred echhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEE
Confidence 11122345443322221100 011235666665 567
Q ss_pred EEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhcc------------CCCCeeecccEEEEecCCcEEEEc
Q 005991 475 KLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVI------------DGDGWLHTGDIGLWLPGGRLKIID 542 (666)
Q Consensus 475 ~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~------------~~~gw~~TGDlg~~~~dG~l~i~G 542 (666)
.+++++....+..++ +|||||.++++..+||.-+..|...| ....|.|||-+|++. +|.++++|
T Consensus 515 ~vv~~~t~~LC~~~e---VGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~-~gki~vl~ 590 (1363)
T KOG3628|consen 515 AVVNPDTNQLCKTDE---VGEIWVSSNSLGKLFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVH-NGKIYVLG 590 (1363)
T ss_pred EEeCCCcccccccCc---ceeEEEecCCcccceeeccccccceEEeeeccccCCCCccchhhhhcceeeee-CCeEEEEE
Confidence 777766666665554 99999999999999999888887777 123489999999995 56677777
Q ss_pred cCCCeEEcCCeeeeccHH----------HHHHHhcCcCcceEEEEE
Q 005991 543 RKKNIFKLAQGEYVAPEK----------IENVYAKCKFVLQCFIYG 578 (666)
Q Consensus 543 R~~d~ikl~~G~~v~p~e----------IE~~l~~~p~V~~~~V~g 578 (666)
-++|++.--.|.+.+..+ |+.+++..+.|-++.++-
T Consensus 591 ~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF~~saf~ 636 (1363)
T KOG3628|consen 591 LKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVFDVSAFE 636 (1363)
T ss_pred echhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEEEEeeee
Confidence 666665433576665443 456667778888888887
No 131
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.67 E-value=5.8e-15 Score=155.75 Aligned_cols=256 Identities=18% Similarity=0.205 Sum_probs=159.4
Q ss_pred cEEEEeccCCCCCccEEEecHHHHHHHHhhc-cc--ccccCCCcEEEEcCCh-HHHHHHHHHHHHHHh-CcEEEEec--C
Q 005991 258 IATICYTSGTTGTPKGAVLTHGNLISNVAGF-SL--MVQFYPSDIYMSYLPL-AHIYERANQIVSVYY-GVAVGFYQ--G 330 (666)
Q Consensus 258 ~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~-~~--~~~~~~~d~~l~~~pl-~h~~~~~~~~~~l~~-G~~~~~~~--~ 330 (666)
-..+..||||||.|-.+..+........... .. ..++..++++...+.- .+.+. .+.. ...+.+++ .
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~~ly~------~~~~~~~~~~~~~l~~ 174 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADNNLYQ------SVNNRWISLDFFDLLA 174 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccChhHHH------HHHhccceeeecCCCc
Confidence 3456779999999999999988654332221 11 1245555655544211 12111 1111 11133333 5
Q ss_pred CHHHHHHHHHhhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhhhHHhhHHHHHHhC
Q 005991 331 DNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLG 410 (666)
Q Consensus 331 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~~ 410 (666)
+....++.|++++|+++.+.|+.+..|++.+.+... .
T Consensus 175 ~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l-------------------------------------------~ 211 (430)
T TIGR02304 175 PFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGEL-------------------------------------------T 211 (430)
T ss_pred CHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCC-------------------------------------------C
Confidence 788899999999999999999999998875332100 0
Q ss_pred CceEEEEecCCCCcHHHHHHHHHHhCCccccCcccchhhhhhhccCCCCCCCCCccCCccCcEEEEEecCCCCCCCCCCC
Q 005991 411 GRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQP 490 (666)
Q Consensus 411 ~~lr~i~~gG~~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~ivd~~~~~~~~~~~~ 490 (666)
..++.++++||+++++..+.+++.||+++++.||+|| +.+++.+..+. -++-...--+|..++|+ ++
T Consensus 212 ~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~la~eC~~g~---lHl~ed~~~vE~~ivD~-~~-------- 278 (430)
T TIGR02304 212 IKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFLASTCRCGT---LHLNEDLVHIEKQYLDE-HK-------- 278 (430)
T ss_pred CCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hheEEecCCCC---EEEccccEEEEeeEECC-CC--------
Confidence 2689999999999999999999999999999999999 44332221111 11111111233336662 21
Q ss_pred CCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecC----Cc----E-EEEccCCCeEEc--CCeee--ec
Q 005991 491 HPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPG----GR----L-KIIDRKKNIFKL--AQGEY--VA 557 (666)
Q Consensus 491 ~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~d----G~----l-~i~GR~~d~ikl--~~G~~--v~ 557 (666)
.++.+|++ +.|. .+ +=--|+|||++.+.++ |. | .|.||.+|++++ .+|.. |+
T Consensus 279 --~~~~ViT~------L~n~------~~-PlIRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~ 343 (430)
T TIGR02304 279 --RFVPIITD------FTRT------TQ-PIVRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVF 343 (430)
T ss_pred --ceEEEEec------CCCc------cc-eEEeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeC
Confidence 13344433 2221 11 1113999999988544 32 4 489999999985 34544 59
Q ss_pred cHHHHHHH-hcCcCcceEEEEEeCCCCeEEEEEEc
Q 005991 558 PEKIENVY-AKCKFVLQCFIYGDSFNSCLVAIVAV 591 (666)
Q Consensus 558 p~eIE~~l-~~~p~V~~~~V~g~~~~~~~va~vv~ 591 (666)
|..+++++ ...++|.+..++... ...+...+++
T Consensus 344 p~~~~~~i~~~~~~i~~yQi~Q~~-~~~l~v~~~~ 377 (430)
T TIGR02304 344 PDFIRRVILFTLPLIVEYRVLQTG-SAQLELIADC 377 (430)
T ss_pred HHHHHHHHHhcCCCCceEEEEEcc-CCeEEEEEEe
Confidence 99999885 568899998888665 3344444444
No 132
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.87 E-value=1.6e-07 Score=97.37 Aligned_cols=231 Identities=17% Similarity=0.221 Sum_probs=134.6
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc----cccCC-CcEEEEcCChHHH---HH-H-HHHHHHHHhCc
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM----VQFYP-SDIYMSYLPLAHI---YE-R-ANQIVSVYYGV 323 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~----~~~~~-~d~~l~~~pl~h~---~~-~-~~~~~~l~~G~ 323 (666)
.++++..++-||||||.|--+.+.+..+......+... .+... .-.++...|-... ++ . ...+..+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 34567788889999999866666666655544333222 12211 1233333343211 11 1 11222334555
Q ss_pred EEEEec--CCHHHHHHHHH----hhcCeEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCChhh
Q 005991 324 AVGFYQ--GDNLKLMDDLA----VLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMW 397 (666)
Q Consensus 324 ~~~~~~--~~~~~~~~~i~----~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~ 397 (666)
...+-. .+...+++.+. ..+|..+++.|.++..++..+.+....
T Consensus 167 ~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~------------------------------ 216 (365)
T PF04443_consen 167 RFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIR------------------------------ 216 (365)
T ss_pred eeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCc------------------------------
Confidence 533322 36666666554 567899999999877665533222100
Q ss_pred hHHhhHHHHHHhCCceEEEEecC------CCCcH-HHHHHHHHHhCC----ccccCcccchhhhhhhccCCCCCCCCCcc
Q 005991 398 DRLVFNKIRERLGGRVRFMGSGA------SPLSP-DVMDFLKVCFGC----QVMEGYGMTETSCIISAIDKGDNLSGHVG 466 (666)
Q Consensus 398 d~~~~~~~~~~~~~~lr~i~~gG------~~l~~-~~~~~~~~~~~~----~v~~~YG~TE~~~~~~~~~~~~~~~~~vG 466 (666)
-.+.+..+.+-.|| +.+++ ++.+.+++.||+ .+++.||+||.....+-.... .
T Consensus 217 ---------~~L~~~s~vi~~GGwK~~~~e~v~r~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~-----~-- 280 (365)
T PF04443_consen 217 ---------FRLPKGSIVIHGGGWKGRRKEAVSREEFYARLQEVFGVIPIENIYDMYGMTELNSQAYECGHG-----H-- 280 (365)
T ss_pred ---------ccCCCCCEEEeCCCCCccccCccCHHHHHHHHHHHHCCCCHHHeeeeeeccccchhheeCCCC-----c--
Confidence 00112455666665 55764 566778888998 689999999976543332111 1
Q ss_pred CCccCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecC--------CcE
Q 005991 467 SPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPG--------GRL 538 (666)
Q Consensus 467 ~p~~~~~v~ivd~~~~~~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~d--------G~l 538 (666)
.+.|.. +.|.|+.+..+++.|+ .|-|-+-.+... . .-+..-|.|+|.+..+ .++
T Consensus 281 ~~~p~w-V~iRDp~tl~~~~~Ge---~Gli~vidl~~~-s-------------~p~~IlTeDlGvl~~~~~c~cr~g~~f 342 (365)
T PF04443_consen 281 FHVPPW-VIIRDPETLEPLPPGE---TGLIQVIDLANT-S-------------YPGFILTEDLGVLHGDDDCGCRKGKYF 342 (365)
T ss_pred ccCCCe-EEEECCCCCcCCCCCC---eeEEEEEccccc-C-------------CCcEEEEcceeeecCCCCCCCccCCEE
Confidence 122333 7778988877777766 888887766432 1 1244679999988654 279
Q ss_pred EEEccCCCeE
Q 005991 539 KIIDRKKNIF 548 (666)
Q Consensus 539 ~i~GR~~d~i 548 (666)
.++||.+.-=
T Consensus 343 ~vlGR~~~ae 352 (365)
T PF04443_consen 343 EVLGRADGAE 352 (365)
T ss_pred EEEeCCCCCc
Confidence 9999987543
No 133
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=98.79 E-value=1.2e-09 Score=85.82 Aligned_cols=66 Identities=20% Similarity=0.273 Sum_probs=56.0
Q ss_pred HHHHHHhcCcCcceEEEEEeCCC---CeEEEEEEcChhHHHHHHHHcCCCcccccccccCcchhHH---H-HHHHHhhh
Q 005991 560 KIENVYAKCKFVLQCFIYGDSFN---SCLVAIVAVDPDVLKDWAASQGIKVIYCFSFRANSHVIFI---A-LIHNLCQL 631 (666)
Q Consensus 560 eIE~~l~~~p~V~~~~V~g~~~~---~~~va~vv~~~~~l~~~~~~~~l~~~~~~~~~~p~~i~~v---~-~~~~~~gK 631 (666)
|||+++.+||+|.+|+|++.++. +.++|+|+++.+++++|++++ |+ .|++|+.+.++ + +|++.+||
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~~~~~i~~~~~~~-l~-----~~~~P~~~~~v~~~~~lP~t~~GK 73 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVLDEEEIRDHLRDK-LP-----PYMVPRRIRFVRLDEELPRTPSGK 73 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEEHHHHHHHHHHHH-S------GGGS-SEEEEEEESSSEEBETTSS
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEeeecccccchhhh-CC-----CcceeeEEEEccccCcCCCCCCCC
Confidence 79999999999999999997754 689999999778999999999 98 99999655555 5 88888887
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.26 E-value=2.4e-05 Score=86.03 Aligned_cols=158 Identities=16% Similarity=0.176 Sum_probs=84.5
Q ss_pred CceEEEEecCCCCcHHHHHHHHHHhCC-c-cccCcccchhhhhhhccCCCCCCCCCccCCccC-cEEEEEecCCCC----
Q 005991 411 GRVRFMGSGASPLSPDVMDFLKVCFGC-Q-VMEGYGMTETSCIISAIDKGDNLSGHVGSPNPA-CEIKLVDVPEMN---- 483 (666)
Q Consensus 411 ~~lr~i~~gG~~l~~~~~~~~~~~~~~-~-v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~-~~v~ivd~~~~~---- 483 (666)
++++++.+-+..-.....+.+++.+|- + +..+|++||+.. ..... .... .+.+.++ .-+..++.++.+
T Consensus 267 P~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~i--~i~~~-~~~~--~~~l~~~~~ffEFip~~~~~~~~~ 341 (528)
T PF03321_consen 267 PNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGFI--GIPLD-PEDP--GYVLAPDSGFFEFIPVDEDEQNPS 341 (528)
T ss_dssp TT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEEE--EEES--CCC----EEE-TTSSEEEEEE-STT-----
T ss_pred CCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceEE--EEecC-CCCC--ceEeecCCeEEEEEeccCCccccc
Confidence 478855443333333455666666653 3 447999999643 22211 1111 1222232 134445544322
Q ss_pred ----C--CCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEec--CC--cEEEEccCCCeEEcCCe
Q 005991 484 ----Y--TSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLP--GG--RLKIIDRKKNIFKLAQG 553 (666)
Q Consensus 484 ----~--~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~--dG--~l~i~GR~~d~ikl~~G 553 (666)
. ..+.+.|..-||.|+.. .|.|+ |+.||+.++.. ++ .+.|+||.+.++.+ .|
T Consensus 342 ~~~~~l~~~ele~G~~YelviTt~---~GLyR--------------Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l-~g 403 (528)
T PF03321_consen 342 EQPKTLLLHELEVGEEYELVITTN---SGLYR--------------YRIGDVVRVTGFYNQTPRIEFVGRRGQVLSL-FG 403 (528)
T ss_dssp --SSSEEGGG--TT-EEEEEEEST---TS-SS--------------EEECEEEEEEEEETTEEEEEEEEETTEEE-S-SS
T ss_pred CCCceecHHHhcCCCeEEEEEecc---cceee--------------eecCCEEEEeeccCCCcEEEEeccCCceeec-ce
Confidence 1 12233344677888764 24443 99999999852 34 69999999999998 79
Q ss_pred eeeccHHHHHHHhcC-----cCcceEEEEEeC---CCCeEEEEEEc
Q 005991 554 EYVAPEKIENVYAKC-----KFVLQCFIYGDS---FNSCLVAIVAV 591 (666)
Q Consensus 554 ~~v~p~eIE~~l~~~-----p~V~~~~V~g~~---~~~~~va~vv~ 591 (666)
|+++-.+|++++.+. -.+.+..+..+. ....-+-++.+
T Consensus 404 Ekl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~ 449 (528)
T PF03321_consen 404 EKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWEL 449 (528)
T ss_dssp --EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEE
T ss_pred eecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEe
Confidence 999999999999654 336676776662 23455555554
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=98.21 E-value=0.00018 Score=79.37 Aligned_cols=132 Identities=13% Similarity=0.124 Sum_probs=77.4
Q ss_pred eEEEEecCCCCcHHHHHHHHHHh-CC-ccccCcccchhhhhhhccCCCCCCCCCccCC--ccCcEEEEEecCCCC-----
Q 005991 413 VRFMGSGASPLSPDVMDFLKVCF-GC-QVMEGYGMTETSCIISAIDKGDNLSGHVGSP--NPACEIKLVDVPEMN----- 483 (666)
Q Consensus 413 lr~i~~gG~~l~~~~~~~~~~~~-~~-~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~p--~~~~~v~ivd~~~~~----- 483 (666)
+..++.||.. .....++..+ +. .+..+|++||+... .+......+..++.. ..+.-+..++.++.+
T Consensus 307 i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg~~g--i~~~~~~~p~~~~~~l~~~~~ffEFiP~~~~~~~~~~ 381 (597)
T PLN02249 307 LDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSESYFG--INLNPMCKPSEVSYTIMPNMAYFEFLPHNHDGDGALD 381 (597)
T ss_pred EEEEecCChH---HHHHHHHHHcCCCccccccccccceEEE--eecCCCCCCCCcceEecCCcEEEEeeecccCCcccCC
Confidence 6667777755 4556666655 33 35689999996432 221111111112221 113334445432211
Q ss_pred ---C--CCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecC----CcEEEEccCCCeEEcCCee
Q 005991 484 ---Y--TSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPG----GRLKIIDRKKNIFKLAQGE 554 (666)
Q Consensus 484 ---~--~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~d----G~l~i~GR~~d~ikl~~G~ 554 (666)
. +.+.+.|..-||+|+.. .|-|. |+.||+.++..- -.|.|+||.+.++.+ .||
T Consensus 382 ~~~~v~l~eVe~G~~Y~lVvTT~---~GLyR--------------Y~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~-~GE 443 (597)
T PLN02249 382 ETSLVELADVEVGKEYELVITTY---AGLYR--------------YRVGDILRVTGFHNSAPQFKFIRRKNVLLSI-ESD 443 (597)
T ss_pred CCcEecHHHcCCCCeEEEEEEcc---cceeE--------------eecCCEEEEeeccCCCcEEEEEccCCcceec-ccc
Confidence 0 11122233556777542 23332 999999998632 369999999999998 899
Q ss_pred eeccHHHHHHHhc
Q 005991 555 YVAPEKIENVYAK 567 (666)
Q Consensus 555 ~v~p~eIE~~l~~ 567 (666)
++.-++++.++.+
T Consensus 444 Kl~e~~v~~Av~~ 456 (597)
T PLN02249 444 KTDEADLQKAVEN 456 (597)
T ss_pred cCCHHHHHHHHHH
Confidence 9999999998865
No 136
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.62 E-value=0.0026 Score=69.72 Aligned_cols=137 Identities=13% Similarity=0.156 Sum_probs=78.9
Q ss_pred CceEEEEecCCCCcHHHHHHHHHHh-CCccc-cCcccchhhhhhhccCCCCCCCC-CccCCccCcE-EEEEecCCCCC--
Q 005991 411 GRVRFMGSGASPLSPDVMDFLKVCF-GCQVM-EGYGMTETSCIISAIDKGDNLSG-HVGSPNPACE-IKLVDVPEMNY-- 484 (666)
Q Consensus 411 ~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~-~~YG~TE~~~~~~~~~~~~~~~~-~vG~p~~~~~-v~ivd~~~~~~-- 484 (666)
+++++|.+--..-.......++..+ |.+++ -+||+||+.+.+-..+. ..+. .....+|+.- +..++.++++.
T Consensus 293 P~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~ginl~p~--~~p~~~sy~L~p~~~yFEFip~~~~~~~~ 370 (606)
T PLN02247 293 PRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINLKPL--SDPSDVSYTLLPNMAYFEFLPVDKNNGEV 370 (606)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEEEeccCcC--CCccCCceeecCCcEEEEEeecCCCcccc
Confidence 5777766533333455556666555 56555 58999997543322221 1111 1223344422 34443332210
Q ss_pred ------------------------CCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEe----cCC
Q 005991 485 ------------------------TSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWL----PGG 536 (666)
Q Consensus 485 ------------------------~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~----~dG 536 (666)
+.+.+.|..-||+|+.. .|.|. ||.||+.++. ..-
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt~---~GLYR--------------YrlGDvv~V~GF~n~~P 433 (606)
T PLN02247 371 IHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTTF---TGLYR--------------YRVGDILMVTGFYNNAP 433 (606)
T ss_pred cccccccccccccccccccCceecHHHccCCCeEEEEEEec---CceEE--------------EecCCEEEEeeecCCCc
Confidence 00122233456666532 23222 8999998874 334
Q ss_pred cEEEEccCCCeEEcCCeeeeccHHHHHHHhc
Q 005991 537 RLKIIDRKKNIFKLAQGEYVAPEKIENVYAK 567 (666)
Q Consensus 537 ~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~ 567 (666)
.|.|++|.+.+..+ .|++.+-.++-.++.+
T Consensus 434 ~~~Fv~R~~~vlsi-~gEK~tE~~l~~Av~~ 463 (606)
T PLN02247 434 QFRFVQRRNVVLSI-DTDKTNEEDLLKAVTQ 463 (606)
T ss_pred eEEEEecCCceeec-ccccCCHHHHHHHHHH
Confidence 69999999999998 8999999999888854
No 137
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.44 E-value=0.0052 Score=67.33 Aligned_cols=137 Identities=13% Similarity=0.143 Sum_probs=77.9
Q ss_pred CceEEEEecCCCCcHHHHHHHHHHh-CCccc-cCcccchhhhhhhccCCCCCCCCCc-cCCccCcE-EEEEecCCCC---
Q 005991 411 GRVRFMGSGASPLSPDVMDFLKVCF-GCQVM-EGYGMTETSCIISAIDKGDNLSGHV-GSPNPACE-IKLVDVPEMN--- 483 (666)
Q Consensus 411 ~~lr~i~~gG~~l~~~~~~~~~~~~-~~~v~-~~YG~TE~~~~~~~~~~~~~~~~~v-G~p~~~~~-v~ivd~~~~~--- 483 (666)
+++++|.+-...-.......++..+ |.+++ -+|++||+.+.+-..+. ..+..+ +..+|+.- +..++.++.+
T Consensus 304 P~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~ginl~P~--~~p~~~sy~L~p~~~yFEFip~~~~~~~~ 381 (612)
T PLN02620 304 PNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPL--CKPSEVSYTLIPTMAYFEFLPVHRNNGVT 381 (612)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEEEeccCCC--CCcccceeeecCCcEEEEEeeccCccccc
Confidence 5777665533333444555565544 56655 68999997543322221 112222 23334422 3334322110
Q ss_pred ------------------CCCCCCCCCccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEe----cCCcEEEE
Q 005991 484 ------------------YTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWL----PGGRLKII 541 (666)
Q Consensus 484 ------------------~~~~~~~~~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~----~dG~l~i~ 541 (666)
.+.+.+.|..-||+|+.. .|.|. ||.||+.++. ..-.|.|+
T Consensus 382 ~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt~---~GLyR--------------YrlGDvv~V~Gf~n~~P~~~Fv 444 (612)
T PLN02620 382 NSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTTY---AGLYR--------------YRVGDVLRVAGFKNKAPQFSFI 444 (612)
T ss_pred ccccccccccccccCccccHHHccCCCeEEEEEEec---CceEE--------------EecCCEEEEeeecCCCceEEEE
Confidence 011122233556777542 23222 8999998874 23469999
Q ss_pred ccCCCeEEcCCeeeeccHHHHHHHhc
Q 005991 542 DRKKNIFKLAQGEYVAPEKIENVYAK 567 (666)
Q Consensus 542 GR~~d~ikl~~G~~v~p~eIE~~l~~ 567 (666)
+|.+.+..+ .|++.+-.++-.++.+
T Consensus 445 ~R~~~~lsi-~gEK~tE~~l~~Av~~ 469 (612)
T PLN02620 445 CRKNVVLSI-DSDKTDEVELQNAVKN 469 (612)
T ss_pred eecCceeec-ccccCCHHHHHHHHHH
Confidence 999999998 8999999999888744
No 138
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=94.37 E-value=0.26 Score=51.91 Aligned_cols=92 Identities=12% Similarity=0.026 Sum_probs=75.7
Q ss_pred eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEE
Q 005991 112 KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAI 189 (666)
Q Consensus 112 ~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 189 (666)
..+|+.|+...+..+|+.|...|..+||+|.+...-+. .-+-..+|+.++|++++|+.+. .-++-..++++.++.++
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEE
Confidence 46899999999999999999999999999888766221 1167889999999999999883 45667789999999999
Q ss_pred EEccccHHHHHHhhh
Q 005991 190 FCIPQTLNTLLSFIS 204 (666)
Q Consensus 190 i~~~~~~~~~~~~~~ 204 (666)
.+.++.+-.+.+...
T Consensus 187 ~~tps~~l~lae~~~ 201 (438)
T COG1541 187 AATPSYLLYLAEEAE 201 (438)
T ss_pred EEChHHHHHHHHHHH
Confidence 999988766655544
No 139
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=93.63 E-value=0.028 Score=46.45 Aligned_cols=40 Identities=25% Similarity=0.183 Sum_probs=27.1
Q ss_pred eeeeccHHHHHHHhcCcCcc-eEEEE--EeCCCCeEEEEEEcC
Q 005991 553 GEYVAPEKIENVYAKCKFVL-QCFIY--GDSFNSCLVAIVAVD 592 (666)
Q Consensus 553 G~~v~p~eIE~~l~~~p~V~-~~~V~--g~~~~~~~va~vv~~ 592 (666)
|.||+|..||+++.++|++. +..++ ...+.+.+...|...
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~ 43 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTREGGLDELTVRVELR 43 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEETTEEEEEEEEEES
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcCCCCcEEEEEEEEC
Confidence 78999999999999999998 43332 233335555556553
No 140
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=87.99 E-value=5.8 Score=42.66 Aligned_cols=96 Identities=15% Similarity=0.090 Sum_probs=70.9
Q ss_pred cCccCCc--eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEecCCCCCHHHHHHH
Q 005991 105 DGTVGGY--KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVPLYDTLGPDAVKYV 180 (666)
Q Consensus 105 ~~~~~~~--~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~ 180 (666)
.|.++.. ..+|..++......++..+...|+++||++....+.+. ......++....|+..+++.... .+.+...
T Consensus 84 SGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~ 162 (422)
T TIGR02155 84 SGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQL 162 (422)
T ss_pred CCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHH
Confidence 4555543 34577777766677778888889999999887665442 22234677889999999988754 5778899
Q ss_pred HHhcCceEEEEccccHHHHHH
Q 005991 181 VNHAEIEAIFCIPQTLNTLLS 201 (666)
Q Consensus 181 l~~~~~~~vi~~~~~~~~~~~ 201 (666)
|++.++.++++.+.....+.+
T Consensus 163 i~~~~~t~l~~~Ps~l~~L~~ 183 (422)
T TIGR02155 163 IQDFKPDIIMVTPSYMLNLLE 183 (422)
T ss_pred HHHHCCCEEEEcHHHHHHHHH
Confidence 999999999999887665544
No 141
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=87.11 E-value=7.5 Score=42.16 Aligned_cols=92 Identities=13% Similarity=0.092 Sum_probs=68.1
Q ss_pred cCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh--HHHHHHHHHhcCCeEEecCCCCCHHHHHHH
Q 005991 105 DGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE--WLIVDHACSAYSYISVPLYDTLGPDAVKYV 180 (666)
Q Consensus 105 ~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~ 180 (666)
.|.++. ...+|..++...+...+..+...|+.+||++.+..+.+.. .....+|+...|+.++|... .+....+
T Consensus 95 SGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~ 171 (445)
T TIGR03335 95 SGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRI 171 (445)
T ss_pred CCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHH
Confidence 444443 3457899999888888888888999999999988876542 23456788899999887653 2345678
Q ss_pred HHhcCceEEEEccccHHHH
Q 005991 181 VNHAEIEAIFCIPQTLNTL 199 (666)
Q Consensus 181 l~~~~~~~vi~~~~~~~~~ 199 (666)
+++.++.++++.....-.+
T Consensus 172 i~~~~~t~l~~~ps~ll~L 190 (445)
T TIGR03335 172 IESYRPTGIVASVFKLLRL 190 (445)
T ss_pred HHHhCCCEEEECHHHHHHH
Confidence 8999999998876654443
No 142
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=76.96 E-value=32 Score=37.73 Aligned_cols=105 Identities=20% Similarity=0.108 Sum_probs=74.1
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEe
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVP 167 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vp 167 (666)
.++.++++.. ..|.++. ...+|+..+...+..+... .++++++++...++-.. .+...+++++..|+.+++
T Consensus 164 ~~~~~a~i~~--TSGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 238 (513)
T PRK07656 164 DPDDVADILF--TSGTTGRPKGAMLTHRQLLSNAADWAEY---LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILP 238 (513)
T ss_pred CCCceEEEEe--CCCCCCCCCEEEEecHHHHHHHHHHHHh---hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEe
Confidence 3455665543 2444443 3467899887666554433 47889999988877543 334567899999998877
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHh
Q 005991 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSF 202 (666)
Q Consensus 168 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 202 (666)
. +...++.+...+++.++.+++..+.....+...
T Consensus 239 ~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~ 272 (513)
T PRK07656 239 L-PVFDPDEVFRLIETERITVLPGPPTMYNSLLQH 272 (513)
T ss_pred c-CcCCHHHHHHHHHHhCCeEEechHHHHHHHHcC
Confidence 5 557889999999999999999888776665543
No 143
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=76.28 E-value=44 Score=36.71 Aligned_cols=116 Identities=10% Similarity=0.033 Sum_probs=78.5
Q ss_pred CCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhH-HHHHHHHHhcCCeEEecCC
Q 005991 94 DYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEW-LIVDHACSAYSYISVPLYD 170 (666)
Q Consensus 94 d~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~vpl~~ 170 (666)
+.++++.. ..|.++. ...+|++.+...+..... ..+++++|++...++-...+ +...++++..|+..+..+.
T Consensus 167 ~~~~~i~~--TSGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 241 (521)
T PRK06187 167 NDAAAMLY--TSGTTGHPKGVVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRR 241 (521)
T ss_pred cceEEEEE--CCCCCCCCceEEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCC
Confidence 45565543 2454443 346789888866666555 45789999998888765332 3344558888998887766
Q ss_pred CCCHHHHHHHHHhcCceEEEEccccHHHHHHhhh----cCCCceEEEEe
Q 005991 171 TLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFIS----EIPSVHLIVVV 215 (666)
Q Consensus 171 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~----~~~~l~~ii~~ 215 (666)
. +++.+...+++.++..+++.+.....+..... .++.++.++.-
T Consensus 242 ~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~ 289 (521)
T PRK06187 242 F-DPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYG 289 (521)
T ss_pred C-CHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEc
Confidence 4 88999999999999999998877666554322 23445554443
No 144
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=74.03 E-value=43 Score=35.84 Aligned_cols=114 Identities=15% Similarity=0.003 Sum_probs=77.9
Q ss_pred CCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH-hHHHHHHHHHhcCCeEEecC
Q 005991 93 PDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP-EWLIVDHACSAYSYISVPLY 169 (666)
Q Consensus 93 pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~-e~~~~~lA~~~~G~~~vpl~ 169 (666)
++.++++.. ..|.++. ...+|++.+...+..++.. .+++++|++...++-.. ..+..+++++..|+..+..+
T Consensus 110 ~~~~~~i~~--TSGtTG~PK~v~~s~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~ 184 (436)
T TIGR01923 110 MDQIATLMF--TSGTTGKPKAVPHTFRNHYASAVGSKEN---LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVD 184 (436)
T ss_pred cCceEEEEe--CCCCCCCCcEEEEehHHHHHHHHHHHhh---cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecc
Confidence 355665543 2455454 3478999988777766654 47899999887776532 22335678889999888775
Q ss_pred CCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEE
Q 005991 170 DTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVV 214 (666)
Q Consensus 170 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~ 214 (666)
+. +.+...+++.++.++...+.....+.+.....+.++.+++
T Consensus 185 ~~---~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~l~~~~~ 226 (436)
T TIGR01923 185 KF---NQLLEMIANERVTHISLVPTQLNRLLDEGGHNENLRKILL 226 (436)
T ss_pred hH---HHHHHHHHHhCCeEEEeHHHHHHHHHhCcCCCCceEEEEE
Confidence 43 4888899999999999988776666554333345666555
No 145
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=72.90 E-value=54 Score=34.80 Aligned_cols=120 Identities=19% Similarity=0.137 Sum_probs=84.4
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCC--HhHHHHHHHHHhcCCeEE
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINR--PEWLIVDHACSAYSYISV 166 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~-~gv~~gd~V~i~~~n~--~e~~~~~lA~~~~G~~~v 166 (666)
.|+.++++.. ..|.++. ...+|++.+...+..+. +.. .+++ |++..++|-+ ..++..+++++..|+..+
T Consensus 153 ~~~~~~~i~~--TSGTTG~pK~v~~t~~~~~~~~~~~~--~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~ 226 (417)
T PF00501_consen 153 SPDDPAFILF--TSGTTGKPKGVVLTHRNLLAQARALA--LPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLV 226 (417)
T ss_dssp TTTSEEEEEE--ESSSSSSEEEEEEEHHHHHHHHHHHH--HHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEE
T ss_pred CccceeEeec--cccccccccccccccccccccccccc--cccccccC--ceEEeecccccccccccccccccccccccc
Confidence 5688888765 2454444 46789999998888877 433 2333 6776666654 333478899999999998
Q ss_pred ecCCCCC--HHHHHHHHHhcCceEEEEccccHHHHHHhh--------hcCCCceEEEEeCC
Q 005991 167 PLYDTLG--PDAVKYVVNHAEIEAIFCIPQTLNTLLSFI--------SEIPSVHLIVVVGG 217 (666)
Q Consensus 167 pl~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~--------~~~~~l~~ii~~~~ 217 (666)
..+.... ++.+...+++.++..+++.+.....+.+.. ..++.++.+++-++
T Consensus 227 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~ 287 (417)
T PF00501_consen 227 LPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGE 287 (417)
T ss_dssp EESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESS
T ss_pred ccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccc
Confidence 8876644 577889999999999999998887777622 14566887776544
No 146
>PRK12583 acyl-CoA synthetase; Provisional
Probab=72.57 E-value=65 Score=35.86 Aligned_cols=103 Identities=14% Similarity=0.073 Sum_probs=71.5
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--CHhHHHHHHHHHhcCCeEEe
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLIN--RPEWLIVDHACSAYSYISVP 167 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n--~~e~~~~~lA~~~~G~~~vp 167 (666)
.++.+|.+.. ..|.++. ...+|++.+...+..+... .+++++|++....+- ...++..+++++..|+.++.
T Consensus 199 ~~~~~a~i~~--TSGsTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~ 273 (558)
T PRK12583 199 DRDDPINIQY--TSGTTGFPKGATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVY 273 (558)
T ss_pred CCCCcEEEEE--CCCCCCCCceEEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEe
Confidence 4555665443 2454443 3567888886665554443 478899998777664 34566677888999998875
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEccccHHHH
Q 005991 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTL 199 (666)
Q Consensus 168 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 199 (666)
......++.+...+++.++..++..+.....+
T Consensus 274 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l 305 (558)
T PRK12583 274 PNEAFDPLATLQAVEEERCTALYGVPTMFIAE 305 (558)
T ss_pred ecCCCCHHHHHHHHHHcCCeEEeccHHHHHHH
Confidence 45557788888999999999998877655433
No 147
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=70.21 E-value=16 Score=27.77 Aligned_cols=54 Identities=17% Similarity=0.311 Sum_probs=41.4
Q ss_pred EEcCCeeeeccHHHHHHHhcCcCcceEEEEEeCCCCeEEEEEEcChhHHHHHHHHc
Q 005991 548 FKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQ 603 (666)
Q Consensus 548 ikl~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~~~~ 603 (666)
|++..|. -...++.+.+.++|.|.+|..+.-. .+.++-+.+++.+++.+++.++
T Consensus 3 V~~~~~~-~~~~~~~~~l~~~p~V~~~~~vtG~-~d~~~~v~~~d~~~l~~~i~~~ 56 (74)
T PF01037_consen 3 VKVEPGH-DAYDEFAEALAEIPEVVECYSVTGE-YDLILKVRARDMEELEEFIREK 56 (74)
T ss_dssp EEESTTG-THHHHHHHHHHTSTTEEEEEEESSS-SSEEEEEEESSHHHHHHHHHHT
T ss_pred EEEcCCC-chHHHHHHHHHcCCCEEEEEEEeCC-CCEEEEEEECCHHHHHHHHHHH
Confidence 3443344 4467889999999999999887543 5777777889999999998775
No 148
>PRK08315 AMP-binding domain protein; Validated
Probab=69.54 E-value=78 Score=35.24 Aligned_cols=102 Identities=18% Similarity=0.104 Sum_probs=71.2
Q ss_pred CCCceEEEEEeccCccCCc--eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--CHhHHHHHHHHHhcCCeEEec
Q 005991 93 PDYKYLGTRVRVDGTVGGY--KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLIN--RPEWLIVDHACSAYSYISVPL 168 (666)
Q Consensus 93 pd~~al~~~~~~~~~~~~~--~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n--~~e~~~~~lA~~~~G~~~vpl 168 (666)
++.++.+.. ..|.++.. ..+|++.+...+..+... .+++++|++....+- ...++..+++++..|+..+..
T Consensus 198 ~~~~a~i~~--TSGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~ 272 (559)
T PRK08315 198 PDDPINIQY--TSGTTGFPKGATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYP 272 (559)
T ss_pred CCCcEEEEE--cCCCCCCcceEEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEe
Confidence 455555443 24555543 467888776555544433 488999998877775 345556678899999988855
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEccccHHHH
Q 005991 169 YDTLGPDAVKYVVNHAEIEAIFCIPQTLNTL 199 (666)
Q Consensus 169 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 199 (666)
.....+..+...+++.++.+++..+.....+
T Consensus 273 ~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~ 303 (559)
T PRK08315 273 GEGFDPLATLAAVEEERCTALYGVPTMFIAE 303 (559)
T ss_pred cCCCCHHHHHHHHHHcCCeEEecchHHHHHH
Confidence 6667788899999999999998877655443
No 149
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=68.98 E-value=1.1e+02 Score=34.07 Aligned_cols=119 Identities=15% Similarity=0.076 Sum_probs=79.5
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEe
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVP 167 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vp 167 (666)
.|+.+|++.. ..|.++. ...+|++.+...+.... ...++.++|++..++|-.. .+....+..+..|+..+.
T Consensus 181 ~~~d~a~i~~--TSGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~ 255 (539)
T PRK06334 181 DPEDVAVILF--TSGTEKLPKGVPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVF 255 (539)
T ss_pred CcCCEEEEEE--CCCCCCCCCEEEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEE
Confidence 4577777654 2455443 35688888776544433 3457888998888777432 233345677888988776
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhh----hcCCCceEEEEe
Q 005991 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI----SEIPSVHLIVVV 215 (666)
Q Consensus 168 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~l~~ii~~ 215 (666)
......++.+...|++.++..+...+.....+.+.. ..++.++.+++-
T Consensus 256 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~g 307 (539)
T PRK06334 256 AYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIG 307 (539)
T ss_pred ecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEEC
Confidence 655678899999999999999999888766655432 134556665553
No 150
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=68.84 E-value=1.2e+02 Score=32.02 Aligned_cols=121 Identities=12% Similarity=0.041 Sum_probs=84.2
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh-HHHHHHHHHhcCCeEEec
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE-WLIVDHACSAYSYISVPL 168 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl 168 (666)
.++.++++.. ..|..+. ...+|++.+...+..+.. ..+++++|++....+-... .+..+++.+..|+..+..
T Consensus 118 ~~~~~~~i~~--TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~ 192 (408)
T TIGR01733 118 GPDDLAYVIY--TSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVP 192 (408)
T ss_pred CCCCcEEEEE--cCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEc
Confidence 3566777654 1444333 456788888776666655 4467789988888776543 455678888889888877
Q ss_pred CCCCC--HHHHHHHHHhcCceEEEEccccHHHHHHhh-hcCCCceEEEEeCC
Q 005991 169 YDTLG--PDAVKYVVNHAEIEAIFCIPQTLNTLLSFI-SEIPSVHLIVVVGG 217 (666)
Q Consensus 169 ~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-~~~~~l~~ii~~~~ 217 (666)
+.... ++.+..++++.++..+++.+.....+.+.. ...+.++.++.-+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~v~~~g~ 244 (408)
T TIGR01733 193 PEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALPPALASLRLVILGGE 244 (408)
T ss_pred ChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhhhcccCceEEEEeCc
Confidence 66554 788999999999999999988777666543 23456776665443
No 151
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=68.72 E-value=77 Score=35.50 Aligned_cols=119 Identities=11% Similarity=0.000 Sum_probs=78.2
Q ss_pred CCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh--HHHHHHHHHhcCCeEEec
Q 005991 93 PDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE--WLIVDHACSAYSYISVPL 168 (666)
Q Consensus 93 pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl 168 (666)
++.+|++.. ..|.++. ...+|++.+...+.. .....++.++|++....+-... ....+++.+..|+..+..
T Consensus 204 ~~~~a~i~~--TSGTTG~PKgV~~s~~~l~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~ 278 (570)
T PRK04319 204 REDGAILHY--TSGSTGKPKGVLHVHNAMLQHYQT---GKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVID 278 (570)
T ss_pred CCCCEEEEe--CCCCCCCCCEEEEecHHHHHHHHH---HHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEE
Confidence 456666543 2455453 346788877554433 3344578889987655544332 234577888999988877
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhh------cCCCceEEEEeC
Q 005991 169 YDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFIS------EIPSVHLIVVVG 216 (666)
Q Consensus 169 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~------~~~~l~~ii~~~ 216 (666)
.....++.+...+++.++..++..+.....+.+... .++.++.+++-+
T Consensus 279 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG 332 (570)
T PRK04319 279 GGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVG 332 (570)
T ss_pred CCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcc
Confidence 777889999999999999999998887766654321 234566555433
No 152
>PLN03051 acyl-activating enzyme; Provisional
Probab=67.16 E-value=57 Score=35.87 Aligned_cols=104 Identities=9% Similarity=-0.185 Sum_probs=69.2
Q ss_pred CCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh-HHHHHHHHHhcCCeEEecC
Q 005991 93 PDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE-WLIVDHACSAYSYISVPLY 169 (666)
Q Consensus 93 pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~ 169 (666)
|+.+|++.. ..|.++. ...+|++.+...+... ....++.++|++...+|-... ....+++++..|++.+...
T Consensus 118 ~~d~a~i~y--TSGTTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~ 192 (499)
T PLN03051 118 VESVTNILF--SSGTTGEPKAIPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYG 192 (499)
T ss_pred ccceEEEEe--CCCCCCCCceEEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecC
Confidence 456666544 2454443 3456777665443322 234578889988766664321 1235678889999988776
Q ss_pred CCCCHHHHHHHHHhcCceEEEEccccHHHHHH
Q 005991 170 DTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (666)
Q Consensus 170 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 201 (666)
....++.+...+++.++.++...+.....+.+
T Consensus 193 ~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~ 224 (499)
T PLN03051 193 GAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRH 224 (499)
T ss_pred CCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHh
Confidence 55567889999999999999998877666544
No 153
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=63.71 E-value=41 Score=32.61 Aligned_cols=54 Identities=19% Similarity=0.111 Sum_probs=43.9
Q ss_pred HhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCc
Q 005991 131 LFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEI 186 (666)
Q Consensus 131 ~~~gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~ 186 (666)
...|+.++|++. .+|-.. -+...+++++..|++.|.+ +++.++++-..+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 566899999998 888654 4445789999999998887 68999999888887664
No 154
>PRK08308 acyl-CoA synthetase; Validated
Probab=63.34 E-value=1.6e+02 Score=31.19 Aligned_cols=117 Identities=10% Similarity=0.068 Sum_probs=77.8
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEe
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVP 167 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vp 167 (666)
.++.++++.. ..|.++. ...+|++.+...+..+.. ..++.++|++...+|-.. .++..+++++..|+..+.
T Consensus 99 ~~~~~~~i~~--TSGtTG~PKgv~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~ 173 (414)
T PRK08308 99 LAEEPSLLQY--SSGTTGEPKLIRRSWTEIDREIEAYNE---ALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVI 173 (414)
T ss_pred CCCCceEEEE--CCCCCCCCcEEEEehHhHHHHHHHHHH---hhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEe
Confidence 4566776654 2455454 346799888766655554 346678888877777553 345567888999998876
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCceEEEE
Q 005991 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVV 214 (666)
Q Consensus 168 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~ 214 (666)
... ..++.+...+++.++.+++..+.....+.+.......++.++.
T Consensus 174 ~~~-~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~~~~ 219 (414)
T PRK08308 174 ITN-KNPKFALNILRNTPQHILYAVPLMLHILGRLLPGTFQFHAVMT 219 (414)
T ss_pred cCC-CCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCccccccEEEE
Confidence 654 5678888899999999999888776665543322233444443
No 155
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=60.90 E-value=1.1e+02 Score=35.07 Aligned_cols=120 Identities=13% Similarity=-0.063 Sum_probs=73.0
Q ss_pred CCCceEEEEEeccCccCCc--eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCC
Q 005991 93 PDYKYLGTRVRVDGTVGGY--KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYD 170 (666)
Q Consensus 93 pd~~al~~~~~~~~~~~~~--~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~ 170 (666)
++.++++.. ..|.+|.. ..+|.+.+... .+...-...++.++|++..+.+.+......+++.+..|++.+..+.
T Consensus 262 ~~~~a~ily--TSGTTG~PKgV~~sh~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~L~~G~t~vl~~~ 337 (655)
T PRK03584 262 FDHPLWILY--SSGTTGLPKCIVHGHGGILLE--HLKELGLHCDLGPGDRFFWYTTCGWMMWNWLVSGLLVGATLVLYDG 337 (655)
T ss_pred CCCcEEEEe--cCCCCCCCceEEECccHHHHH--HHHHHHHhcCCCCCCEEEEcCCchHHhHHHHHHHHHcCCEEEEeCC
Confidence 356666543 24554443 34566544321 1111112347889998877766665443456788999999887653
Q ss_pred ---CCCHHHHHHHHHhcCceEEEEccccHHHHHHhh------hcCCCceEEEEeC
Q 005991 171 ---TLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI------SEIPSVHLIVVVG 216 (666)
Q Consensus 171 ---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~------~~~~~l~~ii~~~ 216 (666)
...++.+..++++.++..+.+.+.....+.+.. ..++.++.+++-+
T Consensus 338 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~G 392 (655)
T PRK03584 338 SPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTG 392 (655)
T ss_pred CCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEec
Confidence 235788999999999999988877666554321 1234566665544
No 156
>PRK07638 acyl-CoA synthetase; Validated
Probab=60.17 E-value=1.4e+02 Score=32.45 Aligned_cols=103 Identities=9% Similarity=-0.012 Sum_probs=69.5
Q ss_pred CCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh-HHHHHHHHHhcCCeEEecCC
Q 005991 94 DYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE-WLIVDHACSAYSYISVPLYD 170 (666)
Q Consensus 94 d~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~~ 170 (666)
+.+|++.. ..|.+|. ...+|.+.+...+...+ ...+++++|++....+-... ++...+..+..|++.+.. +
T Consensus 143 ~~~a~i~~--TSGtTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~ 216 (487)
T PRK07638 143 NAPFYMGF--TSGSTGKPKAFLRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-R 216 (487)
T ss_pred CCcEEEEe--CCCCCCCCcEEEEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-C
Confidence 33454433 2455453 34567777655544333 34578899988876665433 345566677889887755 5
Q ss_pred CCCHHHHHHHHHhcCceEEEEccccHHHHHHh
Q 005991 171 TLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSF 202 (666)
Q Consensus 171 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 202 (666)
...++++...+++.++.++...+.....+...
T Consensus 217 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 248 (487)
T PRK07638 217 KFIPNQVLDKLETENISVMYTVPTMLESLYKE 248 (487)
T ss_pred CCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhC
Confidence 67888999999999999999998877766654
No 157
>PRK07788 acyl-CoA synthetase; Validated
Probab=59.89 E-value=1e+02 Score=34.22 Aligned_cols=117 Identities=16% Similarity=0.035 Sum_probs=73.9
Q ss_pred CCceEEEEEeccCccCCc--eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhH-HHHHHHHHhcCCeEEecCC
Q 005991 94 DYKYLGTRVRVDGTVGGY--KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEW-LIVDHACSAYSYISVPLYD 170 (666)
Q Consensus 94 d~~al~~~~~~~~~~~~~--~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~vpl~~ 170 (666)
+.++++.. ..|.++.. ..+|...+...+. ......++.+++++....|-...+ +..+++++..|+..+.. .
T Consensus 207 ~~~~~i~~--TSGTTG~PKgv~~s~~~~~~~~~---~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~-~ 280 (549)
T PRK07788 207 KPGGIVIL--TSGTTGTPKGAPRPEPSPLAPLA---GLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLR-R 280 (549)
T ss_pred CCCcEEEE--CCCCCCCCCEEeccCccHHHHHH---HHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEEC-C
Confidence 44554433 25555543 3456665554333 334456788899887776654332 22356677888887665 5
Q ss_pred CCCHHHHHHHHHhcCceEEEEccccHHHHHHhhh------cCCCceEEEEeC
Q 005991 171 TLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFIS------EIPSVHLIVVVG 216 (666)
Q Consensus 171 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~------~~~~l~~ii~~~ 216 (666)
...++++...+++.++..++..+.....+.+... .++.++.+++-+
T Consensus 281 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG 332 (549)
T PRK07788 281 RFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSG 332 (549)
T ss_pred CCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeC
Confidence 6778899999999999999998887766654332 244566665543
No 158
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=59.45 E-value=1.7e+02 Score=32.73 Aligned_cols=117 Identities=16% Similarity=0.074 Sum_probs=77.0
Q ss_pred CCCCceEEEEEeccCccCCc--eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh-HHHHHHHHHhcCCeEEec
Q 005991 92 YPDYKYLGTRVRVDGTVGGY--KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE-WLIVDHACSAYSYISVPL 168 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~~--~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl 168 (666)
.++.+|++.. ..|.++.. ..+|...+...+.... ...++.++|++..++|-... -+...++.+..|+..+..
T Consensus 170 ~~~~~a~i~~--TSGTTG~PKgV~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~ 244 (563)
T PLN02860 170 APDDAVLICF--TSGTTGRPKGVTISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL 244 (563)
T ss_pred CCCCeEEEEe--cCCCCCCCceEEeehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec
Confidence 4567776544 25655543 4677877765444332 34578899988887775432 223467778888887765
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhh------hcCCCceEEEE
Q 005991 169 YDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI------SEIPSVHLIVV 214 (666)
Q Consensus 169 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~------~~~~~l~~ii~ 214 (666)
+...+..+...+++.++.++...+.....+.+.. ...+.++.++.
T Consensus 245 -~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~ 295 (563)
T PLN02860 245 -PKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILN 295 (563)
T ss_pred -CCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEe
Confidence 5678889999999999999999887766655432 12345665554
No 159
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=56.25 E-value=1.2e+02 Score=33.25 Aligned_cols=93 Identities=14% Similarity=0.043 Sum_probs=68.7
Q ss_pred cCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh-HHHHHHHHHhcCCeEEecCCCCCHHHHHHHH
Q 005991 105 DGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE-WLIVDHACSAYSYISVPLYDTLGPDAVKYVV 181 (666)
Q Consensus 105 ~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l 181 (666)
.|.++. ...+|+..+...+..+... .++.+||++...++-... .+..+++++..|+..+.. +...++.+...+
T Consensus 170 SGTTG~PK~v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i 245 (515)
T TIGR03098 170 SGSTGRPKGVVLSHRNLVAGAQSVATY---LENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKAL 245 (515)
T ss_pred CCCCCCCceEEEecHHHHHHHHHHHHH---hCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHH
Confidence 444443 4567888887766655543 367889999888886543 234667889999988855 456788999999
Q ss_pred HhcCceEEEEccccHHHHHH
Q 005991 182 NHAEIEAIFCIPQTLNTLLS 201 (666)
Q Consensus 182 ~~~~~~~vi~~~~~~~~~~~ 201 (666)
++.++.++...+.....+..
T Consensus 246 ~~~~~t~~~~~P~~~~~l~~ 265 (515)
T TIGR03098 246 EKHGITGLAAVPPLWAQLAQ 265 (515)
T ss_pred HHcCCceEecChHHHHHHHh
Confidence 99999999998887766554
No 160
>PLN03052 acetate--CoA ligase; Provisional
Probab=56.19 E-value=1e+02 Score=35.82 Aligned_cols=118 Identities=11% Similarity=-0.125 Sum_probs=72.3
Q ss_pred CCCceEEEEEeccCccCCc--eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH-hHHHHHHHHHhcCCeEEecC
Q 005991 93 PDYKYLGTRVRVDGTVGGY--KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP-EWLIVDHACSAYSYISVPLY 169 (666)
Q Consensus 93 pd~~al~~~~~~~~~~~~~--~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~-e~~~~~lA~~~~G~~~vpl~ 169 (666)
+|.++++.. ..|.+|.. ..+|.+-+... +.......+++++|++....+-+. -+...+++.+..|++.+..+
T Consensus 355 ~d~~a~Ily--TSGTTG~PKgVv~sh~~~l~~---~~~~~~~~~l~~~d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~ 429 (728)
T PLN03052 355 VEAFTNILF--SSGTTGEPKAIPWTQLTPLRA---AADAWAHLDIRKGDIVCWPTNLGWMMGPWLVYASLLNGATLALYN 429 (728)
T ss_pred CCCcEEEEe--cCCCCCCCceEEECchHHHHH---HHHHHHhcCCCCCcEEEECCCcHHHhHHHHHHHHHHhCCEEEEeC
Confidence 366666543 24555543 34455544332 222233468899998776655443 23345668899999988766
Q ss_pred CCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhh----cCCCceEEEEe
Q 005991 170 DTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFIS----EIPSVHLIVVV 215 (666)
Q Consensus 170 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~----~~~~l~~ii~~ 215 (666)
.......+..++++.++.++.+.+.....+.+... .++.++.+++-
T Consensus 430 g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~ 479 (728)
T PLN03052 430 GSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGST 479 (728)
T ss_pred CCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEec
Confidence 44334578899999999999998877766554311 23455655543
No 161
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=56.18 E-value=2.1e+02 Score=31.75 Aligned_cols=117 Identities=13% Similarity=-0.017 Sum_probs=76.8
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEe
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVP 167 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vp 167 (666)
.+|.+|++.. ..|.++. ...+|+..+...+... ....++++++++...++-.. .++..+++.+..|+..+.
T Consensus 195 ~~~~~a~i~~--TSGTTG~PK~v~~s~~~l~~~~~~~---~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~ 269 (547)
T PRK13295 195 GPDDVTQLIY--TSGTTGEPKGVMHTANTLMANIVPY---AERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVL 269 (547)
T ss_pred CCcceeEEEe--CCCCCCCCCEEEeccHHHHHHHHHH---HHHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEe
Confidence 3456666543 2455554 3456777776554443 34457889999888887653 345667888899998776
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhh----hcCCCceEEEE
Q 005991 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI----SEIPSVHLIVV 214 (666)
Q Consensus 168 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~l~~ii~ 214 (666)
.+ ...++.+...+++.++..++..+.....+.... ..++.++.++.
T Consensus 270 ~~-~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 319 (547)
T PRK13295 270 QD-IWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLC 319 (547)
T ss_pred CC-CCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEE
Confidence 54 567889999999999999888776655544322 12344555544
No 162
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=54.78 E-value=1.3e+02 Score=33.37 Aligned_cols=106 Identities=11% Similarity=-0.052 Sum_probs=67.5
Q ss_pred CCCCceEEEEEeccCccCCc--eEEeHHHHHHHHHHHHHHH-HhCCCCCCCEEEEEcCCCHhH-HHHHHHHHhcCCeEEe
Q 005991 92 YPDYKYLGTRVRVDGTVGGY--KWMTYGEVSAARKEIGSGL-LFHGLQKGVRIGLYLINRPEW-LIVDHACSAYSYISVP 167 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~~--~~~Ty~el~~~~~~lA~~L-~~~gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~vp 167 (666)
.++.++++.. ..|.++.. ..+|...+... ..+..+ ...++.++|++..++|-...+ ....++++..|+..+.
T Consensus 174 ~~~~~~~i~~--TSGTTG~PK~v~~s~~~~~~~--~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~ 249 (539)
T PRK07008 174 DENQASSLCY--TSGTTGNPKGALYSHRSTVLH--AYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVL 249 (539)
T ss_pred CcccceEEEE--CCCCCCCCcEEEEecHHHHHH--HHHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEE
Confidence 3455555433 24555543 34566555422 222223 235788899888777643222 2334677889998887
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEccccHHHHHH
Q 005991 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (666)
Q Consensus 168 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 201 (666)
..+...++.+..++++.++..+...+.....+..
T Consensus 250 ~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~ 283 (539)
T PRK07008 250 PGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLN 283 (539)
T ss_pred ecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHh
Confidence 6677788999999999999999888776655543
No 163
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=53.23 E-value=57 Score=34.23 Aligned_cols=78 Identities=12% Similarity=0.155 Sum_probs=56.5
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCC-----CCCHHHHHHHHHhcCceEEEEcc----
Q 005991 123 RKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYD-----TLGPDAVKYVVNHAEIEAIFCIP---- 193 (666)
Q Consensus 123 ~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~-----~~~~~~l~~~l~~~~~~~vi~~~---- 193 (666)
...+.-.|+.+++++||-|.+ .+.-|+.+.-++...|+.+|.+|- +.+++.++..|... .++|+.-.
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVhl~G~ 134 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVHLAGQ 134 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEehhccC
Confidence 456666777788999996655 577899999999999999998754 35788999988875 56655432
Q ss_pred -ccHHHHHHhhh
Q 005991 194 -QTLNTLLSFIS 204 (666)
Q Consensus 194 -~~~~~~~~~~~ 204 (666)
...+.+.++.+
T Consensus 135 ~~dm~~i~~la~ 146 (374)
T COG0399 135 PCDMDAIMALAK 146 (374)
T ss_pred CCCHHHHHHHHH
Confidence 23445555443
No 164
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=52.24 E-value=2.3e+02 Score=32.79 Aligned_cols=118 Identities=13% Similarity=0.003 Sum_probs=75.3
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--HhHHHHHHHHHhcCCeEEe
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINR--PEWLIVDHACSAYSYISVP 167 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~--~e~~~~~lA~~~~G~~~vp 167 (666)
.+|.+|++.. ..|+++. ...+|++.+...+..+.. ..++.++|++...+|-. ..+...+++.+..|+..+.
T Consensus 363 ~~~d~a~i~~--TSGTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~ 437 (718)
T PRK08043 363 QPEDAALILF--TSGSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFL 437 (718)
T ss_pred CCCCeEEEEE--CCCCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEE
Confidence 3466666543 2555553 457888888776655543 34788999988887753 3444567888889998886
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhh--cCCCceEEEE
Q 005991 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFIS--EIPSVHLIVV 214 (666)
Q Consensus 168 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--~~~~l~~ii~ 214 (666)
.........+...+.+.++..++..+.....+..... .+++++.++.
T Consensus 438 ~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~lr~i~~ 486 (718)
T PRK08043 438 YPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFANPYDFARLRYVVA 486 (718)
T ss_pred eCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhcCcccccceEEEEE
Confidence 6544455667778888999988877655444332211 2345555544
No 165
>PRK06188 acyl-CoA synthetase; Validated
Probab=51.31 E-value=2.3e+02 Score=31.20 Aligned_cols=103 Identities=16% Similarity=0.023 Sum_probs=71.7
Q ss_pred CCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCC
Q 005991 93 PDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYD 170 (666)
Q Consensus 93 pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~ 170 (666)
++.+|++.. ..|.++. ...+|+..+...+... ....++..++++...++-...+...+++.+..|+..+...
T Consensus 167 ~~~~a~i~~--TSGtTG~pk~v~~s~~~l~~~~~~~---~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~- 240 (524)
T PRK06188 167 PPDIAGLAY--TGGTTGKPKGVMGTHRSIATMAQIQ---LAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA- 240 (524)
T ss_pred CCCeEEEEe--CCCCCCCCceeeeehHHHHHHHHHH---HhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-
Confidence 344555443 2444443 3567888776655433 3445788899998888877666666778888898887765
Q ss_pred CCCHHHHHHHHHhcCceEEEEccccHHHHHH
Q 005991 171 TLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (666)
Q Consensus 171 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 201 (666)
...++.+...++..++.+++..+.....+.+
T Consensus 241 ~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~ 271 (524)
T PRK06188 241 KFDPAEVLRAIEEQRITATFLVPTMIYALLD 271 (524)
T ss_pred CCCHHHHHHHHHHhCCEEEEehHHHHHHHHh
Confidence 4668889999999999999988776655544
No 166
>PLN02654 acetate-CoA ligase
Probab=50.54 E-value=2.1e+02 Score=32.91 Aligned_cols=119 Identities=10% Similarity=-0.023 Sum_probs=73.5
Q ss_pred CCCceEEEEEeccCccCCce--EEeHHHHHHHHHHHHHHH-HhCCCCCCCEEEEEcCCCHhH--HHHHHHHHhcCCeEEe
Q 005991 93 PDYKYLGTRVRVDGTVGGYK--WMTYGEVSAARKEIGSGL-LFHGLQKGVRIGLYLINRPEW--LIVDHACSAYSYISVP 167 (666)
Q Consensus 93 pd~~al~~~~~~~~~~~~~~--~~Ty~el~~~~~~lA~~L-~~~gv~~gd~V~i~~~n~~e~--~~~~lA~~~~G~~~vp 167 (666)
++.++++.. ..|.++..+ .+|.+-+... .+..+ ...+++++|++...++-+.-+ ...+++.+..|++.+.
T Consensus 274 ~~d~~~ily--TSGTTG~PKgVv~sh~~~~~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl 348 (666)
T PLN02654 274 AEDPLFLLY--TSGSTGKPKGVLHTTGGYMVY---TATTFKYAFDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLV 348 (666)
T ss_pred CCCceEEEe--cCCCCCCCceEEecccHHHHH---HHHHHHHhcCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEE
Confidence 456666543 255555433 3455443221 11112 235889999877766655322 3456788999999887
Q ss_pred cCC--C-CCHHHHHHHHHhcCceEEEEccccHHHHHHhhh------cCCCceEEEEeC
Q 005991 168 LYD--T-LGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFIS------EIPSVHLIVVVG 216 (666)
Q Consensus 168 l~~--~-~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~------~~~~l~~ii~~~ 216 (666)
... . ..++++-.++++.++.++.+.+.....+.+... .+..++.++..+
T Consensus 349 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~G 406 (666)
T PLN02654 349 FEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVG 406 (666)
T ss_pred ECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEec
Confidence 754 2 357889999999999999998887776655321 234566555544
No 167
>PRK05852 acyl-CoA synthetase; Validated
Probab=50.25 E-value=3.3e+02 Score=30.05 Aligned_cols=94 Identities=13% Similarity=-0.002 Sum_probs=66.3
Q ss_pred cCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEe-cCCCCCHHHHHH
Q 005991 105 DGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVP-LYDTLGPDAVKY 179 (666)
Q Consensus 105 ~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vp-l~~~~~~~~l~~ 179 (666)
.|.++. ...+|+..+...+..+...+ +++++|++..+.|-.. .++..+++++..|.+.+. -.....+..+..
T Consensus 185 SGTTG~PKgv~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~ 261 (534)
T PRK05852 185 GGTTGLPKMVPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWD 261 (534)
T ss_pred CCCCCCCcEEEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHH
Confidence 454444 34568888877666655443 6788998887777543 455677888888776543 334567788889
Q ss_pred HHHhcCceEEEEccccHHHHHH
Q 005991 180 VVNHAEIEAIFCIPQTLNTLLS 201 (666)
Q Consensus 180 ~l~~~~~~~vi~~~~~~~~~~~ 201 (666)
.+++.++..++..+.....+..
T Consensus 262 ~i~~~~~t~~~~~P~~~~~l~~ 283 (534)
T PRK05852 262 DIKAVGATWYTAVPTIHQILLE 283 (534)
T ss_pred HHHHcCCcEEEcChHHHHHHHh
Confidence 9999999999998887766654
No 168
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=48.93 E-value=1.9e+02 Score=32.95 Aligned_cols=120 Identities=13% Similarity=0.080 Sum_probs=74.3
Q ss_pred CCCceEEEEEeccCccCCc--eEEeHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCCCHhH--HHHHHHHHhcCCeEEe
Q 005991 93 PDYKYLGTRVRVDGTVGGY--KWMTYGEVSAARKEIGSGLL-FHGLQKGVRIGLYLINRPEW--LIVDHACSAYSYISVP 167 (666)
Q Consensus 93 pd~~al~~~~~~~~~~~~~--~~~Ty~el~~~~~~lA~~L~-~~gv~~gd~V~i~~~n~~e~--~~~~lA~~~~G~~~vp 167 (666)
++.++++.. ..|.+|.. ..+|.+.+.. .++..+. ..+++++|++...++-+... ...+++.+..|++.+.
T Consensus 231 ~~~~a~ily--TSGTTG~PKgV~~sh~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~ 305 (628)
T TIGR02316 231 SNEPSYILY--TSGTTGKPKGVQRDVGGYAV---ALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVL 305 (628)
T ss_pred CCCcEEEEE--CCCCCCCCceEEECCcHHHH---HHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEE
Confidence 466666554 24554433 3445554421 2222222 35788999887776654432 3457888999998876
Q ss_pred cCC---CCCHHHHHHHHHhcCceEEEEccccHHHHHHhh------hcCCCceEEEEeCC
Q 005991 168 LYD---TLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI------SEIPSVHLIVVVGG 217 (666)
Q Consensus 168 l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~------~~~~~l~~ii~~~~ 217 (666)
... ...++.+..++++.++..+++.+.....+.+.. ..++.++.+++-++
T Consensus 306 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe 364 (628)
T TIGR02316 306 YEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGE 364 (628)
T ss_pred eCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecC
Confidence 542 235778899999999999999888776655432 12455666655443
No 169
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=48.54 E-value=1.9e+02 Score=33.09 Aligned_cols=102 Identities=13% Similarity=-0.065 Sum_probs=61.4
Q ss_pred CCceEEEEEeccCccCCce--EEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecC--
Q 005991 94 DYKYLGTRVRVDGTVGGYK--WMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLY-- 169 (666)
Q Consensus 94 d~~al~~~~~~~~~~~~~~--~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~-- 169 (666)
+.++++.. ..|.++..+ .+|.+-+... .+.......++.++|++..+.+-+..+...+++.+..|++.+...
T Consensus 264 ~d~~~ily--TSGTTG~PKgV~~sh~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~G~t~vl~~g~ 339 (652)
T TIGR01217 264 DHPLWILF--SSGTTGLPKCIVHSAGGTLVQ--HLKEHGLHCDLGPGDRLFYYTTTGWMMWNWLVSGLATGATLVLYDGS 339 (652)
T ss_pred CCCEEEEE--cCCCCCCCCeEEecccHHHHH--HHHHHHhccCCCCCcEEEEeCCcchhhhHHHHHHHhcCcEEEEECCC
Confidence 55665543 245544433 3454433211 111112235889999888777766543333567888999988765
Q ss_pred CCC-CHHHHHHHHHhcCceEEEEccccHHHH
Q 005991 170 DTL-GPDAVKYVVNHAEIEAIFCIPQTLNTL 199 (666)
Q Consensus 170 ~~~-~~~~l~~~l~~~~~~~vi~~~~~~~~~ 199 (666)
+.+ .++.+..++++.++.++.+.......+
T Consensus 340 ~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l 370 (652)
T TIGR01217 340 PGFPATNVLWDIAERTGATLFGTSAKYVMAC 370 (652)
T ss_pred CCCCCchHHHHHHHHhCCeEEecCHHHHHHH
Confidence 222 467888999999999876655544443
No 170
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=48.23 E-value=37 Score=35.62 Aligned_cols=89 Identities=13% Similarity=0.094 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHh-CCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005991 80 TLHDNFIYAVEN-YPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (666)
Q Consensus 80 tl~~~~~~~a~~-~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~ 158 (666)
...+.|++..+. ...+-|+... .| ...+-..|..+|+++||.|.+- ..-|..+.-|+
T Consensus 25 ~~~~~fE~~~a~~~g~~~~~~~~---sg----------------t~Al~~al~~l~~~~gdeVi~p---~~t~~~~~~ai 82 (363)
T PF01041_consen 25 PYVEEFEKEFAEYFGVKYAVAVS---SG----------------TSALHLALRALGLGPGDEVIVP---AYTFPATASAI 82 (363)
T ss_dssp HHHHHHHHHHHHHHTSSEEEEES---SH----------------HHHHHHHHHHTTGGTTSEEEEE---SSS-THHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEEeC---Ch----------------hHHHHHHHHhcCCCcCceEecC---CCcchHHHHHH
Confidence 345666666444 4555555442 22 2455566677999999999874 55677888899
Q ss_pred HhcCCeEEecCCC-----CCHHHHHHHHHhcCceEEEE
Q 005991 159 SAYSYISVPLYDT-----LGPDAVKYVVNHAEIEAIFC 191 (666)
Q Consensus 159 ~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~ 191 (666)
..+|+.+|.+|-+ +.++.+...+..-. ++|+.
T Consensus 83 ~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~ 119 (363)
T PF01041_consen 83 LWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILV 119 (363)
T ss_dssp HHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEE
T ss_pred HHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEE
Confidence 9999999887544 57788888877443 55554
No 171
>PRK09274 peptide synthase; Provisional
Probab=48.14 E-value=1.4e+02 Score=33.12 Aligned_cols=97 Identities=13% Similarity=0.033 Sum_probs=65.6
Q ss_pred CCCCcEEEEeccCCC-CCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec
Q 005991 254 KPEDIATICYTSGTT-GTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTT-G~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~ 329 (666)
.|+.+|++....+++ +..+-..+|.+.+...+..+... .++.++|++..+++-... .....+.++..|+..+..+
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~-~~~~~la~~~~G~~~v~l~ 97 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLE-FFALTFALFKAGAVPVLVD 97 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHH-HHHHHHHHHHcCeEEEEcC
Confidence 456666654333221 12233368888887766655443 578899999998876533 2333667888999888766
Q ss_pred --CCHHHHHHHHHhhcCeEEeech
Q 005991 330 --GDNLKLMDDLAVLKPTIFPSVP 351 (666)
Q Consensus 330 --~~~~~~~~~i~~~~~t~~~~~P 351 (666)
.....+...++..++..++..+
T Consensus 98 ~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 98 PGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCccHHHHHHHHHhcCCCEEEecc
Confidence 5778888899999999888765
No 172
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=47.98 E-value=2.7e+02 Score=30.07 Aligned_cols=103 Identities=17% Similarity=0.045 Sum_probs=70.9
Q ss_pred CCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh-HHHHHHHHHhcCCeEEecC
Q 005991 93 PDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE-WLIVDHACSAYSYISVPLY 169 (666)
Q Consensus 93 pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~ 169 (666)
++.++++.. ..|+++. ...+|++.+...+.... ...++.++|++...+|-... .+..+++.+..|+..+..+
T Consensus 140 ~~~~a~i~~--TSGtTG~PK~v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~ 214 (483)
T PRK03640 140 LDEVATIMY--TSGTTGKPKGVIQTYGNHWWSAVGSA---LNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE 214 (483)
T ss_pred CCCeEEEEe--CCCcCCCCcEEEEecHHHHHHHHHHH---HhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC
Confidence 455665543 2454443 34678887765443322 33688999999888875332 2334577778899877655
Q ss_pred CCCCHHHHHHHHHhcCceEEEEccccHHHHHH
Q 005991 170 DTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (666)
Q Consensus 170 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 201 (666)
...+.++...+++.++.++...+.....+.+
T Consensus 215 -~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~ 245 (483)
T PRK03640 215 -KFDAEKINKLLQTGGVTIISVVSTMLQRLLE 245 (483)
T ss_pred -CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHh
Confidence 5788999999999999999998887766654
No 173
>PLN03102 acyl-activating enzyme; Provisional
Probab=44.37 E-value=1.5e+02 Score=33.29 Aligned_cols=93 Identities=12% Similarity=0.055 Sum_probs=67.1
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHH-HHHHHHHhCcEEEEec
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERA-NQIVSVYYGVAVGFYQ 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~-~~~~~l~~G~~~~~~~ 329 (666)
.|+.+|.+. .+ -.+|.+.+...+..+... .++.++|++..++|-.- .+. ..+.++..|+.++..+
T Consensus 27 ~p~~~Al~~--~~-------~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~--e~~~~~la~~~~G~~~vpl~ 95 (579)
T PLN03102 27 YPNRTSIIY--GK-------TRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTP--AMYEMHFAVPMAGAVLNPIN 95 (579)
T ss_pred CCCCeEEEE--CC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHHHhcCcEEeecc
Confidence 456676553 11 258888887776655544 57889999999988543 333 3667788888887766
Q ss_pred --CCHHHHHHHHHhhcCeEEeechHHHHHH
Q 005991 330 --GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (666)
Q Consensus 330 --~~~~~~~~~i~~~~~t~~~~~P~~~~~l 357 (666)
.....+...++..+++.++..+.....+
T Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (579)
T PLN03102 96 TRLDATSIAAILRHAKPKILFVDRSFEPLA 125 (579)
T ss_pred ccCCHHHHHHHHhccCCeEEEEChhhHHHH
Confidence 6889999999999999999877655433
No 174
>PRK07787 acyl-CoA synthetase; Validated
Probab=43.08 E-value=4e+02 Score=28.78 Aligned_cols=116 Identities=13% Similarity=0.015 Sum_probs=75.7
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--CHhHHHHHHHHHhcCCeEEe
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLIN--RPEWLIVDHACSAYSYISVP 167 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n--~~e~~~~~lA~~~~G~~~vp 167 (666)
.++.+|++.. ..|.++. ...+|+..+...+..++.. .++.+++++...+|- ...+...+++.+..|+.++.
T Consensus 126 ~~~~~a~i~~--TSGTTG~PK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~ 200 (471)
T PRK07787 126 DPDAPALIVY--TSGTTGPPKGVVLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVH 200 (471)
T ss_pred CCCceEEEEE--CCCCCCCCCEEEEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEe
Confidence 4566666543 2455543 3467888887766555543 467888887666553 23345668888999999886
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhh---hcCCCceEEEE
Q 005991 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI---SEIPSVHLIVV 214 (666)
Q Consensus 168 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~l~~ii~ 214 (666)
.. ...++.+...++ .++..+.+.+.....+.+.. ..++.++.++.
T Consensus 201 ~~-~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~~~~l~~l~~~~~ 248 (471)
T PRK07787 201 TG-RPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEAARALRGARLLVS 248 (471)
T ss_pred cC-CCCHHHHHHHHh-hCceEEEcchHHHHHHHhCccccccccceeEEEE
Confidence 65 467888999999 89998888877665554321 23344555443
No 175
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=41.48 E-value=2.2e+02 Score=32.56 Aligned_cols=93 Identities=16% Similarity=0.116 Sum_probs=66.0
Q ss_pred CCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec--
Q 005991 255 PEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ-- 329 (666)
Q Consensus 255 ~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~-- 329 (666)
++.+|++.-.- ..+ ....+|.+.+...+..+... .++.++|++..++|..-.+ ....+.++..|+..+...
T Consensus 75 ~~~~A~~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~-~~~~lA~~~~Gav~vpl~~~ 150 (647)
T PTZ00237 75 RDQDALIYECP-YLK--KTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEP-LIAMLSCARIGATHCVLFDG 150 (647)
T ss_pred CCceEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeCCC
Confidence 46666554221 111 23568999887766655543 6899999999999976432 334667788888876655
Q ss_pred CCHHHHHHHHHhhcCeEEeech
Q 005991 330 GDNLKLMDDLAVLKPTIFPSVP 351 (666)
Q Consensus 330 ~~~~~~~~~i~~~~~t~~~~~P 351 (666)
..+..+...++..++.+++...
T Consensus 151 ~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 151 YSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCHHHHHHHHHhcCCCEEEEcc
Confidence 6899999999999999998765
No 176
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=41.31 E-value=4.2e+02 Score=28.72 Aligned_cols=104 Identities=11% Similarity=-0.039 Sum_probs=70.2
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH-hHHHHHHHHHhcCCeEEec
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP-EWLIVDHACSAYSYISVPL 168 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~-e~~~~~lA~~~~G~~~vpl 168 (666)
.++.++++.. ..|+++. ...+|++.+...+..+... .++..++++....|... ..+..+++++..|+..+.+
T Consensus 139 ~~~~~~~il~--TSGTTG~PK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~ 213 (502)
T TIGR01734 139 KGDDNYYIIY--TSGSTGNPKGVQISHDNLVSFTNWMLAD---FPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCL 213 (502)
T ss_pred CCCCeEEEEE--CCCCCCCCCEEEEecHHHHHHHHHHHHh---CCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEc
Confidence 3455555443 2454443 3567888887665544433 57788888777766543 2345677889999999887
Q ss_pred CCC--CCHHHHHHHHHhcCceEEEEccccHHHHH
Q 005991 169 YDT--LGPDAVKYVVNHAEIEAIFCIPQTLNTLL 200 (666)
Q Consensus 169 ~~~--~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 200 (666)
++. ..+..+...+...++..+...+.....+.
T Consensus 214 ~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l 247 (502)
T TIGR01734 214 DKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCL 247 (502)
T ss_pred CHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHH
Confidence 654 35678888899999999888877665443
No 177
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=40.68 E-value=2e+02 Score=32.68 Aligned_cols=96 Identities=15% Similarity=0.142 Sum_probs=68.2
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (666)
.|+.+|++... ..+|. .-.+|.+.+...+..+... .++.++|++..++|-.-. .....+.++..|+..+...
T Consensus 70 ~p~~~Al~~~~-~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEG-DEPGE--VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPE-AAIAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEc-CCCCc--eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCCEEeccCC
Confidence 56777766432 21232 4568998887766555443 678899999999986532 2344667888898877665
Q ss_pred -CCHHHHHHHHHhhcCeEEeechHH
Q 005991 330 -GDNLKLMDDLAVLKPTIFPSVPRL 353 (666)
Q Consensus 330 -~~~~~~~~~i~~~~~t~~~~~P~~ 353 (666)
..+..+...++..++.+++.....
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~~ 170 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADEG 170 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCcc
Confidence 688899999999999999887653
No 178
>PRK07470 acyl-CoA synthetase; Validated
Probab=40.43 E-value=5.1e+02 Score=28.38 Aligned_cols=107 Identities=18% Similarity=0.111 Sum_probs=66.8
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEec-
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPL- 168 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl- 168 (666)
.++.++++.. ..|.++. ...+|++.+...+......+. .+..++|++..++|-+..+-...+..+..|+..+.+
T Consensus 161 ~~~~~a~i~~--TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~ 237 (528)
T PRK07470 161 DHDDPCWFFF--TSGTTGRPKAAVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLP 237 (528)
T ss_pred CCCCeEEEEe--CCCCCCCCcEEEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEec
Confidence 3456666554 2454443 356788877543332211111 256788888888886654433334444556555444
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEccccHHHHHH
Q 005991 169 YDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (666)
Q Consensus 169 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 201 (666)
....+++.+...+++.++.+++..+.....+.+
T Consensus 238 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 270 (528)
T PRK07470 238 SERFDPAEVWALVERHRVTNLFTVPTILKMLVE 270 (528)
T ss_pred ccCcCHHHHHHHHHhcCCeEEechHHHHHHHHh
Confidence 446788999999999999999998887766544
No 179
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=40.40 E-value=5e+02 Score=28.58 Aligned_cols=117 Identities=14% Similarity=0.033 Sum_probs=75.4
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEe
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVP 167 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vp 167 (666)
.++.+|++.. ..|.++. ...+|++.+...+.... ...+++.+|++...+|-.. .++...+..+..|+..+.
T Consensus 193 ~~~~~a~i~~--TSGtTG~PK~v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~ 267 (538)
T TIGR03208 193 SPDDVTQLIY--TSGTTGEPKGVMHTANTLFSNIHPYA---ERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVL 267 (538)
T ss_pred CCCCeEEEEE--CCCCCCCCcEEEeehHHHHHHHHHHH---hhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEe
Confidence 4566776543 2455454 34567777665544433 3447788998888887653 345556777778887654
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhh----hcCCCceEEEE
Q 005991 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI----SEIPSVHLIVV 214 (666)
Q Consensus 168 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~l~~ii~ 214 (666)
.+...++.+...+++.++.++...+.....+.... ..++.++.+++
T Consensus 268 -~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 317 (538)
T TIGR03208 268 -QDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLC 317 (538)
T ss_pred -cCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEE
Confidence 45678889999999999999888776655544322 13355665544
No 180
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=40.19 E-value=2.4e+02 Score=30.88 Aligned_cols=103 Identities=11% Similarity=-0.102 Sum_probs=70.7
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh--HHHHHHHHHhcCCeEEe
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE--WLIVDHACSAYSYISVP 167 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~vp 167 (666)
.++.++++.. ..|.++. ...+|++.+...+.... ....+++++|++...++-... +...+++.+..|+..+.
T Consensus 159 ~~~~~a~i~~--TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~ 234 (508)
T TIGR02262 159 QADDPAFWLY--SSGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVL 234 (508)
T ss_pred CCCCcEEEEe--CCCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEE
Confidence 3566666543 2444443 45678887766544322 234588999988877775543 33456777889998887
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEccccHHH
Q 005991 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNT 198 (666)
Q Consensus 168 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 198 (666)
.+....++.+...|++.++.+++..+.....
T Consensus 235 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 265 (508)
T TIGR02262 235 MGERPTPDAVFDRLRRHQPTIFYGVPTLYAA 265 (508)
T ss_pred eCCCCCHHHHHHHHHHHCCcEEecchHHHHH
Confidence 7777788899999999999999998765443
No 181
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=40.00 E-value=3.3e+02 Score=25.67 Aligned_cols=55 Identities=9% Similarity=-0.027 Sum_probs=38.6
Q ss_pred EEEEcCCh--HHHHHHHHHHH-HHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeechHH
Q 005991 299 IYMSYLPL--AHIYERANQIV-SVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRL 353 (666)
Q Consensus 299 ~~l~~~pl--~h~~~~~~~~~-~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~ 353 (666)
+++...+. .|..|...+-. .-..|-.+++.. -.++.+.+.+++.+|+++...-.+
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~ 145 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALM 145 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcccc
Confidence 44444444 68888776443 345677777765 478999999999999987665443
No 182
>PRK06164 acyl-CoA synthetase; Validated
Probab=39.73 E-value=3.1e+02 Score=30.26 Aligned_cols=104 Identities=14% Similarity=0.035 Sum_probs=72.6
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH-hHHHHHHHHHhcCCeEEec
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP-EWLIVDHACSAYSYISVPL 168 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~-e~~~~~lA~~~~G~~~vpl 168 (666)
.++.+++... ..|.++. ...+|.+.+...+..++..+ ++.+++++...+|-.. -.+..+++.+..|+..+..
T Consensus 179 ~~~~~~~i~~--TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 253 (540)
T PRK06164 179 DPDAGALLFT--TSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE 253 (540)
T ss_pred CCCceEEEEE--CCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec
Confidence 3566777654 2454443 34678888876666555544 6789999988887642 2334677888888887765
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEccccHHHHHH
Q 005991 169 YDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (666)
Q Consensus 169 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 201 (666)
+...+..+...|++.++..++..+.....+..
T Consensus 254 -~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~ 285 (540)
T PRK06164 254 -PVFDAARTARALRRHRVTHTFGNDEMLRRILD 285 (540)
T ss_pred -CCCCHHHHHHHHHHhCCeeecCCHHHHHHHHH
Confidence 45678889999999999999988776655543
No 183
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=39.56 E-value=5.4e+02 Score=28.66 Aligned_cols=106 Identities=10% Similarity=-0.100 Sum_probs=69.2
Q ss_pred CCCCceEEEEEeccCccCCc--eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhH-HHHHHHHHhcCCeEEec
Q 005991 92 YPDYKYLGTRVRVDGTVGGY--KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEW-LIVDHACSAYSYISVPL 168 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~~--~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~vpl 168 (666)
.|+.++++.. ..|.++.. ..+|++.+...+..+. .....++.+++++...+|-...+ ....++.+..|+..+..
T Consensus 179 ~~~~~a~i~~--TSGTTG~PKgv~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~ 255 (576)
T PRK05620 179 DETTAAAICY--STGTTGAPKGVVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFP 255 (576)
T ss_pred CccceeEEEE--CCCCCCCCceEEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEec
Confidence 3455566543 24554433 4578877754433322 12235788899988887755432 23456777788887766
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEccccHHHHH
Q 005991 169 YDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLL 200 (666)
Q Consensus 169 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 200 (666)
.+...++.+...+++.++.+++..+.....+.
T Consensus 256 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 287 (576)
T PRK05620 256 GPDLSAPTLAKIIATAMPRVAHGVPTLWIQLM 287 (576)
T ss_pred CCCCCHHHHHHHHHHhcCceeeecCHHHHHHH
Confidence 66778899999999999999998877655443
No 184
>PLN02246 4-coumarate--CoA ligase
Probab=39.41 E-value=2.1e+02 Score=31.66 Aligned_cols=96 Identities=10% Similarity=-0.001 Sum_probs=66.8
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (666)
.|+.++++.. .+ +-.+|+..+...+..+... .++.++|++..+++-.. -.....+.++..|+..+..+
T Consensus 36 ~~~~~a~~~~---~~----~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~ 107 (537)
T PLN02246 36 FSDRPCLIDG---AT----GRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCP-EFVLAFLGASRRGAVTTTANP 107 (537)
T ss_pred CCCCeEEEec---CC----CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCEEEecCCC
Confidence 4667776532 11 2358999887766555443 57889999998877652 22333567788888887766
Q ss_pred -CCHHHHHHHHHhhcCeEEeechHHHHHH
Q 005991 330 -GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (666)
Q Consensus 330 -~~~~~~~~~i~~~~~t~~~~~P~~~~~l 357 (666)
.....+...++..++..++........+
T Consensus 108 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 136 (537)
T PLN02246 108 FYTPAEIAKQAKASGAKLIITQSCYVDKL 136 (537)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccchHHHH
Confidence 5788888999999999988876665544
No 185
>PLN02736 long-chain acyl-CoA synthetase
Probab=39.31 E-value=3.1e+02 Score=31.36 Aligned_cols=103 Identities=10% Similarity=-0.093 Sum_probs=70.4
Q ss_pred CCCCcEEEE--eccCCCCCccEEEecHHHHHHHHhhccc---ccccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEe
Q 005991 254 KPEDIATIC--YTSGTTGTPKGAVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFY 328 (666)
Q Consensus 254 ~~~~~a~i~--~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~ 328 (666)
.|+.+++.. ...|.+|. -..+|.+.+...+..+.. ..++.++|++..++|-.-.+ ....++++..|+.++..
T Consensus 57 ~p~~~al~~~~~~~~~~~~--~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl 133 (651)
T PLN02736 57 FRDYKYLGTRIRVDGTVGE--YKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEW-LIVDHACSAYSYVSVPL 133 (651)
T ss_pred CCCCCeEEEEecCCCCCCC--cEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEe
Confidence 456666532 12333332 244788888776665544 36789999999888765432 22356778889888765
Q ss_pred c--CCHHHHHHHHHhhcCeEEeechHHHHHHHH
Q 005991 329 Q--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYA 359 (666)
Q Consensus 329 ~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 359 (666)
. ..+..+...++..++.+++..+..+..+..
T Consensus 134 ~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~ 166 (651)
T PLN02736 134 YDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLS 166 (651)
T ss_pred ecCCCHHHHHHHHhccCCCEEEECHHHHHHHHH
Confidence 5 688999999999999999998877665543
No 186
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=38.86 E-value=5.3e+02 Score=28.29 Aligned_cols=117 Identities=12% Similarity=0.020 Sum_probs=75.7
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHH---HHHHHHhcCCeEE
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLI---VDHACSAYSYISV 166 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~---~~lA~~~~G~~~v 166 (666)
.++.+|++.. ..|.++. ...+|...+...+.... ...++.++|++...+|-...+-. ..++++..|++.+
T Consensus 181 ~~~~~a~i~~--TSGTTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v 255 (527)
T TIGR02275 181 KSDEVAFFQL--SGGSTGTPKLIPRTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVV 255 (527)
T ss_pred CCCccEEEEe--CCCCCCCCceeeeehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEE
Confidence 4566777543 2454443 35678888766555433 34578889998888876543322 3677888898876
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhh----cCCCceEEEE
Q 005991 167 PLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFIS----EIPSVHLIVV 214 (666)
Q Consensus 167 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~----~~~~l~~ii~ 214 (666)
.. +...+..+...+++.++.+++..+.....+..... .++.++.+++
T Consensus 256 ~~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~ 306 (527)
T TIGR02275 256 LA-PDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQV 306 (527)
T ss_pred EC-CCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEE
Confidence 54 44567788889999999999998877655543321 2344555544
No 187
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=38.37 E-value=4.9e+02 Score=28.82 Aligned_cols=108 Identities=19% Similarity=0.064 Sum_probs=77.4
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--CHhHHHHHHHHHhcCCeEEe
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLIN--RPEWLIVDHACSAYSYISVP 167 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n--~~e~~~~~lA~~~~G~~~vp 167 (666)
.|+.+|++.. ..|+++. ...+|++.+...+..+...+... +.+.|++...+|- ..-+...+++.+..|+..+.
T Consensus 169 ~~~d~a~i~y--TSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~ 245 (534)
T COG0318 169 DPDDLAFLLY--TSGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVL 245 (534)
T ss_pred CCCCEEEEEe--CCCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEe
Confidence 3677777654 2444442 45679998888876666665432 7788887777775 35666678888999999887
Q ss_pred cCC-CCCHHHHHHHHHhcCceEEEEccccHHHHHHh
Q 005991 168 LYD-TLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSF 202 (666)
Q Consensus 168 l~~-~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 202 (666)
..+ .+.++.+...+...++..+...+.....+...
T Consensus 246 ~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~ 281 (534)
T COG0318 246 LSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDN 281 (534)
T ss_pred CCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhC
Confidence 775 68898999999988888887777766665544
No 188
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=37.76 E-value=2.3e+02 Score=32.21 Aligned_cols=96 Identities=13% Similarity=0.088 Sum_probs=68.2
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (666)
.|+.+|++.... .. .....+|.+.+...+..+... .++.++|++..++|-.-.+ ....+.++..|+..+...
T Consensus 80 ~p~~~Al~~~~~-~~--~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~l~~ 155 (637)
T PRK00174 80 RGDKVAIIWEGD-DP--GDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA-AVAMLACARIGAVHSVVFG 155 (637)
T ss_pred CCCCeEEEEECC-CC--CceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEecCC
Confidence 467777764221 11 135678999988776665544 5788999999998865332 334667888898887765
Q ss_pred -CCHHHHHHHHHhhcCeEEeechHH
Q 005991 330 -GDNLKLMDDLAVLKPTIFPSVPRL 353 (666)
Q Consensus 330 -~~~~~~~~~i~~~~~t~~~~~P~~ 353 (666)
..+..+...++..++.+++.....
T Consensus 156 ~~~~~~l~~~l~~~~~~~li~~~~~ 180 (637)
T PRK00174 156 GFSAEALADRIIDAGAKLVITADEG 180 (637)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcCcc
Confidence 678899999999999999876543
No 189
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=36.54 E-value=14 Score=19.02 Aligned_cols=9 Identities=56% Similarity=0.940 Sum_probs=7.1
Q ss_pred Ccccchhhh
Q 005991 442 GYGMTETSC 450 (666)
Q Consensus 442 ~YG~TE~~~ 450 (666)
+||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 699998764
No 190
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=36.17 E-value=1.2e+02 Score=32.03 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=39.7
Q ss_pred HHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCC-----CCHHHHHHHHHhcCceEEEEc
Q 005991 129 GLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDT-----LGPDAVKYVVNHAEIEAIFCI 192 (666)
Q Consensus 129 ~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~~ 192 (666)
.+...++++||.|.+-. +.|.....++...|+.+++++.+ ...+.+...+.. +.++|+..
T Consensus 62 ~l~al~~~pGd~Viv~~---~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 62 AALLLDIQPGDEVIMPS---YTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHHcCCCCcCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 34455789999988744 34555666777889888776533 456677776653 56666543
No 191
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=36.15 E-value=1.3e+02 Score=33.34 Aligned_cols=87 Identities=14% Similarity=0.138 Sum_probs=68.3
Q ss_pred EEEecHHHHHHHHhhccccc-----ccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec--CCHHHHHHHHHhhcCe
Q 005991 273 GAVLTHGNLISNVAGFSLMV-----QFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPT 345 (666)
Q Consensus 273 gV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t 345 (666)
|..+|++.+...+..++..+ ++..+|++...+|-...+ ....++++..|+.+.-.+ .+..++...++.-++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~-~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEF-VELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 78999998887776665542 378899999999976433 223567788888876655 7999999999999999
Q ss_pred EEeechHHHHHHHHH
Q 005991 346 IFPSVPRLYNRIYAG 360 (666)
Q Consensus 346 ~~~~~P~~~~~l~~~ 360 (666)
+++.....+..+...
T Consensus 122 iif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEA 136 (537)
T ss_pred EEEEcCchHHHHHHH
Confidence 999999888887654
No 192
>PRK13383 acyl-CoA synthetase; Provisional
Probab=36.05 E-value=4.9e+02 Score=28.50 Aligned_cols=110 Identities=16% Similarity=0.092 Sum_probs=67.5
Q ss_pred cCccCCceEEeHHHH-HHHHHHHHHHHHhCCCCCCCEEEEEcCCC-HhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHH
Q 005991 105 DGTVGGYKWMTYGEV-SAARKEIGSGLLFHGLQKGVRIGLYLINR-PEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVN 182 (666)
Q Consensus 105 ~~~~~~~~~~Ty~el-~~~~~~lA~~L~~~gv~~gd~V~i~~~n~-~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~ 182 (666)
.|.++..+-+.+... ..........+...++.++|++...+|-. .-.....++.+..|+.+++.. ....+.+...++
T Consensus 183 SGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~ 261 (516)
T PRK13383 183 SGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTHR-HFDAEAALAQAS 261 (516)
T ss_pred CCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEECC-CCCHHHHHHHHH
Confidence 565555443333221 11122223344556889999988777643 222344566778898887654 567888888999
Q ss_pred hcCceEEEEccccHHHHHHhhh------cCCCceEEEEe
Q 005991 183 HAEIEAIFCIPQTLNTLLSFIS------EIPSVHLIVVV 215 (666)
Q Consensus 183 ~~~~~~vi~~~~~~~~~~~~~~------~~~~l~~ii~~ 215 (666)
..++..+...+.....+.+... .++.++.+++-
T Consensus 262 ~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~g 300 (516)
T PRK13383 262 LHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSS 300 (516)
T ss_pred HhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEEC
Confidence 9999999998887766654321 23456655543
No 193
>PRK06839 acyl-CoA synthetase; Validated
Probab=35.76 E-value=2.9e+02 Score=29.90 Aligned_cols=94 Identities=12% Similarity=-0.043 Sum_probs=67.6
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc----cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM----VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~ 329 (666)
.|+.+|++. + +..+|+..+...+..+... .++.+++++...++-... .....+.++..|+..+..+
T Consensus 15 ~p~~~a~~~---~------~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~~~ 84 (496)
T PRK06839 15 HPDRIAIIT---E------EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE-YIVLLFAIAKVECIAVPLN 84 (496)
T ss_pred CCCCeEEEE---C------CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecC
Confidence 456666653 1 3578999887776655543 467889999988876643 2334667788898888766
Q ss_pred --CCHHHHHHHHHhhcCeEEeechHHHHHH
Q 005991 330 --GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (666)
Q Consensus 330 --~~~~~~~~~i~~~~~t~~~~~P~~~~~l 357 (666)
..+..+...++..+++.++..+.....+
T Consensus 85 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 114 (496)
T PRK06839 85 IRLTENELIFQLKDSGTTVLFVEKTFQNMA 114 (496)
T ss_pred cccCHHHHHHHHHhcCceEEEEcHHHHHHH
Confidence 5788888899999999999888765544
No 194
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=35.37 E-value=1.1e+02 Score=26.82 Aligned_cols=45 Identities=9% Similarity=-0.085 Sum_probs=34.4
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCC---CHhHHHHHHHHHhcCCeEEec
Q 005991 124 KEIGSGLLFHGLQKGVRIGLYLIN---RPEWLIVDHACSAYSYISVPL 168 (666)
Q Consensus 124 ~~lA~~L~~~gv~~gd~V~i~~~n---~~e~~~~~lA~~~~G~~~vpl 168 (666)
..++..|.+.|+.+++.|.+++.. +.....+++++-.+|..-|-|
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~i 128 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAI 128 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEE
Confidence 467777888999999999999975 556666777778888664433
No 195
>PRK07514 malonyl-CoA synthase; Validated
Probab=35.14 E-value=2.8e+02 Score=30.16 Aligned_cols=85 Identities=14% Similarity=0.068 Sum_probs=62.2
Q ss_pred EEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEE
Q 005991 273 GAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIF 347 (666)
Q Consensus 273 gV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~ 347 (666)
+..+|...+...+..+... .++.++|++...++-.. -.....+.++..|+..+..+ .....+...++..+++.+
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 104 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALV 104 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEE
Confidence 3468888876665554433 57889999988887653 22333567788898887766 578889999999999999
Q ss_pred eechHHHHHHH
Q 005991 348 PSVPRLYNRIY 358 (666)
Q Consensus 348 ~~~P~~~~~l~ 358 (666)
...+.....+.
T Consensus 105 i~~~~~~~~~~ 115 (504)
T PRK07514 105 VCDPANFAWLS 115 (504)
T ss_pred EEccchhHHHH
Confidence 88887766543
No 196
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=35.13 E-value=5.3e+02 Score=31.75 Aligned_cols=105 Identities=13% Similarity=-0.016 Sum_probs=72.5
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--HhHHHHHHHHHhcCCeEEe
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINR--PEWLIVDHACSAYSYISVP 167 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~--~e~~~~~lA~~~~G~~~vp 167 (666)
.+|.+|++.. ..|.++. ...+|.+.+...+..+.. ..++.++|++...+|-. ..+....++.+..|+..+.
T Consensus 780 ~~~~~a~i~~--TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~ 854 (1146)
T PRK08633 780 KPDDTATIIF--SSGSEGEPKGVMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVY 854 (1146)
T ss_pred CCCCEEEEEE--CCCCCCCCceEEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEE
Confidence 4566776654 2454443 346788887766655443 34678899887766642 2333446777888988887
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEccccHHHHHH
Q 005991 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (666)
Q Consensus 168 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 201 (666)
......++.+...+++.++..+.+.+.....+.+
T Consensus 855 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 888 (1146)
T PRK08633 855 HPDPTDALGIAKLVAKHRATILLGTPTFLRLYLR 888 (1146)
T ss_pred eCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHh
Confidence 7666788999999999999999998877665544
No 197
>PRK05857 acyl-CoA synthetase; Validated
Probab=35.05 E-value=2.1e+02 Score=31.73 Aligned_cols=92 Identities=13% Similarity=0.064 Sum_probs=65.8
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (666)
.|+.+|++.. .| ...+|.+.+...+..+... .++.++|++..+++-...+ +...++++..|+..+..+
T Consensus 27 ~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~-~~~~lA~~~~G~v~v~l~~ 98 (540)
T PRK05857 27 QPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET-YLSVLACAKLGAIAVMADG 98 (540)
T ss_pred CCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEecCc
Confidence 4667766532 22 1458999887776655543 5778999999988766432 334677888999888776
Q ss_pred -CCHHHHHHHHHhhcCeEEeechHH
Q 005991 330 -GDNLKLMDDLAVLKPTIFPSVPRL 353 (666)
Q Consensus 330 -~~~~~~~~~i~~~~~t~~~~~P~~ 353 (666)
.....+...++..++..++..+..
T Consensus 99 ~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 99 NLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred cCCHHHHHHHHHhcCCceEEEeccc
Confidence 578888888888999888877654
No 198
>PRK08316 acyl-CoA synthetase; Validated
Probab=34.98 E-value=2.7e+02 Score=30.38 Aligned_cols=84 Identities=12% Similarity=-0.092 Sum_probs=62.3
Q ss_pred EEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEe
Q 005991 274 AVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFP 348 (666)
Q Consensus 274 V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~ 348 (666)
..+|...+...+...... .++.++|++..++|-... .....+.++..|+..+..+ .....+...++..++..++
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 113 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDA-YALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFL 113 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEE
Confidence 568888877666554433 568889999988876543 3344667888898887766 5788888999999999999
Q ss_pred echHHHHHHH
Q 005991 349 SVPRLYNRIY 358 (666)
Q Consensus 349 ~~P~~~~~l~ 358 (666)
........+.
T Consensus 114 ~~~~~~~~~~ 123 (523)
T PRK08316 114 VDPALAPTAE 123 (523)
T ss_pred EccchHHHHH
Confidence 8887766554
No 199
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=34.51 E-value=2.2e+02 Score=31.53 Aligned_cols=83 Identities=8% Similarity=-0.102 Sum_probs=63.8
Q ss_pred EecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEee
Q 005991 275 VLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPS 349 (666)
Q Consensus 275 ~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~ 349 (666)
.+|.+.+...+..+... .++.+++++..++|-...+ ....+.++..|+..+..+ ....++...++..+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 57888887766655543 5688899999888866543 444677888999888766 58889999999999999999
Q ss_pred chHHHHHHH
Q 005991 350 VPRLYNRIY 358 (666)
Q Consensus 350 ~P~~~~~l~ 358 (666)
.+..+..+.
T Consensus 125 ~~~~~~~~~ 133 (542)
T PRK06155 125 EAALLAALE 133 (542)
T ss_pred ChhhHHHHH
Confidence 887766553
No 200
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=34.26 E-value=5.9e+02 Score=28.02 Aligned_cols=104 Identities=10% Similarity=-0.043 Sum_probs=71.0
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHH---HHHHHHHhcCCeEE
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWL---IVDHACSAYSYISV 166 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~---~~~lA~~~~G~~~v 166 (666)
.++.+|++.. ..|.++. ...+|.+.+...+..... ..++.++|++...+|-...+- ...++++..|+..+
T Consensus 180 ~~~~~a~i~~--TSGTTG~PKgV~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~ 254 (536)
T PRK10946 180 PADEVAFFQL--SGGSTGTPKLIPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVV 254 (536)
T ss_pred CCCCeEEEEe--CCCCCCCCcEEEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEE
Confidence 3456666543 2455443 356788888776665443 457889998888877654332 24678888999887
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHH
Q 005991 167 PLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (666)
Q Consensus 167 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 201 (666)
... ...+......+++.++.++...+.....+..
T Consensus 255 ~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~ 288 (536)
T PRK10946 255 LAP-DPSATLCFPLIEKHQVNVTALVPPAVSLWLQ 288 (536)
T ss_pred ECC-CCCHHHHHHHHHHhCCcEEEeChHHHHHHHh
Confidence 654 4567778888999999999988876665543
No 201
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=34.18 E-value=1.4e+02 Score=31.34 Aligned_cols=58 Identities=12% Similarity=0.056 Sum_probs=39.0
Q ss_pred HHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCC-----CCHHHHHHHHHhcCceEEEE
Q 005991 130 LLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDT-----LGPDAVKYVVNHAEIEAIFC 191 (666)
Q Consensus 130 L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~ 191 (666)
+...++++||.|.+-.+. |.....++...|+.++.++.+ ...+.+...+.. +.++|+.
T Consensus 63 l~~~~~~~Gd~Viv~~~t---~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 63 ALLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred HHHhCCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 334578899998775544 445566777889987776532 467888887754 5666654
No 202
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=34.12 E-value=5.7e+02 Score=27.85 Aligned_cols=104 Identities=13% Similarity=0.075 Sum_probs=74.0
Q ss_pred hCCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcC--CCHhHHHHHHHHHhcCCeEE
Q 005991 91 NYPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLI--NRPEWLIVDHACSAYSYISV 166 (666)
Q Consensus 91 ~~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~--n~~e~~~~~lA~~~~G~~~v 166 (666)
..||.++-+.. ..|.+|. ...+|--.+.+.+..++..+ |+...+++++-.| .+.-.++..+|++..|++.|
T Consensus 231 ~~pdd~~niQF--TSGTTG~PKgatLsH~~~~Nna~~vg~r~---g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~V 305 (596)
T KOG1177|consen 231 LSPDDAVNIQF--TSGTTGAPKGATLSHYNFLNNARAVGARA---GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIV 305 (596)
T ss_pred cCCCCceEEEe--ccCCCCCCcceeeehhhhhhhHHHHHHHh---CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEE
Confidence 45666655543 1344443 45788888888888777654 6665445554433 23455778899999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEccccHHHH
Q 005991 167 PLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTL 199 (666)
Q Consensus 167 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 199 (666)
.-.|.+.+...-..+.+-++.+++..+...-.+
T Consensus 306 fp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dl 338 (596)
T KOG1177|consen 306 FPAPSFDPKDALQAISNEKCTTLYGTPTMFVDL 338 (596)
T ss_pred eeCCCCChHHHHHHHHhhceEEEecChHHHHHH
Confidence 989999999999999999999999887654333
No 203
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=34.05 E-value=32 Score=23.68 Aligned_cols=26 Identities=23% Similarity=0.567 Sum_probs=21.8
Q ss_pred EEEEecCCCCcHHHHHHHHHHhCCcc
Q 005991 414 RFMGSGASPLSPDVMDFLKVCFGCQV 439 (666)
Q Consensus 414 r~i~~gG~~l~~~~~~~~~~~~~~~v 439 (666)
+++.++|.|++.++...++..+|-++
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~~~l 47 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFGKRL 47 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHhhhc
Confidence 56889999999999999988876543
No 204
>PRK13388 acyl-CoA synthetase; Provisional
Probab=33.66 E-value=2.9e+02 Score=30.62 Aligned_cols=82 Identities=7% Similarity=-0.116 Sum_probs=60.9
Q ss_pred EecHHHHHHHHhhcccc---ccc-CCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEe
Q 005991 275 VLTHGNLISNVAGFSLM---VQF-YPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFP 348 (666)
Q Consensus 275 ~~th~~l~~~~~~~~~~---~~~-~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~ 348 (666)
.+|...+...+..+... .++ .++|++..++|-...+ ....+.++..|+..+..+ .....+...++..++..++
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~-v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i 104 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEM-LFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLV 104 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHH-HHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEE
Confidence 67998887776665543 466 6889998888855432 334667888999888766 5788899999999999999
Q ss_pred echHHHHHH
Q 005991 349 SVPRLYNRI 357 (666)
Q Consensus 349 ~~P~~~~~l 357 (666)
........+
T Consensus 105 ~~~~~~~~~ 113 (540)
T PRK13388 105 TDAEHRPLL 113 (540)
T ss_pred EChhhhHHH
Confidence 877665443
No 205
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.48 E-value=2.7e+02 Score=30.74 Aligned_cols=84 Identities=7% Similarity=-0.038 Sum_probs=62.0
Q ss_pred EecHHHHHHHHhhcccc---c-ccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEe
Q 005991 275 VLTHGNLISNVAGFSLM---V-QFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFP 348 (666)
Q Consensus 275 ~~th~~l~~~~~~~~~~---~-~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~ 348 (666)
.+|...+...+..+... . ++.++|++..+++-.- -.+...+.++..|+..+..+ .....+...++..+++.++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 113 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP-QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAI 113 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEE
Confidence 47888887666554433 3 7889999998888553 33344667888899888766 5788899999999999998
Q ss_pred echHHHHHHHH
Q 005991 349 SVPRLYNRIYA 359 (666)
Q Consensus 349 ~~P~~~~~l~~ 359 (666)
..+.....+..
T Consensus 114 ~~~~~~~~~~~ 124 (546)
T PRK08314 114 VGSELAPKVAP 124 (546)
T ss_pred EccchhhhHHH
Confidence 88776655543
No 206
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=33.38 E-value=5.5e+02 Score=32.17 Aligned_cols=121 Identities=9% Similarity=-0.057 Sum_probs=80.7
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHH-HHHHHHhcCCeEEec
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLI-VDHACSAYSYISVPL 168 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~-~~lA~~~~G~~~vpl 168 (666)
.|+.+|++.. ..|.+|. ...+|.+.+...+.... ...++.++|++...++-+.+.-+ .+++.+..|+..+..
T Consensus 596 ~~~~~a~i~~--TSGSTG~PKgV~~~h~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~ 670 (1296)
T PRK10252 596 QPHHTAYIIF--TSGSTGRPKGVMVGQTAIVNRLLWMQ---NHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMA 670 (1296)
T ss_pred CCCCeEEEEE--CCCCCCCCCEEEeccHHHHHHHHHHH---HhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEEC
Confidence 4666666544 2455453 35678777765444333 34588999999988887655433 467788899988876
Q ss_pred CC--CCCHHHHHHHHHhcCceEEEEccccHHHHHHhhh------cCCCceEEEEeCC
Q 005991 169 YD--TLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFIS------EIPSVHLIVVVGG 217 (666)
Q Consensus 169 ~~--~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~------~~~~l~~ii~~~~ 217 (666)
++ ...++.+...+++.++.++...+.....+..... .++.++.+++-++
T Consensus 671 ~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe 727 (1296)
T PRK10252 671 EPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGE 727 (1296)
T ss_pred ChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecC
Confidence 54 4578889999999999999888776655543321 2356776665443
No 207
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=33.26 E-value=78 Score=29.71 Aligned_cols=34 Identities=9% Similarity=0.264 Sum_probs=29.9
Q ss_pred ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 005991 111 YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLY 144 (666)
Q Consensus 111 ~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~ 144 (666)
...+||.++.+.+.++|..+.+.|.+|.-.|+|.
T Consensus 4 ~~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaia 37 (192)
T COG2236 4 KLYVSWEEIHRLCRALAEKIRASGFKPDVIVAIA 37 (192)
T ss_pred eEEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEc
Confidence 3569999999999999999999999998777664
No 208
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=33.11 E-value=3.5e+02 Score=27.02 Aligned_cols=89 Identities=12% Similarity=0.049 Sum_probs=56.3
Q ss_pred HHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCC----CHHHHHHHHHhcCceEEEEcccc-H
Q 005991 122 ARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTL----GPDAVKYVVNHAEIEAIFCIPQT-L 196 (666)
Q Consensus 122 ~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~----~~~~l~~~l~~~~~~~vi~~~~~-~ 196 (666)
|+..||..|++.| -.|..++.+....... .+...|..+..++... ..+++..++++.+++++|+|.-. .
T Consensus 19 Rcl~LA~~l~~~g----~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~~~ 92 (279)
T TIGR03590 19 RCLTLARALHAQG----AEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHYGLD 92 (279)
T ss_pred HHHHHHHHHHHCC----CEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 7889999997754 4677777766554433 3467888777775543 24468888999999999998632 2
Q ss_pred HHHHHhhhcCCCceEEEEeCCC
Q 005991 197 NTLLSFISEIPSVHLIVVVGGK 218 (666)
Q Consensus 197 ~~~~~~~~~~~~l~~ii~~~~~ 218 (666)
....+.... ....++++|+.
T Consensus 93 ~~~~~~~k~--~~~~l~~iDD~ 112 (279)
T TIGR03590 93 ADWEKLIKE--FGRKILVIDDL 112 (279)
T ss_pred HHHHHHHHH--hCCeEEEEecC
Confidence 223332221 13355566653
No 209
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=33.08 E-value=6.1e+02 Score=26.78 Aligned_cols=124 Identities=11% Similarity=0.044 Sum_probs=72.5
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCC--CCEEEEEcCCCH--hHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQK--GVRIGLYLINRP--EWL 152 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~--gd~V~i~~~n~~--e~~ 152 (666)
+++.+.++-..+.+-+..+++.. ..|.++. ...+|++.+...+..++..+ |+.+ .+++..++|-.. .++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~--TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~ 154 (386)
T TIGR02372 80 RRIGEWVDLIAHHSTPTARFTFA--TSGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFL 154 (386)
T ss_pred ccHHHHHHHHHhcCCCCceEEEE--CCCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHH
Confidence 45666666555555455555543 1455443 34569999988888777655 4433 456777777553 334
Q ss_pred HHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhcCCCce
Q 005991 153 IVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVH 210 (666)
Q Consensus 153 ~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~l~ 210 (666)
...+..+..|+.++... ..++..+...++.. .+++..+.....+.+....+++++
T Consensus 155 ~~~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~~~l~slr 209 (386)
T TIGR02372 155 FSCLLPSRRGLEAKQLA-AAPASGIMRHARPG--DLIVGTPFIWEQLADLDYRLPGVV 209 (386)
T ss_pred HHHHHHHHCCCeEEecC-CCChHHHHHhhccC--CEEEECcHHHHHHHhhCcCCCcce
Confidence 45566777898887665 45555555444432 566666766665544322344444
No 210
>PRK07798 acyl-CoA synthetase; Validated
Probab=32.69 E-value=3.3e+02 Score=29.79 Aligned_cols=84 Identities=11% Similarity=-0.123 Sum_probs=60.0
Q ss_pred EEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEe
Q 005991 274 AVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFP 348 (666)
Q Consensus 274 V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~ 348 (666)
-.+|...+...+..+... .++.++|++..+++-.-. .....+.++..|+..+..+ .....+...++..++..++
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~ 105 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIE-YVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALV 105 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEE
Confidence 358888876666554443 568889998888765432 2233567788888888766 5788889999999999998
Q ss_pred echHHHHHHH
Q 005991 349 SVPRLYNRIY 358 (666)
Q Consensus 349 ~~P~~~~~l~ 358 (666)
........+.
T Consensus 106 ~~~~~~~~~~ 115 (533)
T PRK07798 106 YEREFAPRVA 115 (533)
T ss_pred EchhhHHHHH
Confidence 8876655543
No 211
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=32.23 E-value=3.6e+02 Score=29.44 Aligned_cols=99 Identities=10% Similarity=-0.088 Sum_probs=68.1
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccc---ccccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (666)
.|+.+|++.-.. .|.. -.+|...+...+..+.. ..++.++|++..+.|-...+ ....+.++..|+..+..+
T Consensus 20 ~p~~~a~~~~~~--~~~~--~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~-~~~~la~~~~G~~~v~l~~ 94 (517)
T PRK08008 20 YGHKTALIFESS--GGVV--RRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEF-IFCWFGLAKIGAIMVPINA 94 (517)
T ss_pred CCCceEEEcccC--CCcc--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEEcCc
Confidence 466677654221 1211 24788877666655443 35788999999988766533 234567888898887765
Q ss_pred -CCHHHHHHHHHhhcCeEEeechHHHHHH
Q 005991 330 -GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (666)
Q Consensus 330 -~~~~~~~~~i~~~~~t~~~~~P~~~~~l 357 (666)
..+..+...++..++..++..+.....+
T Consensus 95 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 95 RLLREESAWILQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred ccCHHHHHHHHHhcCceEEEEecchhHHH
Confidence 6888999999999999999888765433
No 212
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=31.98 E-value=7.5e+02 Score=30.48 Aligned_cols=118 Identities=10% Similarity=-0.027 Sum_probs=76.4
Q ss_pred CCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEe
Q 005991 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVP 167 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vp 167 (666)
.||.+|.+.. ..|.++. ...+|.+.+...+..... ..++.++|++...+|-.. .+....+..+..|+..+.
T Consensus 791 ~~~d~a~i~~--TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~ 865 (1140)
T PRK06814 791 DPDDPAVILF--TSGSEGTPKGVVLSHRNLLANRAQVAA---RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFL 865 (1140)
T ss_pred CCCCcEEEEE--CCCccCCCcEEEecHHHHHHHHHHHHH---hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEE
Confidence 4566766544 2455453 346788888766665554 346789999888877532 333556777788988876
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhh--cCCCceEEEE
Q 005991 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFIS--EIPSVHLIVV 214 (666)
Q Consensus 168 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--~~~~l~~ii~ 214 (666)
.+.....+.+...+++.++..+...+.....+..... .++.++.++.
T Consensus 866 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~lr~v~~ 914 (1140)
T PRK06814 866 YPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAHPYDFRSLRYVFA 914 (1140)
T ss_pred ecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcccccccceeEEEE
Confidence 6655556677888899999999988776555443221 2344555443
No 213
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=31.96 E-value=6.4e+02 Score=27.41 Aligned_cols=107 Identities=16% Similarity=0.061 Sum_probs=62.8
Q ss_pred CCCCceEEEEEeccCccCCceEE--eHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH-hHHHHHHHHHhcCCeEEec
Q 005991 92 YPDYKYLGTRVRVDGTVGGYKWM--TYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP-EWLIVDHACSAYSYISVPL 168 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~~~~~--Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~-e~~~~~lA~~~~G~~~vpl 168 (666)
.++.++++.. ..|.++..+-+ |..................++.+++++...++-.. ......+..+..|+..+..
T Consensus 150 ~~~~~a~i~~--TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~ 227 (509)
T PRK12406 150 PVPQPQSMIY--TSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQ 227 (509)
T ss_pred CCCCceEEEE--CCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEc
Confidence 3456666543 25555544333 22222222222222223457889998877766432 1222334456677776654
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEccccHHHHHH
Q 005991 169 YDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (666)
Q Consensus 169 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 201 (666)
+...++.+..++++.++.+++..+.....+..
T Consensus 228 -~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~ 259 (509)
T PRK12406 228 -PRFDPEELLQLIERHRITHMHMVPTMFIRLLK 259 (509)
T ss_pred -cCCCHHHHHHHHHHcCCeEEEccHHHHHHHHh
Confidence 45788999999999999999998877655543
No 214
>PRK07529 AMP-binding domain protein; Validated
Probab=31.49 E-value=2.8e+02 Score=31.58 Aligned_cols=95 Identities=13% Similarity=0.092 Sum_probs=63.7
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (666)
.|+.+|++.+..+.. ..++..+|.+.+...+..+... .++.++|++..++|-...+ ....+.++..|.. +..+
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi~-~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET-HFALWGGEAAGIA-NPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCEE-EeCCC
Confidence 467777766543321 1234678998887666655443 5788999999999865432 2335556667743 3333
Q ss_pred -CCHHHHHHHHHhhcCeEEeech
Q 005991 330 -GDNLKLMDDLAVLKPTIFPSVP 351 (666)
Q Consensus 330 -~~~~~~~~~i~~~~~t~~~~~P 351 (666)
..+..+...++..++..++...
T Consensus 115 ~~~~~~i~~~l~~~~~~~li~~~ 137 (632)
T PRK07529 115 LLEPEQIAELLRAAGAKVLVTLG 137 (632)
T ss_pred cCCHHHHHHHHHhcCCcEEEEeC
Confidence 5888999999999999988853
No 215
>PRK13391 acyl-CoA synthetase; Provisional
Probab=30.91 E-value=3.7e+02 Score=29.33 Aligned_cols=96 Identities=10% Similarity=0.014 Sum_probs=68.4
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (666)
.|+.++.+...+| -.+|...+...+..+... .++.+++++..+.+-...+ +...+.++..|+..+..+
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~-~~~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY-LEVCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhccEEecccc
Confidence 4667776665443 248888876665554443 5678899998887765432 334667788898888766
Q ss_pred -CCHHHHHHHHHhhcCeEEeechHHHHHH
Q 005991 330 -GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (666)
Q Consensus 330 -~~~~~~~~~i~~~~~t~~~~~P~~~~~l 357 (666)
.....+...++..++..+...+.....+
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDVA 110 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHHH
Confidence 5788899999999999998888766544
No 216
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=30.76 E-value=5.3e+02 Score=28.94 Aligned_cols=101 Identities=13% Similarity=-0.106 Sum_probs=67.2
Q ss_pred CCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh--HHHHHHHHHhcCCeEEec
Q 005991 93 PDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE--WLIVDHACSAYSYISVPL 168 (666)
Q Consensus 93 pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl 168 (666)
++.+|++.. ..|.++. ...+|.+.+...+..+... .++.++|++...+|-... ++..+++.+..|+..+.
T Consensus 198 ~~~~a~il~--TSGTTG~PKgV~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~- 271 (600)
T PRK08279 198 AKDTAFYIY--TSGTTGLPKAAVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL- 271 (600)
T ss_pred ccccEEEEE--cCCCCCCCcEEEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-
Confidence 355565543 2455443 3567888887776665544 578899999888876543 33445566667776654
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEccccHHHH
Q 005991 169 YDTLGPDAVKYVVNHAEIEAIFCIPQTLNTL 199 (666)
Q Consensus 169 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 199 (666)
.+...+..+...+.+.++.++...+.....+
T Consensus 272 ~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l 302 (600)
T PRK08279 272 RRKFSASRFWDDVRRYRATAFQYIGELCRYL 302 (600)
T ss_pred cCCCCHHHHHHHHHHhcceEEeehHHHHHHH
Confidence 5567788888889999999888766554443
No 217
>PLN02565 cysteine synthase
Probab=30.67 E-value=3.7e+02 Score=27.64 Aligned_cols=72 Identities=10% Similarity=-0.004 Sum_probs=51.6
Q ss_pred HHHHHHHHHhCCC-CCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccc
Q 005991 123 RKEIGSGLLFHGL-QKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQ 194 (666)
Q Consensus 123 ~~~lA~~L~~~gv-~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 194 (666)
+..+-..+.+.|. .+|....+....+---+...++|..+|..++.+-|...+......++..+++++++++.
T Consensus 50 A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 50 GYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred HHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 3333444445564 78865445555666666677788889998887777777778888999999999999853
No 218
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=30.43 E-value=2.6e+02 Score=30.99 Aligned_cols=96 Identities=10% Similarity=0.149 Sum_probs=67.7
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (666)
.|+.+|.+.... | ..+|++.+...+..+... .++.++|++..++|-...+ ....+.++..|+..+..+
T Consensus 41 ~p~~~a~~~~~~---~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~ 112 (546)
T PLN02330 41 YADKVAFVEAVT---G----KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANP 112 (546)
T ss_pred CCCccEEEecCC---C----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCc
Confidence 466777653221 2 368999887776655443 5678899999888766433 234667888899877665
Q ss_pred -CCHHHHHHHHHhhcCeEEeechHHHHHH
Q 005991 330 -GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (666)
Q Consensus 330 -~~~~~~~~~i~~~~~t~~~~~P~~~~~l 357 (666)
.....+...++..++..++..+..+..+
T Consensus 113 ~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 141 (546)
T PLN02330 113 TALESEIKKQAEAAGAKLIVTNDTNYGKV 141 (546)
T ss_pred cCCHHHHHHHHHhcCCeEEEEccchhhhH
Confidence 5778889999999999998887766544
No 219
>PLN02574 4-coumarate--CoA ligase-like
Probab=29.99 E-value=3.7e+02 Score=29.92 Aligned_cols=96 Identities=14% Similarity=0.092 Sum_probs=66.5
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccc---c-cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL---M-VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~-~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~ 329 (666)
.++.++++. +.+|. .+|.+.+...+..+.. . .++.++|++..+++-... .....+.++..|+..+..+
T Consensus 52 ~~~~~a~~~---~~~~~----~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~-~~~~~la~~~~G~v~v~l~ 123 (560)
T PLN02574 52 HNGDTALID---SSTGF----SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVY-FPVIFLAVLSLGGIVTTMN 123 (560)
T ss_pred cCCCCEEEE---CCCCC----cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcch-HHHHHHHHHHhCeEEeCcC
Confidence 456667664 22232 4688877665554433 2 568899999999885532 2334567888998887766
Q ss_pred --CCHHHHHHHHHhhcCeEEeechHHHHHH
Q 005991 330 --GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (666)
Q Consensus 330 --~~~~~~~~~i~~~~~t~~~~~P~~~~~l 357 (666)
....++...++..++..++..+.....+
T Consensus 124 p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 124 PSSSLGEIKKRVVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred cccCHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 5788889999999999998887765554
No 220
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=29.58 E-value=2.7e+02 Score=21.74 Aligned_cols=64 Identities=20% Similarity=0.227 Sum_probs=50.9
Q ss_pred EeHHHHHHHHHHHHH---HHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceE
Q 005991 114 MTYGEVSAARKEIGS---GLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEA 188 (666)
Q Consensus 114 ~Ty~el~~~~~~lA~---~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 188 (666)
.||+||.+.-..++. +|....++..|.|+|+.-++.. ..-++.|+...+.++++.-+++.++++
T Consensus 10 ~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~-----------Sy~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 10 ATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTS-----------SYYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred eeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCce-----------eEEEEEEeccCCHHHHHHHHHHhCchh
Confidence 799999998876665 5556678888999999877653 334577888889999999999988775
No 221
>PRK06060 acyl-CoA synthetase; Validated
Probab=29.54 E-value=5.2e+02 Score=29.78 Aligned_cols=121 Identities=12% Similarity=-0.049 Sum_probs=76.4
Q ss_pred CCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEec
Q 005991 93 PDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVPL 168 (666)
Q Consensus 93 pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl 168 (666)
++.+|++.. ..|.++. ...+|.+.+...+..+.. ...++.++|++....+-.. .+...++..+..|+..+..
T Consensus 144 ~~~~a~il~--TSGSTG~PKgV~~sh~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~ 219 (705)
T PRK06060 144 GDALAYATY--TSGTTGPPKAAIHRHADPLTFVDAMCR--KALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVIN 219 (705)
T ss_pred CCCeEEEEE--CCCCCCCCcEEEEccccHHHHHHHHHH--HhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEe
Confidence 455665543 2555554 345677777665544332 2346778887766655332 2233456778889888776
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhh--hcCCCceEEEEeCC
Q 005991 169 YDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI--SEIPSVHLIVVVGG 217 (666)
Q Consensus 169 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~--~~~~~l~~ii~~~~ 217 (666)
+....++.+..+++..++.++.+.+.....+.+.. ..++.++.++.-++
T Consensus 220 ~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~slr~i~~gGe 270 (705)
T PRK06060 220 SAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSPDSFRSLRCVVSAGE 270 (705)
T ss_pred CCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcccccccceeEEEEecC
Confidence 66677888888999999999998887766554432 13456776665443
No 222
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=29.40 E-value=3.3e+02 Score=30.20 Aligned_cols=92 Identities=14% Similarity=0.071 Sum_probs=65.4
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (666)
.|+.++++.. +..+|...+...+..+... .++.++|++..+++-...+ ....+.++..|+..+..+
T Consensus 36 ~p~~~a~~~~---------~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~-~~~~la~~~~G~~~v~v~~ 105 (557)
T PRK07059 36 YADRPAFICM---------GKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQY-PVAIAAVLRAGYVVVNVNP 105 (557)
T ss_pred cCCCceEEEc---------CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCeEEeccCc
Confidence 3566666541 2468999987776655543 5788899998887765432 334577888899888665
Q ss_pred -CCHHHHHHHHHhhcCeEEeechHHHH
Q 005991 330 -GDNLKLMDDLAVLKPTIFPSVPRLYN 355 (666)
Q Consensus 330 -~~~~~~~~~i~~~~~t~~~~~P~~~~ 355 (666)
.....+...++..+++.++.......
T Consensus 106 ~~~~~~~~~~~~~~~~~~vi~~~~~~~ 132 (557)
T PRK07059 106 LYTPRELEHQLKDSGAEAIVVLENFAT 132 (557)
T ss_pred ccCHHHHHHHHHccCceEEEEchhhHH
Confidence 57888999999999999887765543
No 223
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=29.26 E-value=3.4e+02 Score=30.24 Aligned_cols=92 Identities=15% Similarity=0.110 Sum_probs=66.0
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc----cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM----VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~ 329 (666)
.|+.+|.+. . +..+|.+.+...+..+... .++.++|++..++|-...+ ....+.++..|+..+..+
T Consensus 37 ~p~~~al~~--~-------~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~-~~~~la~~~~Ga~~v~l~ 106 (562)
T PRK05677 37 FADKPAFSN--L-------GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY-PVAVFGAMRAGLIVVNTN 106 (562)
T ss_pred CCCCeeEEE--C-------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeecC
Confidence 456666653 1 2358999887777666543 3678999999988865432 333667788898887765
Q ss_pred --CCHHHHHHHHHhhcCeEEeechHHHH
Q 005991 330 --GDNLKLMDDLAVLKPTIFPSVPRLYN 355 (666)
Q Consensus 330 --~~~~~~~~~i~~~~~t~~~~~P~~~~ 355 (666)
....++...++..++..++.......
T Consensus 107 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 134 (562)
T PRK05677 107 PLYTAREMEHQFNDSGAKALVCLANMAH 134 (562)
T ss_pred CCCCHHHHHHHHhccCceEEEEecchhh
Confidence 67888999999999999987665544
No 224
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=29.03 E-value=4e+02 Score=23.40 Aligned_cols=45 Identities=9% Similarity=-0.076 Sum_probs=34.1
Q ss_pred HHHHHHHHHH-HHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEeech
Q 005991 307 AHIYERANQI-VSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVP 351 (666)
Q Consensus 307 ~h~~~~~~~~-~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P 351 (666)
.|..|...+. ..-..|..+++.. -.++++.+.+.+++|+++...-
T Consensus 15 ~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 15 CHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 4788876643 3346788888776 5789999999999999876653
No 225
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=28.80 E-value=5.8e+02 Score=26.51 Aligned_cols=54 Identities=13% Similarity=-0.034 Sum_probs=32.1
Q ss_pred CCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecC--C--CCCHHHHHHHHHhcCceEEEEc
Q 005991 136 QKGVRIGLYLINRPEWLIVDHACSAYSYISVPLY--D--TLGPDAVKYVVNHAEIEAIFCI 192 (666)
Q Consensus 136 ~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~--~--~~~~~~l~~~l~~~~~~~vi~~ 192 (666)
++||.|.+..|.=..+. .++...|..++++. . ....+.+...++..++++++..
T Consensus 110 ~~gd~v~v~~P~y~~~~---~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~ 167 (368)
T PRK03317 110 GPGRTALGFVPSYSMHP---IIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLT 167 (368)
T ss_pred CCCCEEEEeCCChHHHH---HHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEe
Confidence 57888887665443333 34456676666653 2 3455777777765566665543
No 226
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=28.61 E-value=8.2e+02 Score=26.90 Aligned_cols=98 Identities=15% Similarity=-0.060 Sum_probs=64.3
Q ss_pred CCCCceEEEEEeccCccCCc--eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh--HHHHHHHHHhcCCeEEe
Q 005991 92 YPDYKYLGTRVRVDGTVGGY--KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE--WLIVDHACSAYSYISVP 167 (666)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~~--~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~~~vp 167 (666)
.++.++++.. ..|.++.. ..+|+..+...+.. .....++.++|++...++-... +...+++.+..|+..+.
T Consensus 185 ~~~d~a~i~~--TSGTTG~PK~v~~t~~~l~~~~~~---~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~ 259 (547)
T PRK06087 185 HGDELAAVLF--TSGTEGLPKGVMLTHNNILASERA---YCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVL 259 (547)
T ss_pred CCCCeEEEEe--CCCCCCCCcEEEEecHHHHHHHHH---HHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEe
Confidence 3455666543 24444433 35677776655433 3334578899988877775432 44567777888988887
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEcccc
Q 005991 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQT 195 (666)
Q Consensus 168 l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 195 (666)
.. ...++++...+++.++..++.....
T Consensus 260 ~~-~~~~~~~~~~i~~~~~t~~~~~~~~ 286 (547)
T PRK06087 260 LD-IFTPDACLALLEQQRCTCMLGATPF 286 (547)
T ss_pred cC-CCCHHHHHHHHHHcCCCEEeccHHH
Confidence 65 4577888889999999988865443
No 227
>PRK13382 acyl-CoA synthetase; Provisional
Probab=28.27 E-value=6.6e+02 Score=27.66 Aligned_cols=93 Identities=10% Similarity=0.059 Sum_probs=61.9
Q ss_pred cCccCCc--eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhH-HHHHHHHHhcCCeEEecCCCCCHHHHHHHH
Q 005991 105 DGTVGGY--KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEW-LIVDHACSAYSYISVPLYDTLGPDAVKYVV 181 (666)
Q Consensus 105 ~~~~~~~--~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l 181 (666)
.|.++.. ..+|+.-+...+ ...+...++.+++++....|-...+ +...++.+..|++.+. .....++.+...|
T Consensus 205 SGTTG~PKgv~~s~~~~~~~~---~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~~-~~~~~~~~~~~~i 280 (537)
T PRK13382 205 SGTTGTPKGARRSGPGGIGTL---KAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAASLACTIVT-RRRFDPEATLDLI 280 (537)
T ss_pred CCCCCCCCEEEeccchHHHHH---HHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHHhcCcEEEE-CCCcCHHHHHHHH
Confidence 5555543 345554444333 3344455778889887666654332 2345677778888765 4577889999999
Q ss_pred HhcCceEEEEccccHHHHHH
Q 005991 182 NHAEIEAIFCIPQTLNTLLS 201 (666)
Q Consensus 182 ~~~~~~~vi~~~~~~~~~~~ 201 (666)
++.++.++...+.....+..
T Consensus 281 ~~~~vt~~~~~P~~~~~l~~ 300 (537)
T PRK13382 281 DRHRATGLAVVPVMFDRIMD 300 (537)
T ss_pred HHhCCEEEEehHHHHHHHHc
Confidence 99999999998887666544
No 228
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=27.98 E-value=2.2e+02 Score=29.95 Aligned_cols=63 Identities=14% Similarity=0.189 Sum_probs=41.3
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCC-----CCHHHHHHHHHhcCceEEE
Q 005991 124 KEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDT-----LGPDAVKYVVNHAEIEAIF 190 (666)
Q Consensus 124 ~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi 190 (666)
..+...|...++++||.|.+-.+ .|.....++...|+.++.++.. ...+.+...+.. +.++|+
T Consensus 59 ~al~lal~al~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 59 AGMHITLMALGIGPGDEVITPSL---TWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHHcCCCCCCEEEECCC---cHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 34445556667899998876443 4555556777889888766432 467788887753 556665
No 229
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=27.88 E-value=6.1e+02 Score=25.15 Aligned_cols=88 Identities=17% Similarity=0.095 Sum_probs=55.7
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHH--HHHHHHHHHHhCCCCCCCEEEEEcCCC--HhHHHH
Q 005991 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSA--ARKEIGSGLLFHGLQKGVRIGLYLINR--PEWLIV 154 (666)
Q Consensus 79 ~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~--~~~~lA~~L~~~gv~~gd~V~i~~~n~--~e~~~~ 154 (666)
..+.+++.+..+.+++.+.+. +||-...- -.+++...+.+.|+ =+++.|.- .|.--.
T Consensus 72 ~~~~~~~~~ir~~~~~~pivl--------------m~Y~N~i~~~G~e~F~~~~~~aGv-----dGlIipDLP~ee~~~~ 132 (259)
T PF00290_consen 72 EKIFELVKEIRKKEPDIPIVL--------------MTYYNPIFQYGIERFFKEAKEAGV-----DGLIIPDLPPEESEEL 132 (259)
T ss_dssp HHHHHHHHHHHHHCTSSEEEE--------------EE-HHHHHHH-HHHHHHHHHHHTE-----EEEEETTSBGGGHHHH
T ss_pred HHHHHHHHHHhccCCCCCEEE--------------EeeccHHhccchHHHHHHHHHcCC-----CEEEEcCCChHHHHHH
Confidence 344555555555778888663 77776433 36788888888774 45666654 234444
Q ss_pred HHHHHhcCCeEEec-CCCCCHHHHHHHHHhcC
Q 005991 155 DHACSAYSYISVPL-YDTLGPDAVKYVVNHAE 185 (666)
Q Consensus 155 ~lA~~~~G~~~vpl-~~~~~~~~l~~~l~~~~ 185 (666)
.-+|.+.|..++++ .|+.+.+++..+.+.+.
T Consensus 133 ~~~~~~~gl~~I~lv~p~t~~~Ri~~i~~~a~ 164 (259)
T PF00290_consen 133 REAAKKHGLDLIPLVAPTTPEERIKKIAKQAS 164 (259)
T ss_dssp HHHHHHTT-EEEEEEETTS-HHHHHHHHHH-S
T ss_pred HHHHHHcCCeEEEEECCCCCHHHHHHHHHhCC
Confidence 45677889888865 77788888888877653
No 230
>PLN00175 aminotransferase family protein; Provisional
Probab=27.70 E-value=7.6e+02 Score=26.23 Aligned_cols=53 Identities=13% Similarity=0.086 Sum_probs=30.2
Q ss_pred CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEec--CC---CCCHHHHHHHHHhcCceEEEE
Q 005991 135 LQKGVRIGLYLINRPEWLIVDHACSAYSYISVPL--YD---TLGPDAVKYVVNHAEIEAIFC 191 (666)
Q Consensus 135 v~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl--~~---~~~~~~l~~~l~~~~~~~vi~ 191 (666)
+.+||.|.+..|.-.. ..-++...|+.++++ ++ ....+.+...+.. +.++++.
T Consensus 136 ~~~gd~Vlv~~P~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~-~~k~i~i 193 (413)
T PLN00175 136 INPGDEVILFAPFYDS---YEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTS-KTRAILI 193 (413)
T ss_pred CCCCCEEEEeCCCchh---HHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCc-CceEEEe
Confidence 4688888887654333 333445567655444 32 3456677766643 4566654
No 231
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=27.26 E-value=4.7e+02 Score=29.60 Aligned_cols=95 Identities=18% Similarity=0.198 Sum_probs=66.0
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccc---ccccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (666)
.|+.+|++. .+..+|. .-.+|.+.+...+..+.. ..++.++|++..++|-.-. .....+.++..|+..+...
T Consensus 66 ~p~~~A~~~-~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 66 RPEQLALIA-VSTETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAE-AAFAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCCeEEEE-EcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEeeCC
Confidence 456777654 3322332 346788888766655443 3678999999999986532 2334667788898877655
Q ss_pred -CCHHHHHHHHHhhcCeEEeechH
Q 005991 330 -GDNLKLMDDLAVLKPTIFPSVPR 352 (666)
Q Consensus 330 -~~~~~~~~~i~~~~~t~~~~~P~ 352 (666)
.....+...++..++.+++....
T Consensus 142 ~~~~~~l~~~l~~~~~~~li~~~~ 165 (629)
T PRK10524 142 GFASHSLAARIDDAKPVLIVSADA 165 (629)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccC
Confidence 68888999999999999887653
No 232
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=27.17 E-value=6e+02 Score=26.70 Aligned_cols=62 Identities=6% Similarity=-0.008 Sum_probs=46.4
Q ss_pred hCC-CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEcc
Q 005991 132 FHG-LQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIP 193 (666)
Q Consensus 132 ~~g-v~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 193 (666)
+.| ++||....|....+---+.+.++|...|.-+..+-|...+.+-...++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 344 67885444446666777777788899998877776666666678899999999999974
No 233
>PRK09088 acyl-CoA synthetase; Validated
Probab=27.16 E-value=4.3e+02 Score=28.55 Aligned_cols=92 Identities=12% Similarity=0.023 Sum_probs=64.4
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (666)
.|+.++++....| ..+|...+...+..+... .++.++|++..++|-...+ +...+.++..|+..+..+
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~~~~ 79 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL-VALHFACARVGAIYVPLNW 79 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEeeCc
Confidence 4566665543333 358888887666554433 5678899999888766542 333567888888887766
Q ss_pred -CCHHHHHHHHHhhcCeEEeechHH
Q 005991 330 -GDNLKLMDDLAVLKPTIFPSVPRL 353 (666)
Q Consensus 330 -~~~~~~~~~i~~~~~t~~~~~P~~ 353 (666)
.....+...++..+++.++.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~ii~~~~~ 104 (488)
T PRK09088 80 RLSASELDALLQDAEPRLLLGDDAV 104 (488)
T ss_pred cCCHHHHHHHHHhCCCCEEEEcchh
Confidence 578888899999999998876543
No 234
>KOG0331 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=27.02 E-value=2.7e+02 Score=30.63 Aligned_cols=88 Identities=9% Similarity=0.129 Sum_probs=51.6
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhc---CceEEEEccccHHHHH
Q 005991 124 KEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHA---EIEAIFCIPQTLNTLL 200 (666)
Q Consensus 124 ~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~---~~~~vi~~~~~~~~~~ 200 (666)
.++-.-|....-.++.+|.|++..-...--+....-+-|.-+++|+-..+..+-...|+.. +..++|+.+-.+.-+
T Consensus 327 ~~l~~lL~~~~~~~~~KvIIFc~tkr~~~~l~~~l~~~~~~a~~iHGd~sQ~eR~~~L~~FreG~~~vLVATdVAaRGL- 405 (519)
T KOG0331|consen 327 RKLGKLLEDISSDSEGKVIIFCETKRTCDELARNLRRKGWPAVAIHGDKSQSERDWVLKGFREGKSPVLVATDVAARGL- 405 (519)
T ss_pred HHHHHHHHHHhccCCCcEEEEecchhhHHHHHHHHHhcCcceeeecccccHHHHHHHHHhcccCCcceEEEcccccccC-
Confidence 3444444443334556888888766555555555555566777888888887777777654 456666654322111
Q ss_pred HhhhcCCCceEEEEeC
Q 005991 201 SFISEIPSVHLIVVVG 216 (666)
Q Consensus 201 ~~~~~~~~l~~ii~~~ 216 (666)
.+|.++.+|-+|
T Consensus 406 ----Di~dV~lVInyd 417 (519)
T KOG0331|consen 406 ----DVPDVDLVINYD 417 (519)
T ss_pred ----CCccccEEEeCC
Confidence 456666666443
No 235
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=26.85 E-value=2.2e+02 Score=30.71 Aligned_cols=57 Identities=11% Similarity=0.048 Sum_probs=38.1
Q ss_pred hCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCC-----CCHHHHHHHHHhcCceEEEEc
Q 005991 132 FHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDT-----LGPDAVKYVVNHAEIEAIFCI 192 (666)
Q Consensus 132 ~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~~ 192 (666)
+.++++||.|.+-.+ .|.....++...|+.+++++.. ...+.+...+.. +.++|++.
T Consensus 105 ~~~~~pGd~VIv~~~---t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 105 DRALKPGDEVITVAA---GFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred ccCCCCCCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 348899999877544 3455566777889988766442 357778777753 55666654
No 236
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=26.34 E-value=2.6e+02 Score=22.73 Aligned_cols=52 Identities=12% Similarity=0.067 Sum_probs=37.1
Q ss_pred EEeHHHHHHH----HHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCe
Q 005991 113 WMTYGEVSAA----RKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYI 164 (666)
Q Consensus 113 ~~Ty~el~~~----~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~ 164 (666)
.+.+.++.+. ...+...+...++.+++.|.++|.++.....+...+...|.-
T Consensus 37 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 37 NIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 3556665432 235666677778888889999999988777777777888864
No 237
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=26.33 E-value=3.7e+02 Score=29.21 Aligned_cols=82 Identities=10% Similarity=-0.057 Sum_probs=60.5
Q ss_pred EecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEee
Q 005991 275 VLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPS 349 (666)
Q Consensus 275 ~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~ 349 (666)
.+|...+...+...... .++.++|++..+.+-... .....+.++..|+..+..+ .....+...++..+++.++.
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPE-FFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 47777776555544433 568899999998876633 3444677888999888766 57788888999999999988
Q ss_pred chHHHHHH
Q 005991 350 VPRLYNRI 357 (666)
Q Consensus 350 ~P~~~~~l 357 (666)
.+.....+
T Consensus 90 ~~~~~~~~ 97 (502)
T PRK08276 90 SAALADTA 97 (502)
T ss_pred ccchhhHH
Confidence 88766554
No 238
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=26.19 E-value=2.9e+02 Score=28.96 Aligned_cols=65 Identities=14% Similarity=0.032 Sum_probs=42.6
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCC-----CCCHHHHHHHHHh---cCceEEEE
Q 005991 124 KEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYD-----TLGPDAVKYVVNH---AEIEAIFC 191 (666)
Q Consensus 124 ~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~-----~~~~~~l~~~l~~---~~~~~vi~ 191 (666)
..+...+...++++||.|.+-.+. +.....++...|+.++.++. ....+.+...+++ .+.++|+.
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 445555566678999998776543 44455667788987766543 2467888888863 35566653
No 239
>PLN02479 acetate-CoA ligase
Probab=25.74 E-value=5.3e+02 Score=28.69 Aligned_cols=94 Identities=10% Similarity=0.031 Sum_probs=66.7
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (666)
.|+.++++. +. ..+|...+...+..+... .++.++|++..++|-.-. .....+.++..|+..+..+
T Consensus 33 ~p~~~a~~~---~~------~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~-~~~~~la~~~~G~v~v~l~~ 102 (567)
T PLN02479 33 HPTRKSVVH---GS------VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPA-MYEAHFGVPMAGAVVNCVNI 102 (567)
T ss_pred CCCceEEEE---CC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH-HHHHHHHHHhCCcEEEEecc
Confidence 456666653 21 247888877666655444 478899999998885432 2334667888898887766
Q ss_pred -CCHHHHHHHHHhhcCeEEeechHHHHHH
Q 005991 330 -GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (666)
Q Consensus 330 -~~~~~~~~~i~~~~~t~~~~~P~~~~~l 357 (666)
.....+...++..++..++..+..+...
T Consensus 103 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 131 (567)
T PLN02479 103 RLNAPTIAFLLEHSKSEVVMVDQEFFTLA 131 (567)
T ss_pred ccCHHHHHHHHhhcCceEEEEchhhhhHH
Confidence 6788899999999999999887765443
No 240
>PRK11761 cysM cysteine synthase B; Provisional
Probab=25.66 E-value=4.7e+02 Score=26.42 Aligned_cols=70 Identities=7% Similarity=-0.057 Sum_probs=48.5
Q ss_pred HHHHHHHHHhCC-CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEcc
Q 005991 123 RKEIGSGLLFHG-LQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIP 193 (666)
Q Consensus 123 ~~~lA~~L~~~g-v~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 193 (666)
+..+...+.+.| +.+|+.|.. ...+---..+.++|.+.|.-+..+-|...+......++..++++++++.
T Consensus 47 a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 47 ALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred HHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 333444444556 467776644 4555566667778888998777666655556777888899999999985
No 241
>PLN02614 long-chain acyl-CoA synthetase
Probab=25.59 E-value=7.6e+02 Score=28.30 Aligned_cols=83 Identities=7% Similarity=-0.170 Sum_probs=60.9
Q ss_pred EEecHHHHHHHHhhccc---ccccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEe
Q 005991 274 AVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFP 348 (666)
Q Consensus 274 V~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~ 348 (666)
..+|.+.+...+..+.. ..++.++|++..++|-..-+ ....++++..|+..+-.. ..+.++...++..++.+++
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi 156 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEW-IISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVF 156 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEE
Confidence 35788887766655443 36789999999988865421 233567788898887665 6888999999999999999
Q ss_pred echHHHHHH
Q 005991 349 SVPRLYNRI 357 (666)
Q Consensus 349 ~~P~~~~~l 357 (666)
.....+..+
T Consensus 157 ~~~~~~~~~ 165 (666)
T PLN02614 157 VEEKKISEL 165 (666)
T ss_pred ECHHHHHHH
Confidence 877655544
No 242
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=25.46 E-value=4.9e+02 Score=26.22 Aligned_cols=66 Identities=11% Similarity=0.025 Sum_probs=45.3
Q ss_pred HHHhCC-CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEcccc
Q 005991 129 GLLFHG-LQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT 195 (666)
Q Consensus 129 ~L~~~g-v~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~ 195 (666)
...+.| +.+|++| +....+-.-..+.+++.++|..+..+-|...+......++..++++++++...
T Consensus 47 ~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 47 DAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGAE 113 (298)
T ss_pred HHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCCC
Confidence 344456 4778776 44445555556666777899877666665544556778899999999998653
No 243
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=25.45 E-value=91 Score=18.72 Aligned_cols=18 Identities=11% Similarity=0.158 Sum_probs=15.1
Q ss_pred EecCCcEEEEccCCCeEE
Q 005991 532 WLPGGRLKIIDRKKNIFK 549 (666)
Q Consensus 532 ~~~dG~l~i~GR~~d~ik 549 (666)
++++|.+++.++..+.|+
T Consensus 9 v~~~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQ 26 (28)
T ss_dssp EETTSEEEEEECCCTEEE
T ss_pred EeCCCCEEEEECCCCEEE
Confidence 458999999998888775
No 244
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.39 E-value=3.3e+02 Score=30.30 Aligned_cols=82 Identities=12% Similarity=-0.034 Sum_probs=61.6
Q ss_pred EecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEee
Q 005991 275 VLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPS 349 (666)
Q Consensus 275 ~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~ 349 (666)
.+|.+.+...+...... .++..+|++..++|-...+ ....+.++..|+..+..+ .....+...+...++..++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQH-IVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 47888887766655443 5688999999988876442 334667788888887765 68899999999999999998
Q ss_pred chHHHHHH
Q 005991 350 VPRLYNRI 357 (666)
Q Consensus 350 ~P~~~~~l 357 (666)
....+..+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77765544
No 245
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=25.17 E-value=7.9e+02 Score=26.02 Aligned_cols=153 Identities=16% Similarity=0.161 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecC-------CCCCHHHHHHHHHhcCceEEEEcccc
Q 005991 123 RKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLY-------DTLGPDAVKYVVNHAEIEAIFCIPQT 195 (666)
Q Consensus 123 ~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~-------~~~~~~~l~~~l~~~~~~~vi~~~~~ 195 (666)
...+...+... +.+||.|.+ ..|.|..-.-.+..+|+.+++++ .....+++...+.. +.++++....+
T Consensus 99 ~~al~~~~~a~-~~pGDeVli---p~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln~P~ 173 (393)
T COG0436 99 KEALFLAFLAL-LNPGDEVLI---PDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIILNSPN 173 (393)
T ss_pred HHHHHHHHHHh-cCCCCEEEE---eCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEEeCCC
Q ss_pred --------HHHHHHhhhcCCCceEEEEeCCCCCCCCCCCCCCCcEEEehHHHHhcCCCCCCCCCCCCCCCcEEEEe----
Q 005991 196 --------LNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICY---- 263 (666)
Q Consensus 196 --------~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~---- 263 (666)
.+.+.++.+-+.....+++.|+ -|+++.-.+.............+.+..++
T Consensus 174 NPTGav~~~~~l~~i~~~a~~~~i~ii~DE-----------------iY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK 236 (393)
T COG0436 174 NPTGAVYSKEELKAIVELAREHDIIIISDE-----------------IYEELVYDGAEHPSILELAGARDRTITINSFSK 236 (393)
T ss_pred CCcCcCCCHHHHHHHHHHHHHcCeEEEEeh-----------------hhhhcccCCCCcCCHhhcCCCcceEEEEecccc
Q ss_pred ccCCCCCccEEEecH-HHHHHHHhhcccccccCCC
Q 005991 264 TSGTTGTPKGAVLTH-GNLISNVAGFSLMVQFYPS 297 (666)
Q Consensus 264 TSGTTG~PKgV~~th-~~l~~~~~~~~~~~~~~~~ 297 (666)
+-|=||---|-++.. +.++..+............
T Consensus 237 ~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~~~~~~ 271 (393)
T COG0436 237 TYGMTGWRIGWVVGPPEELIAALRKLKSYLTSCAP 271 (393)
T ss_pred cccccccceeEeecChHHHHHHHHHHHHhcccCCC
No 246
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=24.38 E-value=4.6e+02 Score=29.04 Aligned_cols=94 Identities=14% Similarity=0.090 Sum_probs=66.4
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhccc----ccccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL----MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~ 329 (666)
.++.+|++.. | -.+|+..+...+..+.. ..++.++|++..++|-...+ ....+.++..|+..+..+
T Consensus 38 ~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~ 107 (560)
T PRK08751 38 FADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQY-PIATFGVLRAGLTVVNVN 107 (560)
T ss_pred CCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHHhCeEEeccC
Confidence 3566776532 2 24788888776665543 35788999999888765332 334667788899888665
Q ss_pred --CCHHHHHHHHHhhcCeEEeechHHHHHH
Q 005991 330 --GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (666)
Q Consensus 330 --~~~~~~~~~i~~~~~t~~~~~P~~~~~l 357 (666)
....++...++..+++.++........+
T Consensus 108 p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 137 (560)
T PRK08751 108 PLYTPRELKHQLIDSGASVLVVIDNFGTTV 137 (560)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEcchhHHHH
Confidence 5778889999999999998877665443
No 247
>PRK05850 acyl-CoA synthetase; Validated
Probab=23.46 E-value=6.4e+02 Score=28.03 Aligned_cols=101 Identities=12% Similarity=0.085 Sum_probs=67.2
Q ss_pred CCCCcEEEEec-cC-CCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEe
Q 005991 254 KPEDIATICYT-SG-TTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFY 328 (666)
Q Consensus 254 ~~~~~a~i~~T-SG-TTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~ 328 (666)
.|+.++++... ++ ..|. ...+|...+...+..+... .+ .++|++..+++-.. -.....+.++..|+.++..
T Consensus 14 ~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~vpl 89 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGL-EYIVAFLGALQAGLIAVPL 89 (578)
T ss_pred CCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcc-cHHHHHHHHHHcCceEEec
Confidence 45667665421 11 1222 3568998887666554443 34 47899988888553 2233466788899988876
Q ss_pred cC-----CHHHHHHHHHhhcCeEEeechHHHHHHH
Q 005991 329 QG-----DNLKLMDDLAVLKPTIFPSVPRLYNRIY 358 (666)
Q Consensus 329 ~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 358 (666)
+. ....+...++..++.+++..+.....+.
T Consensus 90 ~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~ 124 (578)
T PRK05850 90 SVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVT 124 (578)
T ss_pred CCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHH
Confidence 52 4677888999999999999887766554
No 248
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=23.38 E-value=3.5e+02 Score=34.22 Aligned_cols=97 Identities=12% Similarity=0.037 Sum_probs=66.2
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (666)
.|+.+|++...+...+......+|.+.+...+..+... .++.+++++..++|-...+ ...+++++..|+..+..+
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~-i~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL-VVAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH-HHHHHHHHhhCcEEeccCC
Confidence 56778876533211111123468999887777665544 5788999999988866432 344678899999888776
Q ss_pred -CCHHHHHHHHHhhcCeEEeech
Q 005991 330 -GDNLKLMDDLAVLKPTIFPSVP 351 (666)
Q Consensus 330 -~~~~~~~~~i~~~~~t~~~~~P 351 (666)
..+.++...++..++..++...
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~~ 350 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVIE 350 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEec
Confidence 4677788888888888777643
No 249
>PRK13390 acyl-CoA synthetase; Provisional
Probab=23.30 E-value=5.8e+02 Score=27.67 Aligned_cols=92 Identities=11% Similarity=0.017 Sum_probs=64.6
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (666)
.|+.++++.. .+| -.+|...+...+..+... .++.++|++..+++-...+ +...+.++..|+..+..+
T Consensus 10 ~p~~~a~~~~---~~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~-~~~~la~~~~Ga~~~~l~~ 81 (501)
T PRK13390 10 APDRPAVIVA---ETG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEA-LVVLWAALRSGLYITAINH 81 (501)
T ss_pred CCCCcEEEec---CCC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHhCCEEecccc
Confidence 4666766542 222 358999887776665543 5688999999888766432 334667788898877665
Q ss_pred -CCHHHHHHHHHhhcCeEEeechHH
Q 005991 330 -GDNLKLMDDLAVLKPTIFPSVPRL 353 (666)
Q Consensus 330 -~~~~~~~~~i~~~~~t~~~~~P~~ 353 (666)
..+.++...++..++..+......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~~~ 106 (501)
T PRK13390 82 HLTAPEADYIVGDSGARVLVASAAL 106 (501)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcchh
Confidence 578888888999999888776543
No 250
>PRK06108 aspartate aminotransferase; Provisional
Probab=23.25 E-value=7.9e+02 Score=25.51 Aligned_cols=53 Identities=19% Similarity=0.095 Sum_probs=28.5
Q ss_pred CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEE--ecCCC-----CCHHHHHHHHHhcCceEEEE
Q 005991 135 LQKGVRIGLYLINRPEWLIVDHACSAYSYISV--PLYDT-----LGPDAVKYVVNHAEIEAIFC 191 (666)
Q Consensus 135 v~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~v--pl~~~-----~~~~~l~~~l~~~~~~~vi~ 191 (666)
.++||.|.+..|.-..+ ..++...|+.++ |+++. ...+.+...+.. +.++++.
T Consensus 105 ~~~gd~vl~~~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~i~l 164 (382)
T PRK06108 105 VGPGDEVVAVTPLWPNL---VAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITP-RTRALFI 164 (382)
T ss_pred cCCCCEEEEeCCCccch---HHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCc-cceEEEE
Confidence 35788887766543322 234455676554 44321 456677666643 4555444
No 251
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=23.19 E-value=6.8e+02 Score=28.38 Aligned_cols=107 Identities=15% Similarity=0.078 Sum_probs=75.3
Q ss_pred HhCCCCceEEEEEeccCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH-HHHHhcCCeEE
Q 005991 90 ENYPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD-HACSAYSYISV 166 (666)
Q Consensus 90 ~~~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~-lA~~~~G~~~v 166 (666)
...||..|.+.. ..|++|. ..-+||+-+...+..+...+. -++++|++..++|-+-=+=-++ .++...|.+.+
T Consensus 187 ~~~~dDlatiiY--TSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~ 262 (613)
T COG1022 187 PPKPDDLATIIY--TSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTV 262 (613)
T ss_pred CCCccceEEEEE--cCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEE
Confidence 456777776554 2455443 568999999999988887765 4789999999999764333332 55555555544
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHh
Q 005991 167 PLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSF 202 (666)
Q Consensus 167 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 202 (666)
.. ..+...+..-+...+|.+++.-+...+.+.+.
T Consensus 263 ~~--~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~ 296 (613)
T COG1022 263 LF--KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKG 296 (613)
T ss_pred Ee--cCCHHHHHHHHHHhCCeEEeechHHHHHHHHH
Confidence 33 34577899999999999999988777665543
No 252
>PRK04837 ATP-dependent RNA helicase RhlB; Provisional
Probab=23.07 E-value=9.3e+02 Score=25.64 Aligned_cols=93 Identities=8% Similarity=-0.028 Sum_probs=52.3
Q ss_pred eHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHH---hcCceEEEE
Q 005991 115 TYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVN---HAEIEAIFC 191 (666)
Q Consensus 115 Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~---~~~~~~vi~ 191 (666)
.|..-......+...|... ...++.|++++....-...-.+...|..+..++..++.++-..+++ .-+.+++|+
T Consensus 235 ~~~~~~~k~~~l~~ll~~~---~~~~~lVF~~t~~~~~~l~~~L~~~g~~v~~lhg~~~~~~R~~~l~~F~~g~~~vLVa 311 (423)
T PRK04837 235 FYPSNEEKMRLLQTLIEEE---WPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILEEFTRGDLDILVA 311 (423)
T ss_pred EeCCHHHHHHHHHHHHHhc---CCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCChhHHHHHHHHHHcCCCcEEEE
Confidence 3433344444555444432 3457888887654333333334456888888888887765555554 446778887
Q ss_pred ccccHHHHHHhhhcCCCceEEEEe
Q 005991 192 IPQTLNTLLSFISEIPSVHLIVVV 215 (666)
Q Consensus 192 ~~~~~~~~~~~~~~~~~l~~ii~~ 215 (666)
.+-... --.+|.+..+|.+
T Consensus 312 Tdv~~r-----GiDip~v~~VI~~ 330 (423)
T PRK04837 312 TDVAAR-----GLHIPAVTHVFNY 330 (423)
T ss_pred echhhc-----CCCccccCEEEEe
Confidence 753211 1145566666554
No 253
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=23.05 E-value=8.4e+02 Score=25.14 Aligned_cols=54 Identities=17% Similarity=0.082 Sum_probs=33.0
Q ss_pred CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCC---CCCHHHHHHHHHhcCceEEEEc
Q 005991 135 LQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYD---TLGPDAVKYVVNHAEIEAIFCI 192 (666)
Q Consensus 135 v~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~---~~~~~~l~~~l~~~~~~~vi~~ 192 (666)
+++||.|.+-.|. |.....++...|+.+++++. ....+.+...++ -++++|++.
T Consensus 105 ~~~gd~vl~~~p~---y~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~ 161 (367)
T PRK02731 105 LGPGDEVIYSEHG---FAVYPIAAQAVGAKPVEVPAKDYGHDLDAMLAAVT-PRTRLVFIA 161 (367)
T ss_pred cCCCCEEEEecCC---HHHHHHHHHHcCCeEEEecccCCCCCHHHHHHHhC-CCCcEEEEe
Confidence 4678888887654 33444455678887766543 345566766665 356666543
No 254
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=22.86 E-value=2.6e+02 Score=20.81 Aligned_cols=35 Identities=26% Similarity=0.426 Sum_probs=26.2
Q ss_pred ccEEEEeCCCcCccccCChhhhhhccCCCCeeecccEEEEecCCcEEEEc
Q 005991 493 RGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIID 542 (666)
Q Consensus 493 ~GEl~v~g~~v~~GY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~G 542 (666)
.|.+|+.-.+ + ..|-|++.||--.+...+.+.+-+
T Consensus 24 ~G~vWlT~~g-------~--------~~D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 24 SGRVWLTREG-------D--------PDDYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred cccEEEECCC-------C--------CCCEEECCCCEEEeCCCCEEEEEe
Confidence 4888886543 1 168899999999998888777654
No 255
>PRK09082 methionine aminotransferase; Validated
Probab=22.48 E-value=8.7e+02 Score=25.39 Aligned_cols=53 Identities=8% Similarity=-0.052 Sum_probs=30.0
Q ss_pred CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCC-----CCHHHHHHHHHhcCceEEEE
Q 005991 135 LQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDT-----LGPDAVKYVVNHAEIEAIFC 191 (666)
Q Consensus 135 v~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~ 191 (666)
+.+||.|.+..|.-. ....++..+|+.+++++.. ...+.+...++. +.+++++
T Consensus 112 ~~~gd~Vli~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l 169 (386)
T PRK09082 112 VRPGDEVIVFDPSYD---SYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISP-RTRLIIL 169 (386)
T ss_pred cCCCCEEEEeCCCch---hhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCc-cceEEEE
Confidence 367888877655333 3344445567766655432 344566666643 5666665
No 256
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=22.12 E-value=6.1e+02 Score=25.55 Aligned_cols=66 Identities=12% Similarity=0.013 Sum_probs=46.0
Q ss_pred HHHHhCC-CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccc
Q 005991 128 SGLLFHG-LQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQ 194 (666)
Q Consensus 128 ~~L~~~g-v~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 194 (666)
..+.+.| +.+|+.|. ....+-.-..+-++|.++|.-++.+-|...+..-...++..++++++++..
T Consensus 47 ~~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 47 EDAEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 3344455 47787663 455555566666778889987776666555556667899999999999764
No 257
>cd06410 PB1_UP2 Uncharacterized protein 2. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions.
Probab=22.11 E-value=4e+02 Score=21.88 Aligned_cols=73 Identities=12% Similarity=0.122 Sum_probs=48.4
Q ss_pred cEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHhcCcCcceE--EEEEeCCCCeEEEEE-EcChhHHHHHHHHc
Q 005991 528 DIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQC--FIYGDSFNSCLVAIV-AVDPDVLKDWAASQ 603 (666)
Q Consensus 528 Dlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~~~p~V~~~--~V~g~~~~~~~va~v-v~~~~~l~~~~~~~ 603 (666)
.+.-...||.+.++|-...++.+.++ ++..|+-..+.++-.+... .=+.-+.++. -++| +.+++++.....+.
T Consensus 7 ~i~pr~~dg~l~Y~GG~tr~i~V~r~--~s~~el~~kl~~~~~~~~~~~lky~Lp~edl-d~Lisv~~DeDl~~M~~e~ 82 (97)
T cd06410 7 RILPRPPDGQLRYVGGETRIVSVDRS--ISFKELVSKLSELFGAGVVVTLKYQLPDEDL-DALISVSNDEDLKNMMEEY 82 (97)
T ss_pred EEeCcCCCCCEEEcCCceEEEEEcCC--CCHHHHHHHHHHHhCCCCceEEEEEcCCCCc-ceeEEecCcHHHHHHHHhh
Confidence 33323578999999988889988555 8889999998777665552 2234444433 3444 44667777777665
No 258
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=22.03 E-value=4.3e+02 Score=29.40 Aligned_cols=81 Identities=11% Similarity=0.041 Sum_probs=58.7
Q ss_pred EEecHHHHHHHHhhcccc----cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEE
Q 005991 274 AVLTHGNLISNVAGFSLM----VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIF 347 (666)
Q Consensus 274 V~~th~~l~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~ 347 (666)
..+|...+...+..+... .++.++|++..++|-... .....+.++..|+..+... .....+...++..++..+
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e-~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~ 126 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQ-YPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEE
Confidence 467888887666555443 367899999988776542 2334567788888877665 578889999999999998
Q ss_pred eechHHHH
Q 005991 348 PSVPRLYN 355 (666)
Q Consensus 348 ~~~P~~~~ 355 (666)
+..+.+..
T Consensus 127 i~~~~~~~ 134 (562)
T PRK12492 127 VYLNMFGK 134 (562)
T ss_pred Eeccccch
Confidence 87765443
No 259
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=21.98 E-value=8.7e+02 Score=27.29 Aligned_cols=101 Identities=14% Similarity=0.057 Sum_probs=66.7
Q ss_pred CCCCcEEEEec--cCCCCCccEEEecHHHHHHHHhhccccc--ccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEe-
Q 005991 254 KPEDIATICYT--SGTTGTPKGAVLTHGNLISNVAGFSLMV--QFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFY- 328 (666)
Q Consensus 254 ~~~~~a~i~~T--SGTTG~PKgV~~th~~l~~~~~~~~~~~--~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~- 328 (666)
.++.++++.-. .+++|. ...+|...+...+..+...+ .+.++|++..++|-... .+...+.++..|+..+.+
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e-~~~~~lA~~~aG~v~vpl~ 123 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGID-YVAGFFAAIKAGTIAVPLF 123 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChh-HHHHHHHHHHcCceeEecC
Confidence 35667765421 112332 34688888876665544432 26889999999887643 233366788889887754
Q ss_pred cC----CHHHHHHHHHhhcCeEEeechHHHHHH
Q 005991 329 QG----DNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (666)
Q Consensus 329 ~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l 357 (666)
+. ....+...++..++.+++..+..+..+
T Consensus 124 ~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 156 (612)
T PRK12476 124 APELPGHAERLDTALRDAEPTVVLTTTAAAEAV 156 (612)
T ss_pred CCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHH
Confidence 31 267888999999999999887766544
No 260
>PRK12414 putative aminotransferase; Provisional
Probab=21.95 E-value=9.2e+02 Score=25.18 Aligned_cols=53 Identities=9% Similarity=0.014 Sum_probs=28.2
Q ss_pred CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEec--CC---CCCHHHHHHHHHhcCceEEEE
Q 005991 135 LQKGVRIGLYLINRPEWLIVDHACSAYSYISVPL--YD---TLGPDAVKYVVNHAEIEAIFC 191 (666)
Q Consensus 135 v~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl--~~---~~~~~~l~~~l~~~~~~~vi~ 191 (666)
+.+||.|.+..|.- ....-.+..+|+.++++ ++ ....+.+...++. +.++++.
T Consensus 111 ~~~gd~Vlv~~p~y---~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~i 168 (384)
T PRK12414 111 VHPGDEVIYFEPSF---DSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITP-RTRMIIV 168 (384)
T ss_pred cCCCCEEEEeCCCc---cchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCc-ccEEEEE
Confidence 46788877765542 22233344456655444 32 1355667666643 5566554
No 261
>PRK08162 acyl-CoA synthetase; Validated
Probab=21.79 E-value=4.1e+02 Score=29.31 Aligned_cols=83 Identities=8% Similarity=-0.063 Sum_probs=62.8
Q ss_pred EecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEee
Q 005991 275 VLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPS 349 (666)
Q Consensus 275 ~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~ 349 (666)
.+|.+.+...+..+... .++.++|++...+|-...+ ....+.++..|+..+..+ .....+...++..+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAM-VEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 58998887776655544 4788999999988876432 233667788888877766 57888999999999999999
Q ss_pred chHHHHHHH
Q 005991 350 VPRLYNRIY 358 (666)
Q Consensus 350 ~P~~~~~l~ 358 (666)
.+.....+.
T Consensus 122 ~~~~~~~~~ 130 (545)
T PRK08162 122 DTEFAEVAR 130 (545)
T ss_pred ccchhhHHH
Confidence 887765543
No 262
>PRK12582 acyl-CoA synthetase; Provisional
Probab=21.53 E-value=4.7e+02 Score=29.65 Aligned_cols=94 Identities=15% Similarity=0.109 Sum_probs=62.3
Q ss_pred CCCCcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec-
Q 005991 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (666)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (666)
.|+.++++....+ +| ..-.+|.+.+...+..+... .++.++|++..+++-.. -.....+.++..|+..+..+
T Consensus 62 ~pd~~a~~~~~~~-~~--~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl~p 137 (624)
T PRK12582 62 APDRPWLAQREPG-HG--QWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSI-EHALMTLAAMQAGVPAAPVSP 137 (624)
T ss_pred CCCchheecccCC-CC--ceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCH-HHHHHHHHHHHcCCeEeeccC
Confidence 3556665442211 22 13468998887776655543 57889999999988442 22334667788898887665
Q ss_pred -CC-----HHHHHHHHHhhcCeEEeech
Q 005991 330 -GD-----NLKLMDDLAVLKPTIFPSVP 351 (666)
Q Consensus 330 -~~-----~~~~~~~i~~~~~t~~~~~P 351 (666)
.. ..++...++..++..++...
T Consensus 138 ~~~~~~~~~~~l~~~l~~~~~~~vi~~~ 165 (624)
T PRK12582 138 AYSLMSHDHAKLKHLFDLVKPRVVFAQS 165 (624)
T ss_pred ccccccCCHHHHHHHHHhcCCcEEEecC
Confidence 22 37888899999998887654
No 263
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=21.49 E-value=7.5e+02 Score=26.37 Aligned_cols=57 Identities=19% Similarity=0.001 Sum_probs=47.9
Q ss_pred CCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEec--CCCCCHHHHHHHHHhcCceEEEEc
Q 005991 136 QKGVRIGLYLINRPEWLIVDHACSAYSYISVPL--YDTLGPDAVKYVVNHAEIEAIFCI 192 (666)
Q Consensus 136 ~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl--~~~~~~~~l~~~l~~~~~~~vi~~ 192 (666)
=+|-+|+.++.=.++..+.+..+..+|+-+... ||....+++...|...+..+.-..
T Consensus 30 l~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~ 88 (406)
T TIGR00936 30 LKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWR 88 (406)
T ss_pred CCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEec
Confidence 358899999999999999999999999965544 887888999999999888876544
No 264
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=21.49 E-value=5.6e+02 Score=29.30 Aligned_cols=83 Identities=10% Similarity=-0.120 Sum_probs=61.3
Q ss_pred EEecHHHHHHHHhhcccc---cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEe
Q 005991 274 AVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFP 348 (666)
Q Consensus 274 V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~ 348 (666)
..+|.+.+...+..+... .++.++|++..+++-...+ ....+.++..|+..+-.. .....+...++..++++++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 458888887776655443 5789999999988865332 333567888898877655 6788899999999999998
Q ss_pred echHHHHHH
Q 005991 349 SVPRLYNRI 357 (666)
Q Consensus 349 ~~P~~~~~l 357 (666)
.....+..+
T Consensus 155 ~~~~~~~~~ 163 (660)
T PLN02861 155 VQESKISSI 163 (660)
T ss_pred ECHHHHHHH
Confidence 876655544
No 265
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=21.35 E-value=1.7e+02 Score=28.53 Aligned_cols=60 Identities=12% Similarity=0.111 Sum_probs=33.5
Q ss_pred ccEEEEecCCcEEEEccCCCeEEcCCeeeeccH--HHHHHHhcCcCcceEEEEEeCCCCeEEEEEEcC
Q 005991 527 GDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPE--KIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVD 592 (666)
Q Consensus 527 GDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~--eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~ 592 (666)
|++.+.++||.+.|.|. ++.+.++..++.. .++..+...+ .+.++++.++... +.++..|
T Consensus 55 ~~i~Y~~~dg~y~i~G~---l~d~~~~~~~~~t~~~~~~~~~~l~--~~~i~~g~~~~k~-~I~vFtD 116 (232)
T PRK10877 55 SGVLYITDDGKHIIQGP---MYDVSGTAPVNVTNQLLLKKLNALE--KEMIVYKAPQEKH-VITVFTD 116 (232)
T ss_pred CeEEEEcCCCCEEEeee---eEecCCCCCCChHHHHHHHHHHhhh--hhcEEecCCCCCE-EEEEEEC
Confidence 34778889999888885 4554222323332 2334444555 4578888775443 3333344
No 266
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=21.17 E-value=6.5e+02 Score=25.84 Aligned_cols=74 Identities=9% Similarity=0.079 Sum_probs=53.7
Q ss_pred HHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEEccccHHHHHHhhhc
Q 005991 129 GLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISE 205 (666)
Q Consensus 129 ~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~ 205 (666)
.|.+.|+.||.+|+|..--+.-.+...+|... |.-++.++... ..-+..+++.++...+...+..+....+...
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~ 246 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDPDIMKAIMKT 246 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCHHHHHHHHHh
Confidence 45677999999999999999988888888764 66666677543 2334677888999888776555554444433
No 267
>PRK11179 DNA-binding transcriptional regulator AsnC; Provisional
Probab=21.16 E-value=2.4e+02 Score=25.27 Aligned_cols=44 Identities=9% Similarity=0.092 Sum_probs=35.0
Q ss_pred HHHHHHHhcCcCcceEEEEEeCCCCeEEEEEEcChhHHHHHHHHc
Q 005991 559 EKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQ 603 (666)
Q Consensus 559 ~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~~~~ 603 (666)
.++.+.|.++|+|..|+.+... .+..+-+..++.+++.+++.++
T Consensus 84 ~~~~~~l~~~p~V~~~~~~tG~-~dl~~~v~~~d~~~l~~~~~~~ 127 (153)
T PRK11179 84 PSALAKLESLDEVVEAYYTTGH-YSIFIKVMCRSIDALQHVLINK 127 (153)
T ss_pred HHHHHHHhCCCCEEEEEEcccC-CCEEEEEEECCHHHHHHHHHHH
Confidence 5677889999999999887543 4667777788999999888765
No 268
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=21.16 E-value=4.3e+02 Score=28.48 Aligned_cols=55 Identities=7% Similarity=-0.051 Sum_probs=26.9
Q ss_pred CCCCCEEEEEcCCCHhHHHHH--HHHHhcCCeEEecCCCCCHHHHHHHHHhcCceEEEE
Q 005991 135 LQKGVRIGLYLINRPEWLIVD--HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFC 191 (666)
Q Consensus 135 v~~gd~V~i~~~n~~e~~~~~--lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 191 (666)
+++||.|.+ .++.......+ ..+.+.|+.+..++....+++++..++. +.++|++
T Consensus 97 l~~GD~VI~-~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~ 153 (432)
T PRK06702 97 CSSGDHLLC-SSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYA 153 (432)
T ss_pred cCCCCEEEE-CCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEE
Confidence 456666544 22333222222 2245566666666655555666666543 4445554
No 269
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=21.14 E-value=1.5e+02 Score=29.75 Aligned_cols=57 Identities=14% Similarity=0.009 Sum_probs=44.9
Q ss_pred eEEeHHHHHH-----HHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEec
Q 005991 112 KWMTYGEVSA-----ARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPL 168 (666)
Q Consensus 112 ~~~Ty~el~~-----~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl 168 (666)
..+.|.++.+ ....+...|.+.|+.+++.|.++|.++.....+++++..+|..-+-+
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~~v~~ 261 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVPNVKL 261 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCcee
Confidence 3577787763 24667777888899999999999999999999999998899764433
No 270
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=20.91 E-value=4.5e+02 Score=22.08 Aligned_cols=69 Identities=19% Similarity=0.374 Sum_probs=42.0
Q ss_pred cccEEEEecCCcEEEEccCCCeEEcCCe--eeeccHHHHHHHhcCcCcceEEEEEeCCCCeEEEEEEcChhHHHHHHHHc
Q 005991 526 TGDIGLWLPGGRLKIIDRKKNIFKLAQG--EYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQ 603 (666)
Q Consensus 526 TGDlg~~~~dG~l~i~GR~~d~ikl~~G--~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~~~~ 603 (666)
+-|+.. .+||.+. -|.+.+=|-.-| ++++++|+|.+|..-| +.+|+|... ..++.+++ +.+++++++
T Consensus 20 ~~DIvi-~~dG~v~--rr~K~lskrK~GTSHkl~~eEle~~lee~~---E~ivvGTG~----~G~l~l~~-ea~e~~r~k 88 (121)
T COG1504 20 EHDIVI-RPDGKVE--RREKELSKRKYGTSHKLALEELEELLEEGP---EVIVVGTGQ----SGMLELSE-EAREFFRKK 88 (121)
T ss_pred cccEEE-ecCCcee--hhhhhhhhhhcCcccccCHHHHHHHHhcCC---cEEEEecCc----eeEEEeCH-HHHHHHHhc
Confidence 345553 3677543 455555543457 9999999999998666 457777652 23444443 344555555
Q ss_pred CC
Q 005991 604 GI 605 (666)
Q Consensus 604 ~l 605 (666)
+.
T Consensus 89 ~~ 90 (121)
T COG1504 89 GC 90 (121)
T ss_pred CC
Confidence 43
No 271
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=20.90 E-value=2.2e+02 Score=23.77 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=30.9
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCe
Q 005991 125 EIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYI 164 (666)
Q Consensus 125 ~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~ 164 (666)
.+...+...|+.+++.|.++|.++.....+...+..+|..
T Consensus 65 ~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 65 ELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4555567788889999999999887777777777777864
No 272
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=20.88 E-value=5.5e+02 Score=28.51 Aligned_cols=96 Identities=17% Similarity=0.118 Sum_probs=65.0
Q ss_pred CcEEEEeccCCCCCccEEEecHHHHHHHHhhcccc----cccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEe--cC
Q 005991 257 DIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM----VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFY--QG 330 (666)
Q Consensus 257 ~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~--~~ 330 (666)
+-..|+|-+-.++. -.+|.+.|...+..+... .+. ++|++..++|..--. ...++.+...|+..... .+
T Consensus 25 ~~~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~-~~a~LA~~riGAI~~~vf~~f 99 (528)
T COG0365 25 DDTAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA-VIALLATARIGAIPAVVSPGL 99 (528)
T ss_pred CceEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH-HHHHHHHHHcCCEEeecccCC
Confidence 33445665544444 678888877666554443 446 999999999987432 22355667777654433 27
Q ss_pred CHHHHHHHHHhhcCeEEeechHHHHHH
Q 005991 331 DNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (666)
Q Consensus 331 ~~~~~~~~i~~~~~t~~~~~P~~~~~l 357 (666)
.+..+...+...++.++++....+.+.
T Consensus 100 ~~~al~~Ri~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 100 SAEAVADRIADLGPKVLIADDGTFRNG 126 (528)
T ss_pred CHHHHHHHHHccCCCEEEEeccccccc
Confidence 899999999999999998777666543
No 273
>PHA02885 putative interleukin binding protein; Provisional
Probab=20.73 E-value=71 Score=25.99 Aligned_cols=40 Identities=25% Similarity=0.395 Sum_probs=30.9
Q ss_pred CCeeecccEEEEecCCcEEEEccCCCeEEcCCeeeeccHHHHHHHh
Q 005991 521 DGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYA 566 (666)
Q Consensus 521 ~gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~eIE~~l~ 566 (666)
++.+.||-+- .+||++|.+|-... +-|++|+++.+|.+..
T Consensus 48 ~rllcs~~ln--sedgyiywi~pnnt----spgeyif~enl~g~~e 87 (135)
T PHA02885 48 DRLLCSGCLN--SEDGYIYWIGPNNT----SPGEYIFIENLEGANE 87 (135)
T ss_pred hhheeeeeec--CCCceEEEEeCCCC----CCcceeeeeccccccc
Confidence 5677887665 47899999998763 6799999988876553
No 274
>COG1111 MPH1 ERCC4-like helicases [DNA replication, recombination, and repair]
Probab=20.48 E-value=1.1e+03 Score=25.71 Aligned_cols=108 Identities=16% Similarity=0.151 Sum_probs=71.6
Q ss_pred CCCCCCCCCHHHHHHHHHHhCCCCceEEEEEeccCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhH
Q 005991 72 FPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEW 151 (666)
Q Consensus 72 ~~~~~~~~tl~~~~~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~ 151 (666)
...+|.+.-+-+++.+..+++++..++++. |+.+-+..+...|.+.|.... +-.++..+.+.
T Consensus 344 ~v~HPKl~~l~eilke~~~k~~~~RvIVFT----------------~yRdTae~i~~~L~~~~~~~~--~rFiGQa~r~~ 405 (542)
T COG1111 344 GVEHPKLEKLREILKEQLEKNGDSRVIVFT----------------EYRDTAEEIVNFLKKIGIKAR--VRFIGQASREG 405 (542)
T ss_pred cCCCccHHHHHHHHHHHHhcCCCceEEEEe----------------hhHhHHHHHHHHHHhcCCcce--eEEeecccccc
Confidence 445788889999999999999987777653 455678888899998876554 34444332221
Q ss_pred HHHHHHHHhcCCeEEecCCCCCHHHHHHHHHhc---CceEEEEccccHHHHHHhhhcCCCceEEEEeCCCC
Q 005991 152 LIVDHACSAYSYISVPLYDTLGPDAVKYVVNHA---EIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKD 219 (666)
Q Consensus 152 ~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~---~~~~vi~~~~~~~~~~~~~~~~~~l~~ii~~~~~~ 219 (666)
+..++..+-..+|++. ..+++++.+--.+ --.+|....+|+.+...
T Consensus 406 -----------------~~GMsQkeQ~eiI~~Fr~Ge~nVLVaTSVgEE-----GLDIp~vDlVifYEpvp 454 (542)
T COG1111 406 -----------------DKGMSQKEQKEIIDQFRKGEYNVLVATSVGEE-----GLDIPEVDLVIFYEPVP 454 (542)
T ss_pred -----------------ccccCHHHHHHHHHHHhcCCceEEEEcccccc-----cCCCCcccEEEEecCCc
Confidence 2456666666666654 4677777642221 12578888899887754
No 275
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=20.33 E-value=2e+02 Score=22.54 Aligned_cols=42 Identities=17% Similarity=0.114 Sum_probs=35.2
Q ss_pred HHHHHh-CCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEec
Q 005991 127 GSGLLF-HGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPL 168 (666)
Q Consensus 127 A~~L~~-~gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~~~vpl 168 (666)
+++|.+ .|++.|+.++.+...-.|.+..+=|.+++.-+-+..
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~~~ 45 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVELAT 45 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceeeEe
Confidence 456766 499999999999999999999999999998765543
No 276
>PRK11169 leucine-responsive transcriptional regulator; Provisional
Probab=20.31 E-value=2.3e+02 Score=25.73 Aligned_cols=45 Identities=11% Similarity=0.157 Sum_probs=35.2
Q ss_pred cHHHHHHHhcCcCcceEEEEEeCCCCeEEEEEEcChhHHHHHHHHc
Q 005991 558 PEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQ 603 (666)
Q Consensus 558 p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~l~~~~~~~ 603 (666)
..++.+.+.++|.|.+|+.+.-. .+.++-+.+.+.+++.+++.++
T Consensus 90 ~~~~~~~l~~~p~V~~~~~vtG~-~d~~l~v~~~~~~~l~~~l~~~ 134 (164)
T PRK11169 90 FEQFNAAVQKLEEIQECHLVSGD-FDYLLKTRVPDMSAYRKLLGET 134 (164)
T ss_pred HHHHHHHHhcCcceeeeeeecCC-CCEEEEEEECCHHHHHHHHHHH
Confidence 35677889999999999876533 4677777788989999888665
No 277
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=20.21 E-value=5.9e+02 Score=29.39 Aligned_cols=85 Identities=9% Similarity=0.022 Sum_probs=63.0
Q ss_pred EEecHHHHHHHHhhccc---ccccCCCcEEEEcCChHHHHHHHHHHHHHHhCcEEEEec--CCHHHHHHHHHhhcCeEEe
Q 005991 274 AVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFP 348 (666)
Q Consensus 274 V~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~ 348 (666)
..+|.+.+...+..+.. ..++.++|++..+++-..-+ +...++++..|+..+-.. ..+..+...++..++.+++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li 183 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEW-LIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVI 183 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEE
Confidence 45788888776665544 36788999999888755322 233567788888887655 6888999999999999999
Q ss_pred echHHHHHHHH
Q 005991 349 SVPRLYNRIYA 359 (666)
Q Consensus 349 ~~P~~~~~l~~ 359 (666)
.....+..+..
T Consensus 184 ~~~~~~~~l~~ 194 (696)
T PLN02387 184 CDSKQLKKLID 194 (696)
T ss_pred ECHHHHHHHHH
Confidence 88877766544
No 278
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=20.07 E-value=84 Score=23.92 Aligned_cols=22 Identities=14% Similarity=0.262 Sum_probs=14.2
Q ss_pred HHHHHHHHHHhCCCCCCCEEEE
Q 005991 122 ARKEIGSGLLFHGLQKGVRIGL 143 (666)
Q Consensus 122 ~~~~lA~~L~~~gv~~gd~V~i 143 (666)
+...+-..|.+.|+++||.|-|
T Consensus 41 ~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 41 KKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HHTTHHHHHHTTT--TT-EEEE
T ss_pred HHCCHHHHHHHcCCCCCCEEEE
Confidence 4455666788889999999876
Done!