Query 005995
Match_columns 666
No_of_seqs 519 out of 3898
Neff 8.5
Searched_HMMs 46136
Date Thu Mar 28 16:51:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005995.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005995hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0661 AarF Predicted unusual 100.0 1.8E-78 4E-83 658.5 43.3 384 45-461 52-442 (517)
2 PRK04750 ubiB putative ubiquin 100.0 2.1E-74 4.5E-79 631.6 43.7 425 6-463 3-443 (537)
3 TIGR01982 UbiB 2-polyprenylphe 100.0 6.7E-71 1.5E-75 599.5 44.4 382 48-462 47-435 (437)
4 KOG1235 Predicted unusual prot 100.0 9.3E-71 2E-75 594.2 36.3 403 36-455 79-485 (538)
5 KOG1236 Predicted unusual prot 100.0 1.7E-47 3.6E-52 387.5 29.3 373 52-453 122-558 (565)
6 KOG1234 ABC (ATP binding casse 100.0 1.8E-38 3.9E-43 305.8 18.6 351 72-448 2-356 (363)
7 PRK10662 beta-lactam binding p 100.0 3.7E-34 8E-39 306.8 21.0 193 472-666 25-221 (378)
8 PRK11289 ampC beta-lactamase/D 100.0 2.4E-34 5.2E-39 308.0 19.0 183 475-666 28-211 (384)
9 PRK03642 putative periplasmic 100.0 2.6E-32 5.6E-37 297.6 19.6 188 477-666 38-241 (432)
10 PRK13128 D-aminopeptidase; Rev 100.0 4.3E-32 9.4E-37 298.6 18.6 183 479-666 6-191 (518)
11 PF00144 Beta-lactamase: Beta- 100.0 9E-33 2E-37 292.8 11.2 182 482-666 1-182 (329)
12 COG1680 AmpC Beta-lactamase cl 100.0 5.1E-29 1.1E-33 270.5 16.9 169 496-666 54-227 (390)
13 PF03109 ABC1: ABC1 family; I 99.9 2.5E-27 5.5E-32 210.6 7.8 117 108-237 1-119 (119)
14 cd05145 RIO1_like RIO kinase f 99.9 5.2E-21 1.1E-25 186.2 16.0 182 124-346 3-188 (190)
15 cd05147 RIO1_euk RIO kinase fa 99.9 5.3E-21 1.1E-25 185.7 15.2 183 124-346 3-188 (190)
16 smart00090 RIO RIO-like kinase 99.8 4.3E-18 9.3E-23 171.0 15.1 185 124-351 34-224 (237)
17 cd05144 RIO2_C RIO kinase fami 99.7 2.3E-17 5.1E-22 161.7 15.5 170 123-334 20-195 (198)
18 KOG0595 Serine/threonine-prote 99.7 1.7E-17 3.7E-22 169.4 10.9 141 124-321 16-168 (429)
19 cd05119 RIO RIO kinase family, 99.7 2.4E-16 5.2E-21 152.8 16.4 168 124-327 3-173 (187)
20 PRK10359 lipopolysaccharide co 99.7 1.5E-16 3.2E-21 156.7 14.4 142 124-322 37-188 (232)
21 PF01163 RIO1: RIO1 family; I 99.7 8.8E-17 1.9E-21 154.4 9.1 173 134-351 2-182 (188)
22 KOG0605 NDR and related serine 99.7 2.2E-16 4.8E-21 166.3 12.0 149 120-325 142-298 (550)
23 KOG0593 Predicted protein kina 99.7 2.1E-16 4.5E-21 155.3 10.4 148 125-331 9-167 (396)
24 KOG4250 TANK binding protein k 99.6 2.2E-16 4.7E-21 171.2 8.3 151 118-322 13-178 (732)
25 KOG0581 Mitogen-activated prot 99.6 4.4E-16 9.6E-21 157.8 8.8 139 124-321 85-232 (364)
26 cd05146 RIO3_euk RIO kinase fa 99.6 5E-15 1.1E-19 142.7 14.7 177 124-346 3-195 (197)
27 KOG1163 Casein kinase (serine/ 99.6 1.4E-15 2.9E-20 145.1 9.4 137 124-319 21-165 (341)
28 KOG0600 Cdc2-related protein k 99.6 4.7E-16 1E-20 162.4 5.6 166 111-339 112-289 (560)
29 KOG0574 STE20-like serine/thre 99.6 1.6E-16 3.4E-21 155.5 1.8 160 101-323 18-184 (502)
30 PRK09188 serine/threonine prot 99.6 4.9E-15 1.1E-19 156.8 13.1 139 123-320 23-164 (365)
31 PRK14879 serine/threonine prot 99.6 9.9E-15 2.1E-19 144.4 14.2 142 124-319 2-145 (211)
32 KOG0615 Serine/threonine prote 99.6 3E-15 6.6E-20 152.9 9.3 146 123-319 177-330 (475)
33 KOG0661 MAPK related serine/th 99.6 1.5E-15 3.2E-20 157.7 6.9 89 241-332 84-176 (538)
34 COG1718 RIO1 Serine/threonine 99.6 4.8E-14 1E-18 137.4 16.0 186 125-352 55-243 (268)
35 TIGR03724 arch_bud32 Kae1-asso 99.6 7.2E-14 1.6E-18 136.9 16.4 139 126-321 2-142 (199)
36 KOG0659 Cdk activating kinase 99.5 9.8E-15 2.1E-19 141.4 7.8 146 124-325 8-158 (318)
37 KOG0192 Tyrosine kinase specif 99.5 3.3E-14 7.2E-19 150.5 11.4 140 125-320 48-196 (362)
38 KOG0667 Dual-specificity tyros 99.5 4.4E-14 9.6E-19 152.9 12.4 147 124-323 192-346 (586)
39 KOG4236 Serine/threonine prote 99.5 1.2E-14 2.7E-19 151.7 7.8 159 113-325 559-725 (888)
40 KOG0575 Polo-like serine/threo 99.5 6.9E-15 1.5E-19 157.5 5.8 134 124-320 24-170 (592)
41 KOG0592 3-phosphoinositide-dep 99.5 2.3E-14 5E-19 151.1 9.4 142 124-324 79-230 (604)
42 PRK12274 serine/threonine prot 99.5 1.4E-13 3E-18 133.0 13.6 159 123-347 7-166 (218)
43 KOG0594 Protein kinase PCTAIRE 99.5 4.5E-14 9.8E-19 143.1 10.2 148 116-319 11-171 (323)
44 cd05628 STKc_NDR1 Catalytic do 99.5 6.3E-14 1.4E-18 150.7 11.0 141 124-321 7-154 (363)
45 cd05085 PTKc_Fer Catalytic dom 99.5 8.5E-14 1.8E-18 141.0 11.3 138 124-319 1-144 (250)
46 cd05600 STKc_Sid2p_Dbf2p Catal 99.5 6.6E-14 1.4E-18 148.7 10.6 140 124-320 7-153 (333)
47 cd05084 PTKc_Fes Catalytic dom 99.5 9.9E-14 2.2E-18 140.8 11.4 138 124-319 1-145 (252)
48 KOG0663 Protein kinase PITSLRE 99.5 4.1E-14 8.8E-19 141.1 8.1 143 124-321 82-230 (419)
49 cd05571 STKc_PKB Catalytic dom 99.5 8.9E-14 1.9E-18 147.1 11.0 137 125-318 2-145 (323)
50 COG0478 RIO-like serine/threon 99.5 2.2E-13 4.9E-18 133.9 12.8 181 124-350 97-277 (304)
51 cd05627 STKc_NDR2 Catalytic do 99.5 9.4E-14 2E-18 149.2 11.0 140 124-320 7-153 (360)
52 cd05626 STKc_LATS2 Catalytic d 99.5 1E-13 2.3E-18 150.0 11.2 139 124-319 7-152 (381)
53 cd05593 STKc_PKB_gamma Catalyt 99.5 1E-13 2.2E-18 147.0 10.6 137 125-318 2-145 (328)
54 KOG0598 Ribosomal protein S6 k 99.5 1.1E-13 2.3E-18 140.6 10.0 142 119-318 25-175 (357)
55 KOG0583 Serine/threonine prote 99.5 1.9E-13 4.1E-18 145.9 12.4 145 124-319 23-172 (370)
56 cd05096 PTKc_DDR1 Catalytic do 99.5 1.6E-13 3.4E-18 143.7 11.7 138 124-319 11-189 (304)
57 KOG0577 Serine/threonine prote 99.5 3.7E-14 8E-19 150.1 6.6 178 110-344 20-208 (948)
58 cd05590 STKc_nPKC_eta Catalyti 99.5 1.2E-13 2.5E-18 146.0 10.3 138 125-318 2-146 (320)
59 PTZ00263 protein kinase A cata 99.5 1.2E-13 2.7E-18 146.4 10.5 140 124-320 24-170 (329)
60 cd05587 STKc_cPKC Catalytic do 99.5 1.6E-13 3.4E-18 145.2 11.2 138 124-317 6-150 (324)
61 cd05598 STKc_LATS Catalytic do 99.5 1.5E-13 3.2E-18 148.5 11.1 137 124-318 7-151 (376)
62 cd05595 STKc_PKB_beta Catalyti 99.5 1.1E-13 2.4E-18 146.4 9.8 137 125-318 2-145 (323)
63 cd05631 STKc_GRK4 Catalytic do 99.5 2.1E-13 4.6E-18 141.4 11.8 143 124-319 6-153 (285)
64 cd05594 STKc_PKB_alpha Catalyt 99.5 1.8E-13 3.8E-18 144.9 11.1 137 125-318 2-146 (325)
65 cd05601 STKc_CRIK Catalytic do 99.5 1.5E-13 3.2E-18 145.7 10.5 141 124-320 7-154 (330)
66 cd05591 STKc_nPKC_epsilon Cata 99.5 1.8E-13 3.9E-18 144.6 11.1 138 125-318 2-146 (321)
67 KOG0658 Glycogen synthase kina 99.5 4.9E-14 1.1E-18 142.7 6.2 140 122-323 28-181 (364)
68 cd05621 STKc_ROCK2 Catalytic d 99.5 1.8E-13 4E-18 147.5 11.0 138 124-319 49-193 (370)
69 PLN00034 mitogen-activated pro 99.5 2.1E-13 4.6E-18 146.0 11.4 133 124-319 80-219 (353)
70 cd05625 STKc_LATS1 Catalytic d 99.5 2.1E-13 4.6E-18 147.7 11.5 138 124-318 7-151 (382)
71 cd05599 STKc_NDR_like Catalyti 99.5 1.6E-13 3.4E-18 147.7 10.2 140 124-320 7-153 (364)
72 cd05612 STKc_PRKX_like Catalyt 99.5 1.3E-13 2.8E-18 143.5 9.3 140 124-320 7-153 (291)
73 KOG0616 cAMP-dependent protein 99.5 2E-13 4.3E-18 134.2 9.8 145 119-321 44-197 (355)
74 cd05624 STKc_MRCK_beta Catalyt 99.5 2.4E-13 5.1E-18 144.4 11.3 80 239-320 73-154 (331)
75 cd05102 PTKc_VEGFR3 Catalytic 99.5 2.3E-13 5E-18 144.7 11.2 39 279-319 187-225 (338)
76 cd05597 STKc_DMPK_like Catalyt 99.5 2.1E-13 4.6E-18 144.7 10.9 140 124-319 7-153 (331)
77 cd05629 STKc_NDR_like_fungal C 99.5 2.6E-13 5.6E-18 146.7 11.4 140 124-320 7-153 (377)
78 KOG0193 Serine/threonine prote 99.5 1.4E-13 3.1E-18 147.0 8.9 149 114-319 387-539 (678)
79 cd05615 STKc_cPKC_alpha Cataly 99.5 2.3E-13 4.9E-18 144.0 10.4 139 124-318 6-151 (323)
80 cd05585 STKc_YPK1_like Catalyt 99.4 2.7E-13 5.9E-18 142.6 10.9 136 126-318 1-143 (312)
81 cd05592 STKc_nPKC_theta_delta 99.4 2.6E-13 5.7E-18 143.0 10.7 77 239-318 68-146 (316)
82 cd05573 STKc_ROCK_NDR_like Cat 99.4 1.6E-13 3.5E-18 146.5 9.2 140 124-320 7-153 (350)
83 cd05620 STKc_nPKC_delta Cataly 99.4 2.6E-13 5.6E-18 143.1 10.3 137 125-317 2-145 (316)
84 cd05614 STKc_MSK2_N N-terminal 99.4 3.3E-13 7.1E-18 143.3 11.1 140 124-318 6-155 (332)
85 cd05617 STKc_aPKC_zeta Catalyt 99.4 4.3E-13 9.3E-18 142.1 12.0 137 125-317 2-145 (327)
86 cd05616 STKc_cPKC_beta Catalyt 99.4 3.8E-13 8.3E-18 142.2 11.3 139 124-318 6-151 (323)
87 cd05622 STKc_ROCK1 Catalytic d 99.4 3.4E-13 7.5E-18 145.4 11.1 139 124-320 49-194 (371)
88 cd05618 STKc_aPKC_iota Catalyt 99.4 3.4E-13 7.5E-18 143.0 10.9 139 124-318 1-146 (329)
89 cd05588 STKc_aPKC Catalytic do 99.4 3.5E-13 7.5E-18 142.9 10.8 137 125-317 2-145 (329)
90 KOG0591 NIMA (never in mitosis 99.4 1E-13 2.2E-18 135.3 5.9 143 124-322 25-182 (375)
91 cd05115 PTKc_Zap-70 Catalytic 99.4 5.8E-13 1.3E-17 135.9 12.0 138 126-319 3-146 (257)
92 KOG1187 Serine/threonine prote 99.4 1.7E-13 3.7E-18 145.9 8.3 141 120-320 76-229 (361)
93 KOG0578 p21-activated serine/t 99.4 7.7E-13 1.7E-17 140.8 13.1 178 84-322 238-423 (550)
94 cd05604 STKc_SGK3 Catalytic do 99.4 6.1E-13 1.3E-17 140.8 12.3 76 239-317 68-145 (325)
95 cd05596 STKc_ROCK Catalytic do 99.4 3.9E-13 8.5E-18 145.0 10.8 138 124-319 49-193 (370)
96 cd07871 STKc_PCTAIRE3 Catalyti 99.4 3E-13 6.5E-18 140.5 9.4 136 124-318 11-153 (288)
97 cd05584 STKc_p70S6K Catalytic 99.4 4.6E-13 1E-17 141.6 10.6 139 124-318 2-150 (323)
98 cd05602 STKc_SGK1 Catalytic do 99.4 7.4E-13 1.6E-17 140.1 12.1 77 239-318 68-146 (325)
99 cd05608 STKc_GRK1 Catalytic do 99.4 6.4E-13 1.4E-17 137.5 11.3 141 126-320 1-149 (280)
100 cd05151 ChoK Choline Kinase (C 99.4 1.9E-12 4.1E-17 123.3 13.6 128 124-319 4-138 (170)
101 cd05575 STKc_SGK Catalytic dom 99.4 7.7E-13 1.7E-17 139.9 12.0 77 239-318 68-146 (323)
102 cd05603 STKc_SGK2 Catalytic do 99.4 7.9E-13 1.7E-17 139.7 12.0 76 239-317 68-145 (321)
103 cd05589 STKc_PKN Catalytic dom 99.4 5.5E-13 1.2E-17 141.1 10.8 140 124-318 5-151 (324)
104 cd07869 STKc_PFTAIRE1 Catalyti 99.4 4E-13 8.7E-18 140.6 9.2 138 124-318 11-153 (303)
105 KOG0660 Mitogen-activated prot 99.4 1.7E-13 3.6E-18 138.6 5.9 145 123-319 27-176 (359)
106 PTZ00426 cAMP-dependent protei 99.4 5.5E-13 1.2E-17 142.1 10.3 140 124-320 36-183 (340)
107 KOG0597 Serine-threonine prote 99.4 3.2E-13 7E-18 142.7 8.0 140 124-320 8-152 (808)
108 KOG0198 MEKK and related serin 99.4 1.1E-12 2.4E-17 135.0 11.8 79 241-320 90-170 (313)
109 cd05586 STKc_Sck1_like Catalyt 99.4 9.7E-13 2.1E-17 139.5 11.6 77 239-318 68-146 (330)
110 cd07878 STKc_p38beta_MAPK11 Ca 99.4 7.1E-13 1.5E-17 141.3 10.4 157 107-320 3-170 (343)
111 cd05104 PTKc_Kit Catalytic dom 99.4 1.2E-12 2.5E-17 141.5 12.1 40 279-320 227-266 (375)
112 KOG0608 Warts/lats-like serine 99.4 4.8E-13 1E-17 142.7 8.8 142 117-318 630-779 (1034)
113 cd05623 STKc_MRCK_alpha Cataly 99.4 8.9E-13 1.9E-17 140.0 11.0 79 239-319 73-153 (332)
114 PRK13184 pknD serine/threonine 99.4 1E-12 2.3E-17 152.1 11.9 139 124-318 8-163 (932)
115 cd06649 PKc_MEK2 Catalytic dom 99.4 1.1E-12 2.5E-17 139.1 11.3 138 124-320 11-156 (331)
116 cd05108 PTKc_EGFR Catalytic do 99.4 1.1E-12 2.4E-17 138.2 10.9 139 124-320 13-161 (316)
117 KOG0585 Ca2+/calmodulin-depend 99.4 5.4E-13 1.2E-17 138.7 8.0 153 124-319 103-261 (576)
118 cd05064 PTKc_EphR_A10 Catalyti 99.4 1.1E-12 2.4E-17 134.5 10.3 137 124-318 11-157 (266)
119 cd05582 STKc_RSK_N N-terminal 99.4 1.2E-12 2.7E-17 137.9 10.5 138 124-319 2-149 (318)
120 cd06657 STKc_PAK4 Catalytic do 99.4 1.3E-12 2.7E-17 136.2 10.4 138 124-320 26-168 (292)
121 cd05607 STKc_GRK7 Catalytic do 99.4 1.9E-12 4E-17 133.8 11.5 138 126-319 1-146 (277)
122 PRK09605 bifunctional UGMP fam 99.4 5.5E-12 1.2E-16 142.4 16.3 141 122-320 337-479 (535)
123 cd06629 STKc_MAPKKK_Bck1_like 99.4 2.2E-12 4.7E-17 132.5 11.8 152 118-319 1-159 (272)
124 cd05605 STKc_GRK4_like Catalyt 99.4 1.9E-12 4.1E-17 134.3 11.4 143 124-319 6-153 (285)
125 cd05619 STKc_nPKC_theta Cataly 99.4 1.5E-12 3.2E-17 137.3 10.7 137 125-317 2-145 (316)
126 cd05632 STKc_GRK5 Catalytic do 99.4 2.3E-12 4.9E-17 133.7 11.9 143 124-319 6-153 (285)
127 cd05033 PTKc_EphR Catalytic do 99.4 2.1E-12 4.5E-17 132.3 11.4 139 123-319 9-157 (266)
128 PF00069 Pkinase: Protein kina 99.4 1.5E-12 3.2E-17 132.5 10.2 139 124-318 5-148 (260)
129 cd05068 PTKc_Frk_like Catalyti 99.4 1.3E-12 2.8E-17 133.5 9.7 136 124-319 12-154 (261)
130 cd05109 PTKc_HER2 Catalytic do 99.4 2.1E-12 4.5E-17 133.3 11.3 138 124-319 13-160 (279)
131 cd07872 STKc_PCTAIRE2 Catalyti 99.4 1.1E-12 2.4E-17 137.7 9.1 138 124-318 12-154 (309)
132 PTZ00267 NIMA-related protein 99.4 2.3E-12 4.9E-17 143.7 11.8 139 123-320 72-221 (478)
133 KOG0032 Ca2+/calmodulin-depend 99.4 2.6E-12 5.6E-17 137.3 11.7 145 124-320 41-191 (382)
134 KOG0197 Tyrosine kinases [Sign 99.4 1E-12 2.2E-17 139.5 8.3 138 124-321 212-356 (468)
135 cd06641 STKc_MST3 Catalytic do 99.4 3E-12 6.4E-17 132.1 11.8 145 114-320 2-153 (277)
136 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.4 2.6E-12 5.7E-17 132.9 11.4 138 124-320 10-160 (284)
137 cd06640 STKc_MST4 Catalytic do 99.4 2.8E-12 6E-17 132.3 11.2 144 115-320 3-153 (277)
138 cd05114 PTKc_Tec_Rlk Catalytic 99.4 2.4E-12 5.1E-17 131.1 10.5 136 124-319 10-151 (256)
139 cd06642 STKc_STK25-YSK1 Cataly 99.4 1.4E-12 3E-17 134.6 8.8 144 115-320 3-153 (277)
140 cd05113 PTKc_Btk_Bmx Catalytic 99.4 2.3E-12 5.1E-17 131.3 10.3 136 124-319 10-151 (256)
141 cd05041 PTKc_Fes_like Catalyti 99.4 3.5E-12 7.5E-17 129.3 11.5 138 124-319 1-144 (251)
142 cd05070 PTKc_Fyn_Yrk Catalytic 99.4 3.3E-12 7.2E-17 130.3 11.4 139 124-320 12-154 (260)
143 cd05633 STKc_GRK3 Catalytic do 99.4 5.5E-12 1.2E-16 130.4 13.0 78 239-319 69-148 (279)
144 cd05570 STKc_PKC Catalytic dom 99.4 2.3E-12 5.1E-17 135.9 10.4 137 125-317 2-145 (318)
145 cd05069 PTKc_Yes Catalytic dom 99.4 3.5E-12 7.5E-17 130.3 11.3 138 124-319 12-153 (260)
146 cd05112 PTKc_Itk Catalytic dom 99.4 2.6E-12 5.5E-17 130.7 10.2 136 124-319 10-151 (256)
147 cd05059 PTKc_Tec_like Catalyti 99.4 2.5E-12 5.3E-17 131.0 10.1 136 124-319 10-151 (256)
148 cd05079 PTKc_Jak1_rpt2 Catalyt 99.4 3.6E-12 7.8E-17 132.0 11.5 140 124-319 10-160 (284)
149 cd06650 PKc_MEK1 Catalytic dom 99.4 3.5E-12 7.6E-17 135.5 11.6 137 124-319 11-155 (333)
150 KOG0611 Predicted serine/threo 99.4 1.2E-12 2.6E-17 133.2 7.5 140 124-318 59-203 (668)
151 cd06635 STKc_TAO1 Catalytic do 99.4 7.1E-12 1.5E-16 132.1 13.8 159 105-320 14-177 (317)
152 cd00192 PTKc Catalytic domain 99.4 3.6E-12 7.8E-17 129.5 11.2 140 124-321 1-158 (262)
153 cd05609 STKc_MAST Catalytic do 99.4 3.9E-12 8.5E-17 133.2 11.8 137 124-317 7-150 (305)
154 cd05105 PTKc_PDGFR_alpha Catal 99.3 5.2E-12 1.1E-16 137.3 12.9 39 279-319 250-288 (400)
155 cd05063 PTKc_EphR_A2 Catalytic 99.3 3.7E-12 7.9E-17 130.6 11.0 140 123-320 10-159 (268)
156 PRK01723 3-deoxy-D-manno-octul 99.3 1.4E-11 3E-16 124.1 14.9 146 124-319 37-193 (239)
157 COG3642 Mn2+-dependent serine/ 99.3 3.3E-11 7.1E-16 112.3 16.0 138 124-318 2-141 (204)
158 cd05071 PTKc_Src Catalytic dom 99.3 3.5E-12 7.6E-17 130.5 10.4 137 124-320 12-154 (262)
159 KOG0610 Putative serine/threon 99.3 1.9E-12 4.1E-17 132.9 8.2 139 124-318 83-229 (459)
160 KOG1165 Casein kinase (serine/ 99.3 2.6E-12 5.7E-17 128.1 8.9 137 124-319 34-180 (449)
161 cd05610 STKc_MASTL Catalytic d 99.3 3.2E-12 7E-17 147.9 11.0 139 124-319 10-155 (669)
162 cd05103 PTKc_VEGFR2 Catalytic 99.3 4.2E-12 9.1E-17 135.5 11.0 38 279-318 192-229 (343)
163 cd07848 STKc_CDKL5 Catalytic d 99.3 2.5E-12 5.4E-17 133.3 8.9 141 124-320 7-152 (287)
164 KOG0201 Serine/threonine prote 99.3 7.9E-13 1.7E-17 136.6 5.0 152 113-324 10-167 (467)
165 cd05034 PTKc_Src_like Catalyti 99.3 4.5E-12 9.8E-17 129.2 10.6 137 124-320 12-155 (261)
166 cd06644 STKc_STK10_LOK Catalyt 99.3 6.7E-12 1.4E-16 130.5 12.0 143 115-318 11-160 (292)
167 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.3 6.7E-12 1.5E-16 129.8 11.9 137 124-320 10-159 (283)
168 cd05067 PTKc_Lck_Blk Catalytic 99.3 5.5E-12 1.2E-16 128.7 11.1 138 124-319 12-153 (260)
169 smart00219 TyrKc Tyrosine kina 99.3 5.1E-12 1.1E-16 128.2 10.8 140 124-321 5-156 (258)
170 cd05097 PTKc_DDR_like Catalyti 99.3 4.1E-12 9E-17 132.4 10.3 138 124-319 11-180 (295)
171 cd07876 STKc_JNK2 Catalytic do 99.3 7.7E-12 1.7E-16 134.3 12.7 136 124-318 27-173 (359)
172 cd07874 STKc_JNK3 Catalytic do 99.3 7.9E-12 1.7E-16 133.9 12.7 73 241-319 96-170 (355)
173 cd05072 PTKc_Lyn Catalytic dom 99.3 7.1E-12 1.5E-16 127.9 11.6 137 124-320 12-155 (261)
174 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.3 6.4E-12 1.4E-16 129.0 11.2 136 125-318 2-150 (269)
175 cd06646 STKc_MAP4K5 Catalytic 99.3 5.7E-12 1.2E-16 129.0 10.7 136 124-319 15-157 (267)
176 cd05122 PKc_STE Catalytic doma 99.3 7E-12 1.5E-16 126.4 11.1 139 124-321 6-151 (253)
177 PTZ00283 serine/threonine prot 99.3 6.4E-12 1.4E-16 140.5 11.8 76 242-319 114-194 (496)
178 KOG0694 Serine/threonine prote 99.3 3.3E-12 7.1E-17 138.8 9.0 138 124-318 374-518 (694)
179 KOG0582 Ste20-like serine/thre 99.3 5.4E-12 1.2E-16 130.6 10.1 140 124-319 32-177 (516)
180 cd06631 STKc_YSK4 Catalytic do 99.3 8.4E-12 1.8E-16 127.6 11.7 141 124-318 6-152 (265)
181 cd07873 STKc_PCTAIRE1 Catalyti 99.3 3.7E-12 8.1E-17 133.1 9.2 136 124-318 12-154 (301)
182 cd05040 PTKc_Ack_like Catalyti 99.3 6.5E-12 1.4E-16 127.8 10.7 140 125-320 2-149 (257)
183 cd05090 PTKc_Ror1 Catalytic do 99.3 7.7E-12 1.7E-16 129.4 11.4 138 124-319 11-175 (283)
184 cd05630 STKc_GRK6 Catalytic do 99.3 7E-12 1.5E-16 130.1 11.0 143 124-319 6-153 (285)
185 cd05066 PTKc_EphR_A Catalytic 99.3 6.3E-12 1.4E-16 128.9 10.5 141 124-320 10-158 (267)
186 cd05106 PTKc_CSF-1R Catalytic 99.3 8.5E-12 1.9E-16 134.7 12.0 50 268-319 212-263 (374)
187 cd05057 PTKc_EGFR_like Catalyt 99.3 8.3E-12 1.8E-16 128.9 11.4 140 124-319 13-160 (279)
188 cd07862 STKc_CDK6 Catalytic do 99.3 4.8E-12 1E-16 131.3 9.6 77 240-319 82-161 (290)
189 cd05580 STKc_PKA Catalytic dom 99.3 7.8E-12 1.7E-16 129.9 10.9 141 124-321 7-154 (290)
190 PHA03212 serine/threonine kina 99.3 8.1E-12 1.7E-16 135.6 11.4 128 124-318 98-232 (391)
191 KOG0587 Traf2- and Nck-interac 99.3 5E-12 1.1E-16 140.3 9.8 152 112-324 15-179 (953)
192 cd06611 STKc_SLK_like Catalyti 99.3 9.4E-12 2E-16 128.5 11.2 137 124-319 11-154 (280)
193 cd06625 STKc_MEKK3_like Cataly 99.3 1.1E-11 2.3E-16 126.5 11.5 142 123-319 7-155 (263)
194 cd05037 PTK_Jak_rpt1 Pseudokin 99.3 7.9E-12 1.7E-16 127.1 10.4 81 240-320 73-160 (259)
195 cd06917 STKc_NAK1_like Catalyt 99.3 1.3E-11 2.9E-16 127.0 12.2 142 124-320 7-153 (277)
196 cd05065 PTKc_EphR_B Catalytic 99.3 9.1E-12 2E-16 127.7 10.8 138 124-319 10-157 (269)
197 cd05116 PTKc_Syk Catalytic dom 99.3 1.1E-11 2.3E-16 126.4 11.2 137 125-319 2-146 (257)
198 PHA03211 serine/threonine kina 99.3 5.4E-12 1.2E-16 139.2 9.5 130 124-319 175-311 (461)
199 cd08529 STKc_FA2-like Catalyti 99.3 1.2E-11 2.5E-16 125.7 11.3 140 124-320 6-153 (256)
200 cd05606 STKc_beta_ARK Catalyti 99.3 1.5E-11 3.4E-16 127.0 12.4 78 239-319 69-148 (278)
201 cd05061 PTKc_InsR Catalytic do 99.3 1.4E-11 3E-16 127.9 12.2 138 124-319 12-170 (288)
202 cd05042 PTKc_Aatyk Catalytic d 99.3 9.9E-12 2.2E-16 127.5 10.9 78 239-318 67-150 (269)
203 cd00180 PKc Catalytic domain o 99.3 1.5E-11 3.2E-16 119.7 11.6 139 126-321 1-146 (215)
204 PHA03209 serine/threonine kina 99.3 4.7E-12 1E-16 135.9 8.9 128 124-317 72-206 (357)
205 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.3 7.6E-12 1.7E-16 129.0 10.1 80 239-318 88-174 (274)
206 cd07859 STKc_TDY_MAPK_plant Ca 99.3 8.3E-12 1.8E-16 132.6 10.6 138 124-318 6-153 (338)
207 cd05049 PTKc_Trk Catalytic dom 99.3 8.6E-12 1.9E-16 128.6 10.3 137 124-318 11-172 (280)
208 cd05088 PTKc_Tie2 Catalytic do 99.3 1.4E-11 3.1E-16 128.9 12.0 137 124-317 13-173 (303)
209 cd05083 PTKc_Chk Catalytic dom 99.3 1.2E-11 2.5E-16 125.9 10.9 136 124-318 12-150 (254)
210 cd06656 STKc_PAK3 Catalytic do 99.3 9.3E-12 2E-16 129.9 10.4 136 124-320 25-167 (297)
211 cd05581 STKc_PDK1 Catalytic do 99.3 6E-12 1.3E-16 129.5 8.9 142 124-321 7-155 (280)
212 KOG1989 ARK protein kinase fam 99.3 1.5E-11 3.2E-16 137.6 12.5 112 243-356 118-241 (738)
213 PRK10345 hypothetical protein; 99.3 2.3E-11 4.9E-16 119.5 12.4 141 122-318 6-159 (210)
214 cd07880 STKc_p38gamma_MAPK12 C 99.3 1.5E-11 3.3E-16 131.1 11.9 156 107-319 3-169 (343)
215 cd06605 PKc_MAPKK Catalytic do 99.3 7.7E-12 1.7E-16 127.8 9.2 140 124-321 7-154 (265)
216 PF06176 WaaY: Lipopolysacchar 99.3 3.7E-11 8.1E-16 116.4 13.3 70 239-318 115-184 (229)
217 cd06619 PKc_MKK5 Catalytic dom 99.3 1.6E-11 3.4E-16 126.9 11.5 134 124-320 7-147 (279)
218 cd05054 PTKc_VEGFR Catalytic d 99.3 1.4E-11 3.1E-16 131.1 11.3 51 267-319 172-224 (337)
219 cd05062 PTKc_IGF-1R Catalytic 99.3 1.6E-11 3.5E-16 126.6 11.4 138 124-319 12-170 (277)
220 cd06624 STKc_ASK Catalytic dom 99.3 1.7E-11 3.7E-16 125.7 11.4 139 123-319 13-160 (268)
221 cd05073 PTKc_Hck Catalytic dom 99.3 2.1E-11 4.6E-16 124.4 12.1 139 124-319 12-153 (260)
222 cd05056 PTKc_FAK Catalytic dom 99.3 1.5E-11 3.2E-16 126.3 10.9 139 124-320 12-159 (270)
223 cd05048 PTKc_Ror Catalytic Dom 99.3 1.6E-11 3.5E-16 126.8 11.3 137 124-318 11-174 (283)
224 cd05075 PTKc_Axl Catalytic dom 99.3 1.7E-11 3.6E-16 125.9 11.3 139 124-319 5-163 (272)
225 cd06643 STKc_SLK Catalytic dom 99.3 2.1E-11 4.6E-16 126.0 12.0 137 124-319 11-154 (282)
226 cd05082 PTKc_Csk Catalytic dom 99.3 1.6E-11 3.5E-16 124.9 11.0 136 124-319 12-153 (256)
227 KOG1094 Discoidin domain recep 99.3 5E-12 1.1E-16 134.2 7.2 137 124-318 544-687 (807)
228 cd05101 PTKc_FGFR2 Catalytic d 99.3 1.9E-11 4.2E-16 127.9 11.7 80 239-320 93-189 (304)
229 PTZ00036 glycogen synthase kin 99.3 1.7E-11 3.6E-16 135.3 11.7 75 243-319 143-222 (440)
230 cd07875 STKc_JNK1 Catalytic do 99.3 2E-11 4.3E-16 131.4 12.0 73 241-319 103-177 (364)
231 cd05038 PTKc_Jak_rpt2 Catalyti 99.3 1.6E-11 3.4E-16 126.7 10.8 138 124-319 10-160 (284)
232 cd06645 STKc_MAP4K3 Catalytic 99.3 1.4E-11 3E-16 126.2 10.2 138 124-319 15-157 (267)
233 cd05611 STKc_Rim15_like Cataly 99.3 2.5E-11 5.5E-16 123.7 12.0 77 240-319 70-148 (260)
234 cd05095 PTKc_DDR2 Catalytic do 99.3 1.6E-11 3.5E-16 128.0 10.7 79 239-319 91-181 (296)
235 cd05077 PTK_Jak1_rpt1 Pseudoki 99.3 2E-11 4.3E-16 125.0 11.2 80 239-318 76-162 (262)
236 cd08224 STKc_Nek6_Nek7 Catalyt 99.3 1.6E-11 3.4E-16 125.5 10.3 141 124-320 8-158 (267)
237 KOG0662 Cyclin-dependent kinas 99.3 6.9E-12 1.5E-16 114.7 6.7 137 124-321 8-154 (292)
238 cd06627 STKc_Cdc7_like Catalyt 99.3 2E-11 4.3E-16 123.6 10.9 141 124-322 6-153 (254)
239 KOG0588 Serine/threonine prote 99.3 9.1E-12 2E-16 134.4 8.7 134 124-317 18-161 (786)
240 cd07844 STKc_PCTAIRE_like Cata 99.3 1E-11 2.2E-16 129.0 8.9 136 124-318 11-153 (291)
241 cd05039 PTKc_Csk_like Catalyti 99.3 2.6E-11 5.7E-16 123.3 11.8 138 124-320 12-154 (256)
242 cd05577 STKc_GRK Catalytic dom 99.3 1.7E-11 3.7E-16 126.4 10.5 140 126-319 1-146 (277)
243 cd07836 STKc_Pho85 Catalytic d 99.3 1.6E-11 3.5E-16 126.9 10.3 137 124-319 6-151 (284)
244 cd07863 STKc_CDK4 Catalytic do 99.3 1.4E-11 3.1E-16 127.5 10.0 141 124-319 6-159 (288)
245 cd05060 PTKc_Syk_like Catalyti 99.3 2.6E-11 5.7E-16 123.4 11.7 138 125-319 2-146 (257)
246 PLN03225 Serine/threonine-prot 99.3 2.4E-11 5.2E-16 137.4 12.5 79 240-319 208-307 (566)
247 cd06615 PKc_MEK Catalytic doma 99.3 2.1E-11 4.5E-16 128.0 11.1 139 124-319 7-151 (308)
248 cd05098 PTKc_FGFR1 Catalytic d 99.3 2.4E-11 5.3E-16 127.3 11.7 139 124-319 24-191 (307)
249 cd05089 PTKc_Tie1 Catalytic do 99.3 2.7E-11 5.8E-16 126.4 11.9 137 124-317 8-168 (297)
250 PHA02988 hypothetical protein; 99.3 2.2E-11 4.7E-16 126.3 11.1 140 122-319 24-174 (283)
251 cd06613 STKc_MAP4K3_like Catal 99.3 2.2E-11 4.7E-16 124.1 10.9 138 124-320 9-153 (262)
252 cd07861 STKc_CDK1_euk Catalyti 99.3 1.2E-11 2.6E-16 127.9 9.0 138 124-319 6-152 (285)
253 cd07853 STKc_NLK Catalytic dom 99.3 1.1E-11 2.3E-16 133.9 9.0 75 241-319 78-154 (372)
254 cd06628 STKc_MAPKKK_Byr2_like 99.3 3.2E-11 6.9E-16 123.4 12.0 145 124-319 6-157 (267)
255 cd05047 PTKc_Tie Catalytic dom 99.3 3.8E-11 8.2E-16 123.4 12.6 136 125-317 2-161 (270)
256 cd08228 STKc_Nek6 Catalytic do 99.3 2.2E-11 4.7E-16 124.6 10.8 141 124-320 8-158 (267)
257 cd06659 STKc_PAK6 Catalytic do 99.3 1.9E-11 4.2E-16 127.6 10.5 78 239-320 90-169 (297)
258 cd05579 STKc_MAST_like Catalyt 99.3 1.7E-11 3.6E-16 124.9 9.8 76 240-318 66-143 (265)
259 cd06658 STKc_PAK5 Catalytic do 99.3 1.2E-11 2.5E-16 128.9 8.8 77 239-319 91-169 (292)
260 cd05613 STKc_MSK1_N N-terminal 99.3 2.3E-11 5E-16 126.3 11.0 142 124-320 6-157 (290)
261 PF07714 Pkinase_Tyr: Protein 99.3 1.9E-11 4.1E-16 124.9 10.2 137 124-318 5-153 (259)
262 KOG0580 Serine/threonine prote 99.3 1.6E-12 3.4E-17 124.5 1.9 156 120-330 23-186 (281)
263 cd06637 STKc_TNIK Catalytic do 99.3 2E-11 4.3E-16 125.3 10.2 77 242-320 84-163 (272)
264 cd06654 STKc_PAK1 Catalytic do 99.3 1.8E-11 3.9E-16 127.7 10.0 136 124-320 26-168 (296)
265 cd07847 STKc_CDKL1_4 Catalytic 99.3 1.6E-11 3.5E-16 126.9 9.5 141 124-320 7-152 (286)
266 cd05110 PTKc_HER4 Catalytic do 99.3 2.1E-11 4.5E-16 127.7 10.4 139 124-320 13-161 (303)
267 cd06632 STKc_MEKK1_plant Catal 99.3 1.9E-11 4E-16 124.2 9.8 142 123-320 5-154 (258)
268 cd05111 PTK_HER3 Pseudokinase 99.3 2.7E-11 5.9E-16 125.2 11.1 80 239-320 80-161 (279)
269 cd08219 STKc_Nek3 Catalytic do 99.3 2.9E-11 6.4E-16 122.9 11.2 141 124-320 6-152 (255)
270 cd08229 STKc_Nek7 Catalytic do 99.3 2.1E-11 4.6E-16 124.7 10.2 139 124-319 8-157 (267)
271 cd05035 PTKc_Axl_like Catalyti 99.3 3.1E-11 6.8E-16 123.8 11.5 76 242-319 82-164 (273)
272 cd05036 PTKc_ALK_LTK Catalytic 99.2 3.4E-11 7.5E-16 124.2 11.6 140 124-319 12-170 (277)
273 cd06638 STKc_myosinIIIA Cataly 99.2 3.8E-11 8.3E-16 124.2 12.0 138 124-320 24-176 (286)
274 cd06623 PKc_MAPKK_plant_like C 99.2 3.5E-11 7.7E-16 122.6 11.6 138 124-320 7-152 (264)
275 cd05574 STKc_phototropin_like 99.2 2.6E-11 5.7E-16 127.6 10.8 141 124-320 7-155 (316)
276 cd05107 PTKc_PDGFR_beta Cataly 99.2 4.1E-11 9E-16 130.3 12.5 38 279-318 252-289 (401)
277 cd05055 PTKc_PDGFR Catalytic d 99.2 3.2E-11 6.9E-16 126.3 11.3 140 123-319 40-192 (302)
278 cd06639 STKc_myosinIIIB Cataly 99.2 4.3E-11 9.4E-16 124.3 12.2 137 124-319 28-179 (291)
279 cd07868 STKc_CDK8 Catalytic do 99.2 2.8E-11 6.1E-16 127.4 10.9 141 121-319 4-163 (317)
280 cd07832 STKc_CCRK Catalytic do 99.2 2.1E-11 4.5E-16 126.1 9.7 138 124-320 6-151 (286)
281 cd07870 STKc_PFTAIRE2 Catalyti 99.2 2.2E-11 4.7E-16 126.5 9.8 136 124-318 11-153 (291)
282 cd05052 PTKc_Abl Catalytic dom 99.2 3.1E-11 6.8E-16 123.4 10.8 140 124-320 12-156 (263)
283 cd06622 PKc_MAPKK_PBS2_like Ca 99.2 2.2E-11 4.8E-16 126.1 9.7 78 240-319 72-154 (286)
284 KOG0612 Rho-associated, coiled 99.2 1.7E-11 3.6E-16 139.4 9.1 76 240-319 148-226 (1317)
285 cd06617 PKc_MKK3_6 Catalytic d 99.2 2.9E-11 6.2E-16 124.9 10.3 139 124-320 7-156 (283)
286 cd05091 PTKc_Ror2 Catalytic do 99.2 3E-11 6.4E-16 124.9 10.4 79 240-320 81-176 (283)
287 cd08223 STKc_Nek4 Catalytic do 99.2 4.5E-11 9.8E-16 121.5 11.6 141 124-319 6-153 (257)
288 cd05583 STKc_MSK_N N-terminal 99.2 2.7E-11 6E-16 125.6 10.1 141 124-319 6-156 (288)
289 cd06612 STKc_MST1_2 Catalytic 99.2 4.3E-11 9.3E-16 121.5 11.2 137 124-321 9-152 (256)
290 cd06633 STKc_TAO3 Catalytic do 99.2 4.2E-11 9.2E-16 126.0 11.3 153 110-318 15-171 (313)
291 cd06655 STKc_PAK2 Catalytic do 99.2 3.6E-11 7.7E-16 125.5 10.5 136 124-320 25-167 (296)
292 cd05148 PTKc_Srm_Brk Catalytic 99.2 2.7E-11 5.9E-16 123.5 9.4 138 124-320 12-156 (261)
293 cd06636 STKc_MAP4K4_6 Catalyti 99.2 6.3E-11 1.4E-15 122.4 12.2 77 241-319 93-172 (282)
294 cd05051 PTKc_DDR Catalytic dom 99.2 6.1E-11 1.3E-15 123.4 12.1 79 239-319 91-181 (296)
295 cd07867 STKc_CDC2L6 Catalytic 99.2 4.7E-11 1E-15 125.5 11.4 142 121-320 4-164 (317)
296 cd07839 STKc_CDK5 Catalytic do 99.2 1.8E-11 4E-16 126.5 8.0 138 124-319 6-150 (284)
297 PHA03207 serine/threonine kina 99.2 2.1E-11 4.5E-16 132.6 8.8 131 124-320 98-237 (392)
298 cd07841 STKc_CDK7 Catalytic do 99.2 2.2E-11 4.8E-16 126.9 8.6 145 124-320 6-154 (298)
299 KOG1167 Serine/threonine prote 99.2 1.7E-11 3.6E-16 126.4 7.4 135 124-318 42-183 (418)
300 cd05120 APH_ChoK_like Aminogly 99.2 8.7E-11 1.9E-15 108.6 11.7 131 124-320 4-141 (155)
301 cd05572 STKc_cGK_PKG Catalytic 99.2 6E-11 1.3E-15 121.1 11.6 139 126-321 1-146 (262)
302 cd05099 PTKc_FGFR4 Catalytic d 99.2 5.9E-11 1.3E-15 124.9 11.9 80 239-320 90-186 (314)
303 cd06610 STKc_OSR1_SPAK Catalyt 99.2 5E-11 1.1E-15 121.7 11.0 139 124-320 7-154 (267)
304 cd06607 STKc_TAO Catalytic dom 99.2 7E-11 1.5E-15 123.9 12.3 150 113-319 12-166 (307)
305 cd06608 STKc_myosinIII_like Ca 99.2 7.4E-11 1.6E-15 120.9 12.1 138 124-320 12-165 (275)
306 cd07837 STKc_CdkB_plant Cataly 99.2 5.3E-11 1.2E-15 123.7 11.2 143 124-319 7-162 (295)
307 cd05058 PTKc_Met_Ron Catalytic 99.2 4.7E-11 1E-15 121.8 10.5 78 240-319 70-149 (262)
308 cd06652 STKc_MEKK2 Catalytic d 99.2 6.3E-11 1.4E-15 121.2 11.4 141 124-319 8-157 (265)
309 cd06614 STKc_PAK Catalytic dom 99.2 6.8E-11 1.5E-15 122.5 11.8 147 114-320 17-168 (286)
310 cd05578 STKc_Yank1 Catalytic d 99.2 2.5E-11 5.5E-16 123.5 8.4 141 124-321 6-153 (258)
311 cd06630 STKc_MEKK1 Catalytic d 99.2 5E-11 1.1E-15 122.0 10.6 144 124-320 6-156 (268)
312 cd06606 STKc_MAPKKK Catalytic 99.2 6.1E-11 1.3E-15 120.0 11.1 140 124-321 6-154 (260)
313 cd05086 PTKc_Aatyk2 Catalytic 99.2 6.1E-11 1.3E-15 121.7 11.2 76 240-317 68-148 (268)
314 PTZ00284 protein kinase; Provi 99.2 3.6E-11 7.9E-16 133.8 10.2 143 124-317 135-297 (467)
315 cd05050 PTKc_Musk Catalytic do 99.2 5.3E-11 1.2E-15 123.4 10.8 137 124-318 11-180 (288)
316 cd06620 PKc_MAPKK_Byr1_like Ca 99.2 4.8E-11 1E-15 123.6 10.3 137 124-319 11-155 (284)
317 cd08217 STKc_Nek2 Catalytic do 99.2 5.2E-11 1.1E-15 121.3 10.3 140 124-320 6-162 (265)
318 KOG1166 Mitotic checkpoint ser 99.2 3.4E-11 7.3E-16 138.9 9.8 141 124-318 704-851 (974)
319 KOG1095 Protein tyrosine kinas 99.2 2.7E-11 5.9E-16 139.7 9.1 137 124-318 698-852 (1025)
320 cd07879 STKc_p38delta_MAPK13 C 99.2 8.6E-11 1.9E-15 125.3 12.0 152 109-319 5-168 (342)
321 cd07833 STKc_CDKL Catalytic do 99.2 3.8E-11 8.1E-16 124.3 8.8 143 124-321 7-153 (288)
322 KOG0194 Protein tyrosine kinas 99.2 5E-11 1.1E-15 128.5 9.9 140 124-319 163-313 (474)
323 cd07850 STKc_JNK Catalytic dom 99.2 5.7E-11 1.2E-15 127.3 10.4 74 241-320 95-170 (353)
324 KOG1164 Casein kinase (serine/ 99.2 5.9E-11 1.3E-15 125.4 10.4 140 123-316 23-175 (322)
325 cd07843 STKc_CDC2L1 Catalytic 99.2 5.5E-11 1.2E-15 123.7 9.9 139 124-320 11-158 (293)
326 cd06648 STKc_PAK_II Catalytic 99.2 7.8E-11 1.7E-15 122.2 11.0 137 124-319 25-166 (285)
327 cd05045 PTKc_RET Catalytic dom 99.2 7.9E-11 1.7E-15 122.3 11.0 138 124-319 6-178 (290)
328 cd08227 PK_STRAD_alpha Pseudok 99.2 9.1E-11 2E-15 124.3 11.6 77 239-317 71-150 (327)
329 cd06653 STKc_MEKK3_like_1 Cata 99.2 6.1E-11 1.3E-15 121.3 9.9 141 124-319 8-157 (264)
330 cd06626 STKc_MEKK4 Catalytic d 99.2 6.5E-11 1.4E-15 120.7 10.0 139 124-320 6-151 (264)
331 cd08221 STKc_Nek9 Catalytic do 99.2 8.2E-11 1.8E-15 119.6 10.7 139 124-320 6-153 (256)
332 cd06609 STKc_MST3_like Catalyt 99.2 1.1E-10 2.3E-15 120.2 11.7 140 124-321 7-151 (274)
333 cd05053 PTKc_FGFR Catalytic do 99.2 1.3E-10 2.8E-15 120.8 12.4 141 124-319 18-183 (293)
334 cd07846 STKc_CDKL2_3 Catalytic 99.2 3.4E-11 7.4E-16 124.5 8.0 139 124-320 7-152 (286)
335 cd07845 STKc_CDK10 Catalytic d 99.2 5.4E-11 1.2E-15 124.8 9.5 142 124-320 13-160 (309)
336 KOG2270 Serine/threonine prote 99.2 5.1E-10 1.1E-14 114.2 15.9 202 104-351 134-340 (520)
337 cd05100 PTKc_FGFR3 Catalytic d 99.2 1E-10 2.2E-15 124.2 11.5 79 239-319 90-185 (334)
338 cd05032 PTKc_InsR_like Catalyt 99.2 1E-10 2.2E-15 120.4 11.2 138 124-319 12-170 (277)
339 cd05046 PTK_CCK4 Pseudokinase 99.2 1.6E-10 3.4E-15 118.9 12.4 137 124-318 11-167 (275)
340 cd06621 PKc_MAPKK_Pek1_like Ca 99.2 1.1E-10 2.4E-15 121.1 11.4 140 124-319 7-156 (287)
341 cd05094 PTKc_TrkC Catalytic do 99.2 1.1E-10 2.3E-15 121.4 11.2 137 124-319 11-174 (291)
342 cd07860 STKc_CDK2_3 Catalytic 99.2 3.7E-11 8E-16 124.2 7.6 138 124-319 6-151 (284)
343 cd08215 STKc_Nek Catalytic dom 99.2 9.6E-11 2.1E-15 118.6 10.3 142 124-320 6-155 (258)
344 cd07877 STKc_p38alpha_MAPK14 C 99.2 1.1E-10 2.3E-15 124.8 11.1 139 124-319 23-171 (345)
345 PLN03224 probable serine/threo 99.2 1.5E-10 3.3E-15 128.0 12.5 77 240-318 258-359 (507)
346 cd08220 STKc_Nek8 Catalytic do 99.2 8.9E-11 1.9E-15 119.1 9.9 140 124-320 6-154 (256)
347 cd07840 STKc_CDK9_like Catalyt 99.2 7E-11 1.5E-15 122.0 9.2 142 124-321 5-153 (287)
348 cd06647 STKc_PAK_I Catalytic d 99.2 1E-10 2.2E-15 121.9 10.3 136 124-320 25-167 (293)
349 cd05093 PTKc_TrkB Catalytic do 99.2 1.6E-10 3.4E-15 120.0 11.6 79 239-319 79-171 (288)
350 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.2 4.2E-11 9.1E-16 122.1 7.2 81 239-319 71-159 (258)
351 cd06634 STKc_TAO2 Catalytic do 99.2 1.6E-10 3.4E-15 121.4 11.7 155 110-320 9-167 (308)
352 PLN00009 cyclin-dependent kina 99.2 9.1E-11 2E-15 122.0 9.8 138 124-318 8-153 (294)
353 smart00221 STYKc Protein kinas 99.2 1.2E-10 2.7E-15 115.2 10.3 140 124-321 5-151 (225)
354 PHA03390 pk1 serine/threonine- 99.2 1.8E-10 3.9E-15 118.3 11.3 79 239-320 81-162 (267)
355 cd05123 STKc_AGC Catalytic dom 99.1 1.6E-10 3.5E-15 116.8 10.6 78 240-320 66-145 (250)
356 cd07864 STKc_CDK12 Catalytic d 99.1 7.2E-11 1.6E-15 123.2 8.3 141 124-320 13-168 (302)
357 cd05044 PTKc_c-ros Catalytic d 99.1 9.9E-11 2.2E-15 119.9 8.9 81 239-319 71-162 (269)
358 KOG0199 ACK and related non-re 99.1 4.2E-11 9.1E-16 129.6 6.2 139 125-321 117-265 (1039)
359 PTZ00024 cyclin-dependent prot 99.1 9.6E-11 2.1E-15 124.4 9.1 151 124-319 15-170 (335)
360 KOG0983 Mitogen-activated prot 99.1 8.7E-11 1.9E-15 114.5 7.8 79 239-321 163-245 (391)
361 cd07835 STKc_CDK1_like Catalyt 99.1 9E-11 1.9E-15 121.2 8.6 138 124-319 5-150 (283)
362 PTZ00266 NIMA-related protein 99.1 1.6E-10 3.4E-15 134.9 11.4 141 124-318 19-192 (1021)
363 cd06651 STKc_MEKK3 Catalytic d 99.1 1.6E-10 3.5E-15 118.4 10.3 144 123-319 7-157 (266)
364 KOG4721 Serine/threonine prote 99.1 1.8E-11 4E-16 129.5 3.4 77 242-321 187-265 (904)
365 cd07831 STKc_MOK Catalytic dom 99.1 1.4E-10 3E-15 119.6 9.9 139 124-319 5-150 (282)
366 cd05576 STKc_RPK118_like Catal 99.1 1.4E-10 3.1E-15 116.7 9.5 78 239-319 57-136 (237)
367 cd07830 STKc_MAK_like Catalyti 99.1 1.3E-10 2.7E-15 120.1 9.2 79 239-320 70-151 (283)
368 KOG0664 Nemo-like MAPK-related 99.1 5.6E-10 1.2E-14 108.7 12.6 48 279-328 169-216 (449)
369 KOG0589 Serine/threonine prote 99.1 6.9E-11 1.5E-15 125.2 6.9 145 124-322 10-160 (426)
370 cd07865 STKc_CDK9 Catalytic do 99.1 1.7E-10 3.6E-15 120.7 9.8 142 124-320 18-171 (310)
371 cd05043 PTK_Ryk Pseudokinase d 99.1 2.3E-10 5.1E-15 118.0 10.7 138 124-319 12-168 (280)
372 cd05074 PTKc_Tyro3 Catalytic d 99.1 2.3E-10 4.9E-15 117.5 10.5 139 124-319 5-164 (273)
373 cd08530 STKc_CNK2-like Catalyt 99.1 2E-10 4.4E-15 116.4 9.9 140 124-320 6-155 (256)
374 cd08218 STKc_Nek1 Catalytic do 99.1 3.1E-10 6.7E-15 115.3 11.1 139 124-320 6-153 (256)
375 KOG3087 Serine/threonine prote 99.1 9.6E-10 2.1E-14 102.1 13.0 145 122-316 11-164 (229)
376 cd07851 STKc_p38 Catalytic dom 99.1 1.5E-10 3.2E-15 123.6 9.0 75 241-320 94-170 (343)
377 cd07849 STKc_ERK1_2_like Catal 99.1 2E-10 4.3E-15 122.2 9.7 74 241-319 82-157 (336)
378 cd06616 PKc_MKK4 Catalytic dom 99.1 3.9E-10 8.5E-15 116.8 11.5 137 124-318 10-158 (288)
379 cd05092 PTKc_TrkA Catalytic do 99.1 2.8E-10 6.1E-15 117.6 10.1 137 124-319 11-173 (280)
380 KOG0196 Tyrosine kinase, EPH ( 99.1 5.8E-11 1.3E-15 130.2 5.1 175 90-322 603-785 (996)
381 cd08528 STKc_Nek10 Catalytic d 99.1 2.7E-10 5.8E-15 116.8 9.8 81 239-321 81-167 (269)
382 PHA02882 putative serine/threo 99.1 2.1E-10 4.5E-15 119.6 9.1 72 243-319 103-177 (294)
383 cd05118 STKc_CMGC Catalytic do 99.1 2.8E-10 6.1E-15 117.3 9.8 141 124-322 5-152 (283)
384 KOG3653 Transforming growth fa 99.1 2.6E-10 5.7E-15 119.0 8.7 141 124-320 216-368 (534)
385 KOG0596 Dual specificity; seri 99.1 2.3E-10 5E-15 121.3 8.1 140 124-323 367-514 (677)
386 PHA03210 serine/threonine kina 99.1 1.6E-10 3.5E-15 129.6 7.4 79 239-320 235-319 (501)
387 KOG0668 Casein kinase II, alph 99.1 9.5E-11 2.1E-15 111.4 4.5 141 124-322 44-187 (338)
388 cd06618 PKc_MKK7 Catalytic dom 99.1 4E-10 8.8E-15 117.4 9.8 78 239-319 86-166 (296)
389 cd08225 STKc_Nek5 Catalytic do 99.1 2.5E-10 5.5E-15 115.8 8.1 141 124-320 6-154 (257)
390 cd07866 STKc_BUR1 Catalytic do 99.1 1.9E-10 4.1E-15 120.4 7.3 75 242-319 90-166 (311)
391 cd07857 STKc_MPK1 Catalytic do 99.1 4.5E-10 9.8E-15 119.2 10.1 76 241-320 80-157 (332)
392 cd08226 PK_STRAD_beta Pseudoki 99.1 5.6E-10 1.2E-14 118.3 10.7 76 239-316 71-149 (328)
393 KOG0670 U4/U6-associated splic 99.1 6.1E-10 1.3E-14 117.1 10.4 145 125-324 439-593 (752)
394 cd07854 STKc_MAPK4_6 Catalytic 99.1 3.1E-10 6.7E-15 121.0 8.4 74 242-319 91-166 (342)
395 cd07856 STKc_Sty1_Hog1 Catalyt 99.1 6.6E-10 1.4E-14 117.8 10.9 140 123-319 15-159 (328)
396 KOG0586 Serine/threonine prote 99.1 5.6E-10 1.2E-14 120.3 9.9 140 124-320 62-207 (596)
397 cd07838 STKc_CDK4_6_like Catal 99.1 1.2E-09 2.5E-14 112.9 12.2 142 124-320 5-159 (287)
398 cd07842 STKc_CDK8_like Catalyt 99.0 4E-10 8.6E-15 118.3 8.7 145 124-320 6-164 (316)
399 KOG1006 Mitogen-activated prot 99.0 1.4E-10 3.1E-15 112.6 4.6 140 124-321 70-221 (361)
400 cd07855 STKc_ERK5 Catalytic do 99.0 2.3E-10 5.1E-15 121.5 6.7 75 241-319 82-158 (334)
401 cd07834 STKc_MAPK Catalytic do 99.0 3.3E-10 7.3E-15 119.9 7.7 77 241-321 78-156 (330)
402 cd07829 STKc_CDK_like Catalyti 99.0 1.1E-09 2.4E-14 112.8 11.2 78 240-320 71-150 (282)
403 cd07852 STKc_MAPK15 Catalytic 99.0 7.7E-10 1.7E-14 117.6 10.2 139 124-320 13-159 (337)
404 KOG0984 Mitogen-activated prot 99.0 6.3E-10 1.4E-14 104.5 8.2 81 239-322 117-203 (282)
405 KOG4717 Serine/threonine prote 99.0 7.3E-10 1.6E-14 116.3 9.0 146 123-324 23-175 (864)
406 KOG0579 Ste20-like serine/thre 99.0 1.2E-10 2.5E-15 124.7 3.0 79 239-319 101-181 (1187)
407 smart00220 S_TKc Serine/Threon 99.0 6.3E-10 1.4E-14 111.2 8.3 79 240-321 60-140 (244)
408 KOG0669 Cyclin T-dependent kin 99.0 8.9E-11 1.9E-15 113.1 0.9 77 241-320 98-176 (376)
409 cd07858 STKc_TEY_MAPK_plant Ca 99.0 8.9E-10 1.9E-14 117.2 8.5 76 241-320 83-160 (337)
410 cd08216 PK_STRAD Pseudokinase 99.0 2.6E-09 5.6E-14 112.2 11.3 79 239-319 71-152 (314)
411 KOG4645 MAPKKK (MAP kinase kin 99.0 4.4E-10 9.5E-15 129.6 5.4 138 124-321 1241-1387(1509)
412 KOG0599 Phosphorylase kinase g 99.0 6.9E-10 1.5E-14 108.2 5.6 156 117-322 15-177 (411)
413 KOG1035 eIF-2alpha kinase GCN2 98.9 5.5E-10 1.2E-14 128.2 5.2 74 243-318 672-747 (1351)
414 PRK15123 lipopolysaccharide co 98.9 1.3E-08 2.8E-13 103.8 14.7 101 198-317 75-194 (268)
415 cd08222 STKc_Nek11 Catalytic d 98.9 1.1E-09 2.3E-14 111.7 6.6 77 239-318 74-155 (260)
416 cd05154 ACAD10_11_like Acyl-Co 98.9 6.2E-09 1.3E-13 103.4 11.2 145 123-321 3-210 (223)
417 KOG1151 Tousled-like protein k 98.9 4E-09 8.6E-14 109.0 9.2 92 231-323 527-628 (775)
418 KOG0696 Serine/threonine prote 98.9 9.3E-10 2E-14 112.7 4.2 141 124-317 355-499 (683)
419 KOG2052 Activin A type IB rece 98.9 7.3E-09 1.6E-13 107.6 9.9 143 124-321 217-369 (513)
420 KOG1027 Serine/threonine prote 98.9 2.8E-09 6.1E-14 118.3 6.5 138 122-321 513-664 (903)
421 KOG0603 Ribosomal protein S6 k 98.9 3.7E-09 8.1E-14 114.7 7.2 79 240-321 389-469 (612)
422 KOG0986 G protein-coupled rece 98.8 5.2E-09 1.1E-13 108.8 7.7 145 124-323 191-342 (591)
423 KOG0690 Serine/threonine prote 98.8 7.5E-09 1.6E-13 103.2 8.4 145 119-317 168-317 (516)
424 KOG0604 MAP kinase-activated p 98.8 2.6E-09 5.7E-14 105.6 4.1 141 121-319 65-215 (400)
425 KOG0576 Mitogen-activated prot 98.8 1.5E-09 3.3E-14 117.4 2.6 80 239-321 84-165 (829)
426 KOG0607 MAP kinase-interacting 98.8 1.4E-08 3.1E-13 101.2 8.9 139 122-317 82-228 (463)
427 KOG1025 Epidermal growth facto 98.8 3.5E-09 7.6E-14 116.9 5.0 142 124-325 702-855 (1177)
428 KOG2345 Serine/threonine prote 98.8 1.1E-08 2.4E-13 98.9 7.2 79 239-319 95-180 (302)
429 KOG1152 Signal transduction se 98.8 2.4E-08 5.1E-13 106.7 10.0 76 240-318 642-720 (772)
430 KOG0033 Ca2+/calmodulin-depend 98.8 5.8E-10 1.3E-14 107.2 -1.9 134 125-319 18-164 (355)
431 KOG0666 Cyclin C-dependent kin 98.8 6.9E-09 1.5E-13 103.1 5.3 79 241-320 102-188 (438)
432 KOG1026 Nerve growth factor re 98.8 7.4E-09 1.6E-13 115.9 6.0 137 124-318 492-653 (774)
433 KOG2268 Serine/threonine prote 98.8 1.1E-08 2.4E-13 103.0 6.5 181 124-351 98-279 (465)
434 KOG4257 Focal adhesion tyrosin 98.7 1.6E-08 3.4E-13 108.8 7.5 141 124-322 395-545 (974)
435 PRK10593 hypothetical protein; 98.7 1.3E-07 2.8E-12 98.5 13.2 93 100-255 2-101 (297)
436 PF06293 Kdo: Lipopolysacchari 98.7 4.4E-08 9.5E-13 96.5 9.0 103 198-319 58-172 (206)
437 KOG4279 Serine/threonine prote 98.7 5.4E-08 1.2E-12 105.8 8.9 75 243-318 648-726 (1226)
438 TIGR02172 Fb_sc_TIGR02172 Fibr 98.7 2.1E-07 4.6E-12 92.9 12.4 33 285-320 153-185 (226)
439 KOG1345 Serine/threonine kinas 98.7 9.7E-08 2.1E-12 93.5 9.3 77 240-319 95-174 (378)
440 PLN00113 leucine-rich repeat r 98.6 6.7E-08 1.4E-12 117.6 9.6 126 123-316 695-830 (968)
441 KOG0695 Serine/threonine prote 98.6 4.5E-08 9.8E-13 98.0 4.6 76 239-317 323-400 (593)
442 KOG0671 LAMMER dual specificit 98.5 3.7E-07 7.9E-12 93.6 9.9 166 124-351 95-287 (415)
443 COG2112 Predicted Ser/Thr prot 98.5 1.4E-06 3.1E-11 81.0 12.6 125 124-316 28-154 (201)
444 PRK09550 mtnK methylthioribose 98.5 4.7E-06 1E-10 89.5 17.5 110 95-253 5-117 (401)
445 PF01636 APH: Phosphotransfera 98.5 1.8E-06 3.8E-11 86.3 12.8 35 285-320 166-200 (239)
446 KOG0665 Jun-N-terminal kinase 98.4 6.3E-08 1.4E-12 96.9 1.5 76 240-321 94-171 (369)
447 KOG0614 cGMP-dependent protein 98.4 2.3E-07 4.9E-12 98.0 5.3 77 242-321 495-573 (732)
448 cd05150 APH Aminoglycoside 3'- 98.4 6E-06 1.3E-10 83.5 15.2 34 285-320 163-196 (244)
449 cd05155 APH_ChoK_like_1 Unchar 98.4 2.1E-06 4.6E-11 86.4 11.5 33 285-320 164-197 (235)
450 PRK05231 homoserine kinase; Pr 98.4 5E-06 1.1E-10 87.8 14.8 49 95-151 5-54 (319)
451 PF03881 Fructosamin_kin: Fruc 98.4 2.3E-06 5E-11 88.2 11.5 90 99-252 2-97 (288)
452 COG0515 SPS1 Serine/threonine 98.4 2E-06 4.2E-11 89.2 10.5 139 124-319 6-153 (384)
453 KOG4278 Protein tyrosine kinas 98.4 3.4E-07 7.3E-12 98.6 4.6 138 124-321 273-418 (1157)
454 PLN02756 S-methyl-5-thioribose 98.3 1.4E-05 3.1E-10 85.4 16.3 59 92-155 4-68 (418)
455 KOG0584 Serine/threonine prote 98.3 7.3E-07 1.6E-11 96.8 5.9 150 111-320 34-198 (632)
456 KOG0200 Fibroblast/platelet-de 98.3 2.1E-06 4.5E-11 98.4 9.9 138 125-319 303-469 (609)
457 cd05157 ETNK_euk Ethanolamine 98.3 8.4E-06 1.8E-10 81.9 13.0 77 123-256 3-81 (235)
458 PRK12396 5-methylribose kinase 98.2 7.2E-06 1.6E-10 87.1 11.7 51 285-338 227-279 (409)
459 TIGR02721 ycfN_thiK thiamine k 98.2 1.1E-05 2.4E-10 82.3 11.8 138 124-321 2-179 (256)
460 PRK09902 hypothetical protein; 98.1 4.4E-05 9.6E-10 74.2 12.2 146 120-318 20-180 (216)
461 cd05153 HomoserineK_II Homoser 98.0 4.7E-05 1E-09 79.4 12.6 32 285-318 175-206 (296)
462 PRK06148 hypothetical protein; 98.0 0.00016 3.5E-09 87.4 18.6 56 90-153 4-59 (1013)
463 PF14531 Kinase-like: Kinase-l 98.0 2.4E-05 5.1E-10 80.0 9.5 41 279-321 158-198 (288)
464 cd05152 MPH2' Macrolide 2'-Pho 98.0 0.00025 5.5E-09 73.0 16.2 36 285-322 185-221 (276)
465 PLN00181 protein SPA1-RELATED; 97.9 5.9E-06 1.3E-10 98.2 4.3 76 241-317 54-148 (793)
466 cd05156 ChoK_euk Choline Kinas 97.9 5.3E-05 1.1E-09 79.3 10.8 36 285-320 179-216 (302)
467 TIGR00938 thrB_alt homoserine 97.9 0.00025 5.3E-09 74.5 15.3 33 285-319 187-219 (307)
468 KOG1290 Serine/threonine prote 97.9 6.3E-05 1.4E-09 79.7 10.4 127 123-300 83-222 (590)
469 KOG2269 Serine/threonine prote 97.9 3E-05 6.5E-10 78.6 7.2 195 116-351 251-459 (531)
470 PLN02876 acyl-CoA dehydrogenas 97.8 0.00015 3.3E-09 86.2 13.9 107 96-256 17-133 (822)
471 COG2334 Putative homoserine ki 97.8 0.0001 2.2E-09 77.3 10.9 29 123-153 31-59 (331)
472 TIGR01767 MTRK 5-methylthiorib 97.8 0.00014 3E-09 76.5 10.7 50 285-337 192-243 (370)
473 PF10707 YrbL-PhoP_reg: PhoP r 97.7 0.00087 1.9E-08 65.2 14.7 156 123-319 6-174 (199)
474 COG3001 Uncharacterized protei 97.7 0.00066 1.4E-08 66.1 12.8 95 98-255 1-99 (286)
475 PRK06149 hypothetical protein; 97.6 0.00046 1E-08 83.4 13.4 59 87-154 7-65 (972)
476 PLN02236 choline kinase 97.6 0.00058 1.3E-08 72.7 12.5 161 101-320 18-234 (344)
477 PRK11768 serine/threonine prot 97.5 0.0015 3.3E-08 69.0 14.5 54 94-154 8-61 (325)
478 KOG4158 BRPK/PTEN-induced prot 97.2 0.00045 9.8E-09 71.7 5.3 72 242-316 318-393 (598)
479 COG3173 Predicted aminoglycosi 97.1 0.0064 1.4E-07 63.3 12.9 36 285-322 198-233 (321)
480 KOG1240 Protein kinase contain 97.1 0.00013 2.9E-09 84.3 -0.0 36 279-316 133-168 (1431)
481 PF04655 APH_6_hur: Aminoglyco 96.9 0.0033 7.1E-08 63.6 7.9 31 124-154 8-38 (253)
482 PLN02421 phosphotransferase, a 96.8 0.0069 1.5E-07 64.2 10.2 33 287-320 184-216 (330)
483 KOG0590 Checkpoint kinase and 96.7 0.0018 4E-08 73.7 5.0 70 246-319 400-471 (601)
484 PF01633 Choline_kinase: Choli 96.6 0.0078 1.7E-07 59.4 8.6 35 285-320 143-177 (211)
485 PTZ00384 choline kinase; Provi 96.1 0.063 1.4E-06 57.9 12.7 102 97-256 29-138 (383)
486 PRK10271 thiK thiamine kinase; 95.8 0.0081 1.7E-07 57.6 3.7 34 285-321 77-110 (188)
487 COG1686 DacC D-alanyl-D-alanin 95.7 0.0097 2.1E-07 63.9 4.2 66 504-582 47-120 (389)
488 PRK15442 beta-lactamase TEM; P 95.6 0.023 5E-07 58.6 6.2 64 525-588 56-126 (284)
489 PF07914 DUF1679: Protein of u 95.6 0.19 4.2E-06 54.7 13.6 45 287-333 270-317 (414)
490 KOG0603 Ribosomal protein S6 k 95.5 0.032 7E-07 61.7 7.0 83 239-324 69-153 (612)
491 PTZ00296 choline kinase; Provi 95.2 0.28 6.1E-06 54.0 13.4 114 84-255 70-194 (442)
492 PF12260 PIP49_C: Protein-kina 94.8 0.035 7.6E-07 53.7 4.4 85 232-319 21-113 (188)
493 PF13095 FTA2: Kinetochore Sim 94.7 0.29 6.3E-06 47.5 10.5 25 124-149 43-68 (207)
494 PRK10793 D-alanyl-D-alanine ca 94.6 0.034 7.3E-07 60.1 4.2 67 504-583 55-134 (403)
495 KOG1033 eIF-2alpha kinase PEK/ 94.2 0.0075 1.6E-07 65.2 -1.8 76 242-322 331-410 (516)
496 PF00768 Peptidase_S11: D-alan 94.1 0.065 1.4E-06 53.9 4.7 53 496-561 10-64 (240)
497 TIGR02906 spore_CotS spore coa 94.0 0.11 2.4E-06 54.3 6.6 30 285-317 187-216 (313)
498 smart00587 CHK ZnF_C4 abd HLH 94.0 0.043 9.2E-07 53.5 3.2 37 285-321 120-159 (196)
499 KOG3021 Predicted kinase [Gene 93.0 0.59 1.3E-05 45.4 8.8 27 285-313 210-236 (313)
500 PRK10001 D-alanyl-D-alanine ca 92.9 0.062 1.4E-06 58.0 2.6 67 504-583 48-127 (400)
No 1
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=1.8e-78 Score=658.48 Aligned_cols=384 Identities=32% Similarity=0.548 Sum_probs=343.3
Q ss_pred HHHHHHHHHHHHHHHhccchhHhHHHHHhcCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhCCChhccccccCcc
Q 005995 45 RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVET 124 (666)
Q Consensus 45 ~~~~~~a~~l~~~l~~lg~~~iK~gQ~ls~r~d~lp~~~~~~l~~l~d~~~~~~~~~~~~~l~~~~g~~~~~~f~~~~~~ 124 (666)
+..++.+++|+++|++|||+|||+||+||||+|++|++|+++|++|||+|||+|++++++++++++|.+++++|++|+++
T Consensus 52 ~~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~~ 131 (517)
T COG0661 52 ELREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEPE 131 (517)
T ss_pred HHhHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCCC
Confidence 45667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCC---CChHHHHHHHHHhchhhhcHHHH
Q 005995 125 PLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ---YDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~---~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
|+|+||+||||+|++++|++|||||||||+++.+..|+.+++.+++++....|. +++..+++|+.+.+..|+||++|
T Consensus 132 PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~E 211 (517)
T COG0661 132 PIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRRE 211 (517)
T ss_pred chhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHHH
Confidence 999999999999999999999999999999999999999999999999988776 89999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA 279 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l 279 (666)
|+|+++|+++|+ +.+.++||+||+ |+++||||||++|.++++...++..|.|.+.+++.++++|+
T Consensus 212 A~n~~~~~~nf~-------------~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~ 278 (517)
T COG0661 212 AANAERFRENFK-------------DDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFL 278 (517)
T ss_pred HHHHHHHHHHcC-------------CCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHH
Confidence 999999999987 467899999997 89999999999999999999999999999999999999999
Q ss_pred HHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCCccC-CCchH
Q 005995 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLR-LDVPE 358 (666)
Q Consensus 280 ~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~~~l~~a~~~~d~~~~~~~~~~~g~~~~-~~~~~ 358 (666)
+|++.+||||||||||||+|+ ++|+++++|||+++++++++|..++++++|+.++|++.+++.+.++|.... .+...
T Consensus 279 ~q~~~dgffHaDpHpGNi~v~--~~g~i~~lDfGi~g~l~~~~r~~l~~~~~a~~~rD~~~v~~~~~~~G~~~~~~~~~~ 356 (517)
T COG0661 279 RQLLRDGFFHADPHPGNILVR--SDGRIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVELGYVPPDTDRDP 356 (517)
T ss_pred HHHHhcCccccCCCccceEEe--cCCcEEEEcCcceecCCHHHHHHHHHHHHHHHhhCHHHHHHHHHHhCCCCCccchHH
Confidence 999999999999999999999 569999999999999999999999999999999999999999999999853 34444
Q ss_pred HHHHHHHHHhhcC-CChhhhHHHHhhhHHHHHHhHHHHHHHHHhhHHHhhhcCCCCCCcchhHHHHHHHHHHHHhHhccC
Q 005995 359 QAMEVSTLFFRTS-APANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMN 437 (666)
Q Consensus 359 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~l~g~~~~l~ 437 (666)
...++..++-... .+.. .++ +.+......+...+|+ +++|++++++.|++.++||++++||
T Consensus 357 ~~~~i~~~~~~~~~~~~~-------~~~---------~~~~~~~~~~~~~~~~--~r~p~~l~ll~r~~~~vEg~~~~ld 418 (517)
T COG0661 357 LAAAIRAVLEPIYGKPLE-------EIS---------FGEILDKLFEVARRFP--MRLPPELVLLQRTLLLVEGVGRQLD 418 (517)
T ss_pred HHHHHHHHHHhhhCCChh-------hcc---------HHHHHHHHHHHHHhcC--ccCCHHHHHHHHHHHHHHHHHHhhC
Confidence 4444444332211 1111 111 1111111112244444 7899999999999999999999999
Q ss_pred CchhHHHhHHHHHHHHHHhccCCC
Q 005995 438 VRIVYLDIMRPFAEYVLQVGINKE 461 (666)
Q Consensus 438 p~~~~~~~~~p~~~~~l~~~l~~~ 461 (666)
|++|++.++.||+.++..+++.++
T Consensus 419 p~~~~~~~a~p~~~~~~~~~~~~~ 442 (517)
T COG0661 419 PRFNLWAVAQPLLAKWLKKQLSPK 442 (517)
T ss_pred ccccHHHHhhHHHHHHHHHhhhHH
Confidence 999999999999999998887765
No 2
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=100.00 E-value=2.1e-74 Score=631.63 Aligned_cols=425 Identities=30% Similarity=0.420 Sum_probs=354.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhhhh-hhhhhhHHHHHH---HHHHHHHHHHHHHHHhccchhHhHHHHHhcCCCCCCH
Q 005995 6 IYRRRMSVFSMAILIYLDYKAVQQREK-WIKKSKISALWQ---RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPE 81 (666)
Q Consensus 6 ~~~R~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~a~~l~~~l~~lg~~~iK~gQ~ls~r~d~lp~ 81 (666)
.+.|..+++++++...+++...+.... +.....+...|. ......|+|++.+|++|||+|||+||+||||+|++|+
T Consensus 3 ~~~R~~~I~~v~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rlr~aLe~LGp~fIKlGQ~LStR~DllP~ 82 (537)
T PRK04750 3 ELFRLYKIIRVFLRYGLDELILSHRLTRPLRLWRRSLFWMPNRHKDKPRGERLRLALEELGPIFVKFGQMLSTRRDLFPP 82 (537)
T ss_pred hhHHHHHHHHHHHHhChHHHhhhccccchhhhhhhhhhhhhcccccccHHHHHHHHHHHcCcHHHHHHHHHHcCcccCCH
Confidence 356888888888777666543322111 111001100111 1123568999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHHHhCCChhccccccCccccccceeeeeEEEEecC-CCEEEEEeeCCChHHHHHH
Q 005995 82 PYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVD-GRQVVVKVQHQGIKTIILE 160 (666)
Q Consensus 82 ~~~~~l~~l~d~~~~~~~~~~~~~l~~~~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~~-g~~VAVKv~~p~~~~~~~~ 160 (666)
+|+++|++|||+|||+|++++++++++++|.+++++|.+||++|+||||+||||+|++++ |++|||||+||++.+.+..
T Consensus 83 ~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~ 162 (537)
T PRK04750 83 DIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDA 162 (537)
T ss_pred HHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999987 9999999999999999999
Q ss_pred HHHHHHHHHHHHHhhCC---CCChHHHHHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee
Q 005995 161 DLKNAKSIVDWIAWAEP---QYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI 237 (666)
Q Consensus 161 dl~~l~~l~~~~~~~~~---~~~~~~~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~ 237 (666)
|+++++.++.++.+..| .+++.++++|+.+.+.+|+||.+|++|+.+++++|. +.+.++||++|
T Consensus 163 Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~-------------~~~~v~VP~v~ 229 (537)
T PRK04750 163 DLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFE-------------DSDMLYVPEVY 229 (537)
T ss_pred HHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHcc-------------CCCCeecceee
Confidence 99999999999987654 467899999999999999999999999999999886 34579999999
Q ss_pred e--cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHHHHhhhcCccccCCCcCceEEeeCC--CCceEEEecc
Q 005995 238 Q--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFG 313 (666)
Q Consensus 238 ~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~--~~~i~liDFG 313 (666)
+ |+++||||||++|++++++..+...+.+++.+++.+++.++.|++.+||||||||||||+|+.++ +++++++|||
T Consensus 230 ~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFG 309 (537)
T PRK04750 230 WDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFG 309 (537)
T ss_pred cccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecc
Confidence 7 99999999999999999987777888999999999999999999999999999999999998431 1389999999
Q ss_pred cccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCCccC-CCchHHHHHHHHH---HhhcCCChhhhHHHHhhhHHHHH
Q 005995 314 LTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLR-LDVPEQAMEVSTL---FFRTSAPANEAFETVKNLSEQRA 389 (666)
Q Consensus 314 ~~~~l~~~~~~~~~~l~~a~~~~d~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 389 (666)
+++.++++.|..+++++.|+.++|+..+++.+.++|.... .+..++..++..+ ++.. |.. +++.
T Consensus 310 ivg~l~~~~r~~l~~~~~a~~~~D~~~v~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~--~l~-------~i~~--- 377 (537)
T PRK04750 310 IVGSLNKEDKRYLAENFLAFFNRDYRRVAELHVESGWVPPDTRVEELEFAIRAVCEPIFDK--PLA-------EISF--- 377 (537)
T ss_pred eEEECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHhCC--Ccc-------cccH---
Confidence 9999999999999999999999999999999999998743 3444444444433 3322 111 1111
Q ss_pred HhHHHHHHHHHhhHHHhhhcCCCCCCcchhHHHHHHHHHHHHhHhccCCchhHHHhHHHHHHHHHHhccCCCCC
Q 005995 390 KNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPS 463 (666)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~l~g~~~~l~p~~~~~~~~~p~~~~~l~~~l~~~~~ 463 (666)
...+.+.+. ..++|+ +++|++++++.|++.++||++++|||++|++++++||+++++.++++++..
T Consensus 378 --~~~l~~l~~----~~r~~~--~~ip~~l~ll~ktl~~lEG~~r~LdP~~d~~~~a~p~l~~~~~~~~~~~~~ 443 (537)
T PRK04750 378 --GHVLLRLFN----TARRFN--VEIQPQLVLLQKTLLNVEGLGRQLDPQLDLWKTAKPFLERWMKEQVGPRAL 443 (537)
T ss_pred --HHHHHHHHH----HHHHCC--CcccHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcChHHH
Confidence 112222222 245555 789999999999999999999999999999999999999999999886543
No 3
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=100.00 E-value=6.7e-71 Score=599.47 Aligned_cols=382 Identities=29% Similarity=0.483 Sum_probs=334.1
Q ss_pred HHHHHHHHHHHHhccchhHhHHHHHhcCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhCCChhccccccCccccc
Q 005995 48 ERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLA 127 (666)
Q Consensus 48 ~~~a~~l~~~l~~lg~~~iK~gQ~ls~r~d~lp~~~~~~l~~l~d~~~~~~~~~~~~~l~~~~g~~~~~~f~~~~~~pi~ 127 (666)
...|++++++|++|||+|||+||+||||+|++|++|+++|++|||++||+|++++++++++++|.+++++|.+||++|||
T Consensus 47 ~~~~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~pla 126 (437)
T TIGR01982 47 MSRGERLRLALEELGPTFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLA 126 (437)
T ss_pred ccHHHHHHHHHHHcCchhHHHhHHHHhCcccCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCccee
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCC---CCChHHHHHHHHHhchhhhcHHHHHHH
Q 005995 128 TASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEP---QYDFNPIIDEWCKEAPKELDFNSEAEN 204 (666)
Q Consensus 128 sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~---~~~~~~~~~e~~~~~~~Eld~~~Ea~n 204 (666)
+||+||||+|++++|++||||||||++.+.+..|+++++.++.++.+..+ .+++..+++++...+.+|+||.+||+|
T Consensus 127 saSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n 206 (437)
T TIGR01982 127 AASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAAN 206 (437)
T ss_pred eeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHH
Confidence 99999999999999999999999999999999999999999998887654 467899999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHHHHh
Q 005995 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI 282 (666)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l~~i 282 (666)
+.+++++++ +.+.++||++|+ |++++|||||++|.++.+.......+.+...++..+++.++.|+
T Consensus 207 ~~~~~~~~~-------------~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql 273 (437)
T TIGR01982 207 ASELGENFK-------------NDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQV 273 (437)
T ss_pred HHHHHHhcC-------------CCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 999999876 456899999997 89999999999999999987666666788889999999999999
Q ss_pred hhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCCcc-CCCchHHHH
Q 005995 283 YVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL-RLDVPEQAM 361 (666)
Q Consensus 283 ~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~~~l~~a~~~~d~~~~~~~~~~~g~~~-~~~~~~~~~ 361 (666)
|.+|+||+|||||||+++ ++|+++++|||+++.++++.+..+.+++.|+..+|+..+.+.+.++|+.. +.|......
T Consensus 274 ~~~g~~H~D~hPgNilv~--~~g~i~liDfG~~~~l~~~~r~~l~~l~~a~~~~D~~~l~~~l~~~g~~~~~~d~~~~~~ 351 (437)
T TIGR01982 274 LRDGFFHADLHPGNIFVL--KDGKIIALDFGIVGRLSEEDRRYLAEILYGFLNRDYRRVAEVHFDAGYVPSDTDMAEFEQ 351 (437)
T ss_pred HhCCceeCCCCcccEEEC--CCCcEEEEeCCCeeECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCHHHHHH
Confidence 999999999999999998 45899999999999999999999999999999999999999999999874 345555555
Q ss_pred HHHHHHhhcC-CChhhhHHHHhhhHHHHHHhHHHHHHHHHhhHHHhhhcCCCCCCcchhHHHHHHHHHHHHhHhccCCch
Q 005995 362 EVSTLFFRTS-APANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRI 440 (666)
Q Consensus 362 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~l~g~~~~l~p~~ 440 (666)
++..++.... .+. .+++ ....+.+.++. ..+++ +++|++++++.|++.++||++++|||++
T Consensus 352 ~~~~~~~~~~~~~~-------~~~~-----~~~~~~~~~~~----~~~~~--~~~p~~~~~l~r~l~~leg~~~~L~p~~ 413 (437)
T TIGR01982 352 AIRAIGEPIFGQPL-------KEIS-----VGRLLAGLFKI----TRDFN--MELQPQLLLLQKTLLTVEGVGRQLDPDL 413 (437)
T ss_pred HHHHHHHHHhCCCh-------hhCC-----HHHHHHHHHHH----HHHCC--ccCCHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 5544332111 111 1111 11222222222 33444 6899999999999999999999999999
Q ss_pred hHHHhHHHHHHHHHHhccCCCC
Q 005995 441 VYLDIMRPFAEYVLQVGINKEP 462 (666)
Q Consensus 441 ~~~~~~~p~~~~~l~~~l~~~~ 462 (666)
|+.++++||+.+.+.++++++.
T Consensus 414 ~~~~~~~p~~~~~~~~~~~~~~ 435 (437)
T TIGR01982 414 NMWKVAEPFVKRWIRKRLGPKA 435 (437)
T ss_pred CHHHHHHHHHHHHHHhhcChhc
Confidence 9999999999999988887653
No 4
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=9.3e-71 Score=594.16 Aligned_cols=403 Identities=32% Similarity=0.517 Sum_probs=338.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccchhHhHHHHHhcCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhCCChh
Q 005995 36 KSKISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMG 115 (666)
Q Consensus 36 ~~~~~~~~~~~~~~~a~~l~~~l~~lg~~~iK~gQ~ls~r~d~lp~~~~~~l~~l~d~~~~~~~~~~~~~l~~~~g~~~~ 115 (666)
.+.+.+.....|.+.|++|+++++.|||+|||+||.+|||+|++|+||.++|+.|||++||.|++++.+++++|+|.+++
T Consensus 79 ~e~~~~~~~~~~~~~a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~~ie 158 (538)
T KOG1235|consen 79 SESRLSKLSKVLLSAAERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGAPIE 158 (538)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHH
Confidence 34555566777888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCccccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhh
Q 005995 116 GMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (666)
Q Consensus 116 ~~f~~~~~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 195 (666)
++|++||++|||+||+||||+|++++|+.||||||||++++.+..|+.+++.++..+.+..|.+++..+++|+.+.+..|
T Consensus 159 ~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~E 238 (538)
T KOG1235|consen 159 DIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQE 238 (538)
T ss_pred HHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHH
Q 005995 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (666)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~ 273 (666)
+||.+||+|.++++++|++.++ ...++||+||+ |+++|||||||+|.+++|+..+++.++++.+++..
T Consensus 239 LDF~~EA~Nae~~~~~f~~~~~----------~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~ 308 (538)
T KOG1235|consen 239 LDFTKEAKNAERFRENFKDFSL----------LTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNK 308 (538)
T ss_pred cchHHHHHhHHHHHHHHHhccc----------ccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHH
Confidence 9999999999999999985431 12599999998 88999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCccccCCCcCceEEeeC--CCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCCc
Q 005995 274 ITRAYAHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (666)
Q Consensus 274 l~~~~l~~i~~~g~~H~D~hPgNilv~~~--~~~~i~liDFG~~~~l~~~~~~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (666)
+.+++++||+.+||||||||||||+|+++ ++++++++|||+++.+++..|..++++|+|+...|...+......+|..
T Consensus 309 l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~~r~~~~~~~~a~~~~d~~~~~~~~~~~g~~ 388 (538)
T KOG1235|consen 309 LVEAYLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHKTRKDYAELWLALVFEDEKAMQALAEQLGLG 388 (538)
T ss_pred HHHHHHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHHHHHHHHHHHHHHhcccHHHHHHHHHHhccc
Confidence 99999999999999999999999999954 3678999999999999999999999999999999999999999999987
Q ss_pred cCCCchHHHHHHHHHHhhcCCChhhhHHHHhhhHHHHHHhHHHHHHHHHhhHHHhhhcCCCCCCcchhHHHHHHHHHHHH
Q 005995 352 LRLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRG 431 (666)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~l~g 431 (666)
.+.+.+.++.++.....+...+..... ..+........+.+.....+....+.+ .++|..+.++.|+...+++
T Consensus 389 ~d~~~~~fa~~l~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L------~~~p~~i~li~k~~~l~r~ 461 (538)
T KOG1235|consen 389 LDDLYPLFATALTGRPWDSVIGAGITK-YLKGLEEDADENQKIASAKFPGISQLL------RRMPREILLILKTNDLLRG 461 (538)
T ss_pred cchhhhhhHHHHhCCchhhccccchhh-hhhhhhhhhhhHHHHHHHHhhHHHHHH------HhchHhhhhhcccHHHHHh
Confidence 644555555554433322211100000 011111111111122122221111112 4579999999999999999
Q ss_pred hHhccCCchhHHHhHHHHHHHHHH
Q 005995 432 LSSTMNVRIVYLDIMRPFAEYVLQ 455 (666)
Q Consensus 432 ~~~~l~p~~~~~~~~~p~~~~~l~ 455 (666)
+...++...+....+..+++.+++
T Consensus 462 ~~~~l~~~~~~~~~f~~~~~~~~~ 485 (538)
T KOG1235|consen 462 LSSNLGIPSSLERSFLEMARLCLR 485 (538)
T ss_pred HHHHhccccccchHHHHHHHHHHH
Confidence 999999888765455555555554
No 5
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-47 Score=387.50 Aligned_cols=373 Identities=20% Similarity=0.299 Sum_probs=305.0
Q ss_pred HHHHHHHHhccchhHhHHHHHhcCCCCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhCC-ChhccccccCccccccce
Q 005995 52 KRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGE-SMGGMFMDFVETPLATAS 130 (666)
Q Consensus 52 ~~l~~~l~~lg~~~iK~gQ~ls~r~d~lp~~~~~~l~~l~d~~~~~~~~~~~~~l~~~~g~-~~~~~f~~~~~~pi~sgs 130 (666)
+-|+.+++..||+|||+|||.|||+|+||+++|..|++|+.+|+|++|...++.+.+++|. .++++|.+|++.|||+||
T Consensus 122 ~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PIGsG~ 201 (565)
T KOG1236|consen 122 RLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFGVKKIEEIFSEFNREPIGSGC 201 (565)
T ss_pred HHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCchHHHHHHHHHHHCcCcHHHHHHhcCCcccccch
Confidence 5789999999999999999999999999999999999999999999999999999999997 999999999999999999
Q ss_pred eeeeEEEEec-------C---------CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCC--CCChHHHHHHHHHhc
Q 005995 131 IAQVHRATLV-------D---------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEP--QYDFNPIIDEWCKEA 192 (666)
Q Consensus 131 ~gqV~~a~l~-------~---------g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~--~~~~~~~~~e~~~~~ 192 (666)
|||||+|+++ + .+.|||||.+|+++++++.|+.+++..++.+.+... -+++...++.|.-.+
T Consensus 202 IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~l~wL~l~~~vkqF~v~l 281 (565)
T KOG1236|consen 202 IAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNVPDLSWLSLPLEVKQFSVGL 281 (565)
T ss_pred hhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhcCccccccCcchHHHHHHHH
Confidence 9999999863 1 257999999999999999999999988888775432 246778899999999
Q ss_pred hhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--cCCCeeEeeecCCccCCChhhHHHcCC-CHHH
Q 005995 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGV-NKQK 269 (666)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~-~~~~ 269 (666)
..++|+++||.|+.+|..+|. +...+.+|+++. .++.||+-+|.+|.++....+.....- -.++
T Consensus 282 n~QvdL~~EA~hL~rF~~NF~-------------~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~v~~~v~~~~~pe~l~kk 348 (565)
T KOG1236|consen 282 NAQVDLRQEALHLPRFTNNFS-------------GSKKVLFPKPIAPLHTDLVLVETYERGLSVLRFVKWKSQPEALVKK 348 (565)
T ss_pred HhhcchhhhhhhhHHHHHhcc-------------cceeecCCcccccccccceeeeeccccccHHhhhhcccChHHHHHH
Confidence 999999999999999999986 335688899886 889999999999999987754322110 1356
Q ss_pred HHHHHHHHHHHHhhhcCccccCCCcCceEEeeCCC-----------------------------------------CceE
Q 005995 270 VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPP-----------------------------------------HRPI 308 (666)
Q Consensus 270 ~~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~-----------------------------------------~~i~ 308 (666)
++...++++++|++.++|+|+|+|||||++...++ .+++
T Consensus 349 va~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~~~i~~~L~~~~~e~~d~~~~~~~~~~~~P~lv 428 (565)
T KOG1236|consen 349 VAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKAEKASAIKRGLEWFRSEVRDARFTDSPDLEYEPTLV 428 (565)
T ss_pred HHHHHHHHHHHHHHhhcceecccCCCcEEEEecCCCccccccccchhhhHHhhhhhhhhhhhhhhhhhccccccCCCeEE
Confidence 78888889999999999999999999999986433 4689
Q ss_pred EEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCCccC-CCchHHHHHHHHHHhhcCCChhhhHHHHhhhHHH
Q 005995 309 LLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLR-LDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQ 387 (666)
Q Consensus 309 liDFG~~~~l~~~~~~~~~~l~~a~~~~d~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (666)
++|-|++..+++..+.++..++.|+++.|.-.+.+.+.+...... .|-..++..+...+...... ..++.++
T Consensus 429 flDtGiv~kLs~qn~~N~l~lF~av~~~~Gy~ag~lml~~Sr~q~~~d~e~F~~kvEklv~~~~st-----~sl~tl~-- 501 (565)
T KOG1236|consen 429 FLDTGIVTKLSHQNQMNLLSLFRAVARFDGYDAGELMLERSRQQQCIDPERFARKVEKLVLKARST-----KSLRTLN-- 501 (565)
T ss_pred EecchhhhccChhhHHHHHHHHHHHHHhcchhHHHHHHhhcccccCCCHHHHHHHHHHHHHHhhhh-----cccCcCc--
Confidence 999999999999999999999999999999888888888776532 34444565565554322100 0111221
Q ss_pred HHHhHHHHHHHHHhhHHHhhhcCCCCCCcchhHHHHHHHHHHHHhHhccCCchhHHHhHHHHHHHH
Q 005995 388 RAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYV 453 (666)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~l~g~~~~l~p~~~~~~~~~p~~~~~ 453 (666)
....+++++.. ++.++ +++-++++-++=++.+|||.+++|||+.|+.....+|+...
T Consensus 502 ---i~~ll~em~tm----vreH~--V~ids~f~tvvlsilvlEG~gRqLdP~lDl~~~~~~~l~~~ 558 (565)
T KOG1236|consen 502 ---IGDLLSEMFTM----VREHH--VRIDSNFTTVVLSILVLEGFGRQLDPDLDLFQLRTFLLNVA 558 (565)
T ss_pred ---HHHHHHHHHHH----HHHhh--eeeccchHHHHHHHHHHhhhccccCCCcchhhhHHHHHHHH
Confidence 22344555544 33333 68999999999999999999999999999999555554443
No 6
>KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only]
Probab=100.00 E-value=1.8e-38 Score=305.77 Aligned_cols=351 Identities=22% Similarity=0.311 Sum_probs=286.1
Q ss_pred HhcCC-CCCCHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhCCChhccccccCccccccceeeeeEEEEecCCCEEEEEee
Q 005995 72 LSTRA-DVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQ 150 (666)
Q Consensus 72 ls~r~-d~lp~~~~~~l~~l~d~~~~~~~~~~~~~l~~~~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~~g~~VAVKv~ 150 (666)
||.+. .++|+...+.|+..++.+..||..++.+++..++|.+|.+.|++||+.|.+++|+||||+|++++|..||||||
T Consensus 2 LSiQD~~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~~g~eVavKiQ 81 (363)
T KOG1234|consen 2 LSIQDGSLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLADGPEVAVKIQ 81 (363)
T ss_pred cccccCCccCHHHHHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhcCCCeeeeecC
Confidence 44443 57899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcc
Q 005995 151 HQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD 230 (666)
Q Consensus 151 ~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (666)
+||+.+.+..|+.++..++..-..+..++-+...++..++.+..|+||.+||....+|+..+. +.++
T Consensus 82 YPGva~sI~SD~~nl~~lLn~s~llPkGLFLd~~i~~ArkEL~~ECDYqrEA~~~~kFr~LLs-------------~~p~ 148 (363)
T KOG1234|consen 82 YPGVARSIDSDANNLSRLLNFSGLLPKGLFLDVLIEVARKELKWECDYQREAASALKFRPLLS-------------DDPN 148 (363)
T ss_pred CCchhhhccCcHHHHHHHHhhcccccccccHHHHHHHHHHhcccccchHHHHHHHhhhHHHhc-------------CCCC
Confidence 999999999999999988887666666777888999999999999999999999999999775 5678
Q ss_pred eeeeeeee--cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHHHHhhhcCccccCCCcCceEEeeCCCCceE
Q 005995 231 VLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPI 308 (666)
Q Consensus 231 ~~vP~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~ 308 (666)
++||.|+. |+.++|+||++.|.++.....+.+ ..++.+...++..+++.|++..|+..||+-+|+|.+.. ..+|.
T Consensus 149 f~VP~Vv~Elct~rvlt~el~~G~pid~~~~~sQ--~~rn~i~~~~l~lcLrEif~f~fMQTDPNWsNFly~~~-tk~i~ 225 (363)
T KOG1234|consen 149 FYVPRVVDELCTVRVLTLELGQGLPIDKTAKLSQ--ETRNYIGYKLLELCLREIFEFRFMQTDPNWSNFLYNGR-TKKIE 225 (363)
T ss_pred cchhHHHHhhccchhhhhhhhcCccchhhhcccH--HHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHhccCCC-cceEE
Confidence 99999996 999999999999999987644322 34678999999999999999999999999999999864 57899
Q ss_pred EEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCCccCCCchHHHHH-HHHHHhhcCCChhhhHHHHhhhHHH
Q 005995 309 LLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQAME-VSTLFFRTSAPANEAFETVKNLSEQ 387 (666)
Q Consensus 309 liDFG~~~~l~~~~~~~~~~l~~a~~~~d~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (666)
|+|||.++.+++++...|++++.|+..+|.+.+.+.-.++|+.+.........+ +..++. -..|.... ..+.+.
T Consensus 226 LlDFGAsr~y~~~F~d~Y~~~~~aaa~~dr~~v~e~S~~lgfLtg~Es~~m~DAHv~sv~i-lgepfa~~----~pydF~ 300 (363)
T KOG1234|consen 226 LLDFGASREYGEKFIDKYIRLLKAAADRDREGVIEMSRELGFLTGYESKVMEDAHVESVMI-LGEPFASD----GPYDFG 300 (363)
T ss_pred EEeccccccccHHHHHHHHHHHHHHHhcchHHHHHHHHHhcccccchHHHHHHHhhhHhhh-ccccccCC----CCcCcC
Confidence 999999999999999999999999999999999999999999754332222211 111111 01111000 011111
Q ss_pred HHHhHHHHHHHHHhhHHHhhhcCCCCCCcchhHHHHHHHHHHHHhHhccCCchhHHHhHHH
Q 005995 388 RAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRP 448 (666)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~l~g~~~~l~p~~~~~~~~~p 448 (666)
.......++..+.. +.+++ +...|.|..-+.|.+....=+|..|++.+...+....
T Consensus 301 ~q~~t~ri~~lipv----mL~hR-L~pPPeEtYsLHRklsG~fL~cakl~A~v~C~~lf~e 356 (363)
T KOG1234|consen 301 DQTVTDRIQNLIPV----MLRHR-LCPPPEETYSLHRKLSGAFLLCAKLGATVPCRDLFKE 356 (363)
T ss_pred ccHHHHHHHhhhHH----HHhcc-CCCCcHHHHHHHHHhhhHHHHHHHhcCCCcHHHHHHH
Confidence 11122233333332 33333 2457888899999999999999999999998877654
No 7
>PRK10662 beta-lactam binding protein AmpH; Provisional
Probab=100.00 E-value=3.7e-34 Score=306.78 Aligned_cols=193 Identities=20% Similarity=0.279 Sum_probs=168.0
Q ss_pred CCCCchHHHHHHHHHHHhccCCCccceEEEEEECCeEEEEeeeeccCCCCCCCCCCCCceeecCCcHHHHHHHHHHHHHc
Q 005995 472 KPIHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDN 551 (666)
Q Consensus 472 ~p~~~~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SvsK~~ta~~i~~lve~ 551 (666)
.|...++++.++++++..++++++||++++|+++|++++ .+||+++...+.|++++|+|+|||+||+||++++++|+|+
T Consensus 25 ~~~~~~~~~~id~~~~~~~~~~~~pG~~v~V~~~g~i~~-~~~G~~~~~~~~~~t~dT~f~iaSiTK~fta~ai~~Lve~ 103 (378)
T PRK10662 25 AADPLLASDIVDRYAEHIFYGSGATGMALVVIDGNQRVF-RSYGETRPGNNVRPQLDSLIRIASITKLMTSEVLVKLADD 103 (378)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEECCEEEE-EeeeeccCCCCCCCCCCCeEEeeeecHHHHHHHHHHHHHC
Confidence 344568889999999999999999999999999999888 7899999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccccCcc---CCCCcccHHHHhcCcCCCCCCCCCCcCCCCCCC-CCHHHHHHHHhccCCCCCCCCceec
Q 005995 552 GKLKLEENIANIWPEFKS---NGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLI-CDWDECLNRIALSAPETEPGQEQLY 627 (666)
Q Consensus 552 G~l~ldd~v~~ylp~~~~---~~~~~iTi~~LLthtSGl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~pg~~~~Y 627 (666)
|+|+|||||.+|+|++.. ...++|||+|||+||||++.+........+... .+.++.++.+...++.++||+.|.|
T Consensus 104 G~l~lddpv~~ylP~~~~~~~~~~~~ITir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PGt~~~Y 183 (378)
T PRK10662 104 GTVKLTDPLSKYAPPGARVPTYNGQPITLLNLATHTSALPREQPGGAAHRPVFVWPTREQRWKWLSTAKLKAAPGTQAAY 183 (378)
T ss_pred CCCCCCCcHHHhCcccccCCCCCCCCccHHHHhhCcCCCCCCCCCccccCCcccCCCHHHHHHHHhcCCCcCCCCCceee
Confidence 999999999999997532 223689999999999999976433211112111 2567788888888899999999999
Q ss_pred ccCcHHHHHHHHHHHHhCCCHHHHHHHhcccccCCCCCC
Q 005995 628 HYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDALQ 666 (666)
Q Consensus 628 s~~~~~~ll~~iie~vtg~~~~~~l~~~i~~PLgm~~t~ 666 (666)
||.+|. +||.|||+++|++|.+|++++||+||||++|+
T Consensus 184 sn~~~~-lLg~iie~vtg~~~~~~l~~~I~~PLGM~~T~ 221 (378)
T PRK10662 184 SNLAFD-LLADALAKAAGKPYTQLLREKITRPLGMKDTT 221 (378)
T ss_pred cchhHH-HHHHHHHHHhCCCHHHHHHHhCccccCCCCCc
Confidence 999999 99999999999999999999999999999984
No 8
>PRK11289 ampC beta-lactamase/D-alanine carboxypeptidase; Provisional
Probab=100.00 E-value=2.4e-34 Score=307.96 Aligned_cols=183 Identities=25% Similarity=0.364 Sum_probs=166.3
Q ss_pred CchHHHHHHHHHHHhccCCCccceEEEEEECCeEEEEeeeeccCCCCCCCCCCCCceeecCCcHHHHHHHHHHHHHcCCC
Q 005995 475 HSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKL 554 (666)
Q Consensus 475 ~~~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SvsK~~ta~~i~~lve~G~l 554 (666)
..++++.+++.+++.++++.+||++++|+++|++++ .+||+++...+.|++++|+|+|||+||+||++++++|+|+|+|
T Consensus 28 ~~~~~~~vd~~i~~~~~~~~~pG~~vaV~~~g~~~~-~~~G~~~~~~~~p~~~dT~f~iaSvTK~fTa~~i~~Lve~G~L 106 (384)
T PRK11289 28 PQQLKDIVDRTITPLMEEQDIPGMAVAVIYNGKPYY-FNYGVADKATGQPVTQDTLFELGSVSKTFTATLAGYAQARGEL 106 (384)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEE-EeeeecccccCCCCCCCCEEeeeechHHHHHHHHHHHHHCCCC
Confidence 347888999999999999999999999999999887 5899999999999999999999999999999999999999999
Q ss_pred CCCCccccccccCccCCCCcccHHHHhcCcCC-CCCCCCCCcCCCCCCCCCHHHHHHHHhccCCCCCCCCceecccCcHH
Q 005995 555 KLEENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFG 633 (666)
Q Consensus 555 ~ldd~v~~ylp~~~~~~~~~iTi~~LLthtSG-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~Ys~~~~~ 633 (666)
+|||||.+|+|+|....+++|||+|||+|||| ++...+ ....+.+++++.+...++.++||+.|.|||.+|.
T Consensus 107 ~Lddpv~~ylP~~~~~~~~~ITir~LLtHtSGg~p~~~~-------~~~~~~~~l~~~l~~~~~~~~PG~~~~YSn~~y~ 179 (384)
T PRK11289 107 SLSDPASKYLPELKGSPFDGITLLHLATYTAGGLPLQVP-------DEVKDDAQLLRYFQAWQPAYAPGTQRLYSNPSIG 179 (384)
T ss_pred CCCCcHHHhCcccCCCCcCCeEHHHHhccccCCCcccCC-------cccCCHHHHHHHHHhCCCCCCCCCCeeechHHHH
Confidence 99999999999998766789999999999995 764322 1234678888888888899999999999999998
Q ss_pred HHHHHHHHHHhCCCHHHHHHHhcccccCCCCCC
Q 005995 634 WLCGGIIERASGKKFQEILEEGIIQPLSIDALQ 666 (666)
Q Consensus 634 ~ll~~iie~vtg~~~~~~l~~~i~~PLgm~~t~ 666 (666)
+||.|||+++|++|++|++++||+||||++|.
T Consensus 180 -lLg~iiE~vtg~~~~~~l~~~I~~PLGM~~T~ 211 (384)
T PRK11289 180 -LFGYLAAKAMGQPFEQLMEQRLFPPLGLTHTY 211 (384)
T ss_pred -HHHHHHHHHHCcCHHHHHHHhhhhhcCCCccc
Confidence 99999999999999999999999999999984
No 9
>PRK03642 putative periplasmic esterase; Provisional
Probab=100.00 E-value=2.6e-32 Score=297.61 Aligned_cols=188 Identities=22% Similarity=0.390 Sum_probs=159.0
Q ss_pred hHHHHHHHHHHHhccCCCccceEEEEEECCeEEEEeeeeccCCC-------CCCCCCCCCceeecCCcHHHHH-HHHHHH
Q 005995 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRY-------DPRPVQPDSLFPVFSVTKGITA-GMLHWL 548 (666)
Q Consensus 477 ~l~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~-------~~~~~~~~t~f~i~SvsK~~ta-~~i~~l 548 (666)
.-.+.+++.+++.++. ++||++++|+++|+++++.+||+++.. .+.|++++|+|+|||+||+||+ +++++|
T Consensus 38 ~~~~~ld~~i~~~~~~-~~pG~sv~V~~~g~iv~~~~~G~~~~~~g~~~~~~~~~~t~dT~f~iaSiTK~ftt~~ai~~L 116 (432)
T PRK03642 38 EKLNQMDRWISQQIDA-GYPGVNLLIIKDNQIVYRKAWGYAKKYDGSTLLAHPVKATTNTMYDLASNTKMYATNFALQKL 116 (432)
T ss_pred HHHHHHHHHHHHHHhc-CCCeEEEEEEECCEEEEEeeeeeccccccccccccCCCCCCCCEEechhhhHHHHHHHHHHHH
Confidence 3456788888887764 589999999999999999999998853 3468999999999999999975 788999
Q ss_pred HHcCCCCCCCccccccccCccC------CCCcccHHHHhcCcCCCCCCCCCCcCC--CCCCCCCHHHHHHHHhccCCCCC
Q 005995 549 VDNGKLKLEENIANIWPEFKSN------GKDLIKVHHVLNHTSGLHNVSVDLSSE--NPLLICDWDECLNRIALSAPETE 620 (666)
Q Consensus 549 ve~G~l~ldd~v~~ylp~~~~~------~~~~iTi~~LLthtSGl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 620 (666)
+|+|+|+|||||.+|+|+|... ++++|||+|||+||||++......... ......+.+++++.+...++.++
T Consensus 117 ve~G~l~ldd~v~~ylP~~~~~~~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 196 (432)
T PRK03642 117 VSEGKLDVNDLISKYIPGFKDSPGDKIKGKNTLRIIDLLHHSAGFPADPQYPNKAVAGALYSQDKSTTLEMIKKTPLEYQ 196 (432)
T ss_pred HHCCCCCCcCcHHHhcccccccccccccCCCCCcHHHHhhCccCCCCCcccccccccccccccCHHHHHHHHhhCCCcCC
Confidence 9999999999999999999753 246899999999999998754211111 11112355778888888899999
Q ss_pred CCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHhcccccCCCCCC
Q 005995 621 PGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDALQ 666 (666)
Q Consensus 621 pg~~~~Ys~~~~~~ll~~iie~vtg~~~~~~l~~~i~~PLgm~~t~ 666 (666)
||+.|.|||.+|. +||.|||+++|++|++|++++||+||||++|+
T Consensus 197 PG~~~~Ysn~~~~-lLg~iie~vtG~~~~~~~~e~If~PLgM~~t~ 241 (432)
T PRK03642 197 PGSKHIYSDVDYM-LLGFIVESITGQPLDRYVEESIYRPLGLTHTV 241 (432)
T ss_pred CCCceEecchHHH-HHHHHHHHHhCCCHHHHHHHhhhcccCCCcCc
Confidence 9999999999998 99999999999999999999999999999874
No 10
>PRK13128 D-aminopeptidase; Reviewed
Probab=99.98 E-value=4.3e-32 Score=298.59 Aligned_cols=183 Identities=22% Similarity=0.321 Sum_probs=157.0
Q ss_pred HHHHHHHHHHhccCCCccceEEEEEECCeEEEEeeeeccCCCCCCCCCCCCceeecCCcHHHHHHHHHHHHHcCCCCCCC
Q 005995 479 EAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEE 558 (666)
Q Consensus 479 ~~~l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SvsK~~ta~~i~~lve~G~l~ldd 558 (666)
.+.++++++..+++..+||++++|+++|+++++.+||+++...+.|++++|+|+|||+||+|||+++++|+++|+ +|||
T Consensus 6 ~~~l~~~v~~l~~~~~~Pg~avaVv~~G~iv~~~~~G~ad~~~~~p~t~dT~f~IaSiTK~fTa~~il~Lveeg~-~LDd 84 (518)
T PRK13128 6 LPTLEAFVHAIPQNYKGPGGAVAVVKDGEVVLRHAWGFADLARRKAMTPETRMPICSVSKQFTCAVLLDCIGEPE-MLDA 84 (518)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEECCEEEEEEeEEeeccccCCCCCCCCeEechhhHHHHHHHHHHHHHhcCC-CCCC
Confidence 456777777777878899999999999999999999999999999999999999999999999999999999985 9999
Q ss_pred ccccccccCccCCCCcccHHHHhcCcCCCCCCCCCCc--CCCCCCCCCHHHHHHHHhc-cCCCCCCCCceecccCcHHHH
Q 005995 559 NIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLS--SENPLLICDWDECLNRIAL-SAPETEPGQEQLYHYLSFGWL 635 (666)
Q Consensus 559 ~v~~ylp~~~~~~~~~iTi~~LLthtSGl~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~~~Ys~~~~~~l 635 (666)
||.+|+|+|.. .+|||+|||+||||++++..... ...+...+..++....+.. .++.++||+.|.|||.||. +
T Consensus 85 pv~~yLPe~~~---~~iTvr~LLtHTSGl~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~PGt~~~YSN~gy~-L 160 (518)
T PRK13128 85 ALAAYLDQFED---PRPAVRDLCNNQSGLRDYWALTVLCGAAPEGIFLPDQAQNLLRRLKTTHFAPGTHYSYCNGNFR-I 160 (518)
T ss_pred cHHHhcCCCCC---CCChHHHHhhCCCCCCccchhhhhcccccccCCCHHHHHHHHHhhccccCCCCCeeEEeCHHHH-H
Confidence 99999999975 36999999999999996532111 1112223445566655554 3568999999999999998 9
Q ss_pred HHHHHHHHhCCCHHHHHHHhcccccCCCCCC
Q 005995 636 CGGIIERASGKKFQEILEEGIIQPLSIDALQ 666 (666)
Q Consensus 636 l~~iie~vtg~~~~~~l~~~i~~PLgm~~t~ 666 (666)
||.|||+++|++|++|++++||+||||++|+
T Consensus 161 Lg~iIE~vtG~~~~~~l~~~If~PLGM~~T~ 191 (518)
T PRK13128 161 LADLIEQHTGRSLADLLAERIFAPAGMKTAE 191 (518)
T ss_pred HHHHHHHHhCCCHHHHHHHhhhcccCCCccc
Confidence 9999999999999999999999999999984
No 11
>PF00144 Beta-lactamase: Beta-lactamase; InterPro: IPR001466 This entry represents the serine beta-lactamase-like superfamily. It is a group of diverse group of sequences that includes D-alanyl-D-alanine carboxypeptidase B, aminopeptidase (DmpB), alkaline D-peptidase, animal D-Ala-D-Ala carboxypeptidase homologues and the class A and C beta-lactamases and eukaryotic beta-lactamase homologues which are variously described as: transesterases, non-ribosomal peptide synthetases and hypothetical proteins. Many are serine peptidases belonging to MEROPS peptidase families S11 (D-Ala-D-Ala carboxypeptidase A family) and S12 (D-Ala-D-Ala carboxypeptidase B family, clan SE). The beta-lactamases are classified as both S11 and S12 non-peptidase homologues; these either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. Beta-lactamase catalyses the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins []. There are four groups, classed A, B, C and D according to sequence, substrate specificity, and kinetic behaviour: class A (penicillinase-type) is the most common []. The genes for class A beta-lactamases are widely distributed in bacteria, frequently located on transmissible plasmids in Gram-negative organisms, although an equivalent chromosomal gene has been found in a few species []. Class A, C and D beta-lactamases are serine-utilising hydrolases - class B enzymes utilise a catalytic zinc centre instead. The 3 classes of serine beta-lactamase are evolutionarily related and belong to a superfamily that also includes DD-peptidases and other penicillin-binding proteins []. All these proteins contain an S-x-x-K motif, the Ser being the active site residue. Although clearly related, however, the sequences of the 3 classes of serine beta-lactamases vary considerably outside the active site. ; PDB: 1CI8_A 1CI9_B 1PW8_A 1PW1_A 1CEF_A 3PTE_A 1MPL_A 1PWG_A 1CEG_A 1IKG_A ....
Probab=99.98 E-value=9e-33 Score=292.80 Aligned_cols=182 Identities=30% Similarity=0.512 Sum_probs=160.6
Q ss_pred HHHHHHHhccCCCccceEEEEEECCeEEEEeeeeccCCCCCCCCCCCCceeecCCcHHHHHHHHHHHHHcCCCCCCCccc
Q 005995 482 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (666)
Q Consensus 482 l~~~l~~~~~~~~~~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SvsK~~ta~~i~~lve~G~l~ldd~v~ 561 (666)
+++.+++.+++..+||++++|+++|+++++.++|+++...+.|++++|+|++||+||+||++++++|+++|+|+||+||.
T Consensus 1 ~~~~i~~~~~~~~~~g~a~~v~~~g~~~~~~~~G~~~~~~~~~~~~~t~~~i~SvsK~~ta~~v~~l~~~G~l~ld~~v~ 80 (329)
T PF00144_consen 1 IDRIIEQFMERYGIPGAAVAVIHNGKIVYEQYYGYADKQTGKPMTPDTVFRIGSVSKSFTATAVMQLIDEGKLDLDDPVS 80 (329)
T ss_dssp HHHHHHHHHHHTTESEEEEEEEETTEEEEEEEEEEEETTTTEEESTTSBEEEGGGHHHHHHHHHHHHHHTTSSGTTSBGG
T ss_pred ChHHHHHHHHhCCCcEEEEEEEECCEEEEEEEEeecccccCCCCCccceeeccCCcceeehhhhhhhhccccccccCccc
Confidence 46677777778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCccCCCCcccHHHHhcCcCCCCCCCCCCcCCCCCCCCCHHHHHHHHhccCCCCCCCCceecccCcHHHHHHHHHH
Q 005995 562 NIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIE 641 (666)
Q Consensus 562 ~ylp~~~~~~~~~iTi~~LLthtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~Ys~~~~~~ll~~iie 641 (666)
+|+|++.....++|||+|||+||||++............ ...+++++.+...++.++||+.|.|||.+|. |||.+||
T Consensus 81 ~ylp~~~~~~~~~iTi~~LL~htSGl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~pg~~~~Ysn~~~~-ll~~ile 157 (329)
T PF00144_consen 81 KYLPEFPDPGKEKITIRDLLTHTSGLPDYEASDELFGDK--PFWDELLQYLANLPLNFPPGTQFAYSNTNYQ-LLGEILE 157 (329)
T ss_dssp GTTTTGTTCGGTTEBHHHHHTTHSSHSSSSHTTTHTSHH--HHHHHHHHHHHHSCSSSSTTSEEE--HHHHH-HHHHHHH
T ss_pred ccccccccccccCcccceeceeecCCCcccccccccccc--cchhHHHhhhhcccccccccccccccCcchh-hhhHHHH
Confidence 999988777778899999999999999874322111100 0126889999999999999999999999998 9999999
Q ss_pred HHhCCCHHHHHHHhcccccCCCCCC
Q 005995 642 RASGKKFQEILEEGIIQPLSIDALQ 666 (666)
Q Consensus 642 ~vtg~~~~~~l~~~i~~PLgm~~t~ 666 (666)
+++|++|+++++++||+||||++|.
T Consensus 158 ~~tg~~~~~~~~~~i~~plgm~~t~ 182 (329)
T PF00144_consen 158 RVTGKSFEELLQENIFQPLGMKHTG 182 (329)
T ss_dssp HHHTSHHHHHHHHHTTTTTTSTTEE
T ss_pred HhccchhHHHHHHHHHHHhhccccc
Confidence 9999999999999999999999973
No 12
>COG1680 AmpC Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]
Probab=99.96 E-value=5.1e-29 Score=270.52 Aligned_cols=169 Identities=31% Similarity=0.483 Sum_probs=142.5
Q ss_pred cceEEEEEECCeEEEEeeeeccCCCCCCCCCCCCceeecCCcHHHHHHHHHHHHHcCCCCCCCcccccccc---CccCCC
Q 005995 496 LGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPE---FKSNGK 572 (666)
Q Consensus 496 ~G~~v~v~~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SvsK~~ta~~i~~lve~G~l~ldd~v~~ylp~---~~~~~~ 572 (666)
+|++++++.+|++++...+|+.+...+.+++++|+|.|+|+||+|||+++++|+|+|+|+|||||++|+|+ .....
T Consensus 54 ~g~a~av~~~g~~~~~~~~g~~~~~~~~~~~~~t~f~i~S~TK~~ta~~i~~LveeG~l~lddpV~~ylP~~~~~~~~~- 132 (390)
T COG1680 54 PGLALAVVLDGKTVVAKGYGVADEGYGGPVTPPTVFRIASVTKSFTATLLGKLVEEGKLDLDDPVSKYLPEGKDPATGG- 132 (390)
T ss_pred CceEEEEEECCEEEEEeccccccccccCCCCCCceeeehhhhHHHHHHHHHHHHHcCCCCCCchHHHhCCCccCCcCCc-
Confidence 59999999999999999999999999999999999999999999999999999999999999999999996 23333
Q ss_pred CcccHHHHhcCcCCCCCCCCCCcCCCCCCCCCHHHHHHHHhccC--CCCCCCCceecccCcHHHHHHHHHHHHhCCCHHH
Q 005995 573 DLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSA--PETEPGQEQLYHYLSFGWLCGGIIERASGKKFQE 650 (666)
Q Consensus 573 ~~iTi~~LLthtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~pg~~~~Ys~~~~~~ll~~iie~vtg~~~~~ 650 (666)
..|||+|||+||||++.................+.+.+.+...+ ...+||+.+.|||.+|. +||+|+|+++|++|++
T Consensus 133 ~~iTi~~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pG~~~~Ysn~~~~-lLg~ive~v~G~~~~~ 211 (390)
T COG1680 133 APITLRDLLTHTSGLPFPEDYAYAVPKRLVQDQEAALEYLASLPPELAPPPGTAFAYSNSNYG-LLGAILERVTGKPLEE 211 (390)
T ss_pred cceeHHHhhhcccCCCCcccccccccchhhhhHHHHHHHHHhccccccCCCCcceeeecccHH-HHHHHHHHhcCCCHHH
Confidence 58999999999999997222101111111223455555666666 46677999999999999 9999999999999999
Q ss_pred HHHHhcccccCCCCCC
Q 005995 651 ILEEGIIQPLSIDALQ 666 (666)
Q Consensus 651 ~l~~~i~~PLgm~~t~ 666 (666)
+++++||+||||++|.
T Consensus 212 ~~~~~i~~PLGm~~t~ 227 (390)
T COG1680 212 LLRERIFEPLGMTSTG 227 (390)
T ss_pred HHHHHhhcccCCCccc
Confidence 9999999999999873
No 13
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=99.94 E-value=2.5e-27 Score=210.57 Aligned_cols=117 Identities=38% Similarity=0.574 Sum_probs=110.4
Q ss_pred HHhCCChhccccccCccccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCC--CChHHHH
Q 005995 108 REFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ--YDFNPII 185 (666)
Q Consensus 108 ~~~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~--~~~~~~~ 185 (666)
++||.+++++|++||++||||||+||||+|++++|++||||||||++++.+..|+++++.++.++.+..+. +++..++
T Consensus 1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (119)
T PF03109_consen 1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFRRLDLEEIV 80 (119)
T ss_pred CCcCCCHHHHHHHCCcchhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHcccccccCHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999987665 7999999
Q ss_pred HHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee
Q 005995 186 DEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI 237 (666)
Q Consensus 186 ~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~ 237 (666)
+++.+.+.+|+||++|++|+++++++|. +.+.+.||++|
T Consensus 81 ~e~~~~l~~ElDf~~Ea~n~~~~~~~~~-------------~~~~v~vP~vy 119 (119)
T PF03109_consen 81 DEFRDSLLEELDFRREAANLERFRKNFA-------------DSPRVYVPKVY 119 (119)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHhC-------------CCCCEecCCCC
Confidence 9999999999999999999999999986 34689999986
No 14
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.86 E-value=5.2e-21 Score=186.22 Aligned_cols=182 Identities=18% Similarity=0.217 Sum_probs=121.2
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
.+||+||+|+||+|+..+|+.||||+.+++.... ..+.+.+.....+.. .....+...++.+ .+..|.+
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---------~~~~E~~ 71 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSF-KDRDKYIEGDPRFRS-RYSKSNPRKLVFA---------WAEKEFR 71 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceE-eeHHHHhcCCccccc-ccccCCHHHHHHH---------HHHHHHH
Confidence 5899999999999998789999999999985421 111111000000000 0000122222222 2346889
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHH---HHHHHHHHHHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQK---VVEEITRAYAH 280 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~---~~~~l~~~~l~ 280 (666)
++.++.+ +++.+|.++.....+|||||++|.++... .+.....+... ++..++.. +.
T Consensus 72 ~l~~l~~------------------~~i~~p~~~~~~~~~lVmE~~~g~~~~~~-~l~~~~~~~~~~~~i~~~l~~~-l~ 131 (190)
T cd05145 72 NLKRLYE------------------AGVPVPEPILLKKNVLVMEFIGDDGSPAP-RLKDVPLEEEEAEELYEQVVEQ-MR 131 (190)
T ss_pred HHHHHHh------------------CCCCCceEEEecCCEEEEEEecCCCchhh-hhhhccCCHHHHHHHHHHHHHH-HH
Confidence 9998875 35678888876677999999999855432 12333444333 34444433 66
Q ss_pred Hhhh-cCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 005995 281 QIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA 346 (666)
Q Consensus 281 ~i~~-~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~~~l~~a~~~~d~~~~~~~~~ 346 (666)
++|. .|++|+||||+||+++ +++++|+|||+++.++.. ...+++.+|++.+...|.
T Consensus 132 ~lH~~~givHrDlkP~NIll~---~~~~~liDFG~a~~~~~~-------~~~~~~~~~~~~~~~~~~ 188 (190)
T cd05145 132 RLYQEAGLVHGDLSEYNILYH---DGKPYIIDVSQAVELDHP-------NALEFLRRDIRNINRFFR 188 (190)
T ss_pred HHHHhCCEecCCCChhhEEEE---CCCEEEEEcccceecCCC-------CHHHHHHHHHHHHHHHhh
Confidence 7787 9999999999999997 378999999999998765 345567888888888775
No 15
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.86 E-value=5.3e-21 Score=185.68 Aligned_cols=183 Identities=16% Similarity=0.166 Sum_probs=120.5
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
..||+||+|+||+|+..+|++||||+++++.......| ..+....+ +.......+...++.++. ..|.+
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~E~~ 71 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRD-RYVSGEFR-FRHGYCKSNPRKMVRTWA---------EKEMR 71 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHH-HhhcCCch-hhccccCCCHHHHHHHHH---------HHHHH
Confidence 47999999999999988999999999998754322211 10000000 000001223333333322 35888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHH--HHHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA--YAHQ 281 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~--~l~~ 281 (666)
++.++.+ +++.+|.++.....+|||||++|..+.... +....++...+...+.++ .+.+
T Consensus 72 ~l~~l~~------------------~~v~~p~~~~~~~~~iVmE~i~g~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~ 132 (190)
T cd05147 72 NLKRLVT------------------AGIPCPEPILLKSHVLVMEFIGDDGWAAPR-LKDAPLSESKARELYLQVIQIMRI 132 (190)
T ss_pred HHHHHHH------------------CCCCCCcEEEecCCEEEEEEeCCCCCcchh-hhcCCCCHHHHHHHHHHHHHHHHH
Confidence 9998865 234566666666779999999997665432 333456666666666553 3677
Q ss_pred h-hhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 005995 282 I-YVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA 346 (666)
Q Consensus 282 i-~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~~~l~~a~~~~d~~~~~~~~~ 346 (666)
+ |..|++||||||+|||++ +++++|||||++.......-. .++.+|.+.+.+.|.
T Consensus 133 l~H~~giiHrDlkP~NIli~---~~~v~LiDFG~a~~~~~~~~~-------~~~~~d~~~~~~~f~ 188 (190)
T cd05147 133 LYQDCRLVHADLSEYNLLYH---DGKLYIIDVSQSVEHDHPHAL-------EFLRMDCVNVNDFFR 188 (190)
T ss_pred HHHhCCcccCCCCHHHEEEE---CCcEEEEEccccccCCCcCHH-------HHHHHHHHHHHHHhc
Confidence 7 689999999999999998 368999999999866544322 345677777776663
No 16
>smart00090 RIO RIO-like kinase.
Probab=99.77 E-value=4.3e-18 Score=170.97 Aligned_cols=185 Identities=20% Similarity=0.266 Sum_probs=125.7
Q ss_pred cccccceeeeeEEEE--ecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 124 TPLATASIAQVHRAT--LVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~--l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
++||+|++|+||+|+ ..+|++||||+.+++.......+.. ............+.... .+..+..|
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---------~~~~~~~E 100 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRY----VDGDFRFKYRKINPRKL---------VRLWAEKE 100 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhh----cccchhhccCCCCHHHH---------HHHHHHHH
Confidence 589999999999998 5689999999998764321110000 00000000000011111 11235678
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHH---HHHHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQ---KVVEEITRAY 278 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~---~~~~~l~~~~ 278 (666)
++++.++.+. .+.+|+++..+..+|||||++|.++.... +.....+.. .++..++. .
T Consensus 101 ~~~L~~L~~~------------------~i~~p~~~~~~~~~lV~E~~~g~~L~~~~-~~~~~~~~~~~~~i~~qi~~-~ 160 (237)
T smart00090 101 FRNLQRLYEA------------------GVPVPKPIAWRRNVLVMEFIGGDGLPAPR-LKDVEPEEEEEFELYDDILE-E 160 (237)
T ss_pred HHHHHHHHhc------------------CCCCCeeeEecCceEEEEEecCCcccccc-cccCCcchHHHHHHHHHHHH-H
Confidence 9999998652 46788888766779999999998876542 112222222 33333333 3
Q ss_pred HHHhhhcC-ccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCCc
Q 005995 279 AHQIYVDG-FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (666)
Q Consensus 279 l~~i~~~g-~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (666)
+.++|..| ++|+|+||+||+++ +++++|+|||++...+.... .+++.+|.+.+...+.++|+.
T Consensus 161 l~~LH~~g~iiH~Dikp~NIli~---~~~i~LiDFg~a~~~~~~~~-------~~~~~~d~~~~~~~~~~~~~~ 224 (237)
T smart00090 161 MRKLYKEGELVHGDLSEYNILVH---DGKVVIIDVSQSVELDHPMA-------LEFLERDIRNIIRFFRRKGVD 224 (237)
T ss_pred HHHHHhcCCEEeCCCChhhEEEE---CCCEEEEEChhhhccCCcch-------HHHHHHHHHHHHHHHHHcCCC
Confidence 78899999 99999999999998 37899999999998877553 356899999999999999985
No 17
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.74 E-value=2.3e-17 Score=161.65 Aligned_cols=170 Identities=16% Similarity=0.248 Sum_probs=115.4
Q ss_pred ccccccceeeeeEEEEecCCCEEEEEeeCCChHHH--HHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHH
Q 005995 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTI--ILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~--~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 200 (666)
.++||+|++|+||+|..++|+.||||+.+++.... ...+.+. + . . ........ ..+..+..
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~---~-~------~-~~~~~~~~------~~~~~~~~ 82 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDY---L-G------D-RKHASWLY------LSRLAAQK 82 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHH---H-h------c-cccchhHH------HhHHHHHH
Confidence 36899999999999998899999999987654211 1100000 0 0 0 00000011 12223556
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHHH
Q 005995 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 280 (666)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l~ 280 (666)
|...+..+.+ .++.+|.++.....++||||++|.++.+.... .....++..++.. +.
T Consensus 83 E~~~l~~l~~------------------~~i~v~~~~~~~~~~lv~e~~~g~~L~~~~~~----~~~~~~~~~i~~~-l~ 139 (198)
T cd05144 83 EFAALKALYE------------------EGFPVPKPIDWNRHAVVMEYIDGVELYRVRVL----EDPEEVLDEILEE-IV 139 (198)
T ss_pred HHHHHHHHHH------------------cCCCCCceeecCCceEEEEEeCCcchhhcccc----ccHHHHHHHHHHH-HH
Confidence 7777777654 13567777777778999999999988765321 2334455555554 46
Q ss_pred HhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHHH----HHHHHHHH
Q 005995 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQAL----AKMFFAAA 334 (666)
Q Consensus 281 ~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~----~~l~~a~~ 334 (666)
++|..|++|+|+||+||+++ ++++++|+|||++..++.+.+..+ ...++++.
T Consensus 140 ~lh~~gi~H~Dl~p~Nill~--~~~~~~liDfg~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (198)
T cd05144 140 KAYKHGIIHGDLSEFNILVD--DDEKIYIIDWPQMVSTDHPNAEELLDRDVENILRFF 195 (198)
T ss_pred HHHHCCCCcCCCCcccEEEc--CCCcEEEEECCccccCCCccHHHHHHHHHHHHHHHH
Confidence 78899999999999999998 468999999999999999888886 45555543
No 18
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.72 E-value=1.7e-17 Score=169.41 Aligned_cols=141 Identities=16% Similarity=0.220 Sum_probs=91.2
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
.-||+||||.||+|+++ +|..||||-.... .+.....+.+.. |.
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~-----------------------------~l~~k~~e~L~~------Ei 60 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKK-----------------------------KLNKKLVELLLS------EI 60 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhh-----------------------------ccCHHHHHHHHH------HH
Confidence 34999999999999986 7899999954221 000111112222 33
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR-- 276 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~-- 276 (666)
+.++.++| .+|-.++ + .+.-+||||||+|++|+++. ...+.-.+..++..++
T Consensus 61 ~iLkel~H--------------------~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi--~~~~~l~e~t~r~Fm~QL 118 (429)
T KOG0595|consen 61 KILKELKH--------------------PNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYI--RRRGRLPEATARHFMQQL 118 (429)
T ss_pred HHHHhcCC--------------------cceeeEEEEEecCCeEEEEEEeCCCCCHHHHH--HHcCCCCHHHHHHHHHHH
Confidence 34444332 2233333 3 45568999999999999884 3443222233332222
Q ss_pred -HHHHHhhhcCccccCCCcCceEEeeCCC----CceEEEecccccccCHH
Q 005995 277 -AYAHQIYVDGFFNGDPHPGNFLVSKDPP----HRPILLDFGLTKKLSSS 321 (666)
Q Consensus 277 -~~l~~i~~~g~~H~D~hPgNilv~~~~~----~~i~liDFG~~~~l~~~ 321 (666)
..++.+|+.+|+|||+||.|||++.... -.++|.|||+++.+.+.
T Consensus 119 A~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~ 168 (429)
T KOG0595|consen 119 ASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG 168 (429)
T ss_pred HHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence 2277789999999999999999985312 34789999999999754
No 19
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.71 E-value=2.4e-16 Score=152.82 Aligned_cols=168 Identities=20% Similarity=0.266 Sum_probs=106.6
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
++||+|++|+||+|+..+|++||||+.+++.......+...+ ...... ....+...+. +.....|.+
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~---------~~~~~~e~~ 69 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRT---GDYRFG-RKKSNWRYLS---------RLWAEKEFR 69 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhH---HHHHhc-cCCcchhhhh---------hHHHHHHHH
Confidence 579999999999999888999999999886543222221110 000000 0011111111 111234566
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcC--CCHHHHHHHHHHHHHHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFG--VNKQKVVEEITRAYAHQ 281 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~--~~~~~~~~~l~~~~l~~ 281 (666)
++.++.+ .++.+|+++.+...+|||||++|..+... .+.... .....++..++.. +..
T Consensus 70 ~l~~l~~------------------~~~~~~~~~~~~~~~lv~e~~~g~~~~~~-~l~~~~~~~~~~~~~~~~~~~-l~~ 129 (187)
T cd05119 70 NLKRLYE------------------AGVPVPKPIDLNRHVLVMEFIGGDGIPAP-RLKDVRLLEDPEELYDQILEL-MRK 129 (187)
T ss_pred HHHHHHH------------------cCCCCCceEecCCCEEEEEEeCCCCccCh-hhhhhhhcccHHHHHHHHHHH-HHH
Confidence 6666654 24678888887788999999999443221 011111 1233444444333 667
Q ss_pred hhh-cCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHHHH
Q 005995 282 IYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALA 327 (666)
Q Consensus 282 i~~-~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~~ 327 (666)
+|. .|++|+|+||+||+++ ++.++|+|||++.....+....+.
T Consensus 130 lh~~~~ivH~Dl~p~Nili~---~~~~~liDfg~a~~~~~~~~~~~~ 173 (187)
T cd05119 130 LYREAGLVHGDLSEYNILVD---DGKVYIIDVPQAVEIDHPNAEEFL 173 (187)
T ss_pred HhhccCcCcCCCChhhEEEE---CCcEEEEECcccccccCcchHHHH
Confidence 788 9999999999999998 478999999999988876666653
No 20
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.70 E-value=1.5e-16 Score=156.70 Aligned_cols=142 Identities=20% Similarity=0.275 Sum_probs=99.8
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.++.|++|+||.+.. ++..+|||+.+|.....-. . + ..+...=-|.+|++
T Consensus 37 ~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~---~----~---------------------~~f~~g~~~e~Ea~ 87 (232)
T PRK10359 37 KVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTER---F----L---------------------KSFVKGDYYENLIV 87 (232)
T ss_pred EEecCCCceEEEEEec-CCCcEEEEEechhcCchHH---H----H---------------------HhhhhhHHHHHHHH
Confidence 6899999999999766 6789999999987543210 0 0 00001112677899
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----------cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~ 273 (666)
++.++.+ +++..|..+. ++..+|||||++|.+|.++.. .+. .....
T Consensus 88 ~l~rL~~------------------~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~-~~~~~ 143 (232)
T PRK10359 88 QTDRVRS------------------EGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE-DVKAK 143 (232)
T ss_pred HHHHHHH------------------CCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH-HHHHH
Confidence 9999866 2444444431 456899999999999877632 122 22333
Q ss_pred HHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHH
Q 005995 274 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (666)
Q Consensus 274 l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~ 322 (666)
+ ...+.++|..|++|||||||||+++ ++| ++|+|||++....++.
T Consensus 144 i-~~~l~~lH~~gi~H~Dikp~Nili~--~~g-i~liDfg~~~~~~e~~ 188 (232)
T PRK10359 144 I-KASIESLHQHGMVSGDPHKGNFIVS--KNG-LRIIDLSGKRCTAQRK 188 (232)
T ss_pred H-HHHHHHHHHcCCccCCCChHHEEEe--CCC-EEEEECCCcccccchh
Confidence 3 3358899999999999999999998 446 9999999998875443
No 21
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.68 E-value=8.8e-17 Score=154.35 Aligned_cols=173 Identities=19% Similarity=0.288 Sum_probs=113.5
Q ss_pred eEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCC------CCChHHHHHHHHHhchhhhcHHHHHHHHHH
Q 005995 134 VHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEP------QYDFNPIIDEWCKEAPKELDFNSEAENTRI 207 (666)
Q Consensus 134 V~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~------~~~~~~~~~e~~~~~~~Eld~~~Ea~n~~~ 207 (666)
||.|...+|.+||||+.+.+.... .. .......... ..+...+. .....+|++++.+
T Consensus 2 Vy~~~~~~~~~~a~K~~r~~~~~F-k~-------~~~y~~~~~r~~~~~~~~~~~~~~---------~~~~~~E~~~L~~ 64 (188)
T PF01163_consen 2 VYHAIDPDGEEVAVKIYRTGRTSF-KR-------RKKYRDYDYRFKKYRHKSSWRYLI---------REWAKKEFRNLKR 64 (188)
T ss_dssp EEEEEECTTEEEEEEEE-S---SS--H-------HHHHTTTSTTSTTC--G--CHHHH---------HHHHHHHHHHHHH
T ss_pred EEEEECCCCCEEEEEEeccCceEE-EE-------eeeeecccchhcccccccCHHHHH---------HHHHHHHHHHHHH
Confidence 899998899999999998764321 11 1111111000 00111122 2335668889888
Q ss_pred HHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecC--CccCCChhhHHHcCCCHHHHHHHHHHHHHHHhhhc
Q 005995 208 VSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMD--GIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVD 285 (666)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~--G~~L~~~~~~~~~~~~~~~~~~~l~~~~l~~i~~~ 285 (666)
+.. .++.||+++..++++|||||++ |.++..+........+...+...+++.+...+|..
T Consensus 65 l~~------------------~Gv~vP~p~~~~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~ 126 (188)
T PF01163_consen 65 LYE------------------AGVPVPKPYDYNRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKA 126 (188)
T ss_dssp CCC------------------TT-SS--EEEEETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCT
T ss_pred HHH------------------CCccCCcEEEEeCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhc
Confidence 643 3689999999889999999999 99988765433223456778888888778888999
Q ss_pred CccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCCc
Q 005995 286 GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (666)
Q Consensus 286 g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (666)
|++|+||++.|||++ ++++++||||++.......-.. ++.+|.+.+.+.|.+.|..
T Consensus 127 givHGDLs~~NIlv~---~~~~~iIDf~qav~~~~p~a~~-------~l~RDi~ni~~fF~~~~~~ 182 (188)
T PF01163_consen 127 GIVHGDLSEYNILVD---DGKVYIIDFGQAVDSSHPNAEE-------LLRRDIENIIRFFKKKGVQ 182 (188)
T ss_dssp TEEESS-STTSEEEE---TTCEEE--GTTEEETTSTTHHH-------HHHHHHHHHHHHHHCCC--
T ss_pred CceecCCChhhEEee---cceEEEEecCcceecCCccHHH-------HHHHHHHHHHHHHHHhCCC
Confidence 999999999999998 3489999999998876543333 4678999999999988874
No 22
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.67 E-value=2.2e-16 Score=166.25 Aligned_cols=149 Identities=17% Similarity=0.199 Sum_probs=98.4
Q ss_pred ccC-ccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 120 DFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 120 ~~~-~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
+|+ -++||.|+||+||.|+-+ +|+.+|+|+++.. ++ .
T Consensus 142 DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS-------~M----------------------------------~ 180 (550)
T KOG0605|consen 142 DFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKS-------EM----------------------------------L 180 (550)
T ss_pred cchhheeeccccceeEEEEEEccCCcEEeeecccHH-------HH----------------------------------H
Confidence 444 378999999999999976 7999999987642 11 0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHH
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~ 273 (666)
-+.+.+|...=|..+.. .....|-++|. ....+|||||++|+.+..++. ...-+.....---
T Consensus 181 ~~~Qv~hV~aERdiL~~-------------~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~-~~~~L~e~~arfY 246 (550)
T KOG0605|consen 181 KKNQVEHVRAERDILAE-------------VDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLM-RKDTLTEDWARFY 246 (550)
T ss_pred hhhhHHHHHHHHHHhhh-------------cCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHH-hcCcCchHHHHHH
Confidence 11122222222332221 01234556664 455699999999998776532 1122233333333
Q ss_pred HHHH--HHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHH
Q 005995 274 ITRA--YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQA 325 (666)
Q Consensus 274 l~~~--~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~ 325 (666)
+++. .+..||.+|++||||||.|+||+ ..|.|+|.|||++.-+....+..
T Consensus 247 iaE~vlAI~~iH~~gyIHRDIKPdNlLiD--~~GHiKLSDFGLs~gl~~~~~~~ 298 (550)
T KOG0605|consen 247 IAETVLAIESIHQLGYIHRDIKPDNLLID--AKGHIKLSDFGLSTGLDKKHRIE 298 (550)
T ss_pred HHHHHHHHHHHHHcCcccccCChhheeec--CCCCEeeccccccchhhhhhhhh
Confidence 3333 37889999999999999999999 46999999999998777666543
No 23
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.67 E-value=2.1e-16 Score=155.27 Aligned_cols=148 Identities=21% Similarity=0.270 Sum_probs=101.7
Q ss_pred ccccceeeeeEEEEec-CCCEEEEEeeC-----CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 125 PLATASIAQVHRATLV-DGRQVVVKVQH-----QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~-~g~~VAVKv~~-----p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
-+|.||+|.|++++.+ +|+-||||... |.+.+..-+++++|+.+-+
T Consensus 9 kvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH---------------------------- 60 (396)
T KOG0593|consen 9 KVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKH---------------------------- 60 (396)
T ss_pred ccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhccc----------------------------
Confidence 4899999999999987 79999999754 2233333333333332210
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
.|+..+-+.|+. ..+..||.|||+-.-|.+++ ....|.+.+.+-..+.+.+
T Consensus 61 ----~NLVnLiEVFrr------------------------krklhLVFE~~dhTvL~eLe-~~p~G~~~~~vk~~l~Q~l 111 (396)
T KOG0593|consen 61 ----ENLVNLIEVFRR------------------------KRKLHLVFEYCDHTVLHELE-RYPNGVPSELVKKYLYQLL 111 (396)
T ss_pred ----chHHHHHHHHHh------------------------cceeEEEeeecchHHHHHHH-hccCCCCHHHHHHHHHHHH
Confidence 233333333321 34457999999986666553 2346788777777666655
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC---HHHHHHHHHHHH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS---SSMKQALAKMFF 331 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~---~~~~~~~~~l~~ 331 (666)
+...|.++++|||+||.||||+. +|.++|+|||.++.++ +...+.++.-|+
T Consensus 112 ~ai~~cHk~n~IHRDIKPENILit~--~gvvKLCDFGFAR~L~~pgd~YTDYVATRWY 167 (396)
T KOG0593|consen 112 KAIHFCHKNNCIHRDIKPENILITQ--NGVVKLCDFGFARTLSAPGDNYTDYVATRWY 167 (396)
T ss_pred HHhhhhhhcCeecccCChhheEEec--CCcEEeccchhhHhhcCCcchhhhhhhhhhc
Confidence 66788999999999999999994 5899999999999987 333444455554
No 24
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.64 E-value=2.2e-16 Score=171.21 Aligned_cols=151 Identities=19% Similarity=0.302 Sum_probs=104.4
Q ss_pred ccccCccccccceeeeeEEEEec-CCCEEEEEeeCCCh----HHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhc
Q 005995 118 FMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGI----KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (666)
Q Consensus 118 f~~~~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~----~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~ 192 (666)
+..+-.+-+|.|++|+||+|+.+ +|+.||||..++.. .+....++++++++-
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn----------------------- 69 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN----------------------- 69 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC-----------------------
Confidence 34445578999999999999965 89999999876522 112222222222220
Q ss_pred hhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhh--HHHcCCC
Q 005995 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCES--LEAFGVN 266 (666)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~--~~~~~~~ 266 (666)
..|+.++ +.||+.- . +...|||||||.|++|..... .+..|+.
T Consensus 70 ---------h~NIVk~----------------------f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLp 118 (732)
T KOG4250|consen 70 ---------HPNIVKL----------------------FDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLP 118 (732)
T ss_pred ---------chhhhhh----------------------cccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCC
Confidence 1122222 1222221 1 566799999999999987633 1345778
Q ss_pred HHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCce--EEEecccccccCHHH
Q 005995 267 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGLTKKLSSSM 322 (666)
Q Consensus 267 ~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i--~liDFG~~~~l~~~~ 322 (666)
..++...+..+. +++++++||+|||||||||++-...+|+. +|+|||+++.+++..
T Consensus 119 E~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s 178 (732)
T KOG4250|consen 119 ESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS 178 (732)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC
Confidence 888877776654 88999999999999999999986555664 699999999998765
No 25
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.63 E-value=4.4e-16 Score=157.78 Aligned_cols=139 Identities=19% Similarity=0.222 Sum_probs=96.2
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
.-||+|+-|.||+++++ +|+-.|+|+++-++...+ ++++.+|++..++.
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~------------------------------~~Qi~rEl~il~~~ 134 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPAL------------------------------QKQILRELEILRSC 134 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHH------------------------------HHHHHHHHHHHhhC
Confidence 46999999999999986 889999999865544332 23333444333332
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cC-CCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SS-ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~-~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~ 277 (666)
. ..+|-..|. .. ...++||||+|++|+++... ...++...+.....++
T Consensus 135 ------~--------------------spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~-~g~i~E~~L~~ia~~V 187 (364)
T KOG0581|consen 135 ------Q--------------------SPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKR-VGRIPEPVLGKIARAV 187 (364)
T ss_pred ------C--------------------CCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhh-cCCCCHHHHHHHHHHH
Confidence 1 123334442 34 36799999999999987431 1224444444333333
Q ss_pred H--HHHhhh-cCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 278 Y--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 278 ~--l~~i~~-~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+ +.++|+ ++++|||+||.||||+ ..|+++|+|||.++.+...
T Consensus 188 L~GL~YLh~~~~IIHRDIKPsNlLvN--skGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 188 LRGLSYLHEERKIIHRDIKPSNLLVN--SKGEVKICDFGVSGILVNS 232 (364)
T ss_pred HHHHHHHhhccCeeeccCCHHHeeec--cCCCEEeccccccHHhhhh
Confidence 3 777885 9999999999999999 4699999999999988655
No 26
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.63 E-value=5e-15 Score=142.73 Aligned_cols=177 Identities=14% Similarity=0.158 Sum_probs=118.9
Q ss_pred cccccceeeeeEEEEecC-------CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHH---hhC---CCCChHHHHHHHHH
Q 005995 124 TPLATASIAQVHRATLVD-------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA---WAE---PQYDFNPIIDEWCK 190 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~-------g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~---~~~---~~~~~~~~~~e~~~ 190 (666)
.+|++|--+.||.|...+ +..|||||.|......-. ...++. .+. ...+...++..+.
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~--------~~~y~~~~~rf~~~~~k~~~~~~~~~wa- 73 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKN--------RDKYIKDDYRFKDRFSKLNPRKIIRMWA- 73 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcC--------hhhhccCCcccccCcCCCCHHHHHHHHH-
Confidence 479999999999998653 489999999865432110 111111 000 0123444554444
Q ss_pred hchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCH---
Q 005995 191 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNK--- 267 (666)
Q Consensus 191 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~--- 267 (666)
..|++++.+++. .++.||+++...+++|||||++|..+... .+.....+.
T Consensus 74 --------~kE~r~L~rl~~------------------~Gv~vP~pi~~~~~~lvME~Ig~~~~~~~-~Lkd~~~~~~~~ 126 (197)
T cd05146 74 --------EKEMHNLKRMQK------------------AGIPCPEVVVLKKHVLVMSFIGDDQVPAP-KLKDAKLNDEEM 126 (197)
T ss_pred --------HHHHHHHHHHHH------------------cCCCCCeEEEecCCEEEEEEcCCCCccch-hhhccccCHHHH
Confidence 359999999887 26899999999999999999987533211 122222222
Q ss_pred HHHHHHHHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 005995 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA 346 (666)
Q Consensus 268 ~~~~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~~~l~~a~~~~d~~~~~~~~~ 346 (666)
..+...++..+...+|..|++|+||+|.|||+. +++++|||||++...+...-..+ +.+|.+.+.+.|.
T Consensus 127 ~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~---~~~v~iIDF~qav~~~hp~a~~~-------l~RD~~ni~~fF~ 195 (197)
T cd05146 127 KNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH---DGKVWFIDVSQSVEPTHPHGLEF-------LFRDCRNVIQFFQ 195 (197)
T ss_pred HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE---CCcEEEEECCCceeCCCCCHHHH-------HHHHHHHHHHHhc
Confidence 334455555555556899999999999999997 36899999999998876554443 5677777776664
No 27
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.62 E-value=1.4e-15 Score=145.06 Aligned_cols=137 Identities=23% Similarity=0.379 Sum_probs=100.1
Q ss_pred cccccceeeeeEEEEe-cCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l-~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
++||+||||-+|.|.. .+|++||||+-...+. +|. +..|+
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--------------------hpq-------------------L~yEs 61 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--------------------HPQ-------------------LLYES 61 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCC--------------------Ccc-------------------hhHHH
Confidence 6899999999999984 5899999998654432 121 33455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.-..+++ ++.+|.+.+ ..-+||||+.+ |.+|.++-......++.+.+.-..-+.+
T Consensus 62 kvY~iL~~-------------------g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml 121 (341)
T KOG1163|consen 62 KVYRILQG-------------------GVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQML 121 (341)
T ss_pred HHHHHhcc-------------------CCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHH
Confidence 54444443 577888875 34469999988 8999988766665566555444333333
Q ss_pred --HHHhhhcCccccCCCcCceEEeeC-CCCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~-~~~~i~liDFG~~~~l~ 319 (666)
++.+|.++|+||||||.|+|..-. ...++.|||||+++.+-
T Consensus 122 ~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 122 SRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred HHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 778899999999999999998632 13579999999999763
No 28
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.61 E-value=4.7e-16 Score=162.43 Aligned_cols=166 Identities=17% Similarity=0.210 Sum_probs=105.7
Q ss_pred CCChhccccccCccccccceeeeeEEEEe-cCCCEEEEEeeC-----CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHH
Q 005995 111 GESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQH-----QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPI 184 (666)
Q Consensus 111 g~~~~~~f~~~~~~pi~sgs~gqV~~a~l-~~g~~VAVKv~~-----p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~ 184 (666)
+..-.+.|+.++. ||.|.|||||+|+. .+|+.||+|-.+ ++....+.+
T Consensus 112 ~~r~~~~feki~k--IGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~R------------------------ 165 (560)
T KOG0600|consen 112 GPRRADSFEKIEK--IGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIR------------------------ 165 (560)
T ss_pred cccchHHHHHHHH--hcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHH------------------------
Confidence 3334456666665 99999999999995 489999999665 333333333
Q ss_pred HHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcce-eeeeeee---cCCCeeEeeecCCccCCChhhH
Q 005995 185 IDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ---SSETVLILEFMDGIRLNDCESL 260 (666)
Q Consensus 185 ~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vP~~~~---~~~~vLvmE~i~G~~L~~~~~~ 260 (666)
|...++++.| ++| ..-.+.. ++.-+||.||++- +|.-+...
T Consensus 166 ----------------EI~ILr~l~H------------------pNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~ 210 (560)
T KOG0600|consen 166 ----------------EIKILRRLDH------------------PNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSS 210 (560)
T ss_pred ----------------HHHHHHhcCC------------------CcccceeeEEEecCCceEEEEEecccc-hhhhhhcC
Confidence 3333333322 111 1112221 4667999999984 23222211
Q ss_pred HHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCH
Q 005995 261 EAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDH 338 (666)
Q Consensus 261 ~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~~~l~~a~~~~d~ 338 (666)
....++...+-..+-+++ ++++|..||+|||||..|||++ .+|.++|.|||+++.++......|..-+.-+..+-+
T Consensus 211 p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLid--n~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpP 288 (560)
T KOG0600|consen 211 PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILID--NNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPP 288 (560)
T ss_pred CCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEc--CCCCEEeccccceeeccCCCCcccccceEEeeccCh
Confidence 122344444444444444 7788999999999999999999 569999999999998887776655544444444444
Q ss_pred H
Q 005995 339 V 339 (666)
Q Consensus 339 ~ 339 (666)
+
T Consensus 289 E 289 (560)
T KOG0600|consen 289 E 289 (560)
T ss_pred H
Confidence 4
No 29
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.60 E-value=1.6e-16 Score=155.47 Aligned_cols=160 Identities=16% Similarity=0.188 Sum_probs=121.7
Q ss_pred HHHHHHHHHhCCChhccccccCccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCC
Q 005995 101 EVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQY 179 (666)
Q Consensus 101 ~~~~~l~~~~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~ 179 (666)
+..+.=+..+.++++|+|.-.+. +|.||+|.||+|..+ +|+.||||-..- ..|
T Consensus 18 ~~~KLd~~sL~K~PEEVFDi~~K--LGEGSYGSV~KAIH~EsG~v~AIK~VPV------~sD------------------ 71 (502)
T KOG0574|consen 18 DGFKLDSSALNKPPEEVFDIVGK--LGEGSYGSVHKAIHRESGHVLAIKKVPV------DTD------------------ 71 (502)
T ss_pred cccccChhhhcCChHHHHHHHHH--hcCCcchHHHHHHHhccCcEEEEEecCc------cch------------------
Confidence 44555677888999999987765 999999999999976 899999995422 222
Q ss_pred ChHHHHHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCC
Q 005995 180 DFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLN 255 (666)
Q Consensus 180 ~~~~~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~ 255 (666)
+.+++. |...+.++. ..+|.+.|. .++.++|||||..++++
T Consensus 72 -LQEIIK--------------EISIMQQC~--------------------S~yVVKYYGSYFK~sDLWIVMEYCGAGSiS 116 (502)
T KOG0574|consen 72 -LQEIIK--------------EISIMQQCK--------------------SKYVVKYYGSYFKHSDLWIVMEYCGAGSIS 116 (502)
T ss_pred -HHHHHH--------------HHHHHHHcC--------------------CchhhhhhhhhccCCceEeehhhcCCCcHH
Confidence 223332 222222221 123333332 57889999999999999
Q ss_pred ChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHH
Q 005995 256 DCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (666)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~ 323 (666)
|+..++...+...+++..+-..+ ++.+|.-.-+|||+|.||||++ .+|..+|.|||.++.+++.+.
T Consensus 117 DI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN--T~G~AKLADFGVAGQLTDTMA 184 (502)
T KOG0574|consen 117 DIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN--TDGIAKLADFGVAGQLTDTMA 184 (502)
T ss_pred HHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEc--ccchhhhhhccccchhhhhHH
Confidence 99888888888888888777665 7888888899999999999998 568999999999999987653
No 30
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.60 E-value=4.9e-15 Score=156.78 Aligned_cols=139 Identities=14% Similarity=0.232 Sum_probs=96.4
Q ss_pred ccccccceeeeeEEEEec--CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHH
Q 005995 123 ETPLATASIAQVHRATLV--DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~--~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 200 (666)
.+.||+|+||+||+|+.+ +|+.||||+..+..... ..+ . ..-.|.+
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~-~~~-------------------------~------~~~~~~~ 70 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWW-SKP-------------------------L------ARHLAAR 70 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccc-ccH-------------------------H------HHHHHHH
Confidence 357999999999999865 57888999865331100 000 0 0112667
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHHH
Q 005995 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 280 (666)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l~ 280 (666)
|++.+.++++ + -.+|.++..+..+|||||++|.+|... .. .....+...++ ..+.
T Consensus 71 E~~iL~~L~h------------------~-~iv~~l~~~~~~~LVmE~~~G~~L~~~---~~--~~~~~~~~~i~-~aL~ 125 (365)
T PRK09188 71 EIRALKTVRG------------------I-GVVPQLLATGKDGLVRGWTEGVPLHLA---RP--HGDPAWFRSAH-RALR 125 (365)
T ss_pred HHHHHHhccC------------------C-CCCcEEEEcCCcEEEEEccCCCCHHHh---Cc--cchHHHHHHHH-HHHH
Confidence 8888777654 1 235666666778999999999888522 11 11233444433 3377
Q ss_pred HhhhcCccccCC-CcCceEEeeCCCCceEEEecccccccCH
Q 005995 281 QIYVDGFFNGDP-HPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 281 ~i~~~g~~H~D~-hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
.+|..|++|||+ ||+|||++ .+++++|+|||+++.+.+
T Consensus 126 ~lH~~gIiHrDL~KP~NILv~--~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 126 DLHRAGITHNDLAKPQNWLMG--PDGEAAVIDFQLASVFRR 164 (365)
T ss_pred HHHHCCCeeCCCCCcceEEEc--CCCCEEEEECccceeccc
Confidence 899999999999 89999997 457899999999998865
No 31
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.60 E-value=9.9e-15 Score=144.38 Aligned_cols=142 Identities=20% Similarity=0.263 Sum_probs=101.0
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
++||+|++|.||+|+. +|..|+||+..|.....-..|.. .....+.+|++
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~-----------------------------~~~~~~~~E~~ 51 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDER-----------------------------IRRERTRREAR 51 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHH-----------------------------HHHHHHHHHHH
Confidence 4789999999999987 78899999877643221111110 01123566777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHHHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 281 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l~~ 281 (666)
++..+.+ +++.+|.++. .+..+|+|||++|.+|.+.... .......++..+.. .+.+
T Consensus 52 ~l~~l~~------------------~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~--~~~~~~~i~~~i~~-~l~~ 110 (211)
T PRK14879 52 IMSRARK------------------AGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINS--NGMEELELSREIGR-LVGK 110 (211)
T ss_pred HHHHHHH------------------CCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHh--ccHHHHHHHHHHHH-HHHH
Confidence 7777764 3467787774 6778999999999999876432 11122344444443 4778
Q ss_pred hhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 282 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 282 i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+|..|++|+|+||+|||++ ++.++++|||+++..+
T Consensus 111 lH~~~i~H~Dl~p~Nil~~---~~~~~liDf~~a~~~~ 145 (211)
T PRK14879 111 LHSAGIIHGDLTTSNMILS---GGKIYLIDFGLAEFSK 145 (211)
T ss_pred HHhCCcccCCCCcccEEEE---CCCEEEEECCcccCCC
Confidence 9999999999999999998 3789999999988754
No 32
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.59 E-value=3e-15 Score=152.89 Aligned_cols=146 Identities=23% Similarity=0.307 Sum_probs=98.6
Q ss_pred ccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
.+.+|+|.||.|-.|..+ +|+.|||||....--..- ......+.|..+|
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~------------------------------s~~~~~~~~v~~E 226 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGC------------------------------SRAIAKTRDVQNE 226 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccc------------------------------cccccchhhhHHH
Confidence 368999999999999864 899999999754211000 0011234456678
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcce-eeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCH----HHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK----QKVVEEIT 275 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~----~~~~~~l~ 275 (666)
.+.+.++.| |++ .+-..+. ....++||||++|+.|-+... ..+.-. +.+...++
T Consensus 227 ieILkkL~H------------------P~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll 286 (475)
T KOG0615|consen 227 IEILKKLSH------------------PNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLL 286 (475)
T ss_pred HHHHHhcCC------------------CCEEEEeeeeecCCceEEEEEEecCccHHHHHH--hccccccchhHHHHHHHH
Confidence 888887754 333 2333333 344599999999999877632 222222 22333333
Q ss_pred HHHHHHhhhcCccccCCCcCceEEeeC-CCCceEEEecccccccC
Q 005995 276 RAYAHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLS 319 (666)
Q Consensus 276 ~~~l~~i~~~g~~H~D~hPgNilv~~~-~~~~i~liDFG~~~~l~ 319 (666)
.+ +.++|+.|+.|||+||.|||+..+ .+-.+++.|||+++...
T Consensus 287 ~a-vkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g 330 (475)
T KOG0615|consen 287 TA-VKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG 330 (475)
T ss_pred HH-HHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc
Confidence 32 678899999999999999999854 23568999999999875
No 33
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.59 E-value=1.5e-15 Score=157.70 Aligned_cols=89 Identities=20% Similarity=0.328 Sum_probs=68.4
Q ss_pred CCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 241 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
..++||||++- .|.++.+-+...+....+...+.+++ +.+||++||||||+||+||||. +..-|+|.|||+++++
T Consensus 84 ~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~--~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 84 ILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS--GNDVIKIADFGLAREV 160 (538)
T ss_pred eEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec--ccceeEeccccccccc
Confidence 45799999974 66666555555566777777788877 8999999999999999999998 3467999999999988
Q ss_pred C--HHHHHHHHHHHHH
Q 005995 319 S--SSMKQALAKMFFA 332 (666)
Q Consensus 319 ~--~~~~~~~~~l~~a 332 (666)
. +...+.+..-|+.
T Consensus 161 ~SkpPYTeYVSTRWYR 176 (538)
T KOG0661|consen 161 RSKPPYTEYVSTRWYR 176 (538)
T ss_pred ccCCCcchhhhccccc
Confidence 4 3344455455543
No 34
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=99.58 E-value=4.8e-14 Score=137.35 Aligned_cols=186 Identities=19% Similarity=0.222 Sum_probs=131.3
Q ss_pred ccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHHH
Q 005995 125 PLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 204 (666)
+|.+|--+.||+|...++..|||||++......-..+-- +..-..+.....+...++..|.+ .|.+|
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Y----i~gd~Rf~~~~~~rr~lv~~W~~---------kEf~N 121 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRY----IQGDPRFRNSRSNRRKLVFAWAR---------KEFRN 121 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHH----HhcChhhhcCCCCHHHHHHHHHH---------HHHHH
Confidence 899999999999998889999999999765443221110 11000111112356666666664 48999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCC---CHHHHHHHHHHHHHHH
Q 005995 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGV---NKQKVVEEITRAYAHQ 281 (666)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~~~~~l~~~~l~~ 281 (666)
+.++.+ .++.||+|+..-++||||||+... -.....+...+. +...+.+.+++-+-.+
T Consensus 122 L~R~~e------------------AGVrvP~Pi~~~~nVLvMEfIg~~-g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l 182 (268)
T COG1718 122 LKRAYE------------------AGVRVPEPIAFRNNVLVMEFIGDD-GLPAPRLKDVPLELEEAEGLYEDVVEYMRRL 182 (268)
T ss_pred HHHHHH------------------cCCCCCCceeecCCeEEEEeccCC-CCCCCCcccCCcCchhHHHHHHHHHHHHHHH
Confidence 999887 369999999999999999999654 111112222222 2344455555555555
Q ss_pred hhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCCcc
Q 005995 282 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL 352 (666)
Q Consensus 282 i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~~~l~~a~~~~d~~~~~~~~~~~g~~~ 352 (666)
....|++|+|+..-|||+. ++.+++||||++...+...-.. ++.+|...+...|...|+..
T Consensus 183 ~~~a~LVHgDLSEyNiL~~---~~~p~iID~~QaV~~~hp~a~e-------~L~RDv~Ni~~fF~r~gv~~ 243 (268)
T COG1718 183 YKEAGLVHGDLSEYNILVH---DGEPYIIDVSQAVTIDHPNAFE-------FLERDVRNIARFFRRKGVEA 243 (268)
T ss_pred HHhcCcccccchhhheEEE---CCeEEEEECccccccCCCchHH-------HHHHHHHHHHHHHHHcCCCC
Confidence 5569999999999999997 4789999999999887654433 47899999999999999863
No 35
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.56 E-value=7.2e-14 Score=136.89 Aligned_cols=139 Identities=21% Similarity=0.257 Sum_probs=97.2
Q ss_pred cccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHHHH
Q 005995 126 LATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENT 205 (666)
Q Consensus 126 i~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n~ 205 (666)
||+|++|.||+|.. +|.+|+||+..+.....-..|.. .+...+.+|.+++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~-----------------------------~~~~~~~~E~~~l 51 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDER-----------------------------IRRERTRNEARLL 51 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHH-----------------------------HHHHHHHHHHHHH
Confidence 79999999999985 78999999865532111000100 0011255677788
Q ss_pred HHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHHHHhh
Q 005995 206 RIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (666)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l~~i~ 283 (666)
..+++ .++.+|.++. ....++||||++|.+|.+.... .. ..++..+.. .+..+|
T Consensus 52 ~~l~~------------------~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~--~~---~~~~~~i~~-~l~~lH 107 (199)
T TIGR03724 52 SRARK------------------AGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEE--GN---DELLREIGR-LVGKLH 107 (199)
T ss_pred HHHHH------------------CCCCCCEEEEEECCCCEEEEEEECCccHHHHHhh--cH---HHHHHHHHH-HHHHHH
Confidence 77765 2467788775 5566999999999998775321 11 144444443 366789
Q ss_pred hcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 284 ~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
..|++|+|+||+||+++ +++++++|||+++..++.
T Consensus 108 ~~gi~H~Dl~~~Nil~~---~~~~~liDfg~a~~~~~~ 142 (199)
T TIGR03724 108 KAGIVHGDLTTSNIIVR---DDKLYLIDFGLGKYSDEI 142 (199)
T ss_pred HCCeecCCCCcceEEEE---CCcEEEEECCCCcCCCcH
Confidence 99999999999999998 478999999998876543
No 36
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.54 E-value=9.8e-15 Score=141.37 Aligned_cols=146 Identities=19% Similarity=0.215 Sum_probs=96.3
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+-+|.|.+|.||+|+.. +|+.||||-.+.+-.+ +.+.....+|+.+.+|.
T Consensus 8 ~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k-----------------------------dGi~~talREIK~Lqel 58 (318)
T KOG0659|consen 8 EKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK-----------------------------DGINRTALREIKLLQEL 58 (318)
T ss_pred hhhcCcceEEEEEEEecCCCcEEEEEEeeccccc-----------------------------cCccHHHHHHHHHHHHc
Confidence 56999999999999964 8999999977654110 11111223444444444
Q ss_pred H--HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 203 E--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~--n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
+ |+..+.+.|.. .+...||.||++. +|..+.+-+..-+.+..+-..+...+
T Consensus 59 ~h~nIi~LiD~F~~------------------------~~~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkG 113 (318)
T KOG0659|consen 59 KHPNIIELIDVFPH------------------------KSNLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKG 113 (318)
T ss_pred cCcchhhhhhhccC------------------------CCceEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 2 44444443321 3556799999984 33333222223344555555555544
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHH
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQA 325 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~ 325 (666)
++.+|.+.++|||+||.|+|++ ++|.+++.|||+++.+....+..
T Consensus 114 l~y~H~~~IlHRDlKPnNLLis--~~g~lKiADFGLAr~f~~p~~~~ 158 (318)
T KOG0659|consen 114 LAYCHSKWILHRDLKPNNLLIS--SDGQLKIADFGLARFFGSPNRIQ 158 (318)
T ss_pred HHHHHhhhhhcccCCccceEEc--CCCcEEeecccchhccCCCCccc
Confidence 7788999999999999999999 56999999999999887554443
No 37
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.53 E-value=3.3e-14 Score=150.47 Aligned_cols=140 Identities=17% Similarity=0.141 Sum_probs=103.3
Q ss_pred ccccceeeeeEEEEecCCCE-EEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 125 PLATASIAQVHRATLVDGRQ-VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~~g~~-VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
-+|+|++|+||+|..+ |+. ||||+..+.-...-. +-+|++|+.
T Consensus 48 ~iG~G~~g~V~~~~~~-g~~~vavK~~~~~~~~~~~-----------------------------------~~~f~~E~~ 91 (362)
T KOG0192|consen 48 VLGSGSFGTVYKGKWR-GTDVVAVKIISDPDFDDES-----------------------------------RKAFRREAS 91 (362)
T ss_pred hcccCCceeEEEEEeC-CceeEEEEEecchhcChHH-----------------------------------HHHHHHHHH
Confidence 3999999999999985 666 999987653211000 224778888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcce-eeeeeeecC--CCeeEeeecCCccCCChhhH-HHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQSS--ETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vP~~~~~~--~~vLvmE~i~G~~L~~~~~~-~~~~~~~~~~~~~l~~~~- 278 (666)
.+.+++| +++ .+..+.... ...|||||++|++|.++... ....++.......+.++.
T Consensus 92 il~~l~H------------------pNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiAr 153 (362)
T KOG0192|consen 92 LLSRLRH------------------PNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIAR 153 (362)
T ss_pred HHHhCCC------------------CCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHH
Confidence 8888655 222 222222222 35899999999999998654 245677777777777765
Q ss_pred -HHHhhhcC-ccccCCCcCceEEeeCCCC-ceEEEecccccccCH
Q 005995 279 -AHQIYVDG-FFNGDPHPGNFLVSKDPPH-RPILLDFGLTKKLSS 320 (666)
Q Consensus 279 -l~~i~~~g-~~H~D~hPgNilv~~~~~~-~i~liDFG~~~~l~~ 320 (666)
+..+|..+ +||||+||.|||++. ++ .++|.|||+++....
T Consensus 154 Gm~YLH~~~~iIHrDLK~~NiLv~~--~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 154 GMEYLHSEGPIIHRDLKSDNILVDL--KGKTLKIADFGLSREKVI 196 (362)
T ss_pred HHHHHhcCCCeeecccChhhEEEcC--CCCEEEECCCccceeecc
Confidence 78899999 999999999999994 45 899999999987654
No 38
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.53 E-value=4.4e-14 Score=152.88 Aligned_cols=147 Identities=16% Similarity=0.153 Sum_probs=99.0
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|+||||-+|..+ +|+.|||||++-.-.-.-. -..|.
T Consensus 192 e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q--------------------------------------~~~Ei 233 (586)
T KOG0667|consen 192 EVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQ--------------------------------------AQIEI 233 (586)
T ss_pred EEecccccceeEEEEecCCCcEEEEEeeccChHHHHH--------------------------------------HHHHH
Confidence 68999999999999965 7999999998653221000 01244
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~ 277 (666)
+.++.+++.- .....++-+.+. .+..+||.|.+ +..|.++.+... .|++...+...+.++
T Consensus 234 ~iL~~ln~~d--------------~~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qi 298 (586)
T KOG0667|consen 234 RILELLNKHD--------------PDDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQI 298 (586)
T ss_pred HHHHHHhccC--------------CCCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 4555554310 112344555554 56679999988 557777654322 345554444433333
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHH
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~ 323 (666)
+ +..+++.|+|||||||+|||+......+|++||||.++..++..-
T Consensus 299 l~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy 346 (586)
T KOG0667|consen 299 LTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY 346 (586)
T ss_pred HHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcce
Confidence 3 667889999999999999999865556899999999998876544
No 39
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.53 E-value=1.2e-14 Score=151.69 Aligned_cols=159 Identities=17% Similarity=0.263 Sum_probs=107.3
Q ss_pred ChhccccccCccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHh
Q 005995 113 SMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (666)
Q Consensus 113 ~~~~~f~~~~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (666)
++..+|+-|.++.+|||-||.||-|..+ +|++|||||+..- +-.
T Consensus 559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKl-----------------------------------rFp 603 (888)
T KOG4236|consen 559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKL-----------------------------------RFP 603 (888)
T ss_pred hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecc-----------------------------------cCC
Confidence 4678888898999999999999999964 9999999986320 000
Q ss_pred chhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeee-eeecC-CCeeEeeecCCccCCChhhHHHcCCCHHH
Q 005995 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPE-VIQSS-ETVLILEFMDGIRLNDCESLEAFGVNKQK 269 (666)
Q Consensus 192 ~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~-~~~~~-~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ 269 (666)
..+|-.+++|.+.++.+.| |+++--+ .+.+. +.+.|||-+.|.-|.-+...+...+.. +
T Consensus 604 ~kqesqlR~EVaILq~l~H------------------PGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~e-r 664 (888)
T KOG4236|consen 604 TKQESQLRNEVAILQNLHH------------------PGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPE-R 664 (888)
T ss_pred CchHHHHHHHHHHHHhcCC------------------CCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchH-H
Confidence 1233446667776666543 4444333 23344 446899999997766554433333322 2
Q ss_pred HHH-HHHH--HHHHHhhhcCccccCCCcCceEEeeCCC-CceEEEecccccccCHH-HHHH
Q 005995 270 VVE-EITR--AYAHQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLSSS-MKQA 325 (666)
Q Consensus 270 ~~~-~l~~--~~l~~i~~~g~~H~D~hPgNilv~~~~~-~~i~liDFG~~~~l~~~-~~~~ 325 (666)
+.. .+.+ ..++.+|..||+|||+||.|||+....+ -+++|+|||.++.+.++ +|+.
T Consensus 665 ~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrs 725 (888)
T KOG4236|consen 665 ITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRS 725 (888)
T ss_pred HHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhh
Confidence 211 1222 2378888999999999999999974322 47899999999999764 3443
No 40
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.53 E-value=6.9e-15 Score=157.47 Aligned_cols=134 Identities=19% Similarity=0.188 Sum_probs=98.9
Q ss_pred cccccceeeeeEEEEe-cCCCEEEEEeeC------CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhh
Q 005995 124 TPLATASIAQVHRATL-VDGRQVVVKVQH------QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l-~~g~~VAVKv~~------p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 196 (666)
.-||.|+||+||+++. .+|+.||+||.. ++..+.+..
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~------------------------------------ 67 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLN------------------------------------ 67 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHH------------------------------------
Confidence 5799999999999997 789999999864 233322222
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHH
Q 005995 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (666)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~ 272 (666)
|.+....+.| ..|-+.|. ++.-+||.|.|+-.+|..+.+ ++..++..++..
T Consensus 68 ----EIeIHr~L~H--------------------pnIV~f~~~FEDs~nVYivLELC~~~sL~el~K-rrk~ltEpEary 122 (592)
T KOG0575|consen 68 ----EIEIHRSLKH--------------------PNIVQFYHFFEDSNNVYIVLELCHRGSLMELLK-RRKPLTEPEARY 122 (592)
T ss_pred ----HHHHHHhcCC--------------------CcEEeeeeEeecCCceEEEEEecCCccHHHHHH-hcCCCCcHHHHH
Confidence 2222222221 23333332 455689999999999988765 455677777777
Q ss_pred HHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 273 ~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
.+.+++ +..+|.+||+|||+|-||+++++ +.+++|.|||++..+..
T Consensus 123 ~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~--~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 123 FLRQIVEGLKYLHSLGIIHRDLKLGNLFLNE--NMNVKIGDFGLATQLEY 170 (592)
T ss_pred HHHHHHHHHHHHHhcCceecccchhheeecC--cCcEEecccceeeeecC
Confidence 676666 88899999999999999999994 57999999999999863
No 41
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.52 E-value=2.3e-14 Score=151.13 Aligned_cols=142 Identities=24% Similarity=0.314 Sum_probs=95.4
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH-HHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF-NSE 201 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~-~~E 201 (666)
+-||.||+++|++|+.+ +++.+||||.-... +. .| +-++| .+|
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~-------------Ii----------------ke------~KvkYV~~E 123 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDKRY-------------II----------------KE------KKVKYVTRE 123 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhHHH-------------HH----------------hh------cccchhhHH
Confidence 46999999999999965 79999999853210 10 00 01111 224
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcC-CCHHH---HHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFG-VNKQK---VVEE 273 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~---~~~~ 273 (666)
-..+.++.+ + ..|-++|. ....+.|+||++++.|-++ +.+.| ++... .+..
T Consensus 124 k~~l~~L~~-----------------h--PgivkLy~TFQD~~sLYFvLe~A~nGdll~~--i~K~Gsfde~caR~YAAe 182 (604)
T KOG0592|consen 124 KEALTQLSG-----------------H--PGIVKLYFTFQDEESLYFVLEYAPNGDLLDL--IKKYGSFDETCARFYAAE 182 (604)
T ss_pred HHHHHHhhC-----------------C--CCeEEEEEEeecccceEEEEEecCCCcHHHH--HHHhCcchHHHHHHHHHH
Confidence 344444432 2 33445553 5677999999999988776 33333 22211 1111
Q ss_pred HHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHH
Q 005995 274 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (666)
Q Consensus 274 l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~ 324 (666)
++. .++.||.+||||||+||+|||++ .||++.|.|||.++.+++....
T Consensus 183 Ild-AleylH~~GIIHRDlKPENILLd--~dmhikITDFGsAK~l~~~~~~ 230 (604)
T KOG0592|consen 183 ILD-ALEYLHSNGIIHRDLKPENILLD--KDGHIKITDFGSAKILSPSQKS 230 (604)
T ss_pred HHH-HHHHHHhcCceeccCChhheeEc--CCCcEEEeeccccccCChhhcc
Confidence 221 28889999999999999999999 5699999999999999887654
No 42
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.52 E-value=1.4e-13 Score=133.00 Aligned_cols=159 Identities=16% Similarity=0.136 Sum_probs=106.9
Q ss_pred ccccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
.+.+++++||+||.+.. +|++++.+-..-. . ..++.++ . . -+.+|+
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~-~-------~~~~~~~--------------------~----~-l~~rE~ 52 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAA-P-------WWLRGVA--------------------W----W-LARREA 52 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeecccccc-h-------hhhhhHH--------------------H----H-HHHHHH
Confidence 36799999999998875 6778876632211 0 0000000 0 0 156788
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHHHHh
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI 282 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l~~i 282 (666)
+.+.++.+ ...+|.++.....+++|||++|.+|.+... . ....+...+.+ .+.++
T Consensus 53 ~iL~~L~~-------------------~~~vP~ll~~~~~~lvmeyI~G~~L~~~~~--~---~~~~~~~qi~~-~L~~l 107 (218)
T PRK12274 53 LALRQLDG-------------------LPRTPRLLHWDGRHLDRSYLAGAAMYQRPP--R---GDLAYFRAARR-LLQQL 107 (218)
T ss_pred HHHHhcCC-------------------CCCCCEEEEEcCEEEEEeeecCccHHhhhh--h---hhHHHHHHHHH-HHHHH
Confidence 88877643 256788876566799999999998865321 1 11223333333 47789
Q ss_pred hhcCccccCC-CcCceEEeeCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 005995 283 YVDGFFNGDP-HPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAE 347 (666)
Q Consensus 283 ~~~g~~H~D~-hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~~~l~~a~~~~d~~~~~~~~~~ 347 (666)
|..|++|+|+ ||+|||++ ++|+++|||||++...++..+ ...-+..+|...+.+.+..
T Consensus 108 H~~GIvHrDL~kp~NILv~--~~g~i~LIDFG~A~~~~~~~~-----~~r~L~~rDl~~llk~~~~ 166 (218)
T PRK12274 108 HRCGVAHNDLAKEANWLVQ--EDGSPAVIDFQLAVRGNPRAR-----WMRLLAREDLRHLLKHKRM 166 (218)
T ss_pred HHCcCccCCCCCcceEEEc--CCCCEEEEECCCceecCCcch-----HHHHHHHHHHHHHHHHHHh
Confidence 9999999999 79999998 458899999999997665333 1122335899999998866
No 43
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.51 E-value=4.5e-14 Score=143.06 Aligned_cols=148 Identities=21% Similarity=0.247 Sum_probs=92.7
Q ss_pred ccccccCccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchh
Q 005995 116 GMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 194 (666)
Q Consensus 116 ~~f~~~~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 194 (666)
+.|..++. +|.|++|.||+|+.+ +|+.||+|.++-..++. ..|. .
T Consensus 11 ~~~~~~ek--lGeGtyg~Vykar~~~~g~~VALKkirl~~~~E-----------------G~P~------------t--- 56 (323)
T KOG0594|consen 11 FDYEKVEK--LGEGTYGVVYKARSKRTGKFVALKKIRLEFEEE-----------------GVPS------------T--- 56 (323)
T ss_pred HHHHHHHH--hCCCCceEEEEEEEecCCCEEEEEEEecccccc-----------------CCCc------------h---
Confidence 34555554 999999999999965 89999999886432210 0010 0
Q ss_pred hhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cC------CCeeEeeecCCccCCChhhHHH---cC
Q 005995 195 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS------ETVLILEFMDGIRLNDCESLEA---FG 264 (666)
Q Consensus 195 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~------~~vLvmE~i~G~~L~~~~~~~~---~~ 264 (666)
-.+|..-++++++. .+ -+.+-.+.. .+ ..+||+||++- +|.++..... .+
T Consensus 57 ---aiREisllk~L~~~---------------~~-iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g 116 (323)
T KOG0594|consen 57 ---AIREISLLKRLSHA---------------NH-IVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQG 116 (323)
T ss_pred ---hhHHHHHHHHhCCC---------------cc-eEEEEeeeeecccccccceEEEEEEeecc-cHHHHHHhccccccC
Confidence 12233344444331 01 122223332 22 45699999974 3444432222 35
Q ss_pred CCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 265 ~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.+...+-..+.+++ +..+|.+|++|||+||.||||+ ++|.++|+|||+++.+.
T Consensus 117 ~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~--~~G~lKlaDFGlAra~~ 171 (323)
T KOG0594|consen 117 LPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLIS--SSGVLKLADFGLARAFS 171 (323)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEEC--CCCcEeeeccchHHHhc
Confidence 55533444444443 7778999999999999999999 46999999999999665
No 44
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.50 E-value=6.3e-14 Score=150.75 Aligned_cols=141 Identities=16% Similarity=0.205 Sum_probs=94.6
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+.+..... ..+ ... .+..|.
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~--------------------------~~~------~~~~E~ 52 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADML--EKE--------------------------QVG------HIRAER 52 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHH--Hhh--------------------------HHH------HHHHHH
Confidence 57999999999999865 7899999987532100 000 000 123343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++.+ ..|++.+. ....+|||||++|++|.+... ....++...+...+.+++
T Consensus 53 ~il~~~~~--------------------~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~ 111 (363)
T cd05628 53 DILVEADS--------------------LWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLM-KKDTLTEEETQFYIAETV 111 (363)
T ss_pred HHHHhCCC--------------------CCcceEEEEEecCCeEEEEEcCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 33333221 23444432 345689999999999877643 223455555554444443
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+..+|..|++|||+||.|||++ .++.++|+|||+++.+...
T Consensus 112 ~aL~~lH~~givHrDlKp~NILi~--~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 112 LAIDSIHQLGFIHRDIKPDNLLLD--SKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred HHHHHHHhCCeEecCCCHHHeEEC--CCCCEEEeeccCccccccc
Confidence 7889999999999999999998 4589999999999877543
No 45
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.50 E-value=8.5e-14 Score=141.04 Aligned_cols=138 Identities=18% Similarity=0.206 Sum_probs=97.1
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||+|++|.||+|...+++.||+|+.+........ .++.+|..
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~------------------------------------~~~~~e~~ 44 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELK------------------------------------IKFLSEAR 44 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHH------------------------------------HHHHHHHH
Confidence 368999999999999888999999987765432211 12445665
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+.++.+ + .+++++ . ....++||||++|.+|.+.........+...+...+.++.
T Consensus 45 ~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~ 104 (250)
T cd05085 45 ILKQYDH------------------P--NIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAA 104 (250)
T ss_pred HHHhCCC------------------C--CcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 5555422 2 233332 2 4567899999999998876432223345555555555543
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|+||+||+++ .++.++|+|||++....
T Consensus 105 ~l~~lH~~~~~H~dl~p~nili~--~~~~~~l~d~g~~~~~~ 144 (250)
T cd05085 105 GMAYLESKNCIHRDLAARNCLVG--ENNVLKISDFGMSRQED 144 (250)
T ss_pred HHHHHHhCCeeecccChheEEEc--CCCeEEECCCccceecc
Confidence 6788999999999999999998 45889999999986543
No 46
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.50 E-value=6.6e-14 Score=148.69 Aligned_cols=140 Identities=16% Similarity=0.213 Sum_probs=93.6
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+.. +|+.||||+.+....... . ..-.+..|.
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----~------------------------------~~~~~~~e~ 52 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKL----N------------------------------EVRHVLTER 52 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhh----h------------------------------HHHHHHHHH
Confidence 57999999999999976 689999999764321100 0 001133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+..+.+ ..|++++. ....+|||||++|++|.++... ...++...+...+.+++
T Consensus 53 ~~l~~~~h--------------------~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~qi~ 111 (333)
T cd05600 53 DILTTTKS--------------------EWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNN-LGVLSEDHARFYMAEMF 111 (333)
T ss_pred HHHHhCCC--------------------CCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 44443322 22333332 3456899999999999877431 22344444444444433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|+||.||+++ .++.++|+|||++.....
T Consensus 112 ~~l~~lH~~~ivH~dlkp~Nil~~--~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 112 EAVDALHELGYIHRDLKPENFLID--ASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred HHHHHHHHCCccccCCCHHHEEEC--CCCCEEEEeCcCCccccc
Confidence 7789999999999999999998 458999999999886643
No 47
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.50 E-value=9.9e-14 Score=140.81 Aligned_cols=138 Identities=17% Similarity=0.202 Sum_probs=94.6
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+.+ +|+.||||+.+........ -++.+|.
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------------~~~~~e~ 44 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLK------------------------------------AKFLQEA 44 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHH------------------------------------HHHHHHH
Confidence 36899999999999975 7999999986543322111 1133454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++.+ ..+++++. ....++||||++|.+|.++........+...+...+.++.
T Consensus 45 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~ 104 (252)
T cd05084 45 RILKQYSH--------------------PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAA 104 (252)
T ss_pred HHHHhCCC--------------------CCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 44444322 22333332 4556899999999998876432222345555554444443
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|+||+||+++ +++.++|+|||++..+.
T Consensus 105 ~~L~~lH~~~i~H~dl~p~nil~~--~~~~~kl~dfg~~~~~~ 145 (252)
T cd05084 105 AGMEYLESKHCIHRDLAARNCLVT--EKNVLKISDFGMSREEE 145 (252)
T ss_pred HHHHHHHhCCccccccchheEEEc--CCCcEEECccccCcccc
Confidence 6788999999999999999998 45889999999987654
No 48
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.50 E-value=4.1e-14 Score=141.07 Aligned_cols=143 Identities=15% Similarity=0.132 Sum_probs=96.3
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+-|++|+||.||||+.+ +++-||+|-.+++-++. ++.+ -..+|.
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~--------------------GFPI---------------tsLREI 126 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE--------------------GFPI---------------TSLREI 126 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeecccccccC--------------------CCcc---------------hhHHHH
Confidence 45999999999999975 78999999877654311 1111 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-c--CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
..+.+++| ..-|.|-+|.. + .+-+||||||+- .|..+...-...+...++-....+.+
T Consensus 127 niLl~~~H-----------------~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~ 188 (419)
T KOG0663|consen 127 NILLKARH-----------------PNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLR 188 (419)
T ss_pred HHHHhcCC-----------------CCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHH
Confidence 45555443 12345556554 2 456899999984 23333221122344444444455544
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
++++|.+.++|||+||+|+|+++ .|.+++.|||+++.+...
T Consensus 189 glk~lH~~wilHRDLK~SNLLm~~--~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 189 GLKHLHDNWILHRDLKTSNLLLSH--KGILKIADFGLAREYGSP 230 (419)
T ss_pred HHHHHhhceeEecccchhheeecc--CCcEEecccchhhhhcCC
Confidence 88899999999999999999994 589999999999998765
No 49
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.49 E-value=8.9e-14 Score=147.06 Aligned_cols=137 Identities=13% Similarity=0.096 Sum_probs=90.8
Q ss_pred ccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
.||+|++|.||+|+.. +|+.||||+.++..... .+ ....+.+|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~~--------------------------------~~~~~~~e~~ 47 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA--KD--------------------------------EVAHTLTESR 47 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh--hH--------------------------------HHHHHHHHHH
Confidence 5899999999999875 79999999986421100 00 0001233544
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+.++.+ + .|.+++ . ....+|||||++|++|.+... ....++...+...+.+++
T Consensus 48 ~l~~l~h------------------p--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~ 106 (323)
T cd05571 48 VLQNTRH------------------P--FLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVS 106 (323)
T ss_pred HHHhCCC------------------C--CCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 4444332 1 222222 2 455689999999998866532 222344444444444443
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|+||.|||++ .++.++|+|||+++..
T Consensus 107 ~L~~lH~~~ivHrDlkp~NIll~--~~~~~kl~DfG~a~~~ 145 (323)
T cd05571 107 ALGYLHSCDVVYRDLKLENLMLD--KDGHIKITDFGLCKEG 145 (323)
T ss_pred HHHHHHhCCeEeCCCCHHHEEEC--CCCCEEEeeCCCCccc
Confidence 7889999999999999999998 4589999999998753
No 50
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.49 E-value=2.2e-13 Score=133.88 Aligned_cols=181 Identities=18% Similarity=0.206 Sum_probs=128.0
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
++||-|.-+-||.|...+|.+||||+.|-|.. .+.. +-+.-..........+ +.. .-+.-.+|.+
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~Grt-sFrk-------vk~~R~y~~~~~h~sW-l~~------sRl~A~rEf~ 161 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRT-SFRK-------VKRNRDYLADKEHGSW-LYV------SRLAAEREFE 161 (304)
T ss_pred cccccCccceEEEEECCCCCEEEEEEeecCch-hhhh-------hcchhhhhccccCcch-hhh------HHHHHHHHHH
Confidence 68999999999999999999999999988733 2221 1100000000000111 000 1112345666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHHHHhh
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l~~i~ 283 (666)
.+.++.. .++.||+|+.-+++++|||+++|..|....- ..-+...+...+++.+-. +.
T Consensus 162 ~L~~L~~------------------~G~~VP~P~~~nRHaVvMe~ieG~eL~~~r~---~~en~~~il~~il~~~~~-~~ 219 (304)
T COG0478 162 ALQRLYP------------------EGVKVPKPIAWNRHAVVMEYIEGVELYRLRL---DVENPDEILDKILEEVRK-AY 219 (304)
T ss_pred HHHHhhh------------------cCCCCCCccccccceeeeehcccceeecccC---cccCHHHHHHHHHHHHHH-HH
Confidence 6666643 3689999999999999999999999887631 223566777777776543 34
Q ss_pred hcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCC
Q 005995 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGL 350 (666)
Q Consensus 284 ~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~~~l~~a~~~~d~~~~~~~~~~~g~ 350 (666)
+.|++|+|+.+-||+|+ +||.+++|||-++...+...-..+ +++|.+.+++.|.+-..
T Consensus 220 ~~GiVHGDlSefNIlV~--~dg~~~vIDwPQ~v~~~hp~a~e~-------l~RDv~nii~yFrrky~ 277 (304)
T COG0478 220 RRGIVHGDLSEFNILVT--EDGDIVVIDWPQAVPISHPDAEEL-------LERDVENIIKYFRRKYG 277 (304)
T ss_pred HcCccccCCchheEEEe--cCCCEEEEeCcccccCCCCCHHHH-------HHhHHHHHHHHHHHhcc
Confidence 89999999999999999 458999999999998887766554 68999999999987543
No 51
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.49 E-value=9.4e-14 Score=149.21 Aligned_cols=140 Identities=16% Similarity=0.209 Sum_probs=93.6
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+.. +|+.||||+.+..-. ...+ ... .+..|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~--------------------------~~~------~~~~e~ 52 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADM--LEKE--------------------------QVA------HIRAER 52 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHH--hhhh--------------------------hHH------HHHHHH
Confidence 57999999999999975 789999998864210 0000 000 123343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+..+.+ ..+++.+. ....+|||||++|++|.+... ....++...+...+.+++
T Consensus 53 ~~l~~l~~--------------------~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~ 111 (360)
T cd05627 53 DILVEADG--------------------AWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLM-KKDTLSEEATQFYIAETV 111 (360)
T ss_pred HHHHhCCC--------------------CCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 33333221 23344432 345689999999999887643 223345444444444433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|||+||+|||++ .++.++|+|||++..+..
T Consensus 112 ~~L~~lH~~givHrDLkp~NIli~--~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 112 LAIDAIHQLGFIHRDIKPDNLLLD--AKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred HHHHHHHHCCeEccCCCHHHEEEC--CCCCEEEeeccCCccccc
Confidence 7889999999999999999998 468999999999887654
No 52
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.49 E-value=1e-13 Score=150.03 Aligned_cols=139 Identities=14% Similarity=0.127 Sum_probs=91.5
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+.. +|+.||||+.+..-. ... + ..-.+.+|.
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~--~~~--------------------------~------~~~~~~~E~ 52 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV--LNR--------------------------N------QVAHVKAER 52 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh--hhh--------------------------H------HHHHHHHHH
Confidence 46999999999999865 789999998753210 000 0 001133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHH-
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA- 277 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~- 277 (666)
..+.++.+ ..|++++. ....++||||++|++|.++.. ....++...+...+.++
T Consensus 53 ~il~~l~h--------------------~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~e~~~~~~~~qi~ 111 (381)
T cd05626 53 DILAEADN--------------------EWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLI-RMEVFPEVLARFYIAELT 111 (381)
T ss_pred HHHHhcCC--------------------CCeeeeEEEEecCCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 44444322 23444443 455689999999999877632 11223433333333333
Q ss_pred -HHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 278 -YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 278 -~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.+..+|..|++|||+||.|||++ .+++++|+|||++..+.
T Consensus 112 ~aL~~LH~~givHrDlKp~Nili~--~~~~~kL~DFGl~~~~~ 152 (381)
T cd05626 112 LAIESVHKMGFIHRDIKPDNILID--LDGHIKLTDFGLCTGFR 152 (381)
T ss_pred HHHHHHHhCCeeecCCcHHHEEEC--CCCCEEEeeCcCCcccc
Confidence 27889999999999999999998 45899999999987654
No 53
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.48 E-value=1e-13 Score=146.96 Aligned_cols=137 Identities=13% Similarity=0.118 Sum_probs=91.3
Q ss_pred ccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
.||+|++|+||+|+.. +|+.||||+.++..... .+ ....+.+|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~--~~--------------------------------~~~~~~~E~~ 47 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIA--KD--------------------------------EVAHTLTESR 47 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--hh--------------------------------HHHHHHHHHH
Confidence 5899999999999865 79999999986532100 00 0011334554
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+..+.+ + .|++++ . ....+|||||++|++|.+... ....++...+...+.+++
T Consensus 48 ~l~~l~h------------------p--~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~~ 106 (328)
T cd05593 48 VLKNTRH------------------P--FLTSLKYSFQTKDRLCFVMEYVNGGELFFHLS-RERVFSEDRTRFYGAEIVS 106 (328)
T ss_pred HHHhCCC------------------C--CCcceEEEEEcCCEEEEEEeCCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHH
Confidence 4444322 1 222222 2 445689999999998865532 122344444444444433
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|+||.|||++ .++.++|+|||+++..
T Consensus 107 aL~~LH~~~ivHrDikp~NIll~--~~~~~kL~DfG~~~~~ 145 (328)
T cd05593 107 ALDYLHSGKIVYRDLKLENLMLD--KDGHIKITDFGLCKEG 145 (328)
T ss_pred HHHHHHhCCeEecccCHHHeEEC--CCCcEEEecCcCCccC
Confidence 7889999999999999999998 4589999999998753
No 54
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.48 E-value=1.1e-13 Score=140.56 Aligned_cols=142 Identities=18% Similarity=0.240 Sum_probs=94.2
Q ss_pred cccC-ccccccceeeeeEEEEec-CCCEEEEEeeCCCh-HHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhh
Q 005995 119 MDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (666)
Q Consensus 119 ~~~~-~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~-~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 195 (666)
++|+ -+.||.||||+|+..+.+ +|+-.|+||.+... .+. .+. +.
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~--~e~---------------------------~~---- 71 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEK--KEV---------------------------RH---- 71 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhh--hhH---------------------------HH----
Confidence 4454 368999999999999966 68999999875321 000 000 00
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---cCCCeeEeeecCCccCCChhhHHHcC-CCHHHHH
Q 005995 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVV 271 (666)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---~~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~~~ 271 (666)
...|...+.+++ .++.|.-.|. .++.+||+||+.|+.|--. +++.+ ++...+.
T Consensus 72 --~~~Er~IL~~v~-------------------hPFiv~l~ysFQt~~kLylVld~~~GGeLf~h--L~~eg~F~E~~ar 128 (357)
T KOG0598|consen 72 --TKAERNILSKIK-------------------HPFIVKLIYSFQTEEKLYLVLDYLNGGELFYH--LQREGRFSEDRAR 128 (357)
T ss_pred --HHHHHHHHHhCC-------------------CCcEeeeEEecccCCeEEEEEeccCCccHHHH--HHhcCCcchhHHH
Confidence 122333333332 2455666664 4667999999999887643 33322 3333222
Q ss_pred HHHHH--HHHHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 272 EEITR--AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 272 ~~l~~--~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
--+++ ..+.++|+.||+|||+||.|||++ .+|.++|.|||+++.-
T Consensus 129 fYlaEi~lAL~~LH~~gIiyRDlKPENILLd--~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 129 FYLAEIVLALGYLHSKGIIYRDLKPENILLD--EQGHIKLTDFGLCKED 175 (357)
T ss_pred HHHHHHHHHHHHHHhCCeeeccCCHHHeeec--CCCcEEEeccccchhc
Confidence 23333 338899999999999999999999 4699999999999853
No 55
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.48 E-value=1.9e-13 Score=145.91 Aligned_cols=145 Identities=17% Similarity=0.202 Sum_probs=95.1
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
..||+|+||.|+.|... +|+.||||+........ .. ....+. ..+|.
T Consensus 23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~--------------------~~------~~~~~~------i~rEi 70 (370)
T KOG0583|consen 23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSS--------------------KS------QKLDEL------IKREI 70 (370)
T ss_pred eeecCCCCeeEEEeeeccCCCeEEEEEechhcccc--------------------cc------cccchh------hHHHH
Confidence 68999999999999864 89999999865430000 00 000001 11455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCc-ceeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEV-DVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
.++.++++ ++ -+.+-+++. .+..++||||+.|+.|.+...- ...+..........+++
T Consensus 71 ~~~~~~~~-----------------HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisa 132 (370)
T KOG0583|consen 71 SILRRLRS-----------------HPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISA 132 (370)
T ss_pred HHHHHhcc-----------------CCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHH
Confidence 66666652 12 233344444 5667999999999888776432 23333323222222322
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+.++|..|++|||+||+|||++.+. +.++|+|||++....
T Consensus 133 v~y~H~~gi~HRDLK~ENilld~~~-~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 133 VAYCHSRGIVHRDLKPENILLDGNE-GNLKLSDFGLSAISP 172 (370)
T ss_pred HHHHHhCCEeeCCCCHHHEEecCCC-CCEEEeccccccccC
Confidence 7788999999999999999999432 899999999998773
No 56
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.48 E-value=1.6e-13 Score=143.67 Aligned_cols=138 Identities=19% Similarity=0.215 Sum_probs=92.4
Q ss_pred cccccceeeeeEEEEecC-----------------CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHH
Q 005995 124 TPLATASIAQVHRATLVD-----------------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIID 186 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~-----------------g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~ 186 (666)
+.||+|++|.||+|+..+ +..||||+.+++......
T Consensus 11 ~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------------- 63 (304)
T cd05096 11 EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNAR--------------------------- 63 (304)
T ss_pred eEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHH---------------------------
Confidence 579999999999997532 347999998875432111
Q ss_pred HHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH
Q 005995 187 EWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA 262 (666)
Q Consensus 187 e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~ 262 (666)
.+|.+|.+.+.++++ ..|.+++. ....+|+|||++|++|.++.....
T Consensus 64 ---------~~~~~E~~~l~~l~h--------------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~ 114 (304)
T cd05096 64 ---------NDFLKEVKILSRLKD--------------------PNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHH 114 (304)
T ss_pred ---------HHHHHHHHHHhhcCC--------------------CCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhcc
Confidence 124456555555432 22334432 455789999999999987643211
Q ss_pred c------------------CCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 263 F------------------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 263 ~------------------~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
. .+....+...+.++. +..+|..|++|+|+||.|||++ .++.++|+|||+++.+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~--~~~~~kl~DfG~~~~~~ 189 (304)
T cd05096 115 LDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVG--ENLTIKIADFGMSRNLY 189 (304)
T ss_pred ccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEc--CCccEEECCCccceecc
Confidence 0 112223333333333 7788999999999999999998 45889999999987653
No 57
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.48 E-value=3.7e-14 Score=150.07 Aligned_cols=178 Identities=19% Similarity=0.213 Sum_probs=118.3
Q ss_pred hCCChhccccccCccccccceeeeeEEEEec-CCCEEEEEeeC-CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHH
Q 005995 110 FGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQH-QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDE 187 (666)
Q Consensus 110 ~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~-p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e 187 (666)
+..+++.+|.+.-+ ||-||||-||.|+.. +.+.||||-.. .|- .....
T Consensus 20 ~k~DPEklf~dLrE--IGHGSFGAVYfArd~~n~evVAIKKMsySGK-Qs~EK--------------------------- 69 (948)
T KOG0577|consen 20 FKDDPEKLFSDLRE--IGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEK--------------------------- 69 (948)
T ss_pred ccCCHHHHHHHHHH--hcCCccceeEEeeccCccceeeeeecccccc-ccHHH---------------------------
Confidence 45678888876654 999999999999964 78899999542 221 11111
Q ss_pred HHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCC
Q 005995 188 WCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVN 266 (666)
Q Consensus 188 ~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~ 266 (666)
|. |...|.+.+.+++|- ..+-.-..|. ....+||||||-| +-.|+......++.
T Consensus 70 Wq-------DIlKEVrFL~~l~HP-----------------ntieYkgCyLre~TaWLVMEYClG-SAsDlleVhkKplq 124 (948)
T KOG0577|consen 70 WQ-------DILKEVRFLRQLRHP-----------------NTIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQ 124 (948)
T ss_pred HH-------HHHHHHHHHHhccCC-----------------CcccccceeeccchHHHHHHHHhc-cHHHHHHHHhccch
Confidence 11 122344444444331 0111112222 4556999999988 55677666777777
Q ss_pred HHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHH------HHHHHHHHHHcCCH
Q 005995 267 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ------ALAKMFFAAAEGDH 338 (666)
Q Consensus 267 ~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~------~~~~l~~a~~~~d~ 338 (666)
..+++.....++ +..+|.++.||||+|.||||++ .+|.++|.|||.+...++...- .--.+++|.-++.|
T Consensus 125 EvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs--e~g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqY 202 (948)
T KOG0577|consen 125 EVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS--EPGLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQY 202 (948)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec--CCCeeeeccccchhhcCchhcccCCccccchhHheecccccc
Confidence 777777766665 8899999999999999999999 4589999999998877654211 11255666666666
Q ss_pred HHHHHH
Q 005995 339 VALLSA 344 (666)
Q Consensus 339 ~~~~~~ 344 (666)
++=++.
T Consensus 203 dgkvDv 208 (948)
T KOG0577|consen 203 DGKVDV 208 (948)
T ss_pred CCccce
Confidence 655544
No 58
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.47 E-value=1.2e-13 Score=145.96 Aligned_cols=138 Identities=18% Similarity=0.180 Sum_probs=89.7
Q ss_pred ccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
.||+|++|+||+|+.+ +|+.||||+.++..... +-. +. .+..|.+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~---------------------~~----------~~~~e~~ 47 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ---DDD---------------------VE----------CTMTEKR 47 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh---ccH---------------------HH----------HHHHHHH
Confidence 5899999999999976 68999999876532100 000 00 0122322
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+....+ +..|++++. ....++||||++|++|.+... ....++...+...+.+++
T Consensus 48 ~l~~~~~-------------------h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~-~~~~l~~~~~~~~~~ql~~ 107 (320)
T cd05590 48 ILSLARN-------------------HPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQ-KSRRFDEARARFYAAEITS 107 (320)
T ss_pred HHHhccC-------------------CCchhceeeEEEcCCEEEEEEcCCCCchHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 2222110 122333332 345689999999998876532 223345555444444443
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|+||+|||++ .++.++|+|||++...
T Consensus 108 ~L~~lH~~~ivH~dlkp~NIli~--~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 108 ALMFLHDKGIIYRDLKLDNVLLD--HEGHCKLADFGMCKEG 146 (320)
T ss_pred HHHHHHHCCeEeCCCCHHHeEEC--CCCcEEEeeCCCCeec
Confidence 7889999999999999999998 4589999999998753
No 59
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.47 E-value=1.2e-13 Score=146.36 Aligned_cols=140 Identities=19% Similarity=0.161 Sum_probs=93.8
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.+ +|+.||||+.+..-.. +.. ..-.+.+|.
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~------------------------------~~~~~~~E~ 69 (329)
T PTZ00263 24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL----KMK------------------------------QVQHVAQEK 69 (329)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh----hhh------------------------------hHHHHHHHH
Confidence 67999999999999976 7899999987542100 000 000134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++.+ ..|++++. ....++||||++|++|.+.... ...+....+...+.+++
T Consensus 70 ~~l~~l~h--------------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~ 128 (329)
T PTZ00263 70 SILMELSH--------------------PFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRK-AGRFPNDVAKFYHAELV 128 (329)
T ss_pred HHHHhCCC--------------------CCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 55555432 12333332 4556899999999988765321 22233333333333332
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|+||.|||++ .++.++|+|||++..++.
T Consensus 129 ~aL~~LH~~~ivH~dlkp~NIll~--~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 129 LAFEYLHSKDIIYRDLKPENLLLD--NKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred HHHHHHHHCCeeecCCCHHHEEEC--CCCCEEEeeccCceEcCC
Confidence 7889999999999999999998 458999999999987754
No 60
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.47 E-value=1.6e-13 Score=145.22 Aligned_cols=138 Identities=13% Similarity=0.124 Sum_probs=90.8
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+.+++.... ..+. -.+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~---------------------------------~~~~~e~ 51 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ-DDDV---------------------------------ECTMVEK 51 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH---------------------------------HHHHHHH
Confidence 56999999999999976 67899999986532100 0000 0122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+..+.+ +-.++.++. ....++||||++|++|.+... ....+....+...+.+++
T Consensus 52 ~~l~~~~~-------------------~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~-~~~~~~~~~~~~~~~qi~ 111 (324)
T cd05587 52 RVLALPGK-------------------PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGKFKEPHAVFYAAEIA 111 (324)
T ss_pred HHHHhcCC-------------------CCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 44333321 122333332 345689999999998876532 122344444444444443
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
+..+|..|++|+|+||.|||++ .++.++|+|||++..
T Consensus 112 ~al~~lH~~~ivH~dlkp~Nill~--~~~~~kL~Dfg~~~~ 150 (324)
T cd05587 112 IGLFFLHSKGIIYRDLKLDNVMLD--AEGHIKIADFGMCKE 150 (324)
T ss_pred HHHHHHHHCCeEecCCCHHHeEEc--CCCCEEEeecCccee
Confidence 7789999999999999999998 458999999999864
No 61
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.47 E-value=1.5e-13 Score=148.54 Aligned_cols=137 Identities=14% Similarity=0.190 Sum_probs=90.7
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+.+..-. .. .+ ..-.+.+|.
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~---~~-------------------------~~------~~~~~~~E~ 52 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADV---LM-------------------------RN------QAAHVKAER 52 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHH---Hh-------------------------hh------hHHHHHHHH
Confidence 57999999999999965 789999998753210 00 00 001133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcC-CCHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITRA 277 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~~~~~l~~~ 277 (666)
+.+.++.+ ..|++++. ....++||||++|++|.++.. ..+ ++...+...+.++
T Consensus 53 ~il~~l~h--------------------~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi 110 (376)
T cd05598 53 DILAEADN--------------------EWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLI--RLGIFEEDLARFYIAEL 110 (376)
T ss_pred HHHHhCCC--------------------CCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHH
Confidence 44444322 22333332 455689999999999987642 222 3333333333333
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+ +..+|..|++|||+||+|||++ .++.++|+|||++..+
T Consensus 111 ~~al~~lH~~~ivHrDlkp~Nill~--~~~~ikL~DFG~a~~~ 151 (376)
T cd05598 111 TCAIESVHKMGFIHRDIKPDNILID--RDGHIKLTDFGLCTGF 151 (376)
T ss_pred HHHHHHHHHCCeEeCCCCHHHEEEC--CCCCEEEEeCCCCccc
Confidence 3 7789999999999999999998 4589999999998655
No 62
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.47 E-value=1.1e-13 Score=146.38 Aligned_cols=137 Identities=13% Similarity=0.105 Sum_probs=91.4
Q ss_pred ccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
.||+|++|.||+|+.. +|+.||+|+.+...... ..+ ...+.+|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~---------------------------------~~~~~~E~~ 47 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA-KDE---------------------------------VAHTVTESR 47 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hHH---------------------------------HHHHHHHHH
Confidence 5899999999999965 79999999986532100 000 001233554
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+..+.+ ..+++++ . ....+|||||++|++|.+... ....++...+...+.+++
T Consensus 48 ~l~~l~h--------------------p~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~ 106 (323)
T cd05595 48 VLQNTRH--------------------PFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVS 106 (323)
T ss_pred HHHhCCC--------------------CCCcceeeEEecCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 4444432 1233332 2 345689999999999865532 222345555544444443
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|+||.|||++ .++.++|+|||++...
T Consensus 107 aL~~LH~~~ivH~Dlkp~NIll~--~~~~~kL~Dfg~~~~~ 145 (323)
T cd05595 107 ALEYLHSRDVVYRDIKLENLMLD--KDGHIKITDFGLCKEG 145 (323)
T ss_pred HHHHHHHCCeEecCCCHHHEEEc--CCCCEEecccHHhccc
Confidence 7889999999999999999998 4589999999987653
No 63
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.47 E-value=2.1e-13 Score=141.39 Aligned_cols=143 Identities=15% Similarity=0.126 Sum_probs=95.2
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|... +|+.||||+.......... .+..+.+|.
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~----------------------------------~~~~~~~E~ 51 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK----------------------------------GEAMALNEK 51 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhh----------------------------------hHHHHHHHH
Confidence 46999999999999864 8999999986543211000 111234465
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cCCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~l~~~~-- 278 (666)
+.+.++.+. .-+.+...+. ....++||||++|++|.+..... ...++...+...+.+++
T Consensus 52 ~il~~l~~~-----------------~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~ 114 (285)
T cd05631 52 RILEKVNSR-----------------FVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCG 114 (285)
T ss_pred HHHHhcCCC-----------------cEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHH
Confidence 555554321 1122222222 34568999999999987653221 12345555555444443
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|+||.|||++ .++.++|+|||++..++
T Consensus 115 l~~lH~~~iiH~dikp~Nill~--~~~~~kl~Dfg~~~~~~ 153 (285)
T cd05631 115 LEDLQRERIVYRDLKPENILLD--DRGHIRISDLGLAVQIP 153 (285)
T ss_pred HHHHHhCCEEeCCCCHHHEEEC--CCCCEEEeeCCCcEEcC
Confidence 7788999999999999999998 45889999999988764
No 64
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.47 E-value=1.8e-13 Score=144.89 Aligned_cols=137 Identities=13% Similarity=0.099 Sum_probs=90.6
Q ss_pred ccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
.||+|++|+||+|+.. +|+.||||+.++.....- . ....+..|.+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~-~---------------------------------~~~~~~~e~~ 47 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK-D---------------------------------EVAHTLTENR 47 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh-h---------------------------------HHHHHHHHHH
Confidence 5899999999999864 799999999864321000 0 0001233444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+..+.+ ..|+.++ . ....+|||||++|++|.+... ....++...+...+.+++
T Consensus 48 ~l~~~~h--------------------p~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~ 106 (325)
T cd05594 48 VLQNSRH--------------------PFLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVS 106 (325)
T ss_pred HHHhCCC--------------------CCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHH
Confidence 4443322 1233333 2 445689999999998865532 222345555554444444
Q ss_pred -HHHhhh-cCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 -AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 -l~~i~~-~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|. .|++|+|+||.|||++ .++.++|+|||++...
T Consensus 107 aL~~lH~~~~ivHrDikp~NIll~--~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 107 ALDYLHSEKNVVYRDLKLENLMLD--KDGHIKITDFGLCKEG 146 (325)
T ss_pred HHHHHHhcCCEEecCCCCCeEEEC--CCCCEEEecCCCCeec
Confidence 778896 7999999999999998 4589999999998753
No 65
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.47 E-value=1.5e-13 Score=145.73 Aligned_cols=141 Identities=17% Similarity=0.222 Sum_probs=93.9
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+.+...... .+ .+-.+..|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~~--------------------------------~~~~~~~e~ 52 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA--QE--------------------------------TVSFFEEER 52 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh--hh--------------------------------HHHHHHHHH
Confidence 57999999999999975 79999999876431100 00 000122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+..+.+ ..++.++. ....+|||||++|++|.++.......++...+...+.+++
T Consensus 53 ~i~~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~ 112 (330)
T cd05601 53 DILSISNS--------------------PWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELV 112 (330)
T ss_pred HHHHhCCC--------------------CCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 33332211 22333332 3456899999999999877543223455554444444433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|+||.|||++ .++.++|+|||++..+..
T Consensus 113 ~aL~~lH~~~i~H~Dlkp~NIll~--~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 113 LAIHSVHQMGYVHRDIKPENVLID--RTGHIKLADFGSAARLTA 154 (330)
T ss_pred HHHHHHHHCCeEcccCchHheEEC--CCCCEEeccCCCCeECCC
Confidence 7889999999999999999998 458999999999987653
No 66
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.47 E-value=1.8e-13 Score=144.58 Aligned_cols=138 Identities=15% Similarity=0.124 Sum_probs=89.3
Q ss_pred ccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
.||+|++|+||+|+.+ +|+.||||+.+.+.... ..+. -.+..|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~---------------------------------~~~~~e~~ 47 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ-DDDV---------------------------------DCTMTEKR 47 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh-hhHH---------------------------------HHHHHHHH
Confidence 4899999999999975 68999999976532100 0000 00122333
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+.... .+ ..|+.++. ....+|||||++|++|.+... ....++...+...+.+++
T Consensus 48 il~~~~-----------------~h--p~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~ 107 (321)
T cd05591 48 ILALAA-----------------KH--PFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQ-RSRKFDEPRSRFYAAEVTL 107 (321)
T ss_pred HHHhcc-----------------CC--CCccceeeEEEcCCeEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 322211 11 23344432 345689999999998865532 222344444444444433
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|+||.|||++ .++.++|+|||++...
T Consensus 108 aL~~LH~~~ivHrDikp~Nill~--~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 108 ALMFLHRHGVIYRDLKLDNILLD--AEGHCKLADFGMCKEG 146 (321)
T ss_pred HHHHHHHCCeeccCCCHHHeEEC--CCCCEEEeecccceec
Confidence 7889999999999999999998 4589999999998753
No 67
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.47 E-value=4.9e-14 Score=142.75 Aligned_cols=140 Identities=20% Similarity=0.185 Sum_probs=87.9
Q ss_pred CccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHH
Q 005995 122 VETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (666)
Q Consensus 122 ~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 200 (666)
+.+-+|+||||.||+|.+. ++++||||-..|+-+-. . +
T Consensus 28 ~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-n----------------------------------r------ 66 (364)
T KOG0658|consen 28 AVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-N----------------------------------R------ 66 (364)
T ss_pred eeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-c----------------------------------H------
Confidence 3568999999999999976 67999999655543210 1 1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee-e---cCCC---eeEeeecCCccCCChhhHH---HcCCC---H
Q 005995 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI-Q---SSET---VLILEFMDGIRLNDCESLE---AFGVN---K 267 (666)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~-~---~~~~---vLvmE~i~G~~L~~~~~~~---~~~~~---~ 267 (666)
|...+.++ +|++++--..+ . .++. -|||||++- +|.+....- ...++ .
T Consensus 67 El~im~~l------------------~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~i 127 (364)
T KOG0658|consen 67 ELQIMRKL------------------DHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEI 127 (364)
T ss_pred HHHHHHhc------------------CCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeee
Confidence 22222222 23333322222 1 1212 489999964 555543210 12222 2
Q ss_pred HHHHHHHHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHH
Q 005995 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (666)
Q Consensus 268 ~~~~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~ 323 (666)
+-...++.+. +..+|.+|+.|||+||.|+||+++ .|.++|+|||.++.+.+.+.
T Consensus 128 KLYt~Qlfrg-l~yLh~~~IcHRDIKPqNlLvD~~-tg~LKicDFGSAK~L~~~ep 181 (364)
T KOG0658|consen 128 KLYTYQLFRG-LAYLHSHGICHRDIKPQNLLVDPD-TGVLKICDFGSAKVLVKGEP 181 (364)
T ss_pred HHHHHHHHHH-HHHHHhcCcccCCCChheEEEcCC-CCeEEeccCCcceeeccCCC
Confidence 2233333332 667888999999999999999975 69999999999999865543
No 68
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.46 E-value=1.8e-13 Score=147.46 Aligned_cols=138 Identities=15% Similarity=0.169 Sum_probs=92.3
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.+ +|+.||+|+....-... ..+ .-.+..|.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~---------------------------------~~~~~~e~ 94 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK-RSD---------------------------------SAFFWEER 94 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhh---------------------------------HHHHHHHH
Confidence 46999999999999976 68999999874310000 000 00122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+..+.+ ..|.+++. ....++||||++|++|.++. ....++...+...+.++.
T Consensus 95 ~i~~~~~h--------------------p~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l--~~~~~~~~~~~~~~~qil 152 (370)
T cd05621 95 DIMAFANS--------------------PWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFYTAEVV 152 (370)
T ss_pred HHHHhCCC--------------------CCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHH--HhcCCCHHHHHHHHHHHH
Confidence 33333221 22333332 44568999999999998764 333455544444444433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|||+||+|||++ .++.++|+|||++..+.
T Consensus 153 ~aL~~LH~~~IvHrDLKp~NILl~--~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 153 LALDAIHSMGLIHRDVKPDNMLLD--KHGHLKLADFGTCMKMD 193 (370)
T ss_pred HHHHHHHHCCeEecCCCHHHEEEC--CCCCEEEEecccceecc
Confidence 7889999999999999999998 45899999999998764
No 69
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.46 E-value=2.1e-13 Score=146.03 Aligned_cols=133 Identities=20% Similarity=0.262 Sum_probs=90.1
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+........... .+.+|.
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~------------------------------------~~~~E~ 123 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRR------------------------------------QICREI 123 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHH------------------------------------HHHHHH
Confidence 57999999999999975 79999999986543211110 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++.| ..|.+++ . ....++||||++|++|.+... .+...+...+.+++
T Consensus 124 ~~l~~l~h--------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-----~~~~~~~~i~~qi~ 178 (353)
T PLN00034 124 EILRDVNH--------------------PNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHI-----ADEQFLADVARQIL 178 (353)
T ss_pred HHHHhCCC--------------------CCcceeeeEeccCCeEEEEEecCCCCccccccc-----CCHHHHHHHHHHHH
Confidence 55554432 1222222 2 455689999999998865321 12222222333322
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|+||.|||++ .++.++|+|||++..+.
T Consensus 179 ~aL~~LH~~~ivHrDlkp~NIll~--~~~~~kL~DfG~~~~~~ 219 (353)
T PLN00034 179 SGIAYLHRRHIVHRDIKPSNLLIN--SAKNVKIADFGVSRILA 219 (353)
T ss_pred HHHHHHHHCCEeecCCCHHHEEEc--CCCCEEEcccccceecc
Confidence 7788999999999999999998 45899999999987664
No 70
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.46 E-value=2.1e-13 Score=147.66 Aligned_cols=138 Identities=14% Similarity=0.149 Sum_probs=90.6
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+.. +|+.||||+.+..-. .. .+ ..-.+.+|.
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~--~~--------------------------~~------~~~~~~~E~ 52 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDV--LL--------------------------RN------QVAHVKAER 52 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHh--hh--------------------------HH------HHHHHHHHH
Confidence 46999999999999975 789999998753210 00 00 000133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++.+ ..|++++. ....+|||||++|++|.+... ....++...+...+.++.
T Consensus 53 ~il~~~~h--------------------~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~e~~~~~~~~qi~ 111 (382)
T cd05625 53 DILAEADN--------------------EWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLI-RMGIFPEDLARFYIAELT 111 (382)
T ss_pred HHHHhCCC--------------------CcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 44444322 22334432 445689999999998877632 112233333333333333
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|||+||.|||++ .+|.++|+|||++..+
T Consensus 112 ~al~~lH~~~ivHrDlKp~NILl~--~~g~~kL~DFGla~~~ 151 (382)
T cd05625 112 CAVESVHKMGFIHRDIKPDNILID--RDGHIKLTDFGLCTGF 151 (382)
T ss_pred HHHHHHHhCCeecCCCCHHHEEEC--CCCCEEEeECCCCccc
Confidence 7889999999999999999998 4589999999998654
No 71
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.46 E-value=1.6e-13 Score=147.66 Aligned_cols=140 Identities=16% Similarity=0.174 Sum_probs=94.0
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+.+..-. ... +.. -.+.+|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~--------------------------~~~------~~~~~E~ 52 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM--LEK--------------------------EQV------AHVRAER 52 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh--hhh--------------------------hHH------HHHHHHH
Confidence 57999999999999975 799999998753210 000 000 0123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+..+.+ ..|+.++. ....+|||||++|++|.+... ....++...+...+.+++
T Consensus 53 ~il~~l~h--------------------~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~ 111 (364)
T cd05599 53 DILAEADN--------------------PWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLM-KKDTFTEEETRFYIAETI 111 (364)
T ss_pred HHHHhCCC--------------------CCCcceEEEEEcCCeEEEEECCCCCcHHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 44443322 22333332 455689999999999887643 222345554544444444
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|+||+|||++ .++.++|+|||++..+..
T Consensus 112 ~aL~~lH~~~ivH~Dlkp~NIl~~--~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 112 LAIDSIHKLGYIHRDIKPDNLLLD--AKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred HHHHHHHHCCeEeccCCHHHeEEC--CCCCEEEeecccceeccc
Confidence 7789999999999999999998 458999999999887643
No 72
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.46 E-value=1.3e-13 Score=143.47 Aligned_cols=140 Identities=17% Similarity=0.144 Sum_probs=91.9
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+....-..... ..-.+.+|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~----------------------------------~~~~~~~E~ 52 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLK----------------------------------QEQHVHNEK 52 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhH----------------------------------HHHHHHHHH
Confidence 57999999999999976 7999999987532110000 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++.+ ..|.+++. ....++||||++|++|.+.... ...++...+...+.++.
T Consensus 53 ~~l~~l~h--------------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~ 111 (291)
T cd05612 53 RVLKEVSH--------------------PFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRN-SGRFSNSTGLFYASEIV 111 (291)
T ss_pred HHHHhCCC--------------------CcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 43333321 12223222 3445899999999998776432 22344444444444433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|+||.|||++ .++.++|+|||++..+..
T Consensus 112 ~~l~~lH~~~i~H~dlkp~NIli~--~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 112 CALEYLHSKEIVYRDLKPENILLD--KEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred HHHHHHHHCCeeecCCCHHHeEEC--CCCCEEEEecCcchhccC
Confidence 7889999999999999999998 458999999999876643
No 73
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.46 E-value=2e-13 Score=134.25 Aligned_cols=145 Identities=19% Similarity=0.225 Sum_probs=95.4
Q ss_pred cccC-ccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhh
Q 005995 119 MDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (666)
Q Consensus 119 ~~~~-~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 196 (666)
++|+ -.-+|.||||.||..+.+ +|.-.|+|++..+- +--++.+-+
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~-------vVklKQveH-------------------------- 90 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQK-------VVKLKQVEH-------------------------- 90 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHH-------HHHHHHHHH--------------------------
Confidence 3444 257999999999999976 78999999874321 000111100
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHc-CCCH--HH
Q 005995 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF-GVNK--QK 269 (666)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~--~~ 269 (666)
-.+|-+.+....+ ..+-+.+. .+..+|||||++|+.|..+.. +. .++. .+
T Consensus 91 -~~nEk~vL~~v~~--------------------PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lr--k~~rF~e~~ar 147 (355)
T KOG0616|consen 91 -THNEKRVLKAVSH--------------------PFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLR--KSGRFSEPHAR 147 (355)
T ss_pred -HhhHHHHHhhccC--------------------ceeEEEEEeeccCCeEEEEEeccCCccHHHHHH--hcCCCCchhHH
Confidence 1223333333221 12223332 456789999999999887643 22 2332 22
Q ss_pred HHHHHHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 270 VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 270 ~~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+-..-+-+.++.+|..++++||+||+|||++ .+|.|+++|||.++.++..
T Consensus 148 FYAAeivlAleylH~~~iiYRDLKPENiLlD--~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 148 FYAAEIVLALEYLHSLDIIYRDLKPENLLLD--QNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred HHHHHHHHHHHHHHhcCeeeccCChHHeeec--cCCcEEEEeccceEEecCc
Confidence 3333333448899999999999999999999 4699999999999999765
No 74
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.46 E-value=2.4e-13 Score=144.35 Aligned_cols=80 Identities=20% Similarity=0.155 Sum_probs=60.0
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
....+|||||++|++|.++.......++...+...+.+++ ++.+|..|++|+|+||+|||++ .++.++|+|||++.
T Consensus 73 ~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~--~~~~~kl~DfG~a~ 150 (331)
T cd05624 73 ENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLD--MNGHIRLADFGSCL 150 (331)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEc--CCCCEEEEecccee
Confidence 3456899999999999887543223444444444333333 7788999999999999999998 45899999999987
Q ss_pred ccCH
Q 005995 317 KLSS 320 (666)
Q Consensus 317 ~l~~ 320 (666)
.+..
T Consensus 151 ~~~~ 154 (331)
T cd05624 151 KMNQ 154 (331)
T ss_pred eccC
Confidence 7643
No 75
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.46 E-value=2.3e-13 Score=144.74 Aligned_cols=39 Identities=21% Similarity=0.286 Sum_probs=35.0
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|+||+|||++. ++.++|+|||+++.+.
T Consensus 187 L~~LH~~~ivHrDiKp~Nil~~~--~~~~kl~DfG~a~~~~ 225 (338)
T cd05102 187 MEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIY 225 (338)
T ss_pred HHHHHHCCEECCCCccceEEEcC--CCcEEEeecccccccc
Confidence 77889999999999999999984 5899999999998654
No 76
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.46 E-value=2.1e-13 Score=144.73 Aligned_cols=140 Identities=14% Similarity=0.129 Sum_probs=92.3
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+.. +|+.||||+.+..-. .. . . ..-.+..|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~-~-------------------------~------~~~~~~~e~ 52 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEM--LK-R-------------------------A------ETACFREER 52 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH--hh-h-------------------------h------hHHHHHHHH
Confidence 56999999999999975 789999998753100 00 0 0 000123333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+..+.+ ..|+.++. ....++||||++|++|.++.......+....+...+.+++
T Consensus 53 ~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~ 112 (331)
T cd05597 53 DVLVNGDR--------------------RWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMV 112 (331)
T ss_pred HHHHhCCC--------------------CCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 33333211 22333332 3456899999999999877532223344444444444433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|+||.|||++ .++.++|+|||++..+.
T Consensus 113 ~~l~~lH~~~ivH~dlkp~Nill~--~~~~~kl~Dfg~~~~~~ 153 (331)
T cd05597 113 LAIDSVHQLGYVHRDIKPDNVLLD--KNGHIRLADFGSCLRLL 153 (331)
T ss_pred HHHHHHHhCCeEECCCCHHHEEEC--CCCCEEEEECCceeecC
Confidence 7789999999999999999998 45899999999987664
No 77
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.45 E-value=2.6e-13 Score=146.74 Aligned_cols=140 Identities=16% Similarity=0.175 Sum_probs=92.8
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+....-. ...+ .+ -.+.+|.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~----------------------~~----------~~~~~E~ 52 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM--FKKD----------------------QL----------AHVKAER 52 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH--HHhH----------------------HH----------HHHHHHH
Confidence 57999999999999865 899999998743110 0000 00 0133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++.+ ..|++++. ....+|||||++|++|.+... ....++...+...+.+++
T Consensus 53 ~il~~l~h--------------------p~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~ql~ 111 (377)
T cd05629 53 DVLAESDS--------------------PWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLI-KYDTFSEDVTRFYMAECV 111 (377)
T ss_pred HHHHhCCC--------------------CCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 44443322 23444443 455789999999999977642 122344444333333433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|||+||.|||++ .++.++|+|||+++.+..
T Consensus 112 ~aL~~LH~~givHrDlkp~NIll~--~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 112 LAIEAVHKLGFIHRDIKPDNILID--RGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred HHHHHHHhCCeeccCCCHHHEEEC--CCCCEEEeeccccccccc
Confidence 7889999999999999999998 458999999999976543
No 78
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.45 E-value=1.4e-13 Score=146.96 Aligned_cols=149 Identities=13% Similarity=0.159 Sum_probs=103.5
Q ss_pred hhccccccC-ccccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhc
Q 005995 114 MGGMFMDFV-ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (666)
Q Consensus 114 ~~~~f~~~~-~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~ 192 (666)
|+..++++. ..+||+||||.||||+++ | +||||++.-.-...- -++
T Consensus 387 WeIp~~ev~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~~-------------------------qlq------ 433 (678)
T KOG0193|consen 387 WEIPPEEVLLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTPE-------------------------QLQ------ 433 (678)
T ss_pred cccCHHHhhccceeccccccceeecccc-c-ceEEEEEecCCCCHH-------------------------HHH------
Confidence 333333333 378999999999999986 3 899998753211100 011
Q ss_pred hhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHH
Q 005995 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (666)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~ 271 (666)
-|++|..++++-||. ++..=--+. .....+|+.||+|-+|.......+..++..++.
T Consensus 434 ----aFKnEVa~lkkTRH~------------------NIlLFMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~i 491 (678)
T KOG0193|consen 434 ----AFKNEVAVLKKTRHE------------------NILLFMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTI 491 (678)
T ss_pred ----HHHHHHHHHhhcchh------------------hheeeehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHH
Confidence 177788888887762 111100011 233479999999999998876666666666666
Q ss_pred HHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 272 ~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.+.-++. +.++|..+|+|+|+|.-||++.+ +++++|.|||++..-+
T Consensus 492 dIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~--~~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 492 DIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHE--DLKVKIGDFGLATVKT 539 (678)
T ss_pred HHHHHHHHhhhhhhhhhhhhhhccccceEEcc--CCcEEEecccceeeee
Confidence 5555554 77899999999999999999984 5899999999987543
No 79
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.45 E-value=2.3e-13 Score=143.99 Aligned_cols=139 Identities=13% Similarity=0.115 Sum_probs=91.0
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
..||+|++|+||+|+.+ +|+.||||+.+..... .+-. .-.+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~-------------------------------~~~~~~e~ 51 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI---QDDD-------------------------------VECTMVEK 51 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh---hhhH-------------------------------HHHHHHHH
Confidence 57999999999999865 7999999987642110 0000 00122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+..+.+ +..++.++. ....+|||||++|++|.+... ....++...+...+.+++
T Consensus 52 ~~l~~~~~-------------------~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~-~~~~l~~~~~~~i~~qi~ 111 (323)
T cd05615 52 RVLALQDK-------------------PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ-QVGKFKEPQAVFYAAEIS 111 (323)
T ss_pred HHHHhccC-------------------CCchhheeeEEecCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 33332211 112333332 345689999999998876532 122345555555444443
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|+||+|||++ .++.++|+|||++...
T Consensus 112 ~al~~lH~~~ivHrDikp~Nill~--~~~~ikL~Dfg~~~~~ 151 (323)
T cd05615 112 VGLFFLHRRGIIYRDLKLDNVMLD--SEGHIKIADFGMCKEH 151 (323)
T ss_pred HHHHHHHHCCeeccCCCHHHeEEC--CCCCEEEecccccccc
Confidence 7889999999999999999998 4589999999998754
No 80
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.45 E-value=2.7e-13 Score=142.59 Aligned_cols=136 Identities=17% Similarity=0.110 Sum_probs=90.3
Q ss_pred cccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHHH
Q 005995 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (666)
Q Consensus 126 i~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 204 (666)
||+|++|.||+|+.. +|+.||||+.+...... .. ....+..|...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~---------------------------------~~~~~~~E~~~ 46 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVS-RS---------------------------------EVTHTLAERTV 46 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hh---------------------------------HHHHHHHHHHH
Confidence 689999999999976 68999999875321000 00 00013345555
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
+.++.+ + .|+.++ . ....++||||++|++|.+.... ...++...+...+.+++
T Consensus 47 l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~ 105 (312)
T cd05585 47 LAQVNC------------------P--FIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR-EGRFDLSRARFYTAELLCA 105 (312)
T ss_pred HHhCCC------------------C--cEeceeeEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 544422 2 222222 2 4556899999999998766432 22345444444444433
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|||+||.|||++ .++.++|+|||++...
T Consensus 106 l~~lH~~~i~HrDlkp~Nili~--~~~~~kl~Dfg~~~~~ 143 (312)
T cd05585 106 LENLHKFNVIYRDLKPENILLD--YQGHIALCDFGLCKLN 143 (312)
T ss_pred HHHHHhCCeEeCCCCHHHeEEC--CCCcEEEEECcccccC
Confidence 7889999999999999999998 4589999999998754
No 81
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.45 E-value=2.6e-13 Score=143.02 Aligned_cols=77 Identities=14% Similarity=0.169 Sum_probs=58.1
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
....++||||++|++|.+... ....++...+...+.+++ +..+|..|++|+|+||.||+++ .++.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~gg~L~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~--~~~~~kL~Dfg~a~ 144 (316)
T cd05592 68 KEHLFFVMEYLNGGDLMFHIQ-SSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLD--KDGHIKIADFGMCK 144 (316)
T ss_pred CCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEEC--CCCCEEEccCcCCe
Confidence 345689999999999876532 222345555444444443 7889999999999999999998 45899999999987
Q ss_pred cc
Q 005995 317 KL 318 (666)
Q Consensus 317 ~l 318 (666)
..
T Consensus 145 ~~ 146 (316)
T cd05592 145 EN 146 (316)
T ss_pred EC
Confidence 54
No 82
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.45 E-value=1.6e-13 Score=146.54 Aligned_cols=140 Identities=18% Similarity=0.187 Sum_probs=94.0
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+.. +|+.||||+.+...... .+ ..-.+..|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~~--------------------------------~~~~~~~e~ 52 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK--RN--------------------------------QIAHVRAER 52 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh--cc--------------------------------HHHHHHHHH
Confidence 46999999999999976 79999999976421100 00 001133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+..+.+ ..+++++. ....++||||++|++|.++.... ..++...+...+.++.
T Consensus 53 ~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~ 111 (350)
T cd05573 53 DILADADS--------------------PWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELV 111 (350)
T ss_pred HHHHhcCC--------------------CCccchhhheecCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 44333321 22333322 34568999999999988764322 3455555444444443
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|+||.|||++ .++.++|+|||++..+..
T Consensus 112 ~aL~~LH~~giiH~Dlkp~NIll~--~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 112 LALDSVHKLGFIHRDIKPDNILID--ADGHIKLADFGLCKKMNK 153 (350)
T ss_pred HHHHHHHHCCeeccCCCHHHeEEC--CCCCEEeecCCCCccCcc
Confidence 7889999999999999999998 458999999999987654
No 83
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.45 E-value=2.6e-13 Score=143.08 Aligned_cols=137 Identities=16% Similarity=0.169 Sum_probs=89.8
Q ss_pred ccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
.||+|++|.||+|+.+ +|+.||||+.++..... ..+.. .+..|.+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~---------------------------------~~~~e~~ 47 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI-DDDVE---------------------------------CTMVEKR 47 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-cchHH---------------------------------HHHHHHH
Confidence 5899999999999976 78999999986532100 00000 0122332
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+.... + +..+++++. .+..+|||||++|++|.+... ....++...+...+.++.
T Consensus 48 ~l~~~~-----------------~--~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~-~~~~~~~~~~~~~~~qi~~ 107 (316)
T cd05620 48 VLALAW-----------------E--NPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQ-DKGRFDLYRATFYAAEIVC 107 (316)
T ss_pred HHHhcc-----------------C--CCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 322211 1 123444442 345689999999998876532 222345554444444443
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
+..+|..|++|+|+||+||+++ .++.++|+|||++..
T Consensus 108 ~l~~lH~~~ivHrDlkp~Nil~~--~~~~~kl~Dfg~~~~ 145 (316)
T cd05620 108 GLQFLHSKGIIYRDLKLDNVMLD--RDGHIKIADFGMCKE 145 (316)
T ss_pred HHHHHHHCCeEecCCCHHHeEEC--CCCCEEeCccCCCee
Confidence 7889999999999999999998 458999999999864
No 84
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.44 E-value=3.3e-13 Score=143.25 Aligned_cols=140 Identities=17% Similarity=0.169 Sum_probs=91.6
Q ss_pred cccccceeeeeEEEEec----CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHH
Q 005995 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~----~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 199 (666)
+.||+|++|.||+|+.. +|+.||||+.+.........+ .-.+.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~---------------------------------~~~~~ 52 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKT---------------------------------VEHTR 52 (332)
T ss_pred EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhH---------------------------------HHHHH
Confidence 46999999999999853 689999998754211000000 00123
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHH
Q 005995 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (666)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~ 275 (666)
.|...+..+++ + ..++.++. ....++||||++|++|.+... ....++...+...+.
T Consensus 53 ~e~~~l~~l~~-----------------~--~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~ 112 (332)
T cd05614 53 TERNVLEHVRQ-----------------S--PFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLY-QRDNFSEDEVRFYSG 112 (332)
T ss_pred HHHHHHHhccC-----------------C--CCcccEEEEEecCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHH
Confidence 34444444321 1 12333332 344689999999998876532 223455555544444
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+++ +..+|..|++|||+||.|||++ .++.++|+|||++..+
T Consensus 113 qi~~~l~~lH~~~ivHrDlkp~Nili~--~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 113 EIILALEHLHKLGIVYRDIKLENILLD--SEGHVVLTDFGLSKEF 155 (332)
T ss_pred HHHHHHHHHHHCCcEecCCCHHHeEEC--CCCCEEEeeCcCCccc
Confidence 443 7889999999999999999998 4589999999998765
No 85
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.44 E-value=4.3e-13 Score=142.11 Aligned_cols=137 Identities=17% Similarity=0.167 Sum_probs=90.8
Q ss_pred ccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
.||+|++|+||+|+.. +|+.||||+.+......- .+. . .+..|..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~---------------------------~------~~~~e~~ 47 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDD-EDI---------------------------D------WVQTEKH 47 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh-hHH---------------------------H------HHHHHHH
Confidence 5899999999999975 689999999865321100 000 0 0223443
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+.++.+ +..|+.++. ....++||||++|++|.+... ....++...+...+.+++
T Consensus 48 ~~~~~~~-------------------~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~qi~~ 107 (327)
T cd05617 48 VFEQASS-------------------NPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQ-RQRKLPEEHARFYAAEICI 107 (327)
T ss_pred HHHhhcC-------------------CCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 3333321 123444432 345689999999998865532 123355554444444433
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
+..+|..|++|+|+||+|||++ .++.++|+|||++..
T Consensus 108 al~~lH~~~ivHrDlkp~Nili~--~~~~~kl~Dfg~~~~ 145 (327)
T cd05617 108 ALNFLHERGIIYRDLKLDNVLLD--ADGHIKLTDYGMCKE 145 (327)
T ss_pred HHHHHHHCCeeccCCCHHHEEEe--CCCCEEEecccccee
Confidence 7889999999999999999998 458999999999865
No 86
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.44 E-value=3.8e-13 Score=142.21 Aligned_cols=139 Identities=13% Similarity=0.117 Sum_probs=90.8
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+.+...... ..+. ..+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~---------------------------------~~~~~e~ 51 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDV---------------------------------ECTMVEK 51 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH---------------------------------HHHHHHH
Confidence 46999999999999876 68899999986532110 0000 0012232
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+....+ +..++.++. ....+|||||++|++|.+... ....++...+...+.+++
T Consensus 52 ~~l~~~~~-------------------~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~-~~~~~~~~~~~~~~~qi~ 111 (323)
T cd05616 52 RVLALSGK-------------------PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQ-QVGRFKEPHAVFYAAEIA 111 (323)
T ss_pred HHHHhccC-------------------CCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 22222111 123343332 344689999999998876532 222345555555555544
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|+||+|||++ .++.++|+|||++...
T Consensus 112 ~aL~~LH~~~ivHrDlkp~Nill~--~~~~~kL~DfG~~~~~ 151 (323)
T cd05616 112 IGLFFLHSKGIIYRDLKLDNVMLD--SEGHIKIADFGMCKEN 151 (323)
T ss_pred HHHHHHHHCCEEecCCCHHHeEEC--CCCcEEEccCCCceec
Confidence 7788999999999999999998 4589999999998754
No 87
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.44 E-value=3.4e-13 Score=145.40 Aligned_cols=139 Identities=16% Similarity=0.184 Sum_probs=92.5
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.+ +|+.||+|+....-.. -..+ .-.+..|.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~---------------------------------~~~~~~e~ 94 (371)
T cd05622 49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-KRSD---------------------------------SAFFWEER 94 (371)
T ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhh-hhHH---------------------------------HHHHHHHH
Confidence 57999999999999976 7899999987431000 0000 00122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+..+.+ ..|++++. ....++||||++|++|.++. ....++...+...+.++.
T Consensus 95 ~i~~~~~h--------------------p~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~--~~~~~~~~~~~~~~~qi~ 152 (371)
T cd05622 95 DIMAFANS--------------------PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAEVV 152 (371)
T ss_pred HHHHhCCC--------------------CCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHH--HhcCCCHHHHHHHHHHHH
Confidence 33333221 22333332 34568999999999998764 334455544444344433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|+||.|||++ .++.++|+|||++..+..
T Consensus 153 ~aL~~LH~~~ivHrDLkp~NIll~--~~~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 153 LALDAIHSMGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMNK 194 (371)
T ss_pred HHHHHHHHCCEEeCCCCHHHEEEC--CCCCEEEEeCCceeEcCc
Confidence 7889999999999999999998 458999999999987653
No 88
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.44 E-value=3.4e-13 Score=142.98 Aligned_cols=139 Identities=17% Similarity=0.138 Sum_probs=90.1
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||+|+.+....... .+. . .+..|.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~---------------------------~------~~~~E~ 46 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDD-EDI---------------------------D------WVQTEK 46 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcch-hHH---------------------------H------HHHHHH
Confidence 36899999999999975 789999999765321100 000 0 022233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++.+ + ..|+.++. .+..++||||++|++|.+... ....++...+...+.++.
T Consensus 47 ~~l~~~~~-----------------h--p~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~ 106 (329)
T cd05618 47 HVFEQASN-----------------H--PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEIS 106 (329)
T ss_pred HHHHhcCC-----------------C--CcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 22222211 1 22333332 456689999999998865432 223455544444444433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|+||.||+++ .++.++|+|||+++..
T Consensus 107 ~~l~~lH~~~ivH~Dikp~Nili~--~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 107 LALNYLHERGIIYRDLKLDNVLLD--SEGHIKLTDYGMCKEG 146 (329)
T ss_pred HHHHHHHHCCeeeCCCCHHHEEEC--CCCCEEEeeCCccccc
Confidence 7889999999999999999998 4589999999998753
No 89
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.44 E-value=3.5e-13 Score=142.94 Aligned_cols=137 Identities=18% Similarity=0.161 Sum_probs=90.7
Q ss_pred ccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
.||+|++|.||+|+.. +|+.||||+.+......- .+. + .+..|..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~-~~~-----------------------~----------~~~~e~~ 47 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDD-EDI-----------------------D----------WVQTEKH 47 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh-hHH-----------------------H----------HHHHHHH
Confidence 5899999999999975 789999999865321100 000 0 0222333
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+..+.+ +..|+.++. .+..+|||||++|++|.+... ....++...+...+.+++
T Consensus 48 il~~~~~-------------------hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~-~~~~l~~~~~~~~~~qi~~ 107 (329)
T cd05588 48 VFETASN-------------------HPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQ-RQRKLPEEHARFYSAEISL 107 (329)
T ss_pred HHHhccC-------------------CCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 3333211 122333332 355689999999998865532 223455555555444444
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
+..+|..|++|+|+||.||+++ .++.++|+|||+++.
T Consensus 108 ~l~~lH~~~ivH~dlkp~Nili~--~~~~~kL~Dfg~~~~ 145 (329)
T cd05588 108 ALNFLHERGIIYRDLKLDNVLLD--AEGHIKLTDYGMCKE 145 (329)
T ss_pred HHHHHHHCCeEecCCCHHHeEEC--CCCCEEECcCccccc
Confidence 7889999999999999999998 458999999999864
No 90
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.44 E-value=1e-13 Score=135.28 Aligned_cols=143 Identities=19% Similarity=0.181 Sum_probs=91.9
Q ss_pred cccccceeeeeEEEEe-cCCCEEEEEeeC-CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 124 TPLATASIAQVHRATL-VDGRQVVVKVQH-QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l-~~g~~VAVKv~~-p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
+.||.||||.||++.. .+|..||.|-.. -.+...-+.|+ ..|++..+.
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~------------------------------v~Ei~lLkQ 74 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDC------------------------------VKEISLLKQ 74 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHH------------------------------HHHHHHHHh
Confidence 4699999999999984 599999998433 22222222222 123332222
Q ss_pred HH--HHHHHHH-HhCCCCCCCCCCCCCCCCcceeeeeeeecCC-CeeEeeecCCccCCChhhHH---HcCCCHHHHHHHH
Q 005995 202 AE--NTRIVSA-NLGCKNKHEDSNKKPAYEVDVLIPEVIQSSE-TVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEI 274 (666)
Q Consensus 202 a~--n~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~-~vLvmE~i~G~~L~~~~~~~---~~~~~~~~~~~~l 274 (666)
.+ |+.++.+ .|.. ..+ ..||||+++++.|++..+-- ..-+..+.+-..+
T Consensus 75 L~HpNIVqYy~~~f~~------------------------~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f 130 (375)
T KOG0591|consen 75 LNHPNIVQYYAHSFIE------------------------DNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYF 130 (375)
T ss_pred cCCchHHHHHHHhhhc------------------------cchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHH
Confidence 21 3333332 2210 222 36899999999999875432 2234455555556
Q ss_pred HHHH--HHHhhh--cC--ccccCCCcCceEEeeCCCCceEEEecccccccCHHH
Q 005995 275 TRAY--AHQIYV--DG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (666)
Q Consensus 275 ~~~~--l~~i~~--~g--~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~ 322 (666)
++++ +..+|. .. ++||||||+||+++ .+|.++|-|||+++.++.+.
T Consensus 131 ~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~--~~gvvKLGDfGL~r~l~s~~ 182 (375)
T KOG0591|consen 131 VQLCRALYHCHSKIPRGTVMHRDIKPANIFLT--ANGVVKLGDFGLGRFLSSKT 182 (375)
T ss_pred HHHHHHHHHHhccccccceeeccCcchheEEc--CCCceeeccchhHhHhcchh
Confidence 6655 444554 33 99999999999999 56899999999999987654
No 91
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.44 E-value=5.8e-13 Score=135.88 Aligned_cols=138 Identities=22% Similarity=0.255 Sum_probs=95.2
Q ss_pred cccceeeeeEEEEec---CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 126 LATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 126 i~sgs~gqV~~a~l~---~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
||+|++|.||+|+++ ++..||||+..+........ +|.+|+
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~------------------------------------~~~~E~ 46 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRD------------------------------------EMMREA 46 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHH------------------------------------HHHHHH
Confidence 899999999999864 45679999886643221110 144455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--H
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l 279 (666)
..+.++.+ ++ +.+..+......++||||++|++|.+........++...+...+.++. +
T Consensus 47 ~~l~~l~h------------------~~ii~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l 108 (257)
T cd05115 47 EIMHQLDN------------------PYIVRMIGVCEAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGM 108 (257)
T ss_pred HHHHhcCC------------------CCeEEEEEEEcCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 55555432 11 222222224556899999999999876543333456666655555544 6
Q ss_pred HHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 280 ~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
..+|..|++|+|+||+||+++ .++.++|+|||++..+.
T Consensus 109 ~~lH~~~i~H~dlkp~nil~~--~~~~~kl~dfg~~~~~~ 146 (257)
T cd05115 109 KYLEGKNFVHRDLAARNVLLV--NQHYAKISDFGLSKALG 146 (257)
T ss_pred HHHHhcCeeecccchheEEEc--CCCcEEeccCCcccccc
Confidence 788999999999999999998 45889999999987654
No 92
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.44 E-value=1.7e-13 Score=145.85 Aligned_cols=141 Identities=21% Similarity=0.220 Sum_probs=99.4
Q ss_pred ccCc-cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 120 DFVE-TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 120 ~~~~-~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
.|++ +-||.|+||.||+|.+.+|+.||||...++.... +.+|
T Consensus 76 ~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-------------------------------------~~eF 118 (361)
T KOG1187|consen 76 NFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-------------------------------------EREF 118 (361)
T ss_pred CCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-------------------------------------hhHH
Confidence 4443 6799999999999999999999999765543210 2226
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-c---C-CCeeEeeecCCccCCChhhHHHc-CCCH---HH
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S---S-ETVLILEFMDGIRLNDCESLEAF-GVNK---QK 269 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~---~-~~vLvmE~i~G~~L~~~~~~~~~-~~~~---~~ 269 (666)
.+|...+.+++| ..+-+++. | + .++||.||++.++|.+....... .++- -+
T Consensus 119 ~~Ei~~ls~l~H--------------------~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~k 178 (361)
T KOG1187|consen 119 LNEVEILSRLRH--------------------PNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLK 178 (361)
T ss_pred HHHHHHHhcCCC--------------------cCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHH
Confidence 777777777654 12222232 2 3 38999999999999887433222 2332 34
Q ss_pred HHHHHHHHHHHHhhhc---CccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 270 VVEEITRAYAHQIYVD---GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 270 ~~~~l~~~~l~~i~~~---g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
|+..+++. +..+|.. -++|||+||.|||+| .+.+.+|.|||+++..+.
T Consensus 179 Ia~g~A~g-L~yLH~~~~~~iiHrDiKssNILLD--~~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 179 IALGAARG-LAYLHEGCPPPIIHRDIKSSNILLD--EDFNAKLSDFGLAKLGPE 229 (361)
T ss_pred HHHHHHHH-HHHHccCCCCCEecCCCCHHHeeEC--CCCCEEccCccCcccCCc
Confidence 55545554 6777774 399999999999999 469999999999976654
No 93
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.44 E-value=7.7e-13 Score=140.81 Aligned_cols=178 Identities=16% Similarity=0.191 Sum_probs=118.7
Q ss_pred HHHHHHHhhcCCC--CCHHHHHHHHHHHh-CCChhccccccCccccccceeeeeEEEEe-cCCCEEEEEeeCCChHHHHH
Q 005995 84 ISLLKQLQDSLPP--RPVQEVSQTIEREF-GESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIIL 159 (666)
Q Consensus 84 ~~~l~~l~d~~~~--~~~~~~~~~l~~~~-g~~~~~~f~~~~~~pi~sgs~gqV~~a~l-~~g~~VAVKv~~p~~~~~~~ 159 (666)
.....++.|+-.. ++-+++...+..-. ..++...|..|.. ||.|+-|-||.|+- .+++.||||...- ..+-.
T Consensus 238 ~~~~~~~~d~~~~~~~~~~~~~~~l~~v~~~~dP~~~y~~~~k--igqgaSG~vy~A~~~~~~~~VaiK~m~l--~~Q~~ 313 (550)
T KOG0578|consen 238 AQHKQQLSDSSAQSIVSKEEILAKLKRVVSQGDPRSKYTDFKK--IGQGATGGVYVARKISTKQEVAIKRMDL--RKQPK 313 (550)
T ss_pred hhcccccCchhccccchHHHHHHHhheeccCCChhhhhcchhh--hccccccceeeeeeccCCceEEEEEEEe--ccCCc
Confidence 3344455555332 34445555554422 2345666666665 99999999999985 4889999996421 11111
Q ss_pred HHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH--HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee
Q 005995 160 EDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA--ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI 237 (666)
Q Consensus 160 ~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea--~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~ 237 (666)
.+ .+..|+...++. .|+.+|-+.|-.
T Consensus 314 ke-----------------------------LilnEi~Vm~~~~H~NiVnfl~Sylv----------------------- 341 (550)
T KOG0578|consen 314 KE-----------------------------LLLNEILVMRDLHHPNIVNFLDSYLV----------------------- 341 (550)
T ss_pred hh-----------------------------hhHHHHHHHHhccchHHHHHHHHhcc-----------------------
Confidence 11 111222222222 355555443310
Q ss_pred ecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccc
Q 005995 238 QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (666)
Q Consensus 238 ~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~ 315 (666)
.++.+.||||++|++|+|+.. ...++...++..+-+.+ ++.+|..|++|||||-.|||+. .+|.++|.|||+|
T Consensus 342 -~deLWVVMEym~ggsLTDvVt--~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~--~~g~vKltDFGFc 416 (550)
T KOG0578|consen 342 -GDELWVVMEYMEGGSLTDVVT--KTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT--MDGSVKLTDFGFC 416 (550)
T ss_pred -cceeEEEEeecCCCchhhhhh--cccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec--cCCcEEEeeeeee
Confidence 466789999999999999854 44467777777666655 8899999999999999999999 4589999999999
Q ss_pred cccCHHH
Q 005995 316 KKLSSSM 322 (666)
Q Consensus 316 ~~l~~~~ 322 (666)
..++++.
T Consensus 417 aqi~~~~ 423 (550)
T KOG0578|consen 417 AQISEEQ 423 (550)
T ss_pred ecccccc
Confidence 9998765
No 94
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.44 E-value=6.1e-13 Score=140.80 Aligned_cols=76 Identities=18% Similarity=0.214 Sum_probs=57.0
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
....++||||++|++|.+... ....++...+...+.+++ +..+|..|++|+|+||+|||++ .++.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~--~~~~~kL~DfG~~~ 144 (325)
T cd05604 68 TEKLYFVLDFVNGGELFFHLQ-RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLD--SQGHVVLTDFGLCK 144 (325)
T ss_pred CCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC--CCCCEEEeecCCcc
Confidence 455689999999998865432 222344444444444433 7889999999999999999998 45899999999987
Q ss_pred c
Q 005995 317 K 317 (666)
Q Consensus 317 ~ 317 (666)
.
T Consensus 145 ~ 145 (325)
T cd05604 145 E 145 (325)
T ss_pred c
Confidence 5
No 95
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.43 E-value=3.9e-13 Score=144.95 Aligned_cols=138 Identities=16% Similarity=0.169 Sum_probs=92.0
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+....-... .. ..-.+..|.
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~---------------------------------~~~~~~~e~ 94 (370)
T cd05596 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK-RS---------------------------------DSAFFWEER 94 (370)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hh---------------------------------hHHHHHHHH
Confidence 57999999999999975 78999999875310000 00 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+..+.+ ..+++++ . ....++||||++|++|.++. ....++...+...+.+++
T Consensus 95 ~il~~~~h--------------------~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l--~~~~l~~~~~~~~~~qi~ 152 (370)
T cd05596 95 DIMAHANS--------------------EWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLM--SNYDIPEKWARFYTAEVV 152 (370)
T ss_pred HHHHhCCC--------------------CCcceEEEEEecCCEEEEEEcCCCCCcHHHHH--HhcCCCHHHHHHHHHHHH
Confidence 44333321 1233333 2 34468999999999998763 333455444444343433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|+||.|||++ .++.++|+|||++..+.
T Consensus 153 ~aL~~LH~~~ivHrDLkp~NILl~--~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 153 LALDAIHSMGFIHRDVKPDNMLLD--KSGHLKLADFGTCMKMD 193 (370)
T ss_pred HHHHHHHHCCeeccCCCHHHEEEc--CCCCEEEEeccceeecc
Confidence 7889999999999999999998 45899999999987664
No 96
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.43 E-value=3e-13 Score=140.50 Aligned_cols=136 Identities=15% Similarity=0.110 Sum_probs=89.4
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+.+...... ....+.+|.
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~E~ 54 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG------------------------------------APCTAIREV 54 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccCC------------------------------------cchhHHHHH
Confidence 57999999999999875 78999999875321100 000123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++.+ + .|.+++. ....++||||++| +|.+.........+...+...+.++.
T Consensus 55 ~~l~~l~h------------------~--niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~ 113 (288)
T cd07871 55 SLLKNLKH------------------A--NIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLL 113 (288)
T ss_pred HHHHhCCC------------------C--CEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 55544432 2 2334432 3345899999997 56554322222234444444443433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|+||.|||++ .++.++|+|||++...
T Consensus 114 ~aL~~LH~~~ivH~dlkp~Nil~~--~~~~~kl~DfG~~~~~ 153 (288)
T cd07871 114 RGLSYCHKRKILHRDLKPQNLLIN--EKGELKLADFGLARAK 153 (288)
T ss_pred HHHHHHHhCCcccCCCCHHHEEEC--CCCCEEECcCcceeec
Confidence 7788999999999999999998 4589999999998764
No 97
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.43 E-value=4.6e-13 Score=141.62 Aligned_cols=139 Identities=21% Similarity=0.237 Sum_probs=90.7
Q ss_pred cccccceeeeeEEEEec----CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHH
Q 005995 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~----~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 199 (666)
+.||+|++|.||+|+.. +|+.||||+.+..... .+.. ....+.
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~------------------------------~~~~~~ 48 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV---RNQK------------------------------DTAHTK 48 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH---hhhh------------------------------hHHHHH
Confidence 46899999999999853 6889999987542110 0000 011134
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHH
Q 005995 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (666)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~ 275 (666)
.|...+..+.+ ..|.+++ . .+..++||||++|++|.+.... ...+....+...+.
T Consensus 49 ~E~~il~~l~h--------------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ 107 (323)
T cd05584 49 AERNILEAVKH--------------------PFIVDLIYAFQTGGKLYLILEYLSGGELFMHLER-EGIFMEDTACFYLS 107 (323)
T ss_pred HHHHHHHhCCC--------------------CchhceeeEEecCCeEEEEEeCCCCchHHHHHHH-cCCCCHHHHHHHHH
Confidence 45555555432 1223332 2 4556899999999998765321 12233333333333
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
++. +..+|..|++|+|+||.|||++ .++.++|+|||+++..
T Consensus 108 qi~~~l~~lH~~~ivH~dlkp~Nil~~--~~~~~kl~Dfg~~~~~ 150 (323)
T cd05584 108 EISLALEHLHQQGIIYRDLKPENILLD--AQGHVKLTDFGLCKES 150 (323)
T ss_pred HHHHHHHHHHHCCeecCCCCHHHeEEC--CCCCEEEeeCcCCeec
Confidence 333 7889999999999999999998 4589999999998753
No 98
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.43 E-value=7.4e-13 Score=140.15 Aligned_cols=77 Identities=17% Similarity=0.166 Sum_probs=56.7
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
....++||||++|++|.+.... ........+...+.+++ +..+|..|++|||+||+|||++ .++.++|+|||+++
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~--~~~~~kl~DfG~a~ 144 (325)
T cd05602 68 ADKLYFVLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD--SQGHIVLTDFGLCK 144 (325)
T ss_pred CCeEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC--CCCCEEEccCCCCc
Confidence 4556899999999988765432 22333333333333333 7788999999999999999998 45899999999987
Q ss_pred cc
Q 005995 317 KL 318 (666)
Q Consensus 317 ~l 318 (666)
..
T Consensus 145 ~~ 146 (325)
T cd05602 145 EN 146 (325)
T ss_pred cc
Confidence 54
No 99
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.42 E-value=6.4e-13 Score=137.47 Aligned_cols=141 Identities=15% Similarity=0.139 Sum_probs=91.4
Q ss_pred cccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHHH
Q 005995 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (666)
Q Consensus 126 i~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 204 (666)
||+|++|.||++..+ +|+.||||+......... ..+ -.+..|.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~---------------------------~~~-------~~~~~E~~i 46 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKR---------------------------KGY-------EGAMVEKRI 46 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhh---------------------------HHH-------HHHHHHHHH
Confidence 689999999999865 799999998653211000 000 013345555
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCcce-eeeeeee-cCCCeeEeeecCCccCCChhhH---HHcCCCHHHHHHHHHHHH-
Q 005995 205 TRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~~~~~l~~~~- 278 (666)
+..+.+ +.+ .+...+. ....++||||++|++|.+.... ....++...+...+.+++
T Consensus 47 l~~l~~------------------~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~ 108 (280)
T cd05608 47 LAKVHS------------------RFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIIS 108 (280)
T ss_pred HHhCCC------------------CcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHH
Confidence 554422 111 1222222 3456899999999998765321 112344555544444443
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|++|.||+++ .++.++|+|||++..+..
T Consensus 109 ~l~~lH~~~i~H~dlkp~Nili~--~~~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 109 GLEHLHQRRIIYRDLKPENVLLD--NDGNVRISDLGLAVELKD 149 (280)
T ss_pred HHHHHHHCCcccCCCCHHHEEEC--CCCCEEEeeCccceecCC
Confidence 7789999999999999999998 458899999999876643
No 100
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.42 E-value=1.9e-12 Score=123.25 Aligned_cols=128 Identities=23% Similarity=0.368 Sum_probs=91.8
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+|++.|..++||+++. +|+.|+||+.+++.. ...++..|++
T Consensus 4 ~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~--------------------------------------~~~~~~~E~~ 44 (170)
T cd05151 4 SPLKGGMTNKNYRVEV-ANKKYVVRIPGNGTE--------------------------------------LLINRENEAE 44 (170)
T ss_pred eecCCcccCceEEEEE-CCeEEEEEeCCCCcc--------------------------------------cccCHHHHHH
Confidence 6899999999999986 588999998765431 1123556888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHHHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 281 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l~~ 281 (666)
.+..+.+. ..+|+++. .+..++||||++|.++.+.. .........+.+ .+..
T Consensus 45 ~l~~l~~~-------------------~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~------~~~~~~~~~l~~-~l~~ 98 (170)
T cd05151 45 NSKLAAEA-------------------GIGPKLYYFDPETGVLITEFIEGSELLTED------FSDPENLEKIAK-LLKK 98 (170)
T ss_pred HHHHHHHh-------------------CCCCceEEEeCCCCeEEEEecCCCcccccc------ccCHHHHHHHHH-HHHH
Confidence 88877652 23677776 44579999999999887531 111223333333 3556
Q ss_pred hhhcC-----ccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 282 IYVDG-----FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 282 i~~~g-----~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+|..+ ++|+|+||+||+++ +++++++|||.++.-+
T Consensus 99 LH~~~~~~~~~~HgD~~~~Nil~~---~~~~~liDf~~a~~~~ 138 (170)
T cd05151 99 LHSSPLPDLVPCHNDLLPGNFLLD---DGRLWLIDWEYAGMND 138 (170)
T ss_pred HhCCCCCCceeecCCCCcCcEEEE---CCeEEEEecccccCCC
Confidence 77766 59999999999998 3689999999988644
No 101
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.42 E-value=7.7e-13 Score=139.90 Aligned_cols=77 Identities=17% Similarity=0.176 Sum_probs=57.2
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
....++||||++|++|.+.... ...++...+...+.+++ +..+|..|++|+|+||+|||++ .++.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~--~~~~~kl~Dfg~~~ 144 (323)
T cd05575 68 ADKLYFVLDYVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLD--SQGHVVLTDFGLCK 144 (323)
T ss_pred CCEEEEEEcCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC--CCCcEEEeccCCCc
Confidence 4556899999999988765321 22344444444344433 7889999999999999999998 45899999999986
Q ss_pred cc
Q 005995 317 KL 318 (666)
Q Consensus 317 ~l 318 (666)
..
T Consensus 145 ~~ 146 (323)
T cd05575 145 EG 146 (323)
T ss_pred cc
Confidence 53
No 102
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.42 E-value=7.9e-13 Score=139.65 Aligned_cols=76 Identities=17% Similarity=0.193 Sum_probs=56.3
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
....++||||++|++|.+... ....+....+...+.++. +..+|..|++|+|+||.||+++ .++.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~--~~~~~kl~Dfg~~~ 144 (321)
T cd05603 68 AEKLYFVLDYVNGGELFFHLQ-RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLD--SQGHVVLTDFGLCK 144 (321)
T ss_pred CCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC--CCCCEEEccCCCCc
Confidence 345689999999998865432 222344444444333433 7888999999999999999998 45899999999987
Q ss_pred c
Q 005995 317 K 317 (666)
Q Consensus 317 ~ 317 (666)
.
T Consensus 145 ~ 145 (321)
T cd05603 145 E 145 (321)
T ss_pred c
Confidence 5
No 103
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.42 E-value=5.5e-13 Score=141.08 Aligned_cols=140 Identities=14% Similarity=0.149 Sum_probs=91.7
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|... +|+.||||+.++.....- .+.. .+..|.
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~-~~~~---------------------------------~l~~e~ 50 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIAR-DEVE---------------------------------SLMCEK 50 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhh-hHHH---------------------------------HHHHHH
Confidence 46999999999999865 799999999865321000 0000 122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+..++. + .+ ..|.+++ . ....++||||++|++|... +....++...+...+.+++
T Consensus 51 ~~~~~~~~-l--------------~h--p~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~--~~~~~l~~~~~~~~~~qi~ 111 (324)
T cd05589 51 RIFETANS-E--------------RH--PFLVNLFACFQTEDHVCFVMEYAAGGDLMMH--IHTDVFSEPRAVFYAACVV 111 (324)
T ss_pred HHHHhccc-c--------------CC--CChhceeeEEEcCCEEEEEEcCCCCCcHHHH--hhcCCCCHHHHHHHHHHHH
Confidence 32222211 1 11 2233333 2 4556899999999988654 2334456555555555544
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|+||.||+++ .++.++|+|||++...
T Consensus 112 ~al~~lH~~~ivHrdlkp~Nill~--~~~~~kL~Dfg~~~~~ 151 (324)
T cd05589 112 LGLQYLHENKIVYRDLKLDNLLLD--TEGFVKIADFGLCKEG 151 (324)
T ss_pred HHHHHHHhCCeEecCCCHHHeEEC--CCCcEEeCcccCCccC
Confidence 7789999999999999999998 4589999999998753
No 104
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.42 E-value=4e-13 Score=140.62 Aligned_cols=138 Identities=20% Similarity=0.235 Sum_probs=90.6
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||.|++|.||+|+.+ +|+.||||+.+...... ....+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~E~ 54 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG------------------------------------TPFTAIREA 54 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEeccccccc------------------------------------cchhHHHHH
Confidence 57999999999999976 79999999875321100 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcce-eeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
..+.++.+ +++ .+...+. ....++||||++|. +.+........++...+...+.+++
T Consensus 55 ~~l~~l~h------------------~niv~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~a 115 (303)
T cd07869 55 SLLKGLKH------------------ANIVLLHDIIHTKETLTLVFEYVHTD-LCQYMDKHPGGLHPENVKLFLFQLLRG 115 (303)
T ss_pred HHHhhCCC------------------CCcCeEEEEEecCCeEEEEEECCCcC-HHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 55544432 222 2222332 45568999999763 3333221223355555555555544
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|+||+|||++ .++.++|+|||++...
T Consensus 116 l~~lH~~~ivH~dlkp~Nill~--~~~~~kl~Dfg~~~~~ 153 (303)
T cd07869 116 LSYIHQRYILHRDLKPQNLLIS--DTGELKLADFGLARAK 153 (303)
T ss_pred HHHHHHCCeecCCCCHHHEEEC--CCCCEEECCCCcceec
Confidence 7889999999999999999998 4588999999998654
No 105
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.41 E-value=1.7e-13 Score=138.65 Aligned_cols=145 Identities=17% Similarity=0.211 Sum_probs=85.6
Q ss_pred ccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
.+|||.|++|.|+.|+.+ +|+.||||-.. ..+..-+ ..++..+ |
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~----~~F~~~~-------------------------~akRtlR------E 71 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKIL----NPFENQI-------------------------DAKRTLR------E 71 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhh----hhhhchH-------------------------HHHHHHH------H
Confidence 489999999999999975 89999999321 1111100 0111122 3
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cCCCeeEeeecCCccCCChhhHHHcC-CCHHHHHHHHHHHH-
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITRAY- 278 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~~~~~l~~~~- 278 (666)
.+-++.++|. ... ...++..|.... -.+-++|+|+++ ..|.++.+ ... +....+-.-+-+++
T Consensus 72 lklLr~~~He-----NIi-------~l~di~~p~~~~~f~DvYiV~elMe-tDL~~iik--~~~~L~d~H~q~f~YQiLr 136 (359)
T KOG0660|consen 72 LKLLRHLRHE-----NII-------GLLDIFRPPSRDKFNDVYLVFELME-TDLHQIIK--SQQDLTDDHAQYFLYQILR 136 (359)
T ss_pred HHHHHHhcCC-----Ccc-------eEEeecccccccccceeEEehhHHh-hHHHHHHH--cCccccHHHHHHHHHHHHH
Confidence 3444444431 000 011233332211 355689999994 34444422 211 22222222222222
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
++.+|..|++|||+||+|++++ .+..++++|||+++..+
T Consensus 137 gLKyiHSAnViHRDLKPsNll~n--~~c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 137 GLKYIHSANVIHRDLKPSNLLLN--ADCDLKICDFGLARYLD 176 (359)
T ss_pred hcchhhcccccccccchhheeec--cCCCEEeccccceeecc
Confidence 5667789999999999999999 45889999999999995
No 106
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.41 E-value=5.5e-13 Score=142.07 Aligned_cols=140 Identities=18% Similarity=0.096 Sum_probs=91.9
Q ss_pred cccccceeeeeEEEEec--CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 124 TPLATASIAQVHRATLV--DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~--~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
+.||+|++|.||+|+.+ ++..||||+....... ..+ ..-.+.+|
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~--~~~--------------------------------~~~~~~~E 81 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII--KQK--------------------------------QVDHVFSE 81 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh--hhh--------------------------------hHHHHHHH
Confidence 67999999999999865 2468999976431100 000 00013445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~ 277 (666)
...+..+.+ ..|++++. ....++||||++|++|.+.... ...++...+...+.++
T Consensus 82 ~~~l~~l~h--------------------p~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~~~~~~~~~~~~qi 140 (340)
T PTZ00426 82 RKILNYINH--------------------PFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRR-NKRFPNDVGCFYAAQI 140 (340)
T ss_pred HHHHHhCCC--------------------CCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHH
Confidence 555554432 22333332 3456899999999998776432 2234444433333333
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
. +..+|..|++|||+||+|||++ .++.++|+|||++..++.
T Consensus 141 ~~aL~~LH~~~ivHrDLkp~NILl~--~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 141 VLIFEYLQSLNIVYRDLKPENLLLD--KDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred HHHHHHHHHCCeEccCCCHHHEEEC--CCCCEEEecCCCCeecCC
Confidence 3 7788999999999999999998 468999999999987653
No 107
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.41 E-value=3.2e-13 Score=142.68 Aligned_cols=140 Identities=17% Similarity=0.168 Sum_probs=92.1
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+-||.||+|.||+|+.+ +++.||+|+....- +-..|+++++ +|++..++.
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~g--r~~k~l~~l~---------------------------~ev~i~r~l 58 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSG--RNEKELKNLR---------------------------QEVRILRSL 58 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcC--CchHHHHHHH---------------------------HHHHHHHhc
Confidence 35999999999999977 78999999863211 1122333222 222222222
Q ss_pred --HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 203 --ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 --~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
.|+..+.+.|+. +...++|.||+.| .|..+..-. ..+..+.+-....+.+
T Consensus 59 kHpniv~m~esfEt------------------------~~~~~vVte~a~g-~L~~il~~d-~~lpEe~v~~~a~~LVsa 112 (808)
T KOG0597|consen 59 KHPNIVEMLESFET------------------------SAHLWVVTEYAVG-DLFTILEQD-GKLPEEQVRAIAYDLVSA 112 (808)
T ss_pred CCcchhhHHHhhcc------------------------cceEEEEehhhhh-hHHHHHHhc-cCCCHHHHHHHHHHHHHH
Confidence 144444443331 4556899999999 676653321 2233333333333332
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
++.+|.+++.|||+||.|||+. .+|.++|+|||+++..+.
T Consensus 113 L~yLhs~rilhrd~kPqniLl~--~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 113 LYYLHSNRILHRDMKPQNILLE--KGGTLKLCDFGLARAMST 152 (808)
T ss_pred HHHHHhcCcccccCCcceeeec--CCCceeechhhhhhhccc
Confidence 8899999999999999999998 568999999999998765
No 108
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.41 E-value=1.1e-12 Score=134.95 Aligned_cols=79 Identities=25% Similarity=0.280 Sum_probs=59.5
Q ss_pred CCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 241 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
...+.|||++|++|.+...-....++...+..-..++. +.++|.+|++|||+||.|||++.. ++.++|.|||+++.+
T Consensus 90 ~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~-~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 90 EYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS-NGDVKLADFGLAKKL 168 (313)
T ss_pred eeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC-CCeEEeccCcccccc
Confidence 35799999999999987432221244444444343433 888999999999999999999942 589999999999887
Q ss_pred CH
Q 005995 319 SS 320 (666)
Q Consensus 319 ~~ 320 (666)
..
T Consensus 169 ~~ 170 (313)
T KOG0198|consen 169 ES 170 (313)
T ss_pred cc
Confidence 63
No 109
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.41 E-value=9.7e-13 Score=139.53 Aligned_cols=77 Identities=21% Similarity=0.216 Sum_probs=58.7
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
.+..++||||++|++|.+... ....++...+...+.+++ +..+|..|++|+|+||.|||++ .++.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~--~~~~~kl~Dfg~a~ 144 (330)
T cd05586 68 DSDLYLVTDYMSGGELFWHLQ-KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLD--ATGHIALCDFGLSK 144 (330)
T ss_pred CCeEEEEEcCCCCChHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC--CCCCEEEecCCcCc
Confidence 455689999999998866532 223355555555444444 7889999999999999999998 45899999999987
Q ss_pred cc
Q 005995 317 KL 318 (666)
Q Consensus 317 ~l 318 (666)
..
T Consensus 145 ~~ 146 (330)
T cd05586 145 AN 146 (330)
T ss_pred CC
Confidence 54
No 110
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.40 E-value=7.1e-13 Score=141.35 Aligned_cols=157 Identities=19% Similarity=0.226 Sum_probs=96.7
Q ss_pred HHHhCCChhccccccC-ccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHH
Q 005995 107 EREFGESMGGMFMDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPI 184 (666)
Q Consensus 107 ~~~~g~~~~~~f~~~~-~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~ 184 (666)
++|+++...++...|. .++||+|++|+||+|+.. +|+.||||+...........
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~------------------------ 58 (343)
T cd07878 3 RQELNKTVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHA------------------------ 58 (343)
T ss_pred HHHHhHHHhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHH------------------------
Confidence 4455554445544444 368999999999999864 78999999876432211000
Q ss_pred HHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee-------ecCCCeeEeeecCCccCCCh
Q 005995 185 IDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI-------QSSETVLILEFMDGIRLNDC 257 (666)
Q Consensus 185 ~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~-------~~~~~vLvmE~i~G~~L~~~ 257 (666)
-.+.+|.+.+.++.+.. -+.+..++ .....+++||++ |.+|.++
T Consensus 59 -----------~~~~~E~~~l~~l~h~~-----------------iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 109 (343)
T cd07878 59 -----------RRTYRELRLLKHMKHEN-----------------VIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNI 109 (343)
T ss_pred -----------HHHHHHHHHHHhcCCCc-----------------hhhhhhhhcccccccccCcEEEEeecC-CCCHHHH
Confidence 00122333333332200 00000000 023457999988 5566554
Q ss_pred hhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 258 ESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 258 ~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
. ....++...+...+.+++ +..+|..|++|+|+||+||+++ .++.++|+|||++...+.
T Consensus 110 ~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~--~~~~~kl~Dfg~~~~~~~ 170 (343)
T cd07878 110 V--KCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVN--EDCELRILDFGLARQADD 170 (343)
T ss_pred H--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEEC--CCCCEEEcCCccceecCC
Confidence 3 233455555555554544 7788999999999999999998 458999999999887654
No 111
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.40 E-value=1.2e-12 Score=141.50 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=35.2
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|+||.|||++. ++.++|+|||++..+..
T Consensus 227 l~~lH~~~ivH~Dlkp~Nill~~--~~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 227 MSFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIRN 266 (375)
T ss_pred HHHHHHCCeeccCCchhhEEEEC--CCcEEEecCccceeccC
Confidence 77889999999999999999983 57899999999887643
No 112
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.40 E-value=4.8e-13 Score=142.72 Aligned_cols=142 Identities=18% Similarity=0.318 Sum_probs=94.9
Q ss_pred cccccCccccccceeeeeEEEEecC-CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhh
Q 005995 117 MFMDFVETPLATASIAQVHRATLVD-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (666)
Q Consensus 117 ~f~~~~~~pi~sgs~gqV~~a~l~~-g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 195 (666)
.|..+ ++||-|.||.|..++--| ....|.|-+|. .|. +.+.-...+..|
T Consensus 630 mFvki--k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrK-------aDV---------------------l~rnQvaHVKAE 679 (1034)
T KOG0608|consen 630 MFVKI--KTIGVGAFGEVCLVRKVDTRALYAMKTLRK-------ADV---------------------LMRNQVAHVKAE 679 (1034)
T ss_pred ceEEE--eeecccccceeEEEeecchhhHHHHhhhHH-------HHH---------------------Hhhhhhhhhhhh
Confidence 45544 479999999999998544 34467774431 221 111222234456
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHH
Q 005995 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (666)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~ 271 (666)
-|...||.| -.|-++|. ....+.|||||+|+.+-.+ +-+.|+=.+.++
T Consensus 680 RDILAEADn--------------------------~WVVrLyySFQDkdnLYFVMdYIPGGDmMSL--LIrmgIFeE~LA 731 (1034)
T KOG0608|consen 680 RDILAEADN--------------------------EWVVRLYYSFQDKDNLYFVMDYIPGGDMMSL--LIRMGIFEEDLA 731 (1034)
T ss_pred hhhHhhcCC--------------------------cceEEEEEEeccCCceEEEEeccCCccHHHH--HHHhccCHHHHH
Confidence 666666643 23445554 4567899999999988766 345555444444
Q ss_pred HHH---HHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 272 EEI---TRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 272 ~~l---~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+-- +.+.++.+|.-|||||||||.|||||. +|.|+|.|||+|.-+
T Consensus 732 RFYIAEltcAiesVHkmGFIHRDiKPDNILIDr--dGHIKLTDFGLCTGf 779 (1034)
T KOG0608|consen 732 RFYIAELTCAIESVHKMGFIHRDIKPDNILIDR--DGHIKLTDFGLCTGF 779 (1034)
T ss_pred HHHHHHHHHHHHHHHhccceecccCccceEEcc--CCceeeeeccccccc
Confidence 322 223378889999999999999999995 599999999999865
No 113
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.40 E-value=8.9e-13 Score=140.00 Aligned_cols=79 Identities=18% Similarity=0.137 Sum_probs=58.8
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
....+|||||++|++|.++.......++...+...+.++. +..+|..|++|+|+||.|||++ .++.++|+|||++.
T Consensus 73 ~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~--~~~~~kL~DfG~a~ 150 (332)
T cd05623 73 ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD--MNGHIRLADFGSCL 150 (332)
T ss_pred CCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC--CCCCEEEeecchhe
Confidence 3556899999999999887542223344444443333333 7789999999999999999998 45899999999987
Q ss_pred ccC
Q 005995 317 KLS 319 (666)
Q Consensus 317 ~l~ 319 (666)
.+.
T Consensus 151 ~~~ 153 (332)
T cd05623 151 KLM 153 (332)
T ss_pred ecc
Confidence 653
No 114
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.40 E-value=1e-12 Score=152.08 Aligned_cols=139 Identities=15% Similarity=0.131 Sum_probs=93.5
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+.+.+....-. . .-.|.+|+
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~----------------------------~------~~rflrEi 53 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPL----------------------------L------KKRFLREA 53 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHH----------------------------H------HHHHHHHH
Confidence 57999999999999975 6999999988654321100 0 01144566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH----------cCCCHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------FGVNKQ 268 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~----------~~~~~~ 268 (666)
+.+.++.+ ..|++++. ....++||||++|++|.++..... .+.+..
T Consensus 54 ~ILs~L~H--------------------PNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~ 113 (932)
T PRK13184 54 KIAADLIH--------------------PGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVG 113 (932)
T ss_pred HHHHhCCC--------------------cCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHH
Confidence 55555432 22333332 445689999999999987643210 111222
Q ss_pred HHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 269 ~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
.+...+.++. +..+|..|++|||+||+||+++ .++.++|+|||++...
T Consensus 114 ~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd--~dg~vKLiDFGLAk~i 163 (932)
T PRK13184 114 AFLSIFHKICATIEYVHSKGVLHRDLKPDNILLG--LFGEVVILDWGAAIFK 163 (932)
T ss_pred HHHHHHHHHHHHHHHHHHCCccccCCchheEEEc--CCCCEEEEecCcceec
Confidence 3333333333 7788999999999999999998 4589999999999876
No 115
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.40 E-value=1.1e-12 Score=139.11 Aligned_cols=138 Identities=20% Similarity=0.200 Sum_probs=93.1
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+.+ +|..||+|+.+.+....... .+.+|.
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~------------------------------------~~~~E~ 54 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRN------------------------------------QIIREL 54 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHH------------------------------------HHHHHH
Confidence 46999999999999976 78999999987643221110 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++.+ ..+.+++ . ....++||||++|++|.++... ...++...+...+.++.
T Consensus 55 ~~l~~l~h--------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~ 113 (331)
T cd06649 55 QVLHECNS--------------------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVL 113 (331)
T ss_pred HHHHHCCC--------------------CCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 55554432 1233333 2 4556899999999999877432 22344444444333333
Q ss_pred --HHHhhh-cCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~-~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|. +|++|+|+||+|||++ .++.++|+|||+++.+..
T Consensus 114 ~~l~~lH~~~~ivH~dlkp~Nil~~--~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 114 RGLAYLREKHQIMHRDVKPSNILVN--SRGEIKLCDFGVSGQLID 156 (331)
T ss_pred HHHHHHhhcCCEEcCCCChhhEEEc--CCCcEEEccCcccccccc
Confidence 667776 4799999999999998 458999999999876643
No 116
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.39 E-value=1.1e-12 Score=138.23 Aligned_cols=139 Identities=19% Similarity=0.183 Sum_probs=94.1
Q ss_pred cccccceeeeeEEEEec-CCC----EEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 124 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~----~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
+.||+|++|+||+|+.. +|+ .||||+.++....... -++
T Consensus 13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~ 56 (316)
T cd05108 13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------------------------------------KEI 56 (316)
T ss_pred eeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHH------------------------------------HHH
Confidence 57999999999999864 444 4899987643221110 013
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHH
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~ 275 (666)
.+|...+..+.| ..|.+++. .....++|||+++++|.+........++...+...+.
T Consensus 57 ~~e~~~l~~l~h--------------------~niv~~~g~~~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~ 116 (316)
T cd05108 57 LDEAYVMASVDN--------------------PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 116 (316)
T ss_pred HHHHHHHHhCCC--------------------CCCCeEEEEEcCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHH
Confidence 345544444322 22333443 4556899999999998876433222345555555444
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
++. +..+|..|++|+|+||.||+++ .++.++|+|||+++.+..
T Consensus 117 qi~~~L~~LH~~~iiH~dlkp~Nill~--~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 117 QIAKGMNYLEERRLVHRDLAARNVLVK--TPQHVKITDFGLAKLLGA 161 (316)
T ss_pred HHHHHHHHHHhcCeeccccchhheEec--CCCcEEEccccccccccC
Confidence 544 7889999999999999999998 457899999999987653
No 117
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.39 E-value=5.4e-13 Score=138.68 Aligned_cols=153 Identities=17% Similarity=0.243 Sum_probs=94.8
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
.-||+|++|.|-.|+.. +|+-|||||+...-.. + .......+...+.+ =-+.++|.
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~---------~---~~~~~~~~a~~~~~-----------~ekv~~EI 159 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELR---------R---QYGFPRQPAMKLMP-----------IEKVRREI 159 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhhhh---------h---hcccccccccccCc-----------HHHHHHHH
Confidence 46999999999999965 8999999997531100 0 00000000000000 00244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
..++++.|- .-|..-++.. +++.+||+|||..+.+........ .+.....-..+....
T Consensus 160 ailKkl~H~-----------------nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~-els~~~Ar~ylrDvv~ 221 (576)
T KOG0585|consen 160 AILKKLHHP-----------------NVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKP-ELSEQQARKYLRDVVL 221 (576)
T ss_pred HHHHhcCCc-----------------CeeEEEEeecCcccCceEEEEEeccCCccccCCCCcc-cccHHHHHHHHHHHHH
Confidence 777776541 1233344443 677899999999988876422110 022222222222222
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
++.+|..|++||||||.|+|++ .+|+++|.|||.+...+
T Consensus 222 GLEYLH~QgiiHRDIKPsNLLl~--~~g~VKIsDFGVs~~~~ 261 (576)
T KOG0585|consen 222 GLEYLHYQGIIHRDIKPSNLLLS--SDGTVKISDFGVSNEFP 261 (576)
T ss_pred HHHHHHhcCeeccccchhheEEc--CCCcEEeeccceeeecc
Confidence 8889999999999999999999 45999999999988763
No 118
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.39 E-value=1.1e-12 Score=134.48 Aligned_cols=137 Identities=12% Similarity=0.080 Sum_probs=93.6
Q ss_pred cccccceeeeeEEEEec----CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHH
Q 005995 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~----~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 199 (666)
+.||+|++|+||+|+++ .+..||+|+.+.+..... ..+|.
T Consensus 11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~------------------------------------~~~~~ 54 (266)
T cd05064 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQ------------------------------------RRGFL 54 (266)
T ss_pred eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHH------------------------------------HHHHH
Confidence 46999999999999864 467899998765432110 01234
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHH
Q 005995 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (666)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~ 275 (666)
+|...+.++++ ..+++++. ....++||||++|++|.++.......++...+...+.
T Consensus 55 ~e~~~l~~l~h--------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~ 114 (266)
T cd05064 55 AEALTLGQFDH--------------------SNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLP 114 (266)
T ss_pred HHHHHHhcCCC--------------------CCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHH
Confidence 45544444322 23344432 4567899999999999877543223345555555444
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
++. +..+|..|++|+|+||.||+++ .++.+++.|||.....
T Consensus 115 ~i~~al~~lH~~~iiH~dikp~nili~--~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 115 GLASGMKYLSEMGYVHKGLAAHKVLVN--SDLVCKISGFRRLQED 157 (266)
T ss_pred HHHHHHHHHHHCCEeeccccHhhEEEc--CCCcEEECCCcccccc
Confidence 443 6789999999999999999998 4588999999986654
No 119
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.38 E-value=1.2e-12 Score=137.95 Aligned_cols=138 Identities=20% Similarity=0.212 Sum_probs=92.5
Q ss_pred cccccceeeeeEEEEe----cCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHH
Q 005995 124 TPLATASIAQVHRATL----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l----~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 199 (666)
+.||+|++|.||+++. .+|+.||||+.+...... . ....+.
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~--~---------------------------------~~~~~~ 46 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV--R---------------------------------DRVRTK 46 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh--h---------------------------------hHHHHH
Confidence 4689999999999975 268999999875421100 0 001133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHH
Q 005995 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (666)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~ 275 (666)
.|.+.+.++.+ ..|++++. ....++||||++|++|.+... ....++...+...+.
T Consensus 47 ~E~~~l~~l~h--------------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~ 105 (318)
T cd05582 47 MERDILAEVNH--------------------PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS-KEVMFTEEDVKFYLA 105 (318)
T ss_pred HHHHHHHhCCC--------------------CCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHH
Confidence 45555554432 22333332 445689999999998876532 122345555544444
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
++. +..+|..|++|+|+||.||+++ .++.++|+|||++....
T Consensus 106 qi~~~l~~lH~~~i~H~dlkp~Nil~~--~~~~~kL~Dfg~~~~~~ 149 (318)
T cd05582 106 ELALALDHLHSLGIIYRDLKPENILLD--EEGHIKLTDFGLSKESI 149 (318)
T ss_pred HHHHHHHHHHHCCEecCCCCHHHeEEC--CCCcEEEeeccCCcccC
Confidence 443 7789999999999999999998 45889999999987653
No 120
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.38 E-value=1.3e-12 Score=136.21 Aligned_cols=138 Identities=20% Similarity=0.227 Sum_probs=92.1
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
..||+|++|+||+|+.. +|+.||||+.+..... .+-.+.+|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-------------------------------------~~~~~~~e~ 68 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQ-------------------------------------RRELLFNEV 68 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchh-------------------------------------HHHHHHHHH
Confidence 45999999999999875 7999999975422110 001133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
..+..+.+ ++ +.....+. ....++||||++|.+|.++. .....+...+...+.+++
T Consensus 69 ~~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~ql~~~ 128 (292)
T cd06657 69 VIMRDYQH------------------ENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLKA 128 (292)
T ss_pred HHHHhcCC------------------cchhheeeEEEeCCEEEEEEecCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHH
Confidence 44433322 11 11222222 45668999999999987753 233345555555444443
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|++|.||+++. ++.++|+|||++..+..
T Consensus 129 l~~lH~~givH~dl~p~Nilv~~--~~~~~l~dfg~~~~~~~ 168 (292)
T cd06657 129 LSVLHAQGVIHRDIKSDSILLTH--DGRVKLSDFGFCAQVSK 168 (292)
T ss_pred HHHHHHCCeecCCCCHHHEEECC--CCCEEEcccccceeccc
Confidence 78899999999999999999984 58899999998876644
No 121
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.38 E-value=1.9e-12 Score=133.76 Aligned_cols=138 Identities=17% Similarity=0.157 Sum_probs=90.0
Q ss_pred cccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHHH
Q 005995 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (666)
Q Consensus 126 i~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 204 (666)
||+|++|+||+++.+ +|+.||+|+.......... .+-.+..|...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~----------------------------------~~~~~~~E~~i 46 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKS----------------------------------GEKMALLEKEI 46 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcch----------------------------------hhHHHHHHHHH
Confidence 689999999999975 7999999986432110000 00012224444
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHHHHHHH-
Q 005995 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~l~~~~- 278 (666)
+.++.+ + .|.+++ . ....++||||++|++|.+..... ..+.+...+...+.++.
T Consensus 47 l~~l~h------------------p--~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~ 106 (277)
T cd05607 47 LEKVNS------------------P--FIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITC 106 (277)
T ss_pred HHhcCC------------------C--cEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHH
Confidence 444322 2 233333 2 45568999999999987653221 12345554444444433
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|++|.||+++. ++.++|+|||++..+.
T Consensus 107 al~~lH~~~ivH~dikp~Nili~~--~~~~~l~Dfg~~~~~~ 146 (277)
T cd05607 107 GILHLHSMDIVYRDMKPENVLLDD--QGNCRLSDLGLAVELK 146 (277)
T ss_pred HHHHHHHCCEEEccCChHhEEEcC--CCCEEEeeceeeeecC
Confidence 77889999999999999999984 5889999999987664
No 122
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.38 E-value=5.5e-12 Score=142.39 Aligned_cols=141 Identities=21% Similarity=0.299 Sum_probs=96.4
Q ss_pred CccccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 122 VETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 122 ~~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
..+.||+|++|.||+|.. .++.+++|+..+.....-..+ .. ...-.+.+|
T Consensus 337 ~~~~iG~G~~g~Vy~~~~-~~~~~v~k~~~~~~~~~~~~~----------------------------~~-~~~~~~~~E 386 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEY-LGRDAVIKERVPKGYRHPELD----------------------------ER-LRTERTRAE 386 (535)
T ss_pred ccceeccCCcEEEEEEee-cCccceeEEEecccccchhHH----------------------------HH-HHHHHHHHH
Confidence 357899999999999987 456677776443211100000 00 011125678
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA 279 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l 279 (666)
++.+.++++ +++.+|.++. ....+|||||++|.+|.+... ....++..+.+ .+
T Consensus 387 ~~~l~~l~~------------------~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~------~~~~~~~~i~~-~L 441 (535)
T PRK09605 387 ARLLSEARR------------------AGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE------GNPELVRKVGE-IV 441 (535)
T ss_pred HHHHHhhcc------------------cCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH------HHHHHHHHHHH-HH
Confidence 888877754 2456676665 456799999999999887642 12344444444 36
Q ss_pred HHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 280 ~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
.++|..|++|+|+||+|||++ +++++|+|||+++..+.
T Consensus 442 ~~lH~~giiHrDlkp~NILl~---~~~~~liDFGla~~~~~ 479 (535)
T PRK09605 442 AKLHKAGIVHGDLTTSNFIVR---DDRLYLIDFGLGKYSDL 479 (535)
T ss_pred HHHHhCCCccCCCChHHEEEE---CCcEEEEeCcccccCCc
Confidence 789999999999999999994 47899999999988654
No 123
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.38 E-value=2.2e-12 Score=132.52 Aligned_cols=152 Identities=19% Similarity=0.180 Sum_probs=96.3
Q ss_pred ccccCccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhh
Q 005995 118 FMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (666)
Q Consensus 118 f~~~~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 196 (666)
|.++..++||+|++|+||+|... +|+.||||..+.........+.. ..+..+
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~---------------------~~~~~~------ 53 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSR---------------------QKDMVK------ 53 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchH---------------------HHHHHH------
Confidence 45566789999999999999865 79999999765322111000000 000001
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHH
Q 005995 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (666)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~ 272 (666)
.+..|+..+..+.+ ..+++++. ....++||||++|++|.+...-. ..++...+..
T Consensus 54 ~~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~ 112 (272)
T cd06629 54 ALRSEIETLKDLDH--------------------LNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRF 112 (272)
T ss_pred HHHHHHHHHHhcCC--------------------CCcceEEEEeccCCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHH
Confidence 13345544444422 22333432 35568999999999988764321 2334333333
Q ss_pred HHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 273 ~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.+.+++ +..+|..|++|+|++|+||+++ .++.++|+|||++....
T Consensus 113 ~~~qi~~~l~~lH~~~i~H~dl~~~nil~~--~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 113 FTEQVLEGLAYLHSKGILHRDLKADNLLVD--ADGICKISDFGISKKSD 159 (272)
T ss_pred HHHHHHHHHHHHhhCCeeecCCChhhEEEc--CCCeEEEeecccccccc
Confidence 223322 6788999999999999999998 46899999999987654
No 124
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.38 E-value=1.9e-12 Score=134.27 Aligned_cols=143 Identities=15% Similarity=0.124 Sum_probs=94.9
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|... +|+.||||+......... ..+..+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------~~~~~~~~E~ 51 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------------------------------KGEAMALNEK 51 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhh----------------------------------hhHHHHHHHH
Confidence 46899999999999965 799999998754321100 0112244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cCCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~l~~~~-- 278 (666)
..+.++.+. .-+.+...+. ....++||||++|++|.+..... ...++...+...+.+++
T Consensus 52 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~ 114 (285)
T cd05605 52 QILEKVNSR-----------------FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCG 114 (285)
T ss_pred HHHHhcCCC-----------------CEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHH
Confidence 555554320 0112222222 34568999999999987654321 12345555555444444
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|++|.||+++ .++.++|+|||++..+.
T Consensus 115 l~~lH~~~ivH~dlkp~Nil~~--~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05605 115 LEDLHRERIVYRDLKPENILLD--DYGHIRISDLGLAVEIP 153 (285)
T ss_pred HHHHHHCCcEecCCCHHHEEEC--CCCCEEEeeCCCceecC
Confidence 6788999999999999999998 45889999999988764
No 125
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.38 E-value=1.5e-12 Score=137.33 Aligned_cols=137 Identities=14% Similarity=0.170 Sum_probs=88.6
Q ss_pred ccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
.||+|++|.||+|+.. +|+.||||+.++..... ..+.. .+..|..
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~---------------------------------~~~~e~~ 47 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-DDDVE---------------------------------CTMVEKR 47 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-cchHH---------------------------------HHHHHHH
Confidence 5899999999999975 68899999987543100 00000 0112322
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+... + ++ ..|++++. ....++||||++|++|.+... .....+...+...+.++.
T Consensus 48 ~l~~~---~--------------~h--p~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~-~~~~~~~~~~~~~~~qi~~ 107 (316)
T cd05619 48 VLSLA---W--------------EH--PFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQ-SCHKFDLPRATFYAAEIIC 107 (316)
T ss_pred HHHhc---c--------------CC--CcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 22211 1 11 22333332 344679999999999876532 122344444444444433
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
+..+|..|++|+|+||.|||++ .++.++|+|||++..
T Consensus 108 al~~LH~~~ivHrdikp~Nil~~--~~~~~kl~Dfg~~~~ 145 (316)
T cd05619 108 GLQFLHSKGIVYRDLKLDNILLD--TDGHIKIADFGMCKE 145 (316)
T ss_pred HHHHHHhCCeEeCCCCHHHEEEC--CCCCEEEccCCcceE
Confidence 7889999999999999999998 458899999999875
No 126
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.38 E-value=2.3e-12 Score=133.69 Aligned_cols=143 Identities=15% Similarity=0.114 Sum_probs=96.0
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+..+....... .+..+.+|.
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~----------------------------------~~~~~~~E~ 51 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRK----------------------------------GESMALNEK 51 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhh----------------------------------HHHHHHHHH
Confidence 46999999999999875 7999999987553211000 011134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~~-- 278 (666)
+.+.++++. ..+.+...+. ....+++|||++|.+|.+...... .+++...+...+.+++
T Consensus 52 ~il~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~ 114 (285)
T cd05632 52 QILEKVNSQ-----------------FVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCG 114 (285)
T ss_pred HHHHHcCCc-----------------CceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 555555331 1122222332 345689999999998876543221 2355566555555544
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|+||+||+++ .++.++|+|||++..++
T Consensus 115 l~~lH~~~iiH~dikp~Nili~--~~~~~kl~Dfg~~~~~~ 153 (285)
T cd05632 115 LEDLHRENTVYRDLKPENILLD--DYGHIRISDLGLAVKIP 153 (285)
T ss_pred HHHHHhCCeeecCCCHHHEEEC--CCCCEEEecCCcceecC
Confidence 6888999999999999999998 45789999999987654
No 127
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.38 E-value=2.1e-12 Score=132.30 Aligned_cols=139 Identities=20% Similarity=0.204 Sum_probs=96.6
Q ss_pred ccccccceeeeeEEEEec----CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 123 ETPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~----~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
.+.||+|++|.||+|+.+ +...||||+.+++...... -+|
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~------------------------------------~~~ 52 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQR------------------------------------LDF 52 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHH------------------------------------HHH
Confidence 367999999999999975 2457999988765332111 113
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHH
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l 274 (666)
..|...+.++.+ ..+.+++. ....+++|||++|.+|.++.......++...+...+
T Consensus 53 ~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ 112 (266)
T cd05033 53 LTEASIMGQFDH--------------------PNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGML 112 (266)
T ss_pred HHHHHHHHhCCC--------------------CCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHH
Confidence 345555444422 12333332 455689999999999988754333345555555555
Q ss_pred HHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 275 ~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.+++ +..+|..|++|+|+||.||+++ +++.++|+|||++..+.
T Consensus 113 ~~l~~~l~~Lh~~~i~H~di~p~nili~--~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 113 RGIASGMKYLSEMNYVHRDLAARNILVN--SNLVCKVSDFGLSRRLE 157 (266)
T ss_pred HHHHHHHHHHHhCCcccCCCCcceEEEc--CCCCEEECccchhhccc
Confidence 5544 6788999999999999999998 45889999999998774
No 128
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.38 E-value=1.5e-12 Score=132.46 Aligned_cols=139 Identities=20% Similarity=0.269 Sum_probs=97.2
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||+|+....-....... ...+|.
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~-----------------------------------~~~~e~ 49 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEERE-----------------------------------ENIREI 49 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHH-----------------------------------HHHHHH
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccc-----------------------------------hhhhhh
Confidence 47999999999999976 677999999866432211100 011255
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
..+.++++ +. +.+-.++. ....+++||+++|.+|.++.. ....++...+...+.+++
T Consensus 50 ~~~~~l~~------------------~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~ 110 (260)
T PF00069_consen 50 KILRRLRH------------------PNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEA 110 (260)
T ss_dssp HHHHHHTB------------------TTBCHEEEEEEESSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHH
T ss_pred hccccccc------------------ccccccccccccccccccccccccccccccccc-cccccccccccccccccccc
Confidence 55555532 11 12222222 556689999999998887654 344556666666555554
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|++|.||+++ .+++++|+|||++..+
T Consensus 111 L~~Lh~~~i~H~dikp~NIl~~--~~~~~~l~Dfg~~~~~ 148 (260)
T PF00069_consen 111 LAYLHSKGIVHRDIKPENILLD--ENGEVKLIDFGSSVKL 148 (260)
T ss_dssp HHHHHHTTEEESSBSGGGEEES--TTSEEEESSGTTTEES
T ss_pred cccccccccccccccccccccc--cccccccccccccccc
Confidence 8899999999999999999999 4689999999998753
No 129
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.38 E-value=1.3e-12 Score=133.46 Aligned_cols=136 Identities=16% Similarity=0.190 Sum_probs=96.1
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||.|++|.||+|...+++.||||..+++-.. +-++.+|.+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~--------------------------------------~~~~~~e~~ 53 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD--------------------------------------PKDFLAEAQ 53 (261)
T ss_pred EEecccCCccEEEEEecCCeEEEEEeeCCCccc--------------------------------------HHHHHHHHH
Confidence 679999999999999878889999987754210 011344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~~ 278 (666)
.+.++.+ ..+++++ . ....+++|||++|.+|.+...... ...+...+...+.+++
T Consensus 54 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~ 113 (261)
T cd05068 54 IMKKLRH--------------------PKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVA 113 (261)
T ss_pred HHHHCCC--------------------CCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHH
Confidence 5555432 1222222 2 455689999999999987643211 2345555555555544
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|+||+||+++ .++.++|+|||++..+.
T Consensus 114 ~~l~~lH~~~i~H~dl~p~Nil~~--~~~~~~l~dfg~~~~~~ 154 (261)
T cd05068 114 SGMAYLEAQNYIHRDLAARNVLVG--ENNICKVADFGLARVIK 154 (261)
T ss_pred HHHHHHHhCCeeeccCCcceEEEc--CCCCEEECCcceEEEcc
Confidence 7788999999999999999999 45889999999998775
No 130
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.38 E-value=2.1e-12 Score=133.33 Aligned_cols=138 Identities=19% Similarity=0.197 Sum_probs=93.4
Q ss_pred cccccceeeeeEEEEec-CCC----EEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 124 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~----~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
+.||+|++|.||+|+.. +|+ +||||+.+........ -++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~------------------------------------~~~ 56 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKAN------------------------------------KEI 56 (279)
T ss_pred eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHH------------------------------------HHH
Confidence 57999999999999854 565 4899987643321111 113
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHH
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~ 275 (666)
.+|...+..+.+ ..+++++. ....+++|||++|+++.+........++...+...+.
T Consensus 57 ~~e~~~l~~~~~--------------------~~i~~~~~~~~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~ 116 (279)
T cd05109 57 LDEAYVMAGVGS--------------------PYVCRLLGICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCV 116 (279)
T ss_pred HHHHHHHHhcCC--------------------CCCceEEEEEcCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHH
Confidence 334444333321 22333332 4556899999999998776432222345555555555
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
++. +..+|..|++|+|+||+||+++ .++.++|+|||++..++
T Consensus 117 qi~~~L~~lH~~~iiH~dlkp~Nil~~--~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 117 QIAKGMSYLEEVRLVHRDLAARNVLVK--SPNHVKITDFGLARLLD 160 (279)
T ss_pred HHHHHHHHHHHCCeeccccccceEEEc--CCCcEEECCCCceeecc
Confidence 554 7888999999999999999998 45789999999988765
No 131
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.37 E-value=1.1e-12 Score=137.70 Aligned_cols=138 Identities=15% Similarity=0.148 Sum_probs=88.5
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.+ +++.||||+.+...... .+..+.+|.
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~E~ 55 (309)
T cd07872 12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG------------------------------------APCTAIREV 55 (309)
T ss_pred EEecccCCEEEEEEEecCCCCeEEEEEeeccccCC------------------------------------cchhHHHHH
Confidence 57999999999999975 78899999875432110 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
..+.++++ ++ +.+-..+. ....++||||+++ ++.+.........+...+...+.++.
T Consensus 56 ~~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~a 116 (309)
T cd07872 56 SLLKDLKH------------------ANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRG 116 (309)
T ss_pred HHHHhCCC------------------CCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 55554432 11 12222222 4557899999987 44443221112234444433333333
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|+||+||+++ .++.++|+|||++...
T Consensus 117 L~~lH~~~ivH~dlkp~Nill~--~~~~~kl~Dfg~~~~~ 154 (309)
T cd07872 117 LAYCHRRKVLHRDLKPQNLLIN--ERGELKLADFGLARAK 154 (309)
T ss_pred HHHHHHCCeecCCCCHHHEEEC--CCCCEEECccccceec
Confidence 7789999999999999999998 4588999999998754
No 132
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.37 E-value=2.3e-12 Score=143.73 Aligned_cols=139 Identities=19% Similarity=0.144 Sum_probs=94.5
Q ss_pred ccccccceeeeeEEEEec-C-CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHH
Q 005995 123 ETPLATASIAQVHRATLV-D-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~-~-g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 200 (666)
.+.+|.|++|.||+|... + ++.||+|....+.... ...+++
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~-------------------------------------~~~~~~ 114 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQ-------------------------------------AAYARS 114 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHH-------------------------------------HHHHHH
Confidence 356999999999999864 4 6789999653321110 001334
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHH---HcCCCHHHHHHH
Q 005995 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEE 273 (666)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~~~~~ 273 (666)
|+..+..+.| ..|++++. ....+|||||++|++|.+..... ...++...+...
T Consensus 115 E~~~l~~l~H--------------------pniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i 174 (478)
T PTZ00267 115 ELHCLAACDH--------------------FGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLL 174 (478)
T ss_pred HHHHHHhCCC--------------------CCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHH
Confidence 5555554432 33555543 45679999999999998753211 112444444444
Q ss_pred HHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 274 l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+.++. +..+|..|++|||+||.|||++ +++.++|+|||++..+..
T Consensus 175 ~~qi~~aL~~lH~~~ivHrDlkp~NIll~--~~~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 175 FYQIVLALDEVHSRKMMHRDLKSANIFLM--PTGIIKLGDFGFSKQYSD 221 (478)
T ss_pred HHHHHHHHHHHHhCCEEECCcCHHhEEEC--CCCcEEEEeCcCceecCC
Confidence 44433 7889999999999999999998 468999999999987754
No 133
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.37 E-value=2.6e-12 Score=137.25 Aligned_cols=145 Identities=19% Similarity=0.206 Sum_probs=104.2
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.+|.|.||+||+++.+ +|+.+|+|+........-. ..-+..+|.
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~----------------------------------~~~~v~~Ev 86 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKE----------------------------------DREDVRREV 86 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccc----------------------------------cHHHHHHHH
Confidence 57999999999999987 5999999987432211000 111345677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--H
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l 279 (666)
+.++++.. ...-+.++.+|. ....+||||+++|+.|-+...-. .+.....+..+.+.. +
T Consensus 87 ~il~~l~~----------------hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av 148 (382)
T KOG0032|consen 87 AILQQLSG----------------HPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAV 148 (382)
T ss_pred HHHHhccC----------------CCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHH
Confidence 77776652 122467788886 56678999999999988764322 355555554444443 8
Q ss_pred HHhhhcCccccCCCcCceEEeeCC--CCceEEEecccccccCH
Q 005995 280 HQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSS 320 (666)
Q Consensus 280 ~~i~~~g~~H~D~hPgNilv~~~~--~~~i~liDFG~~~~l~~ 320 (666)
+++|..|++|+|+||+|+|+.... +++++++|||++..+..
T Consensus 149 ~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 149 KYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred HHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 889999999999999999998542 35899999999998876
No 134
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.37 E-value=1e-12 Score=139.51 Aligned_cols=138 Identities=17% Similarity=0.191 Sum_probs=107.3
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+-||+|-||.||.|.+....+||||.++++.. .+-+|.+||.
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m--------------------------------------~~~~f~~Ea~ 253 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM--------------------------------------SPEAFLREAQ 253 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEecccc--------------------------------------ChhHHHHHHH
Confidence 46899999999999996556999999988621 2234778999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cCC---CeeEeeecCCccCCChhhH-HHcCCCHHHHHHHHHHHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSE---TVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~~---~vLvmE~i~G~~L~~~~~~-~~~~~~~~~~~~~l~~~~ 278 (666)
.+.+++| -.+-+.|. |+. .+|||||++-++|.++..- ....++..+++.-..+++
T Consensus 254 iMk~L~H--------------------~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIa 313 (468)
T KOG0197|consen 254 IMKKLRH--------------------EKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIA 313 (468)
T ss_pred HHHhCcc--------------------cCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHH
Confidence 9999876 23444554 332 5899999999999988654 234566677777777776
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+..+-..++|||||-..||||++ ++.+++.|||+++.+.++
T Consensus 314 eGM~YLes~~~IHRDLAARNiLV~~--~~~vKIsDFGLAr~~~d~ 356 (468)
T KOG0197|consen 314 EGMAYLESKNYIHRDLAARNILVDE--DLVVKISDFGLARLIGDD 356 (468)
T ss_pred HHHHHHHhCCccchhhhhhheeecc--CceEEEcccccccccCCC
Confidence 77788899999999999999994 578999999999965543
No 135
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.37 E-value=3e-12 Score=132.11 Aligned_cols=145 Identities=14% Similarity=0.170 Sum_probs=98.7
Q ss_pred hhccccccCccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhc
Q 005995 114 MGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (666)
Q Consensus 114 ~~~~f~~~~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~ 192 (666)
+++.|.... .||+|++|.||+|... +|+.||||+.........
T Consensus 2 ~~~~~~~~~--~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~---------------------------------- 45 (277)
T cd06641 2 PEELFTKLE--KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE---------------------------------- 45 (277)
T ss_pred HHHhhhhhe--eEeecCCeEEEEEEECCCCcEEEEEEeccccchHH----------------------------------
Confidence 345665444 5999999999999864 789999998643211000
Q ss_pred hhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHH
Q 005995 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQ 268 (666)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~ 268 (666)
.-++.+|...+.++.+ + .+.+++ . ....++||||++|.+|.+.. .....+..
T Consensus 46 --~~~~~~e~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i--~~~~~~~~ 101 (277)
T cd06641 46 --IEDIQQEITVLSQCDS------------------P--YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDET 101 (277)
T ss_pred --HHHHHHHHHHHHhcCC------------------C--CEeEEEEEEEeCCeEEEEEEeCCCCcHHHHH--hcCCCCHH
Confidence 0124445555544432 1 223333 2 45679999999999887653 33445555
Q ss_pred HHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 269 ~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
.+...+.+++ +..+|..|++|+|++|+||+++ .++.++++|||++..+..
T Consensus 102 ~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~--~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06641 102 QIATILREILKGLDYLHSEKKIHRDIKAANVLLS--EHGEVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHHHHHHHHHHHHHccCCeecCCCCHHhEEEC--CCCCEEEeecccceeccc
Confidence 5555555544 6788999999999999999998 458899999999887654
No 136
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.37 E-value=2.6e-12 Score=132.87 Aligned_cols=138 Identities=20% Similarity=0.220 Sum_probs=93.4
Q ss_pred cccccceeeeeEEEEec-----CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 124 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-----~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
+.||+|++|.||+|+.. +|+.||||+.+....... -.+
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~-------------------------------------~~~ 52 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHL-------------------------------------RDF 52 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHH-------------------------------------HHH
Confidence 57999999999999742 688999998765432110 013
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee------cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHH
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~ 272 (666)
.+|.+.+.++.+ + .+++.+. ....++||||++|++|.++.......++...+..
T Consensus 53 ~~e~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~ 112 (284)
T cd05081 53 EREIEILKSLQH------------------D--NIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLL 112 (284)
T ss_pred HHHHHHHHhCCC------------------C--CeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHH
Confidence 345554444432 2 2233221 1245799999999999877432222344454444
Q ss_pred HHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 273 ~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
.+.++. +..+|..|++|+|+||.||+++ ++++++|+|||++..++.
T Consensus 113 ~~~~l~~aL~~LH~~~i~H~dlkp~nili~--~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 113 YASQICKGMEYLGSKRYVHRDLATRNILVE--SENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred HHHHHHHHHHHHHHCCceeccCCHhhEEEC--CCCeEEECCCcccccccC
Confidence 444443 7788999999999999999998 458899999999887643
No 137
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.36 E-value=2.8e-12 Score=132.32 Aligned_cols=144 Identities=15% Similarity=0.178 Sum_probs=97.4
Q ss_pred hccccccCccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhch
Q 005995 115 GGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 193 (666)
Q Consensus 115 ~~~f~~~~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~ 193 (666)
++.|... +.||+|++|+||+|+.. +|+.||||+........
T Consensus 3 ~~~y~~~--~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~------------------------------------ 44 (277)
T cd06640 3 EELFTKL--ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED------------------------------------ 44 (277)
T ss_pred HHhhhhh--hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHH------------------------------------
Confidence 3444433 46999999999999975 68999999865321100
Q ss_pred hhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHH
Q 005995 194 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQK 269 (666)
Q Consensus 194 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ 269 (666)
..-++.+|...+.++.+ ..+++++. ....++||||++|++|.+.. .....+...
T Consensus 45 ~~~~~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i--~~~~l~~~~ 102 (277)
T cd06640 45 EIEDIQQEITVLSQCDS--------------------PYVTKYYGSYLKGTKLWIIMEYLGGGSALDLL--RAGPFDEFQ 102 (277)
T ss_pred HHHHHHHHHHHHHhCCC--------------------CCEeeEEEEEEECCEEEEEEecCCCCcHHHHH--hcCCCCHHH
Confidence 01123445544444322 23344432 45679999999999987763 334455555
Q ss_pred HHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 270 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 270 ~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+...+.+++ +..+|..|++|+|++|+||+++ .++.++++|||++..+..
T Consensus 103 ~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~--~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06640 103 IATMLKEILKGLDYLHSEKKIHRDIKAANVLLS--EQGDVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc--CCCCEEEcccccceeccC
Confidence 555444443 6778999999999999999998 458899999999877654
No 138
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.36 E-value=2.4e-12 Score=131.09 Aligned_cols=136 Identities=20% Similarity=0.210 Sum_probs=93.9
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||+|++|.||+|+.+++..||+|..+.+-. .+-+|.+|+.
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~--------------------------------------~~~~~~~e~~ 51 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGAM--------------------------------------SEEDFIEEAK 51 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccCCc--------------------------------------cHHHHHHHHH
Confidence 46999999999999998888999997654311 0112445555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+.++.+ + .+.+++. ....++||||++|++|.+........++...+...+.++.
T Consensus 52 ~l~~l~h------------------~--~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~ 111 (256)
T cd05114 52 VMMKLSH------------------P--KLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCE 111 (256)
T ss_pred HHHHCCC------------------C--CceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHH
Confidence 5555432 1 2223332 3456899999999999876432222345444444444433
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|++|+||+++ .++.++|+|||.+..+.
T Consensus 112 ~l~~lH~~~i~H~dl~p~ni~i~--~~~~~kl~d~g~~~~~~ 151 (256)
T cd05114 112 GMEYLERNSFIHRDLAARNCLVS--STGVVKVSDFGMTRYVL 151 (256)
T ss_pred HHHHHHHCCccccccCcceEEEc--CCCeEEECCCCCccccC
Confidence 6788999999999999999998 45889999999987653
No 139
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.36 E-value=1.4e-12 Score=134.56 Aligned_cols=144 Identities=15% Similarity=0.182 Sum_probs=94.5
Q ss_pred hccccccCccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhch
Q 005995 115 GGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 193 (666)
Q Consensus 115 ~~~f~~~~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~ 193 (666)
.+.|..+ +.||+|++|.||+|... +|+.||||+.+.........
T Consensus 3 ~~~y~~~--~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~--------------------------------- 47 (277)
T cd06642 3 EELFTKL--ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIE--------------------------------- 47 (277)
T ss_pred HHHHHHH--HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHH---------------------------------
Confidence 3445443 45999999999999865 68899999875432111100
Q ss_pred hhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHH
Q 005995 194 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQK 269 (666)
Q Consensus 194 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ 269 (666)
++.+|...+.++.+ ..+++++. ....++||||++|.+|.+.. .....+...
T Consensus 48 ---~~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~ 102 (277)
T cd06642 48 ---DIQQEITVLSQCDS--------------------PYITRYYGSYLKGTKLWIIMEYLGGGSALDLL--KPGPLEETY 102 (277)
T ss_pred ---HHHHHHHHHHcCCC--------------------CccHhhhcccccCCceEEEEEccCCCcHHHHh--hcCCCCHHH
Confidence 13334444443322 12222221 34568999999999887653 333344444
Q ss_pred HHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 270 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 270 ~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+...+.++. +..+|..|++|+|+||+||+++ .++.++|+|||++..+..
T Consensus 103 ~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~--~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06642 103 IATILREILKGLDYLHSERKIHRDIKAANVLLS--EQGDVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHHHHHHHHHHHHhcCCeeccCCChheEEEe--CCCCEEEccccccccccC
Confidence 444444433 6678899999999999999998 458899999999987754
No 140
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.36 E-value=2.3e-12 Score=131.30 Aligned_cols=136 Identities=18% Similarity=0.176 Sum_probs=94.8
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||+|++|.||.|+..++..||||..+++-.. +-+|.+|..
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--------------------------------------EDEFIEEAK 51 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCccc--------------------------------------HHHHHHHHH
Confidence 469999999999999877778999976543110 011344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+.++.+ ..+++++. ....+++|||++|++|.+.........+...+...+.++.
T Consensus 52 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~ 111 (256)
T cd05113 52 VMMKLSH--------------------EKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCE 111 (256)
T ss_pred HHhcCCC--------------------CCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 5444322 23445543 3446899999999988876433222355555555555544
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|+||+||+++ +++.++|+|||++..+.
T Consensus 112 ~l~~lH~~~i~H~dl~p~nili~--~~~~~kl~d~g~~~~~~ 151 (256)
T cd05113 112 GMAYLESKQFIHRDLAARNCLVD--DQGCVKVSDFGLSRYVL 151 (256)
T ss_pred HHHHHHhCCeeccccCcceEEEc--CCCCEEECCCccceecC
Confidence 6788999999999999999998 45899999999987653
No 141
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.36 E-value=3.5e-12 Score=129.29 Aligned_cols=138 Identities=17% Similarity=0.186 Sum_probs=94.3
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||.|++|.||+|...+|+.||+|+.+....... .-.+.+|.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~------------------------------------~~~~~~e~~ 44 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDL------------------------------------KRKFLQEAE 44 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHH------------------------------------HHHHHHHHH
Confidence 36899999999999987799999998654322100 001334544
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+.++.+ + .+++++. ....++||||++|.+|.++........+...+...+.++.
T Consensus 45 ~l~~l~~------------------~--~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 104 (251)
T cd05041 45 ILKQYDH------------------P--NIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAA 104 (251)
T ss_pred HHHhCCC------------------C--CeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 4444321 2 2333332 4567999999999998876432222345555555444433
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|++|.||+++ .+++++|+|||++....
T Consensus 105 ~l~~lH~~~i~h~di~p~nili~--~~~~~~l~d~g~~~~~~ 144 (251)
T cd05041 105 GMEYLESKNCIHRDLAARNCLVG--ENNVLKISDFGMSREEE 144 (251)
T ss_pred HHHHHHhCCEehhhcCcceEEEc--CCCcEEEeecccccccc
Confidence 6788999999999999999998 45899999999987654
No 142
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.36 E-value=3.3e-12 Score=130.32 Aligned_cols=139 Identities=19% Similarity=0.199 Sum_probs=95.8
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||.|++|+||+|...++..||+|..+++.... -++.+|..
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~--------------------------------------~~~~~E~~ 53 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSP--------------------------------------ESFLEEAQ 53 (260)
T ss_pred heeccccCceEEEEEecCCceeEEEEecCCCCCH--------------------------------------HHHHHHHH
Confidence 4699999999999998888899999887642210 01444555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeeecCCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHHHHHHH--H
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--A 279 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~l~~~~--l 279 (666)
.+.++.+ ++ +.+.........+++|||++|.+|.+..... ...++...+...+.+++ +
T Consensus 54 ~l~~l~~------------------~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al 115 (260)
T cd05070 54 IMKKLRH------------------DKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGM 115 (260)
T ss_pred HHHhcCC------------------CceEEEEeEECCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence 5555432 11 2222222355679999999999988764321 11244444444444433 6
Q ss_pred HHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 280 ~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
..+|..|++|+|++|.||+++ .++.++|+|||.+..+..
T Consensus 116 ~~lH~~~i~H~di~p~Nili~--~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 116 AYIERMNYIHRDLRSANILVG--DGLVCKIADFGLARLIED 154 (260)
T ss_pred HHHHHCCcccCCCccceEEEe--CCceEEeCCceeeeeccC
Confidence 788999999999999999998 457899999999987643
No 143
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.36 E-value=5.5e-12 Score=130.42 Aligned_cols=78 Identities=19% Similarity=0.182 Sum_probs=58.8
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
....++||||++|++|.+... ....++...+...+.++. +..+|..|++|+|+||+||+++ .++.++|+|||++.
T Consensus 69 ~~~~~lv~e~~~~~~L~~~i~-~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~--~~~~~~l~dfg~~~ 145 (279)
T cd05633 69 PDKLCFILDLMNGGDLHYHLS-QHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLD--EHGHVRISDLGLAC 145 (279)
T ss_pred CCeEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEEC--CCCCEEEccCCcce
Confidence 345689999999999976532 122345555555444443 7889999999999999999998 45899999999987
Q ss_pred ccC
Q 005995 317 KLS 319 (666)
Q Consensus 317 ~l~ 319 (666)
.++
T Consensus 146 ~~~ 148 (279)
T cd05633 146 DFS 148 (279)
T ss_pred ecc
Confidence 654
No 144
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.36 E-value=2.3e-12 Score=135.90 Aligned_cols=137 Identities=15% Similarity=0.156 Sum_probs=89.8
Q ss_pred ccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
-||+|++|.||+|+.+ +|+.||||+.+......- .+. -.+..|.+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~---------------------------------~~~~~e~~ 47 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQD-DDV---------------------------------ECTMTEKR 47 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhh-hHH---------------------------------HHHHHHHH
Confidence 4899999999999976 688999998764321000 000 00222333
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+..+.+ +..+++++. ....++||||++|++|.+... ....++...+...+.++.
T Consensus 48 il~~~~~-------------------h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~qi~~ 107 (318)
T cd05570 48 VLALAGK-------------------HPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQ-RSGRFDEPRARFYAAEIVL 107 (318)
T ss_pred HHHhccC-------------------CCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 3332211 123444442 345689999999998876532 222455555554444443
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
+..+|..|++|+|+||.||+++ .++.++|+|||+++.
T Consensus 108 ~l~~LH~~~ivH~dlkp~Nill~--~~~~~kl~Dfg~~~~ 145 (318)
T cd05570 108 GLQFLHERGIIYRDLKLDNVLLD--SEGHIKIADFGMCKE 145 (318)
T ss_pred HHHHHHhCCeEccCCCHHHeEEC--CCCcEEecccCCCee
Confidence 6788999999999999999998 458999999998864
No 145
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.36 E-value=3.5e-12 Score=130.25 Aligned_cols=138 Identities=19% Similarity=0.185 Sum_probs=93.0
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
..||+|++|+||+|...++..||+|+.+++-.. +-++.+|.+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~--------------------------------------~~~~~~E~~ 53 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM--------------------------------------PEAFLQEAQ 53 (260)
T ss_pred eeecCcCCCeEEEEEEcCCceEEEEEcccCCcc--------------------------------------HHHHHHHHH
Confidence 469999999999999877778999987664210 001334555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeeecCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHHH--H
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--A 279 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~~--l 279 (666)
.+.++.+ ++ +.+...+.....+++|||++|++|.+...... ...+...+...+.++. +
T Consensus 54 ~l~~l~h------------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al 115 (260)
T cd05069 54 IMKKLRH------------------DKLVPLYAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGM 115 (260)
T ss_pred HHHhCCC------------------CCeeeEEEEEcCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHH
Confidence 5544432 11 22222222455789999999999877643211 1234444444443333 6
Q ss_pred HHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 280 ~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
..+|..|++|+|+||+||+++ +++.++|+|||.+..+.
T Consensus 116 ~~lH~~~i~H~dl~~~Nill~--~~~~~~l~dfg~~~~~~ 153 (260)
T cd05069 116 AYIERMNYIHRDLRAANILVG--DNLVCKIADFGLARLIE 153 (260)
T ss_pred HHHHhCCEeecccCcceEEEc--CCCeEEECCCccceEcc
Confidence 788999999999999999998 45889999999987664
No 146
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.35 E-value=2.6e-12 Score=130.68 Aligned_cols=136 Identities=19% Similarity=0.221 Sum_probs=94.1
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||+|++|+||+|...+++.+|||+.+.+... +-+|..|.+
T Consensus 10 ~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS--------------------------------------EEDFIEEAQ 51 (256)
T ss_pred eeecCcccceEEEEEEeCCCeEEEEECCCCCCC--------------------------------------HHHHHHHHH
Confidence 579999999999999877889999987643211 112444555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+.++.+ ..+++++. ....+++|||++|++|.+........+....+...+.++.
T Consensus 52 ~l~~l~~--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~ 111 (256)
T cd05112 52 VMMKLSH--------------------PKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCE 111 (256)
T ss_pred HHHhCCC--------------------CCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHH
Confidence 5555422 12333332 4567899999999998776432222244444444444433
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|+||+||+++ .++.++|+|||++....
T Consensus 112 ~l~~lH~~~i~h~dl~p~ni~i~--~~~~~~l~d~g~~~~~~ 151 (256)
T cd05112 112 GMAYLESSNVIHRDLAARNCLVG--ENQVVKVSDFGMTRFVL 151 (256)
T ss_pred HHHHHHHCCccccccccceEEEc--CCCeEEECCCcceeecc
Confidence 6778999999999999999998 45789999999987653
No 147
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.35 E-value=2.5e-12 Score=131.01 Aligned_cols=136 Identities=18% Similarity=0.210 Sum_probs=93.7
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||+|++|.||+|..+++..+|||+.+++... +-++..|..
T Consensus 10 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05059 10 KELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS--------------------------------------EDDFIEEAK 51 (256)
T ss_pred hhhccCCCceEEEeEecCCccEEEEEeccCCCC--------------------------------------HHHHHHHHH
Confidence 569999999999999877789999987543210 001333444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+.++.+ ..+++.+. ....++||||++|.+|.+.........+...+...+.++.
T Consensus 52 ~l~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 111 (256)
T cd05059 52 VMMKLSH--------------------PNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCE 111 (256)
T ss_pred HHHhCCC--------------------CCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 4443321 22344442 4556899999999998876433222344555444444443
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|+||.||+++ .++.++|+|||++....
T Consensus 112 ~l~~lH~~~i~H~dl~p~ni~i~--~~~~~kl~dfg~~~~~~ 151 (256)
T cd05059 112 AMEYLESNGFIHRDLAARNCLVG--EDNVVKVSDFGLARYVL 151 (256)
T ss_pred HHHHHHHCCcccccccHhhEEEC--CCCcEEECCcccceecc
Confidence 6788999999999999999998 45889999999987653
No 148
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.35 E-value=3.6e-12 Score=132.00 Aligned_cols=140 Identities=21% Similarity=0.232 Sum_probs=93.6
Q ss_pred cccccceeeeeEEEEe-----cCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l-----~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
+.||+|++|.||.|+. .+|+.||||..++........ ++
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~------------------------------------~~ 53 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA------------------------------------DL 53 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHH------------------------------------HH
Confidence 3599999999999974 268899999887653221110 13
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-c--CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHH
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l 274 (666)
.+|...+.++.+ ++ +.+..... . ...++||||++|.+|.++........+...+...+
T Consensus 54 ~~e~~~l~~l~h------------------~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~ 115 (284)
T cd05079 54 KKEIEILRNLYH------------------ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYA 115 (284)
T ss_pred HHHHHHHHhCCC------------------CCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHH
Confidence 345555544432 11 11222222 1 33579999999999988743222234555555544
Q ss_pred HHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 275 ~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.++. +..+|..|++|+|+||.||+++ .++.++|+|||++..+.
T Consensus 116 ~~i~~aL~~lH~~gi~H~dlkp~Nil~~--~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 116 VQICKGMDYLGSRQYVHRDLAARNVLVE--SEHQVKIGDFGLTKAIE 160 (284)
T ss_pred HHHHHHHHHHHHCCeeecccchheEEEc--CCCCEEECCCccccccc
Confidence 4443 7889999999999999999998 45889999999988764
No 149
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.35 E-value=3.5e-12 Score=135.52 Aligned_cols=137 Identities=20% Similarity=0.194 Sum_probs=92.2
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+.. +|+.||+|+.+........ -++.+|.
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------------~~~~~E~ 54 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIR------------------------------------NQIIREL 54 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHH------------------------------------HHHHHHH
Confidence 46999999999999976 7899999987654322111 0134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+..+.+ ..|++++ . ....+|||||++|++|.++... ....+...+.....++.
T Consensus 55 ~~l~~l~h--------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~ 113 (333)
T cd06650 55 QVLHECNS--------------------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVI 113 (333)
T ss_pred HHHHHCCC--------------------CcccceeEEEEECCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 56555432 1233332 2 4567899999999999887432 12234443333333332
Q ss_pred --HHHhhh-cCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~-~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|. +|++|+|+||+|||++ .++.++|+|||++..+.
T Consensus 114 ~~l~~lH~~~~ivH~dlkp~Nili~--~~~~~kL~Dfg~~~~~~ 155 (333)
T cd06650 114 KGLTYLREKHKIMHRDVKPSNILVN--SRGEIKLCDFGVSGQLI 155 (333)
T ss_pred HHHHHHHhcCCEEecCCChhhEEEc--CCCCEEEeeCCcchhhh
Confidence 566776 5899999999999998 45889999999987653
No 150
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.35 E-value=1.2e-12 Score=133.17 Aligned_cols=140 Identities=21% Similarity=0.256 Sum_probs=94.1
Q ss_pred cccccceeeeeEEEEe-cCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l-~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.+|+|.+|.|-+|+. ..|+.||||.+|.+--+. +.|+- ..++|.
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkd-eqDlv---------------------------------hIRREI 104 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKD-EQDLV---------------------------------HIRREI 104 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhccc-HHHHH---------------------------------HHHHHH
Confidence 4699999999999996 589999999765432110 11211 134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHH---HHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQK---VVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~---~~~~l~~~~ 278 (666)
+.+..+.| ..-+.|-+|+. .++-||||||..|+.|.|+...+ ..+...+ +.+.++.+
T Consensus 105 eIMSsLNH-----------------PhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvSA- 165 (668)
T KOG0611|consen 105 EIMSSLNH-----------------PHIIQIYEVFENKDKIVIVMEYASGGELYDYISER-GSLSEREARHFFRQIVSA- 165 (668)
T ss_pred HHHhhcCC-----------------CceeehhhhhcCCceEEEEEEecCCccHHHHHHHh-ccccHHHHHHHHHHHHHH-
Confidence 55544432 11233445555 67779999999999999986432 2233222 22222222
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
.+..|.++++|||+|-.|||++ .++.++|.|||++-.+
T Consensus 166 VhYCHknrVvHRDLKLENILLD--~N~NiKIADFGLSNly 203 (668)
T KOG0611|consen 166 VHYCHKNRVVHRDLKLENILLD--QNNNIKIADFGLSNLY 203 (668)
T ss_pred HHHHhhccceecccchhheeec--CCCCeeeeccchhhhh
Confidence 5567889999999999999999 4589999999998765
No 151
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.35 E-value=7.1e-12 Score=132.14 Aligned_cols=159 Identities=19% Similarity=0.186 Sum_probs=103.9
Q ss_pred HHHHHhCCChhccccccCccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHH
Q 005995 105 TIEREFGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNP 183 (666)
Q Consensus 105 ~l~~~~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~ 183 (666)
+...-++.++++.|... +.||+|++|+||+|+.. +|+.||||+....-....
T Consensus 14 ~~~~~~~~~~~~~f~~~--~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~------------------------- 66 (317)
T cd06635 14 IAELFFKEDPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSN------------------------- 66 (317)
T ss_pred HHHHhcCCCchhhhhhh--heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCch-------------------------
Confidence 44556778888887743 46999999999999965 789999998753211000
Q ss_pred HHHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-cCCCeeEeeecCCccCCChhhHH
Q 005995 184 IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLE 261 (666)
Q Consensus 184 ~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~ 261 (666)
+ ...++..|++.+.++.+ ++ +.+...+. ....++||||++| ++.+.....
T Consensus 67 ---~------~~~~~~~e~~~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~ 118 (317)
T cd06635 67 ---E------KWQDIIKEVKFLQRIKH------------------PNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVH 118 (317)
T ss_pred ---H------HHHHHHHHHHHHHhCCC------------------CCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHh
Confidence 0 00123445555554432 11 22222222 4566899999987 555543333
Q ss_pred HcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 262 AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 262 ~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
...++...+...+.+++ +..+|..|++|+|++|+||+++ .++.++|+|||++...+.
T Consensus 119 ~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~--~~~~~kl~dfg~~~~~~~ 177 (317)
T cd06635 119 KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT--EPGQVKLADFGSASIASP 177 (317)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEEC--CCCCEEEecCCCccccCC
Confidence 33455555555444443 6788999999999999999998 458899999999876543
No 152
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.35 E-value=3.6e-12 Score=129.47 Aligned_cols=140 Identities=19% Similarity=0.217 Sum_probs=98.2
Q ss_pred cccccceeeeeEEEEecC----CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHH
Q 005995 124 TPLATASIAQVHRATLVD----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~----g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 199 (666)
+.||+|++|.||+|+..+ +..|+||+.++....... -++.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~ 44 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEER------------------------------------KDFL 44 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHH------------------------------------HHHH
Confidence 368999999999999763 889999998765432200 0133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHH--------HcCCCH
Q 005995 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE--------AFGVNK 267 (666)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~--------~~~~~~ 267 (666)
.|.+.+.++.+ ..+++++. ....+++|||++|.+|.+..... ....+.
T Consensus 45 ~e~~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 104 (262)
T cd00192 45 KEARVMKKLGH--------------------PNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSL 104 (262)
T ss_pred HHHHHHhhcCC--------------------CChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCH
Confidence 45555444432 22233332 35568999999999998875432 234555
Q ss_pred HHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 268 ~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
..+...+.+++ +..+|..|++|+|++|.||+++. ++.++|+|||.+..+...
T Consensus 105 ~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~--~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 105 KDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGE--DLVVKISDFGLSRDVYDD 158 (262)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECC--CCcEEEcccccccccccc
Confidence 66666555544 78899999999999999999994 589999999999877543
No 153
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.35 E-value=3.9e-12 Score=133.24 Aligned_cols=137 Identities=12% Similarity=0.112 Sum_probs=90.1
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.+|+|++|.||+|+.. +++.||||...++.... ... . -++.+|.
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-~~~---------------------------~------~~~~~e~ 52 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL-RNQ---------------------------I------QQVFVER 52 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh-HHH---------------------------H------HHHHHHH
Confidence 57999999999999975 68999999865431100 000 0 0133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+..+++ ..|++++. ....++||||++|++|.++.... ..+....+...+.+++
T Consensus 53 ~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~ 111 (305)
T cd05609 53 DILTFAEN--------------------PFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNI-GALPVDMARMYFAETV 111 (305)
T ss_pred HHHHhCCC--------------------CCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 44433221 24445553 23348999999999998774321 2233333333333332
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
+..+|..|++|+|+||+||+++ .++.++|+|||+++.
T Consensus 112 ~~l~~lH~~~i~H~dl~p~NIll~--~~~~~~l~dfg~~~~ 150 (305)
T cd05609 112 LALEYLHNYGIVHRDLKPDNLLIT--SMGHIKLTDFGLSKI 150 (305)
T ss_pred HHHHHHHHCCccccCCchHHEEEC--CCCCEEEeeCCCccc
Confidence 7888999999999999999998 458999999998763
No 154
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.35 E-value=5.2e-12 Score=137.34 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=34.6
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|+||.|||++. ++.++|+|||+++.+.
T Consensus 250 L~~LH~~~ivH~dikp~Nill~~--~~~~kL~DfGla~~~~ 288 (400)
T cd05105 250 MEFLASKNCVHRDLAARNVLLAQ--GKIVKICDFGLARDIM 288 (400)
T ss_pred HHHHHhCCeeCCCCChHhEEEeC--CCEEEEEeCCcceecc
Confidence 67889999999999999999984 5789999999987653
No 155
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.35 E-value=3.7e-12 Score=130.55 Aligned_cols=140 Identities=21% Similarity=0.219 Sum_probs=94.2
Q ss_pred ccccccceeeeeEEEEec-CCC---EEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 123 ETPLATASIAQVHRATLV-DGR---QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~-~g~---~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
.+.||+|++|+||+|+++ +|+ .||||..+++....... ++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~------------------------------------~~ 53 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQ------------------------------------DF 53 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHH------------------------------------HH
Confidence 367999999999999975 343 79999877653211110 13
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHH
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l 274 (666)
..|++.+.++.+ ..+.++.. ....++||||++|.+|.+........++...+...+
T Consensus 54 ~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ 113 (268)
T cd05063 54 LSEASIMGQFSH--------------------HNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGML 113 (268)
T ss_pred HHHHHHHhcCCC--------------------CCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHH
Confidence 345444433321 22333332 355689999999999987643222234444444444
Q ss_pred HHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 275 ~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
.++. +..+|..|++|+|+||.||+++ .++.++|+|||++..+..
T Consensus 114 ~~l~~al~~lH~~~i~H~dlkp~Nili~--~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 114 RGIAAGMKYLSDMNYVHRDLAARNILVN--SNLECKVSDFGLSRVLED 159 (268)
T ss_pred HHHHHHHHHHHHCCeeccccchhhEEEc--CCCcEEECCCccceeccc
Confidence 4433 6788999999999999999998 458899999999887643
No 156
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.35 E-value=1.4e-11 Score=124.08 Aligned_cols=146 Identities=12% Similarity=0.134 Sum_probs=95.2
Q ss_pred cccc-cceeeeeEEEEecCCCEEEEEeeC-CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 124 TPLA-TASIAQVHRATLVDGRQVVVKVQH-QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 124 ~pi~-sgs~gqV~~a~l~~g~~VAVKv~~-p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
..+| .|+.|.||+... +|..+|||..+ +++-..+..+- +.......-.+.+|
T Consensus 37 ~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~-------------------------~~~~~~~~~r~~rE 90 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDR-------------------------YLFTGLERTRAFAE 90 (239)
T ss_pred ceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhc-------------------------ccccchhhhHHHHH
Confidence 4677 899999999987 58899999764 44322211110 00000112235667
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-----cC---CCeeEeeecCC-ccCCChhhHHHcCCCHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SS---ETVLILEFMDG-IRLNDCESLEAFGVNKQKVVE 272 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-----~~---~~vLvmE~i~G-~~L~~~~~~~~~~~~~~~~~~ 272 (666)
.+.+.++.+ .++.+|+++. .. ..+||||+++| .+|.++. ....++. ....
T Consensus 91 ~~ll~~L~~------------------~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l--~~~~l~~-~~~~ 149 (239)
T PRK01723 91 FRLLAQLYE------------------AGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALL--QEAPLSE-EQWQ 149 (239)
T ss_pred HHHHHHHHh------------------CCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHH--hcCCCCH-HHHH
Confidence 888888865 2456676653 11 23599999998 5666552 2222333 2333
Q ss_pred HHHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 273 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 273 ~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.+++ .+..+|..|++|+|+||+|||++. ++++.|||||.+..-.
T Consensus 150 ~i~~-~l~~lH~~GI~HrDlkp~NILv~~--~~~v~LIDfg~~~~~~ 193 (239)
T PRK01723 150 AIGQ-LIARFHDAGVYHADLNAHNILLDP--DGKFWLIDFDRGELRT 193 (239)
T ss_pred HHHH-HHHHHHHCCCCCCCCCchhEEEcC--CCCEEEEECCCcccCC
Confidence 3333 488999999999999999999984 5789999999988765
No 157
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.35 E-value=3.3e-11 Score=112.34 Aligned_cols=138 Identities=21% Similarity=0.272 Sum_probs=96.1
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
.+++.|.-+.++.+... |.++++|..-|..-..-..|.++ .+| .-++||+
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~kl----------------------------rr~-Rt~~Ear 51 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKL----------------------------RRE-RTRREAR 51 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHH----------------------------HHH-HHHHHHH
Confidence 46788999999999764 66799997654322211222221 000 1457999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHHHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 281 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l~~ 281 (666)
.+.+++. .++++|.+|. .....|||||++|..|.+... .. ...+...+-.. ..-
T Consensus 52 il~~a~~------------------~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~--~~---~~~~~r~vG~~-vg~ 107 (204)
T COG3642 52 ILAKARE------------------AGVPVPIVYDVDPDNGLIVMEYIEGELLKDALE--EA---RPDLLREVGRL-VGK 107 (204)
T ss_pred HHHHHHH------------------cCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHH--hc---chHHHHHHHHH-HHH
Confidence 9998876 2689999997 456689999999998886632 22 12333333332 456
Q ss_pred hhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 282 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 282 i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+|..|++|+||-+.||++. ++++.+||||+...-
T Consensus 108 lH~~givHGDLTtsNiIl~---~~~i~~IDfGLg~~s 141 (204)
T COG3642 108 LHKAGIVHGDLTTSNIILS---GGRIYFIDFGLGEFS 141 (204)
T ss_pred HHhcCeecCCCccceEEEe---CCcEEEEECCccccc
Confidence 7999999999999999997 356999999998743
No 158
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.34 E-value=3.5e-12 Score=130.47 Aligned_cols=137 Identities=17% Similarity=0.176 Sum_probs=93.6
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||.|++|.||+|+..++..||||+.++.... +-+|.+|.+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~--------------------------------------~~~~~~E~~ 53 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--------------------------------------PEAFLQEAQ 53 (262)
T ss_pred eecCCCCCCcEEEEEecCCceEEEEecccCccC--------------------------------------HHHHHHHHH
Confidence 469999999999999876678999987642110 001445666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---ecCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---QSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~~- 278 (666)
.+.++.+ + .+.+++ .....++||||++|++|.+...... ...+...+...+.+++
T Consensus 54 ~l~~l~~------------------~--~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~ 113 (262)
T cd05071 54 VMKKLRH------------------E--KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 113 (262)
T ss_pred HHHhCCC------------------C--CcceEEEEECCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHH
Confidence 5555432 1 122222 2455689999999999877643211 1234444444444433
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|+||+||+++ .++.++|+|||.+..++.
T Consensus 114 aL~~lH~~~i~H~dl~p~Nill~--~~~~~~L~dfg~~~~~~~ 154 (262)
T cd05071 114 GMAYVERMNYVHRDLRAANILVG--ENLVCKVADFGLARLIED 154 (262)
T ss_pred HHHHHHHCCccccccCcccEEEc--CCCcEEeccCCceeeccc
Confidence 6778999999999999999998 458899999999987653
No 159
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.34 E-value=1.9e-12 Score=132.87 Aligned_cols=139 Identities=17% Similarity=0.215 Sum_probs=90.8
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+-||.|.+|.||.++++ ++...|+||........ . +++.+ ...|.
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~---r----kKl~R---------------------------a~tE~ 128 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS---R----KKLKR---------------------------AQTER 128 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh---h----hHHHH---------------------------HHHHH
Confidence 57999999999999987 45889999974321111 0 00000 11133
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--cCC--CeeEeeecCCccCCChhhHHHc-CCCHH--HHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSE--TVLILEFMDGIRLNDCESLEAF-GVNKQ--KVVEEIT 275 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~~~--~vLvmE~i~G~~L~~~~~~~~~-~~~~~--~~~~~l~ 275 (666)
..+..+ .+..+|.+|. .++ .+||||||+|+.|..+.+-+.. .+... ++-..-+
T Consensus 129 eIL~~l--------------------DHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEv 188 (459)
T KOG0610|consen 129 EILSLL--------------------DHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEV 188 (459)
T ss_pred HHHHhc--------------------CCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHH
Confidence 333332 2466888885 333 4799999999999876432211 11111 1111112
Q ss_pred HHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 276 RAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 276 ~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
-+.++++|--|||.||+||+||||.+ +|.|.|.||-++...
T Consensus 189 l~ALEYLHmlGivYRDLKPENILvre--dGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 189 LLALEYLHMLGIVYRDLKPENILVRE--DGHIMLSDFDLSLRC 229 (459)
T ss_pred HHHHHHHHhhceeeccCCcceeEEec--CCcEEeeeccccccC
Confidence 23488899999999999999999994 599999999998765
No 160
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.34 E-value=2.6e-12 Score=128.14 Aligned_cols=137 Identities=16% Similarity=0.267 Sum_probs=103.6
Q ss_pred cccccceeeeeEEEEe-cCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l-~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||.||||..+.|+. -++++||||.-.-.. +.+. ++.|.
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-------------------------~APQ--------------LrdEY 74 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-------------------------EAPQ--------------LRDEY 74 (449)
T ss_pred cccccCcceeeecccccccCceEEEEeccccC-------------------------Ccch--------------HHHHH
Confidence 5799999999999984 489999999642111 1111 22233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---cC-CCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SS-ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---~~-~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.-+.+.. ...||.+|. |+ .++||||.+ |.+|.|+-.+....++.+.++....+++
T Consensus 75 r~YKlL~g-------------------~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi 134 (449)
T KOG1165|consen 75 RTYKLLGG-------------------TEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMI 134 (449)
T ss_pred HHHHHHcC-------------------CCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHH
Confidence 33233221 356899986 44 368999988 9999999888888889999888888877
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCC---CCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDP---PHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~---~~~i~liDFG~~~~l~ 319 (666)
++.+|++.+|-||+||.|+||.+.+ ...|.+|||||++.+-
T Consensus 135 ~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr 180 (449)
T KOG1165|consen 135 TRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR 180 (449)
T ss_pred HHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence 8889999999999999999998532 1347899999999863
No 161
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.34 E-value=3.2e-12 Score=147.86 Aligned_cols=139 Identities=17% Similarity=0.242 Sum_probs=91.7
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||.|++|.||+|+.. +|+.||||+.+..-.. +- .... .+..|.
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~----~~------------------------~~~~------~~~~E~ 55 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI----NK------------------------NMVH------QVQAER 55 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc----CH------------------------HHHH------HHHHHH
Confidence 57999999999999976 7999999997642100 00 0000 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+..+++ ..|+.++. ....+|||||++|.+|.++.... ..++...+...+.+++
T Consensus 56 ~~l~~l~h--------------------p~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil 114 (669)
T cd05610 56 DALALSKS--------------------PFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVA 114 (669)
T ss_pred HHHHhcCC--------------------CCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHH
Confidence 33333322 12223322 45578999999999998764321 2234444444344433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+||||.|||++ .++.++|+|||+++...
T Consensus 115 ~aL~yLH~~gIiHrDLKP~NILl~--~~g~vkL~DFGls~~~~ 155 (669)
T cd05610 115 LALDYLHRHGIIHRDLKPDNMLIS--NEGHIKLTDFGLSKVTL 155 (669)
T ss_pred HHHHHHHhCCEEeCCccHHHEEEc--CCCCEEEEeCCCCcccc
Confidence 7889999999999999999998 45899999999998654
No 162
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.34 E-value=4.2e-12 Score=135.48 Aligned_cols=38 Identities=21% Similarity=0.295 Sum_probs=34.2
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|+||.||+++ .++.++|+|||++..+
T Consensus 192 l~~lH~~~i~H~dikp~Nil~~--~~~~~kl~dfg~~~~~ 229 (343)
T cd05103 192 MEFLASRKCIHRDLAARNILLS--ENNVVKICDFGLARDI 229 (343)
T ss_pred HHHHHhCCeecCCCccCeEEEc--CCCcEEEEeccccccc
Confidence 6788999999999999999998 4589999999998765
No 163
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.33 E-value=2.5e-12 Score=133.28 Aligned_cols=141 Identities=20% Similarity=0.198 Sum_probs=90.9
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.+ +|+.||||+.+....... ... .+.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~-----------------------------~~~------~~~~E~ 51 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEE-----------------------------VKE------TTLREL 51 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEeccccccc-----------------------------chh------hHHHHH
Confidence 56899999999999986 689999998764311000 000 022233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
..+.++.+ ++ +.+...+. ....++||||++|..+..+.. ...+++...+...+.+++
T Consensus 52 ~~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~ 112 (287)
T cd07848 52 KMLRTLKQ------------------ENIVELKEAFRRRGKLYLVFEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKA 112 (287)
T ss_pred HHHHhCCC------------------ccccchhhhEecCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHH
Confidence 33333322 11 11111122 345689999999976654321 123455555555555544
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|+||+||+++ .++.++|+|||++..+..
T Consensus 113 L~~lH~~~i~H~dlkp~Nill~--~~~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 113 IHWCHKNDIVHRDIKPENLLIS--HNDVLKLCDFGFARNLSE 152 (287)
T ss_pred HHHHHHCCeecCCCCHHHEEEc--CCCcEEEeeccCcccccc
Confidence 7788999999999999999998 458999999999987643
No 164
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.33 E-value=7.9e-13 Score=136.56 Aligned_cols=152 Identities=16% Similarity=0.218 Sum_probs=101.3
Q ss_pred ChhccccccCccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHh
Q 005995 113 SMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (666)
Q Consensus 113 ~~~~~f~~~~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (666)
++...|...+ -||.||||.||+|... +++.||+||..-+..+..-.|+
T Consensus 10 ~~~~~~~~~~--~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIedi----------------------------- 58 (467)
T KOG0201|consen 10 DPELLYTKLE--LIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDI----------------------------- 58 (467)
T ss_pred Ccccccccch--hccccccceeeeeeeccccceEEEEEechhhcchhhHHH-----------------------------
Confidence 4566777774 5999999999999964 7899999997643222111111
Q ss_pred chhhhcHHHHHH--HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCC-CHH
Q 005995 192 APKELDFNSEAE--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGV-NKQ 268 (666)
Q Consensus 192 ~~~Eld~~~Ea~--n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~-~~~ 268 (666)
.+|+.+..+.+ |+.+.... .+..+..+++|||+.|+++.+..+ ..++ +..
T Consensus 59 -qqei~~Ls~~~~~~it~yygs------------------------yl~g~~LwiiMey~~gGsv~~lL~--~~~~~~E~ 111 (467)
T KOG0201|consen 59 -QQEISVLSQCDSPNITEYYGS------------------------YLKGTKLWIIMEYCGGGSVLDLLK--SGNILDEF 111 (467)
T ss_pred -HHHHHHHHhcCcchHHhhhhh------------------------eeecccHHHHHHHhcCcchhhhhc--cCCCCccc
Confidence 12222222221 22221111 112566789999999999998744 3333 444
Q ss_pred HHHHHHHHH--HHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHH
Q 005995 269 KVVEEITRA--YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (666)
Q Consensus 269 ~~~~~l~~~--~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~ 324 (666)
.++..+.+. .+..+|.++.+|+|+|+.||++.. +|.++|.|||.++.++.....
T Consensus 112 ~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~--~g~vkl~DfgVa~ql~~~~~r 167 (467)
T KOG0201|consen 112 EIAVILREVLKGLDYLHSEKKIHRDIKAANILLSE--SGDVKLADFGVAGQLTNTVKR 167 (467)
T ss_pred eeeeehHHHHHHhhhhhhcceecccccccceeEec--cCcEEEEecceeeeeechhhc
Confidence 444444443 378899999999999999999995 489999999999998765544
No 165
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.33 E-value=4.5e-12 Score=129.24 Aligned_cols=137 Identities=17% Similarity=0.177 Sum_probs=94.9
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||+|++|.||+|...+++.||||+.+++.... -++.+|..
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~--------------------------------------~~~~~e~~ 53 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSP--------------------------------------EAFLQEAQ 53 (261)
T ss_pred eeeccCcceEEEEEEEcCCceEEEEEecCCccCH--------------------------------------HHHHHHHH
Confidence 5799999999999998888899999876532110 01334544
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~~ 278 (666)
.+.++.+ ..+++++. ....+++|||++|.+|.+...... ..++...+...+.++.
T Consensus 54 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~ 113 (261)
T cd05034 54 IMKKLRH--------------------DKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIA 113 (261)
T ss_pred HHhhCCC--------------------CCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHH
Confidence 4444322 23444443 356789999999999877643211 1234444444443332
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|+||.||+++ +++.++|+|||.+..+..
T Consensus 114 ~al~~lh~~~i~h~di~p~nili~--~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 114 EGMAYLESRNYIHRDLAARNILVG--ENLVCKIADFGLARLIED 155 (261)
T ss_pred HHHHHHHhCCcccCCcchheEEEc--CCCCEEECccccceeccc
Confidence 6788999999999999999998 458999999999887754
No 166
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.33 E-value=6.7e-12 Score=130.52 Aligned_cols=143 Identities=16% Similarity=0.173 Sum_probs=96.3
Q ss_pred hccccccCccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhch
Q 005995 115 GGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 193 (666)
Q Consensus 115 ~~~f~~~~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~ 193 (666)
.+.|.-. +.||.|++|.||+|+.. +|+.|++|+.........
T Consensus 11 ~~~y~i~--~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~----------------------------------- 53 (292)
T cd06644 11 NEVWEII--GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL----------------------------------- 53 (292)
T ss_pred chhhhhh--heecCCCCeEEEEEEECCCCceEEEEEeccCCHHHH-----------------------------------
Confidence 3444433 34999999999999975 689999998765422111
Q ss_pred hhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHH
Q 005995 194 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQK 269 (666)
Q Consensus 194 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ 269 (666)
-++.+|...+..+.+ ..+++++. .+..++||||++|.++..........++...
T Consensus 54 --~~~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~ 111 (292)
T cd06644 54 --EDYMVEIEILATCNH--------------------PYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ 111 (292)
T ss_pred --HHHHHHHHHHHhCCC--------------------CcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHH
Confidence 013345555444332 12333332 5667999999999988665322233455555
Q ss_pred HHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 270 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 270 ~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+...+.++. +..+|..|++|+|+||.||+++ .+++++|+|||++...
T Consensus 112 ~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~--~~~~~kl~dfg~~~~~ 160 (292)
T cd06644 112 IQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT--LDGDIKLADFGVSAKN 160 (292)
T ss_pred HHHHHHHHHHHHHHHhcCCeeecCCCcceEEEc--CCCCEEEccCccceec
Confidence 555444443 6788999999999999999998 4589999999987654
No 167
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.33 E-value=6.7e-12 Score=129.80 Aligned_cols=137 Identities=16% Similarity=0.130 Sum_probs=94.6
Q ss_pred cccccceeeeeEEEEe-----cCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l-----~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
+.||.|++|+||.++. .+|+.||||+.+....... +-.+
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~ 53 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQN------------------------------------TSGW 53 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHH------------------------------------HHHH
Confidence 4699999999988653 3688999998765422110 0113
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee------cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHH
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~ 272 (666)
.+|.+.+.++.+ + .+++++. ....+++|||++|.+|.+.. ....++...+..
T Consensus 54 ~~E~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~--~~~~l~~~~~~~ 111 (283)
T cd05080 54 KKEINILKTLYH------------------E--NIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL--PKHKLNLAQLLL 111 (283)
T ss_pred HHHHHHHHhCCC------------------C--CEeeEEEEEecCCCceEEEEecCCCCCCHHHHH--HHcCCCHHHHHH
Confidence 445555554432 2 2333332 12357999999999998764 344566666665
Q ss_pred HHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 273 ~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
.+.+++ +..+|..|++|+|+||.||+++ .++.++|+|||++..+..
T Consensus 112 i~~~l~~~l~~lH~~~i~H~dlkp~Nili~--~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 112 FAQQICEGMAYLHSQHYIHRDLAARNVLLD--NDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred HHHHHHHHHHHHHHCCeeccccChheEEEc--CCCcEEEeecccccccCC
Confidence 555544 7888999999999999999998 458899999999887653
No 168
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.33 E-value=5.5e-12 Score=128.68 Aligned_cols=138 Identities=20% Similarity=0.231 Sum_probs=95.4
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||+|++|.||+|..++|+.||||..+.+.... -++.+|..
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~--------------------------------------~~~~~E~~ 53 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSP--------------------------------------EAFLAEAN 53 (260)
T ss_pred eeeccCccceEEeeecCCCceEEEEEecCCCCcH--------------------------------------HHHHHHHH
Confidence 4699999999999998899999999876432110 12344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeeecCCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHHHHHHH--H
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--A 279 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~l~~~~--l 279 (666)
.+.++.+ ++ +.+...+.....+++|||++|++|.+..... ....+...+...+.+++ +
T Consensus 54 ~l~~l~h------------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al 115 (260)
T cd05067 54 LMKQLQH------------------PRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGM 115 (260)
T ss_pred HHHhcCC------------------cCeeeEEEEEccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence 5544432 11 2222222245679999999999988764321 12344444444444444 7
Q ss_pred HHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 280 ~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
..+|..|++|+|+||.||+++ .++.+.|+|||++..+.
T Consensus 116 ~~LH~~~i~H~dl~p~ni~i~--~~~~~~l~dfg~~~~~~ 153 (260)
T cd05067 116 AFIERKNYIHRDLRAANILVS--ETLCCKIADFGLARLIE 153 (260)
T ss_pred HHHhcCCeecccccHHhEEEc--CCCCEEEccCcceeecC
Confidence 888999999999999999998 45889999999998765
No 169
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.33 E-value=5.1e-12 Score=128.24 Aligned_cols=140 Identities=19% Similarity=0.223 Sum_probs=96.4
Q ss_pred cccccceeeeeEEEEecC-----CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 124 TPLATASIAQVHRATLVD-----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~-----g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
+.||.|++|+||+|+..+ +..||+|+.++...... .-++
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~ 48 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQ------------------------------------IEEF 48 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHH------------------------------------HHHH
Confidence 579999999999999753 48899999876532210 0113
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcC-CCHHHHHHH
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEE 273 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~~~~~ 273 (666)
..|.+.+..+.+ ..+++++. .+..+++|||++|.+|.+........ .+...+...
T Consensus 49 ~~e~~~l~~l~~--------------------~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ 108 (258)
T smart00219 49 LREARIMRKLDH--------------------PNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSF 108 (258)
T ss_pred HHHHHHHHhcCC--------------------CchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHH
Confidence 334444444321 12333332 45678999999999998775432222 565555555
Q ss_pred HHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 274 l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+.+++ +..+|..|++|+|++|+||+++ +++.++|+|||++......
T Consensus 109 ~~ql~~~l~~lh~~~~~h~dl~~~nil~~--~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 109 ALQIARGMEYLESKNFIHRDLAARNCLVG--ENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred HHHHHHHHHHHhcCCeeecccccceEEEc--cCCeEEEcccCCceecccc
Confidence 55443 7788999999999999999998 4578999999999876543
No 170
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.33 E-value=4.1e-12 Score=132.35 Aligned_cols=138 Identities=20% Similarity=0.224 Sum_probs=92.3
Q ss_pred cccccceeeeeEEEEecC-------------C--CEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHH
Q 005995 124 TPLATASIAQVHRATLVD-------------G--RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEW 188 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~-------------g--~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 188 (666)
+.||+|++|.||+|+..+ | ..||||+.+++.......
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~---------------------------- 62 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARN---------------------------- 62 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHH----------------------------
Confidence 469999999999997642 2 248999988764321111
Q ss_pred HHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHc-
Q 005995 189 CKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF- 263 (666)
Q Consensus 189 ~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~- 263 (666)
+|.+|.+.+.++++ ..+++++. ....++||||++|.+|.++......
T Consensus 63 --------~~~~ei~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~ 114 (295)
T cd05097 63 --------DFLKEIKIMSRLKN--------------------PNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIE 114 (295)
T ss_pred --------HHHHHHHHHHhCCC--------------------CCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhcccc
Confidence 14456565555433 22333332 4567899999999999876432110
Q ss_pred ----------CCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 264 ----------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 264 ----------~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
..+...+...+.++. +..+|..|++|+|+||+||+++ .++.++|+|||++..+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~--~~~~~kl~dfg~~~~~~ 180 (295)
T cd05097 115 STFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVG--NHYTIKIADFGMSRNLY 180 (295)
T ss_pred ccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEc--CCCcEEecccccccccc
Confidence 123333344444433 6788999999999999999998 45789999999987653
No 171
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.33 E-value=7.7e-12 Score=134.29 Aligned_cols=136 Identities=18% Similarity=0.244 Sum_probs=86.9
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+.......... ...+.+|.
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------------~~~~~~E~ 71 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH-----------------------------------AKRAYREL 71 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCceeEEEEecccccchhH-----------------------------------HHHHHHHH
Confidence 57999999999999865 7999999987533211000 00122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-------cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l 274 (666)
..+..+.+ ++ +.+..++. ....++||||++|.... . + ...++...+...+
T Consensus 72 ~~l~~l~h------------------~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~-~--~-~~~~~~~~~~~~~ 129 (359)
T cd07876 72 VLLKCVNH------------------KNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQ-V--I-HMELDHERMSYLL 129 (359)
T ss_pred HHHHhCCC------------------CCEeeeeeeeccCCCccccceeEEEEeCCCcCHHH-H--H-hccCCHHHHHHHH
Confidence 44433322 11 12222221 12358999999874322 1 1 2234555555444
Q ss_pred HHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 275 ~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
.++. +..+|..|++|+|+||+||+++ .++.++|+|||+++..
T Consensus 130 ~qi~~~L~~LH~~~ivHrDlkp~NIl~~--~~~~~kl~Dfg~a~~~ 173 (359)
T cd07876 130 YQMLCGIKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTA 173 (359)
T ss_pred HHHHHHHHHHHhCCcccCCCCHHHEEEC--CCCCEEEecCCCcccc
Confidence 4444 7889999999999999999998 4689999999998654
No 172
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.33 E-value=7.9e-12 Score=133.94 Aligned_cols=73 Identities=21% Similarity=0.420 Sum_probs=53.3
Q ss_pred CCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 241 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
..++||||++|. +.+. + ...++...+...+.+++ +..+|..|++|+|+||+||+++ .++.++|+|||+++..
T Consensus 96 ~~~lv~e~~~~~-l~~~--~-~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~--~~~~~kl~Dfg~~~~~ 169 (355)
T cd07874 96 DVYLVMELMDAN-LCQV--I-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTA 169 (355)
T ss_pred eeEEEhhhhccc-HHHH--H-hhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEC--CCCCEEEeeCcccccC
Confidence 358999999874 3222 1 22345555444444443 7889999999999999999998 4589999999999765
Q ss_pred C
Q 005995 319 S 319 (666)
Q Consensus 319 ~ 319 (666)
.
T Consensus 170 ~ 170 (355)
T cd07874 170 G 170 (355)
T ss_pred C
Confidence 4
No 173
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.33 E-value=7.1e-12 Score=127.86 Aligned_cols=137 Identities=19% Similarity=0.206 Sum_probs=94.2
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||+|++|.||+|...+++.||+|...++-... -.+.+|..
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~--------------------------------------~~~~~e~~ 53 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV--------------------------------------QAFLEEAN 53 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCCchhH--------------------------------------HHHHHHHH
Confidence 5699999999999998888999999876532100 01334555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~~ 278 (666)
.+.++.+ + .+.+++. ....+++|||++|++|.+...... ...+...+...+.++.
T Consensus 54 ~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~ 113 (261)
T cd05072 54 LMKTLQH------------------D--KLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA 113 (261)
T ss_pred HHHhCCC------------------C--CeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 5544432 2 2233332 455689999999999887643221 2234444444444433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|++|.||+++ +++.++|.|||.+..+..
T Consensus 114 ~~l~~LH~~~i~H~dl~p~nili~--~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 114 EGMAYIERKNYIHRDLRAANVLVS--ESLMCKIADFGLARVIED 155 (261)
T ss_pred HHHHHHHHCCeeccccchhhEEec--CCCcEEECCCccceecCC
Confidence 6788999999999999999998 458899999999987653
No 174
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.33 E-value=6.4e-12 Score=128.98 Aligned_cols=136 Identities=15% Similarity=0.137 Sum_probs=89.3
Q ss_pred ccccceeeeeEEEEec---CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 125 PLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~---~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
.||+|++|.||+|... ++..||+|..+...... .+.++.+|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~------------------------------------~~~~~~~E 45 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQ------------------------------------EQMKFLEE 45 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChH------------------------------------HHHHHHHH
Confidence 5899999999999864 34679999765432110 11235556
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHc----CCCHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF----GVNKQKVVEE 273 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~----~~~~~~~~~~ 273 (666)
...+.++++ ..|++++. ....++||||++|++|.++...... ..+...+...
T Consensus 46 ~~~l~~l~h--------------------~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~ 105 (269)
T cd05087 46 AQPYRSLQH--------------------SNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRM 105 (269)
T ss_pred HHHHHhCCC--------------------CCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHH
Confidence 655555432 22333332 3556899999999999876432111 1222222222
Q ss_pred HHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 274 l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+.++. +..+|..|++|+|+||.||+++. ++.++|+|||++...
T Consensus 106 ~~qi~~al~~lH~~~i~H~dlkp~nil~~~--~~~~kL~dfg~~~~~ 150 (269)
T cd05087 106 ACEIALGLLHLHKNNFIHSDLALRNCLLTA--DLTVKIGDYGLSHNK 150 (269)
T ss_pred HHHHHHHHHHHHHCCEeccccCcceEEEcC--CCcEEECCccccccc
Confidence 23322 67889999999999999999984 588999999998654
No 175
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.32 E-value=5.7e-12 Score=129.03 Aligned_cols=136 Identities=15% Similarity=0.137 Sum_probs=92.7
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+.+....... ..+.+|+
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~-------------------------------------~~~~~e~ 57 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDF-------------------------------------SLIQQEI 57 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCccchH-------------------------------------HHHHHHH
Confidence 57999999999999964 789999999864322110 0123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++.+ + .++.++. ....++||||++|.+|.+... .....+...+.....++.
T Consensus 58 ~~l~~~~h------------------~--~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~ 116 (267)
T cd06646 58 FMVKECKH------------------C--NIVAYFGSYLSREKLWICMEYCGGGSLQDIYH-VTGPLSELQIAYVCRETL 116 (267)
T ss_pred HHHHhcCC------------------C--CeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 44444322 1 2233332 345689999999999987643 122344444444444433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|++|+||+++ .++.++|+|||++..+.
T Consensus 117 ~~l~~lH~~~i~H~dl~p~nill~--~~~~~~l~dfg~~~~~~ 157 (267)
T cd06646 117 QGLAYLHSKGKMHRDIKGANILLT--DNGDVKLADFGVAAKIT 157 (267)
T ss_pred HHHHHHHHCCccccCCCHHHEEEC--CCCCEEECcCccceeec
Confidence 6788999999999999999998 45889999999998764
No 176
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.32 E-value=7e-12 Score=126.38 Aligned_cols=139 Identities=19% Similarity=0.242 Sum_probs=98.9
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
++||+|++|+||+|... +|+.|++|+.++...... -++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-------------------------------------~~~~~e~ 48 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKK-------------------------------------EKIINEI 48 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchhHH-------------------------------------HHHHHHH
Confidence 57999999999999976 789999999876543110 0123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++.+ ..++.++. ....+++|||++|.+|.++.......++...+...+.+++
T Consensus 49 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~ 108 (253)
T cd05122 49 QILKKCKH--------------------PNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELL 108 (253)
T ss_pred HHHHhCCC--------------------CCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHH
Confidence 44433321 22333332 4567899999999999877433223456666665555554
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+..+|..|++|+|++|+||+++ +++.++|+|||.+......
T Consensus 109 ~~l~~lh~~~i~h~dl~p~ni~i~--~~~~~~l~d~~~~~~~~~~ 151 (253)
T cd05122 109 KGLEYLHSNGIIHRDIKAANILLT--SDGEVKLIDFGLSAQLSDT 151 (253)
T ss_pred HHHHHhhcCCEecCCCCHHHEEEc--cCCeEEEeecccccccccc
Confidence 7889999999999999999998 4589999999999887654
No 177
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.32 E-value=6.4e-12 Score=140.45 Aligned_cols=76 Identities=17% Similarity=0.215 Sum_probs=57.7
Q ss_pred CeeEeeecCCccCCChhhHHH---cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 242 TVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 242 ~vLvmE~i~G~~L~~~~~~~~---~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
.++||||++|++|.+...... ..++...+...+.+++ +..+|..|++|+|+||.|||++ .++.++|+|||+++
T Consensus 114 i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~--~~~~vkL~DFGls~ 191 (496)
T PTZ00283 114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC--SNGLVKLGDFGFSK 191 (496)
T ss_pred EEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe--CCCCEEEEecccCe
Confidence 369999999999987643211 1244445555555544 7889999999999999999998 45899999999987
Q ss_pred ccC
Q 005995 317 KLS 319 (666)
Q Consensus 317 ~l~ 319 (666)
.+.
T Consensus 192 ~~~ 194 (496)
T PTZ00283 192 MYA 194 (496)
T ss_pred ecc
Confidence 654
No 178
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.32 E-value=3.3e-12 Score=138.75 Aligned_cols=138 Identities=15% Similarity=0.173 Sum_probs=91.9
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
.-+|.||||.|+.|.++ +++..|||+++.+.--+ ..|++. ...|.
T Consensus 374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~-~d~Ve~---------------------------------~~~Ek 419 (694)
T KOG0694|consen 374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ-RDEVES---------------------------------LMCEK 419 (694)
T ss_pred EEeccCcCceEEEEEEcCCCcEEEEEEeeccceec-cccHHH---------------------------------HHHHH
Confidence 57999999999999987 78899999998753200 011110 12233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHH--HHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQ--KVVEEITR 276 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~--~~~~~l~~ 276 (666)
+.++...+ +..+-..+. .+..+.||||+.|+++..+... ..++.. ++...-+-
T Consensus 420 rI~~la~~-------------------HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~--~~F~e~rarfyaAev~ 478 (694)
T KOG0694|consen 420 RIFELANR-------------------HPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHT--DVFSEPRARFYAAEVV 478 (694)
T ss_pred HHHHHhcc-------------------CCeEeecccccccCCeEEEEEEecCCCcEEEEEec--ccccHHHHHHHHHHHH
Confidence 33322211 122333443 3445799999999986655322 233433 33333334
Q ss_pred HHHHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 277 AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 277 ~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
..+..+|++||++||+|-.|||+| .+|.++|+||||+++-
T Consensus 479 l~L~fLH~~~IIYRDlKLdNiLLD--~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 479 LGLQFLHENGIIYRDLKLDNLLLD--TEGHVKIADFGLCKEG 518 (694)
T ss_pred HHHHHHHhcCceeeecchhheEEc--ccCcEEeccccccccc
Confidence 458899999999999999999999 5699999999999974
No 179
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.32 E-value=5.4e-12 Score=130.57 Aligned_cols=140 Identities=19% Similarity=0.254 Sum_probs=99.5
Q ss_pred cccccceeeeeEEEEe-cCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l-~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+-||.|.-|+||+|+. +.++.||||+..-+ + ...|+. .+++|.
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inLE--k-c~~~ld---------------------------------~l~kE~ 75 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIINLE--K-CNNDLD---------------------------------ALRKEV 75 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEeehh--h-hhhhHH---------------------------------HHHHHH
Confidence 3589998899999995 47899999976321 1 111111 134466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCccee-eeeee-ecCCCeeEeeecCCccCCChhhH-HHcCCCHHHHHHHHHHHH-
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVL-IPEVI-QSSETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~-vP~~~-~~~~~vLvmE~i~G~~L~~~~~~-~~~~~~~~~~~~~l~~~~- 278 (666)
.++..+.| |++. .-..+ ..+..++||.|+.|+++.++... -..|++...++..+.+.+
T Consensus 76 ~~msl~~H------------------PNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~Lk 137 (516)
T KOG0582|consen 76 QTMSLIDH------------------PNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLK 137 (516)
T ss_pred HHhhhcCC------------------CCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHH
Confidence 66665543 2221 11111 15677999999999999887542 234677777777777665
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|.+|||+|+||||++ .+|.++|.|||....+-
T Consensus 138 aL~YLH~~G~IHRdvKAgnILi~--~dG~VkLadFgvsa~l~ 177 (516)
T KOG0582|consen 138 ALDYLHQNGHIHRDVKAGNILID--SDGTVKLADFGVSASLF 177 (516)
T ss_pred HHHHHHhcCceecccccccEEEc--CCCcEEEcCceeeeeec
Confidence 8899999999999999999999 56999999999877663
No 180
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.32 E-value=8.4e-12 Score=127.65 Aligned_cols=141 Identities=13% Similarity=0.178 Sum_probs=93.7
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||.|++|+||+|...+|+.||||+.+.........+ + ..-.+.+|+.
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~-------------------------~------~~~~~~~e~~ 54 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAE-------------------------K------EYEKLQEEVD 54 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHH-------------------------H------HHHHHHHHHH
Confidence 56999999999999988899999998764321110000 0 0011444555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
.+.++++ ..+++.+. ....+++|||++|++|.+.... ....+...+...+.++.
T Consensus 55 ~l~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~ 113 (265)
T cd06631 55 LLKSLKH--------------------VNIVQYLGTCLDDNTISIFMEFVPGGSISSILNR-FGPLPEPVFCKYTKQILD 113 (265)
T ss_pred HHHhcCC--------------------CCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 5555432 12333332 4456899999999999876431 12334444443333333
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|++|.||+++ +++.++|+|||++..+
T Consensus 114 ~l~~lH~~~i~H~dl~p~nil~~--~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 114 GVAYLHNNCVVHRDIKGNNVMLM--PNGIIKLIDFGCARRL 152 (265)
T ss_pred HHHHHHhCCcccCCcCHHhEEEC--CCCeEEeccchhhHhh
Confidence 6778999999999999999998 4589999999988765
No 181
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.32 E-value=3.7e-12 Score=133.10 Aligned_cols=136 Identities=16% Similarity=0.125 Sum_probs=89.7
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
..||.|++|.||+|+.+ +|+.||+|..+........ ..+.+|.
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~~E~ 55 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAP------------------------------------CTAIREV 55 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCch------------------------------------hHHHHHH
Confidence 57999999999999875 7899999987543211100 0122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++.+ ..|++++. ....++||||++| +|.+.........+...+...+.+++
T Consensus 56 ~~l~~l~h--------------------~nI~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~ 114 (301)
T cd07873 56 SLLKDLKH--------------------ANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLL 114 (301)
T ss_pred HHHHhcCC--------------------CCcceEEEEEecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 44444432 12333332 3456899999986 55443222222344555544444443
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|+||+||+++ .++.++|+|||++...
T Consensus 115 ~aL~~lH~~~i~H~dlkp~Nil~~--~~~~~kl~dfg~~~~~ 154 (301)
T cd07873 115 RGLNYCHRRKVLHRDLKPQNLLIN--ERGELKLADFGLARAK 154 (301)
T ss_pred HHHHHHHhCCeeCCCCCHHHEEEC--CCCcEEECcCcchhcc
Confidence 7788999999999999999998 4589999999998754
No 182
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.32 E-value=6.5e-12 Score=127.77 Aligned_cols=140 Identities=19% Similarity=0.183 Sum_probs=92.7
Q ss_pred ccccceeeeeEEEEecC--C--CEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHH
Q 005995 125 PLATASIAQVHRATLVD--G--RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~~--g--~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 200 (666)
.||+|++|.||+|...+ | ..||||+.+++...... -++.+
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~~ 45 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIM------------------------------------DDFLK 45 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHH------------------------------------HHHHH
Confidence 58999999999998753 3 36999988765432100 01334
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeeecCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHHH
Q 005995 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 278 (666)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~~ 278 (666)
|.+.+.++++ ++ +.+...+.....++||||++|++|.+...-.. ...+...+...+.++.
T Consensus 46 e~~~l~~l~h------------------~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~ 107 (257)
T cd05040 46 EAAIMHSLDH------------------ENLIRLYGVVLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIA 107 (257)
T ss_pred HHHHHhhcCC------------------CCccceeEEEcCCeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHH
Confidence 5555555432 11 11111221355689999999999987643221 2244454544444433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|+||+||+++. ++.++|+|||++..+..
T Consensus 108 ~~L~~lH~~~i~H~di~p~nil~~~--~~~~kl~dfg~~~~~~~ 149 (257)
T cd05040 108 NGMRYLESKRFIHRDLAARNILLAS--DDKVKIGDFGLMRALPQ 149 (257)
T ss_pred HHHHHHHhCCccccccCcccEEEec--CCEEEeccccccccccc
Confidence 67889999999999999999994 58999999999987643
No 183
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.32 E-value=7.7e-12 Score=129.37 Aligned_cols=138 Identities=12% Similarity=0.166 Sum_probs=92.0
Q ss_pred cccccceeeeeEEEEec-----CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 124 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-----~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
+.||+|++|+||+|+.. +++.|+||..+....... .-++
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~------------------------------------~~~~ 54 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQ------------------------------------WGEF 54 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHH------------------------------------HHHH
Confidence 56999999999999852 568899998764221110 0114
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH------------
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA------------ 262 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~------------ 262 (666)
.+|+..+.++++ ..+++++. ....++||||++|++|.++.....
T Consensus 55 ~~E~~~l~~l~h--------------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 114 (283)
T cd05090 55 QQEASLMAELHH--------------------PNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDED 114 (283)
T ss_pred HHHHHHHhhCCC--------------------CCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccc
Confidence 445555555432 22333332 355689999999998877643221
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 263 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 263 ----~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
..++...+...+.++. +..+|..|++|+|+||.|||++ .++.++|+|||+++.+.
T Consensus 115 ~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~--~~~~~kl~dfg~~~~~~ 175 (283)
T cd05090 115 GTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG--EQLHVKISDLGLSREIY 175 (283)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc--CCCcEEecccccccccc
Confidence 1123333444444433 7889999999999999999998 45789999999998763
No 184
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.32 E-value=7e-12 Score=130.07 Aligned_cols=143 Identities=15% Similarity=0.121 Sum_probs=92.5
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||.|++|+||+|... +|+.||||...+....... .+-.+..|.
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~----------------------------------~~~~~~~E~ 51 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK----------------------------------GESMALNEK 51 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchH----------------------------------HHHHHHHHH
Confidence 46999999999999975 7899999986543211000 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cCCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~l~~~~-- 278 (666)
..+.++.+. ..+.+...+. ....++||||++|++|.+..... ..+++...+...+.+++
T Consensus 52 ~il~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~ 114 (285)
T cd05630 52 QILEKVNSR-----------------FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCG 114 (285)
T ss_pred HHHHhCCCC-----------------CeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence 444443220 0111222222 34568999999999998764321 12345555554444443
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|+||.||+++ .++.++|+|||++...+
T Consensus 115 l~~lH~~~iiH~dikp~Nil~~--~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05630 115 LEDLHQERIVYRDLKPENILLD--DHGHIRISDLGLAVHVP 153 (285)
T ss_pred HHHHHhCCEEeCCCCHHHEEEC--CCCCEEEeeccceeecC
Confidence 6788999999999999999998 45889999999987654
No 185
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.32 E-value=6.3e-12 Score=128.87 Aligned_cols=141 Identities=18% Similarity=0.201 Sum_probs=93.5
Q ss_pred cccccceeeeeEEEEec-C---CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHH
Q 005995 124 TPLATASIAQVHRATLV-D---GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~---g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 199 (666)
+.||+|++|.||+|+.+ + +..||+|..+++...... -+|.
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~ 53 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQR------------------------------------RDFL 53 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHH------------------------------------HHHH
Confidence 57999999999999864 3 337999987654321110 0133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHH
Q 005995 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (666)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~ 277 (666)
+|...+.++.+ ++ +.+...+. ....++||||++|++|.++........+...+...+.++
T Consensus 54 ~e~~~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i 115 (267)
T cd05066 54 SEASIMGQFDH------------------PNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGI 115 (267)
T ss_pred HHHHHHHhCCC------------------CCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 45444444422 11 22222222 455689999999999987754322234555555444443
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
. +..+|..|++|+|+||.||+++ .++.++|+|||++..+..
T Consensus 116 ~~~l~~lH~~~i~h~dlkp~nili~--~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 116 ASGMKYLSDMGYVHRDLAARNILVN--SNLVCKVSDFGLSRVLED 158 (267)
T ss_pred HHHHHHHHHCCEeehhhchhcEEEC--CCCeEEeCCCCccccccc
Confidence 3 6788999999999999999998 458899999999887643
No 186
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.31 E-value=8.5e-12 Score=134.72 Aligned_cols=50 Identities=14% Similarity=0.232 Sum_probs=39.3
Q ss_pred HHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 268 ~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
..+...+.++. +..+|..|++|||+||.|||++ .++.++|+|||++..+.
T Consensus 212 ~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~--~~~~~kL~DfGla~~~~ 263 (374)
T cd05106 212 DDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT--DGRVAKICDFGLARDIM 263 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe--CCCeEEEeeceeeeecc
Confidence 33444444433 7788999999999999999998 45789999999987654
No 187
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.31 E-value=8.3e-12 Score=128.87 Aligned_cols=140 Identities=21% Similarity=0.206 Sum_probs=96.4
Q ss_pred cccccceeeeeEEEEec-CCC----EEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 124 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~----~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
+.||+|++|+||+|+.+ +|+ .||+|+........ ....+
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~------------------------------------~~~~~ 56 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPK------------------------------------ANKEI 56 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHH------------------------------------HHHHH
Confidence 57999999999999975 444 68999875443210 01114
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHH
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~ 277 (666)
.+|+..+.++.+ ++ +.+.....+...++||||++|++|.+........++...+...+.++
T Consensus 57 ~~e~~~l~~l~h------------------~~i~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi 118 (279)
T cd05057 57 LDEAYVMASVDH------------------PHVVRLLGICLSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQI 118 (279)
T ss_pred HHHHHHHHhCCC------------------CCcceEEEEEecCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHH
Confidence 456666655432 11 11222222567799999999999987644333345566666555554
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
. +..+|..|++|+|+||.||+++ .++.++|+|||++..+.
T Consensus 119 ~~~l~~LH~~~i~H~di~p~nil~~--~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 119 AKGMSYLEEKRLVHRDLAARNVLVK--TPQHVKITDFGLAKLLD 160 (279)
T ss_pred HHHHHHHHhCCEEecccCcceEEEc--CCCeEEECCCccccccc
Confidence 4 7889999999999999999998 45889999999998765
No 188
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.31 E-value=4.8e-12 Score=131.33 Aligned_cols=77 Identities=22% Similarity=0.307 Sum_probs=55.8
Q ss_pred CCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 240 SETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 240 ~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
+..++||||++| +|.+..... ..+++...+...+.++. +..+|..|++|+|+||.|||++ .++.++|+|||++.
T Consensus 82 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~--~~~~~kl~Dfg~~~ 158 (290)
T cd07862 82 TKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT--SSGQIKLADFGLAR 158 (290)
T ss_pred CcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEc--CCCCEEEccccceE
Confidence 345899999986 555443211 12345555555444444 7889999999999999999998 45899999999987
Q ss_pred ccC
Q 005995 317 KLS 319 (666)
Q Consensus 317 ~l~ 319 (666)
..+
T Consensus 159 ~~~ 161 (290)
T cd07862 159 IYS 161 (290)
T ss_pred ecc
Confidence 664
No 189
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.31 E-value=7.8e-12 Score=129.92 Aligned_cols=141 Identities=16% Similarity=0.159 Sum_probs=95.5
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|... +|+.||||+.++.-... .. ..-.+.+|+
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~----~~------------------------------~~~~~~~e~ 52 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVK----LK------------------------------QVEHVLNEK 52 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh----hh------------------------------HHHHHHHHH
Confidence 57999999999999975 78999999875421100 00 001134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++.+ ..+++++ . ....++||||++|.+|.+..... ..++...+...+.+++
T Consensus 53 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil 111 (290)
T cd05580 53 RILQSIRH--------------------PFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVV 111 (290)
T ss_pred HHHHhCCC--------------------CCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 55555432 1233333 2 45568999999999987764322 3345555544444433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+..+|..|++|+|+||.||+++ .++.++|+|||++..+...
T Consensus 112 ~~l~~lH~~~i~H~dl~p~nili~--~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 112 LALEYLHSLDIVYRDLKPENLLLD--SDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred HHHHHHHHCCEecCCCCHHHEEEC--CCCCEEEeeCCCccccCCC
Confidence 6788999999999999999998 4589999999998876543
No 190
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.31 E-value=8.1e-12 Score=135.61 Aligned_cols=128 Identities=16% Similarity=0.118 Sum_probs=86.6
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+.... .+.+|+
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~-------------------------------------------~~~~E~ 134 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQRG-------------------------------------------GTATEA 134 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechhhh-------------------------------------------hhHHHH
Confidence 46999999999999965 7899999953210 023455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++.| ..|.+++ . ....++|||++.| .|.+... ....++...+...+.+++
T Consensus 135 ~il~~l~H--------------------pnIv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~-~~~~l~~~~~~~i~~qi~ 192 (391)
T PHA03212 135 HILRAINH--------------------PSIIQLKGTFTYNKFTCLILPRYKT-DLYCYLA-AKRNIAICDILAIERSVL 192 (391)
T ss_pred HHHHhCCC--------------------CCCCCEeEEEEECCeeEEEEecCCC-CHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 55555433 1223333 2 4556899999965 4433321 223455555555444443
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|||+||+|||++ .++.++|+|||++...
T Consensus 193 ~aL~ylH~~~IvHrDiKP~NIll~--~~~~vkL~DFG~a~~~ 232 (391)
T PHA03212 193 RAIQYLHENRIIHRDIKAENIFIN--HPGDVCLGDFGAACFP 232 (391)
T ss_pred HHHHHHHhCCcccCCCChHhEEEc--CCCCEEEEeCCccccc
Confidence 7889999999999999999998 4588999999998653
No 191
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.31 E-value=5e-12 Score=140.26 Aligned_cols=152 Identities=14% Similarity=0.161 Sum_probs=106.8
Q ss_pred CChhccccccCccccccceeeeeEEEEe-cCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHH
Q 005995 112 ESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCK 190 (666)
Q Consensus 112 ~~~~~~f~~~~~~pi~sgs~gqV~~a~l-~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 190 (666)
.+..+.|+-++ -||.|.+|+||+++. ++|+-+||||+.|+....-+.++
T Consensus 15 pdp~d~~ei~e--vig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~---------------------------- 64 (953)
T KOG0587|consen 15 PDPADIFEIIE--VIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIEL---------------------------- 64 (953)
T ss_pred CCCCCccEEEE--EEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHH----------------------------
Confidence 34566665544 489999999999985 58999999999997654322211
Q ss_pred hchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---------cCCCeeEeeecCCccCCChhhHH
Q 005995 191 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLE 261 (666)
Q Consensus 191 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---------~~~~vLvmE~i~G~~L~~~~~~~ 261 (666)
| -|+-++.. +++ .++..|. ..+.+||||||.|++++|+..--
T Consensus 65 ----------e-ynil~~~~----------------~hp--nv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~ 115 (953)
T KOG0587|consen 65 ----------E-YNMLKKYS----------------HHP--NVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNT 115 (953)
T ss_pred ----------H-HHHHHhcc----------------CCC--CcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhh
Confidence 1 12222221 222 3333332 35679999999999999985422
Q ss_pred -HcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHH
Q 005995 262 -AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (666)
Q Consensus 262 -~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~ 324 (666)
...++...++.++..++ +.++|.+-++|||+|-.|||++. ++.++|+|||....++.....
T Consensus 116 ~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~--e~~VKLvDFGvSaQldsT~gr 179 (953)
T KOG0587|consen 116 KGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTE--NAEVKLVDFGVSAQLDSTVGR 179 (953)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEec--cCcEEEeeeeeeeeeeccccc
Confidence 22344556777777766 67788889999999999999994 589999999999999765443
No 192
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.31 E-value=9.4e-12 Score=128.45 Aligned_cols=137 Identities=18% Similarity=0.186 Sum_probs=95.6
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+.. +++.||+|+.+....... -++..|+
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-------------------------------------~~~~~e~ 53 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEEL-------------------------------------EDFMVEI 53 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHH-------------------------------------HHHHHHH
Confidence 35999999999999975 789999999865422111 0134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++.+ ..+++++. ....++||||++|.+|.++.......++...+...+.++.
T Consensus 54 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~ 113 (280)
T cd06611 54 DILSECKH--------------------PNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQML 113 (280)
T ss_pred HHHHhCCC--------------------CceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 55544432 22333332 4556899999999999876433233455555555554443
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|++|.||+++ .++.++|+|||.+....
T Consensus 114 ~~l~~lh~~~i~h~dl~p~nili~--~~~~~~l~d~g~~~~~~ 154 (280)
T cd06611 114 EALNFLHSHKVIHRDLKAGNILLT--LDGDVKLADFGVSAKNK 154 (280)
T ss_pred HHHHHHHHCCcccCCCChhhEEEC--CCCCEEEccCccchhhc
Confidence 6788999999999999999998 45899999999876653
No 193
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.31 E-value=1.1e-11 Score=126.54 Aligned_cols=142 Identities=15% Similarity=0.130 Sum_probs=93.0
Q ss_pred ccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
.+.||+|++|+||+|... +|++||||+.+......... . +-.++.+|
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~-------------------------~-------~~~~~~~e 54 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETK-------------------------K-------EVNALECE 54 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhH-------------------------H-------HHHHHHHH
Confidence 468999999999999865 78999999876432111000 0 00114455
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~ 277 (666)
.+.+.++.+ ++ +.+++. ....+++|||++|.+|.+.... ...++.......+.++
T Consensus 55 ~~~l~~l~~------------------~~--i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l 113 (263)
T cd06625 55 IQLLKNLQH------------------ER--IVQYYGCLRDDETLSIFMEYMPGGSVKDQLKA-YGALTETVTRKYTRQI 113 (263)
T ss_pred HHHHHhCCC------------------CC--eeeeEEEEccCCeEEEEEEECCCCcHHHHHHH-hCCCCHHHHHHHHHHH
Confidence 555554432 22 233332 3456899999999998776432 1223333333333332
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+ +..+|..|++|+|+||+||+++ .+++++|+|||++..+.
T Consensus 114 ~~~l~~lH~~~i~H~dl~p~nilv~--~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 114 LEGVEYLHSNMIVHRDIKGANILRD--SAGNVKLGDFGASKRLQ 155 (263)
T ss_pred HHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEeecccceecc
Confidence 2 6788999999999999999998 45899999999987654
No 194
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.30 E-value=7.9e-12 Score=127.12 Aligned_cols=81 Identities=17% Similarity=0.117 Sum_probs=60.0
Q ss_pred CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCC-----ceEEEec
Q 005995 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH-----RPILLDF 312 (666)
Q Consensus 240 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~-----~i~liDF 312 (666)
...++||||++|++|.+........++...+...+.++. +..+|..|++|+|+||+||+++.+.+. .++|+||
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCC
Confidence 567999999999999877543332455555554444443 678899999999999999999854211 6999999
Q ss_pred ccccccCH
Q 005995 313 GLTKKLSS 320 (666)
Q Consensus 313 G~~~~l~~ 320 (666)
|++..+..
T Consensus 153 g~a~~~~~ 160 (259)
T cd05037 153 GIPITVLS 160 (259)
T ss_pred Cccccccc
Confidence 99887543
No 195
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.30 E-value=1.3e-11 Score=126.99 Aligned_cols=142 Identities=17% Similarity=0.180 Sum_probs=95.2
Q ss_pred cccccceeeeeEEEEe-cCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l-~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+. .+|+.||||+.+......... ++.+|.
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~------------------------------------~~~~e~ 50 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVS------------------------------------DIQREV 50 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHH------------------------------------HHHHHH
Confidence 4699999999999996 479999999876543211000 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcce-eeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
..+.++.+. .++++ .+...+. .+..++||||++|.+|.++. ....++...+...+.++.
T Consensus 51 ~~l~~l~~~---------------~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~i~~~i~~~ 113 (277)
T cd06917 51 ALLSQLRQS---------------QPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLM--KAGPIAEKYISVIIREVLVA 113 (277)
T ss_pred HHHHHhccC---------------CCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHH--HccCCCHHHHHHHHHHHHHH
Confidence 555555420 11222 1112222 45568999999999998764 333445444444433333
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|++|.||+++. ++.++|+|||.+..+..
T Consensus 114 l~~lh~~~i~H~dl~p~ni~i~~--~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 114 LKYIHKVGVIHRDIKAANILVTN--TGNVKLCDFGVAALLNQ 153 (277)
T ss_pred HHHHHhCCcccCCcCHHHEEEcC--CCCEEEccCCceeecCC
Confidence 67889999999999999999994 58999999999887654
No 196
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.30 E-value=9.1e-12 Score=127.75 Aligned_cols=138 Identities=21% Similarity=0.199 Sum_probs=93.1
Q ss_pred cccccceeeeeEEEEec-CCC---EEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHH
Q 005995 124 TPLATASIAQVHRATLV-DGR---QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~---~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 199 (666)
+-||.|++|.||+|+.. +|+ .||||+.......... -+|.
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~ 53 (269)
T cd05065 10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQR------------------------------------RDFL 53 (269)
T ss_pred eEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHH------------------------------------HHHH
Confidence 56899999999999975 343 6999987654221110 0134
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHH
Q 005995 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (666)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~ 275 (666)
.|+..+..+.+ ..+++++. ....++||||++|++|.++........+...+...+.
T Consensus 54 ~e~~~l~~l~h--------------------~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ 113 (269)
T cd05065 54 SEASIMGQFDH--------------------PNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR 113 (269)
T ss_pred HHHHHHHhCCC--------------------cCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHH
Confidence 45555444322 12333332 4556899999999998876443333345555554444
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+++ +..+|..|++|+|+||.||+++ +++.++|+|||.+..+.
T Consensus 114 ~l~~al~~lH~~g~~H~dl~p~nili~--~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 114 GIAAGMKYLSEMNYVHRDLAARNILVN--SNLVCKVSDFGLSRFLE 157 (269)
T ss_pred HHHHHHHHHHHCCEeecccChheEEEc--CCCcEEECCCccccccc
Confidence 433 6788999999999999999998 45889999999987654
No 197
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.30 E-value=1.1e-11 Score=126.38 Aligned_cols=137 Identities=20% Similarity=0.246 Sum_probs=91.4
Q ss_pred ccccceeeeeEEEEec---CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 125 PLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~---~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
.||+|++|.||+|..+ +++.||||+.+........ . -++..|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~-------------------------~----------~~~~~e 46 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPAL-------------------------K----------DELLRE 46 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHH-------------------------H----------HHHHHH
Confidence 4899999999999753 6789999987643211100 0 013334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
...+.++.+ + .+.+++. ....++||||++|++|.++... ...++...+...+.++.
T Consensus 47 ~~~l~~l~h------------------~--~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~ 105 (257)
T cd05116 47 ANVMQQLDN------------------P--YIVRMIGICEAESWMLVMELAELGPLNKFLQK-NKHVTEKNITELVHQVS 105 (257)
T ss_pred HHHHHhCCC------------------C--CcceEEEEEcCCCcEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 444443322 1 2223332 3456899999999999876432 22345555555444443
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|+||.||+++. ++.++|+|||++..+.
T Consensus 106 ~al~~lH~~~i~H~dlkp~nill~~--~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 106 MGMKYLEETNFVHRDLAARNVLLVT--QHYAKISDFGLSKALG 146 (257)
T ss_pred HHHHHHHHCCEeecccchhhEEEcC--CCeEEECCCccccccC
Confidence 78899999999999999999984 5789999999987764
No 198
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.30 E-value=5.4e-12 Score=139.16 Aligned_cols=130 Identities=21% Similarity=0.150 Sum_probs=89.6
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
..||.|++|.||+|+.. +++.||||..... .+.+|+
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~-------------------------------------------~~~~E~ 211 (461)
T PHA03211 175 RALTPGSEGCVFESSHPDYPQRVVVKAGWYA-------------------------------------------SSVHEA 211 (461)
T ss_pred EEEccCCCeEEEEEEECCCCCEEEEeccccc-------------------------------------------CHHHHH
Confidence 57999999999999976 6899999942110 023455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++.| ..|.+++. ....+||||++.| .|.+........++...+...+.++.
T Consensus 212 ~iL~~L~H--------------------pnIv~l~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~ 270 (461)
T PHA03211 212 RLLRRLSH--------------------PAVLALLDVRVVGGLTCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLL 270 (461)
T ss_pred HHHHHCCC--------------------CCCCcEEEEEEECCEEEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 55555533 12233332 4556899999975 44443221222355666665555554
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|+||+|||++ .++.++|+|||+++.+.
T Consensus 271 ~aL~yLH~~gIvHrDLKP~NILl~--~~~~vkL~DFGla~~~~ 311 (461)
T PHA03211 271 SAIDYIHGEGIIHRDIKTENVLVN--GPEDICLGDFGAACFAR 311 (461)
T ss_pred HHHHHHHHCCEEECcCCHHHEEEC--CCCCEEEcccCCceecc
Confidence 7889999999999999999998 45889999999987654
No 199
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.30 E-value=1.2e-11 Score=125.67 Aligned_cols=140 Identities=13% Similarity=0.132 Sum_probs=94.3
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+.. +|+.|++|......... . ..-++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~---------------------------------~~~~~~~e~ 50 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNR--R---------------------------------EREEAIDEA 50 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCH--H---------------------------------HHHHHHHHH
Confidence 56999999999999975 78999999764321000 0 011234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRA 277 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~l~~~ 277 (666)
+.+.++++ ..+++++. ....++||||++|.+|.++.... ....+...+...+.++
T Consensus 51 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l 110 (256)
T cd08529 51 RVLAKLDS--------------------SYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQI 110 (256)
T ss_pred HHHHhcCC--------------------CCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 55444432 12222222 34568999999999998775432 2234455444444443
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
. +..+|..|++|+|+||.||+++ +++.++|+|||++..+..
T Consensus 111 ~~al~~lH~~~i~h~dl~~~nili~--~~~~~~l~df~~~~~~~~ 153 (256)
T cd08529 111 LLGLAHLHSKKILHRDIKSLNLFLD--AYDNVKIGDLGVAKLLSD 153 (256)
T ss_pred HHHHHHHHHCCcccCCCCcceEEEe--CCCCEEEcccccceeccC
Confidence 3 6788999999999999999999 458999999999887654
No 200
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.30 E-value=1.5e-11 Score=126.96 Aligned_cols=78 Identities=18% Similarity=0.162 Sum_probs=58.5
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
....++||||++|++|.+... ....+....+...+.+++ +..+|..|++|+|++|.||+++ .++.++|+|||++.
T Consensus 69 ~~~~~~v~e~~~g~~L~~~l~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~--~~~~~kl~dfg~~~ 145 (278)
T cd05606 69 PDKLSFILDLMNGGDLHYHLS-QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD--EHGHVRISDLGLAC 145 (278)
T ss_pred CCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEEC--CCCCEEEccCcCcc
Confidence 345689999999999876532 122345555544444443 6788999999999999999998 45889999999987
Q ss_pred ccC
Q 005995 317 KLS 319 (666)
Q Consensus 317 ~l~ 319 (666)
.+.
T Consensus 146 ~~~ 148 (278)
T cd05606 146 DFS 148 (278)
T ss_pred ccC
Confidence 654
No 201
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.30 E-value=1.4e-11 Score=127.88 Aligned_cols=138 Identities=16% Similarity=0.185 Sum_probs=90.7
Q ss_pred cccccceeeeeEEEEec------CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~------~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
+.||+|++|.||+|..+ .+..||||+........ ...+
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 55 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR------------------------------------ERIE 55 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHH------------------------------------HHHH
Confidence 57999999999999754 25589999765332100 1112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHc---------C
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF---------G 264 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~---------~ 264 (666)
+.+|...+.++.+ ..|++++. ....++||||++|++|.+...-... .
T Consensus 56 ~~~e~~~l~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~ 115 (288)
T cd05061 56 FLNEASVMKGFTC--------------------HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 115 (288)
T ss_pred HHHHHHHHHhCCC--------------------CCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCC
Confidence 4445555544422 22344432 4567999999999999887532110 1
Q ss_pred CCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 265 ~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.....+...+.++. +..+|..|++|+|+||.||+++ .++.++|+|||+++.+.
T Consensus 116 ~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~--~~~~~~L~Dfg~~~~~~ 170 (288)
T cd05061 116 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA--HDFTVKIGDFGMTRDIY 170 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc--CCCcEEECcCCcccccc
Confidence 12233333333332 6788999999999999999998 45899999999987653
No 202
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.30 E-value=9.9e-12 Score=127.48 Aligned_cols=78 Identities=17% Similarity=0.083 Sum_probs=56.0
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcC----CCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEec
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFG----VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDF 312 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~----~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDF 312 (666)
....++||||++|++|.++....... .+...+...+.++. +..+|..|++|+|+||.||+++ .+++++|+||
T Consensus 67 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~--~~~~~kl~df 144 (269)
T cd05042 67 SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLT--ADLSVKIGDY 144 (269)
T ss_pred CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEec--CCCcEEEecc
Confidence 45578999999999998764322111 12222333333332 6788999999999999999998 4589999999
Q ss_pred cccccc
Q 005995 313 GLTKKL 318 (666)
Q Consensus 313 G~~~~l 318 (666)
|++...
T Consensus 145 g~~~~~ 150 (269)
T cd05042 145 GLALEQ 150 (269)
T ss_pred cccccc
Confidence 998654
No 203
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.30 E-value=1.5e-11 Score=119.73 Aligned_cols=139 Identities=20% Similarity=0.275 Sum_probs=97.7
Q ss_pred cccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHHH
Q 005995 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (666)
Q Consensus 126 i~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 204 (666)
||+|++|+||+++.. +|++++||+.+++.... .+-.+.+|.+.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~------------------------------------~~~~~~~e~~~ 44 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS------------------------------------LLEELLREIEI 44 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh------------------------------------HHHHHHHHHHH
Confidence 689999999999975 48999999987764421 00113345445
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
+.++.+ ..+|.++. .+..+++|||++|.+|.++........+...+...+.++.
T Consensus 45 ~~~l~~--------------------~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 104 (215)
T cd00180 45 LKKLNH--------------------PNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEG 104 (215)
T ss_pred HHhcCC--------------------CCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 444422 34555543 3567899999999998877432212455555555444443
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+..+|..|++|+|++|+||+++.. +++++|+|||.+......
T Consensus 105 l~~lh~~~~~H~dl~~~ni~~~~~-~~~~~l~d~~~~~~~~~~ 146 (215)
T cd00180 105 LEYLHSNGIIHRDLKPENILLDSD-NGKVKLADFGLSKLLTSD 146 (215)
T ss_pred HHHHHhCCeeccCCCHhhEEEeCC-CCcEEEecCCceEEccCC
Confidence 678999999999999999999941 578999999999877654
No 204
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.30 E-value=4.7e-12 Score=135.86 Aligned_cols=128 Identities=15% Similarity=0.125 Sum_probs=86.3
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+.. +++.||+|+...+.. ..|+
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~-------------------------------------------~~E~ 108 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTT-------------------------------------------LIEA 108 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCcccc-------------------------------------------HHHH
Confidence 57999999999999975 678999997543211 1133
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++.| ..|++++. ....++|||++.| .+.+........++...+...+.+++
T Consensus 109 ~~l~~l~h--------------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~ 167 (357)
T PHA03209 109 MLLQNVNH--------------------PSVIRMKDTLVSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQIL 167 (357)
T ss_pred HHHHhCCC--------------------CCCcChhheEEeCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 33333322 12233321 3456899999976 44444322233455555555444443
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
+..+|..|++|||+||.|||++ .++.++|+|||++..
T Consensus 168 ~aL~~LH~~~ivHrDlkp~Nill~--~~~~~kl~DfG~a~~ 206 (357)
T PHA03209 168 EGLRYLHAQRIIHRDVKTENIFIN--DVDQVCIGDLGAAQF 206 (357)
T ss_pred HHHHHHHHCCeecCCCCHHHEEEC--CCCCEEEecCccccc
Confidence 7889999999999999999998 458899999999864
No 205
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.30 E-value=7.6e-12 Score=129.00 Aligned_cols=80 Identities=18% Similarity=0.140 Sum_probs=57.5
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCC-----CCceEEEe
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-----PHRPILLD 311 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~-----~~~i~liD 311 (666)
.+..+|||||++|++|..+.......++.......+.++. +..+|..|++|+|+||.||+++..+ ...+++.|
T Consensus 88 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d 167 (274)
T cd05076 88 GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSD 167 (274)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecC
Confidence 4567899999999998776432233345555444444443 7888999999999999999998431 12478999
Q ss_pred ccccccc
Q 005995 312 FGLTKKL 318 (666)
Q Consensus 312 FG~~~~l 318 (666)
||++...
T Consensus 168 ~g~~~~~ 174 (274)
T cd05076 168 PGVSFTA 174 (274)
T ss_pred Ccccccc
Confidence 9987543
No 206
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.30 E-value=8.3e-12 Score=132.56 Aligned_cols=138 Identities=17% Similarity=0.230 Sum_probs=89.4
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+.+...... .....+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~~E~ 50 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV-----------------------------------SDATRILREI 50 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccc-----------------------------------hhHHHHHHHH
Confidence 46999999999999965 79999999865321100 0011244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee------cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~ 275 (666)
+.+.+++| ++ +.+..++. ....++||||++| +|.+... ....++...+...+.
T Consensus 51 ~~l~~l~h------------------pniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~-~~~~~~~~~~~~i~~ 110 (338)
T cd07859 51 KLLRLLRH------------------PDIVEIKHIMLPPSRREFKDIYVVFELMES-DLHQVIK-ANDDLTPEHHQFFLY 110 (338)
T ss_pred HHHHhCCC------------------CCEeeecceEeccCCCCCceEEEEEecCCC-CHHHHHH-hcccCCHHHHHHHHH
Confidence 66655533 12 11222221 1235899999965 5554422 122345554444444
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
++. +..+|..|++|+|+||.|||++ .++.++|+|||++...
T Consensus 111 qi~~aL~~LH~~~ivH~dlkp~NIll~--~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 111 QLLRALKYIHTANVFHRDLKPKNILAN--ADCKLKICDFGLARVA 153 (338)
T ss_pred HHHHHHHHHHHCCeecCCCCHHHeEEC--CCCcEEEccCcccccc
Confidence 443 7788999999999999999998 4589999999998754
No 207
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.30 E-value=8.6e-12 Score=128.60 Aligned_cols=137 Identities=17% Similarity=0.170 Sum_probs=91.3
Q ss_pred cccccceeeeeEEEEecC------CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 124 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~------g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
+.||.|++|.||+|+..+ ++.||||+.+....... +-+
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~ 54 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDA------------------------------------RKD 54 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHH------------------------------------HHH
Confidence 569999999999998743 47899998754322111 112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH-----------
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 262 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~----------- 262 (666)
+.+|++.+.++.+ + .+.+++. ....++||||++|++|.+......
T Consensus 55 ~~~e~~~l~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~ 114 (280)
T cd05049 55 FEREAELLTNFQH------------------E--NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDS 114 (280)
T ss_pred HHHHHHHHHhcCC------------------C--CchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhccccc
Confidence 4456666555533 1 2222322 456799999999999987643211
Q ss_pred --cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 263 --FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 263 --~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
..+....+...+.++. +..+|..|++|+|++|+||+++. ++.++|+|||++..+
T Consensus 115 ~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~--~~~~kl~d~g~~~~~ 172 (280)
T cd05049 115 PMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGY--DLVVKIGDFGMSRDV 172 (280)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcC--CCeEEECCcccceec
Confidence 1122233333333333 67889999999999999999984 589999999998754
No 208
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.30 E-value=1.4e-11 Score=128.93 Aligned_cols=137 Identities=18% Similarity=0.178 Sum_probs=89.2
Q ss_pred cccccceeeeeEEEEec-CCCEE--EEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQV--VVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~V--AVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 200 (666)
+.||.|++|+||+|+.+ +|..+ ++|..+....... .-++.+
T Consensus 13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~------------------------------------~~~~~~ 56 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD------------------------------------HRDFAG 56 (303)
T ss_pred eeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHH------------------------------------HHHHHH
Confidence 57999999999999975 56654 6665433221110 011334
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH--------------
Q 005995 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-------------- 262 (666)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~-------------- 262 (666)
|...+.++.+ +..|++++. .+..+++|||++|++|.++.....
T Consensus 57 Ei~~l~~l~~-------------------h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 117 (303)
T cd05088 57 ELEVLCKLGH-------------------HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 117 (303)
T ss_pred HHHHHHHhcC-------------------CCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccc
Confidence 5555555421 123444443 455799999999999877643211
Q ss_pred -cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 263 -FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 263 -~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
..++...+...+.++. +..+|..|++|+|++|.|||++ .++.++|+|||++..
T Consensus 118 ~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~--~~~~~kl~dfg~~~~ 173 (303)
T cd05088 118 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG--ENYVAKIADFGLSRG 173 (303)
T ss_pred cCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec--CCCcEEeCccccCcc
Confidence 1233444444444443 7788999999999999999998 458899999999864
No 209
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.29 E-value=1.2e-11 Score=125.85 Aligned_cols=136 Identities=17% Similarity=0.141 Sum_probs=90.4
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||+|++|+||++.. +|+.||+|+.+..... -.+.+|..
T Consensus 12 ~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~~---------------------------------------~~~~~e~~ 51 (254)
T cd05083 12 EIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVTA---------------------------------------QAFLEETA 51 (254)
T ss_pred eeeccCCCCceEeccc-CCCceEEEeecCcchH---------------------------------------HHHHHHHH
Confidence 5799999999999975 7899999987543210 01333444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHHH--HH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 280 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~~--l~ 280 (666)
.+.++.+. .-+.+...+.....+++|||++|++|.++..... ...+...+...+.+++ +.
T Consensus 52 ~l~~~~~~-----------------~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~ 114 (254)
T cd05083 52 VMTKLHHK-----------------NLVRLLGVILHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGME 114 (254)
T ss_pred HHHhCCCC-----------------CcCeEEEEEcCCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHH
Confidence 44443220 0122222222455789999999999987743221 1234444444333333 67
Q ss_pred HhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 281 ~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
.+|..|++|+|+||+||+++ .++.++|+|||++...
T Consensus 115 ~lH~~~~~H~dl~p~nili~--~~~~~kl~Dfg~~~~~ 150 (254)
T cd05083 115 YLESKKLVHRDLAARNILVS--EDGVAKVSDFGLARVG 150 (254)
T ss_pred HHHhCCeeccccCcceEEEc--CCCcEEECCCccceec
Confidence 88999999999999999998 4589999999998754
No 210
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.29 E-value=9.3e-12 Score=129.94 Aligned_cols=136 Identities=15% Similarity=0.172 Sum_probs=93.0
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||.....-.... -.+.+|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-------------------------------------~~~~~e~ 67 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKK-------------------------------------ELIINEI 67 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchH-------------------------------------HHHHHHH
Confidence 46999999999999964 799999998653211100 0023344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+..+.+ + .+.+++. ....++||||++|.+|.+.. .....+...+...+.+++
T Consensus 68 ~~l~~~~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~~l~ 125 (297)
T cd06656 68 LVMRENKN------------------P--NIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECL 125 (297)
T ss_pred HHHHhCCC------------------C--CEeeEEEEEecCCEEEEeecccCCCCHHHHH--HhCCCCHHHHHHHHHHHH
Confidence 43333221 2 2333332 45578999999999988764 333445555555444443
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|+||.||+++ .++.++|+|||.+.....
T Consensus 126 ~~L~~LH~~~i~H~dL~p~Nili~--~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 126 QALDFLHSNQVIHRDIKSDNILLG--MDGSVKLTDFGFCAQITP 167 (297)
T ss_pred HHHHHHHHCCcccCCCCHHHEEEC--CCCCEEECcCccceEccC
Confidence 7788999999999999999998 458999999999877654
No 211
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.29 E-value=6e-12 Score=129.50 Aligned_cols=142 Identities=15% Similarity=0.101 Sum_probs=93.5
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
++||+|++|+||+|+.. +|+.||+|+..+.....-. .+-.+..|.
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~----------------------------------~~~~~~~e~ 52 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEK----------------------------------KVKYVKIEK 52 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHhccchH----------------------------------HHHHHHHHH
Confidence 57999999999999976 7999999987542110000 000122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++.. +..|++++. .+..++||||++|.+|.+...- ...++...+...+.++.
T Consensus 53 ~~~~~l~~-------------------~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~ql~ 112 (280)
T cd05581 53 EVLTRLNG-------------------HPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRK-YGSLDEKCTRFYAAEIL 112 (280)
T ss_pred HHHHhccc-------------------CCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 33333220 112333322 3456899999999999776431 22455555555544444
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+..+|..|++|+|++|+||+++ .++.++|+|||++..+...
T Consensus 113 ~~l~~Lh~~~~~H~dl~~~ni~i~--~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 113 LALEYLHSKGIIHRDLKPENILLD--KDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred HHHHHHHHCCeeecCCCHHHeEEC--CCCCEEecCCccccccCCc
Confidence 6788999999999999999998 4589999999998877543
No 212
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.29 E-value=1.5e-11 Score=137.55 Aligned_cols=112 Identities=14% Similarity=0.156 Sum_probs=77.0
Q ss_pred eeEeeecCCccCCChhhH-HHcCCCHHHHHHHHHHHH--HHHhhhcC--ccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 243 VLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 243 vLvmE~i~G~~L~~~~~~-~~~~~~~~~~~~~l~~~~--l~~i~~~g--~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
.|.||||.|+.|-|+..- ...++...+++.++.+.+ ...+|... ++|||||-+|||+. .+|..+|+|||.+..
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls--~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS--ADGNYKLCDFGSATT 195 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc--CCCCEEeCccccccc
Confidence 589999999888887532 233577777877777765 66778776 99999999999999 568999999999875
Q ss_pred c--CH---HHHHHHHHHHHHH--HcCCHHHHHHHHHHcCCccCCCc
Q 005995 318 L--SS---SMKQALAKMFFAA--AEGDHVALLSAFAEMGLRLRLDV 356 (666)
Q Consensus 318 l--~~---~~~~~~~~l~~a~--~~~d~~~~~~~~~~~g~~~~~~~ 356 (666)
. .. ..+..+-.=+... ......++++.+..+++..+.|+
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDI 241 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDI 241 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHH
Confidence 4 22 2222222222221 12334668888888887644443
No 213
>PRK10345 hypothetical protein; Provisional
Probab=99.29 E-value=2.3e-11 Score=119.54 Aligned_cols=141 Identities=13% Similarity=0.133 Sum_probs=88.6
Q ss_pred CccccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 122 VETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 122 ~~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
+.++||+|++|.||. .-.++.. +||+.+++-... +-++.+|
T Consensus 6 ~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~-------------------------------------~~~~~rE 46 (210)
T PRK10345 6 EQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGG-------------------------------------DKEIRRE 46 (210)
T ss_pred CcceecCCCceEEEE-CCCCcCe-EEEEEeccccch-------------------------------------HHHHHHH
Confidence 357899999999996 2235555 699987642110 0014456
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--cCC----C-e-eEeee--cCCccCCChhhHHHcCCCHH-HH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSE----T-V-LILEF--MDGIRLNDCESLEAFGVNKQ-KV 270 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~~~----~-v-LvmE~--i~G~~L~~~~~~~~~~~~~~-~~ 270 (666)
.+.+..+.+. +.....|+++|. .++ . + +|||| ++|++|.++.. ...++.. ..
T Consensus 47 i~~l~~L~~~---------------~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~--~~~~~e~~~~ 109 (210)
T PRK10345 47 LKYYAHLSRR---------------LIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAE--QCRYEEDVAQ 109 (210)
T ss_pred HHHHHHhhcc---------------CCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHH--cccccHhHHH
Confidence 5655555431 112345788775 222 2 2 78999 55788888753 2223322 22
Q ss_pred HHHHHHHHHHHhhhcCccccCCCcCceEEeeC--CCCceEEEeccccccc
Q 005995 271 VEEITRAYAHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKL 318 (666)
Q Consensus 271 ~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~--~~~~i~liDFG~~~~l 318 (666)
...++..+.+.+|.+|++|+|+||+|||++.. ++++++|+|||-...+
T Consensus 110 ~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~ 159 (210)
T PRK10345 110 LRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF 159 (210)
T ss_pred HHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence 44455555789999999999999999999853 2347999994444443
No 214
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.29 E-value=1.5e-11 Score=131.14 Aligned_cols=156 Identities=17% Similarity=0.235 Sum_probs=98.5
Q ss_pred HHHhCCChhccccccC-ccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHH
Q 005995 107 EREFGESMGGMFMDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPI 184 (666)
Q Consensus 107 ~~~~g~~~~~~f~~~~-~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~ 184 (666)
++|.+..+.++...|+ -+.||+|++|.||+|... +|+.||||+.+.......
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------------------------- 56 (343)
T cd07880 3 RQEVNKTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSEL-------------------------- 56 (343)
T ss_pred hhhhhhhhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchH--------------------------
Confidence 4555555555544443 468999999999999864 899999998753211100
Q ss_pred HHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-------cCCCeeEeeecCCccCCCh
Q 005995 185 IDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDC 257 (666)
Q Consensus 185 ~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-------~~~~vLvmE~i~G~~L~~~ 257 (666)
... .+.+|...+.++.+. .-+.+..++. ....++||||+ |.+|.++
T Consensus 57 ---~~~------~~~~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~ 109 (343)
T cd07880 57 ---FAK------RAYRELRLLKHMKHE-----------------NVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKL 109 (343)
T ss_pred ---HHH------HHHHHHHHHHhcCCC-----------------CccceeeeecCCccccccceEEEEEecC-CCCHHHH
Confidence 000 123355555544331 0111222221 23458999999 6566654
Q ss_pred hhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 258 ESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 258 ~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
. ....++...+...+.++. +..+|..|++|+|++|+||+++ +++.++|+|||++....
T Consensus 110 ~--~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~--~~~~~kl~dfg~~~~~~ 169 (343)
T cd07880 110 M--KHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN--EDCELKILDFGLARQTD 169 (343)
T ss_pred H--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEeecccccccc
Confidence 3 233455555544444443 7788999999999999999998 45889999999987654
No 215
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.29 E-value=7.7e-12 Score=127.76 Aligned_cols=140 Identities=18% Similarity=0.193 Sum_probs=93.8
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|..+ +|+.||+|+...+...... -++.+|.
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~e~ 50 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQ------------------------------------KQILREL 50 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHH------------------------------------HHHHHHH
Confidence 47999999999999976 7899999987654322111 0122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++.+ ..+++++ . .+..+++|||++|.+|.++.......++...+...+.++.
T Consensus 51 ~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~ 110 (265)
T cd06605 51 DILHKCNS--------------------PYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVL 110 (265)
T ss_pred HHHHHCCC--------------------CchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHH
Confidence 33333221 1122221 1 4556899999999999887543223344444444444443
Q ss_pred --HHHhhh-cCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 279 --AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 279 --l~~i~~-~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+..+|. .|++|+|+||+||+++. ++.++|+|||.+..+...
T Consensus 111 ~~l~~lH~~~~i~H~dl~~~ni~~~~--~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 111 KGLTYLHEKHKIIHRDVKPSNILVNS--RGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred HHHHHHcCCCCeecCCCCHHHEEECC--CCCEEEeecccchhhHHH
Confidence 678899 99999999999999994 588999999998776443
No 216
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=99.29 E-value=3.7e-11 Score=116.35 Aligned_cols=70 Identities=37% Similarity=0.708 Sum_probs=55.7
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
++..+|+|||++|.++.+...+. +.+.+.+.+ .+.++|.+|++|+||||||++++ ++.+.+|||+..+..
T Consensus 115 ~~~~~ll~EYIeG~~l~d~~~i~------e~~~~ki~~-~ikqlH~~G~~HGD~hpgNFlv~---~~~i~iID~~~k~~~ 184 (229)
T PF06176_consen 115 TSSYVLLMEYIEGVELNDIEDID------EDLAEKIVE-AIKQLHKHGFYHGDPHPGNFLVS---NNGIRIIDTQGKRMS 184 (229)
T ss_pred eeEEEEEEEEecCeecccchhcC------HHHHHHHHH-HHHHHHHcCCccCCCCcCcEEEE---CCcEEEEECcccccc
Confidence 56678999999999999875432 234444443 57999999999999999999998 356999999987754
No 217
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.29 E-value=1.6e-11 Score=126.90 Aligned_cols=134 Identities=21% Similarity=0.217 Sum_probs=89.7
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+...+..... +-.+.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~------------------------------------~~~~~~E~ 50 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVEL------------------------------------QKQIMSEL 50 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHH------------------------------------HHHHHHHH
Confidence 47999999999999864 789999998754321110 01134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++.+ + .+.+++. ....+|||||++|.++.... ..+...+...+.+++
T Consensus 51 ~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~ 105 (279)
T cd06619 51 EILYKCDS------------------P--YIIGFYGAFFVENRISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVV 105 (279)
T ss_pred HHHHhCCC------------------C--CeeeEEEEEEECCEEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHH
Confidence 55444322 1 2223222 34568999999999886432 123333333333333
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|+||.||+++ .++.++|+|||++..+..
T Consensus 106 ~~l~~lH~~~i~H~dlkp~Nill~--~~~~~~l~dfg~~~~~~~ 147 (279)
T cd06619 106 KGLTYLWSLKILHRDVKPSNMLVN--TRGQVKLCDFGVSTQLVN 147 (279)
T ss_pred HHHHHHHHCCEeeCCCCHHHEEEC--CCCCEEEeeCCcceeccc
Confidence 6788999999999999999998 458999999999887643
No 218
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.28 E-value=1.4e-11 Score=131.08 Aligned_cols=51 Identities=16% Similarity=0.206 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 267 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 267 ~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
...+...+.++. +..+|..|++|+|+||.|||++. ++.++|+|||++..+.
T Consensus 172 ~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~--~~~vkL~DfG~a~~~~ 224 (337)
T cd05054 172 LEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIY 224 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeC--CCcEEEeccccchhcc
Confidence 333444444433 77889999999999999999984 5889999999988764
No 219
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.28 E-value=1.6e-11 Score=126.56 Aligned_cols=138 Identities=16% Similarity=0.185 Sum_probs=89.9
Q ss_pred cccccceeeeeEEEEec------CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~------~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
+.||.|++|+||+|... +++.||||+.+....... ..+
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~------------------------------------~~~ 55 (277)
T cd05062 12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRE------------------------------------RIE 55 (277)
T ss_pred eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHH------------------------------------HHH
Confidence 56999999999999753 357899998654321100 011
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHc---------C
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF---------G 264 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~---------~ 264 (666)
+.+|...+..+++ ..|++++. .+..++||||++|++|.++..-... .
T Consensus 56 ~~~e~~~l~~l~~--------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ 115 (277)
T cd05062 56 FLNEASVMKEFNC--------------------HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAP 115 (277)
T ss_pred HHHHHHHHHhCCC--------------------CCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccC
Confidence 3445444443321 22333332 4567899999999999876432111 1
Q ss_pred CCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 265 ~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.+...+...+.++. +..+|..|++|+|+||.||+++ +++.++|+|||++..+.
T Consensus 116 ~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~--~~~~~~l~dfg~~~~~~ 170 (277)
T cd05062 116 PSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA--EDFTVKIGDFGMTRDIY 170 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc--CCCCEEECCCCCccccC
Confidence 22334444433333 6788999999999999999999 45899999999987653
No 220
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.28 E-value=1.7e-11 Score=125.68 Aligned_cols=139 Identities=14% Similarity=0.099 Sum_probs=93.6
Q ss_pred ccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
...||.|++|.||+|+.. +++.|+||.......... -.+.+|
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~-------------------------------------~~~~~e 55 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYV-------------------------------------QPLHEE 55 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHH-------------------------------------HHHHHH
Confidence 357999999999999965 688999997654322110 013445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCC--CHHHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGV--NKQKVVEEIT 275 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~--~~~~~~~~l~ 275 (666)
+..+.++++ + .+.+++. ....+++|||++|.+|.+......... +...+...+.
T Consensus 56 ~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 115 (268)
T cd06624 56 IALHSYLKH------------------R--NIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTK 115 (268)
T ss_pred HHHHHhcCC------------------C--CeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHH
Confidence 555555432 1 2223332 345689999999999987644222222 4444444333
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
++. +..+|..|++|+|+||.||+++.+ ++.++|+|||++..+.
T Consensus 116 qi~~al~~lH~~~i~h~dl~p~nil~~~~-~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 116 QILEGLKYLHDNQIVHRDIKGDNVLVNTY-SGVVKISDFGTSKRLA 160 (268)
T ss_pred HHHHHHHHHHHCCEeecCCCHHHEEEcCC-CCeEEEecchhheecc
Confidence 433 778899999999999999999753 5789999999987653
No 221
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.28 E-value=2.1e-11 Score=124.40 Aligned_cols=139 Identities=22% Similarity=0.223 Sum_probs=93.8
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||.|++|.||+|...++..||+|+.+++-.. .-++.+|.+
T Consensus 12 ~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~--------------------------------------~~~~~~e~~ 53 (260)
T cd05073 12 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS--------------------------------------VEAFLAEAN 53 (260)
T ss_pred eEecCccceEEEEEEecCCccEEEEecCCChhH--------------------------------------HHHHHHHHH
Confidence 579999999999999877888999987654211 001344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHHHHHHH--HH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AH 280 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~l~~~~--l~ 280 (666)
.+.++.+. .-+.+.........+++|||++|.+|.++.... ....+...+...+.++. +.
T Consensus 54 ~l~~l~~~-----------------~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~ 116 (260)
T cd05073 54 VMKTLQHD-----------------KLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 116 (260)
T ss_pred HHHhcCCC-----------------CcceEEEEEcCCCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHH
Confidence 55544321 112222222245568999999999987764321 11233344444343433 67
Q ss_pred HhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 281 ~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.+|..|++|+|++|.||+++ +++.++|+|||.+..+.
T Consensus 117 ~lH~~~i~H~dl~p~ni~i~--~~~~~~l~d~~~~~~~~ 153 (260)
T cd05073 117 FIEQRNYIHRDLRAANILVS--ASLVCKIADFGLARVIE 153 (260)
T ss_pred HHHhCCccccccCcceEEEc--CCCcEEECCCcceeecc
Confidence 88999999999999999998 46899999999987764
No 222
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.28 E-value=1.5e-11 Score=126.29 Aligned_cols=139 Identities=18% Similarity=0.181 Sum_probs=93.0
Q ss_pred cccccceeeeeEEEEecCC----CEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHH
Q 005995 124 TPLATASIAQVHRATLVDG----RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g----~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 199 (666)
+.||.|++|.||+|+..+. ..|+||+.+........ -.+.
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~------------------------------------~~~~ 55 (270)
T cd05056 12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVR------------------------------------EKFL 55 (270)
T ss_pred eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHH------------------------------------HHHH
Confidence 5799999999999987532 46899976554321110 0133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---ecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHH
Q 005995 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (666)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~ 276 (666)
+|+..+.++.+ ..+.+.+ .....+++|||++|++|.++.......++...+...+.+
T Consensus 56 ~e~~~l~~~~h--------------------~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 115 (270)
T cd05056 56 QEAYIMRQFDH--------------------PHIVKLIGVITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQ 115 (270)
T ss_pred HHHHHHHhCCC--------------------CchhceeEEEcCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHH
Confidence 45555444432 1222232 245678999999999998875322223455444444444
Q ss_pred HH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 277 ~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
++ +..+|..|++|+|++|.||+++ .++.++|+|||++..+..
T Consensus 116 l~~~l~~lH~~~~~H~dl~p~nili~--~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 116 LSTALAYLESKRFVHRDIAARNVLVS--SPDCVKLGDFGLSRYLED 159 (270)
T ss_pred HHHHHHHHHhCCeeccccChheEEEe--cCCCeEEccCceeeeccc
Confidence 33 6788999999999999999998 458899999999887654
No 223
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.28 E-value=1.6e-11 Score=126.82 Aligned_cols=137 Identities=16% Similarity=0.230 Sum_probs=91.2
Q ss_pred cccccceeeeeEEEEecC------CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 124 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~------g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
+.||.|++|.||+|.... +..||+|..+......... +
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~------------------------------------~ 54 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQ------------------------------------E 54 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHH------------------------------------H
Confidence 579999999999998642 2579999876543211110 1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH-----------
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 262 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~----------- 262 (666)
|.+|.+.+.++.+ ..+.+++. ....+++|||++|++|.++.....
T Consensus 55 ~~~ei~~l~~l~h--------------------~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 114 (283)
T cd05048 55 FRQEAELMSDLQH--------------------PNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGD 114 (283)
T ss_pred HHHHHHHHHhcCC--------------------cccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCccccccccc
Confidence 3445555544432 12333332 345689999999999877643211
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 263 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 263 ----~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
..++...+...+.++. +..+|..|++|+|+||+||+++ +++.++|+|||++...
T Consensus 115 ~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~--~~~~~~L~dfg~~~~~ 174 (283)
T cd05048 115 ETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG--EGLTVKISDFGLSRDI 174 (283)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc--CCCcEEECCCcceeec
Confidence 1233444444444433 6788999999999999999998 4588999999998765
No 224
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.28 E-value=1.7e-11 Score=125.86 Aligned_cols=139 Identities=23% Similarity=0.235 Sum_probs=91.1
Q ss_pred cccccceeeeeEEEEecC-CC--EEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHH
Q 005995 124 TPLATASIAQVHRATLVD-GR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~-g~--~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 200 (666)
+.||+|++|.||+|+..+ ++ .||||..+......- +. -++..
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~--~~---------------------------------~~~~~ 49 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRS--EM---------------------------------EDFLS 49 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHH--HH---------------------------------HHHHH
Confidence 468999999999999753 43 699998765432110 00 01344
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----------cCCCeeEeeecCCccCCChhhHHH-----cCC
Q 005995 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----------SSETVLILEFMDGIRLNDCESLEA-----FGV 265 (666)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----------~~~~vLvmE~i~G~~L~~~~~~~~-----~~~ 265 (666)
|...+.++++ ..|++++. ....+++|||++|++|.+...... ..+
T Consensus 50 E~~~l~~l~h--------------------~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~ 109 (272)
T cd05075 50 EAVCMKEFDH--------------------PNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYL 109 (272)
T ss_pred HHHHHHhCCC--------------------CCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccC
Confidence 6556555432 12222221 123589999999998876643221 123
Q ss_pred CHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 266 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 266 ~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+...+...+.++. +..+|..|++|+|+||.||+++ .++.++|+|||+++.+.
T Consensus 110 ~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~--~~~~~kl~Dfg~~~~~~ 163 (272)
T cd05075 110 PTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLN--ENMNVCVADFGLSKKIY 163 (272)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEc--CCCCEEECCCCcccccC
Confidence 4444444444433 7788999999999999999998 45889999999988764
No 225
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.28 E-value=2.1e-11 Score=126.00 Aligned_cols=137 Identities=15% Similarity=0.164 Sum_probs=92.9
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
..||+|++|.||+|... +|..|++|........... ++.+|.
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~-------------------------------------~~~~e~ 53 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELE-------------------------------------DYMVEI 53 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHH-------------------------------------HHHHHH
Confidence 45999999999999976 6788999987543221110 133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+..+.+ + .+++++ . ....++||||++|.++.+........++...+...+.++.
T Consensus 54 ~~l~~l~h------------------~--~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~ 113 (282)
T cd06643 54 DILASCDH------------------P--NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTL 113 (282)
T ss_pred HHHHHCCC------------------C--CeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 44444322 1 223332 2 4556899999999988765322223455555555544444
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|++|.||+++ .+++++|+|||++....
T Consensus 114 ~~L~~LH~~~i~H~dlkp~nili~--~~~~~kl~dfg~~~~~~ 154 (282)
T cd06643 114 EALNYLHENKIIHRDLKAGNILFT--LDGDIKLADFGVSAKNT 154 (282)
T ss_pred HHHHHHHHCCeeecCCCcccEEEc--cCCCEEEcccccccccc
Confidence 7788999999999999999998 45899999999987654
No 226
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.28 E-value=1.6e-11 Score=124.91 Aligned_cols=136 Identities=21% Similarity=0.216 Sum_probs=91.2
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||+|++|.||+|.. .|+.||+|..+.+... -++.+|+.
T Consensus 12 ~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~~~---------------------------------------~~~~~e~~ 51 (256)
T cd05082 12 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA---------------------------------------QAFLAEAS 51 (256)
T ss_pred eeecccCCCeEEEEEE-cCCcEEEEEeCCCchH---------------------------------------HHHHHHHH
Confidence 5699999999999986 5889999986532110 01344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee--cCCCeeEeeecCCccCCChhhHHHc-CCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~~~~~l~~~~- 278 (666)
.+.++.+ ++ +.+...+. .+..+++|||++|++|.+....... ..+...+...+.++.
T Consensus 52 ~l~~l~~------------------~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~ 113 (256)
T cd05082 52 VMTQLRH------------------SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 113 (256)
T ss_pred HHHhCCC------------------CCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 5555432 11 11111121 3456899999999999876432211 134444444444433
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|++|+||+++ .++.++|+|||++....
T Consensus 114 ~l~~lH~~~i~H~dlkp~nil~~--~~~~~kl~dfg~~~~~~ 153 (256)
T cd05082 114 AMEYLEANNFVHRDLAARNVLVS--EDNVAKVSDFGLTKEAS 153 (256)
T ss_pred HHHHHHhCCEeccccchheEEEc--CCCcEEecCCccceecc
Confidence 7789999999999999999998 45899999999987653
No 227
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.28 E-value=5e-12 Score=134.22 Aligned_cols=137 Identities=20% Similarity=0.212 Sum_probs=102.3
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||+|-||.||.+....+..||||..||+..+.... ||..|++
T Consensus 544 ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~------------------------------------~F~kEIk 587 (807)
T KOG1094|consen 544 EKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARN------------------------------------DFLKEIK 587 (807)
T ss_pred hhhcCcccceeEEEEecCceEEEEeecCcccchhHHH------------------------------------HHHHHHH
Confidence 6799999999999998777999999999987654322 3677888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-c---CCCeeEeeecCCccCCChhhHHHcC-CCHHHHHHHHHHHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S---SETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITRAY 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~---~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~~~~~l~~~~ 278 (666)
.+.++++ ..|-++.. | ...+++|||++.+.|.++....... .+.........+++
T Consensus 588 iLsqLkh--------------------PNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqia 647 (807)
T KOG1094|consen 588 ILSRLKH--------------------PNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIA 647 (807)
T ss_pred HHhccCC--------------------CCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHH
Confidence 8887743 33444443 3 4458999999999998875432212 23344444555554
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+-..+|+|||+-|.|+||+ +++++++.||||++.+
T Consensus 648 sgmaYLes~nfVHrd~a~rNcLv~--~e~~iKiadfgmsR~l 687 (807)
T KOG1094|consen 648 SGMAYLESLNFVHRDLATRNCLVD--GEFTIKIADFGMSRNL 687 (807)
T ss_pred HHHHHHHhhchhhccccccceeec--CcccEEecCccccccc
Confidence 5566678999999999999999 5699999999999965
No 228
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.28 E-value=1.9e-11 Score=127.87 Aligned_cols=80 Identities=15% Similarity=0.178 Sum_probs=57.9
Q ss_pred cCCCeeEeeecCCccCCChhhHHH---------------cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEee
Q 005995 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~---------------~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~ 301 (666)
....+++|||++|++|.++..... ..++...+...+.+++ +..+|..|++|+|+||.||+++
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~- 171 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT- 171 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEc-
Confidence 345689999999999887643211 1122333333333333 6788999999999999999998
Q ss_pred CCCCceEEEecccccccCH
Q 005995 302 DPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 302 ~~~~~i~liDFG~~~~l~~ 320 (666)
.++.++|+|||.+..+..
T Consensus 172 -~~~~~kl~D~g~~~~~~~ 189 (304)
T cd05101 172 -ENNVMKIADFGLARDVNN 189 (304)
T ss_pred -CCCcEEECCCccceeccc
Confidence 458999999999887643
No 229
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.28 E-value=1.7e-11 Score=135.29 Aligned_cols=75 Identities=20% Similarity=0.221 Sum_probs=51.0
Q ss_pred eeEeeecCCccCCChhh-H--HHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 243 VLILEFMDGIRLNDCES-L--EAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 243 vLvmE~i~G~~L~~~~~-~--~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
++||||++| ++.+... . ....++...+...+.+++ +..+|..|++|||+||.|||++.+ ++.++|+|||+++.
T Consensus 143 ~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~-~~~vkL~DFGla~~ 220 (440)
T PTZ00036 143 NVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPN-THTLKLCDFGSAKN 220 (440)
T ss_pred EEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCC-CCceeeeccccchh
Confidence 589999987 3433321 1 112233434333333333 778999999999999999999843 35799999999986
Q ss_pred cC
Q 005995 318 LS 319 (666)
Q Consensus 318 l~ 319 (666)
+.
T Consensus 221 ~~ 222 (440)
T PTZ00036 221 LL 222 (440)
T ss_pred cc
Confidence 64
No 230
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.27 E-value=2e-11 Score=131.39 Aligned_cols=73 Identities=19% Similarity=0.390 Sum_probs=53.3
Q ss_pred CCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 241 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
..++||||++|. +.+.. ....+...+...+.+++ +..+|..|++|+|+||.|||++ .++.++|+|||+++..
T Consensus 103 ~~~lv~e~~~~~-l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~--~~~~~kL~DfG~a~~~ 176 (364)
T cd07875 103 DVYIVMELMDAN-LCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTA 176 (364)
T ss_pred eEEEEEeCCCCC-HHHHH---HhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEEC--CCCcEEEEeCCCcccc
Confidence 358999999873 33321 22345455444444443 7789999999999999999998 4589999999998765
Q ss_pred C
Q 005995 319 S 319 (666)
Q Consensus 319 ~ 319 (666)
.
T Consensus 177 ~ 177 (364)
T cd07875 177 G 177 (364)
T ss_pred C
Confidence 3
No 231
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.27 E-value=1.6e-11 Score=126.73 Aligned_cols=138 Identities=21% Similarity=0.224 Sum_probs=94.4
Q ss_pred cccccceeeeeEEEEec-----CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 124 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-----~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
+.||+|++|.||+|+.. +|+.||||+.++..... .+-+|
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~------------------------------------~~~~~ 53 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQ------------------------------------HRSDF 53 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchH------------------------------------HHHHH
Confidence 57999999999999863 47899999987643320 01123
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee------cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHH
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~ 272 (666)
.+|.+.+..+.+ ..+++++. ....+++|||++|.+|.+.........+...+..
T Consensus 54 ~~ei~~l~~l~~--------------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~ 113 (284)
T cd05038 54 EREIEILRTLDH--------------------ENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLL 113 (284)
T ss_pred HHHHHHHHhCCC--------------------CChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHH
Confidence 444444444322 12233322 1245899999999999877533222355555555
Q ss_pred HHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 273 ~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.+.++. +..+|..|++|+|++|.||+++ .++.++|+|||++..+.
T Consensus 114 ~~~~l~~aL~~lH~~~i~H~dl~p~nil~~--~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 114 FSSQICKGMDYLGSQRYIHRDLAARNILVE--SEDLVKISDFGLAKVLP 160 (284)
T ss_pred HHHHHHHHHHHHHhCCeecCCCCHHhEEEc--CCCCEEEcccccccccc
Confidence 444443 6788999999999999999998 45899999999998775
No 232
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.27 E-value=1.4e-11 Score=126.16 Aligned_cols=138 Identities=15% Similarity=0.148 Sum_probs=92.3
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+.. +|+.||||+.+........ .+.+|.
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~-------------------------------------~~~~e~ 57 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFA-------------------------------------VVQQEI 57 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHH-------------------------------------HHHHHH
Confidence 56999999999999865 7899999998654321100 022233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
..+..+.+ ++ +.+...+. ....+++|||++|.+|.++... ....+...+...+.+++
T Consensus 58 ~~~~~l~h------------------~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~ 118 (267)
T cd06645 58 IMMKDCKH------------------SNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHV-TGPLSESQIAYVSRETLQG 118 (267)
T ss_pred HHHHhCCC------------------CCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 33333221 11 11212222 4556899999999999876432 22345555555555444
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|++|+||+++ .++.++|+|||++..+.
T Consensus 119 l~~lH~~~i~H~dlkp~nili~--~~~~~~l~dfg~~~~~~ 157 (267)
T cd06645 119 LYYLHSKGKMHRDIKGANILLT--DNGHVKLADFGVSAQIT 157 (267)
T ss_pred HHHHHHCCeecCCCCHHHEEEC--CCCCEEECcceeeeEcc
Confidence 6788999999999999999998 45889999999987664
No 233
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.27 E-value=2.5e-11 Score=123.72 Aligned_cols=77 Identities=19% Similarity=0.292 Sum_probs=57.7
Q ss_pred CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 240 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
...+++|||++|.+|.++... ...++...+...+.+++ +..+|..|++|+|++|.||+++. ++.++|+|||++..
T Consensus 70 ~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~ 146 (260)
T cd05611 70 DYLYLVMEYLNGGDCASLIKT-LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQ--TGHLKLTDFGLSRN 146 (260)
T ss_pred CeEEEEEeccCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCcEEEeeccccee
Confidence 456899999999999876432 12344444444444433 67889999999999999999984 58899999998875
Q ss_pred cC
Q 005995 318 LS 319 (666)
Q Consensus 318 l~ 319 (666)
..
T Consensus 147 ~~ 148 (260)
T cd05611 147 GL 148 (260)
T ss_pred cc
Confidence 43
No 234
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.27 E-value=1.6e-11 Score=127.99 Aligned_cols=79 Identities=22% Similarity=0.230 Sum_probs=57.5
Q ss_pred cCCCeeEeeecCCccCCChhhHHHc----------CCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAF----------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHR 306 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~----------~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~ 306 (666)
....+++|||++|++|.++...... .++...+...+.++. +..+|..|++|+|+||.||+++ .++.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~--~~~~ 168 (296)
T cd05095 91 SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVG--KNYT 168 (296)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEc--CCCC
Confidence 4567899999999999876432110 122233444444433 7788999999999999999998 4588
Q ss_pred eEEEecccccccC
Q 005995 307 PILLDFGLTKKLS 319 (666)
Q Consensus 307 i~liDFG~~~~l~ 319 (666)
++|+|||++..+.
T Consensus 169 ~~l~dfg~~~~~~ 181 (296)
T cd05095 169 IKIADFGMSRNLY 181 (296)
T ss_pred EEeccCccccccc
Confidence 9999999988653
No 235
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.27 E-value=2e-11 Score=124.97 Aligned_cols=80 Identities=13% Similarity=0.078 Sum_probs=57.3
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCC-----CceEEEe
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP-----HRPILLD 311 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~-----~~i~liD 311 (666)
....+++|||++|++|..........++...+...+.++. +..+|..|++|+|+||.|||++.++. ..++++|
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 4567999999999988766432222345555544444443 77889999999999999999984321 1278999
Q ss_pred ccccccc
Q 005995 312 FGLTKKL 318 (666)
Q Consensus 312 FG~~~~l 318 (666)
||++..+
T Consensus 156 ~g~~~~~ 162 (262)
T cd05077 156 PGIPITV 162 (262)
T ss_pred CCCCccc
Confidence 9987654
No 236
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.27 E-value=1.6e-11 Score=125.55 Aligned_cols=141 Identities=16% Similarity=0.143 Sum_probs=92.8
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|... +|+.||+|..++.-..... ..-.+.+|.
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~----------------------------------~~~~~~~ei 53 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAK----------------------------------ARQDCLKEI 53 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeecccccchh----------------------------------hHHHHHHHH
Confidence 57999999999999986 8999999987531100000 001133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHH---HcCCCHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEIT 275 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~~~~~l~ 275 (666)
+.+.++.+ ..++.++ . ....+++|||++|++|.+...-. ...++...+...+.
T Consensus 54 ~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 113 (267)
T cd08224 54 DLLKQLDH--------------------PNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFV 113 (267)
T ss_pred HHHHhCCC--------------------CCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHH
Confidence 44444322 1222222 1 34568999999999987764211 11234445554444
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+++ +..+|..|++|+|++|.||+++ .++.++|+|||++..+..
T Consensus 114 ~l~~~l~~lh~~~i~h~dl~p~nil~~--~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 114 QLCSALEHMHSKRIMHRDIKPANVFIT--ATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred HHHHHHHHHHhCCEecCCcChhhEEEC--CCCcEEEeccceeeeccC
Confidence 444 6788999999999999999998 458899999999876643
No 237
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.27 E-value=6.9e-12 Score=114.72 Aligned_cols=137 Identities=18% Similarity=0.192 Sum_probs=85.6
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCC-----hHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQG-----IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~-----~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
+.||.|.+|.|++|+.+ +++-||+|-.|-+ ++...- +|+-
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrlddddegvpssal----------------------------------reic 53 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSAL----------------------------------REIC 53 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHH----------------------------------HHHH
Confidence 46999999999999976 6899999977632 322222 2232
Q ss_pred HHHHHH--HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHH
Q 005995 198 FNSEAE--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (666)
Q Consensus 198 ~~~Ea~--n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~ 275 (666)
+..|.+ |+.++...+. ...+..||.|||+- .|..+-..-...+|.+.+-.-+.
T Consensus 54 llkelkhknivrl~dvlh------------------------sdkkltlvfe~cdq-dlkkyfdslng~~d~~~~rsfml 108 (292)
T KOG0662|consen 54 LLKELKHKNIVRLHDVLH------------------------SDKKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFML 108 (292)
T ss_pred HHHHhhhcceeehhhhhc------------------------cCceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHH
Confidence 333332 3333333221 13445799999974 22221111112344443333334
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+.. +...|.+++.|||+||.|+++. .+|.++|.|||+++.+.-.
T Consensus 109 qllrgl~fchshnvlhrdlkpqnllin--~ngelkladfglarafgip 154 (292)
T KOG0662|consen 109 QLLRGLGFCHSHNVLHRDLKPQNLLIN--RNGELKLADFGLARAFGIP 154 (292)
T ss_pred HHHhhhhhhhhhhhhhccCCcceEEec--cCCcEEecccchhhhcCCc
Confidence 433 4556779999999999999999 4699999999999876533
No 238
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.27 E-value=2e-11 Score=123.60 Aligned_cols=141 Identities=18% Similarity=0.157 Sum_probs=95.7
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
++||+|++|.||+|+.. +|+.|+||......... .+ .+ ++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~-----------------------~~----------~~~~e~ 50 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKE--EA-----------------------LK----------SIMQEI 50 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccCH--HH-----------------------HH----------HHHHHH
Confidence 68999999999999875 68899999876532110 00 00 133454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++++ + .++.++ . ....+++|||++|.+|.+..... ..++...+...+.+++
T Consensus 51 ~~l~~l~~------------------~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~ 109 (254)
T cd06627 51 DLLKNLKH------------------P--NIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVL 109 (254)
T ss_pred HHHHhCCC------------------C--CccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHH
Confidence 44444432 1 122222 2 45568999999999888764321 3345555555444444
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~ 322 (666)
+..+|..|++|+|++|+||+++. ++.++|+|||.+.......
T Consensus 110 ~~l~~lH~~~i~H~dl~p~ni~i~~--~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 110 QGLAYLHEQGVIHRDIKAANILTTK--DGVVKLADFGVATKLNDVS 153 (254)
T ss_pred HHHHHHhhCCcccCCCCHHHEEECC--CCCEEEeccccceecCCCc
Confidence 67889999999999999999984 5899999999998876543
No 239
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.27 E-value=9.1e-12 Score=134.44 Aligned_cols=134 Identities=16% Similarity=0.185 Sum_probs=92.2
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCCh------HHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhh
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGI------KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~------~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 196 (666)
+.+|.||-|.|-.|+.. +|+.+||||+.... ...++.
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~Ier------------------------------------ 61 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIER------------------------------------ 61 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhh------------------------------------
Confidence 56999999999999964 89999999874321 111222
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHH
Q 005995 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (666)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~ 275 (666)
|.-.++-+.| ...+..=.|+. ....+||.||++|+-|-++. +.+.++...+.+.-+.
T Consensus 62 ----EIviMkLi~H-----------------pnVl~LydVwe~~~~lylvlEyv~gGELFdyl-v~kG~l~e~eaa~ff~ 119 (786)
T KOG0588|consen 62 ----EIVIMKLIEH-----------------PNVLRLYDVWENKQHLYLVLEYVPGGELFDYL-VRKGPLPEREAAHFFR 119 (786)
T ss_pred ----hhHHHHHhcC-----------------CCeeeeeeeeccCceEEEEEEecCCchhHHHH-HhhCCCCCHHHHHHHH
Confidence 2222322222 01122222333 45668999999999998874 3444555566666555
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
+++ +...|..+|+|||+||.|+|++.. ++|+|.||||+..
T Consensus 120 QIi~gv~yCH~~~icHRDLKpENlLLd~~--~nIKIADFGMAsL 161 (786)
T KOG0588|consen 120 QILDGVSYCHAFNICHRDLKPENLLLDVK--NNIKIADFGMASL 161 (786)
T ss_pred HHHHHHHHHhhhcceeccCCchhhhhhcc--cCEeeeccceeec
Confidence 554 667788999999999999999954 6699999999874
No 240
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.27 E-value=1e-11 Score=128.98 Aligned_cols=136 Identities=19% Similarity=0.163 Sum_probs=91.5
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
++||+|++|.||+|+.+ +|+.||||..+....... ...+.+|.
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~------------------------------------~~~~~~E~ 54 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA------------------------------------PFTAIREA 54 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC------------------------------------chhHHHHH
Confidence 58999999999999976 789999998764321100 00123355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++.+ + .|++++. ....++||||++| +|.++.......++...+...+.+++
T Consensus 55 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~ 113 (291)
T cd07844 55 SLLKDLKH------------------A--NIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLL 113 (291)
T ss_pred HHHhhCCC------------------c--ceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 55555432 1 2333332 3456899999987 66554322222345555555444444
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|++|.||+++ .++.++|+|||++...
T Consensus 114 ~al~~lH~~~i~H~dl~p~nil~~--~~~~~kl~dfg~~~~~ 153 (291)
T cd07844 114 RGLAYCHQRRVLHRDLKPQNLLIS--ERGELKLADFGLARAK 153 (291)
T ss_pred HHHHHHHhCCeecccCCHHHEEEc--CCCCEEECcccccccc
Confidence 7788999999999999999998 4589999999998654
No 241
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.27 E-value=2.6e-11 Score=123.27 Aligned_cols=138 Identities=18% Similarity=0.186 Sum_probs=92.9
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.+|+|++|.||+|.. .|+.||||..+.... .. -.+.+|..
T Consensus 12 ~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~-------------------------------------~~~~~e~~ 52 (256)
T cd05039 12 ATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AA-------------------------------------QAFLAEAS 52 (256)
T ss_pred eeeecCCCceEEEEEe-cCcEEEEEEeccchh-HH-------------------------------------HHHHHHHH
Confidence 5799999999999987 589999998754322 00 01233444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcce-eeeeeee-cCCCeeEeeecCCccCCChhhHHHc-CCCHHHHHHHHHHHH--
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY-- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~~~~~l~~~~-- 278 (666)
.+.++.+ +++ .+...+. .+..++||||++|.+|.+....... .++...+...+.++.
T Consensus 53 ~l~~l~~------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~ 114 (256)
T cd05039 53 VMTTLRH------------------PNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEG 114 (256)
T ss_pred HHHhcCC------------------cceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 4444322 111 1112222 5667899999999999876432211 244444444444443
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|+||+||+++ .++.++|+|||.+.....
T Consensus 115 l~~lh~~~i~H~di~p~Nili~--~~~~~~l~d~g~~~~~~~ 154 (256)
T cd05039 115 MEYLEEKNFVHRDLAARNVLVS--EDLVAKVSDFGLAKEASQ 154 (256)
T ss_pred HHHHHhCCccchhcccceEEEe--CCCCEEEccccccccccc
Confidence 6788999999999999999998 458999999999987643
No 242
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.27 E-value=1.7e-11 Score=126.41 Aligned_cols=140 Identities=16% Similarity=0.127 Sum_probs=91.5
Q ss_pred cccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHHH
Q 005995 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (666)
Q Consensus 126 i~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 204 (666)
||+|++|.||+|... +|+.||+|+.......... .+..+..|.+.
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~----------------------------------~~~~~~~e~~~ 46 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRK----------------------------------GEQMALNEKKI 46 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhh----------------------------------hhHHHHHHHHH
Confidence 689999999999864 7999999987543211000 11123345555
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-cCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHHH--H
Q 005995 205 TRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--A 279 (666)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~~--l 279 (666)
+.++++ +. +.+...+. ....++||||++|.+|.+...... ..++...+...+.+++ +
T Consensus 47 l~~l~~------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l 108 (277)
T cd05577 47 LEKVSS------------------RFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGL 108 (277)
T ss_pred HHhCCC------------------CCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHH
Confidence 555432 11 11222222 355689999999999887643221 1344444444444433 6
Q ss_pred HHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 280 ~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
..+|..|++|+|++|.||+++ .++.++|+|||.+..+.
T Consensus 109 ~~lH~~~i~H~di~p~Nil~~--~~~~~~l~dfg~~~~~~ 146 (277)
T cd05577 109 EHLHQRRIVYRDLKPENVLLD--DHGNVRISDLGLAVELK 146 (277)
T ss_pred HHHHhCCcccCCCCHHHEEEC--CCCCEEEccCcchhhhc
Confidence 788999999999999999998 45899999999887653
No 243
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.27 E-value=1.6e-11 Score=126.86 Aligned_cols=137 Identities=18% Similarity=0.182 Sum_probs=92.4
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||.|++|+||+|+.. +|+.||||+.+....... .-.+.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~------------------------------------~~~~~~E~ 49 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGT------------------------------------PSTAIREI 49 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEecccccccc------------------------------------hHHHHHHH
Confidence 57999999999999976 799999998764321100 00123355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH--cCCCHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITR 276 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~--~~~~~~~~~~~l~~ 276 (666)
..+.++.+ ..+++++. ....+|||||++| ++.+...... ..++...+...+.+
T Consensus 50 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~q 108 (284)
T cd07836 50 SLMKELKH--------------------ENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQ 108 (284)
T ss_pred HHHHhhcC--------------------CCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHH
Confidence 55555532 23444443 4566999999997 5554432111 22455555555544
Q ss_pred HH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 277 ~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
++ +..+|..|++|+|++|.||+++ +++.++|+|||++..+.
T Consensus 109 i~~~l~~lH~~~i~h~dl~p~ni~~~--~~~~~~l~d~g~~~~~~ 151 (284)
T cd07836 109 LLKGIAFCHENRVLHRDLKPQNLLIN--KRGELKLADFGLARAFG 151 (284)
T ss_pred HHHHHHHHHHCCeeeCCCCHHHEEEC--CCCcEEEeecchhhhhc
Confidence 44 6788999999999999999998 45899999999987553
No 244
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.27 E-value=1.4e-11 Score=127.53 Aligned_cols=141 Identities=18% Similarity=0.195 Sum_probs=89.0
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||.|++|.||+|+.+ +|+.||||+.+...... . ...++.+|.
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~--------------------~---------------~~~~~~~e~ 50 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED--------------------G---------------LPLSTVREV 50 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC--------------------C---------------CchHHHHHH
Confidence 46899999999999976 78999999876432110 0 000122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---------cCCCeeEeeecCCccCCChhhH-HHcCCCHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESL-EAFGVNKQKVVE 272 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---------~~~~vLvmE~i~G~~L~~~~~~-~~~~~~~~~~~~ 272 (666)
..+.++++. ++ ..+.+++. ....+++|||++| ++.++... ...+++...+..
T Consensus 51 ~~l~~l~~~---------------~h--~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~ 112 (288)
T cd07863 51 ALLKRLEAF---------------DH--PNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKD 112 (288)
T ss_pred HHHHHhhhc---------------CC--CCeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHH
Confidence 334443321 11 12233321 1234799999987 44443221 112345555555
Q ss_pred HHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 273 ~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.+.+++ +..+|..|++|+|+||+||+++ .++.++|+|||++..++
T Consensus 113 ~~~qi~~al~~lH~~~ivH~dikp~Nili~--~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 113 LMRQFLRGLDFLHANCIVHRDLKPENILVT--SGGQVKLADFGLARIYS 159 (288)
T ss_pred HHHHHHHHHHHHHhCCeecCCCCHHHEEEC--CCCCEEECccCcccccc
Confidence 555544 7788999999999999999998 45899999999987654
No 245
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.27 E-value=2.6e-11 Score=123.43 Aligned_cols=138 Identities=17% Similarity=0.168 Sum_probs=92.7
Q ss_pred ccccceeeeeEEEEec--C--CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHH
Q 005995 125 PLATASIAQVHRATLV--D--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~--~--g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 200 (666)
-||.|++|+||+|+.. + +..||+|+.+...... .+-++.+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~------------------------------------~~~~~~~ 45 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAA------------------------------------GKKEFLR 45 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchH------------------------------------HHHHHHH
Confidence 4899999999999854 2 3689999876543210 0111334
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
|...+.++.+ ++ +.+...+.....+++|||++|++|.+..... ...+...+...+.+++
T Consensus 46 e~~~l~~l~h------------------~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~ 106 (257)
T cd05060 46 EASVMAQLDH------------------PCIVRLIGVCKGEPLMLVMELAPLGPLLKYLKKR-REIPVSDLKELAHQVAM 106 (257)
T ss_pred HHHHHHhcCC------------------CCeeeEEEEEcCCceEEEEEeCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHH
Confidence 4444444322 11 2222222245678999999999988764322 2355555555555544
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|++|.||+++ .++.++|+|||++..+.
T Consensus 107 ~l~~lh~~~i~H~di~p~nili~--~~~~~kl~df~~~~~~~ 146 (257)
T cd05060 107 GMAYLESKHFVHRDLAARNVLLV--NRHQAKISDFGMSRALG 146 (257)
T ss_pred HHHHHhhcCeeccCcccceEEEc--CCCcEEeccccccceee
Confidence 6788999999999999999998 45899999999988764
No 246
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.26 E-value=2.4e-11 Score=137.36 Aligned_cols=79 Identities=18% Similarity=0.268 Sum_probs=53.9
Q ss_pred CCCeeEeeecCCccCCChhhHHHcCCC-------------------HHHHHHHHHHHH--HHHhhhcCccccCCCcCceE
Q 005995 240 SETVLILEFMDGIRLNDCESLEAFGVN-------------------KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFL 298 (666)
Q Consensus 240 ~~~vLvmE~i~G~~L~~~~~~~~~~~~-------------------~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNil 298 (666)
...+|||||+++.+|.++......... ...+...+.++. +.++|..|++|||+||.|||
T Consensus 208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NIL 287 (566)
T PLN03225 208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNII 287 (566)
T ss_pred CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEE
Confidence 456899999999998776431110000 011112222222 77889999999999999999
Q ss_pred EeeCCCCceEEEecccccccC
Q 005995 299 VSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 299 v~~~~~~~i~liDFG~~~~l~ 319 (666)
++.+ ++.++|+|||+++.+.
T Consensus 288 l~~~-~~~~KL~DFGlA~~l~ 307 (566)
T PLN03225 288 FSEG-SGSFKIIDLGAAADLR 307 (566)
T ss_pred EeCC-CCcEEEEeCCCccccc
Confidence 9843 4789999999997653
No 247
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.26 E-value=2.1e-11 Score=127.99 Aligned_cols=139 Identities=19% Similarity=0.150 Sum_probs=92.1
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|... +|+.||+|+.+.+...... .++.+|.
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------------~~~~~E~ 50 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIR------------------------------------NQIIREL 50 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHH------------------------------------HHHHHHH
Confidence 46999999999999865 7889999987654321110 0133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
+.+.++.+ ++ +.+...+. ....++||||++|++|.++.... ..++...+...+.+++
T Consensus 51 ~~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~ 111 (308)
T cd06615 51 KVLHECNS------------------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRG 111 (308)
T ss_pred HHHHhCCC------------------CCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHH
Confidence 55555432 11 12222222 45668999999999998774322 2334444333333333
Q ss_pred HHHhhh-cCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 l~~i~~-~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|. .|++|+|++|.||+++ +++.++|+|||++..+.
T Consensus 112 l~~lH~~~~i~H~dl~p~nil~~--~~~~~~l~dfg~~~~~~ 151 (308)
T cd06615 112 LTYLREKHKIMHRDVKPSNILVN--SRGEIKLCDFGVSGQLI 151 (308)
T ss_pred HHHHHhhCCEEECCCChHHEEEe--cCCcEEEccCCCccccc
Confidence 667786 6999999999999998 45889999999987653
No 248
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.26 E-value=2.4e-11 Score=127.34 Aligned_cols=139 Identities=19% Similarity=0.208 Sum_probs=92.6
Q ss_pred cccccceeeeeEEEEec--------CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhh
Q 005995 124 TPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~--------~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~E 195 (666)
+.||+|++|.||+|+.. ++..||+|+.++.....-.
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~------------------------------------ 67 (307)
T cd05098 24 KPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDL------------------------------------ 67 (307)
T ss_pred eeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHH------------------------------------
Confidence 58999999999999752 2357999998765321100
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH---------
Q 005995 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA--------- 262 (666)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~--------- 262 (666)
-++..|...+.++.+ + ..+++++. ....++||||++|++|.++.....
T Consensus 68 ~~~~~e~~~l~~l~~-----------------h--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~ 128 (307)
T cd05098 68 SDLISEMEMMKMIGK-----------------H--KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYN 128 (307)
T ss_pred HHHHHHHHHHHHhcC-----------------C--CCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccc
Confidence 013334444444421 1 22333332 456789999999999887743211
Q ss_pred ------cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 263 ------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 263 ------~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
..++...+...+.++. +..+|..|++|+|+||.||+++ +++.++|+|||.+..+.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~--~~~~~kL~dfg~a~~~~ 191 (307)
T cd05098 129 PTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT--EDNVMKIADFGLARDIH 191 (307)
T ss_pred cccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEc--CCCcEEECCCccccccc
Confidence 1234444445455443 7888999999999999999998 45899999999987664
No 249
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.26 E-value=2.7e-11 Score=126.42 Aligned_cols=137 Identities=18% Similarity=0.174 Sum_probs=89.5
Q ss_pred cccccceeeeeEEEEec-CCC--EEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHH
Q 005995 124 TPLATASIAQVHRATLV-DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~--~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 200 (666)
+.||.|++|+||+|+.. +|. .|++|+.+........ -++.+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~ 51 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDH------------------------------------RDFAG 51 (297)
T ss_pred eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHH------------------------------------HHHHH
Confidence 57999999999999975 444 4788876532211100 12445
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH--------------
Q 005995 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-------------- 262 (666)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~-------------- 262 (666)
|...+.++.+ + ..+.+++. .+..+++|||+++++|.++.....
T Consensus 52 E~~~l~~l~~-----------------h--p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 112 (297)
T cd05089 52 ELEVLCKLGH-----------------H--PNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGT 112 (297)
T ss_pred HHHHHHhhcC-----------------C--CchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCc
Confidence 6556555522 1 12333332 355689999999999877643211
Q ss_pred -cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 263 -FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 263 -~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
..+....+...+.++. +..+|..|++|+|+||.||+++ .++.++|+|||++..
T Consensus 113 ~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~--~~~~~kl~dfg~~~~ 168 (297)
T cd05089 113 ASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG--ENLASKIADFGLSRG 168 (297)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC--CCCeEEECCcCCCcc
Confidence 1133344444444443 7889999999999999999998 457899999999764
No 250
>PHA02988 hypothetical protein; Provisional
Probab=99.26 E-value=2.2e-11 Score=126.31 Aligned_cols=140 Identities=16% Similarity=0.172 Sum_probs=94.9
Q ss_pred CccccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 122 VETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 122 ~~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
+...+++|++|.||+|.. +|+.||||+.+...... ..+++ .|.+|
T Consensus 24 ~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~------------------------~~~~~----------~~~~E 68 (283)
T PHA02988 24 TSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGH------------------------KVLID----------ITENE 68 (283)
T ss_pred CCeEEeeCCceEEEEEEE-CCEEEEEEecccccccc------------------------HHHHH----------HHHHH
Confidence 346799999999999997 79999999876431100 00010 14557
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--------cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~ 273 (666)
+..+.++++ + .|.+++. ....++||||++|++|.++.... ..++.......
T Consensus 69 ~~~l~~l~h------------------~--nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i 127 (283)
T PHA02988 69 IKNLRRIDS------------------N--NILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDM 127 (283)
T ss_pred HHHHHhcCC------------------C--CEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHH
Confidence 767666543 1 3344432 13458999999999998875322 23444444444
Q ss_pred HHHHH--HHHhhh-cCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 274 ITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 274 l~~~~--l~~i~~-~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+.++. +..+|. .|++|+|++|.||+++ .++.++|+|||++..++
T Consensus 128 ~~~i~~~l~~lH~~~~~~Hrdlkp~nill~--~~~~~kl~dfg~~~~~~ 174 (283)
T PHA02988 128 AIDCCKGLYNLYKYTNKPYKNLTSVSFLVT--ENYKLKIICHGLEKILS 174 (283)
T ss_pred HHHHHHHHHHHHhcCCCCCCcCChhhEEEC--CCCcEEEcccchHhhhc
Confidence 44433 677887 5999999999999998 45899999999987654
No 251
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.26 E-value=2.2e-11 Score=124.13 Aligned_cols=138 Identities=15% Similarity=0.172 Sum_probs=95.1
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+++|+|++|.||+|... +++.+++|+......... . .+.+|.
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~----~---------------------------------~~~~e~ 51 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDF----E---------------------------------IIQQEI 51 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhH----H---------------------------------HHHHHH
Confidence 57999999999999975 688999998764322110 0 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++.+ ..+.+++ . ....+++|||++|.+|.++.......++...+...+.+++
T Consensus 52 ~~l~~~~h--------------------~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~ 111 (262)
T cd06613 52 SMLKECRH--------------------PNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETL 111 (262)
T ss_pred HHHHhCCC--------------------CChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHH
Confidence 44444322 1222222 2 4456899999999999887543334566655555554444
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|++|.||+++ .++.++|+|||++..+..
T Consensus 112 ~~l~~lh~~~i~h~dl~p~ni~i~--~~~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 112 KGLAYLHETGKIHRDIKGANILLT--EDGDVKLADFGVSAQLTA 153 (262)
T ss_pred HHHHHHHhCCceecCCChhhEEEC--CCCCEEECccccchhhhh
Confidence 6788999999999999999999 458899999999876643
No 252
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.26 E-value=1.2e-11 Score=127.89 Aligned_cols=138 Identities=16% Similarity=0.098 Sum_probs=89.9
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+.+......- ..-.+.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-----------------------------------~~~~~~~e~ 50 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEG-----------------------------------VPSTAIREI 50 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccCC-----------------------------------chHHHHHHH
Confidence 46999999999999975 799999998754211100 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH--cCCCHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITR 276 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~--~~~~~~~~~~~l~~ 276 (666)
..+.++.+ ..+++++. ....++||||++| ++.+...... ..++...+...+.+
T Consensus 51 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~q 109 (285)
T cd07861 51 SLLKELQH--------------------PNIVCLQDVLMQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQ 109 (285)
T ss_pred HHHHhcCC--------------------CCEeeeEEEEeeCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 44444422 22333332 4566899999986 4544322111 23455555444444
Q ss_pred HH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 277 ~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
++ +..+|..|++|+|+||.||+++ .++.++|+|||++..+.
T Consensus 110 i~~~L~~lH~~~i~H~dl~p~nil~~--~~~~~~l~dfg~~~~~~ 152 (285)
T cd07861 110 ILQGILFCHSRRVLHRDLKPQNLLID--NKGVIKLADFGLARAFG 152 (285)
T ss_pred HHHHHHHHHhCCeeecCCCHHHEEEc--CCCcEEECcccceeecC
Confidence 44 7788999999999999999998 45899999999987653
No 253
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.26 E-value=1.1e-11 Score=133.88 Aligned_cols=75 Identities=21% Similarity=0.302 Sum_probs=53.2
Q ss_pred CCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 241 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
..++||||+++ +|.+... ....++...+...+.++. +..+|..|++|+|+||.|||++ .++.++|+|||++...
T Consensus 78 ~~~lv~e~~~~-~l~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~--~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 78 EIYVVTELMQS-DLHKIIV-SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN--SNCVLKICDFGLARVE 153 (372)
T ss_pred eEEEEeecccc-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEEC--CCCCEEeccccceeec
Confidence 45899999976 3333211 122344444444444433 7889999999999999999998 4589999999998764
Q ss_pred C
Q 005995 319 S 319 (666)
Q Consensus 319 ~ 319 (666)
.
T Consensus 154 ~ 154 (372)
T cd07853 154 E 154 (372)
T ss_pred c
Confidence 3
No 254
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.26 E-value=3.2e-11 Score=123.40 Aligned_cols=145 Identities=16% Similarity=0.134 Sum_probs=94.0
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
..||+|++|+||+|... +++.||||+...........+ ...++.+ .+.+|.
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~----------------------~~~~~~~------~~~~e~ 57 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKD----------------------RKRSMLD------ALAREI 57 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhH----------------------HHHHHHH------HHHHHH
Confidence 57899999999999865 689999998754321110000 0000111 244455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++.+ ..+++++. ....+++|||++|.+|.++.... ..++...+...+.+++
T Consensus 58 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~ 116 (267)
T cd06628 58 ALLKELQH--------------------ENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQIL 116 (267)
T ss_pred HHHHhcCC--------------------CCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHH
Confidence 55555432 22333332 45678999999999887764321 2234333333333333
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|++|.||+++ +++.++|+|||++..+.
T Consensus 117 ~~l~~lH~~~ivH~di~p~nil~~--~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 117 KGLNYLHNRGIIHRDIKGANILVD--NKGGIKISDFGISKKLE 157 (267)
T ss_pred HHHHHHHhcCcccccCCHHHEEEc--CCCCEEecccCCCcccc
Confidence 6788999999999999999998 46899999999988775
No 255
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.26 E-value=3.8e-11 Score=123.35 Aligned_cols=136 Identities=18% Similarity=0.168 Sum_probs=88.9
Q ss_pred ccccceeeeeEEEEec-CCC--EEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 125 PLATASIAQVHRATLV-DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~-~g~--~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
.||+|++|.||+|++. +|. .|++|..+........ -++.+|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~------------------------------------~~~~~E 45 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH------------------------------------RDFAGE 45 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHH------------------------------------HHHHHH
Confidence 5899999999999975 454 4688876543221110 124445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH---------------
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA--------------- 262 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~--------------- 262 (666)
...+.++.+ ++ .|.+++. .+..++||||++|++|.+......
T Consensus 46 ~~~l~~l~~-----------------h~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~ 106 (270)
T cd05047 46 LEVLCKLGH-----------------HP--NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 106 (270)
T ss_pred HHHHHhhcc-----------------CC--CeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCc
Confidence 555555532 11 2333332 455789999999999877643211
Q ss_pred cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 263 FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 263 ~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
..+....+...+.++. +..+|..|++|+|++|.||+++ .++.++|+|||++..
T Consensus 107 ~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~--~~~~~kl~dfgl~~~ 161 (270)
T cd05047 107 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG--ENYVAKIADFGLSRG 161 (270)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEc--CCCeEEECCCCCccc
Confidence 0123344444444433 6788999999999999999998 458899999998753
No 256
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.26 E-value=2.2e-11 Score=124.64 Aligned_cols=141 Identities=17% Similarity=0.159 Sum_probs=92.8
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||.|++|.||+|+.. +|+.||||..++-..... ..+.++.+|.
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~----------------------------------~~~~~~~~e~ 53 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDA----------------------------------KARQDCVKEI 53 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCH----------------------------------HHHHHHHHHH
Confidence 56999999999999965 899999997643110000 0111244455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHH---HcCCCHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEIT 275 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~~~~~l~ 275 (666)
+.+.++.+ ..+++++. ....+++|||++|++|.++.... ...++...+...+.
T Consensus 54 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 113 (267)
T cd08228 54 DLLKQLNH--------------------PNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFV 113 (267)
T ss_pred HHHHhCCC--------------------cceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHH
Confidence 54444422 22333332 35568999999999887764321 11234444444333
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
++. +..+|..|++|+|++|.||+++. ++.+.|+|||++..+..
T Consensus 114 ~i~~~l~~LH~~~i~H~dl~~~nil~~~--~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 114 QLCSAVEHMHSRRVMHRDIKPANVFITA--TGVVKLGDLGLGRFFSS 158 (267)
T ss_pred HHHHHHHHHhhCCeeCCCCCHHHEEEcC--CCCEEECccccceeccc
Confidence 333 67789999999999999999984 58899999999887654
No 257
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.26 E-value=1.9e-11 Score=127.57 Aligned_cols=78 Identities=21% Similarity=0.332 Sum_probs=59.1
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
....+++|||++|.+|.+.. ....++...+...+.++. +..+|..|++|+|++|+||+++ .++.++|+|||++.
T Consensus 90 ~~~~~iv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~--~~~~~kL~dfg~~~ 165 (297)
T cd06659 90 GEELWVLMEFLQGGALTDIV--SQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLT--LDGRVKLSDFGFCA 165 (297)
T ss_pred CCeEEEEEecCCCCCHHHHH--hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEc--cCCcEEEeechhHh
Confidence 35568999999999887653 233455555554444443 6788999999999999999998 45899999999987
Q ss_pred ccCH
Q 005995 317 KLSS 320 (666)
Q Consensus 317 ~l~~ 320 (666)
.+..
T Consensus 166 ~~~~ 169 (297)
T cd06659 166 QISK 169 (297)
T ss_pred hccc
Confidence 6543
No 258
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.26 E-value=1.7e-11 Score=124.90 Aligned_cols=76 Identities=21% Similarity=0.268 Sum_probs=57.4
Q ss_pred CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 240 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
...+++|||++|.+|.++..-. ..++...+...+.+++ +..+|..|++|+|++|.||+++ +++.++|+|||++..
T Consensus 66 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~--~~~~~~l~dfg~~~~ 142 (265)
T cd05579 66 KNLYLVMEYLPGGDLASLLENV-GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILID--SNGHLKLTDFGLSKV 142 (265)
T ss_pred cEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEc--CCCCEEEEecccchh
Confidence 4458999999999987764321 2345555444444443 6788999999999999999998 458999999998765
Q ss_pred c
Q 005995 318 L 318 (666)
Q Consensus 318 l 318 (666)
.
T Consensus 143 ~ 143 (265)
T cd05579 143 G 143 (265)
T ss_pred c
Confidence 4
No 259
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.26 E-value=1.2e-11 Score=128.92 Aligned_cols=77 Identities=21% Similarity=0.339 Sum_probs=59.1
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
....++||||++|.+|.++. ....++...+...+.+++ +..+|..|++|+|++|.||+++ .++.++|+|||++.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~--~~~~~kL~dfg~~~ 166 (292)
T cd06658 91 GDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT--SDGRIKLSDFGFCA 166 (292)
T ss_pred CCeEEEEEeCCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc--CCCCEEEccCcchh
Confidence 34568999999999887763 233445555555555544 7888999999999999999998 45899999999986
Q ss_pred ccC
Q 005995 317 KLS 319 (666)
Q Consensus 317 ~l~ 319 (666)
.+.
T Consensus 167 ~~~ 169 (292)
T cd06658 167 QVS 169 (292)
T ss_pred hcc
Confidence 553
No 260
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.26 E-value=2.3e-11 Score=126.26 Aligned_cols=142 Identities=18% Similarity=0.192 Sum_probs=92.7
Q ss_pred cccccceeeeeEEEEec----CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHH
Q 005995 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~----~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 199 (666)
+.||+|++|.||+|+.. +|+.||+|+.+......-. . ..-.+.
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~---------------------------~------~~~~~~ 52 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKA---------------------------K------TTEHTR 52 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcc---------------------------h------HHHHHH
Confidence 46899999999999863 7899999987542110000 0 000122
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHH
Q 005995 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (666)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~ 275 (666)
+|.+.+.++.+ ...|+.++. ....++||||++|++|.+.... ...+....+...+.
T Consensus 53 ~e~~~l~~l~~-------------------~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~ 112 (290)
T cd05613 53 TERQVLEHIRQ-------------------SPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQ-RERFKEQEVQIYSG 112 (290)
T ss_pred HHHHHHHhccc-------------------CCChhceeeEeecCCeEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHH
Confidence 34444444432 122333332 3445799999999988776432 22345555544443
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
++. +..+|..|++|+|++|.||+++ .+++++|+|||++..+..
T Consensus 113 qi~~al~~lH~~~i~H~dl~p~nil~~--~~~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 113 EIVLALEHLHKLGIIYRDIKLENILLD--SNGHVVLTDFGLSKEFHE 157 (290)
T ss_pred HHHHHHHHHHhCCeeccCCCHHHeEEC--CCCCEEEeeCccceeccc
Confidence 433 7889999999999999999998 458999999999887654
No 261
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.26 E-value=1.9e-11 Score=124.95 Aligned_cols=137 Identities=20% Similarity=0.266 Sum_probs=96.3
Q ss_pred cccccceeeeeEEEEec-----CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 124 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-----~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
+-||+|++|.||+|+++ .+..|+||+..+...... .-+|
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~------------------------------------~~~~ 48 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEE------------------------------------EEEF 48 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHH------------------------------------HHHH
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccccc------------------------------------ceee
Confidence 35899999999999986 357899999876432211 1124
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHH
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEE 273 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~ 273 (666)
.+|++.+.++++ ..|.+++. .....+||||+++++|.+..... ...++.......
T Consensus 49 ~~e~~~l~~l~h--------------------~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i 108 (259)
T PF07714_consen 49 LNEIQILRKLRH--------------------PNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSI 108 (259)
T ss_dssp HHHHHHHHTHSB--------------------TTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHH
T ss_pred eecccccccccc--------------------cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 456666666532 22344443 34568999999999998875433 235666666666
Q ss_pred HHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 274 l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+.++. +..+|..+++|+|++|.||+++ .++.++|.|||+....
T Consensus 109 ~~~i~~~l~~Lh~~~iiH~~l~~~nill~--~~~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 109 AIQIAEALSYLHSNNIIHGNLSPSNILLD--SNGQVKLSDFGLSRPI 153 (259)
T ss_dssp HHHHHHHHHHHHHTTEEEST-SGGGEEEE--TTTEEEEESTTTGEET
T ss_pred ccccccccccccccccccccccccccccc--cccccccccccccccc
Confidence 66655 7789999999999999999999 4589999999999876
No 262
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.25 E-value=1.6e-12 Score=124.45 Aligned_cols=156 Identities=20% Similarity=0.226 Sum_probs=98.0
Q ss_pred ccC-ccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 120 DFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 120 ~~~-~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
+|+ .+|+|.|.||+||.|+.+ ++--||+||.... ++. ..+...++.+|+.
T Consensus 23 dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKs---qi~-------------------------~~~v~~qlrREiE 74 (281)
T KOG0580|consen 23 DFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKS---QIL-------------------------KTQVEHQLRREIE 74 (281)
T ss_pred hccccccccCCccccEeEeeeccCCcEEEEeeeeHH---HHH-------------------------HhcchhhhhheeE
Confidence 455 479999999999999965 7889999997421 000 0111222223332
Q ss_pred HHHHH--HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHc-CCCHH---HHH
Q 005995 198 FNSEA--ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAF-GVNKQ---KVV 271 (666)
Q Consensus 198 ~~~Ea--~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~---~~~ 271 (666)
...-. .|+-++...|- .+.+-+|++||..++.+.....-... .++.. ...
T Consensus 75 Iqs~L~hpnilrlY~~fh------------------------d~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi 130 (281)
T KOG0580|consen 75 IQSHLRHPNILRLYGYFH------------------------DSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYI 130 (281)
T ss_pred eecccCCccHHhhhhhee------------------------ccceeEEEEEecCCchHHHHHHhcccccccccchhHHH
Confidence 21111 13333333221 14556899999988877654321121 23332 233
Q ss_pred HHHHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHHHHHHH
Q 005995 272 EEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMF 330 (666)
Q Consensus 272 ~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~~~l~ 330 (666)
..++.+ +...|..+++|||+||.|+|++ .+|.+++.|||-+..-+...|..+|.-+
T Consensus 131 ~q~A~A-l~y~h~k~VIhRdiKpenlLlg--~~~~lkiAdfGwsV~~p~~kR~tlcgt~ 186 (281)
T KOG0580|consen 131 KQLANA-LLYCHLKRVIHRDIKPENLLLG--SAGELKIADFGWSVHAPSNKRKTLCGTL 186 (281)
T ss_pred HHHHHH-HHHhccCCcccCCCCHHHhccC--CCCCeeccCCCceeecCCCCceeeeccc
Confidence 334443 5567889999999999999999 4589999999998877777777776543
No 263
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.25 E-value=2e-11 Score=125.31 Aligned_cols=77 Identities=16% Similarity=0.195 Sum_probs=57.3
Q ss_pred CeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 242 TVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 242 ~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
.+++|||++|.+|.+...... ..+....+...+.+++ +..+|..|++|+|+||+||+++. ++.++|+|||++..+
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~--~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 84 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE--NAEVKLVDFGVSAQL 161 (272)
T ss_pred EEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECC--CCCEEEccCCCceec
Confidence 479999999999887643221 2234444444444433 67899999999999999999984 578999999998766
Q ss_pred CH
Q 005995 319 SS 320 (666)
Q Consensus 319 ~~ 320 (666)
..
T Consensus 162 ~~ 163 (272)
T cd06637 162 DR 163 (272)
T ss_pred cc
Confidence 43
No 264
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.25 E-value=1.8e-11 Score=127.74 Aligned_cols=136 Identities=15% Similarity=0.168 Sum_probs=92.4
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.+|+|++|.||+|+.. +|+.|+||.......... -.+.+|.
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~-------------------------------------~~~~~e~ 68 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-------------------------------------ELIINEI 68 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchH-------------------------------------HHHHHHH
Confidence 45999999999999864 789999997643221100 0133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+..+.+ + .+.+++ . ....++||||++|.+|.++. .....+...+...+.++.
T Consensus 69 ~~l~~~~h------------------~--~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~i~~ql~ 126 (296)
T cd06654 69 LVMRENKN------------------P--NIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECL 126 (296)
T ss_pred HHHHhCCC------------------C--CEeeEEEEEEeCCEEEEeecccCCCCHHHHH--HhcCCCHHHHHHHHHHHH
Confidence 44433321 2 222332 2 45678999999999998764 233345555555444443
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|++|.||+++. ++.++|+|||++.....
T Consensus 127 ~aL~~LH~~gi~H~dLkp~Nill~~--~~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 127 QALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFCAQITP 168 (296)
T ss_pred HHHHHHHHCCcccCCCCHHHEEEcC--CCCEEECccccchhccc
Confidence 67889999999999999999984 58899999999876543
No 265
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.25 E-value=1.6e-11 Score=126.90 Aligned_cols=141 Identities=19% Similarity=0.232 Sum_probs=93.4
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
..||+|++|+||+|+.+ +|+.||+|+......... .+-.+.+|.
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-----------------------------------~~~~~~~e~ 51 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPV-----------------------------------IKKIALREI 51 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCcc-----------------------------------ccHHHHHHH
Confidence 45899999999999986 699999998643211000 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
..+.++.+ ++ +.+...+. ....++||||++|..+..+.. ....++...+...+.+++
T Consensus 52 ~~l~~~~h------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~ql~~~ 112 (286)
T cd07847 52 RMLKQLKH------------------PNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEK-NPRGVPEHLIKKIIWQTLQA 112 (286)
T ss_pred HHHHhCCC------------------CCEeeeeeEEeeCCEEEEEEeccCccHHHHHHh-CCCCCCHHHHHHHHHHHHHH
Confidence 44444322 11 22222222 445689999999987765532 122355555555555544
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|+||.||+++ .++.++|+|||++..+..
T Consensus 113 l~~LH~~~i~H~dl~p~nil~~--~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 113 VNFCHKHNCIHRDVKPENILIT--KQGQIKLCDFGFARILTG 152 (286)
T ss_pred HHHHHHCCceecCCChhhEEEc--CCCcEEECccccceecCC
Confidence 7788999999999999999998 458999999999987754
No 266
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.25 E-value=2.1e-11 Score=127.69 Aligned_cols=139 Identities=18% Similarity=0.207 Sum_probs=91.1
Q ss_pred cccccceeeeeEEEEec-CCC----EEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 124 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~----~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
+.||+|++|+||+|+.. +|+ .||+|+..+....... ..+
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~ 56 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN------------------------------------VEF 56 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHH------------------------------------HHH
Confidence 57999999999999864 555 5788977654321110 013
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHH
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~ 275 (666)
.+|...+.++.+ + .+.+.+. .....++|||++++++.+........++...+...+.
T Consensus 57 ~~e~~~~~~l~h------------------~--niv~~~~~~~~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 116 (303)
T cd05110 57 MDEALIMASMDH------------------P--HLVRLLGVCLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCV 116 (303)
T ss_pred HHHHHHHHhCCC------------------C--CcccEEEEEcCCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHH
Confidence 345544444322 1 1222222 3456799999999888776432222344444444444
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
++. +..+|..|++|+|+||.||+++ .++.++|+|||++..+..
T Consensus 117 qi~~~L~~LH~~~ivH~dikp~Nill~--~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 117 QIAKGMMYLEERRLVHRDLAARNVLVK--SPNHVKITDFGLARLLEG 161 (303)
T ss_pred HHHHHHHHHhhcCeeccccccceeeec--CCCceEEccccccccccC
Confidence 433 6788999999999999999998 357899999999987653
No 267
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.25 E-value=1.9e-11 Score=124.21 Aligned_cols=142 Identities=18% Similarity=0.149 Sum_probs=91.9
Q ss_pred ccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
.+.||+|++|+||+|+.. +|+.|++|+....-...... +..+ .+.+|
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~--------------------------~~~~------~~~~e 52 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQ--------------------------EAVK------QLEQE 52 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccch--------------------------HHHH------HHHHH
Confidence 367999999999999986 89999999875422110000 0000 12233
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcC-CCHHHHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITR 276 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~~~~~l~~ 276 (666)
..-+.++.+ ..+++++. ....+++|||++|.+|.++.. ..+ .+...+...+.+
T Consensus 53 ~~~l~~~~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~ 110 (258)
T cd06632 53 IALLSKLQH--------------------PNIVQYLGTEREEDNLYIFLELVPGGSLAKLLK--KYGSFPEPVIRLYTRQ 110 (258)
T ss_pred HHHHHhcCC--------------------CCchheeeeEecCCeEEEEEEecCCCcHHHHHH--hcCCCCHHHHHHHHHH
Confidence 333333322 12222221 345689999999999887643 222 444444333333
Q ss_pred HH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 277 ~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
++ +..+|..|++|+|++|+||+++ .++.++|+|||++..+..
T Consensus 111 i~~~l~~lH~~~i~H~dl~~~ni~~~--~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 111 ILLGLEYLHDRNTVHRDIKGANILVD--TNGVVKLADFGMAKQVVE 154 (258)
T ss_pred HHHHHHHHHHCCcccCCCCHHHEEEC--CCCCEEEccCccceeccc
Confidence 33 6788999999999999999998 458999999999887644
No 268
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.25 E-value=2.7e-11 Score=125.16 Aligned_cols=80 Identities=13% Similarity=0.088 Sum_probs=61.3
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
....+++|||++|++|.+........++...+...+.++. +..+|..|++|+|+||.||+++ .++.++|+|||+++
T Consensus 80 ~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~--~~~~~kl~Dfg~~~ 157 (279)
T cd05111 80 GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLK--SDSIVQIADFGVAD 157 (279)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc--CCCcEEEcCCccce
Confidence 4456799999999999887543333455555555554544 7788999999999999999998 45889999999998
Q ss_pred ccCH
Q 005995 317 KLSS 320 (666)
Q Consensus 317 ~l~~ 320 (666)
.+.+
T Consensus 158 ~~~~ 161 (279)
T cd05111 158 LLYP 161 (279)
T ss_pred eccC
Confidence 7643
No 269
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.25 E-value=2.9e-11 Score=122.86 Aligned_cols=141 Identities=16% Similarity=0.180 Sum_probs=92.1
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||.|++|+||++... +|+.||+|..+......... ++..|.
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~------------------------------------~~~~e~ 49 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVE------------------------------------DSRKEA 49 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHH------------------------------------HHHHHH
Confidence 57999999999999875 78999999864221110000 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-cCCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHHHHHHH-
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~l~~~~- 278 (666)
..+.++.+ ++ +.+...+. .+..+++|||++|+++.+..... ....+...+...+.++.
T Consensus 50 ~~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~ 111 (255)
T cd08219 50 VLLAKMKH------------------PNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCL 111 (255)
T ss_pred HHHHhCCC------------------CCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 33333322 12 12222222 45678999999999887654321 12244444444444443
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|++|.||+++ .++.++++|||.+..+..
T Consensus 112 al~~lH~~~i~H~dl~p~nili~--~~~~~~l~dfg~~~~~~~ 152 (255)
T cd08219 112 GVQHIHEKRVLHRDIKSKNIFLT--QNGKVKLGDFGSARLLTS 152 (255)
T ss_pred HHHHHhhCCcccCCCCcceEEEC--CCCcEEEcccCcceeecc
Confidence 7889999999999999999998 458899999999877644
No 270
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.25 E-value=2.1e-11 Score=124.71 Aligned_cols=139 Identities=17% Similarity=0.179 Sum_probs=91.6
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCC-ChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQ-GIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p-~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
+.||+|++|+||+|+.. +|+.||||.... +.... ...-++.+|
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~-----------------------------------~~~~~~~~e 52 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDA-----------------------------------KARADCIKE 52 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhH-----------------------------------HHHHHHHHH
Confidence 57999999999999964 899999996542 11000 001124445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHH---HcCCCHHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEI 274 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~~~~~l 274 (666)
.+.+..+.+ ..+++++. ....+++|||++|.+|.++.... ...++...+...+
T Consensus 53 ~~~l~~~~h--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 112 (267)
T cd08229 53 IDLLKQLNH--------------------PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYF 112 (267)
T ss_pred HHHHHHccC--------------------CchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHH
Confidence 444444322 12222221 34568999999999998764321 1123444444444
Q ss_pred HHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 275 ~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.+++ +..+|..|++|+|++|.||+++ .++.++|+|||++..+.
T Consensus 113 ~~i~~~l~~LH~~~i~H~dl~p~nili~--~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 113 VQLCSALEHMHSRRVMHRDIKPANVFIT--ATGVVKLGDLGLGRFFS 157 (267)
T ss_pred HHHHHHHHHHHHCCeecCCCCHHHEEEc--CCCCEEECcchhhhccc
Confidence 4443 6788999999999999999998 46899999999987654
No 271
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.25 E-value=3.1e-11 Score=123.75 Aligned_cols=76 Identities=20% Similarity=0.238 Sum_probs=56.9
Q ss_pred CeeEeeecCCccCCChhhHHH-----cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccc
Q 005995 242 TVLILEFMDGIRLNDCESLEA-----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 314 (666)
Q Consensus 242 ~vLvmE~i~G~~L~~~~~~~~-----~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~ 314 (666)
.+++|||++|++|........ ..++...+...+.++. +..+|..|++|+|+||.||++++ +++++|+|||+
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~ 159 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRE--DMTVCVADFGL 159 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECC--CCeEEECCccc
Confidence 589999999999876643222 1234444444444433 78889999999999999999984 58999999999
Q ss_pred ccccC
Q 005995 315 TKKLS 319 (666)
Q Consensus 315 ~~~l~ 319 (666)
++.+.
T Consensus 160 ~~~~~ 164 (273)
T cd05035 160 SKKIY 164 (273)
T ss_pred eeecc
Confidence 88664
No 272
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.25 E-value=3.4e-11 Score=124.15 Aligned_cols=140 Identities=18% Similarity=0.169 Sum_probs=93.4
Q ss_pred cccccceeeeeEEEEecC------CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 124 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~------g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
+.||.|++|.||+|...+ +..||+|......... .+.+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~------------------------------------~~~~ 55 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQ------------------------------------DESD 55 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHH------------------------------------HHHH
Confidence 579999999999999753 5678999765432211 1223
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHc------CCCH
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF------GVNK 267 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~------~~~~ 267 (666)
|.+|...+.++.+ ..+.+++. ....++||||++|++|.++...... .++.
T Consensus 56 ~~~e~~~l~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~ 115 (277)
T cd05036 56 FLMEALIMSKFNH--------------------QNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTM 115 (277)
T ss_pred HHHHHHHHHhCCC--------------------CCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCH
Confidence 4556555554432 12333332 4557899999999999876432211 2344
Q ss_pred HHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCC-CCceEEEecccccccC
Q 005995 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLS 319 (666)
Q Consensus 268 ~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~-~~~i~liDFG~~~~l~ 319 (666)
..+...+.++. +..+|..|++|+|+||+||+++.++ +..++|+|||++..+.
T Consensus 116 ~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~ 170 (277)
T cd05036 116 KDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIY 170 (277)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccC
Confidence 44444444444 6788999999999999999998532 2358999999998763
No 273
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.25 E-value=3.8e-11 Score=124.22 Aligned_cols=138 Identities=16% Similarity=0.198 Sum_probs=89.6
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||+|+.++.... . -++.+|.
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--~------------------------------------~~~~~e~ 65 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI--D------------------------------------EEIEAEY 65 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeeccccch--H------------------------------------HHHHHHH
Confidence 57999999999999875 7899999986542110 0 0122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---------cCCCeeEeeecCCccCCChhhHH---HcCCCHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLE---AFGVNKQKV 270 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---------~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~~ 270 (666)
..+.++.+ + ..+++++. ....++||||++|.+|.++.... ...++...+
T Consensus 66 ~~l~~l~~-----------------h--~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 126 (286)
T cd06638 66 NILKALSD-----------------H--PNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPII 126 (286)
T ss_pred HHHHHHhc-----------------C--CCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHH
Confidence 44444421 1 12333322 13358999999999998764311 112333333
Q ss_pred HHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 271 ~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
...+.++. +..+|..|++|+|+||+||+++. ++.++|+|||++..+..
T Consensus 127 ~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~--~~~~kl~dfg~~~~~~~ 176 (286)
T cd06638 127 AYILHEALMGLQHLHVNKTIHRDVKGNNILLTT--EGGVKLVDFGVSAQLTS 176 (286)
T ss_pred HHHHHHHHHHHHHHHhCCccccCCCHHhEEECC--CCCEEEccCCceeeccc
Confidence 33333322 67889999999999999999984 57899999999877643
No 274
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.25 E-value=3.5e-11 Score=122.60 Aligned_cols=138 Identities=18% Similarity=0.203 Sum_probs=97.3
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.|+||+.++....... -++.+|.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~------------------------------------~~~~~e~ 50 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFR------------------------------------KQLLREL 50 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHH------------------------------------HHHHHHH
Confidence 67999999999999976 6999999987664321100 1133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++++ ..+++++. ....+++|||++|.+|.+..... ..++...+...+.+++
T Consensus 51 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~ 109 (264)
T cd06623 51 KTLRSCES--------------------PYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQIL 109 (264)
T ss_pred HHHHhcCC--------------------CCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 55554432 22333332 45678999999999998874322 3455555555444443
Q ss_pred --HHHhhh-cCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~-~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|. .|++|+|++|+||+++ +++.++|+|||.+..+..
T Consensus 110 ~~l~~lh~~~~~~H~~l~~~ni~~~--~~~~~~l~df~~~~~~~~ 152 (264)
T cd06623 110 KGLDYLHTKRHIIHRDIKPSNLLIN--SKGEVKIADFGISKVLEN 152 (264)
T ss_pred HHHHHHhccCCCccCCCCHHHEEEC--CCCCEEEccCccceeccc
Confidence 678999 9999999999999998 468999999999887643
No 275
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.25 E-value=2.6e-11 Score=127.58 Aligned_cols=141 Identities=16% Similarity=0.175 Sum_probs=94.0
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||...+...... .. .-.+..|.
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~-~~---------------------------------~~~~~~e~ 52 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKR-NK---------------------------------VKRVLTEQ 52 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchH-HH---------------------------------HHHHHHHH
Confidence 46999999999999976 589999998865321110 00 00133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~ 277 (666)
+.+..+.+ ..+++++. ....+++|||+.|.+|.++..... ..++...+...+.++
T Consensus 53 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi 112 (316)
T cd05574 53 EILATLDH--------------------PFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEV 112 (316)
T ss_pred HHHHhCCC--------------------CCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHH
Confidence 44444322 23444442 445689999999999987643211 234444444434443
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+ +..+|..|++|+|+||.||+++ .++.++|+|||++...+.
T Consensus 113 ~~~l~~lH~~~i~H~dlkp~Nili~--~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 113 LLALEYLHLLGIVYRDLKPENILLH--ESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred HHHHHHHHHCCeeccCCChHHeEEc--CCCCEEEeecchhhcccc
Confidence 3 6788999999999999999998 458999999999876643
No 276
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.24 E-value=4.1e-11 Score=130.30 Aligned_cols=38 Identities=18% Similarity=0.295 Sum_probs=34.0
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|+||.|||++. ++.++|+|||+++.+
T Consensus 252 L~~LH~~~ivHrdlkp~NiLl~~--~~~~kL~DfGla~~~ 289 (401)
T cd05107 252 MEFLASKNCVHRDLAARNVLICE--GKLVKICDFGLARDI 289 (401)
T ss_pred HHHHhcCCcCcccCCcceEEEeC--CCEEEEEecCcceec
Confidence 67889999999999999999984 578999999998865
No 277
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.24 E-value=3.2e-11 Score=126.27 Aligned_cols=140 Identities=14% Similarity=0.079 Sum_probs=94.1
Q ss_pred ccccccceeeeeEEEEec------CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhh
Q 005995 123 ETPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~------~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 196 (666)
.+.||.|++|+||+|+.. ++..||||+.+........ -
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~ 83 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSER------------------------------------E 83 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHH------------------------------------H
Confidence 367999999999999742 4568999987654321100 0
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHc-CCCHHHHH
Q 005995 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVV 271 (666)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~-~~~~~~~~ 271 (666)
.+.+|.+.+.++.+ +..+.+.+. ....+++|||+.|++|.++...... .++...+.
T Consensus 84 ~~~~E~~~l~~l~~-------------------h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~ 144 (302)
T cd05055 84 ALMSELKIMSHLGN-------------------HENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLL 144 (302)
T ss_pred HHHHHHHHHHhccC-------------------CCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHH
Confidence 14445555555521 122333332 4567899999999998876432111 14555555
Q ss_pred HHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 272 ~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
....++. +..+|..|++|+|+||+||+++ .++.++|+|||++..+.
T Consensus 145 ~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~--~~~~~~l~dfg~~~~~~ 192 (302)
T cd05055 145 SFSYQVAKGMAFLASKNCIHRDLAARNVLLT--HGKIVKICDFGLARDIM 192 (302)
T ss_pred HHHHHHHHHHHHHHHCCeehhhhccceEEEc--CCCeEEECCCccccccc
Confidence 5444443 6788999999999999999998 45789999999987664
No 278
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.24 E-value=4.3e-11 Score=124.29 Aligned_cols=137 Identities=15% Similarity=0.195 Sum_probs=90.7
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
..||+|++|.||+|+.. +|+.||+|+..+.-.. .. .+..|.
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~--~~------------------------------------~~~~e~ 69 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDV--DE------------------------------------EIEAEY 69 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEecccccH--HH------------------------------------HHHHHH
Confidence 47999999999999975 7899999987542110 00 012233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---------cCCCeeEeeecCCccCCChhhH---HHcCCCHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESL---EAFGVNKQKV 270 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---------~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~~ 270 (666)
..+.++.+ + ..+++++. .+..++||||++|++|.++... ....+....+
T Consensus 70 ~~l~~l~~-----------------h--~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~ 130 (291)
T cd06639 70 NILQSLPN-----------------H--PNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMI 130 (291)
T ss_pred HHHHHhcC-----------------C--CCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHH
Confidence 33333311 1 12223221 1346899999999999876431 1122344444
Q ss_pred HHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 271 ~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
...+.+++ +..+|..|++|+|+||+||+++. ++.++|+|||++..+.
T Consensus 131 ~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~--~~~~kl~dfg~~~~~~ 179 (291)
T cd06639 131 SYILYGALLGLQHLHNNRIIHRDVKGNNILLTT--EGGVKLVDFGVSAQLT 179 (291)
T ss_pred HHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC--CCCEEEeecccchhcc
Confidence 44444433 77889999999999999999984 5889999999988764
No 279
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.24 E-value=2.8e-11 Score=127.40 Aligned_cols=141 Identities=15% Similarity=0.199 Sum_probs=87.1
Q ss_pred cCccccccceeeeeEEEEec---CCCEEEEEeeCCC-hHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhh
Q 005995 121 FVETPLATASIAQVHRATLV---DGRQVVVKVQHQG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (666)
Q Consensus 121 ~~~~pi~sgs~gqV~~a~l~---~g~~VAVKv~~p~-~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 196 (666)
++...||.|++|.||+|+.+ +++.||||+.+.. ...
T Consensus 4 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~---------------------------------------- 43 (317)
T cd07868 4 YEGCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISM---------------------------------------- 43 (317)
T ss_pred ccccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcH----------------------------------------
Confidence 34568999999999999865 5688999987532 111
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---cCCCeeEeeecCCccCCChhhHHH--------cCC
Q 005995 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA--------FGV 265 (666)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---~~~~vLvmE~i~G~~L~~~~~~~~--------~~~ 265 (666)
++.+|++.+.++.+. .-+.+...+. ....+++|||+++ .+.++..... ..+
T Consensus 44 ~~~~E~~~l~~l~h~-----------------niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l 105 (317)
T cd07868 44 SACREIALLRELKHP-----------------NVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQL 105 (317)
T ss_pred HHHHHHHHHHhcCCC-----------------CCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccC
Confidence 122344455444321 0122222222 2234799999976 4444322111 123
Q ss_pred CHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeC--CCCceEEEecccccccC
Q 005995 266 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLS 319 (666)
Q Consensus 266 ~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~--~~~~i~liDFG~~~~l~ 319 (666)
+...+...+.+++ +..+|..|++|+|+||.|||+..+ .++.++|+|||+++.++
T Consensus 106 ~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07868 106 PRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccC
Confidence 3333333334433 778899999999999999999532 34789999999997664
No 280
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.24 E-value=2.1e-11 Score=126.10 Aligned_cols=138 Identities=19% Similarity=0.205 Sum_probs=93.8
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChH-HHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIK-TIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~-~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
+.||.|++|.||+|+.. +|+.||||+.+.... ... +-++.+|
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~------------------------------------~~~~~~e 49 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGI------------------------------------PNQALRE 49 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccchh------------------------------------hHHHHHH
Confidence 46899999999999975 799999998754321 100 0113334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~ 277 (666)
...+.++++ ..+++++ . ....++||||+ |.+|.+........++...+...+.++
T Consensus 50 ~~~l~~~~~--------------------~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i 108 (286)
T cd07832 50 IKALQACQH--------------------PYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRML 108 (286)
T ss_pred HHHHHhCCC--------------------CCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 444444322 1222332 2 45568999999 988887643333345555555544444
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+ +..+|..|++|+|+||.||+++. ++.++|+|||++..+..
T Consensus 109 ~~~l~~lH~~~i~H~dl~p~ni~~~~--~~~~~l~dfg~~~~~~~ 151 (286)
T cd07832 109 LKGVAYMHANGIMHRDLKPANLLISA--DGVLKIADFGLARLFSE 151 (286)
T ss_pred HHHHHHHHHCCeecCCcCHHHEEEcC--CCcEEEeeeeecccccC
Confidence 3 67889999999999999999984 58899999999887654
No 281
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.24 E-value=2.2e-11 Score=126.52 Aligned_cols=136 Identities=20% Similarity=0.176 Sum_probs=87.2
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|... +|+.||||+.+...... .+..+.+|+
T Consensus 11 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~------------------------------------~~~~~~~e~ 54 (291)
T cd07870 11 EKLGEGSYATVYKGISRINGQLVALKVISMKTEEG------------------------------------VPFTAIREA 54 (291)
T ss_pred EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC------------------------------------CcHHHHHHH
Confidence 57999999999999865 79999999865332110 001123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+..+.+ ++ +++++. ....++||||++| ++.+.............+...+.++.
T Consensus 55 ~~l~~l~h------------------~n--i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~ 113 (291)
T cd07870 55 SLLKGLKH------------------AN--IVLLHDIIHTKETLTFVFEYMHT-DLAQYMIQHPGGLHPYNVRLFMFQLL 113 (291)
T ss_pred HHHHhcCC------------------CC--EeEEEEEEecCCeEEEEEecccC-CHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 44444432 22 333332 3456899999975 43333211112233334443333433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+..+|..|++|+|+||.||+++ .++.++|+|||++...
T Consensus 114 ~~L~~lH~~~i~H~dlkp~Nil~~--~~~~~~l~Dfg~~~~~ 153 (291)
T cd07870 114 RGLAYIHGQHILHRDLKPQNLLIS--YLGELKLADFGLARAK 153 (291)
T ss_pred HHHHHHHhCCcccCCCChHHEEEc--CCCcEEEecccccccc
Confidence 6788999999999999999998 4589999999998754
No 282
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.24 E-value=3.1e-11 Score=123.38 Aligned_cols=140 Identities=21% Similarity=0.161 Sum_probs=92.3
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||.|++|.||+|... +++.||+|+...+... . -++.+|.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-----~---------------------------------~~~~~e~ 53 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----V---------------------------------EEFLKEA 53 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCchH-----H---------------------------------HHHHHHH
Confidence 57999999999999975 6899999987543211 0 0133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~~-- 278 (666)
+.+.++.+. .-+.+...+. ....+++|||++|++|.+...... ..++...+...+.++.
T Consensus 54 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~ 116 (263)
T cd05052 54 AVMKEIKHP-----------------NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 116 (263)
T ss_pred HHHHhCCCC-----------------ChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 444443220 0111112222 455689999999999987643211 1244444444444433
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|++|.||+++ +++.++|+|||++..+..
T Consensus 117 l~~lH~~~i~H~dlkp~nil~~--~~~~~kl~df~~~~~~~~ 156 (263)
T cd05052 117 MEYLEKKNFIHRDLAARNCLVG--ENHLVKVADFGLSRLMTG 156 (263)
T ss_pred HHHHHhCCEeecccCcceEEEc--CCCcEEeCCCcccccccc
Confidence 6788999999999999999998 458999999999877653
No 283
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.24 E-value=2.2e-11 Score=126.05 Aligned_cols=78 Identities=19% Similarity=0.244 Sum_probs=56.6
Q ss_pred CCCeeEeeecCCccCCChhhHH--HcCCCHHHHHHHHHHHH--HHHhhh-cCccccCCCcCceEEeeCCCCceEEEeccc
Q 005995 240 SETVLILEFMDGIRLNDCESLE--AFGVNKQKVVEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGL 314 (666)
Q Consensus 240 ~~~vLvmE~i~G~~L~~~~~~~--~~~~~~~~~~~~l~~~~--l~~i~~-~g~~H~D~hPgNilv~~~~~~~i~liDFG~ 314 (666)
+..++||||++|.+|..+.... ...++...+...+.+++ +..+|. .|++|+|++|.||+++. ++.++|+|||+
T Consensus 72 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~--~~~~~l~dfg~ 149 (286)
T cd06622 72 GAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG--NGQVKLCDFGV 149 (286)
T ss_pred CeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC--CCCEEEeecCC
Confidence 4568999999999987663321 11345544444444433 567775 69999999999999984 58999999999
Q ss_pred ccccC
Q 005995 315 TKKLS 319 (666)
Q Consensus 315 ~~~l~ 319 (666)
+..+.
T Consensus 150 ~~~~~ 154 (286)
T cd06622 150 SGNLV 154 (286)
T ss_pred ccccc
Confidence 87653
No 284
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.24 E-value=1.7e-11 Score=139.36 Aligned_cols=76 Identities=21% Similarity=0.260 Sum_probs=56.7
Q ss_pred CCCeeEeeecCCccCCChhhHHHcC-CCHHHHHHHHHH--HHHHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 240 SETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITR--AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 240 ~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~~~~~l~~--~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
...+|||||++|+.|-.+. ...+ ++....--.+++ +.+..+|.-|+||||+||.|||++. .|.|+|.|||.|-
T Consensus 148 ~~LYlVMdY~pGGDlltLl--Sk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~--~GHikLADFGsCl 223 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLL--SKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDK--SGHIKLADFGSCL 223 (1317)
T ss_pred cceEEEEecccCchHHHHH--hhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecc--cCcEeeccchhHH
Confidence 4458999999999887763 3333 332222222222 2378899999999999999999994 5999999999998
Q ss_pred ccC
Q 005995 317 KLS 319 (666)
Q Consensus 317 ~l~ 319 (666)
.++
T Consensus 224 km~ 226 (1317)
T KOG0612|consen 224 KMD 226 (1317)
T ss_pred hcC
Confidence 876
No 285
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.24 E-value=2.9e-11 Score=124.91 Aligned_cols=139 Identities=14% Similarity=0.144 Sum_probs=88.5
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+.+ +|+.||||+.+....... +.++..|.
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~e~ 50 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE------------------------------------QKRLLMDL 50 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH------------------------------------HHHHHHHH
Confidence 46999999999999976 799999998765432111 01111222
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhH---HHcCCCHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEIT 275 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~~~~~l~ 275 (666)
....+.. ++ ..+++++ . .+..+++|||++| +|.++... ....++...+...+.
T Consensus 51 ~~~~~~~-----------------~~--~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~ 110 (283)
T cd06617 51 DISMRSV-----------------DC--PYTVTFYGALFREGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAV 110 (283)
T ss_pred HHHHHHc-----------------CC--CCeeeeeEEEecCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHH
Confidence 2211111 11 2233333 2 4567899999986 44443221 112344455555555
Q ss_pred HHH--HHHhhhc-CccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 276 RAY--AHQIYVD-GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 276 ~~~--l~~i~~~-g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
++. +..+|.. |++|+|+||+||+++ .++.++|+|||++..+..
T Consensus 111 qi~~~l~~lH~~~~i~h~dlkp~nil~~--~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 111 SIVKALEYLHSKLSVIHRDVKPSNVLIN--RNGQVKLCDFGISGYLVD 156 (283)
T ss_pred HHHHHHHHHhhcCCeecCCCCHHHEEEC--CCCCEEEeeccccccccc
Confidence 544 6788887 999999999999998 458999999999887643
No 286
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.24 E-value=3e-11 Score=124.93 Aligned_cols=79 Identities=14% Similarity=0.164 Sum_probs=57.5
Q ss_pred CCCeeEeeecCCccCCChhhHHH---------------cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeC
Q 005995 240 SETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD 302 (666)
Q Consensus 240 ~~~vLvmE~i~G~~L~~~~~~~~---------------~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~ 302 (666)
...++++||+++.+|.++..... ..++...+...+.++. +..+|..|++|+|+||.||+++
T Consensus 81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~-- 158 (283)
T cd05091 81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF-- 158 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec--
Confidence 45689999999998877643211 1123333344344433 6788999999999999999998
Q ss_pred CCCceEEEecccccccCH
Q 005995 303 PPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 303 ~~~~i~liDFG~~~~l~~ 320 (666)
+++.++|+|||+++.+..
T Consensus 159 ~~~~~kl~Dfg~~~~~~~ 176 (283)
T cd05091 159 DKLNVKISDLGLFREVYA 176 (283)
T ss_pred CCCceEeccccccccccc
Confidence 458899999999887643
No 287
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.23 E-value=4.5e-11 Score=121.49 Aligned_cols=141 Identities=16% Similarity=0.130 Sum_probs=90.8
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.+|.|++|.||+|+.+ +|+.||||.........- . . -.+.+|.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~--~-----------------------~----------~~~~~e~ 50 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRR--E-----------------------R----------KAAEQEA 50 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHH--H-----------------------H----------HHHHHHH
Confidence 57899999999999975 688999997642211000 0 0 0123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee--cCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ--SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~--~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~~ 278 (666)
..+.++++ ++ +.+...+. ....+++|||++|.+|.+...... ..++...+...+.++.
T Consensus 51 ~~l~~l~~------------------~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~ 112 (257)
T cd08223 51 QLLSQLKH------------------PNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIA 112 (257)
T ss_pred HHHHhCCC------------------CCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 44444322 12 11222222 223579999999998877643221 2245555555444443
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|++|.||+++ .++.++|+|||++..+.
T Consensus 113 ~~l~~lH~~~i~H~di~p~nil~~--~~~~~~l~df~~~~~~~ 153 (257)
T cd08223 113 MALQYLHEKHILHRDLKTQNVFLT--RTNIIKVGDLGIARVLE 153 (257)
T ss_pred HHHHHHHhCCeeccCCCchhEEEe--cCCcEEEecccceEEec
Confidence 6789999999999999999998 45889999999987664
No 288
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.23 E-value=2.7e-11 Score=125.57 Aligned_cols=141 Identities=20% Similarity=0.202 Sum_probs=90.2
Q ss_pred cccccceeeeeEEEEec----CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHH
Q 005995 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~----~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 199 (666)
+.||+|++|+||+|+.. +|+.||||+.+...... ... ..-.+.
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~---~~~------------------------------~~~~~~ 52 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQ---KAK------------------------------TAEHTR 52 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHh---hhh------------------------------HHHHHH
Confidence 46999999999999853 67899999875321100 000 000133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHH
Q 005995 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (666)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~ 275 (666)
+|...+.++.+ ...++.++ . ....++||||++|++|.+.... ...+....+...+.
T Consensus 53 ~E~~~l~~~~~-------------------~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ 112 (288)
T cd05583 53 TERQVLEAVRR-------------------CPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQ-REHFTESEVRVYIA 112 (288)
T ss_pred HHHHHHHhccC-------------------CcchhhhheeeecCCEEEEEEecCCCCcHHHHHhh-cCCcCHHHHHHHHH
Confidence 45555554432 11122222 1 3445799999999888765321 22344444444443
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
++. +..+|..|++|+|+||.||+++ .++.++|+|||++..+.
T Consensus 113 ql~~~l~~lH~~~~~H~dl~p~nil~~--~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 113 EIVLALDHLHQLGIIYRDIKLENILLD--SEGHVVLTDFGLSKEFL 156 (288)
T ss_pred HHHHHHHHHHHCCeeccCCCHHHeEEC--CCCCEEEEECccccccc
Confidence 433 6788999999999999999998 45889999999987654
No 289
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.23 E-value=4.3e-11 Score=121.47 Aligned_cols=137 Identities=16% Similarity=0.239 Sum_probs=95.8
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.|++|++|.||+|+.. +|+.|++|..+.... . -++.+|.
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~------------------------------------~~~~~e~ 49 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---L------------------------------------QEIIKEI 49 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---H------------------------------------HHHHHHH
Confidence 46999999999999986 489999998754211 0 0133454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++.+ ..+++++. ....+++|||++|.+|.+........++...+...+.+++
T Consensus 50 ~~~~~l~~--------------------~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~ 109 (256)
T cd06612 50 SILKQCDS--------------------PYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTL 109 (256)
T ss_pred HHHHhCCC--------------------CcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHH
Confidence 44444421 22333332 3456899999999999887543344455555555554443
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+..+|..|++|+|++|+||+++ +++.++|.|||++..+...
T Consensus 110 ~~l~~lh~~~i~H~dl~~~ni~~~--~~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 110 KGLEYLHSNKKIHRDIKAGNILLN--EEGQAKLADFGVSGQLTDT 152 (256)
T ss_pred HHHHHHHHCCcccCCCCcceEEEC--CCCcEEEcccccchhcccC
Confidence 6788999999999999999998 4588999999998877543
No 290
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.23 E-value=4.2e-11 Score=126.00 Aligned_cols=153 Identities=18% Similarity=0.178 Sum_probs=96.9
Q ss_pred hCCChhccccccCccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHH
Q 005995 110 FGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEW 188 (666)
Q Consensus 110 ~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 188 (666)
++.+++++|..+.. +|.|++|.||+|+.. +|+.|+||+..........
T Consensus 15 ~~~~~~~~~~~~~~--lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~----------------------------- 63 (313)
T cd06633 15 YKDDPEEIFVGLHE--IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNE----------------------------- 63 (313)
T ss_pred ccCCHHHHhhccee--eccCCCeEEEEEEECCCCcEEEEEEEeccccCchH-----------------------------
Confidence 45677888766554 999999999999975 7899999987532110000
Q ss_pred HHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCH
Q 005995 189 CKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK 267 (666)
Q Consensus 189 ~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~ 267 (666)
...++..|...+.++++. .-+.+...+. ....++||||+.| ++.+........++.
T Consensus 64 -----~~~~~~~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~ 120 (313)
T cd06633 64 -----KWQDIIKEVKFLQQLKHP-----------------NTIEYKGCYLKEHTAWLVMEYCLG-SASDLLEVHKKPLQE 120 (313)
T ss_pred -----HHHHHHHHHHHHHhCCCC-----------------CCccEEEEEEeCCEEEEEEecCCC-CHHHHHHhcCCCCCH
Confidence 000133344454444321 0122222222 4556899999977 444433222233454
Q ss_pred HHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 268 ~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
..+...+.+++ +..+|..|++|+|++|+||+++ .++.++|+|||++...
T Consensus 121 ~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~--~~~~~kL~dfg~~~~~ 171 (313)
T cd06633 121 VEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT--EPGQVKLADFGSASKS 171 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEEC--CCCCEEEeecCCCccc
Confidence 45444444433 6788999999999999999998 4588999999987643
No 291
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.23 E-value=3.6e-11 Score=125.50 Aligned_cols=136 Identities=15% Similarity=0.205 Sum_probs=92.5
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.|+||.......... -.+.+|.
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~-------------------------------------~~~~~e~ 67 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKK-------------------------------------ELIINEI 67 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchH-------------------------------------HHHHHHH
Confidence 46999999999999864 799999997632110000 0123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+..+++ ++ ++.++. ....++||||++|.+|.+.. ....++...+...+.++.
T Consensus 68 ~~l~~l~h------------------~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~i~~~l~ 125 (296)
T cd06655 68 LVMKELKN------------------PN--IVNFLDSFLVGDELFVVMEYLAGGSLTDVV--TETCMDEAQIAAVCRECL 125 (296)
T ss_pred HHHHhcCC------------------Cc--eeeeeeeEecCceEEEEEEecCCCcHHHHH--HhcCCCHHHHHHHHHHHH
Confidence 44443322 22 223332 45568999999999988764 333455555555444443
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|+||.||+++ .++.++|+|||++..+..
T Consensus 126 ~al~~LH~~~i~H~dL~p~Nili~--~~~~~kl~dfg~~~~~~~ 167 (296)
T cd06655 126 QALEFLHANQVIHRDIKSDNVLLG--MDGSVKLTDFGFCAQITP 167 (296)
T ss_pred HHHHHHHHCCcccCCCCHHHEEEC--CCCCEEEccCccchhccc
Confidence 6788999999999999999998 458999999999887654
No 292
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.22 E-value=2.7e-11 Score=123.49 Aligned_cols=138 Identities=14% Similarity=0.127 Sum_probs=92.1
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+.||+|++|.||+|+..+++.|++|+.+........ ++..|..
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~-------------------------------------~~~~e~~ 54 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQ-------------------------------------DFQKEVQ 54 (261)
T ss_pred hhhccCCCccEEEeEecCCCcEEEEeccccchhhHH-------------------------------------HHHHHHH
Confidence 468999999999999888999999987543211000 1223333
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHHHHHHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~l~~~~ 278 (666)
.+..+.+ ..+.+++. ....+++|||++|++|.+..... ....+...+...+.+++
T Consensus 55 ~l~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~ 114 (261)
T cd05148 55 ALKRLRH--------------------KHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVA 114 (261)
T ss_pred HHhcCCC--------------------cchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 3333321 12222221 44568999999999998764321 12234444444444433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|++|.||+++ .++.++|+|||.+..+..
T Consensus 115 ~al~~lH~~~i~h~dl~~~nilv~--~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 115 EGMAYLEEQNSIHRDLAARNILVG--EDLVCKVADFGLARLIKE 156 (261)
T ss_pred HHHHHHHHCCeeccccCcceEEEc--CCceEEEccccchhhcCC
Confidence 6788999999999999999998 458899999999877643
No 293
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.22 E-value=6.3e-11 Score=122.43 Aligned_cols=77 Identities=16% Similarity=0.207 Sum_probs=56.5
Q ss_pred CCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 241 ETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 241 ~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
..+++|||++|++|.++..... ...+...+...+.++. +..+|..|++|+|+||.||+++ .++.++|+|||++..
T Consensus 93 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~--~~~~~~l~dfg~~~~ 170 (282)
T cd06636 93 QLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLT--ENAEVKLVDFGVSAQ 170 (282)
T ss_pred EEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC--CCCCEEEeeCcchhh
Confidence 3489999999999987654322 1234433333333333 6788999999999999999998 458899999999876
Q ss_pred cC
Q 005995 318 LS 319 (666)
Q Consensus 318 l~ 319 (666)
+.
T Consensus 171 ~~ 172 (282)
T cd06636 171 LD 172 (282)
T ss_pred hh
Confidence 54
No 294
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.22 E-value=6.1e-11 Score=123.39 Aligned_cols=79 Identities=20% Similarity=0.243 Sum_probs=59.2
Q ss_pred cCCCeeEeeecCCccCCChhhHHH----------cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEA----------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHR 306 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~----------~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~ 306 (666)
....+++|||++|.+|.+...... ..++...+...+.++. +..+|..|++|+|+||+||+++. ++.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~--~~~ 168 (296)
T cd05051 91 DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGK--NYT 168 (296)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecC--CCc
Confidence 356789999999998887643211 0244555555555544 67889999999999999999984 589
Q ss_pred eEEEecccccccC
Q 005995 307 PILLDFGLTKKLS 319 (666)
Q Consensus 307 i~liDFG~~~~l~ 319 (666)
++|+|||++..+.
T Consensus 169 ~~l~dfg~~~~~~ 181 (296)
T cd05051 169 IKIADFGMSRNLY 181 (296)
T ss_pred eEEccccceeecc
Confidence 9999999987653
No 295
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.22 E-value=4.7e-11 Score=125.55 Aligned_cols=142 Identities=14% Similarity=0.208 Sum_probs=87.6
Q ss_pred cCccccccceeeeeEEEEec---CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 121 FVETPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 121 ~~~~pi~sgs~gqV~~a~l~---~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
++...||+|++|.||+|+.+ +++.||+|..+..-.. ..
T Consensus 4 ~~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~---------------------------------------~~ 44 (317)
T cd07867 4 YEGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGIS---------------------------------------MS 44 (317)
T ss_pred eeceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCc---------------------------------------HH
Confidence 34467999999999999975 4578999976542100 01
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee---cCCCeeEeeecCCccCCChhhHHH--------cCC
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA--------FGV 265 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~---~~~~vLvmE~i~G~~L~~~~~~~~--------~~~ 265 (666)
+.+|++.+.++.+ ++ +.+...+. ....+++|||++| .+.+...... ..+
T Consensus 45 ~~~E~~~l~~l~h------------------~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l 105 (317)
T cd07867 45 ACREIALLRELKH------------------PNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQL 105 (317)
T ss_pred HHHHHHHHHhCCC------------------CCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccC
Confidence 2335555444432 22 22223322 2334799999987 3433322110 113
Q ss_pred CHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeC--CCCceEEEecccccccCH
Q 005995 266 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 266 ~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~--~~~~i~liDFG~~~~l~~ 320 (666)
+...+...+.+++ +..+|..|++|+|+||.||++..+ .++.++|+|||+++.+..
T Consensus 106 ~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~ 164 (317)
T cd07867 106 PRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 164 (317)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCC
Confidence 3333333344433 778899999999999999999522 347899999999987643
No 296
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.22 E-value=1.8e-11 Score=126.50 Aligned_cols=138 Identities=14% Similarity=0.102 Sum_probs=89.6
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||+|+.+......- .+-++.+|.
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~-----------------------------------~~~~~~~ei 50 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEG-----------------------------------VPSSALREI 50 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeeccccccc-----------------------------------CccchhHHH
Confidence 46899999999999975 799999998753211000 001123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++++ ..+.+++. ....+++|||++| ++.+.........+...+...+.+++
T Consensus 51 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~ 109 (284)
T cd07839 51 CLLKELKH--------------------KNIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLL 109 (284)
T ss_pred HHHHhcCC--------------------CCeeeHHHHhccCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 44444322 11222221 4556899999986 44443221123345555555555544
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|+||+||+++ .++.++|+|||++..+.
T Consensus 110 ~al~~LH~~~i~H~dl~~~nil~~--~~~~~~l~dfg~~~~~~ 150 (284)
T cd07839 110 KGLAFCHSHNVLHRDLKPQNLLIN--KNGELKLADFGLARAFG 150 (284)
T ss_pred HHHHHHHHCCEecCCCCHHHEEEc--CCCcEEECccchhhccC
Confidence 7788999999999999999998 45899999999987653
No 297
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.22 E-value=2.1e-11 Score=132.64 Aligned_cols=131 Identities=19% Similarity=0.219 Sum_probs=87.5
Q ss_pred cccccceeeeeEEEEec---CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHH
Q 005995 124 TPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~---~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 200 (666)
..||.|++|.||+|+.. +++.||||+...+.. ..+
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~------------------------------------------~~~ 135 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKT------------------------------------------PGR 135 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEecccccc------------------------------------------HHH
Confidence 57999999999999754 467899997643210 123
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHH
Q 005995 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (666)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~ 276 (666)
|.+.+.++.| ..|++++ . ....+++||++.| .+.+.. .....+....+...+.+
T Consensus 136 E~~il~~l~h--------------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l-~~~~~l~~~~~~~i~~q 193 (392)
T PHA03207 136 EIDILKTISH--------------------RAIINLIHAYRWKSTVCMVMPKYKC-DLFTYV-DRSGPLPLEQAITIQRR 193 (392)
T ss_pred HHHHHHhcCC--------------------CCccceeeeEeeCCEEEEEehhcCC-CHHHHH-HhcCCCCHHHHHHHHHH
Confidence 4444444432 1122222 2 4456899999976 343332 11233455555555555
Q ss_pred HH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 277 ~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
++ +..+|..|++|+|+||.|||++ .++.++|+|||++..+..
T Consensus 194 l~~aL~~LH~~givHrDlkp~Nill~--~~~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 194 LLEALAYLHGRGIIHRDVKTENIFLD--EPENAVLGDFGAACKLDA 237 (392)
T ss_pred HHHHHHHHHHCCccccCCCHHHEEEc--CCCCEEEccCccccccCc
Confidence 44 7889999999999999999998 458999999999876643
No 298
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.22 E-value=2.2e-11 Score=126.86 Aligned_cols=145 Identities=19% Similarity=0.205 Sum_probs=92.4
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|... +|+.||||..+......-.. + .+-.+..|.
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~--------------------------~------~~~~~~~e~ 53 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKD--------------------------G------INFTALREI 53 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEeccccccccc--------------------------h------hhHHHHHHH
Confidence 45999999999999975 79999999876543210000 0 001123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--H
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l 279 (666)
..+.++++. .-+.+...+. ....++||||+ +++|.++.......++...+...+.++. +
T Consensus 54 ~~l~~~~h~-----------------~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al 115 (298)
T cd07841 54 KLLQELKHP-----------------NIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGL 115 (298)
T ss_pred HHHhhcCCC-----------------CChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence 444444320 0011112222 34568999999 7777765322111355555555555544 7
Q ss_pred HHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 280 ~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
..+|..|++|+|++|+||+++ .++.++|+|||++..+..
T Consensus 116 ~~lH~~~i~H~dl~p~nill~--~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 116 EYLHSNWILHRDLKPNNLLIA--SDGVLKLADFGLARSFGS 154 (298)
T ss_pred HHHHhCCeeecCCChhhEEEc--CCCCEEEccceeeeeccC
Confidence 788999999999999999999 458999999999887643
No 299
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.22 E-value=1.7e-11 Score=126.42 Aligned_cols=135 Identities=19% Similarity=0.324 Sum_probs=89.5
Q ss_pred cccccceeeeeEEEEec----CCCEEEEEeeCC-ChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQ-GIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~----~g~~VAVKv~~p-~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
++||+|+|+.||+|++. ..+.||+|-.++ .-+..+..++++|..+-.
T Consensus 42 ~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG---------------------------- 93 (418)
T KOG1167|consen 42 NKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGG---------------------------- 93 (418)
T ss_pred ccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhcc----------------------------
Confidence 57999999999999974 367899996543 233334444433222211
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..|+..+..++.. .++.++||||++-....++. ..++...+...+...+
T Consensus 94 ---~~ni~~~~~~~rn------------------------nd~v~ivlp~~~H~~f~~l~----~~l~~~~i~~Yl~~ll 142 (418)
T KOG1167|consen 94 ---SDNIIKLNGCFRN------------------------NDQVAIVLPYFEHDRFRDLY----RSLSLAEIRWYLRNLL 142 (418)
T ss_pred ---chhhhcchhhhcc------------------------CCeeEEEecccCccCHHHHH----hcCCHHHHHHHHHHHH
Confidence 0122222222221 34557899999886665542 2344445555554444
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+.++|..|++|||+||+|+|.++. .++-+|+|||++...
T Consensus 143 ~Al~~~h~~GIvHRDiKpsNFL~n~~-t~rg~LvDFgLA~~~ 183 (418)
T KOG1167|consen 143 KALAHLHKNGIVHRDIKPSNFLYNRR-TQRGVLVDFGLAQRY 183 (418)
T ss_pred HHhhhhhccCccccCCCccccccccc-cCCceEEechhHHHH
Confidence 788999999999999999999975 688999999998863
No 300
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.22 E-value=8.7e-11 Score=108.57 Aligned_cols=131 Identities=18% Similarity=0.277 Sum_probs=91.1
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+++++|+++.||+++. ++..++||+.++... +.++..|..
T Consensus 4 ~~i~~g~~~~v~~~~~-~~~~~~iK~~~~~~~---------------------------------------~~~~~~e~~ 43 (155)
T cd05120 4 KLLKGGLTNRVYLLGT-KDEDYVLKINPSREK---------------------------------------GADREREVA 43 (155)
T ss_pred eecccccccceEEEEe-cCCeEEEEecCCCCc---------------------------------------hhHHHHHHH
Confidence 5799999999999997 458999998766432 112445666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA 279 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l 279 (666)
.+..+++. ...+|+++. .+..+++|||++|.++.... . .....+...+.+. +
T Consensus 44 ~~~~l~~~------------------~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~~-~----~~~~~~~~~~~~~-l 99 (155)
T cd05120 44 ILQLLARK------------------GLPVPKVLASGESDGWSYLLMEWIEGETLDEVS-E----EEKEDIAEQLAEL-L 99 (155)
T ss_pred HHHHHHHc------------------CCCCCeEEEEcCCCCccEEEEEecCCeecccCC-H----HHHHHHHHHHHHH-H
Confidence 67776652 245677665 23589999999998887540 0 0112233333332 4
Q ss_pred HHhhh---cCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 280 HQIYV---DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 280 ~~i~~---~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
..+|. .|++|+|+||+||+++. ++.++++|||.++..++
T Consensus 100 ~~lh~~~~~~i~H~Dl~~~Nil~~~--~~~~~l~Df~~~~~~~~ 141 (155)
T cd05120 100 AKLHQLPLLVLCHGDLHPGNILVDD--GKILGIIDWEYAGYGPP 141 (155)
T ss_pred HHHhCCCceEEEecCCCcceEEEEC--CcEEEEEecccccCCCh
Confidence 45555 58999999999999984 57899999999887654
No 301
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.22 E-value=6e-11 Score=121.11 Aligned_cols=139 Identities=18% Similarity=0.151 Sum_probs=93.3
Q ss_pred cccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHHH
Q 005995 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (666)
Q Consensus 126 i~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n 204 (666)
||.|++|.||+|+.. +|+.||||+..+.....- + .+-.+.+|...
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~----------------------------~------~~~~~~~e~~~ 46 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVET----------------------------G------QQEHIFSEKEI 46 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhh----------------------------h------HHHHHHHHHHH
Confidence 689999999999975 589999998754211000 0 01124445554
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
+.++.+ ..+++++. .+..+++|||++|.+|.+...- ...+....+...+.+++
T Consensus 47 l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~i~~~ 105 (262)
T cd05572 47 LEECNH--------------------PFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRD-RGLFDEYTARFYIACVVLA 105 (262)
T ss_pred HHhCCC--------------------CCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHH
Confidence 444322 12333332 4557899999999999876431 12344444444443433
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+..+|..|++|+|++|.||+++ .++.++|+|||.+..+...
T Consensus 106 l~~lH~~~~~h~dl~~~nilv~--~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 106 FEYLHNRGIIYRDLKPENLLLD--SNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred HHHHhhCCcccCCCCHHHEEEc--CCCCEEEeeCCcccccCcc
Confidence 7889999999999999999998 4589999999999887654
No 302
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.22 E-value=5.9e-11 Score=124.88 Aligned_cols=80 Identities=15% Similarity=0.155 Sum_probs=58.9
Q ss_pred cCCCeeEeeecCCccCCChhhHHH---------------cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEee
Q 005995 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~---------------~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~ 301 (666)
....+++|||++|++|.++..... ..++...+...+.++. +..+|..|++|+|+||+||+++
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~- 168 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVT- 168 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEc-
Confidence 345689999999999987743211 1233344444444433 6788999999999999999998
Q ss_pred CCCCceEEEecccccccCH
Q 005995 302 DPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 302 ~~~~~i~liDFG~~~~l~~ 320 (666)
.+++++|+|||.++.+..
T Consensus 169 -~~~~~kL~Dfg~~~~~~~ 186 (314)
T cd05099 169 -EDNVMKIADFGLARGVHD 186 (314)
T ss_pred -CCCcEEEccccccccccc
Confidence 458999999999987643
No 303
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.22 E-value=5e-11 Score=121.71 Aligned_cols=139 Identities=15% Similarity=0.211 Sum_probs=93.7
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||.|++|+||+|... +|..|+||+........ +. -++.+|+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~---------------------------------~~~~~e~ 50 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT---SV---------------------------------DELRKEV 50 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch---HH---------------------------------HHHHHHH
Confidence 57999999999999965 78999999875322111 00 0133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH--cCCCHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITR 276 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~--~~~~~~~~~~~l~~ 276 (666)
..+..+.+ ..++.++. ....+++||+++|.+|.+...... ..++...+...+.+
T Consensus 51 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~q 110 (267)
T cd06610 51 QAMSQCNH--------------------PNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKE 110 (267)
T ss_pred HHHHhcCC--------------------CCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHH
Confidence 44443322 12333332 455689999999999887753221 23454444444444
Q ss_pred HH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 277 ~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
++ +..+|..|++|+|++|.||++++ ++.++|+|||++..+..
T Consensus 111 l~~al~~lh~~~i~h~~l~p~ni~~~~--~~~~~l~df~~~~~~~~ 154 (267)
T cd06610 111 VLKGLEYLHSNGQIHRDIKAGNILLGE--DGSVKIADFGVSASLAD 154 (267)
T ss_pred HHHHHHHHHhCCeecCCCCHHhEEEcC--CCCEEEcccchHHHhcc
Confidence 43 67889999999999999999984 57899999999877654
No 304
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.22 E-value=7e-11 Score=123.90 Aligned_cols=150 Identities=18% Similarity=0.151 Sum_probs=93.8
Q ss_pred ChhccccccCccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHh
Q 005995 113 SMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (666)
Q Consensus 113 ~~~~~f~~~~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (666)
.+++.|... +.||+|++|.||+|+.. +|+.||+|+..........
T Consensus 12 ~~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~-------------------------------- 57 (307)
T cd06607 12 DPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNE-------------------------------- 57 (307)
T ss_pred Ccchhhhhh--eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHH--------------------------------
Confidence 444555544 45999999999999975 7899999986432110000
Q ss_pred chhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHH
Q 005995 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQK 269 (666)
Q Consensus 192 ~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ 269 (666)
..-++.+|...+..+.+ ++ +.+...+. ....++||||++|. +.+........++...
T Consensus 58 --~~~~~~~Ei~~l~~l~h------------------~niv~~~~~~~~~~~~~lv~e~~~g~-l~~~~~~~~~~l~~~~ 116 (307)
T cd06607 58 --KWQDIIKEVRFLQQLRH------------------PNTIEYKGCYLREHTAWLVMEYCLGS-ASDILEVHKKPLQEVE 116 (307)
T ss_pred --HHHHHHHHHHHHHhCCC------------------CCEEEEEEEEEeCCeEEEEHHhhCCC-HHHHHHHcccCCCHHH
Confidence 00113345444444332 22 22222222 45568999999874 3333222223345555
Q ss_pred HHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 270 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 270 ~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+...+.++. +..+|..|++|+|++|+||+++ .++.++|+|||++...+
T Consensus 117 ~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~--~~~~~kL~dfg~~~~~~ 166 (307)
T cd06607 117 IAAICHGALQGLAYLHSHERIHRDIKAGNILLT--EPGTVKLADFGSASLVS 166 (307)
T ss_pred HHHHHHHHHHHHHHHHHCCceecCCCcccEEEC--CCCCEEEeecCcceecC
Confidence 444444433 6788999999999999999998 45899999999987654
No 305
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.22 E-value=7.4e-11 Score=120.92 Aligned_cols=138 Identities=17% Similarity=0.169 Sum_probs=92.9
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
++||+|++|.||+|... +++.|++|+........ -++.+|.
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--------------------------------------~~~~~e~ 53 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEE--------------------------------------EEIKEEY 53 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCchhH--------------------------------------HHHHHHH
Confidence 67999999999999975 68899999976543210 0133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---c-------CCCeeEeeecCCccCCChhhHHH---cCCCHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---S-------SETVLILEFMDGIRLNDCESLEA---FGVNKQK 269 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---~-------~~~vLvmE~i~G~~L~~~~~~~~---~~~~~~~ 269 (666)
..+.++.+ +..+++++. . ...++||||++|.+|.++..... ..++...
T Consensus 54 ~~l~~~~~-------------------h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~ 114 (275)
T cd06608 54 NILRKYSN-------------------HPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEW 114 (275)
T ss_pred HHHHHhcC-------------------CCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHH
Confidence 44444421 112333322 1 12479999999999987644222 2344444
Q ss_pred HHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 270 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 270 ~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+...+.+++ +..+|..|++|+|++|.||+++. ++.++|+|||++..+..
T Consensus 115 ~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~--~~~~~l~d~~~~~~~~~ 165 (275)
T cd06608 115 IAYILRETLRGLAYLHENKVIHRDIKGQNILLTK--NAEVKLVDFGVSAQLDS 165 (275)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEcc--CCeEEECCCccceeccc
Confidence 444444433 67889999999999999999984 58899999999876643
No 306
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.22 E-value=5.3e-11 Score=123.74 Aligned_cols=143 Identities=17% Similarity=0.198 Sum_probs=89.9
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+-||+|++|.||+|+.. +|+.||||+.+...... + ...++.+|.
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~----------------------~-------------~~~~~~~E~ 51 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE----------------------G-------------IPPTALREI 51 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhcccc----------------------C-------------CchHHHHHH
Confidence 46899999999999975 79999999764321100 0 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeec-CC-----CeeEeeecCCccCCChhhHHH----cCCCHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-SE-----TVLILEFMDGIRLNDCESLEA----FGVNKQKVVE 272 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~-~~-----~vLvmE~i~G~~L~~~~~~~~----~~~~~~~~~~ 272 (666)
..+..+.+. ..-+.+..+... .. .++||||++| ++.+...... ..++...+..
T Consensus 52 ~~l~~l~~~----------------~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~ 114 (295)
T cd07837 52 SLLQMLSES----------------IYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKS 114 (295)
T ss_pred HHHHHccCC----------------CCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHH
Confidence 555444321 001122222221 11 4899999998 5655432211 1234555555
Q ss_pred HHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 273 ~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.+.++. +..+|..|++|+|+||+||+++.+ ++.++|+|||++..+.
T Consensus 115 ~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~-~~~~kl~dfg~~~~~~ 162 (295)
T cd07837 115 FMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ-KGLLKIADLGLGRAFS 162 (295)
T ss_pred HHHHHHHHHHHHHHCCeeecCCChHHEEEecC-CCeEEEeecccceecC
Confidence 555544 778899999999999999999852 5889999999987653
No 307
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.21 E-value=4.7e-11 Score=121.80 Aligned_cols=78 Identities=14% Similarity=0.212 Sum_probs=57.1
Q ss_pred CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 240 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
+..+++|||+.|++|.++............+...+.++. +..+|..|++|+|++|.||+++ +++.++|+|||++..
T Consensus 70 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~--~~~~~kl~dfg~~~~ 147 (262)
T cd05058 70 GSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD--ESFTVKVADFGLARD 147 (262)
T ss_pred CCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc--CCCcEEECCcccccc
Confidence 346899999999998876432222233344443333333 6788999999999999999998 458899999999876
Q ss_pred cC
Q 005995 318 LS 319 (666)
Q Consensus 318 l~ 319 (666)
+.
T Consensus 148 ~~ 149 (262)
T cd05058 148 IY 149 (262)
T ss_pred cc
Confidence 54
No 308
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.21 E-value=6.3e-11 Score=121.24 Aligned_cols=141 Identities=15% Similarity=0.104 Sum_probs=91.9
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+-||+|++|.||+|... +|+.||||+.+......-. ...+ -.+.+|+
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~----------------------~~~~----------~~~~~E~ 55 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPET----------------------SKEV----------NALECEI 55 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCccc----------------------HHHH----------HHHHHHH
Confidence 56999999999999975 6999999986532110000 0000 0144566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---c---CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---S---SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---~---~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~ 276 (666)
..+.++.+ ..+++.+. . ...+++|||++|++|.+.... ...++.......+.+
T Consensus 56 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~ 114 (265)
T cd06652 56 QLLKNLLH--------------------ERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKS-YGALTENVTRKYTRQ 114 (265)
T ss_pred HHHHhcCC--------------------CCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHH
Confidence 66665533 12333332 1 224689999999999876431 122344444443333
Q ss_pred HH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 277 ~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+. +..+|..|++|+|++|.||+++ +++.++|+|||++..+.
T Consensus 115 l~~~l~~lH~~~i~H~dl~p~nil~~--~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 115 ILEGVSYLHSNMIVHRDIKGANILRD--SVGNVKLGDFGASKRLQ 157 (265)
T ss_pred HHHHHHHHHhCCEecCCCCHHHEEec--CCCCEEECcCccccccc
Confidence 33 6788999999999999999998 46899999999987653
No 309
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.21 E-value=6.8e-11 Score=122.46 Aligned_cols=147 Identities=17% Similarity=0.208 Sum_probs=99.6
Q ss_pred hhccccccCccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhc
Q 005995 114 MGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (666)
Q Consensus 114 ~~~~f~~~~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~ 192 (666)
..+.|... +.+++|++|+||+|... +++.|++|+.+.... +
T Consensus 17 ~~~~~~~~--~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~------------------------------- 58 (286)
T cd06614 17 PRELYKNL--EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----N------------------------------- 58 (286)
T ss_pred ccccchHh--HhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----h-------------------------------
Confidence 34445433 57999999999999986 789999999865432 0
Q ss_pred hhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHH
Q 005995 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 270 (666)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~ 270 (666)
+-.+..|...+.++.+ ++ +.+...+. ....+++|||++|.+|.++.......++...+
T Consensus 59 --~~~~~~e~~~l~~l~~------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~ 118 (286)
T cd06614 59 --KELIINEILIMKDCKH------------------PNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQI 118 (286)
T ss_pred --HHHHHHHHHHHHHCCC------------------CCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHH
Confidence 0012234444443322 11 22222222 46678999999999999875433224565555
Q ss_pred HHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 271 ~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
...+.+++ +..+|..|++|+|++|.||+++ .++.++|+|||.+..+..
T Consensus 119 ~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~--~~~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 119 AYVCREVLQGLEYLHSQNVIHRDIKSDNILLS--KDGSVKLADFGFAAQLTK 168 (286)
T ss_pred HHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc--CCCCEEECccchhhhhcc
Confidence 55555544 6788999999999999999998 458999999998876543
No 310
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.21 E-value=2.5e-11 Score=123.54 Aligned_cols=141 Identities=12% Similarity=0.126 Sum_probs=94.4
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
++||.|++|.||+|+.. +|+.||+|+......... + ..-++.+|.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~----~------------------------------~~~~~~~e~ 51 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEK----G------------------------------SVRNVLNER 51 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcch----h------------------------------HHHHHHHHH
Confidence 57999999999999976 699999998753211000 0 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++.+ ..++.++. ....++||||++|.+|.+..... ...+...+...+.+++
T Consensus 52 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~ 110 (258)
T cd05578 52 RILQELNH--------------------PFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIV 110 (258)
T ss_pred HHHHhCCC--------------------CChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHH
Confidence 43333322 12222221 34568999999999998764322 2456656655555544
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+..+|..|++|+|++|.||+++ .++.++|+|||.+......
T Consensus 111 ~~l~~lh~~~i~h~dl~~~nil~~--~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 111 LALEYLHSKGIIHRDIKPDNILLD--EQGHVHITDFNIATKVTPD 153 (258)
T ss_pred HHHHHHHhCCeeccCCCHHHeEEc--CCCCEEEeecccccccCCC
Confidence 7788999999999999999998 4589999999998776543
No 311
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.21 E-value=5e-11 Score=121.97 Aligned_cols=144 Identities=16% Similarity=0.138 Sum_probs=94.6
Q ss_pred cccccceeeeeEEEEe-cCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l-~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|.. .+|+.||+|+.++........ .+ ..-++.+|+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~-~~------------------------------~~~~~~~e~ 54 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQ-EE------------------------------VVEALRKEI 54 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhH-HH------------------------------HHHHHHHHH
Confidence 5689999999999986 489999999876432111000 00 001244466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++++ ..+++++. ....+++|||++|.+|.++... ...++...+...+.+++
T Consensus 55 ~~l~~l~h--------------------~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~ 113 (268)
T cd06630 55 RLMARLNH--------------------PHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLL 113 (268)
T ss_pred HHHHHcCC--------------------CceehhhceeccCCeEEEEEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHH
Confidence 66655543 11222222 3456899999999999876432 22344444444444433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|++|+||+++.+ +..++|+|||.+..+..
T Consensus 114 ~al~~LH~~~i~H~~i~~~nil~~~~-~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 114 RGLSYLHENQIIHRDVKGANLLIDST-GQRLRIADFGAAARLAA 156 (268)
T ss_pred HHHHHHHhCCeecCCCCHHHEEEcCC-CCEEEEccccccccccc
Confidence 678899999999999999999743 24689999999887754
No 312
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.21 E-value=6.1e-11 Score=120.04 Aligned_cols=140 Identities=17% Similarity=0.121 Sum_probs=95.6
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.|+||+.+....... . . -.+.+|.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--~-----------------------~----------~~~~~e~ 50 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEE--E-----------------------L----------EALEREI 50 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccchH--H-----------------------H----------HHHHHHH
Confidence 67999999999999976 799999998765432100 0 0 0123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----c--CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~ 276 (666)
..+.++.+ ..+.+++. . ...+++|||++|.+|.++.... ..++...+...+.+
T Consensus 51 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~ 109 (260)
T cd06606 51 RILSSLQH--------------------PNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKF-GKLPEPVIRKYTRQ 109 (260)
T ss_pred HHHHHcCC--------------------CCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHH
Confidence 44444322 12333332 2 4568999999999998874322 24555555554444
Q ss_pred HH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 277 ~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
++ +..+|..|++|+|++|.||+++ +++.++|+|||.+......
T Consensus 110 l~~~l~~lh~~~~~h~dl~p~ni~i~--~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 110 ILEGLAYLHSNGIVHRDIKGANILVD--SDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred HHHHHHHHHHCCccccCCCHHHEEEc--CCCCEEEcccccEEecccc
Confidence 43 6788999999999999999999 4589999999998877654
No 313
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.21 E-value=6.1e-11 Score=121.74 Aligned_cols=76 Identities=13% Similarity=0.139 Sum_probs=53.9
Q ss_pred CCCeeEeeecCCccCCChhhHHHcC---CCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccc
Q 005995 240 SETVLILEFMDGIRLNDCESLEAFG---VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 314 (666)
Q Consensus 240 ~~~vLvmE~i~G~~L~~~~~~~~~~---~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~ 314 (666)
...++||||++|++|.++....... .+...+...+.++. +..+|..|++|+|+||.|||++ .++.++|+|||+
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~--~~~~~~l~Dfg~ 145 (268)
T cd05086 68 IPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLT--SDLTVKVGDYGI 145 (268)
T ss_pred CccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEc--CCccEEeccccc
Confidence 4568999999999998764322111 12222222233322 6788999999999999999998 458899999998
Q ss_pred ccc
Q 005995 315 TKK 317 (666)
Q Consensus 315 ~~~ 317 (666)
+..
T Consensus 146 ~~~ 148 (268)
T cd05086 146 GPS 148 (268)
T ss_pred ccc
Confidence 764
No 314
>PTZ00284 protein kinase; Provisional
Probab=99.21 E-value=3.6e-11 Score=133.80 Aligned_cols=143 Identities=15% Similarity=0.065 Sum_probs=84.0
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||.|++|.||+|+.. +|+.||||+.+.... ...+ +..|.
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~--~~~~------------------------------------~~~e~ 176 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK--YTRD------------------------------------AKIEI 176 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecchh--hHHH------------------------------------HHHHH
Confidence 46999999999999875 688999998753110 0000 11223
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
..++++++.-. .....-+.+...+. ....++|||++ |..|.++.. ....+....+...+.+++
T Consensus 177 ~~l~~l~~~~~-----------~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~-~~~~l~~~~~~~i~~qi~~a 243 (467)
T PTZ00284 177 QFMEKVRQADP-----------ADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIM-KHGPFSHRHLAQIIFQTGVA 243 (467)
T ss_pred HHHHHHhhcCc-----------ccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 33333332100 00001122223332 23468999988 445544422 222345555555555543
Q ss_pred HHHhhh-cCccccCCCcCceEEeeCCC--------------CceEEEecccccc
Q 005995 279 AHQIYV-DGFFNGDPHPGNFLVSKDPP--------------HRPILLDFGLTKK 317 (666)
Q Consensus 279 l~~i~~-~g~~H~D~hPgNilv~~~~~--------------~~i~liDFG~~~~ 317 (666)
+..+|. .|++||||||+|||++.++. +.++|+|||.+..
T Consensus 244 L~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~ 297 (467)
T PTZ00284 244 LDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCD 297 (467)
T ss_pred HHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcccc
Confidence 778897 59999999999999984311 2589999998654
No 315
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.21 E-value=5.3e-11 Score=123.40 Aligned_cols=137 Identities=18% Similarity=0.185 Sum_probs=90.5
Q ss_pred cccccceeeeeEEEEec------CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~------~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
..||.|++|+||+|... ++..||||+.+.+....... +
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~------------------------------------~ 54 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA------------------------------------D 54 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHH------------------------------------H
Confidence 57999999999999863 46889999876543211110 1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH-----------
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 262 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~----------- 262 (666)
+.+|...+.++.+ ..+.+++. ....+++|||++|++|.+......
T Consensus 55 ~~~ei~~l~~l~h--------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 114 (288)
T cd05050 55 FQREAALMAEFDH--------------------PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHST 114 (288)
T ss_pred HHHHHHHHHhcCC--------------------CchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccc
Confidence 3345444444322 12333332 345689999999998877643211
Q ss_pred ----------cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 263 ----------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 263 ----------~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
..++...+...+.+++ +..+|..|++|+|+||.||+++ .++.++|+|||++..+
T Consensus 115 ~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~--~~~~~~l~dfg~~~~~ 180 (288)
T cd05050 115 SSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVG--ENMVVKIADFGLSRNI 180 (288)
T ss_pred cccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEec--CCCceEECccccceec
Confidence 0122333344444433 6788999999999999999998 4589999999998754
No 316
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.21 E-value=4.8e-11 Score=123.56 Aligned_cols=137 Identities=19% Similarity=0.227 Sum_probs=89.4
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|... +|+.||+|+...+....... ++.+|.
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~------------------------------------~~~~E~ 54 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRK------------------------------------QILREL 54 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHH------------------------------------HHHHHH
Confidence 46999999999999965 78999999876432211110 133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+..+++ ..+++.+. ....+|||||++|.+|.++... ...++...+.....++.
T Consensus 55 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~ 113 (284)
T cd06620 55 QIMHECRS--------------------PYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKK-GGPIPVEILGKIAVAVV 113 (284)
T ss_pred HHHHHcCC--------------------CCcceEeeeEecCCEEEEEEecCCCCCHHHHHHh-ccCCCHHHHHHHHHHHH
Confidence 44444322 22333332 4567899999999998776322 11233333333333322
Q ss_pred --HHHhhh-cCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~-~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|. +|++|+|++|.||+++ .+++++|+|||++..+.
T Consensus 114 ~~l~~LH~~~~i~H~dl~p~nil~~--~~~~~~l~d~gl~~~~~ 155 (284)
T cd06620 114 EGLTYLYNVHRIMHRDIKPSNILVN--SRGQIKLCDFGVSGELI 155 (284)
T ss_pred HHHHHHHHhcCeeccCCCHHHEEEC--CCCcEEEccCCcccchh
Confidence 566775 6999999999999998 45899999999987653
No 317
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.21 E-value=5.2e-11 Score=121.25 Aligned_cols=140 Identities=19% Similarity=0.195 Sum_probs=91.1
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.+|+|++|.||+|... +|+.||+|+........... . .+..|.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~-----------------------------~------~~~~e~ 50 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEK-----------------------------Q------QLVSEV 50 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHH-----------------------------H------HHHHHH
Confidence 57999999999999864 78999999875321110000 0 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee------cCCCeeEeeecCCccCCChhhHH---HcCCCHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEE 273 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~------~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~~~~~ 273 (666)
..+.++.+ ..+++++. ....+++|||++|.+|.++.... ...++...+...
T Consensus 51 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~ 110 (265)
T cd08217 51 NILRELKH--------------------PNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRI 110 (265)
T ss_pred HHHHhcCC--------------------CccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHH
Confidence 44444322 12222221 12347999999999998774322 123444444444
Q ss_pred HHHHH--HHHhh-----hcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 274 ITRAY--AHQIY-----VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 274 l~~~~--l~~i~-----~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+.++. +..+| ..|++|+|+||+||+++ .++.++|+|||++..+..
T Consensus 111 ~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~--~~~~~kl~d~g~~~~~~~ 162 (265)
T cd08217 111 LTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD--ANNNVKLGDFGLAKILGH 162 (265)
T ss_pred HHHHHHHHHHHhcCccccCcceecCCCHHHEEEe--cCCCEEEecccccccccC
Confidence 44433 67788 88999999999999999 458999999999987754
No 318
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.21 E-value=3.4e-11 Score=138.88 Aligned_cols=141 Identities=19% Similarity=0.192 Sum_probs=91.9
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+-+|.||+|+||+|+..+|+.||+||++|-..-.+-.-.+++.+|- ..+..
T Consensus 704 ~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk-----------------------------~~~~~ 754 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLK-----------------------------PQMLP 754 (974)
T ss_pred eeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhc-----------------------------hhhhc
Confidence 5699999999999998889999999999865433322222222111 00000
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQ 281 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~ 281 (666)
.+..+...+- ..+..+||+||.+-++|-++.- .....+..-++-..++++ +++
T Consensus 755 ~~~~~~~a~~------------------------~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~ 809 (974)
T KOG1166|consen 755 SIMHISSAHV------------------------FQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEH 809 (974)
T ss_pred chHHHHHHHc------------------------cCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHH
Confidence 1111111110 0455689999999999988743 223344444444444543 899
Q ss_pred hhhcCccccCCCcCceEEeeC-----CCCceEEEeccccccc
Q 005995 282 IYVDGFFNGDPHPGNFLVSKD-----PPHRPILLDFGLTKKL 318 (666)
Q Consensus 282 i~~~g~~H~D~hPgNilv~~~-----~~~~i~liDFG~~~~l 318 (666)
+|..|||||||||.|+|++.. +...|.|||||.+-.+
T Consensus 810 lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 810 LHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred HHhcceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 999999999999999999742 1234899999987644
No 319
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.21 E-value=2.7e-11 Score=139.68 Aligned_cols=137 Identities=20% Similarity=0.235 Sum_probs=105.6
Q ss_pred cccccceeeeeEEEEec--CCC----EEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 124 TPLATASIAQVHRATLV--DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~--~g~----~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
+.||.|.||.||+|+.. +|. .||||..++.... .++.|
T Consensus 698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~------------------------------------~~~~~ 741 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSE------------------------------------QEVSD 741 (1025)
T ss_pred eeeccccccceEEEEEecCCCCccceEEEEEeccccCCH------------------------------------HHHHH
Confidence 68999999999999976 454 3888876654322 24556
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHH------HcCCCH
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE------AFGVNK 267 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~------~~~~~~ 267 (666)
|.+||..+..|.| ++ |-+... .....+++|||+|+.|..+.... ...+..
T Consensus 742 Fl~Ea~~m~~f~H------------------pN--iv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~ 801 (1025)
T KOG1095|consen 742 FLKEALLMSKFDH------------------PN--IVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSM 801 (1025)
T ss_pred HHHHHHHHhcCCC------------------cc--eeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCH
Confidence 8999999988755 22 223332 57779999999999998886544 345667
Q ss_pred HHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 268 ~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
.+++...+++. ++.+.+.+||||||-..|+|++. ...+++.||||++.+
T Consensus 802 ~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~--~r~VKIaDFGlArDi 852 (1025)
T KOG1095|consen 802 RDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDE--RRVVKIADFGLARDI 852 (1025)
T ss_pred HHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecc--cCcEEEcccchhHhh
Confidence 77777777766 88888999999999999999994 478999999999844
No 320
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.20 E-value=8.6e-11 Score=125.31 Aligned_cols=152 Identities=17% Similarity=0.235 Sum_probs=93.8
Q ss_pred HhCCChhccccccC-ccccccceeeeeEEEEec-CCCEEEEEeeCCChH-HHHHHHHHHHHHHHHHHHhhCCCCChHHHH
Q 005995 109 EFGESMGGMFMDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIK-TIILEDLKNAKSIVDWIAWAEPQYDFNPII 185 (666)
Q Consensus 109 ~~g~~~~~~f~~~~-~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~-~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~ 185 (666)
+.++.+.++...|. .++||+|++|.||+|+.. +|+.||||+.+.... +...
T Consensus 5 ~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~-------------------------- 58 (342)
T cd07879 5 EVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFA-------------------------- 58 (342)
T ss_pred hhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccch--------------------------
Confidence 45555545555553 479999999999999965 799999998753211 1000
Q ss_pred HHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-------cCCCeeEeeecCCccCCChh
Q 005995 186 DEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCE 258 (666)
Q Consensus 186 ~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-------~~~~vLvmE~i~G~~L~~~~ 258 (666)
.++.+|.+.+.++.+.. -+.+...+. ....++||||+.+ .+.+
T Consensus 59 ----------~~~~~e~~~l~~l~h~n-----------------iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~-- 108 (342)
T cd07879 59 ----------KRAYRELTLLKHMQHEN-----------------VIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQK-- 108 (342)
T ss_pred ----------hHHHHHHHHHHhcCCCC-----------------ccchhheecccccCCCCceEEEEeccccc-CHHH--
Confidence 01222333333332200 011111111 1334899999964 3322
Q ss_pred hHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 259 SLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 259 ~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.....++...+...+.+++ +..+|..|++|+|+||+||+++ .++.++|+|||++...+
T Consensus 109 -~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~--~~~~~kL~dfg~~~~~~ 168 (342)
T cd07879 109 -IMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN--EDCELKILDFGLARHAD 168 (342)
T ss_pred -HHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC--CCCCEEEeeCCCCcCCC
Confidence 2223455555555444444 7788999999999999999998 46899999999987654
No 321
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.20 E-value=3.8e-11 Score=124.27 Aligned_cols=143 Identities=18% Similarity=0.167 Sum_probs=93.1
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+.. +|+.||||+.+...... +.. -.+.+|.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~-----------------------------~~~------~~~~~e~ 51 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDE-----------------------------DVK------KTALREV 51 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccc-----------------------------cch------hHHHHHH
Confidence 46999999999999976 68999999765422100 000 0133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--H
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l 279 (666)
+.+.++.+. .-+.+...+. ....+++|||++|..+..+.. ...+++...+...+.+++ +
T Consensus 52 ~~l~~l~~~-----------------~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l 113 (288)
T cd07833 52 KVLRQLRHE-----------------NIVNLKEAFRRKGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAI 113 (288)
T ss_pred HHHHhcCCC-----------------CeeehhheEEECCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHH
Confidence 454444320 0111222222 345689999999866654321 223355555555444444 7
Q ss_pred HHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 280 ~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
..+|..|++|+|++|+||+++ .++.++|+|||++..+...
T Consensus 114 ~~LH~~~i~H~dl~~~ni~~~--~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 114 AYCHSHNIIHRDIKPENILVS--ESGVLKLCDFGFARALRAR 153 (288)
T ss_pred HHHHHCCeecCCCCHHHeEEC--CCCCEEEEeeecccccCCC
Confidence 788999999999999999998 4689999999998876543
No 322
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.20 E-value=5e-11 Score=128.53 Aligned_cols=140 Identities=19% Similarity=0.209 Sum_probs=99.5
Q ss_pred cccccceeeeeEEEEec--CC---CEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 124 TPLATASIAQVHRATLV--DG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~--~g---~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
+-||+|.||.||+|+++ ++ .+||||..+-.-. ... ..-.+|
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~--~~~--------------------------------~~~~e~ 208 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSE--LTK--------------------------------EQIKEF 208 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeeccccc--ccH--------------------------------HHHHHH
Confidence 68999999999999986 33 2389996543100 000 011237
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHH
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l 274 (666)
.+||+.+..+.| ..|-+.|. ....+||||+|.|++|.+...-....++..+-..-+
T Consensus 209 m~EArvMr~l~H--------------------~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~ 268 (474)
T KOG0194|consen 209 MKEARVMRQLNH--------------------PNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFC 268 (474)
T ss_pred HHHHHHHHhCCC--------------------CCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHH
Confidence 789988887644 34556664 466789999999999998854333235555555555
Q ss_pred HHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 275 ~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.++. +..+|..+++||||-..|+|++. ++.+++.|||+++.-+
T Consensus 269 ~~AA~Gl~YLh~k~~IHRDIAARNcL~~~--~~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 269 YDAARGLEYLHSKNCIHRDIAARNCLYSK--KGVVKISDFGLSRAGS 313 (474)
T ss_pred HHHHhHHHHHHHCCCcchhHhHHHheecC--CCeEEeCccccccCCc
Confidence 5544 88899999999999999999983 3567999999977654
No 323
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.20 E-value=5.7e-11 Score=127.26 Aligned_cols=74 Identities=20% Similarity=0.423 Sum_probs=54.5
Q ss_pred CCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 241 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
..++||||++| ++.+.. . ..++...+...+.+++ +..+|..|++|+|+||+||+++ .++.++|+|||++...
T Consensus 95 ~~~lv~e~~~~-~l~~~~--~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~--~~~~~kL~Dfg~~~~~ 168 (353)
T cd07850 95 DVYLVMELMDA-NLCQVI--Q-MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTA 168 (353)
T ss_pred cEEEEEeccCC-CHHHHH--h-hcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC--CCCCEEEccCccceeC
Confidence 35899999987 444332 1 1255555544444443 7889999999999999999998 4589999999999876
Q ss_pred CH
Q 005995 319 SS 320 (666)
Q Consensus 319 ~~ 320 (666)
..
T Consensus 169 ~~ 170 (353)
T cd07850 169 GT 170 (353)
T ss_pred CC
Confidence 43
No 324
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.19 E-value=5.9e-11 Score=125.40 Aligned_cols=140 Identities=15% Similarity=0.280 Sum_probs=94.9
Q ss_pred ccccccceeeeeEEEEecCC--CEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHH
Q 005995 123 ETPLATASIAQVHRATLVDG--RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~~g--~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 200 (666)
...||+|+||+||.+...+. +.+|+|+........- . .+..
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~------------------------------------~-~l~~ 65 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP------------------------------------S-VLKI 65 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC------------------------------------c-cchh
Confidence 46899999999999997543 5899998754221100 0 0122
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecC-----CCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHH
Q 005995 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS-----ETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEI 274 (666)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~-----~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l 274 (666)
|...+..+... .....+|.++..+ -+++||+.+ |.+|.++..... ..++...++...
T Consensus 66 E~~vl~~l~~~----------------~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia 128 (322)
T KOG1164|consen 66 EIQVLKKLEKK----------------NGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIA 128 (322)
T ss_pred HHHHHHHHhhh----------------cCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHH
Confidence 33333333220 0134577776532 368999987 888888653332 446677777777
Q ss_pred HHHH--HHHhhhcCccccCCCcCceEEeeCC-C--CceEEEeccccc
Q 005995 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-P--HRPILLDFGLTK 316 (666)
Q Consensus 275 ~~~~--l~~i~~~g~~H~D~hPgNilv~~~~-~--~~i~liDFG~~~ 316 (666)
.+.+ ++.+|+.|++|||+||+|+++.... . ..+.|+|||+++
T Consensus 129 ~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 129 IQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred HHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 7765 9999999999999999999998532 1 468999999999
No 325
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.19 E-value=5.5e-11 Score=123.66 Aligned_cols=139 Identities=15% Similarity=0.126 Sum_probs=94.0
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||.|++|.||+|+.+ +|+.||||..+...... . ....+.+|.
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~------~~~~~~~e~ 55 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE-----------------------------G------FPITSLREI 55 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc-----------------------------c------chhhHHHHH
Confidence 57999999999999976 68999999875432110 0 001133355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-c--CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~ 276 (666)
..+.++++ ++ ++.++ . . ...+|+|||++| +|.++.......++...+...+.+
T Consensus 56 ~~l~~l~h------------------~n--i~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~q 114 (293)
T cd07843 56 NILLKLQH------------------PN--IVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQ 114 (293)
T ss_pred HHHHhcCC------------------CC--EEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHH
Confidence 55544432 22 23332 1 3 567999999986 665553322223566666665555
Q ss_pred HH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 277 ~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
++ +..+|..|++|+|++|+||+++ .++.++|+|||++..+..
T Consensus 115 i~~aL~~LH~~~i~H~dl~p~nili~--~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 115 LLSGVAHLHDNWILHRDLKTSNLLLN--NRGILKICDFGLAREYGS 158 (293)
T ss_pred HHHHHHHHHHCCeeeccCCHHHEEEC--CCCcEEEeecCceeeccC
Confidence 44 7888999999999999999998 458899999999887654
No 326
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.19 E-value=7.8e-11 Score=122.18 Aligned_cols=137 Identities=20% Similarity=0.216 Sum_probs=91.5
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|... +|+.|++|+.+-..... +-.+.+|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~-------------------------------------~~~~~~e~ 67 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQR-------------------------------------RELLFNEV 67 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhH-------------------------------------HHHHHHHH
Confidence 58999999999999864 78999999753211100 00022343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcce-eeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
..+..+.+ +++ .+...+. ....+++|||++|.+|.+... ....+...+...+.+++
T Consensus 68 ~~l~~~~h------------------~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~~ 127 (285)
T cd06648 68 VIMRDYQH------------------PNIVEMYSSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIATVCLAVLKA 127 (285)
T ss_pred HHHHHcCC------------------CChheEEEEEEcCCeEEEEEeccCCCCHHHHHH--hCCCCHHHHHHHHHHHHHH
Confidence 33333321 121 1112222 456789999999999987643 34455555555555544
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|++|.||+++ .++.++|+|||++..+.
T Consensus 128 l~~lH~~~i~H~dl~p~Nil~~--~~~~~~l~d~g~~~~~~ 166 (285)
T cd06648 128 LSFLHAQGVIHRDIKSDSILLT--SDGRVKLSDFGFCAQVS 166 (285)
T ss_pred HHHHHhCCeecCCCChhhEEEc--CCCcEEEcccccchhhc
Confidence 7788999999999999999998 45899999999877553
No 327
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.19 E-value=7.9e-11 Score=122.32 Aligned_cols=138 Identities=17% Similarity=0.141 Sum_probs=90.4
Q ss_pred cccccceeeeeEEEEec------CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~------~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
+.||.|++|.||+|+.. .+..|++|+.+.+....- .-+
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~------------------------------------~~~ 49 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSE------------------------------------LRD 49 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHH------------------------------------HHH
Confidence 46899999999999853 235799998765432110 011
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH-----------
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 262 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~----------- 262 (666)
+.+|...+..+.+ + .+.+++. ....+++|||++|++|.++.....
T Consensus 50 ~~~E~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 109 (290)
T cd05045 50 LLSEFNLLKQVNH------------------P--HVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDG 109 (290)
T ss_pred HHHHHHHHhhCCC------------------C--CEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCcccccccccc
Confidence 3445444444322 2 2333332 456789999999999887632110
Q ss_pred ------------cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 263 ------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 263 ------------~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
..++...+...+.++. +..+|..|++|+|+||.||+++ .++.++|+|||++..+.
T Consensus 110 ~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~--~~~~~kl~dfg~~~~~~ 178 (290)
T cd05045 110 NRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVA--EGRKMKISDFGLSRDVY 178 (290)
T ss_pred ccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEc--CCCcEEecccccccccc
Confidence 1123334444444443 7889999999999999999998 45889999999987653
No 328
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.19 E-value=9.1e-11 Score=124.26 Aligned_cols=77 Identities=13% Similarity=0.101 Sum_probs=58.4
Q ss_pred cCCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~ 315 (666)
.+..++||||++|+++.++.... ..+++...+...+.++. +..+|..|++|+|+||.||+++. ++++++.|||..
T Consensus 71 ~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~--~~~~~l~~~~~~ 148 (327)
T cd08227 71 DNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV--DGKVYLSGLRSN 148 (327)
T ss_pred CCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEec--CCcEEEcccchh
Confidence 45668999999999998875322 22355555555555544 78899999999999999999984 588999999865
Q ss_pred cc
Q 005995 316 KK 317 (666)
Q Consensus 316 ~~ 317 (666)
..
T Consensus 149 ~~ 150 (327)
T cd08227 149 LS 150 (327)
T ss_pred hc
Confidence 44
No 329
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.19 E-value=6.1e-11 Score=121.32 Aligned_cols=141 Identities=14% Similarity=0.114 Sum_probs=91.7
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||+|+...+....... . ..-.+.+|.
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~-------------------------~-------~~~~~~~ei 55 (264)
T cd06653 8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETS-------------------------K-------EVNALECEI 55 (264)
T ss_pred eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhh-------------------------H-------HHHHHHHHH
Confidence 57999999999999975 79999999864322110000 0 001244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee------cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~ 276 (666)
..+.++++ + .+.+++. ....+++|||++|.+|.+.... ....+...+...+.+
T Consensus 56 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~~ 114 (264)
T cd06653 56 QLLKNLRH------------------D--RIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKA-YGALTENVTRRYTRQ 114 (264)
T ss_pred HHHHHcCC------------------C--CcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHH-cCCCCHHHHHHHHHH
Confidence 55555533 1 1222221 1235799999999998776431 122344443333333
Q ss_pred HH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 277 ~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+. +..+|..|++|+|++|+||+++ +++.++|+|||.+..+.
T Consensus 115 i~~al~~LH~~~i~H~dl~p~ni~i~--~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 115 ILQGVSYLHSNMIVHRDIKGANILRD--SAGNVKLGDFGASKRIQ 157 (264)
T ss_pred HHHHHHHHHhCCEecCCCCHHHEEEc--CCCCEEECccccccccc
Confidence 32 6788999999999999999998 45889999999988663
No 330
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.19 E-value=6.5e-11 Score=120.75 Aligned_cols=139 Identities=14% Similarity=0.160 Sum_probs=93.0
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.|+||+.+..... ..+. -.+..|.
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~---------------------------------~~~~~e~ 50 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKTI---------------------------------KEIADEM 50 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHHH---------------------------------HHHHHHH
Confidence 57999999999999865 7899999997654321 0000 0123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++++ ..+.+++. ....++||||++|.+|.++.... ...+...+...+.+++
T Consensus 51 ~~~~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~ 109 (264)
T cd06626 51 KVLELLKH--------------------PNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHG-RILDEHVIRVYTLQLL 109 (264)
T ss_pred HHHHhCCC--------------------CChhheeeeEecCCEEEEEEecCCCCcHHHHHhhc-CCCChHHHHHHHHHHH
Confidence 44444322 12223322 35568999999999998874321 1234444443333333
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|++|+||+++. ++.++|+|||.+..+..
T Consensus 110 ~~l~~lh~~~i~H~dl~~~nil~~~--~~~~kl~d~g~~~~~~~ 151 (264)
T cd06626 110 EGLAYLHSHGIVHRDIKPANIFLDH--NGVIKLGDFGCAVKLKN 151 (264)
T ss_pred HHHHHHHHCCcccCCCCHHHEEECC--CCCEEEcccccccccCC
Confidence 67889999999999999999984 58899999999887754
No 331
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.19 E-value=8.2e-11 Score=119.58 Aligned_cols=139 Identities=18% Similarity=0.131 Sum_probs=93.2
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCC-hHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~-~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
+.||.|++|+||.++.. +|+.|++|..... .... ..-++.+|
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~------------------------------------~~~~~~~e 49 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEK------------------------------------ERRDALNE 49 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccchh------------------------------------HHHHHHHH
Confidence 46999999999999864 7899999975321 1100 00113445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITR 276 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~l~~ 276 (666)
...+.++.+ ..+.+++ . ....+++|||++|++|.+..... ....+...+...+.+
T Consensus 50 ~~~l~~~~h--------------------~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 109 (256)
T cd08221 50 IVILSLLQH--------------------PNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQ 109 (256)
T ss_pred HHHHHhCCC--------------------CCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHH
Confidence 555555432 1233333 2 45568999999999998764322 122444555544444
Q ss_pred HH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 277 ~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
++ +..+|..|++|+|++|+||+++. ++.++|+|||.+.....
T Consensus 110 l~~~l~~lh~~~i~h~dl~p~ni~~~~--~~~~kl~d~~~~~~~~~ 153 (256)
T cd08221 110 IVSAVSYIHKAGILHRDIKTLNIFLTK--AGLIKLGDFGISKILGS 153 (256)
T ss_pred HHHHHHHHHhCCccccCCChHhEEEeC--CCCEEECcCcceEEccc
Confidence 33 67889999999999999999984 57899999999886644
No 332
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.19 E-value=1.1e-10 Score=120.16 Aligned_cols=140 Identities=17% Similarity=0.150 Sum_probs=94.6
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
..||+|++|.||+|+.. +|+.||+|+........ + .-++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~---------------------------------~~~~~~e~ 50 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAED---E---------------------------------IEDIQQEI 50 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccch---H---------------------------------HHHHHHHH
Confidence 46899999999999976 78999999864321000 0 00133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeee-eeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIP-EVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP-~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
+.+..+.+ +++.-+ ..+. ....++||||++|.+|.+... ....+...+...+.+++
T Consensus 51 ~~l~~l~h------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~~ 110 (274)
T cd06609 51 QFLSQCRS------------------PYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLK--PGKLDETYIAFILREVLLG 110 (274)
T ss_pred HHHHHcCC------------------CCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHh--hcCCCHHHHHHHHHHHHHH
Confidence 44444432 222111 1111 455689999999999987643 33455555555555544
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+..+|..|++|+|++|.||+++. ++.++|+|||++..+...
T Consensus 111 l~~lh~~~i~h~dl~p~ni~i~~--~~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 111 LEYLHEEGKIHRDIKAANILLSE--EGDVKLADFGVSGQLTST 151 (274)
T ss_pred HHHHHhCCcccCCCCHHHEEECC--CCCEEEcccccceeeccc
Confidence 66789999999999999999984 589999999999887643
No 333
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.19 E-value=1.3e-10 Score=120.76 Aligned_cols=141 Identities=20% Similarity=0.250 Sum_probs=91.7
Q ss_pred cccccceeeeeEEEEec------CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~------~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
+.||+|++|.||+|... +...||+|+.+.+...... .+
T Consensus 18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------------~~ 61 (293)
T cd05053 18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDL------------------------------------SD 61 (293)
T ss_pred eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHH------------------------------------HH
Confidence 58999999999999864 2367999987654321100 11
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-cCCCeeEeeecCCccCCChhhHH--------------
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-------------- 261 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~-------------- 261 (666)
+.+|...+.++.+ +++ +.+-..+. .+..+++|||++|++|.++....
T Consensus 62 ~~~E~~~l~~l~~-----------------h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 124 (293)
T cd05053 62 LVSEMEMMKMIGK-----------------HKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRP 124 (293)
T ss_pred HHHHHHHHHhhcC-----------------CCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccc
Confidence 3345544444321 111 22222222 45568999999999988764321
Q ss_pred -HcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 262 -AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 262 -~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
...++...+...+.++. +..+|..|++|+|++|.||+++ .++.++|+|||.+..+.
T Consensus 125 ~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~--~~~~~kL~Dfg~~~~~~ 183 (293)
T cd05053 125 PEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT--EDHVMKIADFGLARDIH 183 (293)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc--CCCeEEeCccccccccc
Confidence 01233344444444433 7788999999999999999998 45899999999988664
No 334
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.19 E-value=3.4e-11 Score=124.52 Aligned_cols=139 Identities=19% Similarity=0.231 Sum_probs=91.0
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+.+ +|+.||+|+......... ..-++.+|.
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~-----------------------------------~~~~~~~e~ 51 (286)
T cd07846 7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKM-----------------------------------VKKIAMREI 51 (286)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcch-----------------------------------hhHHHHHHH
Confidence 56999999999999976 689999997533211100 000122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++.+ ..+++++. ....++||||++|..+.++.. ...+++...+...+.++.
T Consensus 52 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~ 110 (286)
T cd07846 52 RMLKQLRH--------------------ENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEK-YPNGLDESRVRKYLFQIL 110 (286)
T ss_pred HHHHhcCC--------------------cchhhHHHhcccCCeEEEEEecCCccHHHHHHh-ccCCCCHHHHHHHHHHHH
Confidence 33333221 12222221 344689999999988776532 122355555555555544
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|++|+||+++ .++.++|+|||++..+..
T Consensus 111 ~~l~~LH~~~i~h~~l~p~ni~~~--~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 111 RGIEFCHSHNIIHRDIKPENILVS--QSGVVKLCDFGFARTLAA 152 (286)
T ss_pred HHHHHHHHCCccccCCCHHHEEEC--CCCcEEEEeeeeeeeccC
Confidence 6788999999999999999998 458999999999887643
No 335
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.18 E-value=5.4e-11 Score=124.78 Aligned_cols=142 Identities=15% Similarity=0.104 Sum_probs=91.5
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||.|++|.||+|+.. +|+.||+|+.+...... .....+.+|.
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~~E~ 57 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-----------------------------------GIPISSLREI 57 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-----------------------------------CCcchhhHHH
Confidence 46999999999999975 79999999875432100 0011123355
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-c--CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
..+.++++. .-+.+...+. . +..++||||++| +|.++.......++...+...+.+++
T Consensus 58 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~ 119 (309)
T cd07845 58 TLLLNLRHP-----------------NIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLR 119 (309)
T ss_pred HHHHhCCCC-----------------CCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 555544321 1122233332 1 345899999986 55444322223344455444444443
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|++|+||+++ .++.++|+|||++..+..
T Consensus 120 ~l~~lH~~~i~H~dl~p~nil~~--~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 120 GLQYLHENFIIHRDLKVSNLLLT--DKGCLKIADFGLARTYGL 160 (309)
T ss_pred HHHHHHhCCeecCCCCHHHEEEC--CCCCEEECccceeeecCC
Confidence 7789999999999999999998 458999999999887643
No 336
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=99.18 E-value=5.1e-10 Score=114.23 Aligned_cols=202 Identities=16% Similarity=0.209 Sum_probs=137.6
Q ss_pred HHHHHHhCCChhccccccCccccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhh--CCCCCh
Q 005995 104 QTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWA--EPQYDF 181 (666)
Q Consensus 104 ~~l~~~~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~--~~~~~~ 181 (666)
.+|.+-+.. .++.+++ -.|..|--+.||.|+-.+|..+||||.+..|--.-.+|- .+..-+.+. ....++
T Consensus 134 mvLfrll~R---G~i~~in-GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdR----YV~GEfRFRhgyck~NP 205 (520)
T KOG2270|consen 134 MVLFRLLNR---GVIVEIN-GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDR----YVSGEFRFRHGYCKHNP 205 (520)
T ss_pred HHHHHHHhc---Ceeeecc-cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhh----hccceeeeecccccCCc
Confidence 344554433 2455555 489999999999999999999999998866542222221 111101111 112367
Q ss_pred HHHHHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHH
Q 005995 182 NPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE 261 (666)
Q Consensus 182 ~~~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~ 261 (666)
..++.-|.+. |.+|+.++.. .++++|+|+.-..+||||+|+.+... ....+.
T Consensus 206 RKMVk~WAEK---------E~RNLkRl~~------------------aGIP~PePIlLk~hVLVM~FlGrdgw-~aPkLK 257 (520)
T KOG2270|consen 206 RKMVKTWAEK---------EMRNLKRLNN------------------AGIPCPEPILLKNHVLVMEFLGRDGW-AAPKLK 257 (520)
T ss_pred HHHHHHHHHH---------HHHHHHHHHh------------------cCCCCCCceeeecceEeeeeccCCCC-cCcccc
Confidence 7788887764 8899999976 36889999988889999999964222 112233
Q ss_pred HcCCCHHH---HHHHHHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCH
Q 005995 262 AFGVNKQK---VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDH 338 (666)
Q Consensus 262 ~~~~~~~~---~~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~~~l~~a~~~~d~ 338 (666)
...+...+ +-..++..+-.....+++||+||.--|+|+- +|++.+||-+.+.+.+...-..+ +..|.
T Consensus 258 d~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyh---dG~lyiIDVSQSVE~DHP~aldF-------LRmDc 327 (520)
T KOG2270|consen 258 DASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYH---DGKLYIIDVSQSVEHDHPHALDF-------LRMDC 327 (520)
T ss_pred cccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEE---CCEEEEEEccccccCCChhHHHH-------HHHHH
Confidence 33344333 3333444333334468999999999999996 58999999999998887765554 56688
Q ss_pred HHHHHHHHHcCCc
Q 005995 339 VALLSAFAEMGLR 351 (666)
Q Consensus 339 ~~~~~~~~~~g~~ 351 (666)
..+-..|.++|..
T Consensus 328 ~NVn~FF~r~gv~ 340 (520)
T KOG2270|consen 328 NNVNDFFRRLGVA 340 (520)
T ss_pred HHHHHHHHHcCCe
Confidence 8899999999985
No 337
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.18 E-value=1e-10 Score=124.24 Aligned_cols=79 Identities=14% Similarity=0.167 Sum_probs=57.0
Q ss_pred cCCCeeEeeecCCccCCChhhHHH---------------cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEee
Q 005995 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~---------------~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~ 301 (666)
....+++|||++|++|.++..... ..++...+...+.++. +..+|..|++|+|++|.||+++
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~- 168 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVT- 168 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc-
Confidence 345689999999999887643211 1123333333333333 6788999999999999999998
Q ss_pred CCCCceEEEecccccccC
Q 005995 302 DPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 302 ~~~~~i~liDFG~~~~l~ 319 (666)
.++.++|+|||.++.+.
T Consensus 169 -~~~~~kL~Dfg~~~~~~ 185 (334)
T cd05100 169 -EDNVMKIADFGLARDVH 185 (334)
T ss_pred -CCCcEEECCcccceecc
Confidence 45889999999987664
No 338
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.18 E-value=1e-10 Score=120.37 Aligned_cols=138 Identities=16% Similarity=0.190 Sum_probs=92.0
Q ss_pred cccccceeeeeEEEEec------CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~------~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
+.||+|++|.||+|..+ ++..||+|....+.... ....
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~------------------------------------~~~~ 55 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMR------------------------------------ERIE 55 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHH------------------------------------HHHH
Confidence 56999999999999875 24689999865432110 0112
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHc---------C
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF---------G 264 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~---------~ 264 (666)
+.+|...+..+.+ ..+.+++. ....++||||++|++|.+....... .
T Consensus 56 ~~~e~~~l~~~~~--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 115 (277)
T cd05032 56 FLNEASVMKEFNC--------------------HHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGP 115 (277)
T ss_pred HHHHHHHHHhCCC--------------------CceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCC
Confidence 4445555544322 12334442 4567999999999999876432110 1
Q ss_pred CCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 265 ~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.+...+...+.++. +..+|..|++|+|++|.||+++ .++.++|+|||+++.+.
T Consensus 116 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~--~~~~~kl~dfg~~~~~~ 170 (277)
T cd05032 116 PTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA--EDLTVKIGDFGMTRDIY 170 (277)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEc--CCCCEEECCcccchhhc
Confidence 23334444444443 6788999999999999999998 45899999999987653
No 339
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.18 E-value=1.6e-10 Score=118.92 Aligned_cols=137 Identities=19% Similarity=0.182 Sum_probs=91.9
Q ss_pred cccccceeeeeEEEEec------CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~------~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
+-+|.|++|.||+|+.+ +.+.|++|+....-.... .. +
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~--------------------------~~----------~ 54 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENL--------------------------QS----------E 54 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHH--------------------------HH----------H
Confidence 35899999999999964 346799997543211100 00 1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHc--------CC
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF--------GV 265 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~--------~~ 265 (666)
+.+|++.+.++.+ ..+++++. ....++||||++|++|.++...... .+
T Consensus 55 ~~~E~~~l~~l~h--------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l 114 (275)
T cd05046 55 FRRELDMFRKLSH--------------------KNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPL 114 (275)
T ss_pred HHHHHHHHHhcCC--------------------cceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCC
Confidence 4456666665533 22334442 3457999999999999877432221 24
Q ss_pred CHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 266 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 266 ~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+...+...+.++. +..+|..|++|+|++|.||+++. ++.+++.|||++...
T Consensus 115 ~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~--~~~~~l~~~~~~~~~ 167 (275)
T cd05046 115 STKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSS--QREVKVSLLSLSKDV 167 (275)
T ss_pred CHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeC--CCcEEEccccccccc
Confidence 4444444444443 78899999999999999999984 578999999997654
No 340
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.18 E-value=1.1e-10 Score=121.06 Aligned_cols=140 Identities=15% Similarity=0.158 Sum_probs=92.1
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||.|++|.||+|... +++.||+|+........ .+-++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~------------------------------------~~~~~~~e~ 50 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPD------------------------------------LQKQILREL 50 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCchH------------------------------------HHHHHHHHH
Confidence 57999999999999985 68999999876432211 011134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcce-eeeeeee---cCCCeeEeeecCCccCCChhhH-H--HcCCCHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ---SSETVLILEFMDGIRLNDCESL-E--AFGVNKQKVVEEIT 275 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vP~~~~---~~~~vLvmE~i~G~~L~~~~~~-~--~~~~~~~~~~~~l~ 275 (666)
+.+.++.+ +++ .+...+. ....+|||||++|.+|.+.... . ...++...+...+.
T Consensus 51 ~~l~~l~h------------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~ 112 (287)
T cd06621 51 EINKSCKS------------------PYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAE 112 (287)
T ss_pred HHHHhCCC------------------CCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 55555432 221 1212222 2345899999999999775332 1 11233344444444
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+++ +..+|..|++|+|++|.||+++. ++.++|+|||++..+.
T Consensus 113 ~i~~~L~~lH~~~i~H~dl~~~nil~~~--~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 113 SVLKGLSYLHSRKIIHRDIKPSNILLTR--KGQVKLCDFGVSGELV 156 (287)
T ss_pred HHHHHHHHHHHCCcccCCCCHHHEEEec--CCeEEEeecccccccc
Confidence 433 66889999999999999999984 5789999999987654
No 341
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.18 E-value=1.1e-10 Score=121.43 Aligned_cols=137 Identities=18% Similarity=0.181 Sum_probs=91.1
Q ss_pred cccccceeeeeEEEEec------CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~------~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
..||.|++|.||+|... ++..|++|..+...... +-.
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~-------------------------------------~~~ 53 (291)
T cd05094 11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAA-------------------------------------RKD 53 (291)
T ss_pred eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHH-------------------------------------HHH
Confidence 57999999999999742 45678999765432110 111
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH-----------
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 262 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~----------- 262 (666)
+.+|...+.++++ ..+.+++. ....++||||++|.+|.++.....
T Consensus 54 ~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~ 113 (291)
T cd05094 54 FQREAELLTNLQH--------------------EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQP 113 (291)
T ss_pred HHHHHHHHhcCCC--------------------CCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCccccccccccc
Confidence 4445555554432 22333332 455799999999999988743211
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 263 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 263 ----~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
..++...+...+.++. +..+|..|++|+|+||.||+++ .++.++|+|||++....
T Consensus 114 ~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~--~~~~~~l~dfg~a~~~~ 174 (291)
T cd05094 114 RQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG--ANLLVKIGDFGMSRDVY 174 (291)
T ss_pred ccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc--cCCcEEECCCCcccccC
Confidence 1123344444444433 6788999999999999999998 45899999999987653
No 342
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.18 E-value=3.7e-11 Score=124.22 Aligned_cols=138 Identities=16% Similarity=0.167 Sum_probs=89.6
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
++||+|++|+||+|+.. +|+.||||+.+....... .+-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-----------------------------------~~~~~~~E~ 50 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-----------------------------------VPSTAIREI 50 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEccccccccc-----------------------------------cchHHHHHH
Confidence 57999999999999875 799999997653221000 001133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRA 277 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~l~~~ 277 (666)
+.+.++++ ..+.+++ . ....++||||+.+ ++.+..... ...++...+...+.++
T Consensus 51 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i 109 (284)
T cd07860 51 SLLKELNH--------------------PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQL 109 (284)
T ss_pred HHHHhcCC--------------------CCCcchhhhcccCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 55555432 1122222 1 3456899999975 554442211 1234555555544444
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
. +..+|..|++|+|++|+||+++ .++.++|+|||++..+.
T Consensus 110 ~~~l~~lh~~~i~H~~l~p~nill~--~~~~~~l~dfg~~~~~~ 151 (284)
T cd07860 110 LQGLAFCHSHRVLHRDLKPQNLLIN--TEGAIKLADFGLARAFG 151 (284)
T ss_pred HHHHHHHHHCCeecCCCCHHHEEEC--CCCCEEEeeccchhhcc
Confidence 3 6788999999999999999998 45899999999887553
No 343
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.17 E-value=9.6e-11 Score=118.65 Aligned_cols=142 Identities=17% Similarity=0.208 Sum_probs=94.9
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|... +|+.||+|+........ .+ . -.+..|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~---------------------------~------~~~~~e~ 50 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSE--KE---------------------------R------EDALNEV 50 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCCh--HH---------------------------H------HHHHHHH
Confidence 56999999999999975 68999999875422110 00 0 0122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcce-eeeeeee-cCCCeeEeeecCCccCCChhhHHH---cCCCHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRA 277 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~---~~~~~~~~~~~l~~~ 277 (666)
+.+..+++ +++ .+...+. ....+++|||++|.+|.+...... ..++...+...+.++
T Consensus 51 ~~l~~l~~------------------~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i 112 (258)
T cd08215 51 KILKKLNH------------------PNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQL 112 (258)
T ss_pred HHHHhcCC------------------CChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHH
Confidence 44443321 111 1111121 456689999999999987643321 345566666665555
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+ +..+|..|++|+|++|.||+++ +++.++|+|||.+.....
T Consensus 113 ~~~l~~lh~~~~~H~dl~~~nil~~--~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 113 CLALKYLHSRKILHRDIKPQNIFLT--SNGLVKLGDFGISKVLSS 155 (258)
T ss_pred HHHHHHHHhCCEecccCChHHeEEc--CCCcEEECCccceeeccc
Confidence 4 7889999999999999999998 458899999999887654
No 344
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.17 E-value=1.1e-10 Score=124.76 Aligned_cols=139 Identities=20% Similarity=0.239 Sum_probs=88.8
Q ss_pred cccccceeeeeEEEEe-cCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l-~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
++||+|++|.||+|.. .+|+.||||+.......... +-.+.+|.
T Consensus 23 ~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------------------~~~~~~Ei 67 (345)
T cd07877 23 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-----------------------------------AKRTYREL 67 (345)
T ss_pred EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHH-----------------------------------HHHHHHHH
Confidence 6899999999999986 47999999987653211100 00133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-------cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~ 275 (666)
..+.++++.. -+.+..++. ....+++++++ |.+|.++. ....++...+...+.
T Consensus 68 ~~l~~l~h~~-----------------iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~--~~~~l~~~~~~~i~~ 127 (345)
T cd07877 68 RLLKHMKHEN-----------------VIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV--KCQKLTDDHVQFLIY 127 (345)
T ss_pred HHHHHcCCCc-----------------ccceeeeeeecccccccccEEEEehhc-ccCHHHHH--hcCCCCHHHHHHHHH
Confidence 5555554310 011122221 12347888887 65665542 223345444444444
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
++. +..+|..|++|+|+||+||+++ .++.++|+|||++....
T Consensus 128 qi~~aL~~LH~~~ivH~dlkp~NIll~--~~~~~kl~dfg~~~~~~ 171 (345)
T cd07877 128 QILRGLKYIHSADIIHRDLKPSNLAVN--EDCELKILDFGLARHTD 171 (345)
T ss_pred HHHHHHHHHHHCCeeecCCChHHEEEc--CCCCEEEeccccccccc
Confidence 433 6788999999999999999998 45899999999987653
No 345
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.17 E-value=1.5e-10 Score=127.98 Aligned_cols=77 Identities=17% Similarity=0.214 Sum_probs=54.0
Q ss_pred CCCeeEeeecCCccCCChhhHHHc-----------------------CCCHHHHHHHHHHH--HHHHhhhcCccccCCCc
Q 005995 240 SETVLILEFMDGIRLNDCESLEAF-----------------------GVNKQKVVEEITRA--YAHQIYVDGFFNGDPHP 294 (666)
Q Consensus 240 ~~~vLvmE~i~G~~L~~~~~~~~~-----------------------~~~~~~~~~~l~~~--~l~~i~~~g~~H~D~hP 294 (666)
...+|||||++|.+|.++...... ..+...+...+.++ .+..+|..|++|+|+||
T Consensus 258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp 337 (507)
T PLN03224 258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP 337 (507)
T ss_pred CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence 456899999999999776431100 01112222222232 26778999999999999
Q ss_pred CceEEeeCCCCceEEEeccccccc
Q 005995 295 GNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 295 gNilv~~~~~~~i~liDFG~~~~l 318 (666)
+|||++. ++.++|+|||++..+
T Consensus 338 ~NILl~~--~~~~kL~DFGla~~~ 359 (507)
T PLN03224 338 ENLLVTV--DGQVKIIDFGAAVDM 359 (507)
T ss_pred HhEEECC--CCcEEEEeCcCcccc
Confidence 9999984 588999999998654
No 346
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.17 E-value=8.9e-11 Score=119.12 Aligned_cols=140 Identities=18% Similarity=0.210 Sum_probs=93.2
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCCh-HHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~-~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
+.||.|++|.||+|... +++.||||+..... .... .-.+.+|
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~~e 49 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDE------------------------------------RLAAQNE 49 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccccccHH------------------------------------HHHHHHH
Confidence 57999999999999875 78999999865321 1000 0013345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITR 276 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~ 276 (666)
++.+.++.+ + .++.++ . ....++||||++|.+|.++..... ...+...+...+.+
T Consensus 50 ~~~l~~~~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 109 (256)
T cd08220 50 CQVLKLLSH------------------P--NIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQ 109 (256)
T ss_pred HHHHhhCCC------------------C--chhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHH
Confidence 555444422 1 122222 1 445689999999999988754321 22455555554444
Q ss_pred HH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 277 ~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
++ +..+|..|++|+|++|+||+++.+ ++.++|+|||++..+..
T Consensus 110 i~~~l~~lh~~~i~h~dl~~~nil~~~~-~~~~~l~d~~~~~~~~~ 154 (256)
T cd08220 110 ILLALHHVHTKLILHRDLKTQNILLDKH-KMVVKIGDFGISKILSS 154 (256)
T ss_pred HHHHHHHHHhCCeecCCCCHHHEEEcCC-CCEEEEccCCCceecCC
Confidence 43 678899999999999999999843 45679999999987754
No 347
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.17 E-value=7e-11 Score=122.01 Aligned_cols=142 Identities=15% Similarity=0.206 Sum_probs=92.5
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|+||+|+.. +|+.||||+.+...... + ...++.+|.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~-----------------------------~------~~~~~~~e~ 49 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKE-----------------------------G------FPITAIREI 49 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecccccc-----------------------------c------chHHHHHHH
Confidence 46899999999999976 68999999987543100 0 001233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-c--CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++.+ ++ +.+..++. . ...++||||+++ +|.+........++...+...+.++.
T Consensus 50 ~~l~~l~~------------------~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~ 110 (287)
T cd07840 50 KLLQKLRH------------------PNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLL 110 (287)
T ss_pred HHHHhccC------------------CCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHH
Confidence 55555432 11 11222222 2 467899999986 55544221112345555444444433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+..+|..|++|+|++|+||+++ .++.++|+|||++..+...
T Consensus 111 ~al~~LH~~~~~h~dl~p~nil~~--~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 111 EGLQYLHSNGILHRDIKGSNILIN--NDGVLKLADFGLARPYTKR 153 (287)
T ss_pred HHHHHHHHCCceeccCcHHHeEEc--CCCCEEEccccceeeccCC
Confidence 6788999999999999999999 4589999999999877543
No 348
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.16 E-value=1e-10 Score=121.86 Aligned_cols=136 Identities=15% Similarity=0.176 Sum_probs=90.8
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.+|+|++|.||+|... +|+.||+|+....-... .-.+.+|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~-------------------------------------~~~~~~e~ 67 (293)
T cd06647 25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPK-------------------------------------KELIINEI 67 (293)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeccccchH-------------------------------------HHHHHHHH
Confidence 57999999999999864 78999999753211000 00122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++++ + .++.++ . ....++||||++|++|.++. .....+...+...+.+++
T Consensus 68 ~~l~~l~h------------------p--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~i~~~l~ 125 (293)
T cd06647 68 LVMRENKH------------------P--NIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECL 125 (293)
T ss_pred HHHhhcCC------------------C--CeeehhheeeeCCcEEEEEecCCCCcHHHHH--hhcCCCHHHHHHHHHHHH
Confidence 33333221 1 222222 1 45678999999999988763 333445545444444433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+..+|..|++|+|++|+||+++. ++.++|+|||++..+..
T Consensus 126 ~al~~LH~~gi~H~dL~p~Nili~~--~~~~kL~dfg~~~~~~~ 167 (293)
T cd06647 126 QALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFCAQITP 167 (293)
T ss_pred HHHHHHHhCCEeeccCCHHHEEEcC--CCCEEEccCcceecccc
Confidence 67889999999999999999984 58899999998876654
No 349
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.16 E-value=1.6e-10 Score=120.00 Aligned_cols=79 Identities=15% Similarity=0.217 Sum_probs=59.1
Q ss_pred cCCCeeEeeecCCccCCChhhHHH------------cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCC
Q 005995 239 SSETVLILEFMDGIRLNDCESLEA------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP 304 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~------------~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~ 304 (666)
....+++|||++|.+|.++..... ..++...+...+.++. +..+|..|++|+|++|.||+++ ++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~--~~ 156 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG--EN 156 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc--cC
Confidence 456799999999999877643111 1244445555444443 6788999999999999999998 45
Q ss_pred CceEEEecccccccC
Q 005995 305 HRPILLDFGLTKKLS 319 (666)
Q Consensus 305 ~~i~liDFG~~~~l~ 319 (666)
+.++|+|||++..+.
T Consensus 157 ~~~kl~dfg~~~~~~ 171 (288)
T cd05093 157 LLVKIGDFGMSRDVY 171 (288)
T ss_pred CcEEeccCCcccccc
Confidence 889999999987653
No 350
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.16 E-value=4.2e-11 Score=122.12 Aligned_cols=81 Identities=16% Similarity=0.149 Sum_probs=57.8
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCC------CceEEE
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP------HRPILL 310 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~------~~i~li 310 (666)
....++||||++|++|.++.......++.......+.++. +..+|..|++|+|+||.||+++.++. +.++++
T Consensus 71 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~ 150 (258)
T cd05078 71 GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLS 150 (258)
T ss_pred CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEec
Confidence 3567899999999999877432222345444444444433 67889999999999999999985421 126899
Q ss_pred ecccccccC
Q 005995 311 DFGLTKKLS 319 (666)
Q Consensus 311 DFG~~~~l~ 319 (666)
|||.+....
T Consensus 151 d~g~~~~~~ 159 (258)
T cd05078 151 DPGISITVL 159 (258)
T ss_pred ccccccccC
Confidence 999876553
No 351
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.16 E-value=1.6e-10 Score=121.36 Aligned_cols=155 Identities=18% Similarity=0.178 Sum_probs=97.2
Q ss_pred hCCChhccccccCccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHH
Q 005995 110 FGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEW 188 (666)
Q Consensus 110 ~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 188 (666)
+....++.|... ..+|.|++|+||+|+.. +|+.||||..+..-.... .
T Consensus 9 ~~~~~~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~------------------------~----- 57 (308)
T cd06634 9 FKDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN------------------------E----- 57 (308)
T ss_pred hcCCcHHHHHHH--HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccCh------------------------H-----
Confidence 344455555543 56999999999999975 788999997653211000 0
Q ss_pred HHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCH
Q 005995 189 CKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK 267 (666)
Q Consensus 189 ~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~ 267 (666)
..-++..|.+.+..+.+. .-+.+...+. ....++||||+.| ++.+........++.
T Consensus 58 -----~~~~~~~e~~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~ 114 (308)
T cd06634 58 -----KWQDIIKEVRFLQKLRHP-----------------NTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQE 114 (308)
T ss_pred -----HHHHHHHHHHHHHhCCCC-----------------CcccEEEEEEcCCeeEEEEEccCC-CHHHHHHHcCCCCCH
Confidence 001133455554444321 0111222222 4566899999986 555543333334555
Q ss_pred HHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 268 ~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
..+...+.+++ +..+|..|++|+|++|.||+++ .++.++|+|||++..+..
T Consensus 115 ~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~--~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 115 VEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS--EPGLVKLGDFGSASIMAP 167 (308)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEEC--CCCcEEECCcccceeecC
Confidence 55555444443 6788999999999999999998 458999999999876543
No 352
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.16 E-value=9.1e-11 Score=122.04 Aligned_cols=138 Identities=14% Similarity=0.156 Sum_probs=87.1
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||.|++|.||+|+.. +|+.||||..+...... + ..-.+.+|+
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----------------------------~------~~~~~~~e~ 52 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE-----------------------------G------VPSTAIREI 52 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhccccc-----------------------------c------chHHHHHHH
Confidence 46899999999999975 79999999754321100 0 001134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~ 277 (666)
+.+.++.+ ..+++++. ....++||||++| ++.+...... ...+...+...+.++
T Consensus 53 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi 111 (294)
T PLN00009 53 SLLKEMQH--------------------GNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQI 111 (294)
T ss_pred HHHHhccC--------------------CCEeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHH
Confidence 55555432 22444442 4556899999976 4444321111 112333333333333
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
+ +..+|..|++|+|++|.||+++.+ ++.++|+|||++..+
T Consensus 112 ~~aL~~LH~~~i~H~dl~p~nill~~~-~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 112 LRGIAYCHSHRVLHRDLKPQNLLIDRR-TNALKLADFGLARAF 153 (294)
T ss_pred HHHHHHHHhCCeeCCCCCcceEEEECC-CCEEEEccccccccc
Confidence 2 678899999999999999999853 467999999998765
No 353
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.16 E-value=1.2e-10 Score=115.25 Aligned_cols=140 Identities=19% Similarity=0.193 Sum_probs=95.0
Q ss_pred cccccceeeeeEEEEecC-CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLVD-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~-g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
++||+|++|+||+|+..+ ++.|+||+.+...... . .-++..|.
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---~---------------------------------~~~~~~e~ 48 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEK---Q---------------------------------REEFLREI 48 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccchH---H---------------------------------HHHHHHHH
Confidence 579999999999999874 8999999987643220 0 00133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
+.+.++++ ..+++++. ....+++|||++|.+|.++........+...+...+.++.
T Consensus 49 ~~~~~~~~--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~ 108 (225)
T smart00221 49 RILKKLKH--------------------PNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQIL 108 (225)
T ss_pred HHHHhCCC--------------------CChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHH
Confidence 44444321 12222221 4567899999999988876432221145444444444433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+..+|..|++|+|++|.||+++. ++.++|+|||.+..+...
T Consensus 109 ~~l~~lh~~~i~h~di~~~ni~v~~--~~~~~l~d~g~~~~~~~~ 151 (225)
T smart00221 109 EALEYLHSLGIVHRDLKPENILLGM--DGLVKLADFGLARFIHRD 151 (225)
T ss_pred HHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEeeCceeeEecCc
Confidence 67889999999999999999984 589999999998887544
No 354
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.15 E-value=1.8e-10 Score=118.30 Aligned_cols=79 Identities=22% Similarity=0.278 Sum_probs=61.2
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCC-ceEEEecccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH-RPILLDFGLT 315 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~-~i~liDFG~~ 315 (666)
....++||||++|++|.+..... ..++...+...+.++. +..+|..|++|+|++|.||+++.+ + +++|+|||++
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~--~~~~~l~dfg~~ 157 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRA--KDRIYLCDYGLC 157 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCC--CCeEEEecCccc
Confidence 45679999999999998764322 2456666655555554 788999999999999999999853 5 8999999998
Q ss_pred cccCH
Q 005995 316 KKLSS 320 (666)
Q Consensus 316 ~~l~~ 320 (666)
..++.
T Consensus 158 ~~~~~ 162 (267)
T PHA03390 158 KIIGT 162 (267)
T ss_pred eecCC
Confidence 77653
No 355
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.15 E-value=1.6e-10 Score=116.81 Aligned_cols=78 Identities=27% Similarity=0.271 Sum_probs=58.8
Q ss_pred CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 240 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
...+++|||++|.+|.+..... ..++...+...+.+++ +..+|..|++|+|++|.||+++. ++.++|+|||++..
T Consensus 66 ~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~--~~~~~l~d~~~~~~ 142 (250)
T cd05123 66 EKLYLVLEYAPGGELFSHLSKE-GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDA--DGHIKLTDFGLAKE 142 (250)
T ss_pred CeeEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcC--CCcEEEeecCccee
Confidence 4458999999998887764321 2345555555444443 67889999999999999999984 58899999999877
Q ss_pred cCH
Q 005995 318 LSS 320 (666)
Q Consensus 318 l~~ 320 (666)
...
T Consensus 143 ~~~ 145 (250)
T cd05123 143 LSS 145 (250)
T ss_pred ccc
Confidence 643
No 356
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.15 E-value=7.2e-11 Score=123.20 Aligned_cols=141 Identities=17% Similarity=0.192 Sum_probs=89.7
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.+|+|++|+||+|+.+ +|+.||||+.+......- .+.++.+|.
T Consensus 13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~-----------------------------------~~~~~~~e~ 57 (302)
T cd07864 13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEG-----------------------------------FPITAIREI 57 (302)
T ss_pred eeecccCCEEEEEEEECCCCcEEEEEEEeecccccC-----------------------------------chHHHHHHH
Confidence 57999999999999986 689999998764321100 011133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCccee-eeeeee-----------cCCCeeEeeecCCccCCChhhHHHcCCCHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVL-IPEVIQ-----------SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 270 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~-vP~~~~-----------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~ 270 (666)
+.+.++++ +++. +...+. .+..+|||||++| .+.+........++...+
T Consensus 58 ~~~~~l~h------------------~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~ 118 (302)
T cd07864 58 KILRQLNH------------------RNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHI 118 (302)
T ss_pred HHHHhCCC------------------CCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHH
Confidence 44444432 1111 111111 1245799999998 333322111123455555
Q ss_pred HHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 271 ~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
...+.+++ +..+|..|++|+|+||+||+++ .++.++|+|||.+..+..
T Consensus 119 ~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~--~~~~~kl~dfg~~~~~~~ 168 (302)
T cd07864 119 KSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN--NKGQIKLADFGLARLYNS 168 (302)
T ss_pred HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC--CCCcEEeCcccccccccC
Confidence 55555544 7788999999999999999998 458999999999887654
No 357
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.14 E-value=9.9e-11 Score=119.89 Aligned_cols=81 Identities=19% Similarity=0.177 Sum_probs=57.5
Q ss_pred cCCCeeEeeecCCccCCChhhHHH------cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCC---CCce
Q 005995 239 SSETVLILEFMDGIRLNDCESLEA------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP---PHRP 307 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~------~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~---~~~i 307 (666)
....+++|||++|++|.+...-.. ...+...+...+.++. +..+|..|++|+|++|.||+++.+. ...+
T Consensus 71 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~ 150 (269)
T cd05044 71 NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVV 150 (269)
T ss_pred CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcce
Confidence 455789999999999887643211 1133344444444433 6788999999999999999998531 1279
Q ss_pred EEEecccccccC
Q 005995 308 ILLDFGLTKKLS 319 (666)
Q Consensus 308 ~liDFG~~~~l~ 319 (666)
+|+|||++..+.
T Consensus 151 ~l~dfg~~~~~~ 162 (269)
T cd05044 151 KIGDFGLARDIY 162 (269)
T ss_pred EECCcccccccc
Confidence 999999987664
No 358
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.14 E-value=4.2e-11 Score=129.62 Aligned_cols=139 Identities=19% Similarity=0.213 Sum_probs=98.6
Q ss_pred ccccceeeeeEEEEec--CCC--EEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHH
Q 005995 125 PLATASIAQVHRATLV--DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~--~g~--~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 200 (666)
-||+||||.|++|.+. +|+ .||||+++++...... -||++
T Consensus 117 ~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~m------------------------------------ddflr 160 (1039)
T KOG0199|consen 117 LLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIM------------------------------------DDFLR 160 (1039)
T ss_pred HhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhH------------------------------------HHHHH
Confidence 4899999999999975 565 6899999987654311 14888
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---cCCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHHHHH
Q 005995 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITR 276 (666)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~l~~ 276 (666)
|+..+-+++| .++-++|. .-...+|||.+++++|-+...-. ...+-...+..-+.+
T Consensus 161 Eas~M~~L~H--------------------~hliRLyGvVl~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~Q 220 (1039)
T KOG0199|consen 161 EASHMLKLQH--------------------PHLIRLYGVVLDQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQ 220 (1039)
T ss_pred HHHHHHhccC--------------------cceeEEeeeeccchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHH
Confidence 9999888765 33445554 44557999999999997764321 111222334444444
Q ss_pred HH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 277 ~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+. +..+-..++||||+-..|+++-. ...++|+|||+++.+...
T Consensus 221 iA~aM~YLeskrlvHRDLAARNlllas--prtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 221 IAKAMQYLESKRLVHRDLAARNLLLAS--PRTVKICDFGLMRALGEN 265 (1039)
T ss_pred HHHHHHHHhhhhhhhhhhhhhhheecc--cceeeeecccceeccCCC
Confidence 33 34444589999999999999984 467999999999998654
No 359
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.14 E-value=9.6e-11 Score=124.45 Aligned_cols=151 Identities=13% Similarity=0.133 Sum_probs=93.1
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.. +|+.||||+.+........... .........+.++.+|.
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~E~ 71 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKD-----------------------RQLVGMCGIHFTTLREL 71 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccc-----------------------hhhhcccccchhHHHHH
Confidence 47999999999999965 7999999987543211100000 00000000112344565
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~-- 278 (666)
+.+.++.+ ++ +.+...+. ....++||||++| +|.+... ....++...+...+.+++
T Consensus 72 ~~l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~-~~~~~~~~~~~~~~~ql~~a 131 (335)
T PTZ00024 72 KIMNEIKH------------------ENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVD-RKIRLTESQVKCILLQILNG 131 (335)
T ss_pred HHHHhCCC------------------cceeeeeEEEecCCcEEEEEecccc-CHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 55555432 11 11222222 4556899999986 5554432 122345555555555544
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|++|+||+++ .++.++|+|||++..+.
T Consensus 132 L~~LH~~~i~H~dl~~~nill~--~~~~~kl~dfg~~~~~~ 170 (335)
T PTZ00024 132 LNVLHKWYFMHRDLSPANIFIN--SKGICKIADFGLARRYG 170 (335)
T ss_pred HHHHHhCCeecccccHHHeEEC--CCCCEEECCccceeecc
Confidence 7788999999999999999998 45889999999988664
No 360
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.14 E-value=8.7e-11 Score=114.47 Aligned_cols=79 Identities=22% Similarity=0.379 Sum_probs=49.4
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHHHHhh----hcCccccCCCcCceEEeeCCCCceEEEeccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY----VDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 314 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l~~i~----~~g~~H~D~hPgNilv~~~~~~~i~liDFG~ 314 (666)
.++..+.||.+.- -++.+... -.+.-+++++..+.-+....++ .||++|||+||+|||+++ .|.|+|+|||+
T Consensus 163 n~dV~IcMelMs~-C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe--~GniKlCDFGI 238 (391)
T KOG0983|consen 163 NTDVFICMELMST-CAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE--RGNIKLCDFGI 238 (391)
T ss_pred CchHHHHHHHHHH-HHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEcc--CCCEEeecccc
Confidence 4555677887632 12222111 1122234444444333322222 489999999999999994 59999999999
Q ss_pred ccccCHH
Q 005995 315 TKKLSSS 321 (666)
Q Consensus 315 ~~~l~~~ 321 (666)
++++.+.
T Consensus 239 sGrlvdS 245 (391)
T KOG0983|consen 239 SGRLVDS 245 (391)
T ss_pred cceeecc
Confidence 9998654
No 361
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.14 E-value=9e-11 Score=121.25 Aligned_cols=138 Identities=16% Similarity=0.177 Sum_probs=89.9
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||.|++|+||+|+.. +|+.||||+.+.+....- ..-++.+|.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~-----------------------------------~~~~~~~E~ 49 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEG-----------------------------------VPSTAIREI 49 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeeccccccc-----------------------------------chhHHHHHH
Confidence 46899999999999965 899999998754321100 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~ 277 (666)
..+.++++ ..+++++ . ....+++|||+++ +|.+...... ..++...+...+.++
T Consensus 50 ~~l~~l~~--------------------~~iv~~~~~~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i 108 (283)
T cd07835 50 SLLKELNH--------------------PNIVRLLDVVHSENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQL 108 (283)
T ss_pred HHHHhcCC--------------------CCccCHhheeccCCeEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHH
Confidence 44444322 1222222 1 3556899999964 6665532211 134555555554444
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+ +..+|..|++|+|++|+||+++. ++.++|+|||++..+.
T Consensus 109 ~~~L~~lH~~~~~H~dl~p~nil~~~--~~~~~l~df~~~~~~~ 150 (283)
T cd07835 109 LQGIAYCHSHRVLHRDLKPQNLLIDR--EGALKLADFGLARAFG 150 (283)
T ss_pred HHHHHHHHHCCeeCCCCCHHHEEEcC--CCcEEEeecccccccC
Confidence 3 77889999999999999999984 6899999999987654
No 362
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.14 E-value=1.6e-10 Score=134.85 Aligned_cols=141 Identities=14% Similarity=0.093 Sum_probs=90.2
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCCh-HHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~-~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
..||.|+||.||+|+.. +++.||+|+..... .... .-.|..|
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~------------------------------------~~~~~~E 62 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKERE------------------------------------KSQLVIE 62 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHH------------------------------------HHHHHHH
Confidence 57999999999999975 67899999875421 1100 0013345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-c--CCCeeEeeecCCccCCChhhHH---HcCCCHHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-S--SETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEI 274 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~--~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~~~~~l 274 (666)
+..+.++.+ ++ +.+-..+. . ...+|||||++|++|.++.... ...++...+...+
T Consensus 63 I~IL~~L~H------------------PNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia 124 (1021)
T PTZ00266 63 VNVMRELKH------------------KNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDIT 124 (1021)
T ss_pred HHHHHHcCC------------------CCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHH
Confidence 555555533 11 22222222 1 2357999999999998764321 1235555555555
Q ss_pred HHHH--HHHhhhc-------CccccCCCcCceEEeeC---------------CCCceEEEeccccccc
Q 005995 275 TRAY--AHQIYVD-------GFFNGDPHPGNFLVSKD---------------PPHRPILLDFGLTKKL 318 (666)
Q Consensus 275 ~~~~--l~~i~~~-------g~~H~D~hPgNilv~~~---------------~~~~i~liDFG~~~~l 318 (666)
.+++ +..+|.. +|+|+||||.|||++.+ ..+.++|+|||++..+
T Consensus 125 ~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l 192 (1021)
T PTZ00266 125 RQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNI 192 (1021)
T ss_pred HHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccc
Confidence 5544 6677764 59999999999999632 1234899999987643
No 363
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.14 E-value=1.6e-10 Score=118.36 Aligned_cols=144 Identities=14% Similarity=0.126 Sum_probs=92.6
Q ss_pred ccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
.+.+|+|++|.||+|... +|+.|++|+.+.......... .-..+.+|
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~--------------------------------~~~~~~~e 54 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSK--------------------------------EVSALECE 54 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHH--------------------------------HHHHHHHH
Confidence 367999999999999875 689999998754321100000 00114456
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcce-eeeeeee---cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vP~~~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~ 277 (666)
...+.++++ +++ .+...+. ....+++|||++|.+|.+.... ....+.......+.++
T Consensus 55 ~~~l~~l~h------------------~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi 115 (266)
T cd06651 55 IQLLKNLQH------------------ERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKA-YGALTESVTRKYTRQI 115 (266)
T ss_pred HHHHHHcCC------------------CCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHH
Confidence 555555532 122 1122222 1234789999999998876432 1224444444433333
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
. +..+|..|++|+|++|.||+++ .+++++|+|||++..+.
T Consensus 116 ~~~l~~LH~~~i~H~~l~p~nil~~--~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 116 LEGMSYLHSNMIVHRDIKGANILRD--SAGNVKLGDFGASKRLQ 157 (266)
T ss_pred HHHHHHHHhCCeeeCCCCHHHEEEC--CCCCEEEccCCCccccc
Confidence 3 6788999999999999999998 45889999999987653
No 364
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.14 E-value=1.8e-11 Score=129.46 Aligned_cols=77 Identities=21% Similarity=0.241 Sum_probs=62.9
Q ss_pred CeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 242 ~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.+++||||.-+.|..+.+. ...+.+..++.....+. ++.+|.+.|||||+|.-||||..+ .-++|.|||-.+.++
T Consensus 187 yCIiMEfCa~GqL~~VLka-~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~--d~VKIsDFGTS~e~~ 263 (904)
T KOG4721|consen 187 YCIIMEFCAQGQLYEVLKA-GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYD--DVVKISDFGTSKELS 263 (904)
T ss_pred eEEeeeccccccHHHHHhc-cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeecc--ceEEeccccchHhhh
Confidence 4799999999999887542 34566777777766655 888999999999999999999953 579999999998886
Q ss_pred HH
Q 005995 320 SS 321 (666)
Q Consensus 320 ~~ 321 (666)
+.
T Consensus 264 ~~ 265 (904)
T KOG4721|consen 264 DK 265 (904)
T ss_pred hh
Confidence 54
No 365
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.14 E-value=1.4e-10 Score=119.62 Aligned_cols=139 Identities=19% Similarity=0.276 Sum_probs=88.4
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.+|.|++|+||+|+.. +|+.||||+.+....... +.+...|.
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~------------------------------------~~~~~~e~ 48 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE------------------------------------QVNNLREI 48 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCch------------------------------------hhhHHHHH
Confidence 46899999999999965 789999998654321100 00111233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-c--CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++.+ +++ +.+...+. . +..++||||++| ++.+........++...+...+.++.
T Consensus 49 ~~l~~l~~-----------------h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~ 110 (282)
T cd07831 49 QALRRLSP-----------------HPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLL 110 (282)
T ss_pred HHHhhcCC-----------------CCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 33333321 111 11222222 2 556899999987 44433221122345555555555544
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|++|.||+++ . +.++|+|||.+..+.
T Consensus 111 ~~L~~LH~~~i~H~dl~p~ni~l~--~-~~~kl~dfg~~~~~~ 150 (282)
T cd07831 111 KSLDHMHRNGIFHRDIKPENILIK--D-DILKLADFGSCRGIY 150 (282)
T ss_pred HHHHHHHHCCceecccCHHHEEEc--C-CCeEEEecccccccc
Confidence 7889999999999999999998 3 899999999987653
No 366
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.13 E-value=1.4e-10 Score=116.72 Aligned_cols=78 Identities=17% Similarity=0.196 Sum_probs=58.8
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
....+++|||++|++|.+... ....++...+...+.+++ +..+|..|++|+|+||.||+++ .++.+.++|||.+.
T Consensus 57 ~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~--~~~~~~l~df~~~~ 133 (237)
T cd05576 57 EDSVFLVLQHAEGGKLWSHIS-KFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD--DRGHIQLTYFSRWS 133 (237)
T ss_pred CCeEEEEEecCCCCCHHHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc--CCCCEEEecccchh
Confidence 345689999999999977643 223455555555554443 6788999999999999999998 45889999999876
Q ss_pred ccC
Q 005995 317 KLS 319 (666)
Q Consensus 317 ~l~ 319 (666)
.+.
T Consensus 134 ~~~ 136 (237)
T cd05576 134 EVE 136 (237)
T ss_pred ccc
Confidence 543
No 367
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.13 E-value=1.3e-10 Score=120.10 Aligned_cols=79 Identities=27% Similarity=0.383 Sum_probs=57.3
Q ss_pred cCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~ 315 (666)
....++||||+ ++++.+...... ..++...+...+.++. +..+|..|++|+|++|+||+++ +++.++|+|||.+
T Consensus 70 ~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~--~~~~~~l~d~~~~ 146 (283)
T cd07830 70 NDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVS--GPEVVKIADFGLA 146 (283)
T ss_pred CCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc--CCCCEEEeecccc
Confidence 35568999999 556655432211 2345555555555544 6788999999999999999998 4589999999998
Q ss_pred cccCH
Q 005995 316 KKLSS 320 (666)
Q Consensus 316 ~~l~~ 320 (666)
..+..
T Consensus 147 ~~~~~ 151 (283)
T cd07830 147 REIRS 151 (283)
T ss_pred eeccC
Confidence 86643
No 368
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.13 E-value=5.6e-10 Score=108.66 Aligned_cols=48 Identities=21% Similarity=0.367 Sum_probs=41.3
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHHHHH
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAK 328 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~~~ 328 (666)
++.+|..||.|||+||||+||+ .+.-++++|||+++.-+.+++..+..
T Consensus 169 LKYLHsA~ILHRDIKPGNLLVN--SNCvLKICDFGLARvee~d~~~hMTq 216 (449)
T KOG0664|consen 169 LKYLHTANILHRDIKPGNLLVN--SNCILKICDFGLARTWDQRDRLNMTH 216 (449)
T ss_pred hHHHhhcchhhccCCCccEEec--cCceEEecccccccccchhhhhhhHH
Confidence 6788999999999999999998 55788999999999888777766543
No 369
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.13 E-value=6.9e-11 Score=125.17 Aligned_cols=145 Identities=13% Similarity=0.119 Sum_probs=104.7
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+-+|.|+||.++..+.+ +++.+|+|.++-.-...- -++ +-.+|.
T Consensus 10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~-----------------------------~r~------~A~~E~ 54 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEP-----------------------------ERR------SAIQEM 54 (426)
T ss_pred hhcCccccchhhhhhhccCCceEEEEEEeccccCch-----------------------------hhH------HHHHHH
Confidence 45899999999999865 788999997642110000 000 233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cCC-CeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHHH-
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSE-TVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~~-~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~~- 278 (666)
.-+.+++|- .-|..++.+. .+. .++||+|++|+++.+...-.+ .-+..+++...++++.
T Consensus 55 ~lis~~~hP-----------------~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~ 117 (426)
T KOG0589|consen 55 DLLSKLLHP-----------------NIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILL 117 (426)
T ss_pred HHHHhccCC-----------------CeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHH
Confidence 555554431 1244444443 444 689999999999998765433 3466788888888876
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHH
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~ 322 (666)
+..+|+.+++|||+|+.||+++. ++.|+|-|||+++.+.++.
T Consensus 118 av~ylH~~~iLHRDlK~~Nifltk--~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 118 AVNYLHENRVLHRDLKCANIFLTK--DKKVKLGDFGLAKILNPED 160 (426)
T ss_pred HHHHHHhhhhhcccchhhhhhccc--cCceeecchhhhhhcCCch
Confidence 88899999999999999999995 4789999999999998765
No 370
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.13 E-value=1.7e-10 Score=120.75 Aligned_cols=142 Identities=15% Similarity=0.142 Sum_probs=89.8
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
..||.|++|+||+|+.. +|+.||||+........- ....+.+|.
T Consensus 18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-----------------------------------~~~~~~~e~ 62 (310)
T cd07865 18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEG-----------------------------------FPITALREI 62 (310)
T ss_pred EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCC-----------------------------------chhHHHHHH
Confidence 57999999999999975 799999997643211000 000122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---------cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---------~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~ 273 (666)
+.+.++.+. .-+.+..++. ....++||||+.+ ++.+........++...+...
T Consensus 63 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i 124 (310)
T cd07865 63 KILQLLKHE-----------------NVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKV 124 (310)
T ss_pred HHHHhCCCC-----------------CccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHH
Confidence 444444321 0111111111 1234899999976 444332211123555555555
Q ss_pred HHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 274 l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+.+++ +..+|..|++|+|++|.||+++ .++.++|+|||++..+..
T Consensus 125 ~~qi~~al~~lH~~~i~H~dl~p~nil~~--~~~~~kl~dfg~~~~~~~ 171 (310)
T cd07865 125 MKMLLNGLYYIHRNKILHRDMKAANILIT--KDGILKLADFGLARAFSL 171 (310)
T ss_pred HHHHHHHHHHHHHCCeeccCCCHHHEEEC--CCCcEEECcCCCcccccC
Confidence 55544 7889999999999999999998 458999999999987643
No 371
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.12 E-value=2.3e-10 Score=118.02 Aligned_cols=138 Identities=14% Similarity=0.125 Sum_probs=93.6
Q ss_pred cccccceeeeeEEEEecC-----CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 124 TPLATASIAQVHRATLVD-----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~-----g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
+-||+|++|.||+|...+ +..|++|+.+........ -.+
T Consensus 12 ~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~------------------------------------~~~ 55 (280)
T cd05043 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQV------------------------------------TLL 55 (280)
T ss_pred eeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHH------------------------------------HHH
Confidence 569999999999999765 688999987644321110 113
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-----cCCCeeEeeecCCccCCChhhHHH-------cCCC
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEA-------FGVN 266 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-----~~~~vLvmE~i~G~~L~~~~~~~~-------~~~~ 266 (666)
.+|...+.++.| ..+.+++. ....++++||+++.+|.+...... ..++
T Consensus 56 ~~e~~~l~~l~h--------------------~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~ 115 (280)
T cd05043 56 LQESCLLYGLSH--------------------QNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALS 115 (280)
T ss_pred HHHHHHHHhCCC--------------------CCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCC
Confidence 345554444422 22233322 245689999999999887643321 1244
Q ss_pred HHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 267 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 267 ~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
...+...+.++. +..+|..|++|+|++|.||+++ .++.++|+|||+++.+.
T Consensus 116 ~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~--~~~~~kl~d~g~~~~~~ 168 (280)
T cd05043 116 TQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVID--EELQVKITDNALSRDLF 168 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEc--CCCcEEECCCCCccccc
Confidence 455555444444 7788999999999999999998 45899999999998664
No 372
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.12 E-value=2.3e-10 Score=117.52 Aligned_cols=139 Identities=20% Similarity=0.201 Sum_probs=89.5
Q ss_pred cccccceeeeeEEEEec----CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHH
Q 005995 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~----~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 199 (666)
+.||.|++|.||+|.+. +|+.||||+.+.+....... -++.
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~-----------------------------------~~~~ 49 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDI-----------------------------------EEFL 49 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHH-----------------------------------HHHH
Confidence 47999999999999864 47899999886644221110 0133
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---c----C---CCeeEeeecCCccCCChhhHHHc-----C
Q 005995 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---S----S---ETVLILEFMDGIRLNDCESLEAF-----G 264 (666)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---~----~---~~vLvmE~i~G~~L~~~~~~~~~-----~ 264 (666)
+|.+.+.++.+ ..+.+.+. . + -.++++||.+++++.+....... .
T Consensus 50 ~E~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 109 (273)
T cd05074 50 REAACMKEFDH--------------------PNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFT 109 (273)
T ss_pred HHHHHHhcCCC--------------------CCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCC
Confidence 45444444322 12333332 1 1 12688999999888765432211 1
Q ss_pred CCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 265 ~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.+...+...+.++. +..+|..|++|+|++|.||+++ .++.++|+|||.+..+.
T Consensus 110 l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~--~~~~~kl~dfg~~~~~~ 164 (273)
T cd05074 110 LPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLN--ENMTVCVADFGLSKKIY 164 (273)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEc--CCCCEEECccccccccc
Confidence 33334444444433 6788999999999999999998 45889999999988653
No 373
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.12 E-value=2e-10 Score=116.41 Aligned_cols=140 Identities=15% Similarity=0.109 Sum_probs=91.4
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.|+.|++|.||+++.. +|+.+|||.........-. ...+..|.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~-----------------------------------~~~~~~e~ 50 (256)
T cd08530 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKE-----------------------------------REDAVNEI 50 (256)
T ss_pred eeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHH-----------------------------------HHHHHHHH
Confidence 46899999999999864 7899999987543211000 00122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHH---HcCCCHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEIT 275 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~~~~~l~ 275 (666)
+.+..+.+ ..+++++. ....++||||++|.+|.+...-. ....+...+...+.
T Consensus 51 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 110 (256)
T cd08530 51 RILASVNH--------------------PNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFI 110 (256)
T ss_pred HHHHhCCC--------------------CCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHH
Confidence 33333221 12333321 35568999999999988764321 12345555545444
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
++. +..+|..|++|+|++|.||+++. ++.++|+|||++.....
T Consensus 111 ~l~~al~~lh~~~i~h~~l~~~ni~~~~--~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 111 QLLRGLQALHEQKILHRDLKSANILLVA--NDLVKIGDLGISKVLKK 155 (256)
T ss_pred HHHHHHHHHhhCCcccCCCCcceEEEec--CCcEEEeeccchhhhcc
Confidence 433 67889999999999999999994 58899999999876644
No 374
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.12 E-value=3.1e-10 Score=115.32 Aligned_cols=139 Identities=13% Similarity=0.168 Sum_probs=92.4
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCC-hHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~-~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
+.+|+|++|.||.++.. +|+.||||..... ..... .-++.+|
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~~e 49 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKE------------------------------------REESRKE 49 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHH------------------------------------HHHHHHH
Confidence 57999999999999975 7899999975321 11000 0013334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITR 276 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~ 276 (666)
.+.+.++.+ ..+++++. .+..++||||++|.+|.+...... ...+...+...+.+
T Consensus 50 ~~~l~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 109 (256)
T cd08218 50 VAVLSNMKH--------------------PNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQ 109 (256)
T ss_pred HHHHHhCCC--------------------CCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHH
Confidence 444443322 12333332 456689999999998877543221 13444544444444
Q ss_pred HH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 277 ~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+. +..+|..|++|+|++|.||+++ .++.++++|||++..+..
T Consensus 110 l~~~l~~lh~~~i~h~~l~~~nil~~--~~~~~~l~d~~~~~~~~~ 153 (256)
T cd08218 110 ICLALKHVHDRKILHRDIKSQNIFLT--KDGTIKLGDFGIARVLNS 153 (256)
T ss_pred HHHHHHHHHhCCEecCCCCHHHEEEc--CCCCEEEeeccceeecCc
Confidence 43 6778999999999999999998 457899999999987654
No 375
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.12 E-value=9.6e-10 Score=102.07 Aligned_cols=145 Identities=20% Similarity=0.273 Sum_probs=94.8
Q ss_pred CccccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 122 VETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 122 ~~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
+..++-.|.-|.|+++.. +|+..+||-..|.--..-..|.++-+. ...+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~-----------------------------Rt~~E 60 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRK-----------------------------RTKQE 60 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHH-----------------------------HHHHH
Confidence 456888999999999987 799999996543211111122221110 13458
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--cCCCeeEeeecCC-ccCCChhhHHHcC--CCHH--HHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDG-IRLNDCESLEAFG--VNKQ--KVVEEI 274 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~~~~vLvmE~i~G-~~L~~~~~~~~~~--~~~~--~~~~~l 274 (666)
|+.+.+++. .++.+|.++. .....|.|||++| .++.+.....-.. .+.. .++..+
T Consensus 61 ar~l~k~~~------------------~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~i 122 (229)
T KOG3087|consen 61 ARLLAKCRA------------------LGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRI 122 (229)
T ss_pred HHHHHHHHH------------------hCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHH
Confidence 888888776 2689999997 5677999999999 3444432211111 1111 222222
Q ss_pred HHHHHHHhhhcCccccCCCcCceEEeeCCCCce--EEEeccccc
Q 005995 275 TRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGLTK 316 (666)
Q Consensus 275 ~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i--~liDFG~~~ 316 (666)
-+ .+.-+|..+++|+|+--+||++.++ ++++ .+||||+..
T Consensus 123 G~-~igklH~ndiiHGDLTTSNill~~~-~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 123 GE-LIGKLHDNDIIHGDLTTSNILLRSD-GNQITPILIDFGLSS 164 (229)
T ss_pred HH-HHHHhhhCCeecccccccceEEecC-CCcCceEEEeecchh
Confidence 22 2556799999999999999999864 3454 899999864
No 376
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.12 E-value=1.5e-10 Score=123.56 Aligned_cols=75 Identities=21% Similarity=0.349 Sum_probs=55.7
Q ss_pred CCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 241 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
..++||||+ |.+|.++. ....++...+...+.++. +..+|..|++|+|++|.||+++ .++.++|+|||++...
T Consensus 94 ~~~lv~e~~-~~~L~~~~--~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~--~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 94 DVYLVTHLM-GADLNNIV--KCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN--EDCELKILDFGLARHT 168 (343)
T ss_pred cEEEEEecC-CCCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC--CCCCEEEccccccccc
Confidence 358999999 44665553 233455555555444443 6788999999999999999998 4589999999998876
Q ss_pred CH
Q 005995 319 SS 320 (666)
Q Consensus 319 ~~ 320 (666)
..
T Consensus 169 ~~ 170 (343)
T cd07851 169 DD 170 (343)
T ss_pred cc
Confidence 43
No 377
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.11 E-value=2e-10 Score=122.17 Aligned_cols=74 Identities=16% Similarity=0.284 Sum_probs=54.2
Q ss_pred CCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 241 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
..+++|||+++ ++.+. +....++...+...+.+++ +..+|..|++|+|+||.||+++ .++.++|+|||++...
T Consensus 82 ~~~lv~e~~~~-~l~~~--~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~--~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 82 DVYIVQELMET-DLYKL--IKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLN--TNCDLKICDFGLARIA 156 (336)
T ss_pred eEEEEehhccc-CHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC--CCCCEEECcccceeec
Confidence 45899999986 33332 2233445555544444443 7889999999999999999998 4589999999998765
Q ss_pred C
Q 005995 319 S 319 (666)
Q Consensus 319 ~ 319 (666)
.
T Consensus 157 ~ 157 (336)
T cd07849 157 D 157 (336)
T ss_pred c
Confidence 4
No 378
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.11 E-value=3.9e-10 Score=116.83 Aligned_cols=137 Identities=14% Similarity=0.147 Sum_probs=87.1
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
..||+|++|.||+++.. +|+.||||..+...... .+.++..|.
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~e~ 53 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEK------------------------------------EQKRLLMDL 53 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccChH------------------------------------HHHHHHHHH
Confidence 56999999999999965 78999999765432110 011233454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhH----HHcCCCHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESL----EAFGVNKQKVVEEI 274 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~----~~~~~~~~~~~~~l 274 (666)
..+.++.. +..+++++. ....+++|||+++ ++.++... ....++...+...+
T Consensus 54 ~~l~~~~~-------------------~~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~ 113 (288)
T cd06616 54 DVVMRSSD-------------------CPYIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIA 113 (288)
T ss_pred HHHHHhcC-------------------CCCEeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 44444321 123444432 4566899999875 44332211 11234444444444
Q ss_pred HHHH--HHHhhh-cCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 275 TRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 275 ~~~~--l~~i~~-~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
.++. +..+|. .|++|+|+||.||+++. ++.++|+|||++..+
T Consensus 114 ~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~~~~ 158 (288)
T cd06616 114 VATVKALNYLKEELKIIHRDVKPSNILLDR--NGNIKLCDFGISGQL 158 (288)
T ss_pred HHHHHHHHHHhhcCCeeccCCCHHHEEEcc--CCcEEEeecchhHHh
Confidence 4433 677776 59999999999999984 588999999998754
No 379
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.10 E-value=2.8e-10 Score=117.57 Aligned_cols=137 Identities=18% Similarity=0.173 Sum_probs=90.1
Q ss_pred cccccceeeeeEEEEec------CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~------~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
..+|.|++|.||+|..+ ++..||+|......... .-+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~-------------------------------------~~~ 53 (280)
T cd05092 11 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA-------------------------------------RQD 53 (280)
T ss_pred cccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHH-------------------------------------HHH
Confidence 56999999999999742 46689999754321110 012
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH-----------
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 262 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~----------- 262 (666)
+.+|.+.+.++.+ ..+.+++. ....+++|||++|++|.++.....
T Consensus 54 ~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~ 113 (280)
T cd05092 54 FQREAELLTVLQH--------------------QHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGED 113 (280)
T ss_pred HHHHHHHHhcCCC--------------------CCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhccccc
Confidence 4445555544422 12333332 455689999999999887643211
Q ss_pred ---cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 263 ---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 263 ---~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
..++...+...+.++. +..+|..|++|+|++|.||+++ .++.++|+|||++..+.
T Consensus 114 ~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~--~~~~~kL~dfg~~~~~~ 173 (280)
T cd05092 114 VAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG--QGLVVKIGDFGMSRDIY 173 (280)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc--CCCCEEECCCCceeEcC
Confidence 1133444444444433 6788999999999999999998 45889999999987653
No 380
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.10 E-value=5.8e-11 Score=130.22 Aligned_cols=175 Identities=18% Similarity=0.215 Sum_probs=116.8
Q ss_pred HhhcCCCCCHHHHHHHHHHHhCCChhccccccCccccccceeeeeEEEEec-CC---CEEEEEeeCCChHHHHHHHHHHH
Q 005995 90 LQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV-DG---RQVVVKVQHQGIKTIILEDLKNA 165 (666)
Q Consensus 90 l~d~~~~~~~~~~~~~l~~~~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~-~g---~~VAVKv~~p~~~~~~~~dl~~l 165 (666)
.+--+.|+.+++--+.+. ||-+.++--+-.++ +-||+|.||.||+|+|+ .| ..||||-++-|..+.-
T Consensus 603 ~k~YiDP~TYEDPnqAvr-eFakEId~s~i~Ie-~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytekq------- 673 (996)
T KOG0196|consen 603 TKTYIDPHTYEDPNQAVR-EFAKEIDPSCVKIE-KVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQ------- 673 (996)
T ss_pred ceeecCCccccCccHHHH-HhhhhcChhheEEE-EEEecccccceecccccCCCCcceeEEEeeeccCccHHH-------
Confidence 334455666554333332 22233333333444 57999999999999997 33 5799999988866543
Q ss_pred HHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcce-eeeeeee-cCCCe
Q 005995 166 KSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETV 243 (666)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vP~~~~-~~~~v 243 (666)
..||..||..+-+|.| |++ +.--|.. +....
T Consensus 674 -----------------------------rrdFL~EAsIMGQFdH------------------PNIIrLEGVVTks~PvM 706 (996)
T KOG0196|consen 674 -----------------------------RRDFLSEASIMGQFDH------------------PNIIRLEGVVTKSKPVM 706 (996)
T ss_pred -----------------------------HhhhhhhhhhcccCCC------------------CcEEEEEEEEecCceeE
Confidence 3357788887766643 333 2333333 44456
Q ss_pred eEeeecCCccCCChhhHHHcCCCHHHHHHH--HHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 244 LILEFMDGIRLNDCESLEAFGVNKQKVVEE--ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 244 LvmE~i~G~~L~~~~~~~~~~~~~~~~~~~--l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+++|||+.++|+.++..+...+..-+++.- .+.+-++.+-..|+||||+-..||||+ .+-..++.|||+++.+.++
T Consensus 707 IiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVN--snLvCKVsDFGLSRvledd 784 (996)
T KOG0196|consen 707 IITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVN--SNLVCKVSDFGLSRVLEDD 784 (996)
T ss_pred EEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeec--cceEEEeccccceeecccC
Confidence 899999999999986655444444444443 334448888889999999999999998 4455689999999988554
Q ss_pred H
Q 005995 322 M 322 (666)
Q Consensus 322 ~ 322 (666)
.
T Consensus 785 ~ 785 (996)
T KOG0196|consen 785 P 785 (996)
T ss_pred C
Confidence 3
No 381
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.10 E-value=2.7e-10 Score=116.76 Aligned_cols=81 Identities=12% Similarity=0.294 Sum_probs=59.5
Q ss_pred cCCCeeEeeecCCccCCChhhH-H--HcCCCHHHHHHHHHHHH--HHHhhh-cCccccCCCcCceEEeeCCCCceEEEec
Q 005995 239 SSETVLILEFMDGIRLNDCESL-E--AFGVNKQKVVEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDF 312 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~-~--~~~~~~~~~~~~l~~~~--l~~i~~-~g~~H~D~hPgNilv~~~~~~~i~liDF 312 (666)
....+++|||++|.+|.+.... . ...++...+...+.+++ +..+|. .|++|+|++|.||+++ .++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~--~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLG--EDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEEC--CCCcEEEecc
Confidence 4567899999999999876422 1 12344444555444443 677774 7899999999999998 4589999999
Q ss_pred ccccccCHH
Q 005995 313 GLTKKLSSS 321 (666)
Q Consensus 313 G~~~~l~~~ 321 (666)
|++......
T Consensus 159 g~~~~~~~~ 167 (269)
T cd08528 159 GLAKQKQPE 167 (269)
T ss_pred cceeecccc
Confidence 999876543
No 382
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.10 E-value=2.1e-10 Score=119.58 Aligned_cols=72 Identities=19% Similarity=0.330 Sum_probs=48.5
Q ss_pred eeEeeecCCccCCChhhHHHc-CCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 243 VLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 243 vLvmE~i~G~~L~~~~~~~~~-~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+++||++.+ .+.+.. ... ..+...+...+.++. +..+|..|++|||+||.|||++ +++.++|+|||+++.+.
T Consensus 103 ~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~--~~~~~~l~DFGla~~~~ 177 (294)
T PHA02882 103 FILLEKLVE-NTKEIF--KRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD--GNNRGYIIDYGIASHFI 177 (294)
T ss_pred EEEEehhcc-CHHHHH--HhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCcEEEEEcCCceeec
Confidence 577777643 222221 111 123333344444433 7788999999999999999998 45889999999998764
No 383
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.10 E-value=2.8e-10 Score=117.30 Aligned_cols=141 Identities=18% Similarity=0.207 Sum_probs=90.5
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|... +|+.|++|..+........ .-++..|.
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~-----------------------------------~~~~~~e~ 49 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGI-----------------------------------PKTALREI 49 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccchh-----------------------------------HHHHHHHH
Confidence 46999999999999875 7899999987654321100 00122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee---e-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~---~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~ 278 (666)
..+.++.+ ..+.+++ . ....+++|||++| ++.+........++...+...+.+++
T Consensus 50 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~ 108 (283)
T cd05118 50 KLLKELNH--------------------PNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLL 108 (283)
T ss_pred HHHHHhcC--------------------CCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHH
Confidence 33333321 1122222 1 3556899999987 55554322222445444444444433
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~ 322 (666)
+..+|..|++|+|+||.||+++ .++.++|+|||.+..+....
T Consensus 109 ~~l~~LH~~~i~H~dl~p~nili~--~~~~~~l~df~~~~~~~~~~ 152 (283)
T cd05118 109 QGLAFCHSHGILHRDLKPENLLIN--TEGVLKLADFGLARSFGSPV 152 (283)
T ss_pred HHHHHHHHCCeeecCcCHHHEEEC--CCCcEEEeeeeeeEecCCCc
Confidence 6788999999999999999998 45889999999988776543
No 384
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.08 E-value=2.6e-10 Score=119.02 Aligned_cols=141 Identities=21% Similarity=0.172 Sum_probs=92.5
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+-+|+|.||.||+|.+ +++.|||||..+.-.+...++-++.. .|. .+-.
T Consensus 216 eli~~Grfg~V~KaqL-~~~~VAVKifp~~~kqs~~~Ek~Iy~---------lp~---------------------m~h~ 264 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQL-DNRLVAVKIFPEQEKQSFQNEKNIYS---------LPG---------------------MKHE 264 (534)
T ss_pred HHhhcCccceeehhhc-cCceeEEEecCHHHHHHHHhHHHHHh---------ccC---------------------ccch
Confidence 4589999999999998 56999999987655444443322211 111 1223
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHH---HHHHHHHHHHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQK---VVEEITRAYAH 280 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~---~~~~l~~~~l~ 280 (666)
|+.+|-..=+. .+.. ..+.+||+||-+-++|.++. ..+-++-.. +++.+++- +.
T Consensus 265 nIl~Fi~~ekr------------------~t~~--~~eywLVt~fh~kGsL~dyL--~~ntisw~~~cria~SmarG-La 321 (534)
T KOG3653|consen 265 NILQFIGAEKR------------------GTAD--RMEYWLVTEFHPKGSLCDYL--KANTISWNSLCRIAESMARG-LA 321 (534)
T ss_pred hHHHhhchhcc------------------CCcc--ccceeEEeeeccCCcHHHHH--HhccccHHHHHHHHHHHHHH-HH
Confidence 44444321000 0000 12458999999999999984 444555443 33334332 55
Q ss_pred Hhhh---------cCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 281 QIYV---------DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 281 ~i~~---------~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
++|+ -+|.|||+|..||||. .|++.+|.|||++..+++
T Consensus 322 ~LHee~p~~d~~Kp~IaHRDlkSkNVLvK--~DlTccIaDFGLAl~~~p 368 (534)
T KOG3653|consen 322 HLHEELPRGDHHKPPIAHRDLKSKNVLVK--NDLTCCIADFGLALRLEP 368 (534)
T ss_pred HhcccCCcCCCCCCccccccccccceEEc--cCCcEEeeccceeEEecC
Confidence 5664 4799999999999998 569999999999998864
No 385
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.08 E-value=2.3e-10 Score=121.32 Aligned_cols=140 Identities=17% Similarity=0.240 Sum_probs=90.8
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+-||+|+-+.||++...+.+-+|+|-..- ...|- ..++ -|++|..
T Consensus 367 k~iG~GGSSkV~kV~~s~~~iyalkkv~~-----~~~D~--------------------qtl~----------gy~nEI~ 411 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNSDKQIYALKKVVL-----LEADN--------------------QTLD----------GYRNEIA 411 (677)
T ss_pred HhhcCCCcceeeeeecCCCcchhhhHHHH-----hhcCH--------------------HHHH----------HHHHHHH
Confidence 56999999999999876667777762110 00111 0111 1677888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHH----HHHHHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQK----VVEEIT 275 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~----~~~~l~ 275 (666)
-+.+|++. ..|-++|. .+..+||||+=+ ..|..+..- ..+..+.. ..+.++
T Consensus 412 lL~KLkg~-------------------~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k-~~~~~~~~~lk~ywkqML 470 (677)
T KOG0596|consen 412 LLNKLKGH-------------------DKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKK-KKSIDPDWFLKFYWKQML 470 (677)
T ss_pred HHHHhcCC-------------------ceEEEEeeeeccCceEEEEeeccc-ccHHHHHHh-ccCCCchHHHHHHHHHHH
Confidence 88887652 45556654 456689999753 445554321 11222211 222222
Q ss_pred HHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHH
Q 005995 276 RAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (666)
Q Consensus 276 ~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~ 323 (666)
+ +.+.+|.+||||+|+||.|+|+- .|.++|||||++..+.++..
T Consensus 471 ~-aV~~IH~~gIVHSDLKPANFLlV---kG~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 471 L-AVKTIHQHGIVHSDLKPANFLLV---KGRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred H-HHHHHHHhceeecCCCcccEEEE---eeeEEeeeechhcccCcccc
Confidence 2 36778999999999999999986 48999999999998876543
No 386
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.07 E-value=1.6e-10 Score=129.55 Aligned_cols=79 Identities=18% Similarity=0.123 Sum_probs=51.4
Q ss_pred cCCCeeEeeecCCccCCChhhHHHc----CCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEec
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAF----GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDF 312 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~----~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDF 312 (666)
....+++||++.+. +.+....... ......+...+.++. +..+|..|++|+|+||+|||++ .++.++|+||
T Consensus 235 ~~~~~lv~e~~~~~-l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~--~~~~vkL~DF 311 (501)
T PHA03210 235 EANTYMITQKYDFD-LYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLN--CDGKIVLGDF 311 (501)
T ss_pred CCeeEEEEeccccC-HHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC--CCCCEEEEeC
Confidence 45568999998653 3222110000 011122222333332 7888999999999999999998 4589999999
Q ss_pred ccccccCH
Q 005995 313 GLTKKLSS 320 (666)
Q Consensus 313 G~~~~l~~ 320 (666)
|++..+..
T Consensus 312 Gla~~~~~ 319 (501)
T PHA03210 312 GTAMPFEK 319 (501)
T ss_pred CCceecCc
Confidence 99987653
No 387
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.07 E-value=9.5e-11 Score=111.43 Aligned_cols=141 Identities=16% Similarity=0.239 Sum_probs=93.6
Q ss_pred cccccceeeeeEEEEe-cCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l-~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.+|.|.++.|+.|.. .+.++++||+++|--.+.+.+++++|+.+.. .|
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~g-----g~------------------------- 93 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRG-----GP------------------------- 93 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccC-----CC-------------------------
Confidence 5799999999999984 4789999999999888888888877665531 01
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~ 280 (666)
|+..+-.... =|. |....|+.||++......+ -. .+.-.++..-+.+++ +.
T Consensus 94 -NIi~L~DiV~-------------------Dp~---SktpaLiFE~v~n~Dfk~l---y~-tl~d~dIryY~~elLkALd 146 (338)
T KOG0668|consen 94 -NIIKLLDIVK-------------------DPE---SKTPSLIFEYVNNTDFKQL---YP-TLTDYDIRYYIYELLKALD 146 (338)
T ss_pred -Ceeehhhhhc-------------------Ccc---ccCchhHhhhhccccHHHH---hh-hhchhhHHHHHHHHHHHHh
Confidence 1111111100 000 3344689999988554332 11 011122222222222 66
Q ss_pred HhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHH
Q 005995 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (666)
Q Consensus 281 ~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~ 322 (666)
..|..|++|||+||-|+|++.. ..++.|||||++..+.+..
T Consensus 147 yCHS~GImHRDVKPhNvmIdh~-~rkLrlIDWGLAEFYHp~~ 187 (338)
T KOG0668|consen 147 YCHSMGIMHRDVKPHNVMIDHE-LRKLRLIDWGLAEFYHPGK 187 (338)
T ss_pred HHHhcCcccccCCcceeeechh-hceeeeeecchHhhcCCCc
Confidence 7788999999999999999975 5789999999998776543
No 388
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.07 E-value=4e-10 Score=117.40 Aligned_cols=78 Identities=19% Similarity=0.270 Sum_probs=53.7
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhh-cCccccCCCcCceEEeeCCCCceEEEecccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~-~g~~H~D~hPgNilv~~~~~~~i~liDFG~~ 315 (666)
....+++|||+++ .+.++.......++...+...+.+++ +..+|. .|++|+|++|.||+++ .++.++|+|||++
T Consensus 86 ~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~--~~~~~kL~dfg~~ 162 (296)
T cd06618 86 DSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLD--ASGNVKLCDFGIS 162 (296)
T ss_pred CCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEc--CCCCEEECccccc
Confidence 3456899999876 44443222222344444444444433 667786 6999999999999998 4589999999998
Q ss_pred cccC
Q 005995 316 KKLS 319 (666)
Q Consensus 316 ~~l~ 319 (666)
..+.
T Consensus 163 ~~~~ 166 (296)
T cd06618 163 GRLV 166 (296)
T ss_pred hhcc
Confidence 7664
No 389
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.07 E-value=2.5e-10 Score=115.85 Aligned_cols=141 Identities=15% Similarity=0.176 Sum_probs=89.6
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+++|+|++|.||+|... +|..||+|.....-... . .+-.+.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~---------------------------------~~~~~~~E~ 50 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV--K---------------------------------EKEASKKEV 50 (257)
T ss_pred EEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc--h---------------------------------hhHHHHHHH
Confidence 57999999999999976 68999999764310000 0 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~ 277 (666)
..+..+++ ..+++++. .+..+++|||++|.+|.+...... ...+...+...+.++
T Consensus 51 ~~l~~~~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l 110 (257)
T cd08225 51 ILLAKMKH--------------------PNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQI 110 (257)
T ss_pred HHHHhCCC--------------------CChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 44444322 11222221 345689999999999877643211 123444444444333
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
. +..+|..|++|+|++|.||+++.+ +..++|+|||.+..+..
T Consensus 111 ~~~l~~lh~~~i~H~dl~~~nil~~~~-~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 111 SLGLKHIHDRKILHRDIKSQNIFLSKN-GMVAKLGDFGIARQLND 154 (257)
T ss_pred HHHHHHHHHCCcccccCCHHHEEEcCC-CCeEEecccccchhccC
Confidence 2 678899999999999999999843 23468999999877643
No 390
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.07 E-value=1.9e-10 Score=120.41 Aligned_cols=75 Identities=13% Similarity=0.210 Sum_probs=53.2
Q ss_pred CeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 242 ~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.++||||+++. +..........++...+...+.+++ +..+|..|++|+|++|+||+++ .++.++|+|||++....
T Consensus 90 ~~lv~~~~~~~-l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~--~~~~~~l~dfg~~~~~~ 166 (311)
T cd07866 90 VYMVTPYMDHD-LSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILID--NQGILKIADFGLARPYD 166 (311)
T ss_pred EEEEEecCCcC-HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC--CCCCEEECcCccchhcc
Confidence 47999999863 2222111112345555555444444 7788999999999999999998 45899999999988654
No 391
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.07 E-value=4.5e-10 Score=119.20 Aligned_cols=76 Identities=24% Similarity=0.312 Sum_probs=55.6
Q ss_pred CCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 241 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
..+++|||+++ +|.+... ....++...+...+.+++ +..+|..|++|+|+||+|||++ .++.++|+|||++..+
T Consensus 80 ~~~~~~e~~~~-~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~--~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 80 ELYLYEELMEA-DLHQIIR-SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN--ADCELKICDFGLARGF 155 (332)
T ss_pred cEEEEEecccC-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc--CCCCEEeCcCCCceec
Confidence 35789999875 5544421 223455555555555544 7889999999999999999998 4588999999999876
Q ss_pred CH
Q 005995 319 SS 320 (666)
Q Consensus 319 ~~ 320 (666)
..
T Consensus 156 ~~ 157 (332)
T cd07857 156 SE 157 (332)
T ss_pred cc
Confidence 53
No 392
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.07 E-value=5.6e-10 Score=118.27 Aligned_cols=76 Identities=14% Similarity=0.062 Sum_probs=55.8
Q ss_pred cCCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~ 315 (666)
....++||||++|.++.++.... ..+.+...+...+.+++ +..+|..|++|+|+||+||+++ .++.+++.|||.+
T Consensus 71 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~--~~~~~~~~~~~~~ 148 (328)
T cd08226 71 GSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS--GDGLVSLSGLSHL 148 (328)
T ss_pred CCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe--CCCcEEEechHHH
Confidence 45568999999999887764321 12345554444444443 6788999999999999999998 4588999999765
Q ss_pred c
Q 005995 316 K 316 (666)
Q Consensus 316 ~ 316 (666)
.
T Consensus 149 ~ 149 (328)
T cd08226 149 Y 149 (328)
T ss_pred h
Confidence 3
No 393
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.06 E-value=6.1e-10 Score=117.11 Aligned_cols=145 Identities=21% Similarity=0.282 Sum_probs=86.6
Q ss_pred ccccceeeeeEEEEec-CCCEEEEEeeCCCh--HHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGI--KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~--~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
-.|.|-|+.|.+|... -|..|||||+|-+- -+.-..++.+|+++.. ..| |
T Consensus 439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~----AD~-----------------------E 491 (752)
T KOG0670|consen 439 YTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLND----ADP-----------------------E 491 (752)
T ss_pred ccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhc----cCc-----------------------h
Confidence 4689999999999864 58899999998651 1222334444444421 011 1
Q ss_pred H-HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcC----CCHHHHHHHHHH
Q 005995 202 A-ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFG----VNKQKVVEEITR 276 (666)
Q Consensus 202 a-~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~----~~~~~~~~~l~~ 276 (666)
- .++.++...|.. ....+||.|-+ ...|.++ +...| +....+-...-+
T Consensus 492 dk~Hclrl~r~F~h------------------------knHLClVFE~L-slNLRev--LKKyG~nvGL~ikaVRsYaqQ 544 (752)
T KOG0670|consen 492 DKFHCLRLFRHFKH------------------------KNHLCLVFEPL-SLNLREV--LKKYGRNVGLHIKAVRSYAQQ 544 (752)
T ss_pred hhhHHHHHHHHhhh------------------------cceeEEEehhh-hchHHHH--HHHhCcccceeehHHHHHHHH
Confidence 1 122233222221 23447888765 2344444 33333 223333222223
Q ss_pred HH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHH
Q 005995 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (666)
Q Consensus 277 ~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~ 324 (666)
+| ++.+-.+|++||||||.||||.+. ...++|+|||.+...++.+-.
T Consensus 545 LflALklLK~c~vlHaDIKPDNiLVNE~-k~iLKLCDfGSA~~~~eneit 593 (752)
T KOG0670|consen 545 LFLALKLLKKCGVLHADIKPDNILVNES-KNILKLCDFGSASFASENEIT 593 (752)
T ss_pred HHHHHHHHHhcCeeecccCccceEeccC-cceeeeccCcccccccccccc
Confidence 33 455556899999999999999864 567899999999988765443
No 394
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.06 E-value=3.1e-10 Score=121.05 Aligned_cols=74 Identities=18% Similarity=0.283 Sum_probs=53.2
Q ss_pred CeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 242 ~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.++||||+++ +|.+. +....+....+...+.+++ +..+|..|++|+|+||+||+++.+ ++.++|+|||++..+.
T Consensus 91 ~~lv~e~~~~-~L~~~--~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~-~~~~kl~dfg~~~~~~ 166 (342)
T cd07854 91 VYIVQEYMET-DLANV--LEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTE-DLVLKIGDFGLARIVD 166 (342)
T ss_pred EEEEeecccc-cHHHH--HHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCC-CceEEECCcccceecC
Confidence 4799999986 55443 2223344444444444443 678899999999999999999853 4678999999987664
No 395
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.06 E-value=6.6e-10 Score=117.78 Aligned_cols=140 Identities=16% Similarity=0.184 Sum_probs=88.0
Q ss_pred ccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
.++||.|++|.||+|... +|+.||||.......... ..-++..|
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~E 59 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPV-----------------------------------LAKRTYRE 59 (328)
T ss_pred EEeecccCCeEEEEEEECCCCCEEEEEEecccccccc-----------------------------------hhHHHHHH
Confidence 368999999999999865 899999997643211000 00112334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
...+.++++ ..-+.+...+. ....+++|||+.+ +|.+.. .........+...+.++.
T Consensus 60 ~~~l~~l~h-----------------pniv~~~~~~~~~~~~~~lv~e~~~~-~L~~~~--~~~~~~~~~~~~~~~ql~~ 119 (328)
T cd07856 60 LKLLKHLRH-----------------ENIISLSDIFISPLEDIYFVTELLGT-DLHRLL--TSRPLEKQFIQYFLYQILR 119 (328)
T ss_pred HHHHHhcCC-----------------CCeeeEeeeEecCCCcEEEEeehhcc-CHHHHH--hcCCCCHHHHHHHHHHHHH
Confidence 444444432 01123333332 2346899999854 555442 223344333333333332
Q ss_pred -HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 279 -l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
+..+|..|++|+|++|.||+++ .++.++|+|||++...+
T Consensus 120 aL~~LH~~~iiH~dl~p~Nili~--~~~~~~l~dfg~~~~~~ 159 (328)
T cd07856 120 GLKYVHSAGVVHRDLKPSNILIN--ENCDLKICDFGLARIQD 159 (328)
T ss_pred HHHHHHhCCcccCCCCHHHEeEC--CCCCEEeCccccccccC
Confidence 6788999999999999999998 45889999999987654
No 396
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.05 E-value=5.6e-10 Score=120.34 Aligned_cols=140 Identities=18% Similarity=0.257 Sum_probs=94.2
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
.-||+|.||.|..|+.. +|.+||||+.....-.. ..++. +.+|.
T Consensus 62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~-----~~~~k------------------------------~~rev 106 (596)
T KOG0586|consen 62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP-----SKRQK------------------------------LGREV 106 (596)
T ss_pred eeeccceeEEEEeeEecCCCceEEEEEehhcccCh-----HHHHH------------------------------HHHHH
Confidence 56999999999999965 79999999875422111 00000 22233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcce-eeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHH-H--
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR-A-- 277 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~-~-- 277 (666)
+.+..+.| |++ .+-.++. ....+|||||..|+.+.+. +..++.+.+..++.... +
T Consensus 107 ~imk~l~H------------------PnIvkl~~v~~t~~~lylV~eya~~ge~~~y--l~~~gr~~e~~ar~~F~q~vs 166 (596)
T KOG0586|consen 107 DIMKSLNH------------------PNIVKLFSVIETEATLYLVMEYASGGELFDY--LVKHGRMKEKEARAKFRQIVS 166 (596)
T ss_pred HHHHhcCC------------------cceeeeeeeeeecceeEEEEEeccCchhHHH--HHhcccchhhhhhhhhHHHHH
Confidence 44444322 222 3333333 4566899999999888776 44555554444433332 2
Q ss_pred HHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 278 YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 278 ~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
.++.+|.++|+|+|||..|||++. +..++|.|||++..++.
T Consensus 167 aveYcH~k~ivHrdLk~eNilL~~--~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 167 AVEYCHSKNIVHRDLKAENILLDE--NMNIKIADFGFSTFFDY 207 (596)
T ss_pred HHHHHhhcceeccccchhhccccc--ccceeeeccccceeecc
Confidence 277889999999999999999994 46799999999998864
No 397
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.05 E-value=1.2e-09 Score=112.92 Aligned_cols=142 Identities=18% Similarity=0.196 Sum_probs=89.9
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|+.+ +|+.||||+.+......-. ..++.+|.
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~-----------------------------------~~~~~~e~ 49 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGI-----------------------------------PLSTLREI 49 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccchh-----------------------------------hhhHHHHH
Confidence 46899999999999986 5999999988643221000 00122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cC-----CCeeEeeecCCccCCChhhHH-HcCCCHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SS-----ETVLILEFMDGIRLNDCESLE-AFGVNKQKVVE 272 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~-----~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~ 272 (666)
..+.+++.. ++ ..+.+++. .. ..+++|||++| ++.+..... ...++...+..
T Consensus 50 ~~l~~l~~~---------------~h--~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~ 111 (287)
T cd07838 50 ALLKQLESF---------------EH--PNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKD 111 (287)
T ss_pred HHHHHhhcc---------------CC--CCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHH
Confidence 333333321 01 12222221 12 26899999986 555543221 12345555555
Q ss_pred HHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 273 ~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
.+.++. +..+|..|++|+|++|+||+++. ++.++|+|||.+..++.
T Consensus 112 ~~~~i~~al~~LH~~~i~h~~l~~~nili~~--~~~~~l~dfg~~~~~~~ 159 (287)
T cd07838 112 LMRQLLRGVDFLHSHRIVHRDLKPQNILVTS--DGQVKIADFGLARIYSF 159 (287)
T ss_pred HHHHHHHHHHHHHHCCeeeccCChhhEEEcc--CCCEEEeccCcceeccC
Confidence 555443 77889999999999999999994 58999999999877643
No 398
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.05 E-value=4e-10 Score=118.33 Aligned_cols=145 Identities=15% Similarity=0.168 Sum_probs=87.7
Q ss_pred cccccceeeeeEEEEec---CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHH
Q 005995 124 TPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~---~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 200 (666)
..||+|++|.||+|... +|+.||||+.++.....- .+.. .+.+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~----------------------------~~~~------~~~~ 51 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYT----------------------------GISQ------SACR 51 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEecccccccc----------------------------CccH------HHHH
Confidence 35999999999999975 479999998876431000 0000 0223
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-c--CCCeeEeeecCCccCCChhhHHH----cCCCHHHHHHH
Q 005995 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEA----FGVNKQKVVEE 273 (666)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~--~~~vLvmE~i~G~~L~~~~~~~~----~~~~~~~~~~~ 273 (666)
|+..+.++.+. .-+.+...+. . ...++||||+++. +.+...... ..+....+...
T Consensus 52 e~~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i 113 (316)
T cd07842 52 EIALLRELKHE-----------------NVVSLVEVFLEHADKSVYLLFDYAEHD-LWQIIKFHRQAKRVSIPPSMVKSL 113 (316)
T ss_pred HHHHHHhcCCC-----------------CccceEEEEeCCCCceEEEEEeCCCcC-HHHHHHhhccCCCcCcCHHHHHHH
Confidence 44444443220 0122222222 2 4468999999873 333221111 12334444444
Q ss_pred HHHHH--HHHhhhcCccccCCCcCceEEeeC--CCCceEEEecccccccCH
Q 005995 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 274 l~~~~--l~~i~~~g~~H~D~hPgNilv~~~--~~~~i~liDFG~~~~l~~ 320 (666)
+.++. +..+|..|++|+|++|.||+++.+ .++.++|+|||++..+..
T Consensus 114 ~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~ 164 (316)
T cd07842 114 LWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNA 164 (316)
T ss_pred HHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCC
Confidence 44433 778899999999999999999841 157899999999887643
No 399
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.04 E-value=1.4e-10 Score=112.61 Aligned_cols=140 Identities=18% Similarity=0.194 Sum_probs=83.3
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHH--
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS-- 200 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~-- 200 (666)
.-||.|+||.|++-..+ +|+..|||-+|-...+ .+. .++..|+|-..
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~---keq---------------------------~rll~e~d~~mks 119 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIE---KEQ---------------------------KRLLMEHDTVMKS 119 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccch---HHH---------------------------HHHHHHHHHHHhh
Confidence 56999999999999875 8999999987754331 111 01112222211
Q ss_pred -HHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhh----HHHcCCCHHHHHHH--
Q 005995 201 -EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCES----LEAFGVNKQKVVEE-- 273 (666)
Q Consensus 201 -Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~----~~~~~~~~~~~~~~-- 273 (666)
+..|+.+|...+- ..+.-++.||.++ .+++.+-. .....++.+-+...
T Consensus 120 ~~cp~IVkfyGa~F------------------------~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~Itv 174 (361)
T KOG1006|consen 120 SNCPNIVKFYGALF------------------------SEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITV 174 (361)
T ss_pred cCCcHHHHHhhhhh------------------------cCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheee
Confidence 1234455544321 1456689999996 34433211 11112222222111
Q ss_pred -HHHHHHHHhh-hcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 274 -ITRAYAHQIY-VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 274 -l~~~~l~~i~-~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
.+++ +.++- +..++|||+||+|||+++ .|.++|+|||+++.+-+.
T Consensus 175 atV~A-L~yLK~~lkiIHRDvKPSNILldr--~G~vKLCDFGIcGqLv~S 221 (361)
T KOG1006|consen 175 ATVDA-LDYLKEELKIIHRDVKPSNILLDR--HGDVKLCDFGICGQLVDS 221 (361)
T ss_pred eehhH-HHHHHHHhhhhhccCChhheEEec--CCCEeeecccchHhHHHH
Confidence 1222 33332 368999999999999994 589999999999987553
No 400
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.04 E-value=2.3e-10 Score=121.48 Aligned_cols=75 Identities=17% Similarity=0.295 Sum_probs=54.1
Q ss_pred CCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 241 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
..++||||+.| +|.+... ....++...+...+.++. +..+|..|++|+|+||.||+++ .++.++|+|||++..+
T Consensus 82 ~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~--~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 82 DVYVVMDLMES-DLHHIIH-SDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN--EDCELRIGDFGMARGL 157 (334)
T ss_pred eEEEEEehhhh-hHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc--CCCcEEecccccceee
Confidence 35899999976 5544421 122344444444444443 7788999999999999999998 4689999999998765
Q ss_pred C
Q 005995 319 S 319 (666)
Q Consensus 319 ~ 319 (666)
.
T Consensus 158 ~ 158 (334)
T cd07855 158 S 158 (334)
T ss_pred c
Confidence 4
No 401
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.04 E-value=3.3e-10 Score=119.92 Aligned_cols=77 Identities=16% Similarity=0.274 Sum_probs=55.2
Q ss_pred CCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 241 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
..+++|||+++ +|.+... ....++...+...+.+++ +..+|..|++|+|+||+||+++ .++.++|+|||++...
T Consensus 78 ~~~lv~e~~~~-~l~~~l~-~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~--~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 78 DVYIVTELMET-DLHKVIK-SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN--SNCDLKICDFGLARGV 153 (330)
T ss_pred ceEEEecchhh-hHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEcccCceEee
Confidence 45899999986 4544321 111344444444444433 6788999999999999999998 4589999999999987
Q ss_pred CHH
Q 005995 319 SSS 321 (666)
Q Consensus 319 ~~~ 321 (666)
...
T Consensus 154 ~~~ 156 (330)
T cd07834 154 DPD 156 (330)
T ss_pred ccc
Confidence 654
No 402
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.03 E-value=1.1e-09 Score=112.78 Aligned_cols=78 Identities=17% Similarity=0.220 Sum_probs=57.8
Q ss_pred CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 240 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
...++||||+++ +|.+.........+...+...+.+++ +..+|..|++|+|++|.||+++. ++.++|+|||.+..
T Consensus 71 ~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~--~~~~~l~d~g~~~~ 147 (282)
T cd07829 71 RKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINR--DGVLKLADFGLARA 147 (282)
T ss_pred CceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcC--CCCEEEecCCcccc
Confidence 456899999986 67665432212455555555444443 78899999999999999999984 58999999999877
Q ss_pred cCH
Q 005995 318 LSS 320 (666)
Q Consensus 318 l~~ 320 (666)
...
T Consensus 148 ~~~ 150 (282)
T cd07829 148 FGI 150 (282)
T ss_pred cCC
Confidence 643
No 403
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.03 E-value=7.7e-10 Score=117.62 Aligned_cols=139 Identities=19% Similarity=0.211 Sum_probs=87.2
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
+.||+|++|.||+|... +|+.||||.........- ....+..|.
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~-----------------------------------~~~~~~~E~ 57 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNAT-----------------------------------DAQRTFREI 57 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcch-----------------------------------hhhhhhHHH
Confidence 56999999999999975 689999997643211000 000133455
Q ss_pred HHHHHH-HHHhCCCCCCCCCCCCCCCCcc-eeeeeeeec---CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHH
Q 005995 203 ENTRIV-SANLGCKNKHEDSNKKPAYEVD-VLIPEVIQS---SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (666)
Q Consensus 203 ~n~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~~---~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~ 277 (666)
..+.++ .+ ++ +.+...+.. ...++||||++| +|.+.. ....++.......+.++
T Consensus 58 ~~l~~l~~h------------------~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~--~~~~~~~~~~~~i~~qi 116 (337)
T cd07852 58 MFLQELGDH------------------PNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVI--RANILEDVHKRYIMYQL 116 (337)
T ss_pred HHHHHhcCC------------------CCccceeeeeccCCCceEEEEeccccc-CHHHHH--hcCCCCHHHHHHHHHHH
Confidence 555555 22 11 122222211 235899999986 554432 22233433333333333
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+ +..+|..|++|+|++|.||+++ .++.++|+|||++..+..
T Consensus 117 ~~~L~~LH~~~i~H~dl~p~nill~--~~~~~kl~d~g~~~~~~~ 159 (337)
T cd07852 117 LKALKYIHSGNVIHRDLKPSNILLN--SDCRVKLADFGLARSLSE 159 (337)
T ss_pred HHHHHHHHHCCeecCCCCHHHEEEc--CCCcEEEeeccchhcccc
Confidence 2 6788999999999999999998 468999999999886643
No 404
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.03 E-value=6.3e-10 Score=104.49 Aligned_cols=81 Identities=21% Similarity=0.311 Sum_probs=53.1
Q ss_pred cCCCeeEeeecCCccCCChhh--HHHcCCCHHHHHHHHHHHH---HHHhhh-cCccccCCCcCceEEeeCCCCceEEEec
Q 005995 239 SSETVLILEFMDGIRLNDCES--LEAFGVNKQKVVEEITRAY---AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDF 312 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~--~~~~~~~~~~~~~~l~~~~---l~~i~~-~g~~H~D~hPgNilv~~~~~~~i~liDF 312 (666)
+.+-++.||.++- +++.+-. +...+.-++.+...++-.. +..+|+ -.++|||+||+|||++. +|+++++||
T Consensus 117 egdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~--~GqVKiCDF 193 (282)
T KOG0984|consen 117 EGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINY--DGQVKICDF 193 (282)
T ss_pred cccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEcc--CCcEEEccc
Confidence 7888999999863 3333211 1222222233322222222 555554 58999999999999994 599999999
Q ss_pred ccccccCHHH
Q 005995 313 GLTKKLSSSM 322 (666)
Q Consensus 313 G~~~~l~~~~ 322 (666)
|+++.+.+..
T Consensus 194 GIsG~L~dSi 203 (282)
T KOG0984|consen 194 GISGYLVDSI 203 (282)
T ss_pred ccceeehhhh
Confidence 9999987643
No 405
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.02 E-value=7.3e-10 Score=116.28 Aligned_cols=146 Identities=23% Similarity=0.211 Sum_probs=95.9
Q ss_pred ccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
++.||+|-|+.|-.|+.- +|+.|||||+..---+.+. .. .+..|
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~s-----------------------------t~------hlfqE 67 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLS-----------------------------TG------HLFQE 67 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEecccccchhh-----------------------------hh------HHHHH
Confidence 357999999999999864 9999999997432111000 00 12335
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~ 277 (666)
.+.++-.+| ..|.++|. .++.+|+.|.=+|+.|.|+.--...|+.....-....++
T Consensus 68 VRCMKLVQH--------------------pNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI 127 (864)
T KOG4717|consen 68 VRCMKLVQH--------------------PNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQI 127 (864)
T ss_pred HHHHHHhcC--------------------cCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHH
Confidence 566665544 23344443 688899999999999999865555555432211111111
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHH
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~ 324 (666)
+ +...|...+||||+||.|+.+-+. -|-++|.|||+.-.+-+..+-
T Consensus 128 ~~AI~YCHqLHVVHRDLKPENVVFFEK-lGlVKLTDFGFSNkf~PG~kL 175 (864)
T KOG4717|consen 128 VHAISYCHQLHVVHRDLKPENVVFFEK-LGLVKLTDFGFSNKFQPGKKL 175 (864)
T ss_pred HHHHHHHhhhhhhcccCCcceeEEeee-cCceEeeeccccccCCCcchh
Confidence 1 233345679999999999988753 588999999999887655443
No 406
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.02 E-value=1.2e-10 Score=124.67 Aligned_cols=79 Identities=15% Similarity=0.190 Sum_probs=60.0
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
.++.++..|||.|+.++.+.---..++....+-..+-+.+ +..+|..+++|||+|.||||++- +|.|.|.|||.+.
T Consensus 101 enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tl--dGdirLADFGVSA 178 (1187)
T KOG0579|consen 101 ENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTL--DGDIRLADFGVSA 178 (1187)
T ss_pred cCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEe--cCcEeeecccccc
Confidence 6778999999999998876432334454444433333333 78889999999999999999995 5899999999977
Q ss_pred ccC
Q 005995 317 KLS 319 (666)
Q Consensus 317 ~l~ 319 (666)
...
T Consensus 179 Kn~ 181 (1187)
T KOG0579|consen 179 KNK 181 (1187)
T ss_pred cch
Confidence 653
No 407
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.02 E-value=6.3e-10 Score=111.18 Aligned_cols=79 Identities=22% Similarity=0.315 Sum_probs=60.3
Q ss_pred CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 240 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
...+++|||++|.+|.++.... ...+...+...+.++. +..+|..|++|+|++|.||+++. ++.++|+|||.+..
T Consensus 60 ~~~~l~~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~--~~~~~l~d~~~~~~ 136 (244)
T smart00220 60 DKLYLVMEYCDGGDLFDLLKKR-GRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDE--DGHVKLADFGLARQ 136 (244)
T ss_pred CEEEEEEeCCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECC--CCcEEEccccceee
Confidence 5568999999999888764321 1245555555544443 67889999999999999999984 58999999999988
Q ss_pred cCHH
Q 005995 318 LSSS 321 (666)
Q Consensus 318 l~~~ 321 (666)
+...
T Consensus 137 ~~~~ 140 (244)
T smart00220 137 LDPG 140 (244)
T ss_pred eccc
Confidence 7654
No 408
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.99 E-value=8.9e-11 Score=113.07 Aligned_cols=77 Identities=18% Similarity=0.235 Sum_probs=50.8
Q ss_pred CCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 241 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
.-+|||.+|+- .|.-+..-....+....+-..+-.+. +..||+..++|||+||.|+|++ .+|.++|.|||+++.+
T Consensus 98 t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt--~dgilklADFGlar~f 174 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLIT--KDGILKLADFGLARAF 174 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEc--CCceEEeeccccccce
Confidence 35899999974 11111111111233333322222222 7789999999999999999999 5689999999999877
Q ss_pred CH
Q 005995 319 SS 320 (666)
Q Consensus 319 ~~ 320 (666)
+.
T Consensus 175 s~ 176 (376)
T KOG0669|consen 175 ST 176 (376)
T ss_pred ec
Confidence 53
No 409
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.99 E-value=8.9e-10 Score=117.21 Aligned_cols=76 Identities=18% Similarity=0.283 Sum_probs=54.3
Q ss_pred CCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 241 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
..+++|||++| +|.+... ....++...+...+.+++ +..+|..|++|+|++|.||+++ .++.++|+|||++...
T Consensus 83 ~~~lv~e~~~~-~L~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~--~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 83 DVYIVYELMDT-DLHQIIR-SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN--ANCDLKICDFGLARTT 158 (337)
T ss_pred cEEEEEeCCCC-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc--CCCCEEECcCcccccc
Confidence 45899999975 4544321 112344444444444443 6788999999999999999998 4588999999998766
Q ss_pred CH
Q 005995 319 SS 320 (666)
Q Consensus 319 ~~ 320 (666)
..
T Consensus 159 ~~ 160 (337)
T cd07858 159 SE 160 (337)
T ss_pred CC
Confidence 43
No 410
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=98.98 E-value=2.6e-09 Score=112.22 Aligned_cols=79 Identities=14% Similarity=0.143 Sum_probs=58.7
Q ss_pred cCCCeeEeeecCCccCCChhhHH-HcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~-~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~ 315 (666)
....+++|||++|+++.++.... ....+...+...+.+++ +..+|..|++|+|+||+||+++. ++.+++.|||.+
T Consensus 71 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~--~~~~kl~d~~~~ 148 (314)
T cd08216 71 DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSG--DGKVVLSGLRYS 148 (314)
T ss_pred CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEec--CCceEEecCccc
Confidence 44568999999999988764322 12344444444444433 67889999999999999999984 589999999988
Q ss_pred cccC
Q 005995 316 KKLS 319 (666)
Q Consensus 316 ~~l~ 319 (666)
..+.
T Consensus 149 ~~~~ 152 (314)
T cd08216 149 VSMI 152 (314)
T ss_pred eeec
Confidence 7653
No 411
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.97 E-value=4.4e-10 Score=129.64 Aligned_cols=138 Identities=14% Similarity=0.155 Sum_probs=88.2
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeC--CChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQH--QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~--p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 200 (666)
.-||.|-||+||-|... +|+-.|||-.+ |+..+ .+.. ..+
T Consensus 1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k---------------------------~~~~----------i~e 1283 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHK---------------------------TFKL----------IAE 1283 (1509)
T ss_pred cccCCcceeeeEEeecCCccchhhhhhhhcCccccc---------------------------cCcc----------hHH
Confidence 67999999999999964 79999999432 11100 0011 112
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHH----
Q 005995 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI---- 274 (666)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l---- 274 (666)
|...++.+.| ++++-+.-.. ..+..|-||||+|++|.++.+.. ++. .+.+...
T Consensus 1284 Em~vlE~lnH------------------pNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~g--ri~-dE~vt~vyt~q 1342 (1509)
T KOG4645|consen 1284 EMKVLEGLNH------------------PNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHG--RIE-DEMVTRVYTKQ 1342 (1509)
T ss_pred HHHHHHhccC------------------ccccccCceeecHHHHHHHHHHhccCcHHHHHHhc--chh-hhhHHHHHHHH
Confidence 4455555544 2222221111 34457899999999999975432 111 1111111
Q ss_pred HHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 275 TRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 275 ~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+-.-+..+|++|||||||||.||+++. +|-|++.|||++..+...
T Consensus 1343 ll~gla~LH~~gIVHRDIK~aNI~Ld~--~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1343 LLEGLAYLHEHGIVHRDIKPANILLDF--NGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHHHHHHHHhcCceecCCCccceeeec--CCcEEeecccceeEecCc
Confidence 111266789999999999999999994 589999999999988654
No 412
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=98.96 E-value=6.9e-10 Score=108.17 Aligned_cols=156 Identities=14% Similarity=0.204 Sum_probs=97.0
Q ss_pred cccccCc-cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchh
Q 005995 117 MFMDFVE-TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 194 (666)
Q Consensus 117 ~f~~~~~-~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~ 194 (666)
.|..+++ +-+|.|..+.|.|+..+ +|.+.|+|+..-...... + +-..++.+...+
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~------------------~-----e~~~~~~EaT~~ 71 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTES------------------G-----ETPYEMREATRQ 71 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccC------------------C-----ccHHHHHHHHHH
Confidence 3444443 56899999999998865 788999998642211100 0 002333333333
Q ss_pred hhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcc-eeeeeeee-cCCCeeEeeecCCccCCChhhHHHcCCCHH---H
Q 005995 195 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQ---K 269 (666)
Q Consensus 195 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vP~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~---~ 269 (666)
|++ . +++.. ++|. +.+-.+|. ++--+||.|.++-+.|-|+... .-.++.+ +
T Consensus 72 Ev~------I---LRqv~--------------GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts-~VtlSEK~tR~ 127 (411)
T KOG0599|consen 72 EIS------I---LRQVM--------------GHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTS-KVTLSEKETRR 127 (411)
T ss_pred HHH------H---HHHhc--------------CCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhh-heeecHHHHHH
Confidence 333 2 23322 2222 33444554 3455799999998888887431 1222333 3
Q ss_pred HHHHHHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHH
Q 005995 270 VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (666)
Q Consensus 270 ~~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~ 322 (666)
+.+.+.+. ...+|..+++|||+||.|||+++ +.+|+|.|||.++.+.+..
T Consensus 128 iMrqlfeg-VeylHa~~IVHRDLKpENILldd--n~~i~isDFGFa~~l~~Ge 177 (411)
T KOG0599|consen 128 IMRQLFEG-VEYLHARNIVHRDLKPENILLDD--NMNIKISDFGFACQLEPGE 177 (411)
T ss_pred HHHHHHHH-HHHHHHhhhhhcccChhheeecc--ccceEEeccceeeccCCch
Confidence 33333332 66789999999999999999994 5899999999999997654
No 413
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.95 E-value=5.5e-10 Score=128.19 Aligned_cols=74 Identities=19% Similarity=0.297 Sum_probs=53.1
Q ss_pred eeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 243 VLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 243 vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
++-||||+-..+.++..-+...-++...-....+++ +.+||..|+||||+||.||+++ +++.++|.|||++..+
T Consensus 672 YIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd--~~~~VKIGDFGLAt~~ 747 (1351)
T KOG1035|consen 672 YIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLD--SRNSVKIGDFGLATDL 747 (1351)
T ss_pred EEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEc--CCCCeeecccccchhh
Confidence 688999998777776432222112333222222232 7789999999999999999999 4689999999999864
No 414
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.95 E-value=1.3e-08 Score=103.76 Aligned_cols=101 Identities=11% Similarity=0.069 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeee--eec-------CCCeeEeeecCCc-cCCChhhHH-HcCCC
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV--IQS-------SETVLILEFMDGI-RLNDCESLE-AFGVN 266 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~--~~~-------~~~vLvmE~i~G~-~L~~~~~~~-~~~~~ 266 (666)
+.+|.+++.++... ++.+|.+ +.. .+.+||||+++|. +|.++..-. ....+
T Consensus 75 a~rE~~~l~~L~~~------------------GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~ 136 (268)
T PRK15123 75 ADREWRAIHRLHEV------------------GVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPD 136 (268)
T ss_pred HHHHHHHHHHHHHc------------------CCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCC
Confidence 56788999998772 5777777 321 2368999999996 676653210 11112
Q ss_pred H---HHHHHHHHHHHHHHhhhcCccccCCCcCceEEee-----CCCCceEEEecccccc
Q 005995 267 K---QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSK-----DPPHRPILLDFGLTKK 317 (666)
Q Consensus 267 ~---~~~~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~-----~~~~~i~liDFG~~~~ 317 (666)
. ..+...+. .++.++|..|++|+|++|+|||++. +++.++.||||+.+..
T Consensus 137 ~~~~~~ll~~la-~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 137 PRLKRMLIKRVA-TMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHHHHHHHHHH-HHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 1 22333332 3477899999999999999999984 2246899999998853
No 415
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.94 E-value=1.1e-09 Score=111.68 Aligned_cols=77 Identities=17% Similarity=0.229 Sum_probs=56.2
Q ss_pred cCCCeeEeeecCCccCCChhhH---HHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecc
Q 005995 239 SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 313 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~---~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG 313 (666)
.+..++||||++|.+|.+.... ....++...+...+.++. +..+|..|++|+|++|.||+++ ++.++|+|||
T Consensus 74 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~---~~~~~l~d~g 150 (260)
T cd08222 74 RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK---NNLLKIGDFG 150 (260)
T ss_pred CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee---cCCEeecccC
Confidence 3456899999999998776432 112344444444444433 6788999999999999999997 3579999999
Q ss_pred ccccc
Q 005995 314 LTKKL 318 (666)
Q Consensus 314 ~~~~l 318 (666)
.+..+
T Consensus 151 ~~~~~ 155 (260)
T cd08222 151 VSRLL 155 (260)
T ss_pred ceeec
Confidence 88665
No 416
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.92 E-value=6.2e-09 Score=103.36 Aligned_cols=145 Identities=21% Similarity=0.256 Sum_probs=89.7
Q ss_pred ccccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
-+|++.|..++||+.+..+|+.++||+.+++.... ...++..|+
T Consensus 3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~------------------------------------~~~~~~~E~ 46 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLP------------------------------------SAHDVAREY 46 (223)
T ss_pred ceecCCCccceEEEEEecCCcceEEEeCCCcccCc------------------------------------ccccHHHHH
Confidence 46899999999999998777999999865432100 111355677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-c-C-----CCeeEeeecCCccCCChhh--------H----HH-
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S-S-----ETVLILEFMDGIRLNDCES--------L----EA- 262 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~-~-----~~vLvmE~i~G~~L~~~~~--------~----~~- 262 (666)
+.+..+++ .++.+|+++. + . ..+++|||++|.++.+... . ..
T Consensus 47 ~~~~~l~~------------------~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i 108 (223)
T cd05154 47 RVLRALAG------------------TGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARAL 108 (223)
T ss_pred HHHHHhhC------------------CCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHHH
Confidence 77777654 1456788765 1 2 3489999999998876421 0 00
Q ss_pred -------cCCCH----------------HHHH---HHH----------HHHHHHHh-------hhcCccccCCCcCceEE
Q 005995 263 -------FGVNK----------------QKVV---EEI----------TRAYAHQI-------YVDGFFNGDPHPGNFLV 299 (666)
Q Consensus 263 -------~~~~~----------------~~~~---~~l----------~~~~l~~i-------~~~g~~H~D~hPgNilv 299 (666)
+..+. ..+. +.+ +......+ ...+++|+|+||+||++
T Consensus 109 ~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~ 188 (223)
T cd05154 109 ADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLF 188 (223)
T ss_pred HHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEE
Confidence 00000 0000 000 00001111 13689999999999999
Q ss_pred eeCCCCceEEEecccccccCHH
Q 005995 300 SKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 300 ~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+.+.++.+.||||+.++.-++.
T Consensus 189 ~~~~~~~~~iID~e~~~~g~~~ 210 (223)
T cd05154 189 HPDEPRVVAVLDWELATLGDPL 210 (223)
T ss_pred cCCCCcEEEEEeccccccCChH
Confidence 8421356789999998865543
No 417
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=98.91 E-value=4e-09 Score=108.96 Aligned_cols=92 Identities=17% Similarity=0.206 Sum_probs=60.3
Q ss_pred eeeeeeee-----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhh--cCccccCCCcCceEEee
Q 005995 231 VLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYV--DGFFNGDPHPGNFLVSK 301 (666)
Q Consensus 231 ~~vP~~~~-----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~--~g~~H~D~hPgNilv~~ 301 (666)
..|.+.|. ...-+-|+|||+|..|+-+.+-. .-++.++...++++++ +..+-+ .-|+|-|+||||||+-.
T Consensus 527 pRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~ 605 (775)
T KOG1151|consen 527 PRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVN 605 (775)
T ss_pred ceeeeeeeeeeeccccceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEec
Confidence 34445553 44568899999999988664322 1233344444444433 333333 57999999999999863
Q ss_pred C-CCCceEEEecccccccCHHHH
Q 005995 302 D-PPHRPILLDFGLTKKLSSSMK 323 (666)
Q Consensus 302 ~-~~~~i~liDFG~~~~l~~~~~ 323 (666)
. .-|.|+|.|||+++.++++..
T Consensus 606 GtacGeIKITDFGLSKIMdddSy 628 (775)
T KOG1151|consen 606 GTACGEIKITDFGLSKIMDDDSY 628 (775)
T ss_pred CcccceeEeeecchhhhccCCcc
Confidence 1 237899999999998876543
No 418
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.90 E-value=9.3e-10 Score=112.68 Aligned_cols=141 Identities=13% Similarity=0.147 Sum_probs=83.9
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
..||.||||.|-.|..+ +.+-.||||++.++--+ ..|.+.-..--+.++. +. ..
T Consensus 355 ~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQ-dDDvectm~EKrvLAL--~~----------------------kp 409 (683)
T KOG0696|consen 355 MVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQ-DDDVECTMVEKRVLAL--PG----------------------KP 409 (683)
T ss_pred EEeccCccceeeeecccCcchhhhhhhhccceeee-cCcccceehhhhheec--CC----------------------CC
Confidence 57999999999999876 45678999988765321 0111100000000000 00 00
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcC-CC--HHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFG-VN--KQKVVEEITRAYA 279 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~-~~--~~~~~~~l~~~~l 279 (666)
.-+.++...|+. -.+.+.||||+.|+.|-=- +.+.| +. ...+...-+.+-+
T Consensus 410 pFL~qlHScFQT------------------------mDRLyFVMEyvnGGDLMyh--iQQ~GkFKEp~AvFYAaEiaigL 463 (683)
T KOG0696|consen 410 PFLVQLHSCFQT------------------------MDRLYFVMEYVNGGDLMYH--IQQVGKFKEPVAVFYAAEIAIGL 463 (683)
T ss_pred chHHHHHHHhhh------------------------hhheeeEEEEecCchhhhH--HHHhcccCCchhhhhhHHHHHHh
Confidence 122233333321 2455899999999887532 22222 11 1111111222235
Q ss_pred HHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 280 ~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
-.+|..||+.||+|-.|||++ .+|.|+|.||||+++
T Consensus 464 FFLh~kgIiYRDLKLDNvmLd--~eGHiKi~DFGmcKE 499 (683)
T KOG0696|consen 464 FFLHSKGIIYRDLKLDNVMLD--SEGHIKIADFGMCKE 499 (683)
T ss_pred hhhhcCCeeeeeccccceEec--cCCceEeeecccccc
Confidence 668899999999999999999 569999999999986
No 419
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.88 E-value=7.3e-09 Score=107.63 Aligned_cols=143 Identities=15% Similarity=0.163 Sum_probs=93.4
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+-||+|-||.|++|.++ |+.|||||...--+..-.++-++...++ ++. +
T Consensus 217 e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE~SWfrEtEIYqTvm----------------------------LRH--E 265 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDERSWFRETEIYQTVM----------------------------LRH--E 265 (513)
T ss_pred EEecCccccceeecccc-CCceEEEEecccchhhhhhHHHHHHHHH----------------------------hcc--c
Confidence 46999999999999995 9999999975433332222222211110 011 1
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQ 281 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~ 281 (666)
|+-.|-.. + +... -..++.+||++|-+-++|.|+ +.+.-++.+........+. +.+
T Consensus 266 NILgFIaa----D-------~~~~---------gs~TQLwLvTdYHe~GSL~Dy--L~r~tv~~~~ml~LalS~AsGLaH 323 (513)
T KOG2052|consen 266 NILGFIAA----D-------NKDN---------GSWTQLWLVTDYHEHGSLYDY--LNRNTVTTEGMLKLALSIASGLAH 323 (513)
T ss_pred hhhhhhhc----c-------ccCC---------CceEEEEEeeecccCCcHHHH--HhhccCCHHHHHHHHHHHhhhHHH
Confidence 22222110 0 0000 015778999999999999998 4556677666655544433 555
Q ss_pred hhh--------cCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 282 IYV--------DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 282 i~~--------~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
+|- -.+-|||+|.-||||. .+|.-.|.|+|++-..+..
T Consensus 324 LH~eI~GTqgKPaIAHRDlKSKNILVK--kn~~C~IADLGLAv~h~~~ 369 (513)
T KOG2052|consen 324 LHMEIVGTQGKPAIAHRDLKSKNILVK--KNGTCCIADLGLAVRHDSD 369 (513)
T ss_pred HHHHHhcCCCCchhhccccccccEEEc--cCCcEEEeeceeeEEeccc
Confidence 553 4699999999999998 5689999999998876543
No 420
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=98.86 E-value=2.8e-09 Score=118.26 Aligned_cols=138 Identities=24% Similarity=0.303 Sum_probs=87.3
Q ss_pred Cccccccceeee-eEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHH
Q 005995 122 VETPLATASIAQ-VHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (666)
Q Consensus 122 ~~~pi~sgs~gq-V~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 200 (666)
.++-+|.||-|. ||+|.. +|++||||- ++.++.....+|++..+
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKr----------------------------------ll~e~~~~A~rEi~lL~ 557 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVY-EGREVAVKR----------------------------------LLEEFFDFAQREIQLLQ 557 (903)
T ss_pred cHHHcccCCCCcEEEEEee-CCceehHHH----------------------------------HhhHhHHHHHHHHHHHH
Confidence 345677888775 799987 799999992 22333333345554444
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--c--CCCeeEeeecCCccCCChhhHH-----HcC-CCHHHH
Q 005995 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--S--SETVLILEFMDGIRLNDCESLE-----AFG-VNKQKV 270 (666)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~--~~~vLvmE~i~G~~L~~~~~~~-----~~~-~~~~~~ 270 (666)
|.. .+..|-+.|. . .-.+++.|.|. .+|.|+.+.. ..+ +++..+
T Consensus 558 eSD-------------------------~H~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~ 611 (903)
T KOG1027|consen 558 ESD-------------------------EHPNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISV 611 (903)
T ss_pred hcc-------------------------CCCceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHHH
Confidence 421 1334445553 2 22478999885 4666664331 011 233333
Q ss_pred HHHHHHHHHHHhhhcCccccCCCcCceEEee---CCCCceEEEecccccccCHH
Q 005995 271 VEEITRAYAHQIYVDGFFNGDPHPGNFLVSK---DPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 271 ~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~---~~~~~i~liDFG~~~~l~~~ 321 (666)
...++. -+.++|..+++|||+||.||||.- ++..+++|.|||+++.++..
T Consensus 612 l~q~~~-GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~ 664 (903)
T KOG1027|consen 612 LSQIAS-GLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGG 664 (903)
T ss_pred HHHHHH-HHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCC
Confidence 333333 277899999999999999999985 22356789999999999653
No 421
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=98.85 E-value=3.7e-09 Score=114.66 Aligned_cols=79 Identities=22% Similarity=0.235 Sum_probs=57.1
Q ss_pred CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHH--HHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA--YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 240 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~--~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
...++|||.+.|.-+-+.. .............+.++ .+..+|.+|+||||+||+|||++ +.+|+|.|+|||..+.
T Consensus 389 ~~~~~v~e~l~g~ell~ri--~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~-~~~g~lrltyFG~a~~ 465 (612)
T KOG0603|consen 389 KEIYLVMELLDGGELLRRI--RSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD-GSAGHLRLTYFGFWSE 465 (612)
T ss_pred ceeeeeehhccccHHHHHH--HhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec-CCCCcEEEEEechhhh
Confidence 4458999999997665432 22222223333334333 37889999999999999999995 2468999999999999
Q ss_pred cCHH
Q 005995 318 LSSS 321 (666)
Q Consensus 318 l~~~ 321 (666)
+.++
T Consensus 466 ~~~~ 469 (612)
T KOG0603|consen 466 LERS 469 (612)
T ss_pred Cchh
Confidence 8776
No 422
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=98.85 E-value=5.2e-09 Score=108.75 Aligned_cols=145 Identities=17% Similarity=0.158 Sum_probs=100.9
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
.-||.|+||.||-++.+ +|+-.|.|-+. -+-++ + -..|.--.+|.
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~----------KKRiK---k---------------------r~ge~maLnEk 236 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLD----------KKRIK---K---------------------RKGETMALNEK 236 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHH----------HHHHH---H---------------------hhhhHHhhHHH
Confidence 57999999999999866 78888888321 10000 0 00111234466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---cCCCeeEeeecCCccCCChh-hHHHcCCCHHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCE-SLEAFGVNKQKVVEEITRAY 278 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---~~~~vLvmE~i~G~~L~~~~-~~~~~~~~~~~~~~~l~~~~ 278 (666)
..++++.. ++.|--.|. ....+|||..+.|+.|.=-. .+...+++..+..--.++++
T Consensus 237 ~iL~kV~s-------------------~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~ 297 (591)
T KOG0986|consen 237 QILEKVSS-------------------PFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEII 297 (591)
T ss_pred HHHHHhcc-------------------CcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHH
Confidence 66666533 344444443 45679999999999886322 22334677777666666655
Q ss_pred --HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHH
Q 005995 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (666)
Q Consensus 279 --l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~ 323 (666)
++++|..++|.||+||.|||+| +.|.+.|.|.|++..+++...
T Consensus 298 cGLehlH~~~iVYRDLKPeNILLD--d~GhvRISDLGLAvei~~g~~ 342 (591)
T KOG0986|consen 298 CGLEHLHRRRIVYRDLKPENILLD--DHGHVRISDLGLAVEIPEGKP 342 (591)
T ss_pred hhHHHHHhcceeeccCChhheeec--cCCCeEeeccceEEecCCCCc
Confidence 8999999999999999999999 459999999999999987543
No 423
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.85 E-value=7.5e-09 Score=103.23 Aligned_cols=145 Identities=16% Similarity=0.154 Sum_probs=91.2
Q ss_pred cccC-ccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhh
Q 005995 119 MDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (666)
Q Consensus 119 ~~~~-~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 196 (666)
.+|| -+-+|.|.||.|-.++-+ +|+-.|+||++.++- +..|- +++.
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKevi--iakdE-----VAHT------------------------- 215 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVI--IAKDE-----VAHT------------------------- 215 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhhe--eehHH-----hhhh-------------------------
Confidence 3444 367999999999999865 899999999876542 11110 1111
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeee-ee-cCCCeeEeeecCCccCCChhhH-HHcCCCHHHHHHH
Q 005995 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV-IQ-SSETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEE 273 (666)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~-~~-~~~~vLvmE~i~G~~L~~~~~~-~~~~~~~~~~~~~ 273 (666)
..|-+.+...+|-|- .--+. +. ..+.+.||||..|+.|.--..- +...-++.++-..
T Consensus 216 --lTE~RVL~~~~HPFL------------------t~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGa 275 (516)
T KOG0690|consen 216 --LTENRVLQNCRHPFL------------------TSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGA 275 (516)
T ss_pred --hhHHHHHHhccCcHH------------------HHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhH
Confidence 113334443333211 00000 01 3445899999999987643211 1111233333333
Q ss_pred HHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 274 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 274 l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
-+-..+..+|..+++.||+|-.|+|++ .||.|++.|||+|++
T Consensus 276 EIvsAL~YLHs~~ivYRDlKLENLlLD--kDGHIKitDFGLCKE 317 (516)
T KOG0690|consen 276 EIVSALGYLHSRNIVYRDLKLENLLLD--KDGHIKITDFGLCKE 317 (516)
T ss_pred HHHHHhhhhhhCCeeeeechhhhheec--cCCceEeeecccchh
Confidence 333458889999999999999999999 469999999999985
No 424
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=98.82 E-value=2.6e-09 Score=105.61 Aligned_cols=141 Identities=18% Similarity=0.194 Sum_probs=92.5
Q ss_pred cCccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHH
Q 005995 121 FVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (666)
Q Consensus 121 ~~~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 199 (666)
++.+-||.|--|.|-.+..+ +|+..|+||++-.-..+.+-|+ +|....+
T Consensus 65 is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeL-------Hw~~s~h----------------------- 114 (400)
T KOG0604|consen 65 ISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVEL-------HWMASGH----------------------- 114 (400)
T ss_pred ehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhh-------hhhhcCC-----------------------
Confidence 45578999999999999865 8999999987532221111111 1111111
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---cCC--CeeEeeecCCccCCChhhHHHc-CCCHHHHHHH
Q 005995 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSE--TVLILEFMDGIRLNDCESLEAF-GVNKQKVVEE 273 (666)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---~~~--~vLvmE~i~G~~L~~~~~~~~~-~~~~~~~~~~ 273 (666)
..-|.|-.||. .+. ..+|||.++|+.|-....-+.. .+..++.++.
T Consensus 115 ----------------------------~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI 166 (400)
T KOG0604|consen 115 ----------------------------PHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEI 166 (400)
T ss_pred ----------------------------CceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHH
Confidence 11244555554 122 3579999999988765332221 2455666666
Q ss_pred HHHHH--HHHhhhcCccccCCCcCceEEeeC-CCCceEEEecccccccC
Q 005995 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLS 319 (666)
Q Consensus 274 l~~~~--l~~i~~~g~~H~D~hPgNilv~~~-~~~~i~liDFG~~~~l~ 319 (666)
+-++. +.++|..+|-|||+||.|+|.... ++.-++|.|||++++-.
T Consensus 167 ~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 167 MKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred HHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccC
Confidence 55543 788999999999999999999743 34568999999998754
No 425
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.82 E-value=1.5e-09 Score=117.41 Aligned_cols=80 Identities=15% Similarity=0.241 Sum_probs=61.5
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
..+.+++||||.|++|.+..... ..+...+++...-+.. ++.+|..|=+|||+|-+||++++ .|.+++.|||.++
T Consensus 84 ~dklwicMEycgggslQdiy~~T-gplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd--~gDvklaDfgvsa 160 (829)
T KOG0576|consen 84 RDKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTD--EGDVKLADFGVSA 160 (829)
T ss_pred hcCcEEEEEecCCCcccceeeec-ccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecc--cCceeecccCchh
Confidence 35568999999999999874322 2233445555444444 78889999999999999999994 5889999999999
Q ss_pred ccCHH
Q 005995 317 KLSSS 321 (666)
Q Consensus 317 ~l~~~ 321 (666)
.++..
T Consensus 161 qitat 165 (829)
T KOG0576|consen 161 QITAT 165 (829)
T ss_pred hhhhh
Confidence 88643
No 426
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.81 E-value=1.4e-08 Score=101.17 Aligned_cols=139 Identities=17% Similarity=0.217 Sum_probs=87.9
Q ss_pred CccccccceeeeeEEEE-ecCCCEEEEEeeC--CC-hHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 122 VETPLATASIAQVHRAT-LVDGRQVVVKVQH--QG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 122 ~~~pi~sgs~gqV~~a~-l~~g~~VAVKv~~--p~-~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
..+-+|+|.+|.|--++ +.+|.+.||||+. |+ .+.++-++..++...
T Consensus 82 t~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~C----------------------------- 132 (463)
T KOG0607|consen 82 TSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQC----------------------------- 132 (463)
T ss_pred HHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHh-----------------------------
Confidence 44689999999999998 4699999999864 33 222222222211100
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHH--
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT-- 275 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~-- 275 (666)
.--.|+-++-+.|++ .++-+||||-+.|++|-.-.. ++..++..+....+-
T Consensus 133 --qgh~nilqLiefFEd------------------------d~~FYLVfEKm~GGplLshI~-~~~~F~E~EAs~vvkdi 185 (463)
T KOG0607|consen 133 --QGHKNILQLIEFFED------------------------DTRFYLVFEKMRGGPLLSHIQ-KRKHFNEREASRVVKDI 185 (463)
T ss_pred --cCCccHHHHHHHhcc------------------------cceEEEEEecccCchHHHHHH-HhhhccHHHHHHHHHHH
Confidence 001244444444431 456689999999999865432 222344333333222
Q ss_pred HHHHHHhhhcCccccCCCcCceEEeeCCC--CceEEEecccccc
Q 005995 276 RAYAHQIYVDGFFNGDPHPGNFLVSKDPP--HRPILLDFGLTKK 317 (666)
Q Consensus 276 ~~~l~~i~~~g~~H~D~hPgNilv~~~~~--~~i~liDFG~~~~ 317 (666)
...+..+|..||-|||+||.|||... ++ ..++|+||-+..-
T Consensus 186 a~aLdFlH~kgIAHRDlKPENiLC~~-pn~vsPvKiCDfDLgSg 228 (463)
T KOG0607|consen 186 ASALDFLHTKGIAHRDLKPENILCES-PNKVSPVKICDFDLGSG 228 (463)
T ss_pred HHHHHHHhhcCcccccCCccceeecC-CCCcCceeeeccccccc
Confidence 23488899999999999999999873 22 3478999977543
No 427
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=98.80 E-value=3.5e-09 Score=116.94 Aligned_cols=142 Identities=20% Similarity=0.198 Sum_probs=104.7
Q ss_pred cccccceeeeeEEEEe-cCCC----EEEEEeeCC--ChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhh
Q 005995 124 TPLATASIAQVHRATL-VDGR----QVVVKVQHQ--GIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l-~~g~----~VAVKv~~p--~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 196 (666)
.-||+|.||.||+|.+ ..|+ +|||||... +.....
T Consensus 702 kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~-------------------------------------- 743 (1177)
T KOG1025|consen 702 KVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASI-------------------------------------- 743 (1177)
T ss_pred ceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhH--------------------------------------
Confidence 5699999999999986 3554 789998743 222111
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHH
Q 005995 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (666)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~ 273 (666)
.+..||-++.++.| .++-++.. .+..-||++|++++.|.|.....+..+..+.++..
T Consensus 744 e~LdeAl~masldH--------------------pnl~RLLgvc~~s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw 803 (1177)
T KOG1025|consen 744 ELLDEALRMASLDH--------------------PNLLRLLGVCMLSTLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNW 803 (1177)
T ss_pred HHHHHHHHHhcCCC--------------------chHHHHhhhcccchHHHHHHhcccchHHHHHHHhhccccHHHHHHH
Confidence 13334544444332 22222222 34567999999999999998888888888888888
Q ss_pred HHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHH
Q 005995 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQA 325 (666)
Q Consensus 274 l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~ 325 (666)
..++. +..+++.+++|||+-..||||.. ...+++.|||+++-+.++..+.
T Consensus 804 ~~QIAkgM~YLe~qrlVHrdLaaRNVLVks--P~hvkitdfgla~ll~~d~~ey 855 (1177)
T KOG1025|consen 804 CYQIAKGMKYLEEQRLVHRDLAARNVLVKS--PNHVKITDFGLAKLLAPDEKEY 855 (1177)
T ss_pred HHHHHHHHHHHHhcchhhhhhhhhheeecC--CCeEEEEecchhhccCcccccc
Confidence 88876 88888999999999999999983 4689999999999887766554
No 428
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.79 E-value=1.1e-08 Score=98.92 Aligned_cols=79 Identities=19% Similarity=0.229 Sum_probs=60.5
Q ss_pred cCCCeeEeeecCCccCCChhhHH---HcCCCHHHHHHHHHHHH--HHHhhhcC--ccccCCCcCceEEeeCCCCceEEEe
Q 005995 239 SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLD 311 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~---~~~~~~~~~~~~l~~~~--l~~i~~~g--~~H~D~hPgNilv~~~~~~~i~liD 311 (666)
+...+|+..|..-++|.+..... ..-++..++...+..++ ++++|+.. +.|+|+||+||++.+ ++.+++.|
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~--~~~~vl~D 172 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD--SGLPVLMD 172 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC--CCceEEEe
Confidence 34468999998777777654332 22355667777666665 89999988 999999999999984 58999999
Q ss_pred cccccccC
Q 005995 312 FGLTKKLS 319 (666)
Q Consensus 312 FG~~~~l~ 319 (666)
||.+...+
T Consensus 173 ~GS~~~a~ 180 (302)
T KOG2345|consen 173 LGSATQAP 180 (302)
T ss_pred ccCccccc
Confidence 99988654
No 429
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=98.78 E-value=2.4e-08 Score=106.74 Aligned_cols=76 Identities=20% Similarity=0.211 Sum_probs=50.7
Q ss_pred CCCeeEeeec-CCccCCChhhHHHcCCCHHH--HHHHHHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 240 SETVLILEFM-DGIRLNDCESLEAFGVNKQK--VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 240 ~~~vLvmE~i-~G~~L~~~~~~~~~~~~~~~--~~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
...+|+||-- +|+.|-++..... .++..+ +.-.-+.+-.+++|..|++|||+|-.|++|+ ++|-++|||||.+.
T Consensus 642 d~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd--~~g~~klidfgsaa 718 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVD--SNGFVKLIDFGSAA 718 (772)
T ss_pred CeeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhccccccccCceecccccccEEEe--cCCeEEEeeccchh
Confidence 3447888853 4566656543321 233222 2222223347788999999999999999999 67999999999875
Q ss_pred cc
Q 005995 317 KL 318 (666)
Q Consensus 317 ~l 318 (666)
..
T Consensus 719 ~~ 720 (772)
T KOG1152|consen 719 YT 720 (772)
T ss_pred hh
Confidence 43
No 430
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.78 E-value=5.8e-10 Score=107.17 Aligned_cols=134 Identities=19% Similarity=0.244 Sum_probs=84.3
Q ss_pred ccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
-||.|.|+.|+|+... +|+..|+|+..-.. + . ..++ + ++.+|++
T Consensus 18 ~igkG~FSvVrRc~~~~tg~~fa~kiin~~k-------------~----~----~~~~------------e--~l~rEar 62 (355)
T KOG0033|consen 18 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-------------L----S----ARDF------------Q--KLEREAR 62 (355)
T ss_pred HHccCchHHHHHHHhccchHHHHHHHhhhhh-------------h----c----cccH------------H--HHHHHHH
Confidence 4899999999999864 89999998642110 0 0 0011 1 1345665
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH-
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~- 278 (666)
....++| .+|.++.. .+-++||.|+++|..|-.-.. .+ .-..+..+.-+
T Consensus 63 IC~~LqH--------------------P~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV-~R-----~~ySEa~aSH~~ 116 (355)
T KOG0033|consen 63 ICRKLQH--------------------PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AR-----EFYSEADASHCI 116 (355)
T ss_pred HHHhcCC--------------------CcEeehhhhhcccceeEEEEecccchHHHHHHH-HH-----HHHHHHHHHHHH
Confidence 5444433 33444432 355789999999987753211 11 12222222222
Q ss_pred ------HHHhhhcCccccCCCcCceEEeeCCC-CceEEEecccccccC
Q 005995 279 ------AHQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLS 319 (666)
Q Consensus 279 ------l~~i~~~g~~H~D~hPgNilv~~~~~-~~i~liDFG~~~~l~ 319 (666)
+...|..||+|||+||.|+++....+ .-++|.|||++..++
T Consensus 117 rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 117 QQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred HHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 44556799999999999999975333 357899999999987
No 431
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.77 E-value=6.9e-09 Score=103.12 Aligned_cols=79 Identities=18% Similarity=0.270 Sum_probs=53.6
Q ss_pred CCeeEeeecCCccCCChhhHHH----cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeC--CCCceEEEec
Q 005995 241 ETVLILEFMDGIRLNDCESLEA----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDF 312 (666)
Q Consensus 241 ~~vLvmE~i~G~~L~~~~~~~~----~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~--~~~~i~liDF 312 (666)
..+|+.||.+- .|..+....+ ..+.+.-+-..+.+++ +..+|..=++|||+||.||||.-+ +.|+++|.|+
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 34789999874 3333332221 2334444444555554 667788889999999999999833 2389999999
Q ss_pred ccccccCH
Q 005995 313 GLTKKLSS 320 (666)
Q Consensus 313 G~~~~l~~ 320 (666)
|+++.+..
T Consensus 181 GlaR~~~~ 188 (438)
T KOG0666|consen 181 GLARLFNN 188 (438)
T ss_pred cHHHHhhc
Confidence 99987643
No 432
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.77 E-value=7.4e-09 Score=115.86 Aligned_cols=137 Identities=20% Similarity=0.241 Sum_probs=100.3
Q ss_pred cccccceeeeeEEEEec------CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhc
Q 005995 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~------~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld 197 (666)
+-||.|.||.||+|+.. +-.-||||-++-....+ ...|
T Consensus 492 ~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~------------------------------------~~~d 535 (774)
T KOG1026|consen 492 EELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQ------------------------------------ARQD 535 (774)
T ss_pred hhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHH------------------------------------HHHH
Confidence 46999999999999964 23569999665443322 3346
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHc---------C
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF---------G 264 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~---------~ 264 (666)
|++||+-+..|.| ..|-+++. ....++|.||+.-++|.++...... .
T Consensus 536 F~REaeLla~l~H--------------------~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~ 595 (774)
T KOG1026|consen 536 FRREAELLAELQH--------------------PNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQD 595 (774)
T ss_pred HHHHHHHHHhccC--------------------CCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCC
Confidence 8889988887754 33445554 3456999999999999887543211 1
Q ss_pred ----CCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 265 ----VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 265 ----~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
++..+++....++. +..+-.+.||||||--.|.||.+ +..++|.|||+++.+
T Consensus 596 ~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge--~l~VKIsDfGLsRdi 653 (774)
T KOG1026|consen 596 TPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGE--NLVVKISDFGLSRDI 653 (774)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceecc--ceEEEecccccchhh
Confidence 34456666666655 66677899999999999999983 477899999999875
No 433
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=98.76 E-value=1.1e-08 Score=102.98 Aligned_cols=181 Identities=14% Similarity=0.244 Sum_probs=124.8
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
+-||-|.-+-||.+-..+|++.++|+.|-|--. ++.++.=-.... ......++ -..-+.-..|..
T Consensus 98 nqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtS-----FR~Vk~kRDY~r---~r~~~sWl-------yLSRlaa~kEfa 162 (465)
T KOG2268|consen 98 NQIGVGKESDIYVVADEEGNPLILKLHRLGRTS-----FRNVKNKRDYLR---KRKSGSWL-------YLSRLAATKEFA 162 (465)
T ss_pred cccccccccceEEEecCCCCchhHHHHhhhhhh-----HHHhhhhhhhHh---cCCccchh-------hhHHHHHHHHHH
Confidence 468999999999999989999999988765321 111111000000 00000000 011222455666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHHHHhh
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l~~i~ 283 (666)
.++.|.. .++.||+++.+++++.|||+++|.+|.++.. -.++..+...++.++. -+-
T Consensus 163 fmkaL~e------------------~gfpVPkpiD~~RH~Vvmelv~g~Pl~~v~~----v~d~~~ly~~lm~~Iv-~la 219 (465)
T KOG2268|consen 163 FMKALYE------------------RGFPVPKPIDHNRHCVVMELVDGYPLRQVRH----VEDPPTLYDDLMGLIV-RLA 219 (465)
T ss_pred HHHHHHH------------------cCCCCCCcccccceeeHHHhhcccceeeeee----cCChHHHHHHHHHHHH-HHH
Confidence 7777765 3688999999999999999999999988633 2356677777766543 456
Q ss_pred hcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHH-cCCc
Q 005995 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAE-MGLR 351 (666)
Q Consensus 284 ~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~~~l~~a~~~~d~~~~~~~~~~-~g~~ 351 (666)
.+|+||||-.--||||++ ++++++|||-.+...+...-+.| ..+|.+=+...|.+ .|..
T Consensus 220 ~~GlIHgDFNEFNimv~d--d~~i~vIDFPQmvS~sh~nA~~Y-------FdRDv~Ci~~fFrKkf~YE 279 (465)
T KOG2268|consen 220 NHGLIHGDFNEFNIMVKD--DDKIVVIDFPQMVSTSHPNAEYY-------FDRDVECIRAFFRKKFGYE 279 (465)
T ss_pred HcCceecccchheeEEec--CCCEEEeechHhhccCCCcccee-------ecccHHHHHHHHHHhcCCC
Confidence 799999999999999994 58899999999988887766555 56777777776653 4554
No 434
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=98.75 E-value=1.6e-08 Score=108.79 Aligned_cols=141 Identities=19% Similarity=0.180 Sum_probs=97.9
Q ss_pred cccccceeeeeEEEEecC---CC--EEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcH
Q 005995 124 TPLATASIAQVHRATLVD---GR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~---g~--~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~ 198 (666)
.-||.|-||.||+|+..+ |+ .||||.=+.+....- --.|
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~------------------------------------tekf 438 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDD------------------------------------TEKF 438 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCChhh------------------------------------HHHH
Confidence 579999999999999643 44 478886554322100 0026
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-c--CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHH
Q 005995 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (666)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~--~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~ 275 (666)
..||-.++.|.| .+|-+++. | ..-++|||.++-+.|..+...+...++...+.--..
T Consensus 439 lqEa~iMrnfdH--------------------phIikLIGv~~e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~ 498 (974)
T KOG4257|consen 439 LQEASIMRNFDH--------------------PHIIKLIGVCVEQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCY 498 (974)
T ss_pred HHHHHHHHhCCC--------------------cchhheeeeeeccceeEEEecccchhHHHHHHhccccchHHHHHHHHH
Confidence 678866666543 34445554 3 445899999998888877655555555544444444
Q ss_pred HHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHH
Q 005995 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (666)
Q Consensus 276 ~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~ 322 (666)
+++ +..++...||||||-..||||. ...-++|.|||+++.++++.
T Consensus 499 Qi~talaYLeSkrfVHRDIAaRNiLVs--Sp~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 499 QICTALAYLESKRFVHRDIAARNILVS--SPQCVKLADFGLSRYLEDDA 545 (974)
T ss_pred HHHHHHHHHHhhchhhhhhhhhheeec--Ccceeeecccchhhhccccc
Confidence 433 6677889999999999999998 34679999999999887654
No 435
>PRK10593 hypothetical protein; Provisional
Probab=98.71 E-value=1.3e-07 Score=98.51 Aligned_cols=93 Identities=15% Similarity=0.185 Sum_probs=67.0
Q ss_pred HHHHHHHHHHhCCChhccccccCccccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCC
Q 005995 100 QEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQY 179 (666)
Q Consensus 100 ~~~~~~l~~~~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~ 179 (666)
+.+++.+.+.+|..+.++ ++||.|.+++||+-...+| .+.||+.+......
T Consensus 2 ~~~~~~~~~~~~~~~~~~------~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~~~~---------------------- 52 (297)
T PRK10593 2 EQLRAELSHLLGEKLSRV------ECISEQPYAALWALYDSQG-NPMPLMARSFSTPG---------------------- 52 (297)
T ss_pred hHHHHHHHHHhchhhhee------eecCCccceeEEEEEcCCC-CEEEEEecccccch----------------------
Confidence 456777888888655543 7999999999999987556 57788864421110
Q ss_pred ChHHHHHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-c------CCCeeEeeecCCc
Q 005995 180 DFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S------SETVLILEFMDGI 252 (666)
Q Consensus 180 ~~~~~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~------~~~vLvmE~i~G~ 252 (666)
.+..|+++++.+++. ..+.||+|+. + +..+||||+++|.
T Consensus 53 -----------------~~~~Ea~~L~~L~~~-----------------~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~ 98 (297)
T PRK10593 53 -----------------VAQQEAWKLSMLARS-----------------GTVRMPTVYGVMTHEQSPGPDVLLLERLRGV 98 (297)
T ss_pred -----------------HHHHHHHHHHHHccC-----------------CCCCcCcEEEEeccCCcCCCeEEEEeccCCE
Confidence 155688888887652 2488999995 1 4479999999998
Q ss_pred cCC
Q 005995 253 RLN 255 (666)
Q Consensus 253 ~L~ 255 (666)
++.
T Consensus 99 ~~~ 101 (297)
T PRK10593 99 SVE 101 (297)
T ss_pred ecC
Confidence 773
No 436
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.71 E-value=4.4e-08 Score=96.48 Aligned_cols=103 Identities=21% Similarity=0.302 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--c------CCCeeEeeecCCc-cCCChhhHHHc--CCC
Q 005995 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--S------SETVLILEFMDGI-RLNDCESLEAF--GVN 266 (666)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~------~~~vLvmE~i~G~-~L~~~~~~~~~--~~~ 266 (666)
..+|.+++.++++ .++.+|+++. . .+.+|+||+++|. +|.++...... ...
T Consensus 58 a~~E~~~~~~L~~------------------~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~ 119 (206)
T PF06293_consen 58 AKREWRNLQRLRE------------------AGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQ 119 (206)
T ss_pred HHHHHHHHHHHHH------------------cCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhh
Confidence 5678889999887 2688888874 1 1248999999984 66665332000 111
Q ss_pred HHHHHHHHHHHHHHHhhhcCccccCCCcCceEEeeCC-CCceEEEecccccccC
Q 005995 267 KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLS 319 (666)
Q Consensus 267 ~~~~~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~-~~~i~liDFG~~~~l~ 319 (666)
...+...+.+ ++..+|..|++|+|++|+|||++.++ +.++.||||+-+..-.
T Consensus 120 ~~~ll~~l~~-~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 120 RRELLRALAR-LIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHHHHHHH-HHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 2344444443 47788999999999999999999542 2379999999887654
No 437
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.67 E-value=5.4e-08 Score=105.77 Aligned_cols=75 Identities=17% Similarity=0.134 Sum_probs=54.6
Q ss_pred eeEeeecCCccCCChhhHHHcCC--CHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 243 VLILEFMDGIRLNDCESLEAFGV--NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 243 vLvmE~i~G~~L~~~~~~~~~~~--~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
-+-||-++|++|+++....=..+ +...+.--.-+++ ++.+|+..|||||||-.|+||+.- .|-++|.|||-++++
T Consensus 648 kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTy-SGvlKISDFGTsKRL 726 (1226)
T KOG4279|consen 648 KIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTY-SGVLKISDFGTSKRL 726 (1226)
T ss_pred EEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeec-cceEEecccccchhh
Confidence 47899999999998754221111 2233333333333 677888999999999999999865 488999999999877
No 438
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.66 E-value=2.1e-07 Score=92.90 Aligned_cols=33 Identities=21% Similarity=0.249 Sum_probs=26.9
Q ss_pred cCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 285 ~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
..++|+|+||+||++++ ++ +.+|||+.++.=++
T Consensus 153 ~~~~HgD~~~~Nii~~~--~~-~~iIDwe~a~~Gdp 185 (226)
T TIGR02172 153 STCLHGDFQIGNLITSG--KG-TYWIDLGDFGYGNP 185 (226)
T ss_pred CceEecCCCCCcEEEcC--CC-cEEEechhcCcCCH
Confidence 46789999999999983 35 99999999875443
No 439
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=98.66 E-value=9.7e-08 Score=93.47 Aligned_cols=77 Identities=26% Similarity=0.320 Sum_probs=57.0
Q ss_pred CCCeeEeeecCCccCCChhhHHHcCCC---HHHHHHHHHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 240 SETVLILEFMDGIRLNDCESLEAFGVN---KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 240 ~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~~~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
+-.|.||||++-++|..-. ...|+. .+++.+.+.. .+..+|..++||||+|..||||-+.+.-+++|+|||...
T Consensus 95 d~YvF~qE~aP~gdL~snv--~~~GigE~~~K~v~~ql~S-Ai~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 95 DAYVFVQEFAPRGDLRSNV--EAAGIGEANTKKVFAQLLS-AIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred ceEEEeeccCccchhhhhc--CcccccHHHHHHHHHHHHH-HHHHhhccchhhcccccceEEEecCCccEEEeeeccccc
Confidence 4458999999988887642 233443 2344544444 367789999999999999999975445689999999988
Q ss_pred ccC
Q 005995 317 KLS 319 (666)
Q Consensus 317 ~l~ 319 (666)
...
T Consensus 172 k~g 174 (378)
T KOG1345|consen 172 KVG 174 (378)
T ss_pred ccC
Confidence 764
No 440
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=98.64 E-value=6.7e-08 Score=117.56 Aligned_cols=126 Identities=16% Similarity=0.199 Sum_probs=78.8
Q ss_pred ccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
.+.||+|++|.||+|+.. +|+.||||..+..... ...|
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----------------------------------------~~~~ 733 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-----------------------------------------PSSE 733 (968)
T ss_pred ccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-----------------------------------------cHHH
Confidence 357999999999999974 8999999976421100 0012
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~ 277 (666)
.+.+.+++| ..|.+++. ....++||||++|++|.++.. ..+.......+.++
T Consensus 734 ~~~l~~l~H--------------------pnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~i 789 (968)
T PLN00113 734 IADMGKLQH--------------------PNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGI 789 (968)
T ss_pred HHHHhhCCC--------------------CCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHH
Confidence 222222221 23444443 345689999999999987742 23333333333332
Q ss_pred H--HHHhh---hcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 278 Y--AHQIY---VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 278 ~--l~~i~---~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
. +..+| ..+++|||+||.||+++.+ +...+ +||..+
T Consensus 790 a~~L~yLH~~~~~~iiH~dlkp~Nil~~~~--~~~~~-~~~~~~ 830 (968)
T PLN00113 790 AKALRFLHCRCSPAVVVGNLSPEKIIIDGK--DEPHL-RLSLPG 830 (968)
T ss_pred HHHHHHhccCCCCCeecCCCCHHhEEECCC--CceEE-Eecccc
Confidence 2 56677 5699999999999999843 44443 355544
No 441
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.57 E-value=4.5e-08 Score=97.95 Aligned_cols=76 Identities=16% Similarity=0.186 Sum_probs=56.1
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCH--HHHHHHHHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNK--QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~--~~~~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
.++.+.|.||++|+.|---.. ++..+.. .++...-+-+.+..+|+.|++.||+|-.|+|++ ..|.|+|.|+||++
T Consensus 323 esrlffvieyv~ggdlmfhmq-rqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlld--aeghikltdygmck 399 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLD--AEGHIKLTDYGMCK 399 (593)
T ss_pred cceEEEEEEEecCcceeeehh-hhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEc--cCCceeecccchhh
Confidence 466789999999998864322 1122222 233333344558889999999999999999999 45999999999998
Q ss_pred c
Q 005995 317 K 317 (666)
Q Consensus 317 ~ 317 (666)
+
T Consensus 400 e 400 (593)
T KOG0695|consen 400 E 400 (593)
T ss_pred c
Confidence 6
No 442
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=98.53 E-value=3.7e-07 Score=93.62 Aligned_cols=166 Identities=11% Similarity=0.134 Sum_probs=95.3
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
.-+|+|.||+|-++..+ .+..|||||.+. + ..+++. -+.|.
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~-V-------------------------------~kYreA------a~iEi 136 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETKEHVALKIIKN-V-------------------------------DKYREA------ALIEI 136 (415)
T ss_pred hhhcCCcccceEEEeecCCCceehHHHHHH-H-------------------------------HHHhhH------HHHHH
Confidence 45999999999999865 679999997642 1 111111 11233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeee---ee-cCCCeeEeeecCCccCCChhhHHH-cCCCHH---HHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV---IQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQ---KVVEEI 274 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~---~~-~~~~vLvmE~i~G~~L~~~~~~~~-~~~~~~---~~~~~l 274 (666)
+.+.++.+. .|. ....+-.. +. .+.-++|.|.+ |.++.+...... ..+... .++.++
T Consensus 137 ~vLqki~~~------------DP~--g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL 201 (415)
T KOG0671|consen 137 EVLQKINES------------DPN--GKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQL 201 (415)
T ss_pred HHHHHHHhc------------CCC--CceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHH
Confidence 444454431 011 11222222 22 45567899977 666666633211 112223 333444
Q ss_pred HHHHHHHhhhcCccccCCCcCceEEeeCC------------------CCceEEEecccccccCHHHHHHHHHHHHHHHcC
Q 005995 275 TRAYAHQIYVDGFFNGDPHPGNFLVSKDP------------------PHRPILLDFGLTKKLSSSMKQALAKMFFAAAEG 336 (666)
Q Consensus 275 ~~~~l~~i~~~g~~H~D~hPgNilv~~~~------------------~~~i~liDFG~~~~l~~~~~~~~~~l~~a~~~~ 336 (666)
+++ +..+|..+++|-|+||.|||+.... .-.|++||||.+..-.+.. ..+ +..+
T Consensus 202 ~~s-v~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-s~i------VsTR 273 (415)
T KOG0671|consen 202 LES-VAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-STI------VSTR 273 (415)
T ss_pred HHH-HHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc-cee------eecc
Confidence 443 6678899999999999999985320 1247899999987654433 111 1234
Q ss_pred CHHHHHHHHHHcCCc
Q 005995 337 DHVALLSAFAEMGLR 351 (666)
Q Consensus 337 d~~~~~~~~~~~g~~ 351 (666)
.|. +-+.+.++|+.
T Consensus 274 HYR-APEViLgLGwS 287 (415)
T KOG0671|consen 274 HYR-APEVILGLGWS 287 (415)
T ss_pred ccC-CchheeccCcC
Confidence 443 45566777775
No 443
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.52 E-value=1.4e-06 Score=81.05 Aligned_cols=125 Identities=23% Similarity=0.363 Sum_probs=90.9
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
.-||.|..|.||.+... |.+||+|++|++.+.. ++..||+
T Consensus 28 ~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds~r~---------------------------------------~l~kEak 67 (201)
T COG2112 28 KELAKGTTSVVYLGEWR-GGEVALKVRRRDSPRR---------------------------------------NLEKEAK 67 (201)
T ss_pred hhhhcccccEEEEeecc-CceEEEEEecCCcchh---------------------------------------hHHHHHH
Confidence 46899999999999984 6799999999875421 1345777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHHHHhh
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l~~i~ 283 (666)
.++.+.. --..|++|.-++.++.|||++|.+|.++.. +.+++.+...+-.+|. +=
T Consensus 68 iLeil~g-------------------~~~~p~vy~yg~~~i~me~i~G~~L~~~~~----~~~rk~l~~vlE~a~~--LD 122 (201)
T COG2112 68 ILEILAG-------------------EGVTPEVYFYGEDFIRMEYIDGRPLGKLEI----GGDRKHLLRVLEKAYK--LD 122 (201)
T ss_pred HHHHhhh-------------------cCCCceEEEechhhhhhhhhcCcchhhhhh----cccHHHHHHHHHHHHH--HH
Confidence 7776654 235799998788888899999999987632 2255555554444431 22
Q ss_pred hcCccccCCCcC--ceEEeeCCCCceEEEeccccc
Q 005995 284 VDGFFNGDPHPG--NFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 284 ~~g~~H~D~hPg--Nilv~~~~~~~i~liDFG~~~ 316 (666)
..|+=|..++-+ ||++. ++++.||||-.++
T Consensus 123 ~~GI~H~El~~~~k~vlv~---~~~~~iIDFd~At 154 (201)
T COG2112 123 RLGIEHGELSRPWKNVLVN---DRDVYIIDFDSAT 154 (201)
T ss_pred HhccchhhhcCCceeEEec---CCcEEEEEccchh
Confidence 369999999854 77774 4689999998877
No 444
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=98.49 E-value=4.7e-06 Score=89.47 Aligned_cols=110 Identities=17% Similarity=0.263 Sum_probs=67.6
Q ss_pred CCCCHHHHHHHHHHHhCCChhccccccCccccccceeeeeEEEEecCC-CEEEEEeeCCChHHHHHHHHHHHHHHHHHHH
Q 005995 95 PPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDG-RQVVVKVQHQGIKTIILEDLKNAKSIVDWIA 173 (666)
Q Consensus 95 ~~~~~~~~~~~l~~~~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~~g-~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~ 173 (666)
-++..+.+...+.+..|.- .--...+-+++|.|-+..||+.+..+| +.|+||...|.+...-. .
T Consensus 5 ~~l~~~~v~~yl~~~~~~~--~~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~-------------~ 69 (401)
T PRK09550 5 ETLTEEDAVEYAALKLGLF--DPKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGE-------------S 69 (401)
T ss_pred eeCCHhHHHHHHHHhcCCC--CCcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccc-------------c
Confidence 3455666666664443321 111234457899999999999999877 59999987654321000 0
Q ss_pred hhCCCCChHHHHHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--cCCCeeEeeecCC
Q 005995 174 WAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDG 251 (666)
Q Consensus 174 ~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~~~~vLvmE~i~G 251 (666)
| | ..+ + -+..|++.+..+... .+..||+++. ....++||||+++
T Consensus 70 w--p-l~~-------------e-R~~~Eae~L~~l~~~-----------------~p~~VPkV~~~D~~~~~lVME~L~~ 115 (401)
T PRK09550 70 W--P-LTL-------------D-RARIEAEALKIQAKY-----------------VPDLVPKVYHYDEELAVTVMEDLSD 115 (401)
T ss_pred c--c-ccH-------------H-HHHHHHHHHHHHHhh-----------------CCCCCCeEEEECCCCCEEEEecCCC
Confidence 0 0 000 0 134567777766542 2457999997 4456999999998
Q ss_pred cc
Q 005995 252 IR 253 (666)
Q Consensus 252 ~~ 253 (666)
.+
T Consensus 116 ~~ 117 (401)
T PRK09550 116 HK 117 (401)
T ss_pred cc
Confidence 54
No 445
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.46 E-value=1.8e-06 Score=86.25 Aligned_cols=35 Identities=31% Similarity=0.406 Sum_probs=24.4
Q ss_pred cCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 285 ~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
.+++|+|+||+|||++++ ++++.||||+.++.-++
T Consensus 166 ~~~~HgD~~~~Nil~~~~-~~~i~iID~e~a~~~~~ 200 (239)
T PF01636_consen 166 PVLIHGDLHPGNILVDPS-DGRIGIIDFEDAGWGDP 200 (239)
T ss_dssp EEEE-SS-SGGGEEEESS-TTEEEE--GTT-EEEET
T ss_pred cEEEEeccccccceeeec-cceeEEEecccceECCH
Confidence 679999999999999932 46778999999877654
No 446
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=98.43 E-value=6.3e-08 Score=96.94 Aligned_cols=76 Identities=21% Similarity=0.390 Sum_probs=59.9
Q ss_pred CCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 240 ~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
.+.++|||++++ ++.+... ...|-+.+...+.+.+ .+++|..|++|||+||.||+|.. ++.++++|||.++.
T Consensus 94 ~e~y~v~e~m~~-nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~--~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 94 QEVYLVMELMDA-NLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNS--DCTLKILDFGLART 167 (369)
T ss_pred HhHHHHHHhhhh-HHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecc--hhheeeccchhhcc
Confidence 445799999976 4555443 3456677777777755 88899999999999999999984 58899999999987
Q ss_pred cCHH
Q 005995 318 LSSS 321 (666)
Q Consensus 318 l~~~ 321 (666)
-...
T Consensus 168 e~~~ 171 (369)
T KOG0665|consen 168 EDTD 171 (369)
T ss_pred cCcc
Confidence 6655
No 447
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=98.42 E-value=2.3e-07 Score=97.96 Aligned_cols=77 Identities=19% Similarity=0.191 Sum_probs=57.4
Q ss_pred CeeEeeecCCccCCChhhHHHcCCC--HHHHHHHHHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 242 TVLILEFMDGIRLNDCESLEAFGVN--KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 242 ~vLvmE~i~G~~L~~~~~~~~~~~~--~~~~~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.++.||-|=|+.|.....-+ ..++ ..++...++--.+..+|.+||+.||+||.|+|++ .+|-++|.|||.++.+.
T Consensus 495 vYmLmEaClGGElWTiLrdR-g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd--~~Gy~KLVDFGFAKki~ 571 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRDR-GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLD--NRGYLKLVDFGFAKKIG 571 (732)
T ss_pred hhhhHHhhcCchhhhhhhhc-CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeec--cCCceEEeehhhHHHhc
Confidence 46899999999998774322 1122 2333333333348899999999999999999999 45999999999999885
Q ss_pred HH
Q 005995 320 SS 321 (666)
Q Consensus 320 ~~ 321 (666)
..
T Consensus 572 ~g 573 (732)
T KOG0614|consen 572 SG 573 (732)
T ss_pred cC
Confidence 43
No 448
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.41 E-value=6e-06 Score=83.55 Aligned_cols=34 Identities=18% Similarity=0.117 Sum_probs=27.5
Q ss_pred cCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 285 ~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
..++|+|+||+|||++. ++...||||+.++.-++
T Consensus 163 ~~l~HgD~~~~Nil~~~--~~~~~iIDwe~a~~gdp 196 (244)
T cd05150 163 LVVTHGDACLPNIIVDP--GKFSGFIDLGRLGVADR 196 (244)
T ss_pred eEEECCCCCCccEEEeC--CcEEEEEEccccccccH
Confidence 45999999999999983 34567999999876554
No 449
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.39 E-value=2.1e-06 Score=86.38 Aligned_cols=33 Identities=36% Similarity=0.575 Sum_probs=26.8
Q ss_pred cCccccCCCcCceEEeeCCCCce-EEEecccccccCH
Q 005995 285 DGFFNGDPHPGNFLVSKDPPHRP-ILLDFGLTKKLSS 320 (666)
Q Consensus 285 ~g~~H~D~hPgNilv~~~~~~~i-~liDFG~~~~l~~ 320 (666)
.+++|+|+||+|||++ + +++ .+|||+.+..=++
T Consensus 164 ~~l~HGD~~~~Nvlv~--~-~~i~giIDw~~a~~gDp 197 (235)
T cd05155 164 PVWFHGDLAPGNLLVQ--D-GRLSAVIDFGCLGVGDP 197 (235)
T ss_pred ceEEeCCCCCCcEEEE--C-CCEEEEEeCcccCcCCh
Confidence 5699999999999997 2 455 6999999876554
No 450
>PRK05231 homoserine kinase; Provisional
Probab=98.39 E-value=5e-06 Score=87.76 Aligned_cols=49 Identities=10% Similarity=0.042 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHHHHHhCC-ChhccccccCccccccceeeeeEEEEecCCCEEEEEeeC
Q 005995 95 PPRPVQEVSQTIEREFGE-SMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQH 151 (666)
Q Consensus 95 ~~~~~~~~~~~l~~~~g~-~~~~~f~~~~~~pi~sgs~gqV~~a~l~~g~~VAVKv~~ 151 (666)
.+.+.+++..++ +.+|- .+. +-++++.|...++|+....+| .+++|+.+
T Consensus 5 t~ls~~~l~~~l-~~y~~~~~~------~~~~l~~G~~n~~y~v~t~~g-~~vLK~~~ 54 (319)
T PRK05231 5 TDVSDDELAAFL-APYDLGELL------SLKGIAEGIENSNFFLTTTQG-EYVLTLFE 54 (319)
T ss_pred ccCCHHHHHHHH-HhcCCchhh------ccchhccccccceEEEEeCCC-cEEEEEec
Confidence 466778888888 56764 222 236799999999999987555 68889864
No 451
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=98.38 E-value=2.3e-06 Score=88.16 Aligned_cols=90 Identities=26% Similarity=0.454 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHhCCC--hhccccccCccccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhC
Q 005995 99 VQEVSQTIEREFGES--MGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 176 (666)
Q Consensus 99 ~~~~~~~l~~~~g~~--~~~~f~~~~~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~ 176 (666)
|..|.+.|.+.+|.+ +.. .+|++.|++.++|+.. .+++.+-||+........
T Consensus 2 w~~i~~~~~~~~~~~~~i~~------~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~~~~~------------------- 55 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFKITS------IEPVSGGDINEAYRLD-TDGGSYFVKVNSESGRDM------------------- 55 (288)
T ss_dssp HHHHHHHHHHHHTS-----E------EEEE--SSSSEEEEEE-TTS-EEEEEEEEGGGCCH-------------------
T ss_pred hHHHHHHHHHHhCCCCceee------eEecCCCChhheEEEE-CCCccEEEEecChhhHHH-------------------
Confidence 567899999999976 333 3789999999999988 578999999986432221
Q ss_pred CCCChHHHHHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCc
Q 005995 177 PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGI 252 (666)
Q Consensus 177 ~~~~~~~~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~ 252 (666)
|..|++.++.+++. .++.||+|+. .+..+|+|||++..
T Consensus 56 ---------------------f~~Ea~gL~~L~~~-----------------~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 56 ---------------------FEGEAEGLKALAEA-----------------NPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp ---------------------HHHHHHHHHHHCHT-----------------TTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred ---------------------HHHHHHHHHHHHhc-----------------CCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 55688888887652 2578999985 35669999999877
No 452
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=98.35 E-value=2e-06 Score=89.20 Aligned_cols=139 Identities=20% Similarity=0.236 Sum_probs=88.6
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
..+|.|++|+||++... ..+++|+..+...... .....+.+|..
T Consensus 6 ~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~----------------------------------~~~~~~~~e~~ 49 (384)
T COG0515 6 RKLGEGSFGEVYLARDR--KLVALKVLAKKLESKS----------------------------------KEVERFLREIQ 49 (384)
T ss_pred EeecCCCCeEEEEEEec--cEEEEEeechhhccch----------------------------------hHHHHHHHHHH
Confidence 46889999999999976 8999998876543221 01111334444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---c-CCCeeEeeecCCccCCChhhHHH--cCCCHHHHHHHHHHH
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---S-SETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRA 277 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---~-~~~vLvmE~i~G~~L~~~~~~~~--~~~~~~~~~~~l~~~ 277 (666)
-+..+.+ .. .+...+. . ...+++|+++.|..+.+...... .............+.
T Consensus 50 ~~~~~~~------------------~~-~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (384)
T COG0515 50 ILASLNH------------------PP-NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQI 110 (384)
T ss_pred HHHHccC------------------Cc-ceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHH
Confidence 3333322 00 2222221 2 22489999999998885432211 134444444444444
Q ss_pred H--HHHhhhcCccccCCCcCceEEeeCCCC-ceEEEecccccccC
Q 005995 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPH-RPILLDFGLTKKLS 319 (666)
Q Consensus 278 ~--l~~i~~~g~~H~D~hPgNilv~~~~~~-~i~liDFG~~~~l~ 319 (666)
. +..+|..|++|+|+||.||+++. .+ .++++|||++..+.
T Consensus 111 ~~~l~~~H~~~~~hrd~kp~nil~~~--~~~~~~l~dfg~~~~~~ 153 (384)
T COG0515 111 LSALEYLHSKGIIHRDIKPENILLDR--DGRVVKLIDFGLAKLLP 153 (384)
T ss_pred HHHHHHHHhCCeeccCCCHHHeeecC--CCCeEEEeccCcceecC
Confidence 3 56899999999999999999984 35 69999999988443
No 453
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.35 E-value=3.4e-07 Score=98.55 Aligned_cols=138 Identities=20% Similarity=0.195 Sum_probs=88.8
Q ss_pred cccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
..+|-|-+|.||.|.++ -.-.||||-++.+.-+ ++| |..||
T Consensus 273 hKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe----------------------------veE----------FLkEA 314 (1157)
T KOG4278|consen 273 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----------------------------VEE----------FLKEA 314 (1157)
T ss_pred eccCCCcccceeeeeeeccceeeehhhhhhcchh----------------------------HHH----------HHHHH
Confidence 67999999999999986 3567999976543211 111 55577
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-cC---CCeeEeeecCCccCCChhhHHH-cCCCHHHHHHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS---ETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~~---~~vLvmE~i~G~~L~~~~~~~~-~~~~~~~~~~~l~~~ 277 (666)
..++.++|- + .-++.. |+ .-++++||+.-+.|-|+..... ..+..--++....++
T Consensus 315 AvMKeikHp------------------N--LVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQI 374 (1157)
T KOG4278|consen 315 AVMKEIKHP------------------N--LVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQI 374 (1157)
T ss_pred HHHHhhcCc------------------c--HHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHH
Confidence 776666541 0 011111 33 2479999999888877643211 111111222222222
Q ss_pred --HHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 278 --YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 278 --~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
.+..+-..+|||||+-..|.||.+ ++-+++.|||+++.+..+
T Consensus 375 sSaMeYLEkknFIHRDLAARNCLVgE--nhiVKvADFGLsRlMtgD 418 (1157)
T KOG4278|consen 375 SSAMEYLEKKNFIHRDLAARNCLVGE--NHIVKVADFGLSRLMTGD 418 (1157)
T ss_pred HHHHHHHHHhhhhhhhhhhhhccccc--cceEEeeccchhhhhcCC
Confidence 266666789999999999999984 467889999999987654
No 454
>PLN02756 S-methyl-5-thioribose kinase
Probab=98.33 E-value=1.4e-05 Score=85.40 Aligned_cols=59 Identities=14% Similarity=0.174 Sum_probs=40.5
Q ss_pred hcCCCCCHHHHHHHHHHH------hCCChhccccccCccccccceeeeeEEEEecCCCEEEEEeeCCChH
Q 005995 92 DSLPPRPVQEVSQTIERE------FGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIK 155 (666)
Q Consensus 92 d~~~~~~~~~~~~~l~~~------~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~ 155 (666)
...-+++.+.+...+.+. +|.. +....-++||-|....||+-+. ++..|+||...|.+.
T Consensus 4 ~~y~~l~~~~l~~yl~~~~~~~~~l~g~----~~~l~~~eiggGn~N~VyrV~~-~~~svVVKqa~p~~r 68 (418)
T PLN02756 4 SEFRPLDEKSLVEYIKATPALSSKIGND----LDDLKIKEVGDGNLNFVYIVVS-SSGSFVIKQALPYIR 68 (418)
T ss_pred cccccCCHHHHHHHHHHccchhhhcCCC----CCCceEEEcCCCceeeEEEEEc-CCccEEEEeCCcccc
Confidence 345566777776666554 3321 2334557899999999999876 466799998877654
No 455
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.30 E-value=7.3e-07 Score=96.82 Aligned_cols=150 Identities=19% Similarity=0.218 Sum_probs=94.4
Q ss_pred CCChhccccccCccccccceeeeeEEEEec-CCCEEE---EEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHH
Q 005995 111 GESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVV---VKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIID 186 (666)
Q Consensus 111 g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~-~g~~VA---VKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~ 186 (666)
+.+....|-.|++ -||.|++=.||||... +|.+|| ||+. .+.+
T Consensus 34 e~~p~gRy~k~~e-vLGrGafKtVYka~De~~giEVAWnqvk~~----------------d~~q---------------- 80 (632)
T KOG0584|consen 34 EKDPTGRYLKFDE-VLGRGAFKTVYKAFDEEEGIEVAWNQVKIR----------------DVTQ---------------- 80 (632)
T ss_pred ccCCCCceeehhh-hcccccceeeeeccccccchhhHHHHHhHH----------------Hhhc----------------
Confidence 4556677778874 7999999999999864 677775 3310 0000
Q ss_pred HHHHhchhhh-cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee---cC-C--CeeEeeecCCccCCChhh
Q 005995 187 EWCKEAPKEL-DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SS-E--TVLILEFMDGIRLNDCES 259 (666)
Q Consensus 187 e~~~~~~~El-d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~---~~-~--~vLvmE~i~G~~L~~~~~ 259 (666)
. .+++ .|..|+.-++.+.| ..|-+.|. +. + -++|+|.+.+++|..+..
T Consensus 81 ----~-~~~leR~~~Ev~lLKsL~H--------------------~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~k 135 (632)
T KOG0584|consen 81 ----S-PEELERLYSEVHLLKSLKH--------------------PNIIRFYDSWVDTDNKTINFITELFTSGTLREYRK 135 (632)
T ss_pred ----C-hHHHHHHHHHHHHHccCCC--------------------CceeeeeeheecCCCceeeeeeecccCCcHHHHHH
Confidence 0 0100 13445555444332 33445552 22 2 378999999999998753
Q ss_pred HHHcCCCHHHHHHHHHHHH--HHHhhhc--CccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 260 LEAFGVNKQKVVEEITRAY--AHQIYVD--GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 260 ~~~~~~~~~~~~~~l~~~~--l~~i~~~--g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+....+.+.+-...-+++ +..+|.+ -++|||+|-.||+|+- +.|.++|.|.|++..+..
T Consensus 136 -k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG-~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 136 -KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG-NLGEVKIGDLGLATLLRK 198 (632)
T ss_pred -HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC-CcCceeecchhHHHHhhc
Confidence 223345554443333333 4445543 5999999999999985 369999999999986643
No 456
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.30 E-value=2.1e-06 Score=98.37 Aligned_cols=138 Identities=17% Similarity=0.160 Sum_probs=92.5
Q ss_pred ccccceeeeeEEEEec----C----CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhh
Q 005995 125 PLATASIAQVHRATLV----D----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (666)
Q Consensus 125 pi~sgs~gqV~~a~l~----~----g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~El 196 (666)
++|+|.||+|++|.+. . ...||||..+......-..
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~------------------------------------ 346 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKK------------------------------------ 346 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHH------------------------------------
Confidence 9999999999999864 1 3579999887665432111
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeee-e---cCCCeeEeeecCCccCCChhhHHH----------
Q 005995 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI-Q---SSETVLILEFMDGIRLNDCESLEA---------- 262 (666)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~-~---~~~~vLvmE~i~G~~L~~~~~~~~---------- 262 (666)
++..|.+.+..+.+ |++ |-.+. . .+..++|+||++.+.|.++....+
T Consensus 347 ~~~~El~~m~~~g~-----------------H~n--iv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~ 407 (609)
T KOG0200|consen 347 DLMSELNVLKELGK-----------------HPN--IVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGV 407 (609)
T ss_pred HHHHHHHHHHHhcC-----------------Ccc--hhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCC
Confidence 12334444444332 111 11111 1 345789999999999888754333
Q ss_pred -----cCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 263 -----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 263 -----~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
..+...++.....++. ++.+....++|||+-.-|||+.. +..+++.|||+++...
T Consensus 408 ~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~--~~~~kIaDFGlar~~~ 469 (609)
T KOG0200|consen 408 FPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITK--NKVIKIADFGLARDHY 469 (609)
T ss_pred CccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecC--CCEEEEccccceeccC
Confidence 1155556666666655 66677789999999999999984 4678999999998643
No 457
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.29 E-value=8.4e-06 Score=81.92 Aligned_cols=77 Identities=17% Similarity=0.246 Sum_probs=53.7
Q ss_pred ccccccceeeeeEEEEecC--CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHH
Q 005995 123 ETPLATASIAQVHRATLVD--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~~--g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~ 200 (666)
-+|+..|-...||+....+ ++.|++|+..++... -+|..+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~--------------------------------------~~d~~~ 44 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL--------------------------------------IIDRER 44 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc--------------------------------------eecHHH
Confidence 3678889999999998764 689999987664221 012334
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCC
Q 005995 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLND 256 (666)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~ 256 (666)
|...+..+... ++ +|+++...+..++|||++|.++..
T Consensus 45 E~~~~~~l~~~------------------gl-~P~v~~~~~~~~l~e~i~G~~l~~ 81 (235)
T cd05157 45 ELRIHKLLSKH------------------GL-APKLYATFQNGLIYEFIPGRTLEP 81 (235)
T ss_pred HHHHHHHHHhC------------------CC-CCeEEEEeCCcEEEEeeCCCcCCH
Confidence 66666666541 33 688876555679999999988753
No 458
>PRK12396 5-methylribose kinase; Reviewed
Probab=98.25 E-value=7.2e-06 Score=87.09 Aligned_cols=51 Identities=22% Similarity=0.482 Sum_probs=40.8
Q ss_pred cCccccCCCcCceEEeeCCCCceEEEe--cccccccCHHHHHHHHHHHHHHHcCCH
Q 005995 285 DGFFNGDPHPGNFLVSKDPPHRPILLD--FGLTKKLSSSMKQALAKMFFAAAEGDH 338 (666)
Q Consensus 285 ~g~~H~D~hPgNilv~~~~~~~i~liD--FG~~~~l~~~~~~~~~~l~~a~~~~d~ 338 (666)
..++|+|+||||||+++ ..+++|| |+..+.+.=+.-.-+..++++...++.
T Consensus 227 ~aLlHGDlHtGSI~v~~---~~~kvIDpEFAfyGP~gFDiG~~lanll~ay~~~~~ 279 (409)
T PRK12396 227 QALIHGDLHTGSVFVKN---DSTKVIDPEFAFYGPMGYDIGNVMANLMFAWVNADA 279 (409)
T ss_pred hhhccCcCCCCCEEecC---CceEEEcccccccCCcHHHHHHHHHHHHHHHhcCcc
Confidence 56999999999999984 3689999 677777766666778888888876554
No 459
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.20 E-value=1.1e-05 Score=82.27 Aligned_cols=138 Identities=18% Similarity=0.146 Sum_probs=84.3
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHH
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~ 203 (666)
.++..|-..++|+.. .+|+.+++|+..++... -.+|..+|.+
T Consensus 2 ~~~~~G~tn~~y~~~-~~~~~~vlR~~~~~~~~-------------------------------------~~~~r~~E~~ 43 (256)
T TIGR02721 2 QTLSGGLTNRSWRIE-HPGISFVWRPQSPVCKA-------------------------------------LGVDRQREYQ 43 (256)
T ss_pred CcCCCcCcCCeEEEE-eCCccEEEeeCCccccc-------------------------------------ccCcHHHHHH
Confidence 367788888999987 46889999976543211 0123456777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCCh--------hh-------HHHcC----
Q 005995 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDC--------ES-------LEAFG---- 264 (666)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~--------~~-------~~~~~---- 264 (666)
.+..+... ++ .|+++......+||||++|.+++.. .. +....
T Consensus 44 ~l~~l~~~------------------g~-~P~~i~~~~~~~v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~ 104 (256)
T TIGR02721 44 ILQALSAL------------------GL-APKPILVNEHWLLVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGY 104 (256)
T ss_pred HHHHHHhc------------------CC-CCceEEEeCCEEEEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCCC
Confidence 77776541 23 6888875567899999999887642 00 11110
Q ss_pred -CCHH-HHHHH---H--------HHHHHHHhh--------hcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 265 -VNKQ-KVVEE---I--------TRAYAHQIY--------VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 265 -~~~~-~~~~~---l--------~~~~l~~i~--------~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
.+.. .+... + ....++.+. ...++|+|+||+||+++. ++ +.||||..++.=++.
T Consensus 105 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~--~~-~~lIDwE~a~~gdp~ 179 (256)
T TIGR02721 105 PLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTP--QG-LKLIDWEYASDGDIA 179 (256)
T ss_pred CCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeC--CC-CEEEeccccCcCCHH
Confidence 1111 11110 0 001111111 136899999999999983 34 899999998876553
No 460
>PRK09902 hypothetical protein; Provisional
Probab=98.07 E-value=4.4e-05 Score=74.21 Aligned_cols=146 Identities=14% Similarity=0.157 Sum_probs=92.4
Q ss_pred ccCccccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHH
Q 005995 120 DFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (666)
Q Consensus 120 ~~~~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~ 199 (666)
.+|+---+.|+.+.|++-.+ +|+.+=||-|.-.+... +..|. -+--|.
T Consensus 20 wve~pN~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s----------------~r~P~---------------g~ptf~ 67 (216)
T PRK09902 20 WVEEPNYRRNGMSGVQCVER-NGKKLYVKRMTHHLFHS----------------VRYPF---------------GRPTIV 67 (216)
T ss_pred eecCCCcCCCCcceEEEEEe-CCcEEEEEeccCccccc----------------ccCCC---------------CchHHH
Confidence 34444456799999999876 67788999764222211 01111 122366
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeec--------CCCeeEeeecCC-ccCCChhhHHHcCCC---H
Q 005995 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS--------SETVLILEFMDG-IRLNDCESLEAFGVN---K 267 (666)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~--------~~~vLvmE~i~G-~~L~~~~~~~~~~~~---~ 267 (666)
+|..++.++.+. ++.||++..+ -+.+||+|-++| .+|.++. .....+ .
T Consensus 68 rE~~~L~~L~~~------------------GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l--~~~~~~~~~~ 127 (216)
T PRK09902 68 REVAVIKELERA------------------GVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWY--AQHAVSPYSD 127 (216)
T ss_pred HHHHHHHHHHHc------------------CCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHH--hcCCcCCcch
Confidence 788899988872 5668877641 235899999987 3454442 222221 1
Q ss_pred ---HHHHHHHHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 268 ---QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 268 ---~~~~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
..+...+.+ .+.++|..|+.|+||-|-||+++.+++-.+.||||--++..
T Consensus 128 ~~k~~il~~va~-~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 128 EVRQAMLKAVAL-AFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred HHHHHHHHHHHH-HHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 233333333 47889999999999999999998432224999999765543
No 461
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=98.03 E-value=4.7e-05 Score=79.37 Aligned_cols=32 Identities=19% Similarity=0.206 Sum_probs=26.7
Q ss_pred cCccccCCCcCceEEeeCCCCceEEEeccccccc
Q 005995 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (666)
Q Consensus 285 ~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l 318 (666)
.+++|+|+||+||+++. ++.+.||||+.++.=
T Consensus 175 ~~l~HgD~~~~Nil~~~--~~~~~iIDfe~a~~g 206 (296)
T cd05153 175 RGVIHADLFRDNVLFDG--DELSGVIDFYFACTD 206 (296)
T ss_pred CcCCccCcCcccEEEeC--CceEEEeehhhhcCc
Confidence 58999999999999983 344579999988763
No 462
>PRK06148 hypothetical protein; Provisional
Probab=98.02 E-value=0.00016 Score=87.39 Aligned_cols=56 Identities=23% Similarity=0.338 Sum_probs=44.8
Q ss_pred HhhcCCCCCHHHHHHHHHHHhCCChhccccccCccccccceeeeeEEEEecCCCEEEEEeeCCC
Q 005995 90 LQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQG 153 (666)
Q Consensus 90 l~d~~~~~~~~~~~~~l~~~~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~ 153 (666)
+....|.++.+++.+.+++.+|-.- + -+||++ ..-++|+.+..+|+.+++||.+|+
T Consensus 4 ~~~~~p~~s~~~~~~~~~~~ygl~~-~------~~~L~s-~~d~nf~v~~~~g~~yVLKi~~~~ 59 (1013)
T PRK06148 4 LSHPAPEFTTKDAEALLAQHFGISA-T------ATPLDG-ERDLNFRLTTDDGADYILKIVNPS 59 (1013)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCce-E------EeecCC-cCCceEEEEeCCCCeEEEEEcCCc
Confidence 3445788999999999999999642 1 257855 568899998888999999999886
No 463
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=98.01 E-value=2.4e-05 Score=80.04 Aligned_cols=41 Identities=24% Similarity=0.372 Sum_probs=30.6
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
...+|..|++|+|++|.|++++ .+|.+.|.||+.+......
T Consensus 158 vA~Lh~~GlVHgdi~~~nfll~--~~G~v~Lg~F~~~~r~g~~ 198 (288)
T PF14531_consen 158 VANLHSYGLVHGDIKPENFLLD--QDGGVFLGDFSSLVRAGTR 198 (288)
T ss_dssp HHHHHHTTEEEST-SGGGEEE---TTS-EEE--GGGEEETTEE
T ss_pred HHHHhhcceEecccceeeEEEc--CCCCEEEcChHHHeecCce
Confidence 5567889999999999999999 5699999999988776543
No 464
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.96 E-value=0.00025 Score=73.02 Aligned_cols=36 Identities=28% Similarity=0.430 Sum_probs=29.0
Q ss_pred cCccccCCCcCceEEeeCCCCce-EEEecccccccCHHH
Q 005995 285 DGFFNGDPHPGNFLVSKDPPHRP-ILLDFGLTKKLSSSM 322 (666)
Q Consensus 285 ~g~~H~D~hPgNilv~~~~~~~i-~liDFG~~~~l~~~~ 322 (666)
..++|+|+||+|||+++ ++++ .+|||+++..=++..
T Consensus 185 ~~lvHGD~~~~Nilv~~--~~~~~gviDWe~a~iGDPa~ 221 (276)
T cd05152 185 TVLVHGDLHPGHILIDE--DARVTGLIDWTEAKVGDPAR 221 (276)
T ss_pred CeeEeCCCCCCcEEEeC--CCCEEEEECcHhcccCCHHH
Confidence 45899999999999983 3565 699999998776643
No 465
>PLN00181 protein SPA1-RELATED; Provisional
Probab=97.94 E-value=5.9e-06 Score=98.21 Aligned_cols=76 Identities=16% Similarity=0.166 Sum_probs=52.3
Q ss_pred CCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEee-----------------
Q 005995 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK----------------- 301 (666)
Q Consensus 241 ~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~----------------- 301 (666)
..+++|||.++ +|.++.......++...+...+.+++ +..+|..||+|||+||.|||++.
T Consensus 54 ~~~~~~e~~~~-~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~ 132 (793)
T PLN00181 54 SIVRALECEDV-SLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 132 (793)
T ss_pred hhhhhhccCCc-cHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccc
Confidence 35788998754 78776432223356556655555554 78899999999999999999963
Q ss_pred CCCCceEEEecccccc
Q 005995 302 DPPHRPILLDFGLTKK 317 (666)
Q Consensus 302 ~~~~~i~liDFG~~~~ 317 (666)
+.++.+++.|||+++.
T Consensus 133 ~~~~~~ki~DfG~a~~ 148 (793)
T PLN00181 133 DEDATTKSREIGSSRR 148 (793)
T ss_pred cccCcccccccccccc
Confidence 1234566777777654
No 466
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.93 E-value=5.3e-05 Score=79.28 Aligned_cols=36 Identities=22% Similarity=0.324 Sum_probs=29.0
Q ss_pred cCccccCCCcCceEEeeC--CCCceEEEecccccccCH
Q 005995 285 DGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 285 ~g~~H~D~hPgNilv~~~--~~~~i~liDFG~~~~l~~ 320 (666)
.++.|+|+||+|||++.+ .++.+.||||..++.-++
T Consensus 179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p 216 (302)
T cd05156 179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYR 216 (302)
T ss_pred ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCc
Confidence 478999999999999831 026899999999886554
No 467
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.91 E-value=0.00025 Score=74.47 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=27.3
Q ss_pred cCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 285 ~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
.|++|+|+||+||+++. ++...+|||+.+..=.
T Consensus 187 ~~l~HgD~~~~Nvl~~~--~~~~~vIDfd~~~~~~ 219 (307)
T TIGR00938 187 RGVIHADLFPDNVLFDG--DSVKGVIDFYFACTDA 219 (307)
T ss_pred CccCCCCCCcCcEEEEC--CceEEEeecccccCcc
Confidence 68999999999999983 3545899999987543
No 468
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.90 E-value=6.3e-05 Score=79.71 Aligned_cols=127 Identities=18% Similarity=0.183 Sum_probs=73.4
Q ss_pred ccccccceeeeeEEEEec-CCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHH
Q 005995 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~-~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~E 201 (666)
...+|=|-|+.|+.|... +.+.||+||++-.-. +.+.... |
T Consensus 83 ~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh--------------------------------YtEaAlD------E 124 (590)
T KOG1290|consen 83 QRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH--------------------------------YTEAALD------E 124 (590)
T ss_pred EEeccccccceeEEEeeccCCeEEEEEEEehhhH--------------------------------HHHHHHH------H
Confidence 467999999999999864 678999999974210 1111111 2
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----c---CC-CeeEeeecCCccCCChhh-HHHcCCCHHHHHH
Q 005995 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----S---SE-TVLILEFMDGIRLNDCES-LEAFGVNKQKVVE 272 (666)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~---~~-~vLvmE~i~G~~L~~~~~-~~~~~~~~~~~~~ 272 (666)
.+.+.+++.. .+.+...-.|-+++. + +. .++|.|++ |..|-.+.. ..-.|+....+-+
T Consensus 125 IklL~~v~~~------------Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~ 191 (590)
T KOG1290|consen 125 IKLLQQVREG------------DPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKE 191 (590)
T ss_pred HHHHHHHHhc------------CCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHH
Confidence 2333333331 000111122333332 2 22 37999998 555544432 2234555544444
Q ss_pred HHHHHH--HHHhhh-cCccccCCCcCceEEe
Q 005995 273 EITRAY--AHQIYV-DGFFNGDPHPGNFLVS 300 (666)
Q Consensus 273 ~l~~~~--l~~i~~-~g~~H~D~hPgNilv~ 300 (666)
++.+++ +..+|+ .|++|.||||.|||+.
T Consensus 192 I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 192 ICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 444443 677775 7999999999999997
No 469
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.88 E-value=3e-05 Score=78.57 Aligned_cols=195 Identities=14% Similarity=0.188 Sum_probs=117.9
Q ss_pred ccccccCccccccceeeeeEEEEe---cC--------CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHH
Q 005995 116 GMFMDFVETPLATASIAQVHRATL---VD--------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPI 184 (666)
Q Consensus 116 ~~f~~~~~~pi~sgs~gqV~~a~l---~~--------g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~ 184 (666)
.+|+.++. .|+.|.-+.|..|.- .+ -+.+||||.+.-+.+.-.+|--+ +.=.++-..+ ...+...+
T Consensus 251 gvle~i~G-iIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~Yi-KDDfRFKDRF-SK~NpR~i 327 (531)
T KOG2269|consen 251 GVLESIDG-IISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEYI-KDDFRFKDRF-SKQNPRGI 327 (531)
T ss_pred hhHHhhhh-hhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhhh-ccchhhhhhh-cccCcHHH
Confidence 35556653 688888888988842 11 24678888654433322222110 0000010111 12344556
Q ss_pred HHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCccCCChhhHHHcC
Q 005995 185 IDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFG 264 (666)
Q Consensus 185 ~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~ 264 (666)
+.-|.+ .|.-|+.++.. .++.+|.|..-.++||||.|+.-.-+.. ..+....
T Consensus 328 ~~mWAE---------kEmhNL~RMq~------------------~GlpcP~vV~lkkhvLVMsFiGd~~~aA-PkLK~v~ 379 (531)
T KOG2269|consen 328 LKMWAE---------KEMHNLSRMQK------------------HGLPCPQVVKLKKHVLVMSFIGDQGLAA-PKLKNVE 379 (531)
T ss_pred HHHHHH---------HHHHHHHHHHh------------------cCCCCCceeeeecceEEEEeecCCCCCC-ccccccc
Confidence 665554 47789998876 3678888887788999999995322221 1111111
Q ss_pred CC---HHHHHHHHHHHHHHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHH
Q 005995 265 VN---KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVAL 341 (666)
Q Consensus 265 ~~---~~~~~~~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~~~~~~~l~~a~~~~d~~~~ 341 (666)
+. .......+..+..+..++.-+||+|+.--|+|.. .|++-+||-..+...+...--. ++.+|...+
T Consensus 380 l~d~E~~~aY~q~~~~M~~lY~Ec~LVHADlSEyN~Lw~---~gKvw~IDVsQsvep~HP~~Le-------FL~RDc~Ni 449 (531)
T KOG2269|consen 380 LTDDERRNAYDQVQSIMCRLYKECLLVHADLSEYNLLWT---PGKVWVIDVSQSVEPSHPRSLE-------FLTRDCQNI 449 (531)
T ss_pred cChHHHHHHHHHHHHHHHHHHHhhheeecchhhhhheec---CCceEEEechhccCCCCcchhH-------HHHHHHHHH
Confidence 21 2223333333444445568899999999999998 3699999999887765543322 356788889
Q ss_pred HHHHHHcCCc
Q 005995 342 LSAFAEMGLR 351 (666)
Q Consensus 342 ~~~~~~~g~~ 351 (666)
...|.+.|..
T Consensus 450 ~~FF~r~G~p 459 (531)
T KOG2269|consen 450 ITFFTRIGTP 459 (531)
T ss_pred HHHHHhcCCC
Confidence 9999999875
No 470
>PLN02876 acyl-CoA dehydrogenase
Probab=97.85 E-value=0.00015 Score=86.24 Aligned_cols=107 Identities=13% Similarity=0.160 Sum_probs=68.3
Q ss_pred CCCHHHHHHHHHHHhCCChhccccccCccccccceeeeeEEEEecCC---CEEEEEeeCCChHHHHHHHHHHHHHHHHHH
Q 005995 96 PRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWI 172 (666)
Q Consensus 96 ~~~~~~~~~~l~~~~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~~g---~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~ 172 (666)
+++.+.+...+.+.++. +..-...++-++++.|....+|+-+..+| ..+++|...|+....
T Consensus 17 ~~d~~~l~~~l~~~~~~-~~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~--------------- 80 (822)
T PLN02876 17 RFDEDALLRYAAANVAG-FPVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ--------------- 80 (822)
T ss_pred cCCHHHHHHHHHHhCCC-cCCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc---------------
Confidence 36777788888776532 11111123457899999999999887554 467888765542100
Q ss_pred HhhCCCCChHHHHHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee-c------CCCeeE
Q 005995 173 AWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S------SETVLI 245 (666)
Q Consensus 173 ~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~-~------~~~vLv 245 (666)
..-++.+|++.+..+.. +.++.||+++. | +..++|
T Consensus 81 ---------------------~~~~~~rE~~~l~~L~~-----------------~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 81 ---------------------SAHAVEREYQVLRALGE-----------------HTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred ---------------------cHHHHHHHHHHHHHHhh-----------------cCCCCCCcEEEEecCCCcCCCceEE
Confidence 01124567777777653 13578999886 3 246899
Q ss_pred eeecCCccCCC
Q 005995 246 LEFMDGIRLND 256 (666)
Q Consensus 246 mE~i~G~~L~~ 256 (666)
|||++|..+.+
T Consensus 123 ME~v~G~~~~~ 133 (822)
T PLN02876 123 MEYLEGRIFVD 133 (822)
T ss_pred EEecCCcccCC
Confidence 99999987643
No 471
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=97.84 E-value=0.0001 Score=77.33 Aligned_cols=29 Identities=24% Similarity=0.324 Sum_probs=24.8
Q ss_pred ccccccceeeeeEEEEecCCCEEEEEeeCCC
Q 005995 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQG 153 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~ 153 (666)
..++++ +--.||+....+|+. ++||.+|+
T Consensus 31 ~~~l~s-~eN~~f~~~~~~g~~-iLki~~~~ 59 (331)
T COG2334 31 LRGLNS-EENSNFRVQTEDGRY-ILKIYRPG 59 (331)
T ss_pred cccccc-ccCceEEEEecCCCe-EEEEecCC
Confidence 357888 888999999878877 99999998
No 472
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.78 E-value=0.00014 Score=76.54 Aligned_cols=50 Identities=26% Similarity=0.499 Sum_probs=36.2
Q ss_pred cCccccCCCcCceEEeeCCCCceEEEecccc--cccCHHHHHHHHHHHHHHHcCC
Q 005995 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLT--KKLSSSMKQALAKMFFAAAEGD 337 (666)
Q Consensus 285 ~g~~H~D~hPgNilv~~~~~~~i~liDFG~~--~~l~~~~~~~~~~l~~a~~~~d 337 (666)
..++|+|+|||||++++ ..+++|||-++ +...-+.-.-++.++.+...++
T Consensus 192 ~~llHGDl~~gNi~~~~---~~~~~iD~e~~~~G~~~~Dlg~~ianL~l~~~~~~ 243 (370)
T TIGR01767 192 ETLLHGDLHSGSIFVSE---HETKVIDPEFAFYGPIGFDIGQFIANLFLNALSRD 243 (370)
T ss_pred ceeeeccCCcccEEEcC---CCCEEEcCcccccCchHhhHHHHHHHHHHHHhCcc
Confidence 57899999999999973 45889998654 4444444555677777766554
No 473
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.73 E-value=0.00087 Score=65.20 Aligned_cols=156 Identities=16% Similarity=0.220 Sum_probs=91.5
Q ss_pred ccccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHH
Q 005995 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (666)
Q Consensus 123 ~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea 202 (666)
..|||+|+-=-||.= ++.....|||.+|+....... ..++.....|..... ++++|.
T Consensus 6 ~~~i~~G~~R~cy~H--P~dp~~cIKV~~~~~~~~~~~-------~~~~~k~~~~~~~~~--------------~~~~E~ 62 (199)
T PF10707_consen 6 SDLIAQGGERDCYQH--PDDPNLCIKVMRPDRGERRRP-------FKRWLKRLRPKSRYR--------------QNRREL 62 (199)
T ss_pred CcccccCCCceEEEC--CCCCCeEEEEEcccccccccc-------chhHHHhhcccchhH--------------HHHHHH
Confidence 468999997777643 466788999999876111110 111111111111111 133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee--cC--CCeeEeeecC---Cc---cCCChhhHHHcCCCHHHHHH
Q 005995 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SS--ETVLILEFMD---GI---RLNDCESLEAFGVNKQKVVE 272 (666)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~--~~--~~vLvmE~i~---G~---~L~~~~~~~~~~~~~~~~~~ 272 (666)
+.-..+.. . ++....++|++|. .| ..-+|+|.+. |. +|.++ +...+++. ...
T Consensus 63 ~~y~~l~~--~------------~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~--l~~~~~~~--~~~ 124 (199)
T PF10707_consen 63 RYYKQLSL--R------------RGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDY--LKEGGLTE--ELR 124 (199)
T ss_pred HHHHHHhh--c------------cCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHH--HHcCCccH--HHH
Confidence 44443331 0 1234578999986 23 3468888873 32 22222 23334444 444
Q ss_pred HHHHHHHHHhhhcCccccCCCcCceEEeeCCCC--ceEEEe-cccccccC
Q 005995 273 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLD-FGLTKKLS 319 (666)
Q Consensus 273 ~l~~~~l~~i~~~g~~H~D~hPgNilv~~~~~~--~i~liD-FG~~~~l~ 319 (666)
.+++-+.+.++.++++.+|++|+||++...+++ +++||| ||....++
T Consensus 125 ~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~~ip 174 (199)
T PF10707_consen 125 QALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEKELIP 174 (199)
T ss_pred HHHHHHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCCCccccc
Confidence 455667888899999999999999999865444 589999 67765544
No 474
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.69 E-value=0.00066 Score=66.07 Aligned_cols=95 Identities=20% Similarity=0.328 Sum_probs=67.1
Q ss_pred CHHHHHHHHHHHhCCChhccccccCccccccceeeeeEEEEecCCCEEEEEeeCCChHHHHHHHHHHHHHHHHHHHhhCC
Q 005995 98 PVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEP 177 (666)
Q Consensus 98 ~~~~~~~~l~~~~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~~~~~ 177 (666)
.|..|.+.+.+.+|.. ++ -+.+++.-|.+-+.|+-.. +..++-||+.......
T Consensus 1 mw~~i~~qlse~~g~~--~i---~er~~v~gG~inea~~v~d-g~~~~FvK~n~~~~~~--------------------- 53 (286)
T COG3001 1 MWQAISQQLSEQLGEG--EI---KEREEVSGGDINEAWRLRD-GTDPFFVKCNQREQLS--------------------- 53 (286)
T ss_pred ChHHHHHHHHHHhCch--hh---hcccccCCccccceeEeec-CCcceEEEecchhhHH---------------------
Confidence 3677888899999976 32 2346777777777776653 4578999975422111
Q ss_pred CCChHHHHHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeee----cCCCeeEeeecCCcc
Q 005995 178 QYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIR 253 (666)
Q Consensus 178 ~~~~~~~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~----~~~~vLvmE~i~G~~ 253 (666)
-|..|+..++.+.+. ..+.||+|+. .+..+|||||++-.+
T Consensus 54 -------------------~f~AEa~gL~~la~s-----------------~ti~VP~vi~~G~~~~~sylVle~L~~~~ 97 (286)
T COG3001 54 -------------------MFTAEADGLELLARS-----------------NTITVPKVIAVGASRDHSYLVLEYLPTGP 97 (286)
T ss_pred -------------------HHHHHHHHHHHHHhc-----------------CCccccceEEecCCCCeeEEEEeeccCCC
Confidence 166788888888763 2489999996 244699999999877
Q ss_pred CC
Q 005995 254 LN 255 (666)
Q Consensus 254 L~ 255 (666)
++
T Consensus 98 ~d 99 (286)
T COG3001 98 LD 99 (286)
T ss_pred CC
Confidence 76
No 475
>PRK06149 hypothetical protein; Provisional
Probab=97.62 E-value=0.00046 Score=83.43 Aligned_cols=59 Identities=19% Similarity=0.272 Sum_probs=43.2
Q ss_pred HHHHhhcCCCCCHHHHHHHHHHHhCCChhccccccCccccccceeeeeEEEEecCCCEEEEEeeCCCh
Q 005995 87 LKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGI 154 (666)
Q Consensus 87 l~~l~d~~~~~~~~~~~~~l~~~~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~ 154 (666)
+..+....|.++.+++..++++.+|-. .+ -.+++++.- ++|+.+..+| ..++||.+|..
T Consensus 7 ~~~~~~~~p~ls~~~~~~ll~~~ygl~-~~------~~~L~s~~d-~nf~v~t~~~-~yVLKi~~~~~ 65 (972)
T PRK06149 7 IDRSSLPAPDVSEAQAERILAEHYGLS-GT------LTELGSQQD-RNFRVDSDGG-RFVLKICHAAY 65 (972)
T ss_pred hccCCCCCCCCCHHHHHHHHHHhcCCc-eE------EEecCCcCc-ceEEEEecCC-cEEEEeCCccC
Confidence 445666788999999999999999854 12 246765554 7898876554 67789998754
No 476
>PLN02236 choline kinase
Probab=97.60 E-value=0.00058 Score=72.74 Aligned_cols=161 Identities=16% Similarity=0.264 Sum_probs=93.7
Q ss_pred HHHHHHHHHhCCChhccc--cccCccccccceeeeeEEEEecC-----CCEEEEEeeCCChHHHHHHHHHHHHHHHHHHH
Q 005995 101 EVSQTIEREFGESMGGMF--MDFVETPLATASIAQVHRATLVD-----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA 173 (666)
Q Consensus 101 ~~~~~l~~~~g~~~~~~f--~~~~~~pi~sgs~gqV~~a~l~~-----g~~VAVKv~~p~~~~~~~~dl~~l~~l~~~~~ 173 (666)
.+.+++.+ ++..|.++. +.++-+|+..|---++|+....+ ++.|++|+..++....
T Consensus 18 ~~~~~~~~-~~~~w~~~~~~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~---------------- 80 (344)
T PLN02236 18 ELKRILHS-LASKWGDVVDDEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELF---------------- 80 (344)
T ss_pred HHHHHHHH-hcchhcCCCCcCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCee----------------
Confidence 34455544 455565432 34566788888888999987542 3689999877654211
Q ss_pred hhCCCCChHHHHHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeeecCCcc
Q 005995 174 WAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIR 253 (666)
Q Consensus 174 ~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~i~G~~ 253 (666)
+|-.+|.+++..+... ++ -|+++.......++||++|.+
T Consensus 81 ----------------------idR~~E~~~~~~l~~~------------------gl-~P~~~~~~~~g~v~efi~g~~ 119 (344)
T PLN02236 81 ----------------------FDRDDEIRTFECMSRH------------------GQ-GPRLLGRFPNGRVEEFIHART 119 (344)
T ss_pred ----------------------echHHHHHHHHHHHHc------------------CC-CCceEEEECCceEEEeeCCCC
Confidence 1234466676666552 22 566666444457899999988
Q ss_pred CCChh--------h-------HHHcC------CCH-HHHHHHH-------------------HHHH---HHH-----hhh
Q 005995 254 LNDCE--------S-------LEAFG------VNK-QKVVEEI-------------------TRAY---AHQ-----IYV 284 (666)
Q Consensus 254 L~~~~--------~-------~~~~~------~~~-~~~~~~l-------------------~~~~---l~~-----i~~ 284 (666)
+.... . +.... .+. .++...+ +... +.. ...
T Consensus 120 l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~ 199 (344)
T PLN02236 120 LSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQE 199 (344)
T ss_pred CCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCC
Confidence 76320 0 00101 000 1110000 0000 111 112
Q ss_pred cCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 285 ~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
..+.|+|++|+|||++++ ++.+.+|||..++.-++
T Consensus 200 ~~~cH~Dl~~~Nil~~~~-~~~~~lID~Eya~~~~~ 234 (344)
T PLN02236 200 IGFCHNDLQYGNIMIDEE-TRAITIIDYEYASYNPV 234 (344)
T ss_pred ceEEeCCCCcCcEEEeCC-CCcEEEEeehhccccch
Confidence 378999999999999842 46799999999886554
No 477
>PRK11768 serine/threonine protein kinase; Provisional
Probab=97.54 E-value=0.0015 Score=68.99 Aligned_cols=54 Identities=20% Similarity=0.170 Sum_probs=35.3
Q ss_pred CCCCCHHHHHHHHHHHhCCChhccccccCccccccceeeeeEEEEecCCCEEEEEeeCCCh
Q 005995 94 LPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGI 154 (666)
Q Consensus 94 ~~~~~~~~~~~~l~~~~g~~~~~~f~~~~~~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~ 154 (666)
.+....+.+...+++. |-..... ..++ .+.-.+||+....+|+.+++|+.+|+-
T Consensus 8 ~~~l~p~~~~~a~~~~-g~~~~~~-----~~~l-~s~eN~vy~v~~~~~~~~vlKv~r~~~ 61 (325)
T PRK11768 8 FQTLTPDLILDALESL-GLRVDGR-----LLAL-NSYENRVYQFGDEDGRRVVAKFYRPER 61 (325)
T ss_pred CCCCChHHHHHHHHHc-CCCCccc-----eEee-ccccceEEEEecCCCCEEEEEEcCccc
Confidence 4456667777777654 5432221 1222 445678999988789999999998863
No 478
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=97.20 E-value=0.00045 Score=71.66 Aligned_cols=72 Identities=14% Similarity=0.138 Sum_probs=46.8
Q ss_pred CeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCC--ceEEEeccccc
Q 005995 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTK 316 (666)
Q Consensus 242 ~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~--~i~liDFG~~~ 316 (666)
.+|||-..+- +|..+. .....+...-.-.+++.+ ..+++++|+-|||+|..|||+.-++|+ .+++.||||+-
T Consensus 318 lylvMkrY~~-tLr~yl--~~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL 393 (598)
T KOG4158|consen 318 LYLVMKRYRQ-TLREYL--WTRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL 393 (598)
T ss_pred EEEehhcchh-hHHHHH--hcCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence 4788876643 444432 222223322222333333 678899999999999999999765554 57899999974
No 479
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.12 E-value=0.0064 Score=63.32 Aligned_cols=36 Identities=22% Similarity=0.334 Sum_probs=30.0
Q ss_pred cCccccCCCcCceEEeeCCCCceEEEecccccccCHHH
Q 005995 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (666)
Q Consensus 285 ~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~~ 322 (666)
..++|+|.|+||+++++ ++.+.++||+++..=++..
T Consensus 198 ~~lvHGD~~~gNlii~~--~~~~gVlDwe~~~lGDP~~ 233 (321)
T COG3173 198 PVLVHGDYRPGNLIIDP--GRPTGVLDWELATLGDPLE 233 (321)
T ss_pred ceeeeCCcccCCEEEeC--CCeeEEEeccccccCCcHH
Confidence 47999999999999994 4568999999998766543
No 480
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=97.07 E-value=0.00013 Score=84.29 Aligned_cols=36 Identities=28% Similarity=0.254 Sum_probs=30.9
Q ss_pred HHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 279 l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
+.|.|+.|+.|+|||.+||||+. -+=+.|.||..-+
T Consensus 133 l~qcH~~gVcHGDIKsENILiTS--WNW~~LtDFAsFK 168 (1431)
T KOG1240|consen 133 LSQCHKLGVCHGDIKSENILITS--WNWLYLTDFASFK 168 (1431)
T ss_pred HHHHHHcCccccccccceEEEee--echhhhhcccccC
Confidence 88999999999999999999983 3557888887655
No 481
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=96.86 E-value=0.0033 Score=63.58 Aligned_cols=31 Identities=26% Similarity=0.244 Sum_probs=27.8
Q ss_pred cccccceeeeeEEEEecCCCEEEEEeeCCCh
Q 005995 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGI 154 (666)
Q Consensus 124 ~pi~sgs~gqV~~a~l~~g~~VAVKv~~p~~ 154 (666)
.++..|+.+.|+.++..||+++++|+..|.-
T Consensus 8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~ 38 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPHA 38 (253)
T ss_pred CCCCCCcceEEEEEEcCCCCeEEEEecCCcc
Confidence 4678899999999999999999999998754
No 482
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.79 E-value=0.0069 Score=64.21 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=27.9
Q ss_pred ccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 287 FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 287 ~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
+.|.|++|+|||++++ ++++.+|||..++.-++
T Consensus 184 ~CHnDl~~~NiL~~~~-~~~l~lID~EYag~nd~ 216 (330)
T PLN02421 184 FAHNDLLSGNLMLNED-EGKLYFIDFEYGSYSYR 216 (330)
T ss_pred EEECCCCcccEEEeCC-CCcEEEEcccccCCCcc
Confidence 7999999999999743 46899999999886554
No 483
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=96.67 E-value=0.0018 Score=73.73 Aligned_cols=70 Identities=14% Similarity=0.097 Sum_probs=48.6
Q ss_pred eeecCCccCCChhhHHHcCCCHHHHHHHHHHHH--HHHhhhcCccccCCCcCceEEeeCCCCceEEEecccccccC
Q 005995 246 LEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (666)
Q Consensus 246 mE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~--l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~ 319 (666)
||||++ +|..+.... ..+...++..-+-++. ++.+|..|+-|||+||.|+++.. +|.++++|||.+..+.
T Consensus 400 mE~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~--~g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTE--NGILKIIDFGAASVFR 471 (601)
T ss_pred hhcccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEec--CCceEEeecCcceeec
Confidence 999999 776653211 1223332222222222 57788999999999999999994 5899999999987653
No 484
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.63 E-value=0.0078 Score=59.36 Aligned_cols=35 Identities=26% Similarity=0.364 Sum_probs=22.8
Q ss_pred cCccccCCCcCceEEeeCCCCceEEEecccccccCH
Q 005995 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (666)
Q Consensus 285 ~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~ 320 (666)
..+.|.|++|+|||++. .++++.||||-.++.-+.
T Consensus 143 ~v~cHnDl~~~Nil~~~-~~~~~~lIDfEya~~n~~ 177 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINN-KDGEVKLIDFEYAGYNDR 177 (211)
T ss_dssp EEEE-S--SGGGEEETS-SSSCEEE--GTT-EEEEH
T ss_pred ceEeeccCccccEEecc-CCCeEEEecHHHHhhccc
Confidence 46899999999999922 358999999998876543
No 485
>PTZ00384 choline kinase; Provisional
Probab=96.13 E-value=0.063 Score=57.92 Aligned_cols=102 Identities=18% Similarity=0.165 Sum_probs=63.2
Q ss_pred CCHHHHHHHHHHHhCCChhcc-ccccCccccccceeeeeEEEEecCC--CE-----EEEEeeCCChHHHHHHHHHHHHHH
Q 005995 97 RPVQEVSQTIEREFGESMGGM-FMDFVETPLATASIAQVHRATLVDG--RQ-----VVVKVQHQGIKTIILEDLKNAKSI 168 (666)
Q Consensus 97 ~~~~~~~~~l~~~~g~~~~~~-f~~~~~~pi~sgs~gqV~~a~l~~g--~~-----VAVKv~~p~~~~~~~~dl~~l~~l 168 (666)
.....+++++.+-.+ .|.++ -..++-+|+..|--.++|++...++ .. |++++.-.+...
T Consensus 29 ~~~~~~~~~~~~~~p-~w~~~~~~~i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l------------ 95 (383)
T PTZ00384 29 HSHSNLKSLCIRHVP-FWNNVNPEFIEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSL------------ 95 (383)
T ss_pred ccHHHHHHHHHHHCC-ccccCCcccEEEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCce------------
Confidence 456677777776665 45443 1345567888899999999986543 22 555542111110
Q ss_pred HHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcceeeeeeeecCCCeeEeee
Q 005995 169 VDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEF 248 (666)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~vLvmE~ 248 (666)
-+|-.+|.+.+..+.+. -.-|+++......++.||
T Consensus 96 --------------------------~IdR~~E~~i~~~Ls~~-------------------glgP~l~~~f~~g~l~ef 130 (383)
T PTZ00384 96 --------------------------VIDNDLQYNIAKLLGDN-------------------NFGPKIIGRFGDFTIQEW 130 (383)
T ss_pred --------------------------EeccHHHHHHHHHHHhC-------------------CCCCeEEEecCCEEEEEE
Confidence 01223466666666541 245788877777899999
Q ss_pred cCCccCCC
Q 005995 249 MDGIRLND 256 (666)
Q Consensus 249 i~G~~L~~ 256 (666)
++|.+++.
T Consensus 131 IeGr~l~~ 138 (383)
T PTZ00384 131 VEGNTMGI 138 (383)
T ss_pred eccccCCh
Confidence 99998864
No 486
>PRK10271 thiK thiamine kinase; Provisional
Probab=95.84 E-value=0.0081 Score=57.59 Aligned_cols=34 Identities=21% Similarity=0.199 Sum_probs=28.2
Q ss_pred cCccccCCCcCceEEeeCCCCceEEEecccccccCHH
Q 005995 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (666)
Q Consensus 285 ~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~l~~~ 321 (666)
.-..|+|+||+||+++ + +.+++|||+.++.-++.
T Consensus 77 ~~p~H~D~~~~N~~~~--~-~~~~lIDwe~a~~gDp~ 110 (188)
T PRK10271 77 LAPLHMDVHAGNLVHS--A-SGLRLIDWEYAGDGDIA 110 (188)
T ss_pred eeeecCCCCCccEEEE--C-CCEEEEeCCcccCCCHH
Confidence 4579999999999997 3 34999999999887664
No 487
>COG1686 DacC D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]
Probab=95.74 E-value=0.0097 Score=63.88 Aligned_cols=66 Identities=23% Similarity=0.312 Sum_probs=49.6
Q ss_pred ECCeEEEEeeeeccCCCCCCCCCCCCceeecCCcHHHHHHHHHHHHHcCCCCCCCccccccccCcc--------CCCCcc
Q 005995 504 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKS--------NGKDLI 575 (666)
Q Consensus 504 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SvsK~~ta~~i~~lve~G~l~ldd~v~~ylp~~~~--------~~~~~i 575 (666)
..|+++| .-++|+.+++||+||.+|+.+++..++.|+|+|+++|.-=-..+.. ...+.+
T Consensus 47 ~sGkVLy-------------~kn~d~~~~pASlTKlMTayv~~ea~~~gki~~~~~v~is~~a~~~~~~S~~~l~~G~~~ 113 (389)
T COG1686 47 DSGKVLY-------------SKNADARRPPASLTKLMTAYVVLEALKAGKIKLDDKVTISENAWAKGGGSKMFLKPGETV 113 (389)
T ss_pred CCCcEee-------------ccCCCCCCCccHHHHHHHHHHHHHHhhccCCCccceecccHhhhhcCCCccceeccCCEE
Confidence 5688887 2367889999999999999999999999999999987421111111 113678
Q ss_pred cHHHHhc
Q 005995 576 KVHHVLN 582 (666)
Q Consensus 576 Ti~~LLt 582 (666)
|+++|+.
T Consensus 114 tv~dLl~ 120 (389)
T COG1686 114 TVRDLLK 120 (389)
T ss_pred EHHHHHH
Confidence 8888875
No 488
>PRK15442 beta-lactamase TEM; Provisional
Probab=95.58 E-value=0.023 Score=58.55 Aligned_cols=64 Identities=20% Similarity=0.284 Sum_probs=47.5
Q ss_pred CCCCCceeecCCcHHHHHHHHHHHHHcCCCCCCCccc----cccccC---ccCCCCcccHHHHhcCcCCCC
Q 005995 525 VQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA----NIWPEF---KSNGKDLIKVHHVLNHTSGLH 588 (666)
Q Consensus 525 ~~~~t~f~i~SvsK~~ta~~i~~lve~G~l~ldd~v~----~ylp~~---~~~~~~~iTi~~LLthtSGl~ 588 (666)
.+.|..|+++|+.|.+++.+++..+++|+++||++|. +..+.- ...-...+|+++|+..+--..
T Consensus 56 ~n~d~~fp~aSt~K~~i~~avl~~v~~g~l~L~~~v~i~~~d~~~~sp~~~~~~~~~~Tl~eL~~~mi~~S 126 (284)
T PRK15442 56 FRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 126 (284)
T ss_pred ecCCCcccchHHHHHHHHHHHHHHHHCCCCCCCceEEecHHHhcCCCchhhhccCCCccHHHHHHHHHHcC
Confidence 3668889999999999999999999999999999975 222211 111123589999988765443
No 489
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=95.57 E-value=0.19 Score=54.71 Aligned_cols=45 Identities=22% Similarity=0.403 Sum_probs=32.0
Q ss_pred ccccCCCcCceEEeeCCCCce---EEEecccccccCHHHHHHHHHHHHHH
Q 005995 287 FFNGDPHPGNFLVSKDPPHRP---ILLDFGLTKKLSSSMKQALAKMFFAA 333 (666)
Q Consensus 287 ~~H~D~hPgNilv~~~~~~~i---~liDFG~~~~l~~~~~~~~~~l~~a~ 333 (666)
++|+|+...|||.+.+++|+. .||||=++..-++ -..+++++..+
T Consensus 270 L~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~--~eDl~Rll~~~ 317 (414)
T PF07914_consen 270 LVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSP--AEDLARLLVSC 317 (414)
T ss_pred eecCCccHHheeeecCCchhHHHHHHHHHHHhhcCch--HHHHHHHHHhc
Confidence 899999999999997655532 5899987766554 23455555544
No 490
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=95.45 E-value=0.032 Score=61.72 Aligned_cols=83 Identities=23% Similarity=0.177 Sum_probs=57.6
Q ss_pred cCCCeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHH--HHHHhhhcCccccCCCcCceEEeeCCCCceEEEeccccc
Q 005995 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA--YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (666)
Q Consensus 239 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~--~l~~i~~~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~ 316 (666)
.++..++++|+.|+.+-...... ...+.......+++. -+.+.|..|++|+|+||.||+++ .+|.+++.|||..+
T Consensus 69 ~~kl~l~ld~~rgg~lft~l~~~-~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld--~~Ghi~~tdfglsk 145 (612)
T KOG0603|consen 69 DGKLYLILDFLRGGDLFTRLSKE-VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLL--LEGHIKLTDFGLSK 145 (612)
T ss_pred ccchhHhhhhcccchhhhccccC-CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeec--ccCccccCCchhhh
Confidence 67789999999997664332111 111222222223332 37888999999999999999999 45899999999998
Q ss_pred ccCHHHHH
Q 005995 317 KLSSSMKQ 324 (666)
Q Consensus 317 ~l~~~~~~ 324 (666)
..-+....
T Consensus 146 e~v~~~~~ 153 (612)
T KOG0603|consen 146 EAVKEKIA 153 (612)
T ss_pred HhHhhhhc
Confidence 87555444
No 491
>PTZ00296 choline kinase; Provisional
Probab=95.19 E-value=0.28 Score=53.98 Aligned_cols=114 Identities=12% Similarity=0.098 Sum_probs=70.3
Q ss_pred HHHHHHHhhc-CCCCCHHHHHHHHHHHhCCChhcc-ccccCccccccceeeeeEEEEecC---------CCEEEEEeeCC
Q 005995 84 ISLLKQLQDS-LPPRPVQEVSQTIEREFGESMGGM-FMDFVETPLATASIAQVHRATLVD---------GRQVVVKVQHQ 152 (666)
Q Consensus 84 ~~~l~~l~d~-~~~~~~~~~~~~l~~~~g~~~~~~-f~~~~~~pi~sgs~gqV~~a~l~~---------g~~VAVKv~~p 152 (666)
.++|+.+... .+-...+.+..++.+..+ .|..+ -++++-+|+..|=--++|+.+..+ ++.|+++|..+
T Consensus 70 ~~~l~~~~~~~~~~~~~~~~~~i~~~~vp-~W~~~~~~~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~ 148 (442)
T PTZ00296 70 KNDIPLCAQEFSDLTDPLYIKKICLEKVP-EWRRFTEDDVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGK 148 (442)
T ss_pred hhhhhHHHHhhcccCChHHHHHHHHHHCC-ccccCCcccEEEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCC
Confidence 3445544444 334456666666665543 24321 124566789888888999998652 46899999877
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHhchhhhcHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCccee
Q 005995 153 GIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVL 232 (666)
Q Consensus 153 ~~~~~~~~dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (666)
+....+ |-..|..+...+.+. -.
T Consensus 149 ~te~lI--------------------------------------dR~~E~~v~~~ls~~-------------------gi 171 (442)
T PTZ00296 149 DVDELY--------------------------------------NPISEFEVYKTMSKY-------------------RI 171 (442)
T ss_pred Ccccee--------------------------------------CHHHHHHHHHHHHHC-------------------CC
Confidence 654322 223456666666541 12
Q ss_pred eeeeeecCCCeeEeeecCCccCC
Q 005995 233 IPEVIQSSETVLILEFMDGIRLN 255 (666)
Q Consensus 233 vP~~~~~~~~vLvmE~i~G~~L~ 255 (666)
-|+++.....+.+.||++|.++.
T Consensus 172 ~P~l~~~f~gg~I~efi~g~~l~ 194 (442)
T PTZ00296 172 APQLLNTFSGGRIEEWLYGDPLR 194 (442)
T ss_pred CCceEEEeCCCEEEEeeCCccCC
Confidence 35666655678899999998665
No 492
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=94.77 E-value=0.035 Score=53.66 Aligned_cols=85 Identities=16% Similarity=0.200 Sum_probs=54.9
Q ss_pred eeeeeeecCCCeeEeeecCCccCCCh----hhHHHcC-CCHHHHHHHHHHHHHHHhhh---cCccccCCCcCceEEeeCC
Q 005995 232 LIPEVIQSSETVLILEFMDGIRLNDC----ESLEAFG-VNKQKVVEEITRAYAHQIYV---DGFFNGDPHPGNFLVSKDP 303 (666)
Q Consensus 232 ~vP~~~~~~~~vLvmE~i~G~~L~~~----~~~~~~~-~~~~~~~~~l~~~~l~~i~~---~g~~H~D~hPgNilv~~~~ 303 (666)
++|+++.+-.++.++||++.+++... ....... ..+.+++..++++. +.+.. ..+.-+|++|+|+-|+ .
T Consensus 21 ~~pk~lG~CG~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l-~~l~~~~~~~~~lcDv~~~nfgv~--~ 97 (188)
T PF12260_consen 21 PFPKLLGSCGRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELL-EELDHGPLGFFYLCDVSPDNFGVN--D 97 (188)
T ss_pred CCCCeeeECCCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHH-HHHhcCCCCcEEEeecchHHeEEe--C
Confidence 89999986667889999987655311 0000000 01234444555443 22222 4588899999999999 4
Q ss_pred CCceEEEecccccccC
Q 005995 304 PHRPILLDFGLTKKLS 319 (666)
Q Consensus 304 ~~~i~liDFG~~~~l~ 319 (666)
+|+++++|...+...+
T Consensus 98 ~~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 98 DGRLKLIDLDDVFVED 113 (188)
T ss_pred CCcEEEEechhcchhH
Confidence 5899999999876553
No 493
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=94.74 E-value=0.29 Score=47.52 Aligned_cols=25 Identities=28% Similarity=0.379 Sum_probs=22.8
Q ss_pred ccccccee-eeeEEEEecCCCEEEEEe
Q 005995 124 TPLATASI-AQVHRATLVDGRQVVVKV 149 (666)
Q Consensus 124 ~pi~sgs~-gqV~~a~l~~g~~VAVKv 149 (666)
+-+|.|+- |.|++++. +|+..|+|+
T Consensus 43 efLg~g~~~~~V~kv~I-~g~~YALKl 68 (207)
T PF13095_consen 43 EFLGHGSHDGYVFKVEI-DGRIYALKL 68 (207)
T ss_pred eecCCCCceeEEEEEEE-CCeEEEEEE
Confidence 45899999 99999997 799999999
No 494
>PRK10793 D-alanyl-D-alanine carboxypeptidase fraction A; Provisional
Probab=94.59 E-value=0.034 Score=60.12 Aligned_cols=67 Identities=22% Similarity=0.245 Sum_probs=49.3
Q ss_pred ECCeEEEEeeeeccCCCCCCCCCCCCceeecCCcHHHHHHHHHHHHHcCCCCCCCccc--ccc-----ccCc------cC
Q 005995 504 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA--NIW-----PEFK------SN 570 (666)
Q Consensus 504 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SvsK~~ta~~i~~lve~G~l~ldd~v~--~yl-----p~~~------~~ 570 (666)
..|+++|+ -++|...++||+||.+|+.+++..+++|+++||++|. +.. |... -.
T Consensus 55 ~tG~vL~~-------------knad~~~~pASlTKlMTa~lvleai~~g~l~ld~~v~vs~~a~~~~~~~~~g~s~~~l~ 121 (403)
T PRK10793 55 NSGKVLAE-------------QNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTVGNDAWATGNPVFKGSSLMFLK 121 (403)
T ss_pred CCCcEehh-------------cCcCCCcCCHHHHHHHHHHHHHHHHHcCCCCCCCEEEECHHHHhhcccccCCcceeccc
Confidence 56888872 2567778999999999999999999999999999874 211 1110 11
Q ss_pred CCCcccHHHHhcC
Q 005995 571 GKDLIKVHHVLNH 583 (666)
Q Consensus 571 ~~~~iTi~~LLth 583 (666)
..+.+|+++||.-
T Consensus 122 ~Ge~~tv~dLL~~ 134 (403)
T PRK10793 122 PGMQVPVSQLIRG 134 (403)
T ss_pred CCCEEEHHHHHHH
Confidence 2367899999863
No 495
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=94.18 E-value=0.0075 Score=65.25 Aligned_cols=76 Identities=18% Similarity=0.243 Sum_probs=50.8
Q ss_pred CeeEeeecCCccCCChhhHHHcCCCHHHHHHHHHHHHHHHhhh----cCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYV----DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 242 ~vLvmE~i~G~~L~~~~~~~~~~~~~~~~~~~l~~~~l~~i~~----~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
.++.|++|+-.+|.++..-+..+-.+. ..+..-+++|+-. .|.+|+|+||.||+... +.+++|.|||++..
T Consensus 331 lyI~Mn~c~~~tledWl~rr~~~e~~s---~s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~--d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 331 LYIQMNLCEKETLEDWLRRRRTGEERS---LSLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSD--DDQLKIGDFGLVTS 405 (516)
T ss_pred hhhhhhhhhhhhHHHHhhCCCcccccc---hhHHHHHHHhhccchhhccchhhhcccccccccc--chhhhhhhhhheee
Confidence 468999999999988853122111111 1112222333332 89999999999999984 46899999999988
Q ss_pred cCHHH
Q 005995 318 LSSSM 322 (666)
Q Consensus 318 l~~~~ 322 (666)
.+...
T Consensus 406 ~~~~~ 410 (516)
T KOG1033|consen 406 QDKDE 410 (516)
T ss_pred cccCC
Confidence 76544
No 496
>PF00768 Peptidase_S11: D-alanyl-D-alanine carboxypeptidase This is family S11 in the peptidase classification. ; InterPro: IPR001967 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S11 (D-Ala-D-Ala carboxypeptidase A family, clan SE). The protein fold of the peptidase domain for members of this family resembles that of D-Ala-D-Ala-carboxypeptidase B, the type example for clan SE. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endo-peptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S27) of serine protease have been identified, these being grouped into 6 clans (SA, SB, SC, SE, SF and SG) on the basis of structural similarity and other functional evidence. Structures are known for four of the clans (SA, SB, SC and SE): these appear to be totally unrelated, suggesting at least four evolutionary origins of serine peptidases and possibly many more []. Not with standing their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C clans have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (SA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. Bacterial cell walls are complex structures containing amino acids and amino sugars, with alternating chains of N-acetylglucosamine and N-acetyl-muramic acid units linked by short peptides []: the link peptide in Escherichia coli is L-alanyl-D-isoglutamyl-L-meso-diaminopimelyl-D-alanine. The chains are usually cross-linked between the carboxyl of D-alanine and the free amino group of diaminopimelate. During the synthesis of peptidoglycan, the precursor has the described tetramer sequence with an added C-terminal D-alanine []. D-Ala-D-Ala carboxypeptidase A is involved in the metabolism of cell components []; it is synthesised with a leader peptide to target it to the cell membrane []. After cleavage of the leader peptide, the enzyme is retained in the membrane by a C-terminal anchor. There are three families of serine-type D-Ala-D-Ala peptidase, which are also known as low molecular weight penicillin-binding proteins. Family S11 contains only D-Ala-D-Ala peptidases, unlike families S12 and S13, which contain other enzymes, such as class C beta-lactamases and D-amino-peptidases []. Although these enzymes are serine proteases, some members of family S11 are partially inhibited by thiol-blocking agents [].; GO: 0009002 serine-type D-Ala-D-Ala carboxypeptidase activity, 0006508 proteolysis; PDB: 2BCF_A 1TVF_A 3MFD_B 1ES3_A 1ESI_A 1ES4_A 1ES2_A 1SKF_A 1ES5_A 1J9M_A ....
Probab=94.09 E-value=0.065 Score=53.94 Aligned_cols=53 Identities=25% Similarity=0.338 Sum_probs=41.2
Q ss_pred cceEEEEE--ECCeEEEEeeeeccCCCCCCCCCCCCceeecCCcHHHHHHHHHHHHHcCCCCCCCccc
Q 005995 496 LGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (666)
Q Consensus 496 ~G~~v~v~--~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SvsK~~ta~~i~~lve~G~l~ldd~v~ 561 (666)
.+-+..++ ..|+++|++ +++..+++||+||.+|+.+++..+++|+|+++++|.
T Consensus 10 ~a~saiv~d~~tG~iL~~k-------------n~~~~~~~ASlTKlmTa~~~le~~~~~~l~~~~~v~ 64 (240)
T PF00768_consen 10 SAKSAIVMDADTGKILYSK-------------NADEKRPPASLTKLMTAYVVLEAIKNGKLSLDDKVT 64 (240)
T ss_dssp SSSEEEEEETTTSEEEEEE-------------STTSEBE-GGGHHHHHHHHHHHHHHTTSSTTTCEEE
T ss_pred cceEEEEEECCCCcChhhc-------------ccCceechhhHHHHHHHHHHHHHHHcCCCCcccccc
Confidence 33344444 358888732 567889999999999999999999999999999864
No 497
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=94.03 E-value=0.11 Score=54.34 Aligned_cols=30 Identities=23% Similarity=0.357 Sum_probs=25.7
Q ss_pred cCccccCCCcCceEEeeCCCCceEEEecccccc
Q 005995 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (666)
Q Consensus 285 ~g~~H~D~hPgNilv~~~~~~~i~liDFG~~~~ 317 (666)
.|++|+|+|++||+++ + +.+.+|||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~--~-~~i~lIDfd~~~~ 216 (313)
T TIGR02906 187 RGFCHQDYAYHNILLK--D-NEVYVIDFDYCTI 216 (313)
T ss_pred CceEcCCCCcccEEEe--C-CcEEEEECccccc
Confidence 5899999999999998 3 5799999997653
No 498
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=94.02 E-value=0.043 Score=53.48 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=30.2
Q ss_pred cCccccCCCcCceEEeeCCCC---ceEEEecccccccCHH
Q 005995 285 DGFFNGDPHPGNFLVSKDPPH---RPILLDFGLTKKLSSS 321 (666)
Q Consensus 285 ~g~~H~D~hPgNilv~~~~~~---~i~liDFG~~~~l~~~ 321 (666)
..+.|+|++++||++..+++| .+.++||..++.-++.
T Consensus 120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~ 159 (196)
T smart00587 120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPA 159 (196)
T ss_pred eEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChH
Confidence 579999999999999854334 6899999999876653
No 499
>KOG3021 consensus Predicted kinase [General function prediction only]
Probab=92.96 E-value=0.59 Score=45.40 Aligned_cols=27 Identities=26% Similarity=0.458 Sum_probs=21.5
Q ss_pred cCccccCCCcCceEEeeCCCCceEEEecc
Q 005995 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFG 313 (666)
Q Consensus 285 ~g~~H~D~hPgNilv~~~~~~~i~liDFG 313 (666)
..++|+|+..||+--| +.+.++|.|=.
T Consensus 210 PaLlHGDLW~GNva~D--~~~ePiIfDPa 236 (313)
T KOG3021|consen 210 PALLHGDLWSGNVAED--GAGEPIIFDPA 236 (313)
T ss_pred hhhhccccccCccccc--CCCCceEeCch
Confidence 4689999999997766 56788888843
No 500
>PRK10001 D-alanyl-D-alanine carboxypeptidase fraction C; Provisional
Probab=92.95 E-value=0.062 Score=57.97 Aligned_cols=67 Identities=19% Similarity=0.239 Sum_probs=48.7
Q ss_pred ECCeEEEEeeeeccCCCCCCCCCCCCceeecCCcHHHHHHHHHHHHHcCCCCCCCccc--ccc-----ccCc------cC
Q 005995 504 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA--NIW-----PEFK------SN 570 (666)
Q Consensus 504 ~~g~~v~~~~~G~~~~~~~~~~~~~t~f~i~SvsK~~ta~~i~~lve~G~l~ldd~v~--~yl-----p~~~------~~ 570 (666)
..|+++|+ -++|..+++||+||.+|+.+++..+++|+++|||.|. +.. |... -.
T Consensus 48 ~TG~vL~~-------------knad~~~~pAS~TKlMTa~v~~e~i~~g~l~ldd~v~vs~~a~~~~~~~~~g~S~~~L~ 114 (400)
T PRK10001 48 ASGKVLAE-------------GNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLK 114 (400)
T ss_pred CCCcChhh-------------cCcCCCcCchHHHHHHHHHHHHHHHHcCCCCCCCEEEECHHHHhccccccCCCceeeec
Confidence 46888762 2566779999999999999999999999999999763 111 1110 11
Q ss_pred CCCcccHHHHhcC
Q 005995 571 GKDLIKVHHVLNH 583 (666)
Q Consensus 571 ~~~~iTi~~LLth 583 (666)
..+.+|++|||.-
T Consensus 115 ~Ge~~tv~dLl~a 127 (400)
T PRK10001 115 PGDQVSVADLNKG 127 (400)
T ss_pred CCCEEEHHHHHHH
Confidence 2367899998864
Done!