BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005999
(665 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 149/296 (50%), Gaps = 29/296 (9%)
Query: 379 GESEVYSLEQLMRAS-----AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEA 433
G+ + +SL +L AS +LGRG G YK L + +V VKR +T +
Sbjct: 15 GQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQ- 73
Query: 434 FEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTS 493
F+ +E + H NL+ +R + ERL++Y Y NGS+ + + R PL W
Sbjct: 74 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPK 132
Query: 494 CLKIAEDVAQGLAYIHRAS--WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP 551
+IA A+GLAY+H +IH ++K++N+LL +FEA + D+
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 192
Query: 552 DTV----AYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPD---MLEW 604
V + APE S+ +++ K+DV+ +GV+LLEL+TG+ LA D +L+W
Sbjct: 193 XAVRGXIGHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251
Query: 605 VRTMRVDDGRE------------ENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ 648
V+ + + E + + L +VA +C+ SP +RP M +V++M++
Sbjct: 252 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 151/296 (51%), Gaps = 29/296 (9%)
Query: 379 GESEVYSLEQLMRAS-----AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEA 433
G+ + +SL +L AS +LGRG G YK L + +V VKR + +
Sbjct: 23 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQ- 81
Query: 434 FEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTS 493
F+ +E + H NL+ +R + ERL++Y Y NGS+ + + R PL W
Sbjct: 82 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPK 140
Query: 494 CLKIAEDVAQGLAYIHRAS--WLIHGNLKSSNVLLGADFEARLTDY----CXXXXXXXXX 547
+IA A+GLAY+H +IH ++K++N+LL +FEA + D+
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 200
Query: 548 XXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPD---MLEW 604
T+ + APE S+ +++ K+DV+ +GV+LLEL+TG+ LA D +L+W
Sbjct: 201 XAVRGTIGHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 259
Query: 605 VRTMRVDDGRE------------ENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ 648
V+ + + E + + L +VA +C+ SP +RP M +V++M++
Sbjct: 260 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDA--NKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
+G G G YK ++N V VK+ A + T + + F+Q ++ + H NLV +
Sbjct: 39 MGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
+ + ++Y Y PNGSL + + S PL W KIA+ A G+ ++H +
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLHE-NHH 154
Query: 515 IHGNLKSSNVLLGADFEARLTDY-----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRAT 569
IH ++KS+N+LL F A+++D+ T AY APE + T
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG--EIT 212
Query: 570 SKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTM-------------RVDDGREE 616
KSD+Y+FGV+LLE++TG P+ + P +L+ + +++D
Sbjct: 213 PKSDIYSFGVVLLEIITGL-PAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST 271
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKES 653
+ M + VAS C + +RP + +V +++QE+ S
Sbjct: 272 SVEAMYS-VASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 135/277 (48%), Gaps = 28/277 (10%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDA--NKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
+G G G YK ++N V VK+ A + T + + F+Q ++ + H NLV +
Sbjct: 39 MGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
+ + ++Y Y PNGSL + + S PL W KIA+ A G+ ++H +
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLHE-NHH 154
Query: 515 IHGNLKSSNVLLGADFEARLTDY-----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRAT 569
IH ++KS+N+LL F A+++D+ T AY APE + T
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG--EIT 212
Query: 570 SKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTM-------------RVDDGREE 616
KSD+Y+FGV+LLE++TG P+ + P +L+ + +++D
Sbjct: 213 PKSDIYSFGVVLLEIITGL-PAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST 271
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKES 653
+ M + VAS C + +RP + +V +++QE+ S
Sbjct: 272 SVEAMYS-VASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 136/277 (49%), Gaps = 28/277 (10%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDA--NKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
+G G G YK ++N V VK+ A + T + + F+Q ++ + H NLV +
Sbjct: 33 MGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
+ + ++Y Y PNGSL + + S PL W KIA+ A G+ ++H +
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLHE-NHH 148
Query: 515 IHGNLKSSNVLLGADFEARLTDY-----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRAT 569
IH ++KS+N+LL F A+++D+ T AY APE + T
Sbjct: 149 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG--EIT 206
Query: 570 SKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTM-------------RVDDGREE 616
KSD+Y+FGV+LLE++TG P+ + P +L+ + +++D
Sbjct: 207 PKSDIYSFGVVLLEIITGL-PAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST 265
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKES 653
+ M + VAS C + +RP + +V +++QE+ S
Sbjct: 266 SVEAMYS-VASQCLHEKKNKRPDIKKVQQLLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 128/277 (46%), Gaps = 30/277 (10%)
Query: 398 GRGSIGTTYKAVLDNHLIVTVKRFDA--NKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
G G G YK ++N V VK+ A + T + + F+Q ++ H NLV + +
Sbjct: 31 GEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ ++Y Y PNGSL + + S PL W KIA+ A G+ ++H + I
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPPLSWHXRCKIAQGAANGINFLHE-NHHI 146
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-----TVAYKAPEIRKSSRRATS 570
H ++KS+N+LL F A+++D+ T AY APE + T
Sbjct: 147 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG--EITP 204
Query: 571 KSDVYAFGVLLLELLTGKHPSQHPYLAPPDML--------------EWVRTMRVDDGREE 616
KSD+Y+FGV+LLE++TG P+ + P +L +++ D +
Sbjct: 205 KSDIYSFGVVLLEIITGL-PAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXND--ADS 261
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKES 653
+ VAS C + +RP + +V +++QE S
Sbjct: 262 TSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQEXTAS 298
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 132/283 (46%), Gaps = 30/283 (10%)
Query: 396 LLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTS--AEAFEQHMEAVGGLSHPNLVPIR 453
L+G G G YK VL + V +KR +T ++S E FE +E + HP+LV +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKR----RTPESSQGIEEFETEIETLSFCRHPHLVSLI 101
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
+ + E ++IY Y NG+L ++GS + + W L+I A+GL Y+H +
Sbjct: 102 GFCDERNEMILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRLEICIGAARGLHYLHTRA- 159
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSSRRA 568
+IH ++KS N+LL +F ++TD+ T+ Y PE R
Sbjct: 160 IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKG-RL 218
Query: 569 TSKSDVYAFGVLLLELLTGKH------PSQHPYLAP-------PDMLEWVRTMRVDDGRE 615
T KSDVY+FGV+L E+L + P + LA LE + + D
Sbjct: 219 TEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIR 278
Query: 616 ENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ---EIKESVM 655
L + A C S E RP+M VL ++ ++ESV+
Sbjct: 279 PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 132/283 (46%), Gaps = 30/283 (10%)
Query: 396 LLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTS--AEAFEQHMEAVGGLSHPNLVPIR 453
L+G G G YK VL + V +KR +T ++S E FE +E + HP+LV +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKR----RTPESSQGIEEFETEIETLSFCRHPHLVSLI 101
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
+ + E ++IY Y NG+L ++GS + + W L+I A+GL Y+H +
Sbjct: 102 GFCDERNEMILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRLEICIGAARGLHYLHTRA- 159
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSSRRA 568
+IH ++KS N+LL +F ++TD+ T+ Y PE R
Sbjct: 160 IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKG-RL 218
Query: 569 TSKSDVYAFGVLLLELLTGKH------PSQHPYLAP-------PDMLEWVRTMRVDDGRE 615
T KSDVY+FGV+L E+L + P + LA LE + + D
Sbjct: 219 TEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIR 278
Query: 616 ENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ---EIKESVM 655
L + A C S E RP+M VL ++ ++ESV+
Sbjct: 279 PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 33/254 (12%)
Query: 416 VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLF 475
V +KR + K TS + + ++A+ HPN+V F K E ++ GS+
Sbjct: 43 VAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 101
Query: 476 NLIHGSRSIRAKPLHWTSCLK------IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD 529
++I + I AK H + L I +V +GL Y+H+ IH ++K+ N+LLG D
Sbjct: 102 DII---KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGED 157
Query: 530 FEARLTDYCXXXXXXXXXXXXPDTV--------AYKAPEIRKSSRRATSKSDVYAFGVLL 581
++ D+ + V + APE+ + R K+D+++FG+
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 217
Query: 582 LELLTGKHPSQHPYLAPPDMLEWVRTMR---------VDDGREENRLGM-LTEVASVCSL 631
+EL TG P H Y P M + T++ V D + G ++ S+C
Sbjct: 218 IELATGAAP-YHKY---PPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQ 273
Query: 632 KSPEQRPAMWQVLK 645
K PE+RP ++L+
Sbjct: 274 KDPEKRPTAAELLR 287
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 126/263 (47%), Gaps = 22/263 (8%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E++GRG+ G KA V +K+ ++ ++ +AF + + ++HPN+V +
Sbjct: 15 EVVGRGAFGVVCKAKWRAK-DVAIKQIES----ESERKAFIVELRQLSRVNHPNIV--KL 67
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSI----RAKPLHWTSCLKIAEDVAQGLAYIH- 509
Y ++ +Y GSL+N++HG+ + A + W CL+ +QG+AY+H
Sbjct: 68 YGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW--CLQ----CSQGVAYLHS 121
Query: 510 -RASWLIHGNLKSSNVLLGADFEA-RLTDYCXXXXXXXXXXXXPDTVAYKAPEIRKSSRR 567
+ LIH +LK N+LL A ++ D+ + A+ APE+ + S
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNY 181
Query: 568 ATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVAS 627
+ K DV+++G++L E++T + P P + W +N + + +
Sbjct: 182 -SEKCDVFSWGIILWEVITRRKPFDE-IGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMT 239
Query: 628 VCSLKSPEQRPAMWQVLKMIQEI 650
C K P QRP+M +++K++ +
Sbjct: 240 RCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 33/254 (12%)
Query: 416 VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLF 475
V +KR + K TS + + ++A+ HPN+V F K E ++ GS+
Sbjct: 38 VAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 96
Query: 476 NLIHGSRSIRAKPLHWTSCLK------IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD 529
++I + I AK H + L I +V +GL Y+H+ IH ++K+ N+LLG D
Sbjct: 97 DII---KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGED 152
Query: 530 FEARLTDYCXXXXXXXXXXXXPDTV--------AYKAPEIRKSSRRATSKSDVYAFGVLL 581
++ D+ + V + APE+ + R K+D+++FG+
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 212
Query: 582 LELLTGKHPSQHPYLAPPDMLEWVRTMR---------VDDGREENRLGM-LTEVASVCSL 631
+EL TG P H Y P M + T++ V D + G ++ S+C
Sbjct: 213 IELATGAAP-YHKY---PPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQ 268
Query: 632 KSPEQRPAMWQVLK 645
K PE+RP ++L+
Sbjct: 269 KDPEKRPTAAELLR 282
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 126/263 (47%), Gaps = 22/263 (8%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E++GRG+ G KA V +K+ ++ ++ +AF + + ++HPN+V +
Sbjct: 14 EVVGRGAFGVVCKAKWRAK-DVAIKQIES----ESERKAFIVELRQLSRVNHPNIV--KL 66
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSI----RAKPLHWTSCLKIAEDVAQGLAYIH- 509
Y ++ +Y GSL+N++HG+ + A + W CL+ +QG+AY+H
Sbjct: 67 YGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW--CLQ----CSQGVAYLHS 120
Query: 510 -RASWLIHGNLKSSNVLLGADFEA-RLTDYCXXXXXXXXXXXXPDTVAYKAPEIRKSSRR 567
+ LIH +LK N+LL A ++ D+ + A+ APE+ + S
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNY 180
Query: 568 ATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVAS 627
+ K DV+++G++L E++T + P P + W +N + + +
Sbjct: 181 -SEKCDVFSWGIILWEVITRRKPFDE-IGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMT 238
Query: 628 VCSLKSPEQRPAMWQVLKMIQEI 650
C K P QRP+M +++K++ +
Sbjct: 239 RCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 117/255 (45%), Gaps = 27/255 (10%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG G G + + H V VK K S +AF + L H LV R
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLV--R 68
Query: 454 AYFQAKGERL-VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
Y E + +I +Y NGSL + + I+ L L +A +A+G+A+I +
Sbjct: 69 LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN 125
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRA 568
+ IH NL+++N+L+ ++ D+ + + + APE
Sbjct: 126 Y-IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-F 183
Query: 569 TSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV----RTMRVDDGREENRLGMLT 623
T KSDV++FG+LL E++T G+ P +P + P++++ + R +R D+ EE L
Sbjct: 184 TIKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQNLERGYRMVRPDNCPEE-----LY 236
Query: 624 EVASVCSLKSPEQRP 638
++ +C + PE RP
Sbjct: 237 QLMRLCWKERPEDRP 251
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 127/274 (46%), Gaps = 20/274 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E +G GS GT ++A + + + A+ E F + + + L HPN+V
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNE-FLREVAIMKRLRHPNIVLFMG 101
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH-RASW 513
++ +Y GSL+ L+H S + + L L +A DVA+G+ Y+H R
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXXXX---XXXXPDTVAYKAPEIRKSSRRATS 570
++H NLKS N+L+ + ++ D+ T + APE+ + +
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEP-SNE 218
Query: 571 KSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWV--RTMRVDDGREENRLGMLTEVASV 628
KSDVY+FGV+L EL T + P + L P ++ V + R++ R N +VA++
Sbjct: 219 KSDVYSFGVILWELATLQQPWGN--LNPAQVVAAVGFKCKRLEIPRNLN-----PQVAAI 271
Query: 629 ---CSLKSPEQRPAMWQVLKMIQEIKESVMAEDN 659
C P +RP+ ++ +++ + +S + N
Sbjct: 272 IEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPN 305
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 124/263 (47%), Gaps = 19/263 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
+G G G + N V +K K S + F + E + LSHP LV +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTI---KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +++++ +G L + + R + A CL DV +G+AY+ A +IH
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL----DVCEGMAYLEEAC-VIH 146
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L + N L+G + +++D+ V + +PE+ SR +SKS
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY-SSKS 205
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCS 630
DV++FGVL+ E+ + GK P ++ + +++E + T R+ R + + ++ + C
Sbjct: 206 DVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLYKPRLAST--HVYQIMNHCW 261
Query: 631 LKSPEQRPAMWQVLKMIQEIKES 653
+ PE RPA ++L+ + EI ES
Sbjct: 262 KERPEDRPAFSRLLRQLAEIAES 284
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 124/263 (47%), Gaps = 19/263 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
+G G G + N V +K + S E F + E + LSHP LV +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +++++ +G L + + R + A CL DV +G+AY+ A +IH
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL----DVCEGMAYLEEAC-VIH 124
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L + N L+G + +++D+ V + +PE+ SR +SKS
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY-SSKS 183
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCS 630
DV++FGVL+ E+ + GK P ++ + +++E + T R+ R + + ++ + C
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLYKPRLAST--HVYQIMNHCW 239
Query: 631 LKSPEQRPAMWQVLKMIQEIKES 653
+ PE RPA ++L+ + EI ES
Sbjct: 240 KERPEDRPAFSRLLRQLAEIAES 262
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 124/263 (47%), Gaps = 19/263 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
+G G G + N V +K + S E F + E + LSHP LV +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +++++ +G L + + R + A CL DV +G+AY+ A +IH
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL----DVCEGMAYLEEAC-VIH 129
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L + N L+G + +++D+ V + +PE+ S R +SKS
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS-RYSSKS 188
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCS 630
DV++FGVL+ E+ + GK P ++ + +++E + T R+ R + + ++ + C
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLYKPRLAST--HVYQIMNHCW 244
Query: 631 LKSPEQRPAMWQVLKMIQEIKES 653
+ PE RPA ++L+ + EI ES
Sbjct: 245 RERPEDRPAFSRLLRQLAEIAES 267
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 124/263 (47%), Gaps = 19/263 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
+G G G + N V +K + S E F + E + LSHP LV +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +++++ +G L + + R + A CL DV +G+AY+ A +IH
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL----DVCEGMAYLEEAC-VIH 126
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L + N L+G + +++D+ V + +PE+ SR +SKS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY-SSKS 185
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCS 630
DV++FGVL+ E+ + GK P ++ + +++E + T R+ R + + ++ + C
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLYKPRLAST--HVYQIMNHCW 241
Query: 631 LKSPEQRPAMWQVLKMIQEIKES 653
+ PE RPA ++L+ + EI ES
Sbjct: 242 KERPEDRPAFSRLLRQLAEIAES 264
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
+ +G GS GT YK H V VK + +AF+ + + H N++
Sbjct: 18 GQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
Y K + ++ + SL++ +H I + IA AQG+ Y+H S
Sbjct: 76 GY-STKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS- 129
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXX-----XXXXXXPDTVAYKAPE-IRKSSRR 567
+IH +LKS+N+ L D ++ D+ ++ + APE IR +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 568 ATS-KSDVYAFGVLLLELLTGKHP 590
S +SDVYAFG++L EL+TG+ P
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
+ +G GS GT YK H V VK + +AF+ + + H N++
Sbjct: 13 GQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
Y K + ++ + SL++ +H I + IA AQG+ Y+H S
Sbjct: 71 GY-STKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS- 124
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXX-----XXXXXXPDTVAYKAPE-IRKSSRR 567
+IH +LKS+N+ L D ++ D+ ++ + APE IR +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 568 ATS-KSDVYAFGVLLLELLTGKHP 590
S +SDVYAFG++L EL+TG+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 27/255 (10%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG G G + + H V VK K S +AF + L H LV R
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLV--R 81
Query: 454 AYFQAKGERL-VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
Y E + +I +Y NGSL + + I+ L L +A +A+G+A+I +
Sbjct: 82 LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN 138
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRA 568
+ IH +L+++N+L+ ++ D+ + + + APE
Sbjct: 139 Y-IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-F 196
Query: 569 TSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV----RTMRVDDGREENRLGMLT 623
T KSDV++FG+LL E++T G+ P +P + P++++ + R +R D+ EE L
Sbjct: 197 TIKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQNLERGYRMVRPDNCPEE-----LY 249
Query: 624 EVASVCSLKSPEQRP 638
++ +C + PE RP
Sbjct: 250 QLMRLCWKERPEDRP 264
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 27/257 (10%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG G G + + H V VK K S +AF + L H LV R
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLV--R 80
Query: 454 AYFQAKGERL-VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
Y E + +I +Y NGSL + + I+ L L +A +A+G+A+I +
Sbjct: 81 LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN 137
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRA 568
+ IH +L+++N+L+ ++ D+ + + + APE
Sbjct: 138 Y-IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-F 195
Query: 569 TSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV----RTMRVDDGREENRLGMLT 623
T KSDV++FG+LL E++T G+ P +P + P++++ + R +R D+ EE L
Sbjct: 196 TIKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQNLERGYRMVRPDNCPEE-----LY 248
Query: 624 EVASVCSLKSPEQRPAM 640
++ +C + PE RP
Sbjct: 249 QLMRLCWKERPEDRPTF 265
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
+ +G GS GT YK H V VK + +AF+ + + H N++
Sbjct: 15 GQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
Y K + ++ + SL++ +H I + IA AQG+ Y+H S
Sbjct: 73 GY-STKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS- 126
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXX-----XXXXXXPDTVAYKAPE-IRKSSRR 567
+IH +LKS+N+ L D ++ D+ ++ + APE IR +
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 568 ATS-KSDVYAFGVLLLELLTGKHP 590
S +SDVYAFG++L EL+TG+ P
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
+ +G GS GT YK H V VK + +AF+ + + H N++
Sbjct: 13 GQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
Y K + ++ + SL++ +H I + IA AQG+ Y+H S
Sbjct: 71 GY-STKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS- 124
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXX-----XXXXXXPDTVAYKAPE-IRKSSRR 567
+IH +LKS+N+ L D ++ D+ ++ + APE IR +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 568 ATS-KSDVYAFGVLLLELLTGKHP 590
S +SDVYAFG++L EL+TG+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
+ +G GS GT YK H V VK + +AF+ + + H N++
Sbjct: 18 GQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
Y K + ++ + SL++ +H I + IA AQG+ Y+H S
Sbjct: 76 GY-STKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS- 129
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXX-----XXXXXXPDTVAYKAPE-IRKSSRR 567
+IH +LKS+N+ L D ++ D+ ++ + APE IR +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 568 ATS-KSDVYAFGVLLLELLTGKHP 590
S +SDVYAFG++L EL+TG+ P
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
+ +G GS GT YK H V VK + +AF+ + + H N++
Sbjct: 33 GQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
Y K + ++ + SL++ +H I + IA AQG+ Y+H S
Sbjct: 91 GY-STKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS- 144
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXX-----XXXXXXPDTVAYKAPE-IRKSSRR 567
+IH +LKS+N+ L D ++ D+ ++ + APE IR +
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 568 ATS-KSDVYAFGVLLLELLTGKHP 590
S +SDVYAFG++L EL+TG+ P
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
+ +G GS GT YK H V VK + +AF+ + + H N++
Sbjct: 41 GQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
Y K + ++ + SL++ +H I + IA AQG+ Y+H S
Sbjct: 99 GY-STKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS- 152
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXX-----XXXXXXPDTVAYKAPE-IRKSSRR 567
+IH +LKS+N+ L D ++ D+ ++ + APE IR +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 568 ATS-KSDVYAFGVLLLELLTGKHP 590
S +SDVYAFG++L EL+TG+ P
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
+ +G GS GT YK H V VK + +AF+ + + H N++
Sbjct: 40 GQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
Y K + ++ + SL++ +H I + IA AQG+ Y+H S
Sbjct: 98 GY-STKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS- 151
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXX-----XXXXXXPDTVAYKAPE-IRKSSRR 567
+IH +LKS+N+ L D ++ D+ ++ + APE IR +
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 568 ATS-KSDVYAFGVLLLELLTGKHP 590
S +SDVYAFG++L EL+TG+ P
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 19/248 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + L H LV + A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +VI +Y GSL + + G K L + +A +A G+AY+ R ++ +H
Sbjct: 83 SEEPIYIVI-EYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERMNY-VH 137
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR-FTIKS 196
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 197 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 252
Query: 631 LKSPEQRP 638
K PE+RP
Sbjct: 253 RKDPEERP 260
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + L H LV + A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +VI +Y GSL + + G K L + +A +A G+AY+ R ++ +H
Sbjct: 83 SEEPIYIVI-EYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERMNY-VH 137
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 196
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 197 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 252
Query: 631 LKSPEQRP 638
K PE+RP
Sbjct: 253 RKDPEERP 260
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
+ +G GS GT YK H V VK + +AF+ + + H N++
Sbjct: 41 GQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
Y K + ++ + SL++ +H I + IA AQG+ Y+H S
Sbjct: 99 GY-STKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS- 152
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXX-----XXXXXXPDTVAYKAPE-IRKSSRR 567
+IH +LKS+N+ L D ++ D+ ++ + APE IR +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 568 ATS-KSDVYAFGVLLLELLTGKHP 590
S +SDVYAFG++L EL+TG+ P
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 27/257 (10%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG G G + + H V VK K S +AF + L H LV R
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLV--R 78
Query: 454 AYFQAKGERL-VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
Y E + +I +Y NGSL + + I+ L L +A +A+G+A+I +
Sbjct: 79 LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN 135
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRA 568
+ IH +L+++N+L+ ++ D+ + + + APE
Sbjct: 136 Y-IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-F 193
Query: 569 TSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV----RTMRVDDGREENRLGMLT 623
T KSDV++FG+LL E++T G+ P +P + P++++ + R +R D+ EE L
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQNLERGYRMVRPDNCPEE-----LY 246
Query: 624 EVASVCSLKSPEQRPAM 640
++ +C + PE RP
Sbjct: 247 QLMRLCWKERPEDRPTF 263
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 117/255 (45%), Gaps = 27/255 (10%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG G G + + H V VK K S +AF + L H LV R
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLV--R 67
Query: 454 AYFQAKGERL-VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
Y E + +I +Y NGSL + + I+ L L +A +A+G+A+I +
Sbjct: 68 LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN 124
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRA 568
+ IH +L+++N+L+ ++ D+ + + + APE
Sbjct: 125 Y-IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-F 182
Query: 569 TSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV----RTMRVDDGREENRLGMLT 623
T KSDV++FG+LL E++T G+ P +P + P++++ + R +R D+ EE L
Sbjct: 183 TIKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQNLERGYRMVRPDNCPEE-----LY 235
Query: 624 EVASVCSLKSPEQRP 638
++ +C + PE RP
Sbjct: 236 QLMRLCWKERPEDRP 250
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 27/257 (10%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG G G + + H V VK K S +AF + L H LV R
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLV--R 72
Query: 454 AYFQAKGERL-VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
Y E + +I +Y NGSL + + I+ L L +A +A+G+A+I +
Sbjct: 73 LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN 129
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRA 568
+ IH +L+++N+L+ ++ D+ + + + APE
Sbjct: 130 Y-IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-F 187
Query: 569 TSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV----RTMRVDDGREENRLGMLT 623
T KSDV++FG+LL E++T G+ P +P + P++++ + R +R D+ EE L
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQNLERGYRMVRPDNCPEE-----LY 240
Query: 624 EVASVCSLKSPEQRPAM 640
++ +C + PE RP
Sbjct: 241 QLMRLCWKERPEDRPTF 257
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 27/257 (10%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG G G + + H V VK K S +AF + L H LV R
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLV--R 78
Query: 454 AYFQAKGERL-VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
Y E + +I +Y NGSL + + I+ L L +A +A+G+A+I +
Sbjct: 79 LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN 135
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRA 568
+ IH +L+++N+L+ ++ D+ + + + APE
Sbjct: 136 Y-IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-F 193
Query: 569 TSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV----RTMRVDDGREENRLGMLT 623
T KSDV++FG+LL E++T G+ P +P + P++++ + R +R D+ EE L
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQNLERGYRMVRPDNCPEE-----LY 246
Query: 624 EVASVCSLKSPEQRPAM 640
++ +C + PE RP
Sbjct: 247 QLMRLCWKERPEDRPTF 263
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 27/255 (10%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG G G + + H V VK K S +AF + L H LV R
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLV--R 74
Query: 454 AYFQAKGERL-VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
Y E + +I +Y NGSL + + I+ L L +A +A+G+A+I +
Sbjct: 75 LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN 131
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRA 568
+ IH +L+++N+L+ ++ D+ + + + APE
Sbjct: 132 Y-IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-F 189
Query: 569 TSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV----RTMRVDDGREENRLGMLT 623
T KSDV++FG+LL E++T G+ P +P + P++++ + R +R D+ EE L
Sbjct: 190 TIKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQNLERGYRMVRPDNCPEE-----LY 242
Query: 624 EVASVCSLKSPEQRP 638
++ +C + PE RP
Sbjct: 243 QLMRLCWKERPEDRP 257
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 27/257 (10%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG G G + + H V VK K S +AF + L H LV R
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLV--R 77
Query: 454 AYFQAKGERL-VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
Y E + +I +Y NGSL + + I+ L L +A +A+G+A+I +
Sbjct: 78 LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN 134
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRA 568
+ IH +L+++N+L+ ++ D+ + + + APE
Sbjct: 135 Y-IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-F 192
Query: 569 TSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV----RTMRVDDGREENRLGMLT 623
T KSDV++FG+LL E++T G+ P +P + P++++ + R +R D+ EE L
Sbjct: 193 TIKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQNLERGYRMVRPDNCPEE-----LY 245
Query: 624 EVASVCSLKSPEQRPAM 640
++ +C + PE RP
Sbjct: 246 QLMRLCWKERPEDRPTF 262
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 27/257 (10%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG G G + + H V VK K S +AF + L H LV R
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLV--R 82
Query: 454 AYFQAKGERL-VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
Y E + +I +Y NGSL + + I+ L L +A +A+G+A+I +
Sbjct: 83 LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN 139
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRA 568
+ IH +L+++N+L+ ++ D+ + + + APE
Sbjct: 140 Y-IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-F 197
Query: 569 TSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV----RTMRVDDGREENRLGMLT 623
T KSDV++FG+LL E++T G+ P +P + P++++ + R +R D+ EE L
Sbjct: 198 TIKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQNLERGYRMVRPDNCPEE-----LY 250
Query: 624 EVASVCSLKSPEQRPAM 640
++ +C + PE RP
Sbjct: 251 QLMRLCWKERPEDRPTF 267
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 27/255 (10%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG G G + + H V VK K S +AF + L H LV R
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLV--R 72
Query: 454 AYFQAKGERL-VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
Y E + +I +Y NGSL + + I+ L L +A +A+G+A+I +
Sbjct: 73 LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN 129
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRA 568
+ IH +L+++N+L+ ++ D+ + + + APE
Sbjct: 130 Y-IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-F 187
Query: 569 TSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV----RTMRVDDGREENRLGMLT 623
T KSDV++FG+LL E++T G+ P +P + P++++ + R +R D+ EE L
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQNLERGYRMVRPDNCPEE-----LY 240
Query: 624 EVASVCSLKSPEQRP 638
++ +C + PE RP
Sbjct: 241 QLMRLCWKERPEDRP 255
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 27/255 (10%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG G G + + H V VK K S +AF + L H LV R
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLV--R 73
Query: 454 AYFQAKGERL-VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
Y E + +I +Y NGSL + + I+ L L +A +A+G+A+I +
Sbjct: 74 LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN 130
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRA 568
+ IH +L+++N+L+ ++ D+ + + + APE
Sbjct: 131 Y-IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-F 188
Query: 569 TSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV----RTMRVDDGREENRLGMLT 623
T KSDV++FG+LL E++T G+ P +P + P++++ + R +R D+ EE L
Sbjct: 189 TIKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQNLERGYRMVRPDNCPEE-----LY 241
Query: 624 EVASVCSLKSPEQRP 638
++ +C + PE RP
Sbjct: 242 QLMRLCWKERPEDRP 256
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 27/257 (10%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG G G + + H V VK K S +AF + L H LV R
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLV--R 72
Query: 454 AYFQAKGERL-VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
Y E + +I +Y NGSL + + I+ L L +A +A+G+A+I +
Sbjct: 73 LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN 129
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRA 568
+ IH +L+++N+L+ ++ D+ + + + APE
Sbjct: 130 Y-IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-F 187
Query: 569 TSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV----RTMRVDDGREENRLGMLT 623
T KSDV++FG+LL E++T G+ P +P + P++++ + R +R D+ EE L
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQNLERGYRMVRPDNCPEE-----LY 240
Query: 624 EVASVCSLKSPEQRPAM 640
++ +C + PE RP
Sbjct: 241 QLMRLCWKERPEDRPTF 257
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
+ +G GS GT YK H V VK + +AF+ + + H N++
Sbjct: 13 GQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
Y A + ++ + SL++ +H I + IA AQG+ Y+H S
Sbjct: 71 GYSTAP-QLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKS- 124
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXX-----XXXXXXPDTVAYKAPE-IRKSSRR 567
+IH +LKS+N+ L D ++ D+ ++ + APE IR +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 568 ATS-KSDVYAFGVLLLELLTGKHP 590
S +SDVYAFG++L EL+TG+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 27/254 (10%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E LG G G + + H V VK K S +AF + L H LV R
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLV--RL 73
Query: 455 YFQAKGERL-VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
Y E + +I +Y NGSL + + I+ L L +A +A+G+A+I ++
Sbjct: 74 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERNY 130
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRAT 569
IH +L+++N+L+ ++ D+ + + + APE T
Sbjct: 131 -IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGT-FT 188
Query: 570 SKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV----RTMRVDDGREENRLGMLTE 624
KSDV++FG+LL E++T G+ P +P + P++++ + R +R D+ EE L +
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIP--YPGMTNPEVIQNLERGYRMVRPDNCPEE-----LYQ 241
Query: 625 VASVCSLKSPEQRP 638
+ +C + PE RP
Sbjct: 242 LMRLCWKERPEDRP 255
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 395 ELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E++G G G Y+A + + + V R D ++ + E Q + L HPN++ +R
Sbjct: 13 EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
+ ++ ++ G L ++ G R ++W A +A+G+ Y+H +
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEAI 126
Query: 514 --LIHGNLKSSNVLLGADFE--------ARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIR 562
+IH +LKSSN+L+ E ++TD+ A+ APE+
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVI 186
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGKHP 590
++S + SDV+++GVLL ELLTG+ P
Sbjct: 187 RASM-FSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 123/263 (46%), Gaps = 19/263 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
+G G G + N V +K + S E F + E + LSHP LV +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ ++ ++ +G L + + R + A CL DV +G+AY+ A +IH
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL----DVCEGMAYLEEAC-VIH 127
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L + N L+G + +++D+ V + +PE+ S R +SKS
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS-RYSSKS 186
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCS 630
DV++FGVL+ E+ + GK P ++ + +++E + T R+ R + + ++ + C
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLYKPRLAST--HVYQIMNHCW 242
Query: 631 LKSPEQRPAMWQVLKMIQEIKES 653
+ PE RPA ++L+ + EI ES
Sbjct: 243 RERPEDRPAFSRLLRQLAEIAES 265
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 20/274 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E +G GS GT ++A + + + A+ E F + + + L HPN+V
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNE-FLREVAIMKRLRHPNIVLFMG 101
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH-RASW 513
++ +Y GSL+ L+H S + + L L +A DVA+G+ Y+H R
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXXXX---XXXXPDTVAYKAPEIRKSSRRATS 570
++H +LKS N+L+ + ++ D+ T + APE+ + +
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEP-SNE 218
Query: 571 KSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWV--RTMRVDDGREENRLGMLTEVASV 628
KSDVY+FGV+L EL T + P + L P ++ V + R++ R N +VA++
Sbjct: 219 KSDVYSFGVILWELATLQQPWGN--LNPAQVVAAVGFKCKRLEIPRNLN-----PQVAAI 271
Query: 629 ---CSLKSPEQRPAMWQVLKMIQEIKESVMAEDN 659
C P +RP+ ++ +++ + +S + N
Sbjct: 272 IEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPN 305
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 115/250 (46%), Gaps = 19/250 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K + S EAF Q + + L H LV + A
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV 249
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
++ ++ +Y GSL + + G K L + +A +A G+AY+ R ++ +H
Sbjct: 250 -SEEPIYIVTEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERMNY-VH 304
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 363
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 364 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 419
Query: 631 LKSPEQRPAM 640
K PE+RP
Sbjct: 420 RKDPEERPTF 429
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
+ +G GS GT YK H V VK + +AF+ + + H N++
Sbjct: 29 GQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
Y K + ++ + SL++ +H S + + IA A+G+ Y+H S
Sbjct: 87 GY-STKPQLAIVTQWCEGSSLYHHLHASET----KFEMKKLIDIARQTARGMDYLHAKS- 140
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXX-----XXXXXXPDTVAYKAPEI--RKSSR 566
+IH +LKS+N+ L D ++ D+ ++ + APE+ + S
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 567 RATSKSDVYAFGVLLLELLTGKHP 590
+ +SDVYAFG++L EL+TG+ P
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 117/249 (46%), Gaps = 21/249 (8%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G G + A + H V VK K S EAF + L H LV + A
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTM---KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 79
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
K +I ++ GSL + + + +PL + + +A+G+A+I + ++ IH
Sbjct: 80 -TKEPIYIITEFMAKGSLLDFLKSDEGSK-QPL--PKLIDFSAQIAEGMAFIEQRNY-IH 134
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPE-IRKSSRRATSK 571
+L+++N+L+ A ++ D+ + + + APE I S T K
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS--FTIK 192
Query: 572 SDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVC 629
SDV++FG+LL+E++T G+ P +P ++ P+++ + R R+ R EN L + C
Sbjct: 193 SDVWSFGILLMEIVTYGRIP--YPGMSNPEVIRALERGYRMP--RPENCPEELYNIMMRC 248
Query: 630 SLKSPEQRP 638
PE+RP
Sbjct: 249 WKNRPEERP 257
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
+ +G GS GT YK H V VK + +AF+ + + H N++
Sbjct: 17 GQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
Y K + ++ + SL++ +H S + + IA A+G+ Y+H S
Sbjct: 75 GY-STKPQLAIVTQWCEGSSLYHHLHASET----KFEMKKLIDIARQTARGMDYLHAKS- 128
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXX-----XXXXXXPDTVAYKAPEI--RKSSR 566
+IH +LKS+N+ L D ++ D+ ++ + APE+ + S
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 567 RATSKSDVYAFGVLLLELLTGKHP 590
+ +SDVYAFG++L EL+TG+ P
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 116/245 (47%), Gaps = 23/245 (9%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G G + A + H V VK K S EAF + L H LV + A
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTM---KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 246
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
K +I ++ GSL + + + +PL + + +A+G+A+I + ++ IH
Sbjct: 247 -TKEPIYIITEFMAKGSLLDFLKSDEGSK-QPL--PKLIDFSAQIAEGMAFIEQRNY-IH 301
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPE-IRKSSRRATSKSDVY 575
+L+++N+L+ A ++ D+ + + APE I S T KSDV+
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARVGAKF------PIKWTAPEAINFGS--FTIKSDVW 353
Query: 576 AFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCSLKS 633
+FG+LL+E++T G+ P +P ++ P+++ + R R+ R EN L + C
Sbjct: 354 SFGILLMEIVTYGRIP--YPGMSNPEVIRALERGYRMP--RPENCPEELYNIMMRCWKNR 409
Query: 634 PEQRP 638
PE+RP
Sbjct: 410 PEERP 414
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + L H LV + A
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +V +Y GSL + + G K L + +A +A G+AY+ R ++ +H
Sbjct: 73 SEEPIXIVT-EYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMNY-VH 127
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR-FTIKS 186
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 187 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 242
Query: 631 LKSPEQRP 638
K PE+RP
Sbjct: 243 RKEPEERP 250
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + L H LV + A
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 71
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
++ ++ +Y GSL + + G K L + +A +A G+AY+ R ++ +H
Sbjct: 72 -SEEPIYIVTEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERMNY-VH 126
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 185
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 186 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 241
Query: 631 LKSPEQRP 638
K PE+RP
Sbjct: 242 RKDPEERP 249
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + L H LV + A
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 75
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
++ ++ +Y GSL + + G K L + +A +A G+AY+ R ++ +H
Sbjct: 76 -SEEPIYIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMNY-VH 130
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 189
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 190 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 245
Query: 631 LKSPEQRP 638
K PE+RP
Sbjct: 246 RKEPEERP 253
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + L H LV + A
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 73
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
++ ++ +Y GSL + + G K L + +A +A G+AY+ R ++ +H
Sbjct: 74 -SEEPIYIVTEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERMNY-VH 128
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 187
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 188 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 243
Query: 631 LKSPEQRP 638
K PE+RP
Sbjct: 244 RKDPEERP 251
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + L H LV + A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
++ ++ +Y GSL + + G K L + +A +A G+AY+ R ++ +H
Sbjct: 83 -SEEPIYIVTEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERMNY-VH 137
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 196
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 197 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 252
Query: 631 LKSPEQRP 638
K PE+RP
Sbjct: 253 RKDPEERP 260
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + L H LV + A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
++ ++ +Y GSL + + G K L + +A +A G+AY+ R ++ +H
Sbjct: 83 -SEEPIYIVCEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERMNY-VH 137
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 196
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 197 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 252
Query: 631 LKSPEQRP 638
K PE+RP
Sbjct: 253 RKDPEERP 260
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 19/250 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + L H LV + A
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
++ ++ +Y GSL + + G K L + +A +A G+AY+ R ++ +H
Sbjct: 249 -SEEPIYIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMNY-VH 303
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 362
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 363 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 418
Query: 631 LKSPEQRPAM 640
K PE+RP
Sbjct: 419 RKEPEERPTF 428
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 19/250 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + L H LV + A
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
++ ++ +Y GSL + + G K L + +A +A G+AY+ R ++ +H
Sbjct: 249 -SEEPIYIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMNY-VH 303
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 362
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 363 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 418
Query: 631 LKSPEQRPAM 640
K PE+RP
Sbjct: 419 RKEPEERPTF 428
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 123/263 (46%), Gaps = 19/263 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
+G G G + N V +K + S E F + E + LSHP LV +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +++++ +G L + + R + A CL DV +G+AY+ AS +IH
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL----DVCEGMAYLEEAS-VIH 126
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L + N L+G + +++D+ V + +PE+ SR +SKS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY-SSKS 185
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCS 630
DV++FGVL+ E+ + GK P ++ + +++E + T R+ R + + ++ + C
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFRLYKPRLAST--HVYQIMNHCW 241
Query: 631 LKSPEQRPAMWQVLKMIQEIKES 653
+ PE RPA ++L+ + I S
Sbjct: 242 KERPEDRPAFSRLLRQLAAIAAS 264
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 117/249 (46%), Gaps = 21/249 (8%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G G + A + H V VK K S EAF + L H LV + A
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTM---KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
K +I ++ GSL + + + +PL + + +A+G+A+I + ++ IH
Sbjct: 253 -TKEPIYIITEFMAKGSLLDFLKSDEGSK-QPL--PKLIDFSAQIAEGMAFIEQRNY-IH 307
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPE-IRKSSRRATSK 571
+L+++N+L+ A ++ D+ + + + APE I S T K
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS--FTIK 365
Query: 572 SDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVC 629
SDV++FG+LL+E++T G+ P +P ++ P+++ + R R+ R EN L + C
Sbjct: 366 SDVWSFGILLMEIVTYGRIP--YPGMSNPEVIRALERGYRMP--RPENCPEELYNIMMRC 421
Query: 630 SLKSPEQRP 638
PE+RP
Sbjct: 422 WKNRPEERP 430
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 113/250 (45%), Gaps = 19/250 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + L H LV + A
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ ++ +Y GSL + + G K L + +A +A G+AY+ R ++ +H
Sbjct: 332 SEE-PIYIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMNY-VH 386
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 445
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 446 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 501
Query: 631 LKSPEQRPAM 640
K PE+RP
Sbjct: 502 RKEPEERPTF 511
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 19/250 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + L H LV + A
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
++ ++ +Y GSL + + G K L + +A +A G+AY+ R ++ +H
Sbjct: 249 -SEEPIYIVGEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMNY-VH 303
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 362
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 363 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 418
Query: 631 LKSPEQRPAM 640
K PE+RP
Sbjct: 419 RKEPEERPTF 428
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
+ +G GS GT YK H V VK + +AF+ + + H N++
Sbjct: 29 GQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
Y A + ++ + SL++ +H S + + IA A+G+ Y+H S
Sbjct: 87 GYSTAP-QLAIVTQWCEGSSLYHHLHASET----KFEMKKLIDIARQTARGMDYLHAKS- 140
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXX-----XXXXXXPDTVAYKAPEI--RKSSR 566
+IH +LKS+N+ L D ++ D+ ++ + APE+ + S
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 567 RATSKSDVYAFGVLLLELLTGKHP 590
+ +SDVYAFG++L EL+TG+ P
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + + H LV + A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV 82
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
++ ++ +Y GSL + + G K L + +A +A G+AY+ R ++ +H
Sbjct: 83 -SEEPIYIVTEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERMNY-VH 137
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 196
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 197 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 252
Query: 631 LKSPEQRP 638
K PE+RP
Sbjct: 253 RKDPEERP 260
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 19/248 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + L H LV + A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +V+ +Y G L + + G K L + +A +A G+AY+ R ++ +H
Sbjct: 83 SEEPIYIVM-EYMSKGCLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERMNY-VH 137
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 196
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 197 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 252
Query: 631 LKSPEQRP 638
K PE+RP
Sbjct: 253 RKDPEERP 260
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 19/248 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + L H LV + A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
++ ++ +Y GSL + + G K L + +A +A G+AY+ R ++ +H
Sbjct: 83 -SEEPIYIVTEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERMNY-VH 137
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L ++N+L+G + ++ D+ + + APE R T KS
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 196
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 197 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 252
Query: 631 LKSPEQRP 638
K PE+RP
Sbjct: 253 RKDPEERP 260
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + L H LV + A
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
++ ++ +Y GSL + + G K L + ++ +A G+AY+ R ++ +H
Sbjct: 80 -SEEPIYIVTEYMNKGSLLDFLKGET---GKYLRLPQLVDMSAQIASGMAYVERMNY-VH 134
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 193
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 194 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 249
Query: 631 LKSPEQRP 638
K PE+RP
Sbjct: 250 RKEPEERP 257
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + L H LV + A
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
++ ++ +Y GSL + + G K L + ++ +A G+AY+ R ++ +H
Sbjct: 80 -SEEPIYIVTEYMNKGSLLDFLKGET---GKYLRLPQLVDMSAQIASGMAYVERMNY-VH 134
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGR-FTIKS 193
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 194 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 249
Query: 631 LKSPEQRP 638
K PE+RP
Sbjct: 250 RKEPEERP 257
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 19/248 (7%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG+G G + + V +K K S EAF Q + + L H LV + A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
++ ++ +Y G L + + G K L + +A +A G+AY+ R ++ +H
Sbjct: 83 -SEEPIYIVTEYMSKGCLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERMNY-VH 137
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++N+L+G + ++ D+ + + APE R T KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR-FTIKS 196
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVCS 630
DV++FG+LL EL T G+ P +P + ++L+ V R R+ E L ++ C
Sbjct: 197 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 252
Query: 631 LKSPEQRP 638
K PE+RP
Sbjct: 253 RKDPEERP 260
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 115/247 (46%), Gaps = 17/247 (6%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G G + + + V +K K S E+F + + + L H LV + A
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTL---KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
++ ++ +Y GSL + + + + L + + +A VA G+AYI R ++ IH
Sbjct: 74 -SEEPIYIVTEYMNKGSLLDFL---KDGEGRALKLPNLVDMAAQVAAGMAYIERMNY-IH 128
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+S+N+L+G ++ D+ + + APE R T KS
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR-FTIKS 187
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSL 631
DV++FG+LL EL+T G+ P +P + ++LE V ++ + L E+ C
Sbjct: 188 DVWSFGILLTELVTKGRVP--YPGMNNREVLEQVERGYRMPCPQDCPIS-LHELMIHCWK 244
Query: 632 KSPEQRP 638
K PE+RP
Sbjct: 245 KDPEERP 251
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 125/297 (42%), Gaps = 36/297 (12%)
Query: 395 ELLGRGSIGTTYKAVLDN---HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSH-PNLV 450
+++G G+ G KA + + +KR + D + F +E + L H PN++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLGHHPNII 86
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP-----------LHWTSCLKIAE 499
+ + +G + +Y P+G+L + + SR + P L L A
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAP 559
DVA+G+ Y+ + IH NL + N+L+G ++ A++ D+ + +
Sbjct: 147 DVARGMDYLSQKQ-FIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM 205
Query: 560 EIRKSSRRA-TSKSDVYAFGVLLLELLT-GKHP-----SQHPYLAPPDMLEWVRTMRVDD 612
I + T+ SDV+++GVLL E+++ G P Y P + + DD
Sbjct: 206 AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDD 265
Query: 613 GREENRLGMLTEVASVCSLKSPEQRPAMWQVL----KMIQEIKESVMAEDNAAFGYS 665
+ ++ C + P +RP+ Q+L +M++E K V F Y+
Sbjct: 266 --------EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTLYEKFTYA 314
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 24/251 (9%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G G + +N V VK K S +AF + + L H LV + A
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTL---KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +I +Y GSL + + +S + + + +A+G+AYI R ++ IH
Sbjct: 78 TREEPIYIITEYMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IH 133
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++NVL+ ++ D+ + + + APE T KS
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC-FTIKS 192
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDML----EWVRTMRVDDGREENRLGMLTEVAS 627
DV++FG+LL E++T GK P +P D++ + R RV++ +E L ++
Sbjct: 193 DVWSFGILLYEIVTYGKIP--YPGRTNADVMTALSQGYRMPRVENCPDE-----LYDIMK 245
Query: 628 VCSLKSPEQRP 638
+C + E+RP
Sbjct: 246 MCWKEKAEERP 256
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 115/265 (43%), Gaps = 25/265 (9%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G G V VK K S + F Q + + LSHP LV
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMI---KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ ++ +Y NG L N + RS K L + L++ DV +G+A++ + IH
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYL---RS-HGKGLEPSQLLEMCYDVCEGMAFL-ESHQFIH 127
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L + N L+ D +++D+ V + APE+ + +SKS
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYF-KYSSKS 186
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM----LTEVAS 627
DV+AFG+L+ E+ + GK P + +++ ++V G R + + ++
Sbjct: 187 DVWAFGILMWEVFSLGKMP--YDLYTNSEVV-----LKVSQGHRLYRPHLASDTIYQIMY 239
Query: 628 VCSLKSPEQRPAMWQVLKMIQEIKE 652
C + PE+RP Q+L I+ ++E
Sbjct: 240 SCWHELPEKRPTFQQLLSSIEPLRE 264
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 112/277 (40%), Gaps = 37/277 (13%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
+G GS GT YK H V VK +AF + + H N++ Y
Sbjct: 44 IGSGSFGTVYKGKW--HGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
K ++ + SL+ +H ++ + IA AQG+ Y+H A +IH
Sbjct: 102 -TKDNLAIVTQWCEGSSLYKHLH----VQETKFQMFQLIDIARQTAQGMDYLH-AKNIIH 155
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXX-----XXXXXXPDTVAYKAPE-IRKSSRRATS 570
++KS+N+ L ++ D+ +V + APE IR S
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 571 -KSDVYAFGVLLLELLTGKHPSQHPY------------LAPPDMLEWVRTMRVDDGREEN 617
+SDVY++G++L EL+TG+ P H A PD+ + + N
Sbjct: 216 FQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYK----------N 265
Query: 618 RLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESV 654
+ + + C K E+RP Q+L I+ ++ S+
Sbjct: 266 CPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 114/267 (42%), Gaps = 19/267 (7%)
Query: 397 LGRGSIGTTYKA--VLDNHLIVTVKRFDANKTADTSA----EAFEQHMEAVGGLSHPNLV 450
+G+G G +K V D ++ + +T + F++ + + L+HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ Y ++ ++ P G L++ + +A P+ W+ L++ D+A G+ Y+
Sbjct: 87 --KLYGLMHNPPRMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 511 ASW-LIHGNLKSSNVLL-----GADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPE-IRK 563
+ ++H +L+S N+ L A A++ D+ + APE I
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGA 200
Query: 564 SSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLT 623
T K+D Y+F ++L +LTG+ P + +R + E+ L
Sbjct: 201 EEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLR 260
Query: 624 EVASVCSLKSPEQRPAMWQVLKMIQEI 650
V +C P++RP ++K + E+
Sbjct: 261 NVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 114/267 (42%), Gaps = 19/267 (7%)
Query: 397 LGRGSIGTTYKA--VLDNHLIVTVKRFDANKTADTSA----EAFEQHMEAVGGLSHPNLV 450
+G+G G +K V D ++ + +T + F++ + + L+HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ Y ++ ++ P G L++ + +A P+ W+ L++ D+A G+ Y+
Sbjct: 87 --KLYGLMHNPPRMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 511 ASW-LIHGNLKSSNVLL-----GADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPE-IRK 563
+ ++H +L+S N+ L A A++ D+ + APE I
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGA 200
Query: 564 SSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLT 623
T K+D Y+F ++L +LTG+ P + +R + E+ L
Sbjct: 201 EEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLR 260
Query: 624 EVASVCSLKSPEQRPAMWQVLKMIQEI 650
V +C P++RP ++K + E+
Sbjct: 261 NVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 114/267 (42%), Gaps = 19/267 (7%)
Query: 397 LGRGSIGTTYKA--VLDNHLIVTVKRFDANKTADTSA----EAFEQHMEAVGGLSHPNLV 450
+G+G G +K V D ++ + +T + F++ + + L+HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ Y ++ ++ P G L++ + +A P+ W+ L++ D+A G+ Y+
Sbjct: 87 --KLYGLMHNPPRMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 511 ASW-LIHGNLKSSNVLL-----GADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPE-IRK 563
+ ++H +L+S N+ L A A++ D+ + APE I
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGA 200
Query: 564 SSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLT 623
T K+D Y+F ++L +LTG+ P + +R + E+ L
Sbjct: 201 EEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLR 260
Query: 624 EVASVCSLKSPEQRPAMWQVLKMIQEI 650
V +C P++RP ++K + E+
Sbjct: 261 NVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 385 SLEQLMRASAELLGRGSIGTT--YKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVG 442
S+E+ +R + +G GS G K+ D V +K + ++ + E + + +
Sbjct: 22 SMEKYVRL--QKIGEGSFGKAILVKSTEDGRQYV-IKEINISRMSSKEREESRREVAVLA 78
Query: 443 GLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSI---RAKPLHWTSCLKIAE 499
+ HPN+V R F+ G ++ DY G LF I+ + + + L W + +A
Sbjct: 79 NMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA- 137
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---Y 556
L ++H ++H ++KS N+ L D +L D+ + Y
Sbjct: 138 -----LKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYY 191
Query: 557 KAPEIRKSSRRATSKSDVYAFGVLLLELLTGKH 589
+PEI + ++ +KSD++A G +L EL T KH
Sbjct: 192 LSPEICE-NKPYNNKSDIWALGCVLYELCTLKH 223
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 125/297 (42%), Gaps = 36/297 (12%)
Query: 395 ELLGRGSIGTTYKAVLDN---HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSH-PNLV 450
+++G G+ G KA + + +KR + D + F +E + L H PN++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLGHHPNII 79
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP-----------LHWTSCLKIAE 499
+ + +G + +Y P+G+L + + SR + P L L A
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAP 559
DVA+G+ Y+ + IH +L + N+L+G ++ A++ D+ + +
Sbjct: 140 DVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM 198
Query: 560 EIRKSSRRA-TSKSDVYAFGVLLLELLT-GKHP-----SQHPYLAPPDMLEWVRTMRVDD 612
I + T+ SDV+++GVLL E+++ G P Y P + + DD
Sbjct: 199 AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDD 258
Query: 613 GREENRLGMLTEVASVCSLKSPEQRPAMWQVL----KMIQEIKESVMAEDNAAFGYS 665
+ ++ C + P +RP+ Q+L +M++E K V F Y+
Sbjct: 259 E--------VYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTLYEKFTYA 307
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 125/297 (42%), Gaps = 36/297 (12%)
Query: 395 ELLGRGSIGTTYKAVLDN---HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSH-PNLV 450
+++G G+ G KA + + +KR + D + F +E + L H PN++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLGHHPNII 89
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP-----------LHWTSCLKIAE 499
+ + +G + +Y P+G+L + + SR + P L L A
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAP 559
DVA+G+ Y+ + IH +L + N+L+G ++ A++ D+ + +
Sbjct: 150 DVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM 208
Query: 560 EIRKSSRRA-TSKSDVYAFGVLLLELLT-GKHP-----SQHPYLAPPDMLEWVRTMRVDD 612
I + T+ SDV+++GVLL E+++ G P Y P + + DD
Sbjct: 209 AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDD 268
Query: 613 GREENRLGMLTEVASVCSLKSPEQRPAMWQVL----KMIQEIKESVMAEDNAAFGYS 665
+ ++ C + P +RP+ Q+L +M++E K V F Y+
Sbjct: 269 --------EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTLYEKFTYA 317
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 114/249 (45%), Gaps = 26/249 (10%)
Query: 416 VTVKRFDANKTA------DTSAEAFEQHMEAVGGLSHPNLVPIRAYF-QAKGERLVIYDY 468
V + + NK A D +A+AF + L H NLV + + KG ++ +Y
Sbjct: 37 VMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96
Query: 469 QPNGSLFNLIHGSRSIRAKPLHWTSCL-KIAEDVAQGLAYIHRASWLIHGNLKSSNVLLG 527
GSL + + R + + CL K + DV + + Y+ + +H +L + NVL+
Sbjct: 97 MAKGSLVDYLRS----RGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVS 151
Query: 528 ADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT- 586
D A+++D+ V + APE + ++ ++KSDV++FG+LL E+ +
Sbjct: 152 EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSF 210
Query: 587 GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLG----MLTEVASVCSLKSPEQRPAMWQ 642
G+ P +P + D++ RV+ G + + + EV C RP+ Q
Sbjct: 211 GRVP--YPRIPLKDVVP-----RVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQ 263
Query: 643 VLKMIQEIK 651
+ + ++ IK
Sbjct: 264 LREQLEHIK 272
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 118/268 (44%), Gaps = 37/268 (13%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTA------DTSAEAFEQHMEAVGGLSHPNLV 450
+G+G G V + + NK A D +A+AF + L H NLV
Sbjct: 14 IGKGEFGD-----------VMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLV 62
Query: 451 PIRAYF-QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCL-KIAEDVAQGLAYI 508
+ + KG ++ +Y GSL + + R + + CL K + DV + + Y+
Sbjct: 63 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS----RGRSVLGGDCLLKFSLDVCEAMEYL 118
Query: 509 HRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIRKSSRRA 568
+ +H +L + NVL+ D A+++D+ V + APE + + +
Sbjct: 119 EGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFS 177
Query: 569 TSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLG----MLT 623
T KSDV++FG+LL E+ + G+ P +P + D++ RV+ G + + +
Sbjct: 178 T-KSDVWSFGILLWEIYSFGRVP--YPRIPLKDVVP-----RVEKGYKMDAPDGCPPAVY 229
Query: 624 EVASVCSLKSPEQRPAMWQVLKMIQEIK 651
EV C RP+ Q+ + ++ IK
Sbjct: 230 EVMKNCWHLDAAMRPSFLQLREQLEHIK 257
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 24/251 (9%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G G + +N V VK K S +AF + + L H LV + A
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTL---KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +I ++ GSL + + +S + + + +A+G+AYI R ++ IH
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IH 132
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L+++NVL+ ++ D+ + + + APE T KS
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC-FTIKS 191
Query: 573 DVYAFGVLLLELLT-GKHPSQHPYLAPPDML----EWVRTMRVDDGREENRLGMLTEVAS 627
+V++FG+LL E++T GK P +P D++ + R R+++ +E L ++
Sbjct: 192 NVWSFGILLYEIVTYGKIP--YPGRTNADVMSALSQGYRMPRMENCPDE-----LYDIMK 244
Query: 628 VCSLKSPEQRP 638
+C + E+RP
Sbjct: 245 MCWKEKAEERP 255
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 112/248 (45%), Gaps = 24/248 (9%)
Query: 416 VTVKRFDANKTA------DTSAEAFEQHMEAVGGLSHPNLVPIRAYF-QAKGERLVIYDY 468
V + + NK A D +A+AF + L H NLV + + KG ++ +Y
Sbjct: 28 VMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 87
Query: 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA 528
GSL + + RS L LK + DV + + Y+ + +H +L + NVL+
Sbjct: 88 MAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSE 143
Query: 529 DFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-G 587
D A+++D+ V + APE + + +T KSDV++FG+LL E+ + G
Sbjct: 144 DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFST-KSDVWSFGILLWEIYSFG 202
Query: 588 KHPSQHPYLAPPDMLEWVRTMRVDDGREENRLG----MLTEVASVCSLKSPEQRPAMWQV 643
+ P +P + D++ RV+ G + + + EV C RP+ Q+
Sbjct: 203 RVP--YPRIPLKDVVP-----RVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL 255
Query: 644 LKMIQEIK 651
+ ++ IK
Sbjct: 256 REQLEHIK 263
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 120/288 (41%), Gaps = 39/288 (13%)
Query: 397 LGRGSIGTTYKAVLDNHL------IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+G G+ G ++A L +V VK +AD A+ F++ + +PN+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD-FQREAALMAEFDNPNIV 113
Query: 451 PIRAYFQAKGERLVIYDYQPNGSL------------FNLIHGSRSIRAK-------PLHW 491
+ ++++Y G L +L H S RA+ PL
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 492 TSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP 551
L IA VA G+AY+ + +H +L + N L+G + ++ D+
Sbjct: 174 AEQLCIARQVAAGMAYLSERKF-VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA 232
Query: 552 DT-----VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEW 604
D + + PE R T++SDV+A+GV+L E+ + PY +A +++ +
Sbjct: 233 DGNDAIPIRWMPPE-SIFYNRYTTESDVWAYGVVLWEIFSY---GLQPYYGMAHEEVIYY 288
Query: 605 VRTMRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKE 652
VR + E L L + +C K P RP+ + +++Q + E
Sbjct: 289 VRDGNILACPENCPLE-LYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 18/256 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNHL--IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPI 452
E +G+GS G +K + DN +V +K D + D + +Q + + P +
Sbjct: 33 EKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYVTKY 90
Query: 453 RAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
+ + +I +Y GS +L+ PL T I ++ +GL Y+H
Sbjct: 91 YGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILREILKGLDYLHSEK 144
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRAT 569
IH ++K++NVLL E +L D+ V + APE+ K S
Sbjct: 145 -KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY-D 202
Query: 570 SKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629
SK+D+++ G+ +EL G+ P H L P +L ++ E N L E C
Sbjct: 203 SKADIWSLGITAIELARGEPP--HSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVEAC 259
Query: 630 SLKSPEQRPAMWQVLK 645
K P RP ++LK
Sbjct: 260 LNKEPSFRPTAKELLK 275
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 37/250 (14%)
Query: 350 TKANKVQVEEMAIGSQTLIKRSGSLVFCAGESEVYSLEQLMRASAELLGRGSIGTTYKAV 409
T+ K +V E + +Q RSG ++L + +G+G G
Sbjct: 165 TRLIKPKVMEGTVAAQDEFYRSG-----------WALNMKELKLLQTIGKGEFGD----- 208
Query: 410 LDNHLIVTVKRFDANKTA------DTSAEAFEQHMEAVGGLSHPNLVPIRAYF-QAKGER 462
V + + NK A D +A+AF + L H NLV + + KG
Sbjct: 209 ------VMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 262
Query: 463 LVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCL-KIAEDVAQGLAYIHRASWLIHGNLKS 521
++ +Y GSL + + R + + CL K + DV + + Y+ + +H +L +
Sbjct: 263 YIVTEYMAKGSLVDYLRS----RGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAA 317
Query: 522 SNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLL 581
NVL+ D A+++D+ V + APE + + +T KSDV++FG+LL
Sbjct: 318 RNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST-KSDVWSFGILL 376
Query: 582 LELLT-GKHP 590
E+ + G+ P
Sbjct: 377 WEIYSFGRVP 386
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 18/256 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNHL--IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPI 452
E +G+GS G +K + DN +V +K D + E +Q + + P +
Sbjct: 28 EKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKY 85
Query: 453 RAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
+ + +I +Y GS +L+ PL T I ++ +GL Y+H
Sbjct: 86 YGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDYLHSEK 139
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRAT 569
IH ++K++NVLL E +L D+ V + APE+ K S
Sbjct: 140 -KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY-D 197
Query: 570 SKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629
SK+D+++ G+ +EL G+ P H L P +L ++ E N L E C
Sbjct: 198 SKADIWSLGITAIELARGEPP--HSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVEAC 254
Query: 630 SLKSPEQRPAMWQVLK 645
K P RP ++LK
Sbjct: 255 LNKEPSFRPTAKELLK 270
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 18/256 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNHL--IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPI 452
E +G+GS G +K + DN +V +K D + D + +Q + + P +
Sbjct: 13 EKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYVTKY 70
Query: 453 RAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
+ + +I +Y GS +L+ PL T I ++ +GL Y+H
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDYLHSEK 124
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRAT 569
IH ++K++NVLL E +L D+ V + APE+ K S
Sbjct: 125 -KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY-D 182
Query: 570 SKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629
SK+D+++ G+ +EL G+ P H L P +L ++ E N L E C
Sbjct: 183 SKADIWSLGITAIELARGEPP--HSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVEAC 239
Query: 630 SLKSPEQRPAMWQVLK 645
K P RP ++LK
Sbjct: 240 LNKEPSFRPTAKELLK 255
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 18/256 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNHL--IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPI 452
E +G+GS G +K + DN +V +K D + D + +Q + + P +
Sbjct: 13 EKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYVTKY 70
Query: 453 RAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
+ + +I +Y GS +L+ PL T I ++ +GL Y+H
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDYLHSEK 124
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRAT 569
IH ++K++NVLL E +L D+ V + APE+ K S
Sbjct: 125 -KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY-D 182
Query: 570 SKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629
SK+D+++ G+ +EL G+ P H L P +L ++ E N L E C
Sbjct: 183 SKADIWSLGITAIELARGEPP--HSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVEAC 239
Query: 630 SLKSPEQRPAMWQVLK 645
K P RP ++LK
Sbjct: 240 LNKEPSFRPTAKELLK 255
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 13/198 (6%)
Query: 395 ELLGRGSIGTTYKAVLDN-HLIVTVKRFDA---NKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G T YKA N + IV +K+ ++ D + ++ + LSHPN++
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ F K +++D+ +I S+ P H + + + QGL Y+H+
Sbjct: 76 GLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLM---TLQGLEYLHQ 130
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRR 567
W++H +LK +N+LL + +L D+ V Y+APE+ +R
Sbjct: 131 -HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARM 189
Query: 568 ATSKSDVYAFGVLLLELL 585
D++A G +L ELL
Sbjct: 190 YGVGVDMWAVGCILAELL 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 36/263 (13%)
Query: 397 LGRGSIGTTYKAVLDNHL--IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
+G+GS G YK + DNH +V +K D + D + +Q + + P +
Sbjct: 27 IGKGSFGEVYKGI-DNHTKEVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYITRYFG 84
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
+ + +I +Y GS +L ++ PL T I ++ +GL Y+H +
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDL------LKPGPLEETYIATILREILKGLDYLH-SERK 137
Query: 515 IHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATSK 571
IH ++K++NVLL + +L D+ V + APE+ K S K
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS-AYDFK 196
Query: 572 SDVYAFGVLLLELLTGK------HPSQHPYLAP---PDMLEWVRTMRVDDGREENRLGML 622
+D+++ G+ +EL G+ HP + +L P P LE G+
Sbjct: 197 ADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLE---------GQHSKP---F 244
Query: 623 TEVASVCSLKSPEQRPAMWQVLK 645
E C K P RP ++LK
Sbjct: 245 KEFVEACLNKDPRFRPTAKELLK 267
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 397 LGRGSIGTT----YKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + + FE+ +E + L H N+V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 452 IRAYFQAKGER--LVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + G R +I +Y P GSL + + H R K L +TS + +G+ Y
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 130
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYC------XXXXXXXXXXXXPDTVAYKAPEI 561
+ + IH NL + N+L+ + ++ D+ + + APE
Sbjct: 131 LGTKRY-IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
S+ + + SDV++FGV+L EL T S+ P
Sbjct: 190 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSP 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 71
Query: 446 HPNLVPIRAYFQAKGERL-VIY-----DYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ V+Y DY P H SR+ + P+ +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 129
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---- 555
+ + LAYIH + + H ++K N+LL D + C P+
Sbjct: 130 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 556 -YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFE-QHMEAVGGL 444
+++ +++G GS G Y+A L D+ +V +K+ K AF+ + ++ + L
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK-------AFKNRELQIMRKL 70
Query: 445 SHPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIA 498
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY- 129
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-----T 553
+ + LAYIH + + H ++K N+LL D + C P+ +
Sbjct: 130 -QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 554 VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 33/281 (11%)
Query: 395 ELLGRGSIGTTYKA-VLDN---HLIVTVKRFDANKTADTS-AEAFEQHMEAVGGLSHPNL 449
E++GRG G Y +LDN + VK N+ D F + SHPN+
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 450 VPIRAY-FQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + +++G LV+ Y +G L N I + + K L + VA+G+ Y
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 145
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-------VAYKAPE 560
+ + +H +L + N +L F ++ D+ V + A E
Sbjct: 146 LASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE----E 616
+++ T+KSDV++FGVLL EL+T P PY PD+ + T+ + GR E
Sbjct: 205 -SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PY---PDVNTFDITVYLLQGRRLLQPE 257
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657
L EV C E RP+ +++ I I + + E
Sbjct: 258 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 298
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 33/281 (11%)
Query: 395 ELLGRGSIGTTYKA-VLDN---HLIVTVKRFDANKTADTS-AEAFEQHMEAVGGLSHPNL 449
E++GRG G Y +LDN + VK N+ D F + SHPN+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 450 VPIRAY-FQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + +++G LV+ Y +G L N I + + K L + VA+G+ Y
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 146
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-------VAYKAPE 560
+ + +H +L + N +L F ++ D+ V + A E
Sbjct: 147 LASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE----E 616
+++ T+KSDV++FGVLL EL+T P PY PD+ + T+ + GR E
Sbjct: 206 -SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PY---PDVNTFDITVYLLQGRRLLQPE 258
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657
L EV C E RP+ +++ I I + + E
Sbjct: 259 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 299
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 33/281 (11%)
Query: 395 ELLGRGSIGTTYKA-VLDN---HLIVTVKRFDANKTADTS-AEAFEQHMEAVGGLSHPNL 449
E++GRG G Y +LDN + VK N+ D F + SHPN+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 450 VPIRAY-FQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + +++G LV+ Y +G L N I + + K L + VA+G+ Y
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 147
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-------VAYKAPE 560
+ + +H +L + N +L F ++ D+ V + A E
Sbjct: 148 LASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE----E 616
+++ T+KSDV++FGVLL EL+T P PY PD+ + T+ + GR E
Sbjct: 207 -SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PY---PDVNTFDITVYLLQGRRLLQPE 259
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657
L EV C E RP+ +++ I I + + E
Sbjct: 260 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 300
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 19 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 72
Query: 446 HPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 73 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 130
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---- 555
+ + LAYIH + + H ++K N+LL D + C P+
Sbjct: 131 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSR 187
Query: 556 -YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 33/281 (11%)
Query: 395 ELLGRGSIGTTYKA-VLDN---HLIVTVKRFDANKTADTS-AEAFEQHMEAVGGLSHPNL 449
E++GRG G Y +LDN + VK N+ D F + SHPN+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 450 VPIRAY-FQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + +++G LV+ Y +G L N I + + K L + VA+G+ Y
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 147
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-------VAYKAPE 560
+ + +H +L + N +L F ++ D+ V + A E
Sbjct: 148 LASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE----E 616
+++ T+KSDV++FGVLL EL+T P PY PD+ + T+ + GR E
Sbjct: 207 -SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PY---PDVNTFDITVYLLQGRRLLQPE 259
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657
L EV C E RP+ +++ I I + + E
Sbjct: 260 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 300
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 71
Query: 446 HPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 129
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---- 555
+ + LAYIH + + H ++K N+LL D + C P+
Sbjct: 130 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 556 -YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 90/222 (40%), Gaps = 42/222 (18%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFD-ANKTADTSAEAFEQHMEAVGGLSHPNLVPI- 452
EL+GRG G YK LD V VK F AN+ + E+++ V + H N+
Sbjct: 19 ELIGRGRYGAVYKGSLDER-PVAVKVFSFANRQNFIN----EKNIYRVPLMEHDNIARFI 73
Query: 453 ----RAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYI 508
R + E L++ +Y PNGSL + S W S ++A V +GLAY+
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS------DWVSSCRLAHSVTRGLAYL 127
Query: 509 HR--------ASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP--------- 551
H + H +L S NVL+ D ++D+ P
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAIS 187
Query: 552 --DTVAYKAPEI------RKSSRRATSKSDVYAFGVLLLELL 585
T+ Y APE+ + A + D+YA G++ E+
Sbjct: 188 EVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 71
Query: 446 HPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 129
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---- 555
+ + LAYIH + + H ++K N+LL D + C P+
Sbjct: 130 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 556 -YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFE-QHMEAVGGL 444
+++ +++G GS G Y+A L D+ +V +K+ K AF+ + ++ + L
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK-------AFKNRELQIMRKL 70
Query: 445 SHPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIA 498
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY- 129
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-----T 553
+ + LAYIH + + H ++K N+LL D + C P+ +
Sbjct: 130 -QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 554 VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 22 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 75
Query: 446 HPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 76 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 133
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---- 555
+ + LAYIH + + H ++K N+LL D + C P+
Sbjct: 134 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSR 190
Query: 556 -YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 33/281 (11%)
Query: 395 ELLGRGSIGTTYKA-VLDN---HLIVTVKRFDANKTADTS-AEAFEQHMEAVGGLSHPNL 449
E++GRG G Y +LDN + VK N+ D F + SHPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 450 VPIRAY-FQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + +++G LV+ Y +G L N I + + K L + VA+G+ Y
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 148
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-------VAYKAPE 560
+ + +H +L + N +L F ++ D+ V + A E
Sbjct: 149 LASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE----E 616
+++ T+KSDV++FGVLL EL+T P PY PD+ + T+ + GR E
Sbjct: 208 -SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PY---PDVNTFDITVYLLQGRRLLQPE 260
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657
L EV C E RP+ +++ I I + + E
Sbjct: 261 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 301
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 30 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 83
Query: 446 HPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 84 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 141
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---- 555
+ + LAYIH + + H ++K N+LL D + C P+
Sbjct: 142 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSR 198
Query: 556 -YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 26 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 79
Query: 446 HPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 80 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 137
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---- 555
+ + LAYIH + + H ++K N+LL D + C P+
Sbjct: 138 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSR 194
Query: 556 -YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 37 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 90
Query: 446 HPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 91 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 148
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---- 555
+ + LAYIH + + H ++K N+LL D + C P+
Sbjct: 149 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSR 205
Query: 556 -YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 33/281 (11%)
Query: 395 ELLGRGSIGTTYKA-VLDN---HLIVTVKRFDANKTADTS-AEAFEQHMEAVGGLSHPNL 449
E++GRG G Y +LDN + VK N+ D F + SHPN+
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 450 VPIRAY-FQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + +++G LV+ Y +G L N I + + K L + VA+G+ Y
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 143
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-------VAYKAPE 560
+ + +H +L + N +L F ++ D+ V + A E
Sbjct: 144 LASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE----E 616
+++ T+KSDV++FGVLL EL+T P PY PD+ + T+ + GR E
Sbjct: 203 -SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PY---PDVNTFDITVYLLQGRRLLQPE 255
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657
L EV C E RP+ +++ I I + + E
Sbjct: 256 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 296
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 33/281 (11%)
Query: 395 ELLGRGSIGTTYKA-VLDN---HLIVTVKRFDANKTADTS-AEAFEQHMEAVGGLSHPNL 449
E++GRG G Y +LDN + VK N+ D F + SHPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 450 VPIRAY-FQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + +++G LV+ Y +G L N I + + K L + VA+G+ Y
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 148
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-------VAYKAPE 560
+ + +H +L + N +L F ++ D+ V + A E
Sbjct: 149 LASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE----E 616
+++ T+KSDV++FGVLL EL+T P PY PD+ + T+ + GR E
Sbjct: 208 -SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PY---PDVNTFDITVYLLQGRRLLQPE 260
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657
L EV C E RP+ +++ I I + + E
Sbjct: 261 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 301
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 71
Query: 446 HPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 129
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-----TV 554
+ + LAYIH + + H ++K N+LL D + C P+ +
Sbjct: 130 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 555 AYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 30 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 83
Query: 446 HPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 84 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 141
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---- 555
+ + LAYIH + + H ++K N+LL D + C P+
Sbjct: 142 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSR 198
Query: 556 -YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKAVLDN-HLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A N I+ +K F A + +E L HPN++ +
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCHSKK-V 129
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIE-GRMHDEKVD 188
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 189 LWSLGVLCYEFLVGKPP 205
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 35/216 (16%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E+ RG G +KA L N V VK F D + E+ + + G+ H NL+ A
Sbjct: 21 EIKARGRFGCVWKAQLMNDF-VAVKIFPLQ---DKQSWQSEREIFSTPGMKHENLLQFIA 76
Query: 455 YFQAKGERL-----VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
+ +G L +I + GSL + + G+ + W +AE +++GL+Y+H
Sbjct: 77 A-EKRGSNLEVELWLITAFHDKGSLTDYLKGN------IITWNELCHVAETMSRGLSYLH 129
Query: 510 R-ASW---------LIHGNLKSSNVLLGADFEARLTDYCXXXXXX-----XXXXXXPDTV 554
W + H + KS NVLL +D A L D+ T
Sbjct: 130 EDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTR 189
Query: 555 AYKAPEIRKSS----RRATSKSDVYAFGVLLLELLT 586
Y APE+ + + R A + D+YA G++L EL++
Sbjct: 190 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 31 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 84
Query: 446 HPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 85 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 142
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-----TV 554
+ + LAYIH + + H ++K N+LL D + C P+ +
Sbjct: 143 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSR 199
Query: 555 AYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 200 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFE-QHMEAVGGL 444
+++ +++G GS G Y+A L D+ +V +K+ K AF+ + ++ + L
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK-------AFKNRELQIMRKL 70
Query: 445 SHPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIA 498
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMY- 129
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--- 555
+ + LAYIH + + H ++K N+LL D + C P+
Sbjct: 130 -QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 556 --YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 397 LGRGSIGTT----YKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + + FE+ +E + L H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 452 IRAYFQAKGER--LVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + G R +I +Y P GSL + + H R K L +TS + +G+ Y
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTS------QICKGMEY 132
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYC------XXXXXXXXXXXXPDTVAYKAPEI 561
+ + IH +L + N+L+ + ++ D+ + + APE
Sbjct: 133 LGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
S+ + + SDV++FGV+L EL T S+ P
Sbjct: 192 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSP 223
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 105
Query: 446 HPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 163
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---- 555
+ + LAYIH + + H ++K N+LL D + C P+
Sbjct: 164 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSR 220
Query: 556 -YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 35/265 (13%)
Query: 395 ELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG GS G+ YKA+ + IV +K+ ++ + + + + P++V
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQV----PVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
+ + ++ +Y GS+ ++I +R K L I + +GL Y+H
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSDIIR----LRNKTLTEDEIATILQSTLKGLEYLHFMR- 145
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATS 570
IH ++K+ N+LL + A+L D+ + + APE+ +
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIG-YNC 204
Query: 571 KSDVYAFGVLLLELLTGKHP--SQHPYLA--------PPDMLEWVRTMRVDDGREENRLG 620
+D+++ G+ +E+ GK P HP A PP T R + +N
Sbjct: 205 VADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPP-------TFRKPELWSDN--- 254
Query: 621 MLTEVASVCSLKSPEQRPAMWQVLK 645
T+ C +KSPEQR Q+L+
Sbjct: 255 -FTDFVKQCLVKSPEQRATATQLLQ 278
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 46 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLD 99
Query: 446 HPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 100 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 157
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-----TV 554
+ + LAYIH + + H ++K N+LL D + C P+ +
Sbjct: 158 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSR 214
Query: 555 AYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 215 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 54 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 107
Query: 446 HPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 108 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 165
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-----TV 554
+ + LAYIH + + H ++K N+LL D + C P+ +
Sbjct: 166 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSR 222
Query: 555 AYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 223 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 80/190 (42%), Gaps = 13/190 (6%)
Query: 34 PSDAVSLLSFKSKADSENKLLYALNERFDYCQ--WQGVKCAQG----RVVRFVLQSFGLR 87
P D +LL K + L L D C W GV C RV L L
Sbjct: 5 PQDKQALLQIKKDLGNPTTLSSWL-PTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLP 63
Query: 88 GTFP-PNTLTRLDQLRVLSLHN-NSLTGPIPDXXXXXXXXXXX-XXRNFFSGAFPLSILS 144
+P P++L L L L + N+L GPIP SGA P +
Sbjct: 64 KPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQ 123
Query: 145 LHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVF---NVSG 201
+ L LD SYN L+G +P ++++L L + + NR SG +P F +F +S
Sbjct: 124 IKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISR 183
Query: 202 NNLTGQVPET 211
N LTG++P T
Sbjct: 184 NRLTGKIPPT 193
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 86 LRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDXXXXXXX--XXXXXXRNFFSGAFPLSIL 143
L GT PP +++ L L ++ N ++G IPD RN +G P +
Sbjct: 137 LSGTLPP-SISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFA 195
Query: 144 SLHRLTILDLSYNNLTGLIPV---------------NLTALD--------RLYSLKLEWN 180
+L+ L +DLS N L G V N A D L L L N
Sbjct: 196 NLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNN 254
Query: 181 RFSGTVPP-LNQ-PFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNPNLCG 230
R GT+P L Q FL NVS NNL G++P+ L +FD S+++ N LCG
Sbjct: 255 RIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLD 105
Query: 446 HPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 163
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-----TV 554
+ + LAYIH + + H ++K N+LL D + C P+ +
Sbjct: 164 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSR 220
Query: 555 AYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 23 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLD 76
Query: 446 HPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 77 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 134
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-----TV 554
+ + LAYIH + + H ++K N+LL D + C P+ +
Sbjct: 135 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSR 191
Query: 555 AYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 192 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 56 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLD 109
Query: 446 HPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 110 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 167
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-----TV 554
+ + LAYIH + + H ++K N+LL D + C P+ +
Sbjct: 168 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSR 224
Query: 555 AYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 225 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 397 LGRGSIGTT----YKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + + FE+ +E + L H N+V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 452 IRAYFQAKGER--LVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + G R +I +Y P GSL + + H R K L +TS + +G+ Y
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 133
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYC------XXXXXXXXXXXXPDTVAYKAPEI 561
+ + IH +L + N+L+ + ++ D+ + + APE
Sbjct: 134 LGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
S+ + + SDV++FGV+L EL T S+ P
Sbjct: 193 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSP 224
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 387 EQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS 445
+++ +++G GS G Y+A L D+ +V +K+ +K + ++ + L
Sbjct: 97 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLD 150
Query: 446 HPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAE 499
H N+V +R +F + GE+ ++ DY P H SR+ + P+ +
Sbjct: 151 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-- 208
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-----TV 554
+ + LAYIH + + H ++K N+LL D + C P+ +
Sbjct: 209 QLFRSLAYIH-SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSR 265
Query: 555 AYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y+APE+ + TS DV++ G +L ELL G+
Sbjct: 266 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 397 LGRGSIGTT----YKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + + FE+ +E + L H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 452 IRAYFQAKGER--LVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + G R +I +Y P GSL + + H R K L +TS + +G+ Y
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 129
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYC------XXXXXXXXXXXXPDTVAYKAPEI 561
+ + IH +L + N+L+ + ++ D+ + + APE
Sbjct: 130 LGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
S+ + + SDV++FGV+L EL T S+ P
Sbjct: 189 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSP 220
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 21/255 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + ++ L +A ++ + Y+ + + I
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN-FI 134
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ P + + APE + + + K
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE-SLAYNKFSIK 193
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 194 SDVWAFGVLLWEIAT---YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 248
Query: 629 CSLKSPEQRPAMWQV 643
C +P RP+ ++
Sbjct: 249 CWQWNPSDRPSFAEI 263
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 397 LGRGSIGTT----YKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + + FE+ +E + L H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 452 IRAYFQAKGER--LVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + G R +I +Y P GSL + + H R K L +TS + +G+ Y
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 132
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYC------XXXXXXXXXXXXPDTVAYKAPEI 561
+ + IH +L + N+L+ + ++ D+ + + APE
Sbjct: 133 LGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
S+ + + SDV++FGV+L EL T S+ P
Sbjct: 192 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSP 223
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 397 LGRGSIGTT----YKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + + FE+ +E + L H N+V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 452 IRAYFQAKGER--LVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + G R +I +Y P GSL + + H R K L +TS + +G+ Y
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 128
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYC------XXXXXXXXXXXXPDTVAYKAPEI 561
+ + IH +L + N+L+ + ++ D+ + + APE
Sbjct: 129 LGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
S+ + + SDV++FGV+L EL T S+ P
Sbjct: 188 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSP 219
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 21/255 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + ++ L +A ++ + Y+ + + I
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN-FI 135
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ P + + APE + + + K
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE-SLAYNKFSIK 194
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 195 SDVWAFGVLLWEIAT---YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 249
Query: 629 CSLKSPEQRPAMWQV 643
C +P RP+ ++
Sbjct: 250 CWQWNPSDRPSFAEI 264
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A +H IV +K F + + + +E L HPN++ +
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF + +I +Y P G L+ + S + + I E++A L Y H +
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKSCTFDEQ-----RTATIMEELADALMYCH-GKKV 144
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG E ++ D+ T+ Y PE+ + R K D
Sbjct: 145 IHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIE-GRMHNEKVD 203
Query: 574 VYAFGVLLLELLTGKHP 590
++ GVL ELL G P
Sbjct: 204 LWCIGVLCYELLVGNPP 220
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 397 LGRGSIGTT----YKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + + FE+ +E + L H N+V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 452 IRAYFQAKGER--LVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + G R +I +Y P GSL + + H R K L +TS + +G+ Y
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 127
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYC------XXXXXXXXXXXXPDTVAYKAPEI 561
+ + IH +L + N+L+ + ++ D+ + + APE
Sbjct: 128 LGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
S+ + + SDV++FGV+L EL T S+ P
Sbjct: 187 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSP 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 397 LGRGSIGTT----YKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + + FE+ +E + L H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 452 IRAYFQAKGER--LVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + G R +I +Y P GSL + + H R K L +TS + +G+ Y
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 129
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYC------XXXXXXXXXXXXPDTVAYKAPEI 561
+ + IH +L + N+L+ + ++ D+ + + APE
Sbjct: 130 LGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
S+ + + SDV++FGV+L EL T S+ P
Sbjct: 189 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSP 220
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 397 LGRGSIGTT----YKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + + FE+ +E + L H N+V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 452 IRAYFQAKGER--LVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + G R +I +Y P GSL + + H R K L +TS + +G+ Y
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 160
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYC------XXXXXXXXXXXXPDTVAYKAPEI 561
+ + IH +L + N+L+ + ++ D+ + + APE
Sbjct: 161 LGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
S+ + + SDV++FGV+L EL T S+ P
Sbjct: 220 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSP 251
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 397 LGRGSIGTT----YKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + + FE+ +E + L H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 452 IRAYFQAKGER--LVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + G R +I +Y P GSL + + H R K L +TS + +G+ Y
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 147
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYC------XXXXXXXXXXXXPDTVAYKAPEI 561
+ + IH +L + N+L+ + ++ D+ + + APE
Sbjct: 148 LGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
S+ + + SDV++FGV+L EL T S+ P
Sbjct: 207 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSP 238
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 397 LGRGSIGTT----YKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + + FE+ +E + L H N+V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 452 IRAYFQAKGER--LVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + G R +I +Y P GSL + + H R K L +TS + +G+ Y
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 134
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYC------XXXXXXXXXXXXPDTVAYKAPEI 561
+ + IH +L + N+L+ + ++ D+ + + APE
Sbjct: 135 LGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
S+ + + SDV++FGV+L EL T S+ P
Sbjct: 194 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSP 225
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 10/195 (5%)
Query: 397 LGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
+G GS G +K D IV +K+F ++ + + + + L HPNLV +
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
F+ K ++++Y + L L R R P H I Q + + H+ + I
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHEL---DRYQRGVPEHLVK--SITWQTLQAVNFCHKHN-CI 124
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATSKS 572
H ++K N+L+ +L D+ D VA Y++PE+ +
Sbjct: 125 HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPV 184
Query: 573 DVYAFGVLLLELLTG 587
DV+A G + ELL+G
Sbjct: 185 DVWAIGCVFAELLSG 199
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 397 LGRGSIGTT----YKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + + FE+ +E + L H N+V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 452 IRAYFQAKGER--LVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + G R +I +Y P GSL + + H R K L +TS + +G+ Y
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 136
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYC------XXXXXXXXXXXXPDTVAYKAPEI 561
+ + IH +L + N+L+ + ++ D+ + + APE
Sbjct: 137 LGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
S+ + + SDV++FGV+L EL T S+ P
Sbjct: 196 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSP 227
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 397 LGRGSIGTT----YKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + + FE+ +E + L H N+V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 452 IRAYFQAKGER--LVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + G R +I +Y P GSL + + H R K L +TS + +G+ Y
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 135
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYC------XXXXXXXXXXXXPDTVAYKAPEI 561
+ + IH +L + N+L+ + ++ D+ + + APE
Sbjct: 136 LGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
S+ + + SDV++FGV+L EL T S+ P
Sbjct: 195 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSP 226
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G ++ + + + I E +A L+Y H + +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 134
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIE-GRMHDEKVD 193
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 194 LWSLGVLCYEFLVGKPP 210
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 447 PNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLA 506
P +V F + GE + ++ GSL ++ ++ I + L K++ V +GLA
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-----KVSIAVLRGLA 128
Query: 507 YIHRASWLIHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSS 565
Y+ ++H ++K SN+L+ + E +L D+ T +Y APE R
Sbjct: 129 YLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPE-RLQG 187
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDM--LEWVRTMRVDDGRE 615
+ +SD+++ G+ L+EL G++P + PPD LE + V DG E
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYP-----IPPPDAKELEAIFGRPVVDGEE 234
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLH-WTSCLKIAEDVA 502
++HP +V + FQ +G+ +I D+ G LF + + + + + L +A D
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAP 559
L I+R +LK N+LL + +LTD+ TV Y AP
Sbjct: 143 HSLGIIYR-------DLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAP 195
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQ 592
E+ + R T +D ++FGVL+ E+LTG P Q
Sbjct: 196 EV-VNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 33/281 (11%)
Query: 395 ELLGRGSIGTTYKA-VLDN---HLIVTVKRFDANKTADTS-AEAFEQHMEAVGGLSHPNL 449
E++GRG G Y +LDN + VK N+ D F + SHPN+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 450 VPIRAY-FQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + +++G LV+ Y +G L N I + + K L + VA+G+ +
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKF 149
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-------VAYKAPE 560
+ + +H +L + N +L F ++ D+ V + A E
Sbjct: 150 LASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE----E 616
+++ T+KSDV++FGVLL EL+T P PY PD+ + T+ + GR E
Sbjct: 209 -SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PY---PDVNTFDITVYLLQGRRLLQPE 261
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657
L EV C E RP+ +++ I I + + E
Sbjct: 262 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 302
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLH-WTSCLKIAEDVA 502
++HP +V + FQ +G+ +I D+ G LF + + + + + L +A D
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAP 559
L I+R +LK N+LL + +LTD+ TV Y AP
Sbjct: 143 HSLGIIYR-------DLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAP 195
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQ 592
E+ + R T +D ++FGVL+ E+LTG P Q
Sbjct: 196 EV-VNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 29/207 (14%)
Query: 397 LGRGSIGTTYKAVLDNHLI----VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPI 452
+G+G+ K L H++ V VK D + +S + + + + L+HPN+V +
Sbjct: 15 IGKGNFA---KVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 71
Query: 453 RAYFQAKGERLVIYDYQPNGSLFNLI--HG---SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + ++ +Y G +F+ + HG + RAK + + Y
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAK----------FRQIVSAVQY 121
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA----YKAPEIRK 563
H+ +++H +LK+ N+LL AD ++ D+ DT Y APE+ +
Sbjct: 122 CHQ-KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL--DTFCGSPPYAAPELFQ 178
Query: 564 SSRRATSKSDVYAFGVLLLELLTGKHP 590
+ + DV++ GV+L L++G P
Sbjct: 179 GKKYDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLH-WTSCLKIAEDVA 502
++HP +V + FQ +G+ +I D+ G LF + + + + + L +A D
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 143
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAP 559
L I+R +LK N+LL + +LTD+ TV Y AP
Sbjct: 144 HSLGIIYR-------DLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAP 196
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQ 592
E+ + R T +D ++FGVL+ E+LTG P Q
Sbjct: 197 EV-VNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G ++ + + + I E +A L+Y H + +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 134
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIE-GRMHDEKVD 193
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 194 LWSLGVLCYEFLVGKPP 210
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 397 LGRGSIGTT----YKAVLDN-HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + + FE+ +E + L H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 452 IRAYFQAKGER--LVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + G R +I +Y P GSL + + H R K L +TS + +G+ Y
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 147
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYC------XXXXXXXXXXXXPDTVAYKAPEI 561
+ + IH +L + N+L+ + ++ D+ + + APE
Sbjct: 148 LGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
S+ + + SDV++FGV+L EL T S+ P
Sbjct: 207 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSP 238
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 116/274 (42%), Gaps = 33/274 (12%)
Query: 395 ELLGRGSIGTTYKA-VLDN---HLIVTVKRFDANKTADTS-AEAFEQHMEAVGGLSHPNL 449
E++GRG G Y +LDN + VK N+ D F + SHPN+
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 450 VPIRAY-FQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + +++G LV+ Y +G L N I + + K L + VA+G+ Y
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 140
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-------VAYKAPE 560
+ + +H +L + N +L F ++ D+ V + A E
Sbjct: 141 LASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE----E 616
+++ T+KSDV++FGVLL EL+T P PY PD+ + T+ + GR E
Sbjct: 200 -SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PY---PDVNTFDITVYLLQGRRLLQPE 252
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650
L EV C E RP+ +++ I I
Sbjct: 253 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 26/225 (11%)
Query: 379 GESEVYSLEQLMRASAELLGRGSIGTTYKAVLDNHLI----VTVKRFDANKTADTSAEAF 434
G S + EQ + LL G K L H++ V VK D + +S +
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLI--HG---SRSIRAKPL 489
+ + + L+HPN+V + + + ++ +Y G +F+ + HG + RAK
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK-- 118
Query: 490 HWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXX 549
+ + Y H+ +++H +LK+ N+LL AD ++ D+
Sbjct: 119 --------FRQIVSAVQYCHQ-KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL 169
Query: 550 XPDTVA----YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
DT Y APE+ + + + DV++ GV+L L++G P
Sbjct: 170 --DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 397 LGRGSIGTT----YKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + + FE+ +E + L H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 452 IRAYFQAKGER--LVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + G R +I +Y P GSL + + H R K L +TS + +G+ Y
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 129
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYC------XXXXXXXXXXXXPDTVAYKAPEI 561
+ + IH +L + N+L+ + ++ D+ + + APE
Sbjct: 130 LGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
S+ + + SDV++FGV+L EL T S+ P
Sbjct: 189 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSP 220
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 33/281 (11%)
Query: 395 ELLGRGSIGTTYKA-VLDN---HLIVTVKRFDANKTADTS-AEAFEQHMEAVGGLSHPNL 449
E++GRG G Y +LDN + VK N+ D F + SHPN+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 450 VPIRAY-FQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + +++G LV+ Y +G L N I + + K L + VA+G+ +
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKF 149
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-------VAYKAPE 560
+ + +H +L + N +L F ++ D+ V + A E
Sbjct: 150 LASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE----E 616
+++ T+KSDV++FGVLL EL+T P PY PD+ + T+ + GR E
Sbjct: 209 -SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PY---PDVNTFDITVYLLQGRRLLQPE 261
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657
L EV C E RP+ +++ I I + + E
Sbjct: 262 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 302
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 116/274 (42%), Gaps = 33/274 (12%)
Query: 395 ELLGRGSIGTTYKA-VLDN---HLIVTVKRFDANKTADTS-AEAFEQHMEAVGGLSHPNL 449
E++GRG G Y +LDN + VK N+ D F + SHPN+
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 450 VPIRAY-FQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + +++G LV+ Y +G L N I + + K L + VA+G+ Y
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 167
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-------VAYKAPE 560
+ + +H +L + N +L F ++ D+ V + A E
Sbjct: 168 LASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE----E 616
+++ T+KSDV++FGVLL EL+T P PY PD+ + T+ + GR E
Sbjct: 227 -SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PY---PDVNTFDITVYLLQGRRLLQPE 279
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650
L EV C E RP+ +++ I I
Sbjct: 280 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 155
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIE-GRMHDEKVD 214
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 215 LWSLGVLCYEFLVGKPP 231
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 33/281 (11%)
Query: 395 ELLGRGSIGTTYKA-VLDN---HLIVTVKRFDANKTADTS-AEAFEQHMEAVGGLSHPNL 449
E++GRG G Y +LDN + VK N+ D F + SHPN+
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 450 VPIRAY-FQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + +++G LV+ Y +G L N I + + K L + VA+G+ +
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKF 153
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-------VAYKAPE 560
+ + +H +L + N +L F ++ D+ V + A E
Sbjct: 154 LASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE----E 616
+++ T+KSDV++FGVLL EL+T P PY PD+ + T+ + GR E
Sbjct: 213 -SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PY---PDVNTFDITVYLLQGRRLLQPE 265
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657
L EV C E RP+ +++ I I + + E
Sbjct: 266 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 306
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 26/225 (11%)
Query: 379 GESEVYSLEQLMRASAELLGRGSIGTTYKAVLDNHLI----VTVKRFDANKTADTSAEAF 434
G S + EQ + LL G K L H++ V VK D + +S +
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLI--HG---SRSIRAKPL 489
+ + + L+HPN+V + + + ++ +Y G +F+ + HG + RAK
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK-- 118
Query: 490 HWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXX 549
+ + Y H+ +++H +LK+ N+LL AD ++ D+
Sbjct: 119 --------FRQIVSAVQYCHQ-KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL 169
Query: 550 XPDTVA----YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
DT Y APE+ + + + DV++ GV+L L++G P
Sbjct: 170 --DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 33/281 (11%)
Query: 395 ELLGRGSIGTTYKA-VLDN---HLIVTVKRFDANKTADTS-AEAFEQHMEAVGGLSHPNL 449
E++GRG G Y +LDN + VK N+ D F + SHPN+
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 450 VPIRAY-FQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + +++G LV+ Y +G L N I + + K L + VA+G+ +
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKF 207
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTD-------YCXXXXXXXXXXXXPDTVAYKAPE 560
+ + +H +L + N +L F ++ D Y V + A E
Sbjct: 208 LASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE----E 616
+++ T+KSDV++FGVLL EL+T P PY PD+ + T+ + GR E
Sbjct: 267 -SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PY---PDVNTFDITVYLLQGRRLLQPE 319
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657
L EV C E RP+ +++ I I + + E
Sbjct: 320 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 116/274 (42%), Gaps = 33/274 (12%)
Query: 395 ELLGRGSIGTTYKA-VLDN---HLIVTVKRFDANKTADTS-AEAFEQHMEAVGGLSHPNL 449
E++GRG G Y +LDN + VK N+ D F + SHPN+
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 450 VPIRAY-FQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + +++G LV+ Y +G L N I + + K L + VA+G+ Y
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 166
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-------VAYKAPE 560
+ + +H +L + N +L F ++ D+ V + A E
Sbjct: 167 LASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE----E 616
+++ T+KSDV++FGVLL EL+T P PY PD+ + T+ + GR E
Sbjct: 226 -SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PY---PDVNTFDITVYLLQGRRLLQPE 278
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650
L EV C E RP+ +++ I I
Sbjct: 279 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 33/281 (11%)
Query: 395 ELLGRGSIGTTYKA-VLDN---HLIVTVKRFDANKTADTS-AEAFEQHMEAVGGLSHPNL 449
E++GRG G Y +LDN + VK N+ D F + SHPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 450 VPIRAY-FQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + +++G LV+ Y +G L N I + + K L + VA+G+ +
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKF 148
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-------VAYKAPE 560
+ + +H +L + N +L F ++ D+ V + A E
Sbjct: 149 LASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE----E 616
+++ T+KSDV++FGVLL EL+T P PY PD+ + T+ + GR E
Sbjct: 208 -SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PY---PDVNTFDITVYLLQGRRLLQPE 260
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657
L EV C E RP+ +++ I I + + E
Sbjct: 261 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 301
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 155
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIE-GRMHDEKVD 214
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 215 LWSLGVLCYEFLVGKPP 231
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 106/252 (42%), Gaps = 14/252 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 130
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIE-GRMHDEKVD 189
Query: 574 VYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSLKS 633
+++ GVL E L GK P+ A + R RV+ + ++ S +
Sbjct: 190 LWSLGVLCYEFLVGK----PPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 245
Query: 634 PEQRPAMWQVLK 645
P QRP + +VL+
Sbjct: 246 PSQRPMLREVLE 257
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 33/281 (11%)
Query: 395 ELLGRGSIGTTYKA-VLDN---HLIVTVKRFDANKTADTS-AEAFEQHMEAVGGLSHPNL 449
E++GRG G Y +LDN + VK N+ D F + SHPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 450 VPIRAY-FQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + +++G LV+ Y +G L N I + + K L + VA+G+ +
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKF 148
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-------VAYKAPE 560
+ + +H +L + N +L F ++ D+ V + A E
Sbjct: 149 LASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE----E 616
+++ T+KSDV++FGVLL EL+T P PY PD+ + T+ + GR E
Sbjct: 208 -SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PY---PDVNTFDITVYLLQGRRLLQPE 260
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657
L EV C E RP+ +++ I I + + E
Sbjct: 261 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 301
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 33/281 (11%)
Query: 395 ELLGRGSIGTTYKA-VLDN---HLIVTVKRFDANKTADTS-AEAFEQHMEAVGGLSHPNL 449
E++GRG G Y +LDN + VK N+ D F + SHPN+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 450 VPIRAY-FQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + +++G LV+ Y +G L N I + + K L + VA+G+ +
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKF 146
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-------VAYKAPE 560
+ + +H +L + N +L F ++ D+ V + A E
Sbjct: 147 LASKKF-VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE----E 616
+++ T+KSDV++FGVLL EL+T P PY PD+ + T+ + GR E
Sbjct: 206 -SLQTQKFTTKSDVWSFGVLLWELMTRGAP---PY---PDVNTFDITVYLLQGRRLLQPE 258
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657
L EV C E RP+ +++ I I + + E
Sbjct: 259 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 299
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 106/252 (42%), Gaps = 14/252 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 129
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIE-GRMHDEKVD 188
Query: 574 VYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSLKS 633
+++ GVL E L GK P+ A + R RV+ + ++ S +
Sbjct: 189 LWSLGVLCYEFLVGK----PPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 634 PEQRPAMWQVLK 645
P QRP + +VL+
Sbjct: 245 PSQRPMLREVLE 256
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 99/226 (43%), Gaps = 23/226 (10%)
Query: 373 SLVFCAGESEVYSLEQLMRASAELLGRGSIGTTYKAVLDNHLI----VTVKRFDANKTAD 428
S+ CA E +L++ +G+G+ K L H++ V +K D +
Sbjct: 3 SIASCADEQPHIGNYRLLKT----IGKGNFA---KVKLARHILTGREVAIKIIDKTQLNP 55
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLI--HGSRSIRA 486
TS + + + + L+HPN+V + + + +I +Y G +F+ + HG R
Sbjct: 56 TSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG----RM 111
Query: 487 KPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXX 546
K S + + + Y H+ ++H +LK+ N+LL AD ++ D+
Sbjct: 112 KEKEARSKFR---QIVSAVQYCHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167
Query: 547 XXXXPDTVA--YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
A Y APE+ + + + DV++ GV+L L++G P
Sbjct: 168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 22/223 (9%)
Query: 379 GESEVYSLEQLMRASAELLGRGSIGTTYKAVLDNHLI----VTVKRFDANKTADTSAEAF 434
G S + EQ + LL G K L H++ V VK D + +S +
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLI--HG---SRSIRAKPL 489
+ + + L+HPN+V + + + ++ +Y G +F+ + HG + RAK
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK-- 118
Query: 490 HWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXX 549
+ + Y H+ +++H +LK+ N+LL AD ++ D+
Sbjct: 119 --------FRQIVSAVQYCHQ-KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL 169
Query: 550 XPDTVA--YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
A Y APE+ + + + DV++ GV+L L++G P
Sbjct: 170 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 22/271 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + ++ L +A ++ + Y+ + + I
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN-FI 379
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H NL + N L+G + ++ D+ + + APE + + + K
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIK 438
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 439 SDVWAFGVLLWEIAT---YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 493
Query: 629 CSLKSPEQRPAMWQVLKMIQEI-KESVMAED 658
C +P RP+ ++ + + + +ES ++++
Sbjct: 494 CWQWNPSDRPSFAEIHQAFETMFQESSISDE 524
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 106/252 (42%), Gaps = 14/252 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 129
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIE-GRMHDEKVD 188
Query: 574 VYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSLKS 633
+++ GVL E L GK P+ A + R RV+ + ++ S +
Sbjct: 189 LWSLGVLCYEFLVGK----PPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 634 PEQRPAMWQVLK 645
P QRP + +VL+
Sbjct: 245 PSQRPMLREVLE 256
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 146
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIE-GRMHDEKVD 205
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 206 LWSLGVLCYEFLVGKPP 222
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 132
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIE-GRMHDEKVD 191
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 192 LWSLGVLCYEFLVGKPP 208
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 22/271 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + ++ L +A ++ + Y+ + + I
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN-FI 337
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H NL + N L+G + ++ D+ + + APE + + + K
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIK 396
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 397 SDVWAFGVLLWEIAT---YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 451
Query: 629 CSLKSPEQRPAMWQVLKMIQEI-KESVMAED 658
C +P RP+ ++ + + + +ES ++++
Sbjct: 452 CWQWNPSDRPSFAEIHQAFETMFQESSISDE 482
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 397 LGRGSIGTTYKAVLDNHLI----VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPI 452
+G+G+ K L H++ V +K D + TS + + + + L+HPN+V +
Sbjct: 20 IGKGNFA---KVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 76
Query: 453 RAYFQAKGERLVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + +I +Y G +F+ + HG R K S + + + Y H+
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVFDYLVAHG----RMKEKEARSKFR---QIVSAVQYCHQ 129
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA----YKAPEIRKSSR 566
++H +LK+ N+LL AD ++ D+ DT Y APE+ + +
Sbjct: 130 KR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL--DTFCGSPPYAAPELFQGKK 186
Query: 567 RATSKSDVYAFGVLLLELLTGKHP 590
+ DV++ GV+L L++G P
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 396 LLGRGSIGTTYKA---VLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPI 452
+LG+GS G K + V V + K DTS + +E + L HPN++ +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST--ILREVELLKKLDHPNIMKL 86
Query: 453 RAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
+ ++ + G LF+ I I+ K +I + V G+ Y+H+ +
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 513 WLIHGNLKSSNVLLGA---DFEARLTDYCXXXXXXXXXXXXP--DTVAYKAPEIRKSSRR 567
++H +LK N+LL + D + ++ D+ T Y APE+ + +
Sbjct: 142 -IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-- 198
Query: 568 ATSKSDVYAFGVLLLELLTGKHP 590
K DV++ GV+L LL+G P
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 128
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ R K D
Sbjct: 129 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVD 187
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 188 LWSLGVLCYEFLVGKPP 204
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 129
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIE-GRMHDEKVD 188
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 189 LWSLGVLCYEFLVGKPP 205
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 28/225 (12%)
Query: 395 ELLGRGSIGTTYKAVL----DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
++LG G GT +K V ++ I + +K+ S +A HM A+G L H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ +LV Y P GSL + + R L L +A+G+ Y+
Sbjct: 79 RLLGLCPGSSLQLVT-QYLPLGSLLDHVRQHRGALGPQL----LLNWGVQIAKGMYYLEE 133
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIRKSSR---- 566
++H NL + NVLL + + ++ D+ PD E + +
Sbjct: 134 HG-MVHRNLAARNVLLKSPSQVQVADF------GVADLLPPDDKQLLYSEAKTPIKWMAL 186
Query: 567 ------RATSKSDVYAFGVLLLELLT-GKHPSQHPYLAP-PDMLE 603
+ T +SDV+++GV + EL+T G P LA PD+LE
Sbjct: 187 ESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE 231
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 28/225 (12%)
Query: 395 ELLGRGSIGTTYKAVL----DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
++LG G GT +K V ++ I + +K+ S +A HM A+G L H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ +LV Y P GSL + + R L L +A+G+ Y+
Sbjct: 97 RLLGLCPGSSLQLVT-QYLPLGSLLDHVRQHRGALGPQL----LLNWGVQIAKGMYYLEE 151
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIRKSSR---- 566
++H NL + NVLL + + ++ D+ PD E + +
Sbjct: 152 HG-MVHRNLAARNVLLKSPSQVQVADF------GVADLLPPDDKQLLYSEAKTPIKWMAL 204
Query: 567 ------RATSKSDVYAFGVLLLELLT-GKHPSQHPYLAP-PDMLE 603
+ T +SDV+++GV + EL+T G P LA PD+LE
Sbjct: 205 ESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE 249
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 132
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIE-GRMHDEKVD 191
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 192 LWSLGVLCYEFLVGKPP 208
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 133
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 134 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIE-GRMHDEKVD 192
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 193 LWSLGVLCYEFLVGKPP 209
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 134
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIE-GRMHDEKVD 193
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 194 LWSLGVLCYEFLVGKPP 210
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 130
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIE-GRMHDEKVD 189
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 190 LWSLGVLCYEFLVGKPP 206
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 129
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIE-GRMHDEKVD 188
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 189 LWSLGVLCYEFLVGKPP 205
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 130
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIE-GRMHDEKVD 189
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 190 LWSLGVLCYEFLVGKPP 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKR--FDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + + F A + +E L HPN++ +
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 126
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ R K D
Sbjct: 127 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVD 185
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 186 LWSLGVLCYEFLVGKPP 202
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 129
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ R K D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEM-IEGRMHDEKVD 188
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 189 LWSLGVLCYEFLVGKPP 205
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 129
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ R K D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEM-IEGRMHDEKVD 188
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 189 LWSLGVLCYEFLVGKPP 205
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 132
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ R K D
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKVD 191
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 192 LWSLGVLCYEFLVGKPP 208
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 22/271 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + + L +A ++ + Y+ + + I
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKN-FI 340
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H NL + N L+G + ++ D+ + + APE + + + K
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIK 399
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 400 SDVWAFGVLLWEIAT---YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 454
Query: 629 CSLKSPEQRPAMWQVLKMIQEI-KESVMAED 658
C +P RP+ ++ + + + +ES ++++
Sbjct: 455 CWQWNPSDRPSFAEIHQAFETMFQESSISDE 485
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 131
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 132 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIE-GRMHDEKVD 190
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 191 LWSLGVLCYEFLVGKPP 207
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 25/286 (8%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAE-----AFEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ V + + A KT + +A F + + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK-----PLHWTSCLKIAEDVAQGLA 506
+ LVI + G L + + R A P + +++A ++A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 507 YIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKAPEI 561
Y++ A+ +H +L + N ++ DF ++ D+ V + +PE
Sbjct: 153 YLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 211
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDGREENRL 619
K T+ SDV++FGV+L E+ T ++ PY L+ +L +V + D + +N
Sbjct: 212 LKDGV-FTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVMEGGLLD-KPDNCP 266
Query: 620 GMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDNAAFGYS 665
ML E+ +C +P+ RP+ +++ I+E E E +F YS
Sbjct: 267 DMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE--VSFYYS 310
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 396 LLGRGSIGTTYKA---VLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPI 452
+LG+GS G K + V V + K DTS + +E + L HPN++ +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST--ILREVELLKKLDHPNIMKL 86
Query: 453 RAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
+ ++ + G LF+ I I+ K +I + V G+ Y+H+ +
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 513 WLIHGNLKSSNVLLGA---DFEARLTDYCXXXXXXXXXXXXP--DTVAYKAPEIRKSSRR 567
++H +LK N+LL + D + ++ D+ T Y APE+ + +
Sbjct: 142 -IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-- 198
Query: 568 ATSKSDVYAFGVLLLELLTGKHP 590
K DV++ GV+L LL+G P
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 34/215 (15%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDAN-------------KTADTSAEAFEQHMEAV 441
++LG+GS G + L+ V R D+ K D E+ + +
Sbjct: 34 KVLGQGSFGKVF-------LVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMER--DIL 84
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
++HP +V + FQ +G+ +I D+ G LF + + + + +AE +
Sbjct: 85 ADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY----LAE-L 139
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKA 558
A GL ++H +I+ +LK N+LL + +LTD+ TV Y A
Sbjct: 140 ALGLDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMA 198
Query: 559 PEIRKSSRRATSKS-DVYAFGVLLLELLTGKHPSQ 592
PE+ +R+ S S D +++GVL+ E+LTG P Q
Sbjct: 199 PEV--VNRQGHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 26/225 (11%)
Query: 379 GESEVYSLEQLMRASAELLGRGSIGTTYKAVLDNHLI----VTVKRFDANKTADTSAEAF 434
G S + EQ + LL G K L H++ V V+ D + +S +
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKL 60
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLI--HG---SRSIRAKPL 489
+ + + L+HPN+V + + + ++ +Y G +F+ + HG + RAK
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK-- 118
Query: 490 HWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXX 549
+ + Y H+ +++H +LK+ N+LL AD ++ D+
Sbjct: 119 --------FRQIVSAVQYCHQ-KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL 169
Query: 550 XPDTVA----YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
DT Y APE+ + + + DV++ GV+L L++G P
Sbjct: 170 --DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 396 LLGRGSIGTTYKA---VLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPI 452
+LG+GS G K + V V + K DTS + +E + L HPN++ +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST--ILREVELLKKLDHPNIMKL 86
Query: 453 RAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
+ ++ + G LF+ I I+ K +I + V G+ Y+H+ +
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 513 WLIHGNLKSSNVLLGA---DFEARLTDYCXXXXXXXXXXXXP--DTVAYKAPEIRKSSRR 567
++H +LK N+LL + D + ++ D+ T Y APE+ + +
Sbjct: 142 -IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-- 198
Query: 568 ATSKSDVYAFGVLLLELLTGKHP 590
K DV++ GV+L LL+G P
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 134
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIE-GRMHDEKVD 193
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 194 LWSLGVLCYEFLVGKPP 210
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 132
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ + R K D
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIE-GRMHDEKVD 191
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 192 LWSLGVLCYEFLVGKPP 208
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 129
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ R K D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM-IEGRMHDEKVD 188
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 189 LWSLGVLCYEFLVGKPP 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 132
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE+ R K D
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM-IEGRMHDEKVD 191
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 192 LWSLGVLCYEFLVGKPP 208
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 91/207 (43%), Gaps = 29/207 (14%)
Query: 397 LGRGSIGTTYKAVLDNHLI----VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPI 452
+G+G+ K L H++ V VK D + TS + + + + L+HPN+V +
Sbjct: 23 IGKGNFA---KVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 453 RAYFQAKGERLVIYDYQPNGSLFNLI--HG---SRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + ++ +Y G +F+ + HG + RAK + + Y
Sbjct: 80 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK----------FRQIVSAVQY 129
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA----YKAPEIRK 563
H+ +++H +LK+ N+LL D ++ D+ DT Y APE+ +
Sbjct: 130 CHQ-KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKL--DTFCGSPPYAAPELFQ 186
Query: 564 SSRRATSKSDVYAFGVLLLELLTGKHP 590
+ + DV++ GV+L L++G P
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 19/254 (7%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + + L +A ++ + Y+ + + I
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKN-FI 131
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIK 190
Query: 572 SDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVC 629
SDV+AFGVLL E+ T G P +P + P + E + + R++ R E + E+ C
Sbjct: 191 SDVWAFGVLLWEIATYGMSP--YPGIDPSQVYELLEKDYRME--RPEGCPEKVYELMRAC 246
Query: 630 SLKSPEQRPAMWQV 643
+P RP+ ++
Sbjct: 247 WQWNPSDRPSFAEI 260
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 19/254 (7%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + + L +A ++ + Y+ + + I
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKN-FI 131
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIK 190
Query: 572 SDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVC 629
SDV+AFGVLL E+ T G P +P + P + E + + R++ R E + E+ C
Sbjct: 191 SDVWAFGVLLWEIATYGMSP--YPGIDPSQVYELLEKDYRME--RPEGCPEKVYELMRAC 246
Query: 630 SLKSPEQRPAMWQV 643
+P RP+ ++
Sbjct: 247 WQWNPSDRPSFAEI 260
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 25/286 (8%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEA-----FEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ V + + A KT + +A F + + ++V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK-----PLHWTSCLKIAEDVAQGLA 506
+ LVI + G L + + R A P + +++A ++A G+A
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 507 YIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKAPEI 561
Y++ A+ +H +L + N ++ DF ++ D+ V + +PE
Sbjct: 143 YLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 201
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDGREENRL 619
K T+ SDV++FGV+L E+ T ++ PY L+ +L +V + D + +N
Sbjct: 202 LKDGV-FTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVMEGGLLD-KPDNCP 256
Query: 620 GMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDNAAFGYS 665
ML E+ +C +P+ RP+ +++ I+E E E +F YS
Sbjct: 257 DMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE--VSFYYS 300
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 31/289 (10%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAE-----AFEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ V + + A KT + +A F + + ++V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK--------PLHWTSCLKIAEDVAQ 503
+ LVI + G L + + RS+R + P + +++A ++A
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIAD 134
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+AY++ A+ +H +L + N ++ DF ++ D+ V + +
Sbjct: 135 GMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDGREE 616
PE K T+ SDV++FGV+L E+ T ++ PY L+ +L +V + D + +
Sbjct: 194 PESLKDGV-FTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVMEGGLLD-KPD 248
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDNAAFGYS 665
N ML E+ +C +P+ RP+ +++ I+E E E +F YS
Sbjct: 249 NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE--VSFYYS 295
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 35/221 (15%)
Query: 384 YSLE--QLMRASAELLGRGSIGTTY------------KAVLDNHLIVTVKRFDANKTADT 429
YSL+ Q++R LG GS G + VL ++V +K+ T D
Sbjct: 3 YSLQDFQILRT----LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQ--VEHTND- 55
Query: 430 SAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPL 489
E+ M ++ ++HP ++ + FQ + +I DY G LF+L+ S+ P+
Sbjct: 56 -----ERLMLSI--VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRF-PNPV 107
Query: 490 HWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXX 549
A +V L Y+H +I+ +LK N+LL + ++TD+
Sbjct: 108 ----AKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYX 162
Query: 550 XPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
T Y APE+ S++ D ++FG+L+ E+L G P
Sbjct: 163 LCGTPDYIAPEV-VSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 14/203 (6%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A N I+ +K F + + + +E L HPN++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 455 YFQAKGERLVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
YF + ++ ++ P G L+ + HG E++A L Y H
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGR-------FDEQRSATFMEELADALHYCHERK 135
Query: 513 WLIHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
+IH ++K N+L+G E ++ D+ T+ Y PE+ + K
Sbjct: 136 -VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEM-IEGKTHDEK 193
Query: 572 SDVYAFGVLLLELLTGKHPSQHP 594
D++ GVL E L G P P
Sbjct: 194 VDLWCAGVLCYEFLVGMPPFDSP 216
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 116/270 (42%), Gaps = 46/270 (17%)
Query: 395 ELLGRGSIGTTYKAVLDN--HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPI 452
E +G+GS G +K + DN +V +K D + D + + + LS + +
Sbjct: 29 ERIGKGSFGEVFKGI-DNRTQQVVAIKIIDLEEAEDEIEDI----QQEITVLSQCDSSYV 83
Query: 453 RAYFQA--KGERL-VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
Y+ + KG +L +I +Y GS +L+ RA P + +++ +GL Y+H
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLL------RAGPFDEFQIATMLKEILKGLDYLH 137
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSR 566
IH ++K++NVLL + +L D+ V + APE+ + S
Sbjct: 138 SEK-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSA 196
Query: 567 RATSKSDVYAFGVLLLELLTGKHPS--QHPYLA--------PPDML-EWVRTMRVDDGRE 615
SK+D+++ G+ +EL G+ P+ HP PP ++ ++ ++ +
Sbjct: 197 Y-DSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFK------ 249
Query: 616 ENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645
E C K P RP ++LK
Sbjct: 250 --------EFIDACLNKDPSFRPTAKELLK 271
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 128/309 (41%), Gaps = 29/309 (9%)
Query: 357 VEEMAIGSQTLIKRSGSLVFCAGESEVYSLEQLMRASAELLGRGSIGTTYKAVL--DNHL 414
++ + Q L K+SG ++ A + + L E +GRG+ G + L DN L
Sbjct: 82 IDHLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTL 141
Query: 415 IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474
V VK D A+ F Q + SHPN+V + K ++ + G
Sbjct: 142 -VAVKSCRETLPPDLKAK-FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 199
Query: 475 FNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEA 532
+ G+R +R K L L++ D A G+ Y+ + IH +L + N L+
Sbjct: 200 LTFLRTEGAR-LRVKTL-----LQMVGDAAAGMEYLE-SKCCIHRDLAARNCLVTEKNVL 252
Query: 533 RLTDYCXXXXXXXXXXXXPDT-----VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT- 586
+++D+ V + APE R +S+SDV++FG+LL E +
Sbjct: 253 KISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGR-YSSESDVWSFGILLWETFSL 311
Query: 587 GKHPSQHPYLAPPDMLEWVRTMRVDDGR---EENRLGMLTEVASVCSLKSPEQRPAMWQV 643
G P +P L+ E+V GR E + + C P QRP+ +
Sbjct: 312 GASP--YPNLSNQQTREFVEK----GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTI 365
Query: 644 LKMIQEIKE 652
+ +Q I++
Sbjct: 366 YQELQSIRK 374
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 14/203 (6%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A N I+ +K F + + + +E L HPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 455 YFQAKGERLVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
YF + ++ ++ P G L+ + HG E++A L Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGR-------FDEQRSATFMEELADALHYCHERK 134
Query: 513 WLIHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
+IH ++K N+L+G E ++ D+ T+ Y PE+ + K
Sbjct: 135 -VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEM-IEGKTHDEK 192
Query: 572 SDVYAFGVLLLELLTGKHPSQHP 594
D++ GVL E L G P P
Sbjct: 193 VDLWCAGVLCYEFLVGMPPFDSP 215
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 14/203 (6%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A N I+ +K F + + + +E L HPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 455 YFQAKGERLVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
YF + ++ ++ P G L+ + HG E++A L Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGR-------FDEQRSATFMEELADALHYCHERK 134
Query: 513 WLIHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
+IH ++K N+L+G E ++ D+ T+ Y PE+ + K
Sbjct: 135 -VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEM-IEGKTHDEK 192
Query: 572 SDVYAFGVLLLELLTGKHPSQHP 594
D++ GVL E L G P P
Sbjct: 193 VDLWCAGVLCYEFLVGMPPFDSP 215
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 395 ELLGRGSIGTTYKAVLD-----NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
+++G G G YK +L + V +K A T + F +G SH N+
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD-FLGEAGIMGQFSHHNI 108
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT--SCLKIAEDVAQGLAY 507
+ + ++I +Y NG+L + +R K ++ + + +A G+ Y
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGAL------DKFLREKDGEFSVLQLVGMLRGIAAGMKY 162
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT------VAYKAPEI 561
+ ++ +H +L + N+L+ ++ +++D+ T + + APE
Sbjct: 163 LANMNY-VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 562 RKSSRRATSKSDVYAFGVLLLELLT-GKHP 590
S R+ TS SDV++FG+++ E++T G+ P
Sbjct: 222 -ISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 127/309 (41%), Gaps = 29/309 (9%)
Query: 357 VEEMAIGSQTLIKRSGSLVFCAGESEVYSLEQLMRASAELLGRGSIGTTYKAVL--DNHL 414
++ + Q L K+SG ++ A + + L E +GRG+ G + L DN L
Sbjct: 82 IDHLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTL 141
Query: 415 IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474
V VK D A+ F Q + SHPN+V + K ++ + G
Sbjct: 142 -VAVKSCRETLPPDLKAK-FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 199
Query: 475 FNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEA 532
+ G+R +R K L L++ D A G+ Y+ + IH +L + N L+
Sbjct: 200 LTFLRTEGAR-LRVKTL-----LQMVGDAAAGMEYLE-SKCCIHRDLAARNCLVTEKNVL 252
Query: 533 RLTDYCXXXXXXXXXXXXPDT-----VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT- 586
+++D+ V + APE R +S+SDV++FG+LL E +
Sbjct: 253 KISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGR-YSSESDVWSFGILLWETFSL 311
Query: 587 GKHPSQHPYLAPPDMLEWVRTMRVDDGR---EENRLGMLTEVASVCSLKSPEQRPAMWQV 643
G P +P L+ E+V GR E + + C P QRP+ +
Sbjct: 312 GASP--YPNLSNQQTREFVEK----GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTI 365
Query: 644 LKMIQEIKE 652
+ +Q I++
Sbjct: 366 YQELQSIRK 374
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 31/289 (10%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAE-----AFEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ V + + A KT + +A F + + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK--------PLHWTSCLKIAEDVAQ 503
+ LVI + G L + + RS+R + P + +++A ++A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+AY++ A+ +H +L + N ++ DF ++ D+ V + +
Sbjct: 144 GMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 202
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDGREE 616
PE K T+ SDV++FGV+L E+ T ++ PY L+ +L +V + D + +
Sbjct: 203 PESLKDGV-FTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVMEGGLLD-KPD 257
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDNAAFGYS 665
N ML E+ +C +P+ RP+ +++ I+E E E +F YS
Sbjct: 258 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE--VSFYYS 304
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 14/252 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 134
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ D+ T+ Y PE + R K D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIE-GRXHDEKVD 193
Query: 574 VYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSLKS 633
+++ GVL E L GK P+ A + R RV+ + ++ S +
Sbjct: 194 LWSLGVLCYEFLVGK----PPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 634 PEQRPAMWQVLK 645
P QRP + +VL+
Sbjct: 250 PSQRPXLREVLE 261
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 397 LGRGSIGTT----YKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + + FE+ +E + L H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 452 IRAYFQAKGER--LVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAY 507
+ + G R +I ++ P GSL + H R K L +TS + +G+ Y
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTS------QICKGMEY 132
Query: 508 IHRASWLIHGNLKSSNVLLGADFEARLTDYC------XXXXXXXXXXXXPDTVAYKAPEI 561
+ + IH +L + N+L+ + ++ D+ + + APE
Sbjct: 133 LGTKRY-IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
S+ + + SDV++FGV+L EL T S+ P
Sbjct: 192 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSP 223
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 137/315 (43%), Gaps = 34/315 (10%)
Query: 371 SGSLVFCAGESEVYSLEQLMRASAELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTS 430
S + VF E EV + M LG+GS G Y+ V + + A KT + +
Sbjct: 1 SAADVFVPDEWEVAREKITMSRE---LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA 57
Query: 431 AE-----AFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIR 485
A F + + ++V + LVI + G L + + RS+R
Sbjct: 58 ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL---RSLR 114
Query: 486 AK--------PLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDY 537
+ P + +++A ++A G+AY++ A+ +H +L + N ++ DF ++ D+
Sbjct: 115 PEMENNPVLAPPSLSKMIQMAGEIADGMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDF 173
Query: 538 CXXXXXXXXXXXXPDT-----VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQ 592
V + +PE K T+ SDV++FGV+L E+ T ++
Sbjct: 174 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT---LAE 229
Query: 593 HPY--LAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650
PY L+ +L +V + D + +N ML E+ +C +P+ RP+ +++ I+E
Sbjct: 230 QPYQGLSNEQVLRFVMEGGLLD-KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 288
Query: 651 KESVMAEDNAAFGYS 665
E E +F YS
Sbjct: 289 MEPGFRE--VSFYYS 301
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 31/289 (10%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEA-----FEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ V + + A KT + +A F + + ++V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK--------PLHWTSCLKIAEDVAQ 503
+ LVI + G L + + RS+R + P + +++A ++A
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIAD 171
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+AY++ A+ +H +L + N ++ DF ++ D+ V + +
Sbjct: 172 GMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 230
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDGREE 616
PE K T+ SDV++FGV+L E+ T ++ PY L+ +L +V + D + +
Sbjct: 231 PESLKDGV-FTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVMEGGLLD-KPD 285
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDNAAFGYS 665
N ML E+ +C +P+ RP+ +++ I+E E E +F YS
Sbjct: 286 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE--VSFYYS 332
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 13/204 (6%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVKRFDANKTADTSAE-AFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K + E + +E L HPN++ +
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
YF +I +Y P G+++ + SR + + + ++A L+Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT------ELANALSYCH-SKR 132
Query: 514 LIHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKS 572
+IH ++K N+LLG++ E ++ D+ T+ Y PE+ R K
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEKV 191
Query: 573 DVYAFGVLLLELLTGKHPSQ-HPY 595
D+++ GVL E L G P + H Y
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAHTY 215
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 19/254 (7%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + + L +A ++ + Y+ + + I
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKN-FI 131
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPE-SLAYNKFSIK 190
Query: 572 SDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV-RTMRVDDGREENRLGMLTEVASVC 629
SDV+AFGVLL E+ T G P +P + P + E + + R++ R E + E+ C
Sbjct: 191 SDVWAFGVLLWEIATYGMSP--YPGIDPSQVYELLEKDYRME--RPEGCPEKVYELMRAC 246
Query: 630 SLKSPEQRPAMWQV 643
+P RP+ ++
Sbjct: 247 WQWNPSDRPSFAEI 260
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 31/289 (10%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAE-----AFEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ V + + A KT + +A F + + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK--------PLHWTSCLKIAEDVAQ 503
+ LVI + G L + + RS+R + P + +++A ++A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+AY++ A+ +H +L + N ++ DF ++ D+ V + +
Sbjct: 137 GMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDGREE 616
PE K T+ SDV++FGV+L E+ T ++ PY L+ +L +V + D + +
Sbjct: 196 PESLKDGV-FTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVMEGGLLD-KPD 250
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDNAAFGYS 665
N ML E+ +C +P+ RP+ +++ I+E E E +F YS
Sbjct: 251 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE--VSFYYS 297
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
T E+ + ++ + L HPN++ + +F+ KG ++ + G LF+ I I K
Sbjct: 68 TDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKR 122
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA---DFEARLTDYCXXXXXXX 545
+I V G+ Y+H+ ++H +LK N+LL + D R+ D+
Sbjct: 123 FSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181
Query: 546 XXXXXPD--TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTG 587
T Y APE+ + K DV++ GV+L LL+G
Sbjct: 182 SKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSG 223
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 31/289 (10%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAE-----AFEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ V + + A KT + +A F + + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK--------PLHWTSCLKIAEDVAQ 503
+ LVI + G L + + RS+R + P + +++A ++A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIAD 149
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+AY++ A+ +H +L + N ++ DF ++ D+ V + +
Sbjct: 150 GMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDGREE 616
PE K T+ SDV++FGV+L E+ T ++ PY L+ +L +V + D + +
Sbjct: 209 PESLKDGV-FTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVMEGGLLD-KPD 263
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDNAAFGYS 665
N ML E+ +C +P+ RP+ +++ I+E E E +F YS
Sbjct: 264 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE--VSFYYS 310
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 31/289 (10%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAE-----AFEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ V + + A KT + +A F + + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK--------PLHWTSCLKIAEDVAQ 503
+ LVI + G L + + RS+R + P + +++A ++A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+AY++ A+ +H +L + N ++ DF ++ D+ V + +
Sbjct: 144 GMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 202
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDGREE 616
PE K T+ SDV++FGV+L E+ T ++ PY L+ +L +V + D + +
Sbjct: 203 PESLKDGV-FTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVMEGGLLD-KPD 257
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDNAAFGYS 665
N ML E+ +C +P+ RP+ +++ I+E E E +F YS
Sbjct: 258 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE--VSFYYS 304
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 123/294 (41%), Gaps = 43/294 (14%)
Query: 387 EQLMRASAELLGRGSIGTTYKA-VLD---NHLIVTVKRFDANKTADTSAEAFEQHMEAVG 442
E+++ S ++G+G G Y +D N + +K + T EAF + +
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL-SRITEMQQVEAFLREGLLMR 77
Query: 443 GLSHPNLVP-IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
GL+HPN++ I +G V+ Y +G L I RS + P + V
Sbjct: 78 GLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI---RSPQRNPT-VKDLISFGLQV 133
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEI 561
A+G+ Y+ + +H +L + N +L F ++ D+ D Y +
Sbjct: 134 ARGMEYLAEQKF-VHRDLAARNCMLDESFTVKVADFGLARDIL-------DREYYSVQQH 185
Query: 562 RKS-------------SRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT 607
R + + R T+KSDV++FGVLL ELLT G P +H + P D+ T
Sbjct: 186 RHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRH--IDPFDL-----T 238
Query: 608 MRVDDGRE----ENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657
+ GR E L +V C P RP ++ +++I +++ +
Sbjct: 239 HFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
T E+ + ++ + L HPN++ + +F+ KG ++ + G LF+ I I K
Sbjct: 74 TDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKR 128
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYCXXXXXXX 545
+I V G+ Y+H+ ++H +LK N+LL D R+ D+
Sbjct: 129 FSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 187
Query: 546 XXXXXPD--TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTG 587
T Y APE+ + K DV++ GV+L LL+G
Sbjct: 188 SKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSG 229
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 31/289 (10%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAE-----AFEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ V + + A KT + +A F + + ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK--------PLHWTSCLKIAEDVAQ 503
+ LVI + G L + + RS+R + P + +++A ++A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+AY++ A+ +H +L + N ++ DF ++ D+ V + +
Sbjct: 143 GMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDGREE 616
PE K T+ SDV++FGV+L E+ T ++ PY L+ +L +V + D + +
Sbjct: 202 PESLKDGV-FTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVMEGGLLD-KPD 256
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDNAAFGYS 665
N ML E+ +C +P+ RP+ +++ I+E E E +F YS
Sbjct: 257 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE--VSFYYS 303
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 22/223 (9%)
Query: 379 GESEVYSLEQLMRASAELLGRGSIGTTYKAVLDNHLI----VTVKRFDANKTADTSAEAF 434
G S + EQ + LL G K L H++ V VK D + +S +
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLI--HG---SRSIRAKPL 489
+ + L+HPN+V + + + ++ +Y G +F+ + HG + RAK
Sbjct: 61 FREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAK-- 118
Query: 490 HWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXX 549
+ + Y H+ +++H +LK+ N+LL AD ++ D+
Sbjct: 119 --------FRQIVSAVQYCHQ-KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKL 169
Query: 550 XPDTVA--YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
A Y APE+ + + + DV++ GV+L L++G P
Sbjct: 170 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 22/223 (9%)
Query: 379 GESEVYSLEQLMRASAELLGRGSIGTTYKAVLDNHLI----VTVKRFDANKTADTSAEAF 434
G S + EQ + LL G K L H++ V V+ D + +S +
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKL 60
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLI--HG---SRSIRAKPL 489
+ + + L+HPN+V + + + ++ +Y G +F+ + HG + RAK
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK-- 118
Query: 490 HWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXX 549
+ + Y H+ +++H +LK+ N+LL AD ++ D+
Sbjct: 119 --------FRQIVSAVQYCHQ-KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL 169
Query: 550 XP--DTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+ Y APE+ + + + DV++ GV+L L++G P
Sbjct: 170 DEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 13/204 (6%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVKRFDANKTADTSAE-AFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K + E + +E L HPN++ +
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHG-SRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
YF +I +Y P G+++ + SR + + + ++A L+Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT------ELANALSYCH-SKR 132
Query: 514 LIHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKS 572
+IH ++K N+LLG++ E ++ D+ T+ Y PE+ R K
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEM-IEGRMHDEKV 191
Query: 573 DVYAFGVLLLELLTGKHPSQ-HPY 595
D+++ GVL E L G P + H Y
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAHTY 215
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 21/255 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + ++ L +A ++ + Y+ + + I
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN-FI 138
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIK 197
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 198 SDVWAFGVLLWEIATY---GMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 252
Query: 629 CSLKSPEQRPAMWQV 643
C +P RP+ ++
Sbjct: 253 CWQWNPSDRPSFAEI 267
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 38/215 (17%)
Query: 396 LLGRGSIGTTYKA---------------VLDNHLIVTVKRFDANKTADTSAEAFEQHMEA 440
+LG+G G ++ VL +IV +A TA T AE +E
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR----NAKDTAHTKAE--RNILEE 77
Query: 441 VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAED 500
V HP +V + FQ G+ +I +Y G LF + + T+C +AE
Sbjct: 78 V---KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIF----MEDTACFYLAE- 129
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXXXXXXXXXXXX-PDTVAYK 557
++ L ++H+ +I+ +LK N++L +LTD+ C T+ Y
Sbjct: 130 ISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYM 188
Query: 558 APEI--RKSSRRATSKSDVYAFGVLLLELLTGKHP 590
APEI R RA D ++ G L+ ++LTG P
Sbjct: 189 APEILMRSGHNRAV---DWWSLGALMYDMLTGAPP 220
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E +G+G+ GT Y A +D V N E + + +PN+V
Sbjct: 27 EKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
+ E V+ +Y GSL +++ + + + + Q L ++H ++ +
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLH-SNQV 138
Query: 515 IHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATS- 570
IH N+KS N+LLG D +LTD+ V + APE+ +R+A
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV--VTRKAYGP 196
Query: 571 KSDVYAFGVLLLELLTGKHP 590
K D+++ G++ +E++ G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 31/289 (10%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAE-----AFEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ V + + A KT + +A F + + ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK--------PLHWTSCLKIAEDVAQ 503
+ LVI + G L + + RS+R + P + +++A ++A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+AY++ A+ +H +L + N ++ DF ++ D+ V + +
Sbjct: 143 GMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDGREE 616
PE K T+ SDV++FGV+L E+ T ++ PY L+ +L +V + D + +
Sbjct: 202 PESLKDGV-FTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVMEGGLLD-KPD 256
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDNAAFGYS 665
N ML E+ +C +P+ RP+ +++ I+E E E +F YS
Sbjct: 257 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE--VSFYYS 303
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 19/224 (8%)
Query: 381 SEVYSLEQLMRASAELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEA 440
SE +E L +GRG+ G YKA + + S A + +
Sbjct: 13 SERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACRE-IAL 71
Query: 441 VGGLSHPNLVPIRAYFQAKGERLV--IYDYQPNGSLFNLIHGSRSIRA--KPLHWTSCL- 495
+ L HPN++ ++ F + +R V ++DY + L+++I R+ +A KP+ +
Sbjct: 72 LRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMV 130
Query: 496 -KIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEAR----LTDYCXXXXXXXXXXXX 550
+ + G+ Y+H A+W++H +LK +N+L+ + R + D
Sbjct: 131 KSLLYQILDGIHYLH-ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL 189
Query: 551 PD------TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
D T Y+APE+ +R T D++A G + ELLT +
Sbjct: 190 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 21/255 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + ++ L +A ++ + Y+ + + I
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN-FI 134
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIK 193
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 194 SDVWAFGVLLWEIAT---YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 248
Query: 629 CSLKSPEQRPAMWQV 643
C +P RP+ ++
Sbjct: 249 CWQWNPSDRPSFAEI 263
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 116/278 (41%), Gaps = 23/278 (8%)
Query: 394 AELLGRGSIGTTYKAVLDNH----LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
++LG G G+ + L L V VK + ++ E F + SHPN+
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 450 -----VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLH--WTSCLKIAEDVA 502
V I Q + +VI + G L + SR + P H + LK D+A
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSR-LETGPKHIPLQTLLKFMVDIA 157
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAP 559
G+ Y+ ++L H +L + N +L D + D+ +A K
Sbjct: 158 LGMEYLSNRNFL-HRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 560 EIRKSSRRA-TSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEW-VRTMRVDDGREE 616
I + R TSKSDV+AFGV + E+ T G P +P + +M ++ + R+ + E
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTP--YPGVQNHEMYDYLLHGHRLK--QPE 272
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESV 654
+ L L E+ C P RP + ++++ ES+
Sbjct: 273 DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 132
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ ++ T+ Y PE+ + R K D
Sbjct: 133 IHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIE-GRMHDEKVD 191
Query: 574 VYAFGVLLLELLTGKHP 590
+++ GVL E L GK P
Sbjct: 192 LWSLGVLCYEFLVGKPP 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 106/252 (42%), Gaps = 14/252 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVK-RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG+G G Y A + I+ +K F A + +E L HPN++ +
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
YF +I +Y P G+++ + + + I E +A L+Y H + +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ----RTATYITE-LANALSYCH-SKRV 131
Query: 515 IHGNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSD 573
IH ++K N+LLG+ E ++ ++ T+ Y PE+ + R K D
Sbjct: 132 IHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIE-GRMHDEKVD 190
Query: 574 VYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSLKS 633
+++ GVL E L GK P+ A + R RV+ + ++ S +
Sbjct: 191 LWSLGVLCYEFLVGK----PPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 246
Query: 634 PEQRPAMWQVLK 645
P QRP + +VL+
Sbjct: 247 PSQRPMLREVLE 258
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 38/215 (17%)
Query: 396 LLGRGSIGTTYKA---------------VLDNHLIVTVKRFDANKTADTSAEAFEQHMEA 440
+LG+G G ++ VL +IV +A TA T AE +E
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR----NAKDTAHTKAE--RNILEE 77
Query: 441 VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAED 500
V HP +V + FQ G+ +I +Y G LF + + T+C +AE
Sbjct: 78 V---KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIF----MEDTACFYLAE- 129
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXXXXXXXXXXXX-PDTVAYK 557
++ L ++H+ +I+ +LK N++L +LTD+ C T+ Y
Sbjct: 130 ISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYM 188
Query: 558 APEI--RKSSRRATSKSDVYAFGVLLLELLTGKHP 590
APEI R RA D ++ G L+ ++LTG P
Sbjct: 189 APEILMRSGHNRAV---DWWSLGALMYDMLTGAPP 220
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 20/199 (10%)
Query: 415 IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGER--LVIYDYQPNG 472
+V VK A+ ++Q ++ + L H +++ + + +GE+ ++ +Y P G
Sbjct: 45 MVAVKALKAD-CGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG 103
Query: 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEA 532
SL + + SI L L A+ + +G+AY+H A IH NL + NVLL D
Sbjct: 104 SLRDYL-PRHSIGLAQL-----LLFAQQICEGMAYLH-AQHYIHRNLAARNVLLDNDRLV 156
Query: 533 RLTDYCXXXX------XXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT 586
++ D+ V + APE K + + SDV++FGV L ELLT
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYA-SDVWSFGVTLYELLT 215
Query: 587 GKHPSQHPYLAPPDMLEWV 605
SQ P P LE +
Sbjct: 216 HCDSSQSP---PTKFLELI 231
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
T E+ + ++ + L HPN++ + +F+ KG ++ + G LF+ I I K
Sbjct: 91 TDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKR 145
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA---DFEARLTDYCXXXXXXX 545
+I V G+ Y+H+ ++H +LK N+LL + D R+ D+
Sbjct: 146 FSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 204
Query: 546 XXXXXPD--TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTG 587
T Y APE+ + K DV++ GV+L LL+G
Sbjct: 205 SKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSG 246
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 21/255 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + ++ L +A ++ + Y+ + + I
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN-FI 138
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIK 197
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 198 SDVWAFGVLLWEIATY---GMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 252
Query: 629 CSLKSPEQRPAMWQV 643
C +P RP+ ++
Sbjct: 253 CWQWNPSDRPSFAEI 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 21/255 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + ++ L +A ++ + Y+ + + I
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN-FI 138
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIK 197
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 198 SDVWAFGVLLWEIATY---GMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 252
Query: 629 CSLKSPEQRPAMWQV 643
C +P RP+ ++
Sbjct: 253 CWQWNPSDRPSFAEI 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 21/255 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + ++ L +A ++ + Y+ + + I
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN-FI 137
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIK 196
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 197 SDVWAFGVLLWEIATY---GMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 251
Query: 629 CSLKSPEQRPAMWQV 643
C +P RP+ ++
Sbjct: 252 CWQWNPSDRPSFAEI 266
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
T E+ + ++ + L HPN++ + +F+ KG ++ + G LF+ I I K
Sbjct: 92 TDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKR 146
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA---DFEARLTDYCXXXXXXX 545
+I V G+ Y+H+ ++H +LK N+LL + D R+ D+
Sbjct: 147 FSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 205
Query: 546 XXXXXPD--TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTG 587
T Y APE+ + K DV++ GV+L LL+G
Sbjct: 206 SKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSG 247
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 21/255 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + ++ L +A ++ + Y+ + + I
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN-FI 133
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIK 192
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 193 SDVWAFGVLLWEIATY---GMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 247
Query: 629 CSLKSPEQRPAMWQV 643
C +P RP+ ++
Sbjct: 248 CWQWNPSDRPSFAEI 262
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 21/255 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + ++ L +A ++ + Y+ + + I
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN-FI 138
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIK 197
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 198 SDVWAFGVLLWEIAT---YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 252
Query: 629 CSLKSPEQRPAMWQV 643
C +P RP+ ++
Sbjct: 253 CWQWNPSDRPSFAEI 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 21/255 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + ++ L +A ++ + Y+ + + I
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN-FI 146
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIK 205
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 206 SDVWAFGVLLWEIAT---YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 260
Query: 629 CSLKSPEQRPAMWQV 643
C +P RP+ ++
Sbjct: 261 CWQWNPSDRPSFAEI 275
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 21/255 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + ++ L +A ++ + Y+ + + I
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN-FI 133
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIK 192
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 193 SDVWAFGVLLWEIATY---GMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 247
Query: 629 CSLKSPEQRPAMWQV 643
C +P RP+ ++
Sbjct: 248 CWQWNPSDRPSFAEI 262
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 395 ELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAE-AFEQHMEAVGGLSHPNLVPI 452
E+LG G + + A L +H V VK A+ D S F + + L+HP +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 453 RAYFQAKGER------LVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLA 506
Y + E ++ +Y +L +++H P+ +++ D Q L
Sbjct: 78 --YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALN 130
Query: 507 YIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA------YKAPE 560
+ H+ + +IH ++K +N+L+ A ++ D+ T A Y +PE
Sbjct: 131 FSHQ-NGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+ ++SDVY+ G +L E+LTG+ P
Sbjct: 190 QARGDS-VDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 20/199 (10%)
Query: 415 IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGER--LVIYDYQPNG 472
+V VK A+ ++Q ++ + L H +++ + + +GE+ ++ +Y P G
Sbjct: 45 MVAVKALKAD-CGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG 103
Query: 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEA 532
SL + + SI L L A+ + +G+AY+H + IH NL + NVLL D
Sbjct: 104 SLRDYL-PRHSIGLAQL-----LLFAQQICEGMAYLHSQHY-IHRNLAARNVLLDNDRLV 156
Query: 533 RLTDYCXXXX------XXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT 586
++ D+ V + APE K + + SDV++FGV L ELLT
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYA-SDVWSFGVTLYELLT 215
Query: 587 GKHPSQHPYLAPPDMLEWV 605
SQ P P LE +
Sbjct: 216 HCDSSQSP---PTKFLELI 231
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E +G+G+ GT Y A +D V N E + + +PN+V
Sbjct: 26 EKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
+ E V+ +Y GSL +++ + + + + Q L ++H ++ +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLH-SNQV 137
Query: 515 IHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATS- 570
IH ++KS N+LLG D +LTD+ + V + APE+ +R+A
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEV--VTRKAYGP 195
Query: 571 KSDVYAFGVLLLELLTGKHP 590
K D+++ G++ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 88/212 (41%), Gaps = 30/212 (14%)
Query: 394 AELLGRGSIG----TTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E+LG+G G T++ + ++ + RFD + + F + ++ + L HPN+
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-----EETQRTFLKEVKVMRCLEHPNV 69
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
+ I +Y G+L +I S W+ + A+D+A G+AY+H
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS----QYPWSQRVSFAKDIASGMAYLH 125
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIRK------ 563
+ +IH +L S N L+ + + D+ + K P+ +K
Sbjct: 126 SMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184
Query: 564 ----------SSRRATSKSDVYAFGVLLLELL 585
+ R K DV++FG++L E++
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 21/255 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + ++ L +A ++ + Y+ + + I
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN-FI 135
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIK 194
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 195 SDVWAFGVLLWEIAT---YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 249
Query: 629 CSLKSPEQRPAMWQV 643
C +P RP+ ++
Sbjct: 250 CWQWNPSDRPSFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 21/255 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + ++ L +A ++ + Y+ + + I
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN-FI 135
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIK 194
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 195 SDVWAFGVLLWEIAT---YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 249
Query: 629 CSLKSPEQRPAMWQV 643
C +P RP+ ++
Sbjct: 250 CWQWNPSDRPSFAEI 264
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 18/184 (9%)
Query: 416 VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA--KGERLVIYDYQPNGS 473
+ VK + + F + + SHPN++P+ Q+ +I + P GS
Sbjct: 36 IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGS 95
Query: 474 LFNLIH-GSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI-HGNLKSSNVLLGADFE 531
L+N++H G+ + + + +K A D+A+G+A++H LI L S +V++ D
Sbjct: 96 LYNVLHEGTNFVVDQ----SQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMT 151
Query: 532 ARLTDYCXXXXXXXXXXXXPDTV---AYKAPEIRKSSRRATSK--SDVYAFGVLLLELLT 586
AR++ P + A+ APE + T++ +D+++F VLL EL+T
Sbjct: 152 ARIS-----MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206
Query: 587 GKHP 590
+ P
Sbjct: 207 REVP 210
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 31/289 (10%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAE-----AFEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ V + + A KT + +A F + + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK--------PLHWTSCLKIAEDVAQ 503
+ LVI + G L + + RS+R + P + +++A ++A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+AY++ A+ +H +L + N + DF ++ D+ V + +
Sbjct: 137 GMAYLN-ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDGREE 616
PE K T+ SDV++FGV+L E+ T ++ PY L+ +L +V + D + +
Sbjct: 196 PESLKDGV-FTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQVLRFVMEGGLLD-KPD 250
Query: 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDNAAFGYS 665
N ML E+ +C +P+ RP+ +++ I+E E E +F YS
Sbjct: 251 NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE--VSFYYS 297
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + + L +A ++ + Y+ + + I
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKN-FI 133
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIK 192
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 193 SDVWAFGVLLWEIAT---YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 247
Query: 629 CSLKSPEQRPAMWQV 643
C +P RP+ ++
Sbjct: 248 CWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + + L +A ++ + Y+ + + I
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKN-FI 133
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIK 192
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 193 SDVWAFGVLLWEIAT---YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 247
Query: 629 CSLKSPEQRPAMWQV 643
C +P RP+ ++
Sbjct: 248 CWQWNPSDRPSFAEI 262
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G G V +K K S + F + + + LSH LV +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +I +Y NG L N + R +R + L++ +DV + + Y+ +L H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYL---REMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL-H 128
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L + N L+ +++D+ V + PE+ S + +SKS
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYS-KFSSKS 187
Query: 573 DVYAFGVLLLELLT-GKHPSQ 592
D++AFGVL+ E+ + GK P +
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYE 208
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G G V +K K S + F + + + LSH LV +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +I +Y NG L N + R +R + L++ +DV + + Y+ +L H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYL---REMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL-H 143
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L + N L+ +++D+ V + PE+ S + +SKS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYS-KFSSKS 202
Query: 573 DVYAFGVLLLELLT-GKHPSQ 592
D++AFGVL+ E+ + GK P +
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYE 223
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 114/271 (42%), Gaps = 22/271 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + + L +A ++ + Y+ + + I
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKN-FI 133
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIK 192
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 193 SDVWAFGVLLWEIAT---YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 247
Query: 629 CSLKSPEQRPAMWQVLKMIQEI-KESVMAED 658
C +P RP+ ++ + + + +ES ++++
Sbjct: 248 CWQWNPSDRPSFAEIHQAFETMFQESSISDE 278
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 114/271 (42%), Gaps = 22/271 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + + L +A ++ + Y+ + + I
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKN-FI 138
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIK 197
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 198 SDVWAFGVLLWEIAT---YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 252
Query: 629 CSLKSPEQRPAMWQVLKMIQEI-KESVMAED 658
C +P RP+ ++ + + + +ES ++++
Sbjct: 253 CWQWNPSDRPSFAEIHQAFETMFQESSISDE 283
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 114/271 (42%), Gaps = 22/271 (8%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y+ V + L V VK K E F + + + HPNLV +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ +I ++ G+L + + R + + L +A ++ + Y+ + + I
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKN-FI 133
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + + K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIK 192
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM---LTEVASV 628
SDV+AFGVLL E+ T PY P L V + D R E G + E+
Sbjct: 193 SDVWAFGVLLWEIAT---YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 247
Query: 629 CSLKSPEQRPAMWQVLKMIQEI-KESVMAED 658
C +P RP+ ++ + + + +ES ++++
Sbjct: 248 CWQWNPSDRPSFAEIHQAFETMFQESSISDE 278
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 19/204 (9%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVK--RFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
+GRGS T YK LD V V K + + F++ E + GL HPN+V
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 455 YFQA--KGERLVIY--DYQPNGSLFNLIHGSRSIRAKPLH-WTSCLKIAEDVAQGLAYIH 509
+++ KG++ ++ + +G+L + + + K L W C +I +GL ++H
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW--CRQI----LKGLQFLH 146
Query: 510 -RASWLIHGNLKSSNVLL-GADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSR 566
R +IH +LK N+ + G ++ D T + APE +
Sbjct: 147 TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYEE-- 204
Query: 567 RATSKSDVYAFGVLLLELLTGKHP 590
+ DVYAFG LE T ++P
Sbjct: 205 KYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 82/195 (42%), Gaps = 13/195 (6%)
Query: 397 LGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
LG G G Y V + L V VK K E F + + + HPNLV +
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ ++ +Y P G+L + + R + + L +A ++ + Y+ + + I
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYL---RECNREEVTAVVLLYMATQISSAMEYLEKKN-FI 152
Query: 516 HGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
H +L + N L+G + ++ D+ + + APE + + K
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE-SLAYNTFSIK 211
Query: 572 SDVYAFGVLLLELLT 586
SDV+AFGVLL E+ T
Sbjct: 212 SDVWAFGVLLWEIAT 226
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G G V +K K S + F + + + LSH LV +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +I +Y NG L N + R +R + L++ +DV + + Y+ +L H
Sbjct: 73 TKQRPIFIITEYMANGCLLNYL---REMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL-H 127
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L + N L+ +++D+ V + PE+ S + +SKS
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS-KFSSKS 186
Query: 573 DVYAFGVLLLELLT-GKHPSQ 592
D++AFGVL+ E+ + GK P +
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYE 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G G V +K K S + F + + + LSH LV +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +I +Y NG L N + R +R + L++ +DV + + Y+ +L H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYL---REMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL-H 128
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L + N L+ +++D+ V + PE+ S + +SKS
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS-KFSSKS 187
Query: 573 DVYAFGVLLLELLT-GKHPSQ 592
D++AFGVL+ E+ + GK P +
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYE 208
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G G V +K K S + F + + + LSH LV +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +I +Y NG L N + R +R + L++ +DV + + Y+ +L H
Sbjct: 69 TKQRPIFIITEYMANGCLLNYL---REMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL-H 123
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L + N L+ +++D+ V + PE+ S + +SKS
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS-KFSSKS 182
Query: 573 DVYAFGVLLLELLT-GKHPSQ 592
D++AFGVL+ E+ + GK P +
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYE 203
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G G V +K K S + F + + + LSH LV +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +I +Y NG L N + R +R + L++ +DV + + Y+ +L H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYL---REMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL-H 143
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L + N L+ +++D+ V + PE+ S + +SKS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS-KFSSKS 202
Query: 573 DVYAFGVLLLELLT-GKHPSQ 592
D++AFGVL+ E+ + GK P +
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYE 223
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 123/276 (44%), Gaps = 35/276 (12%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAE-----AFEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ + + + A KT + SA F + G + ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK--------PLHWTSCLKIAEDVAQ 503
+ LV+ + +G L + + RS+R + P +++A ++A
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+AY++ A +H NL + N ++ DF ++ D+ V + A
Sbjct: 143 GMAYLN-AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDG--- 613
PE K TS SD+++FGV+L E+ + ++ PY L+ +L++V +D G
Sbjct: 202 PESLKDGVFTTS-SDMWSFGVVLWEITS---LAEQPYQGLSNEQVLKFV----MDGGYLD 253
Query: 614 REENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQE 649
+ +N +T++ +C +P RP +++ ++++
Sbjct: 254 QPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 289
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 395 ELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAE-AFEQHMEAVGGLSHPNLVPI 452
E+LG G + + A L +H V VK A+ D S F + + L+HP +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 453 RAYFQAKGER------LVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLA 506
Y + E ++ +Y +L +++H P+ +++ D Q L
Sbjct: 78 --YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALN 130
Query: 507 YIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA------YKAPE 560
+ H+ + +IH ++K +N+++ A ++ D+ T A Y +PE
Sbjct: 131 FSHQ-NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+ ++SDVY+ G +L E+LTG+ P
Sbjct: 190 QARGDS-VDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 395 ELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAE-AFEQHMEAVGGLSHPNLVPI 452
E+LG G + + A L +H V VK A+ D S F + + L+HP +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 453 RAYFQAKGER------LVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLA 506
Y + E ++ +Y +L +++H P+ +++ D Q L
Sbjct: 78 --YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALN 130
Query: 507 YIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA------YKAPE 560
+ H+ + +IH ++K +N+++ A ++ D+ T A Y +PE
Sbjct: 131 FSHQ-NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+ ++SDVY+ G +L E+LTG+ P
Sbjct: 190 QARGDS-VDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 395 ELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAE-AFEQHMEAVGGLSHPNLVPI 452
E+LG G + + A L H V VK A+ D S F + + L+HP +V +
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 453 RAYFQAKGER----LVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYI 508
A +A+ ++ +Y +L +++H P+ +++ D Q L +
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFS 132
Query: 509 HRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA------YKAPEIR 562
H+ + +IH ++K +N+++ A ++ D+ T A Y +PE
Sbjct: 133 HQ-NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGKHP 590
+ ++SDVY+ G +L E+LTG+ P
Sbjct: 192 RGDS-VDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 396 LLGRGSIGTTYKAVLDN----HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
++GRGS L + + VK+ N D E+H+ +HP LV
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-NHPFLVG 85
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ + FQ + + +Y G L + R + + + S +++ L Y+H
Sbjct: 86 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-----EISLALNYLHER 140
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDY--CXXXXX-XXXXXXXPDTVAYKAPEIRKSSRRA 568
+I+ +LK NVLL ++ +LTDY C T Y APEI +
Sbjct: 141 G-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYG 199
Query: 569 TSKSDVYAFGVLLLELLTGKHP 590
S D +A GVL+ E++ G+ P
Sbjct: 200 FS-VDWWALGVLMFEMMAGRSP 220
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 41/285 (14%)
Query: 397 LGRGSIGTTYKAVLDN------HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
LG G+ G + A N ++V VK + ++++ + F++ E + L H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESARQDFQREAELLTMLQHQHIV 106
Query: 451 PIRAYFQAKGERLVIYDYQPNGSL----------FNLIHGSRSIRAKPLHWTSCLKIAED 500
L++++Y +G L L+ G + PL L +A
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTD-------YCXXXXXXXXXXXXPDT 553
VA G+ Y+ +H +L + N L+G ++ D Y P
Sbjct: 167 VAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP-- 223
Query: 554 VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDD 612
+ + PE R+ T++SDV++FGV+L E+ T GK P L+ + ++ +
Sbjct: 224 IRWMPPE-SILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ--LSNTEAIDC-----ITQ 275
Query: 613 GREENR-LGMLTEVASV---CSLKSPEQRPAMWQVLKMIQEIKES 653
GRE R EV ++ C + P+QR ++ V +Q + ++
Sbjct: 276 GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 396 LLGRGSIGTTYKAVLDN----HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
++GRGS L + + VK+ N D E+H+ +HP LV
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-NHPFLVG 70
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ + FQ + + +Y G L + R + + + S +++ L Y+H
Sbjct: 71 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-----EISLALNYLHER 125
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDY--CXXXXX-XXXXXXXPDTVAYKAPEIRKSSRRA 568
+I+ +LK NVLL ++ +LTDY C T Y APEI +
Sbjct: 126 G-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYG 184
Query: 569 TSKSDVYAFGVLLLELLTGKHP 590
S D +A GVL+ E++ G+ P
Sbjct: 185 FS-VDWWALGVLMFEMMAGRSP 205
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 123/276 (44%), Gaps = 35/276 (12%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAE-----AFEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ + + + A KT + SA F + G + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK--------PLHWTSCLKIAEDVAQ 503
+ LV+ + +G L + + RS+R + P +++A ++A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+AY++ A +H NL + N ++ DF ++ D+ V + A
Sbjct: 142 GMAYLN-AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDG--- 613
PE K TS SD+++FGV+L E+ + ++ PY L+ +L++V +D G
Sbjct: 201 PESLKDGVFTTS-SDMWSFGVVLWEITS---LAEQPYQGLSNEQVLKFV----MDGGYLD 252
Query: 614 REENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQE 649
+ +N +T++ +C +P RP +++ ++++
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 30/218 (13%)
Query: 397 LGRGSIGTTYKAVLDN------HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
LG G+ G + A N ++V VK + ++++ + F++ E + L H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESARQDFQREAELLTMLQHQHIV 83
Query: 451 PIRAYFQAKGERLVIYDYQPNGSL----------FNLIHGSRSIRAKPLHWTSCLKIAED 500
L++++Y +G L L+ G + PL L +A
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTD-------YCXXXXXXXXXXXXPDT 553
VA G+ Y+ +H +L + N L+G ++ D Y P
Sbjct: 144 VAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP-- 200
Query: 554 VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHP 590
+ + PE R+ T++SDV++FGV+L E+ T GK P
Sbjct: 201 IRWMPPE-SILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 396 LLGRGSIGTTYKAVLDN----HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
++GRGS L + + VK+ N D E+H+ +HP LV
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS-NHPFLVG 117
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ + FQ + + +Y G L + R + + + S +++ L Y+H
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-----EISLALNYLHER 172
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDY--CXXXXX-XXXXXXXPDTVAYKAPEIRKSSRRA 568
+I+ +LK NVLL ++ +LTDY C T Y APEI +
Sbjct: 173 G-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYG 231
Query: 569 TSKSDVYAFGVLLLELLTGKHP 590
S D +A GVL+ E++ G+ P
Sbjct: 232 FS-VDWWALGVLMFEMMAGRSP 252
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 126/284 (44%), Gaps = 38/284 (13%)
Query: 397 LGRGSIGTTYKAVLDN------HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
LG G+ G + A N ++V VK A + + F++ E + L H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLA--ARKDFQREAELLTNLQHEHIV 80
Query: 451 PIRAYFQAKGERLVIYDYQPNGSL--FNLIHGSRSI--------RAK-PLHWTSCLKIAE 499
+++++Y +G L F HG ++ +AK L + L IA
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 500 DVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTD-------YCXXXXXXXXXXXXPD 552
+A G+ Y+ + +H +L + N L+GA+ ++ D Y P
Sbjct: 141 QIASGMVYL-ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP- 198
Query: 553 TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVD 611
+ + PE R+ T++SDV++FGV+L E+ T GK P L+ +++E + RV
Sbjct: 199 -IRWMPPE-SIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQ--LSNTEVIECITQGRV- 253
Query: 612 DGREENRL--GMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKES 653
E R+ + +V C + P+QR + ++ K++ + ++
Sbjct: 254 --LERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKA 295
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 396 LLGRGSIGTTYKAVLDN----HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
++GRGS L + + VK+ N D E+H+ +HP LV
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-NHPFLVG 74
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ + FQ + + +Y G L + R + + + S +++ L Y+H
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-----EISLALNYLHER 129
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDY--CXXXXX-XXXXXXXPDTVAYKAPEIRKSSRRA 568
+I+ +LK NVLL ++ +LTDY C T Y APEI +
Sbjct: 130 G-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYG 188
Query: 569 TSKSDVYAFGVLLLELLTGKHP 590
S D +A GVL+ E++ G+ P
Sbjct: 189 FS-VDWWALGVLMFEMMAGRSP 209
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E +G+G+ GT Y A +D V N E + + +PN+V
Sbjct: 26 EKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
+ E V+ +Y GSL +++ + + + + Q L ++H ++ +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLH-SNQV 137
Query: 515 IHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATS- 570
IH ++KS N+LLG D +LTD+ V + APE+ +R+A
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEV--VTRKAYGP 195
Query: 571 KSDVYAFGVLLLELLTGKHP 590
K D+++ G++ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 30/218 (13%)
Query: 397 LGRGSIGTTYKAVLDN------HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
LG G+ G + A N ++V VK + ++++ + F++ E + L H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESARQDFQREAELLTMLQHQHIV 77
Query: 451 PIRAYFQAKGERLVIYDYQPNGSL----------FNLIHGSRSIRAKPLHWTSCLKIAED 500
L++++Y +G L L+ G + PL L +A
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTD-------YCXXXXXXXXXXXXPDT 553
VA G+ Y+ +H +L + N L+G ++ D Y P
Sbjct: 138 VAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP-- 194
Query: 554 VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHP 590
+ + PE R+ T++SDV++FGV+L E+ T GK P
Sbjct: 195 IRWMPPE-SILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E +G G+ G YKA IV +KR + + + + + L HPN+V +
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVAQGLAYIHRASW 513
++ +++++ L ++ S +KI + +G+A+ H+
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQ------DSQIKIYLYQLLRGVAHCHQHR- 139
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSRRATS 570
++H +LK N+L+ +D +L D+ T+ Y+AP++ S++ ++
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST 199
Query: 571 KSDVYAFGVLLLELLTGK 588
D+++ G + E++TGK
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E +G+G+ GT Y A +D V N E + + +PN+V
Sbjct: 27 EKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
+ E V+ +Y GSL +++ + + + + Q L ++H ++ +
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLH-SNQV 138
Query: 515 IHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATS- 570
IH ++KS N+LLG D +LTD+ V + APE+ +R+A
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEV--VTRKAYGP 196
Query: 571 KSDVYAFGVLLLELLTGKHP 590
K D+++ G++ +E++ G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G G V +K K S + F + + + LSH LV +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ +I +Y NG L N + R +R + L++ +DV + + Y+ +L H
Sbjct: 80 TKQRPIFIITEYMANGCLLNYL---REMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL-H 134
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKS 572
+L + N L+ +++D+ V + PE+ S + +SKS
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS-KFSSKS 193
Query: 573 DVYAFGVLLLELLT-GKHPSQ 592
D++AFGVL+ E+ + GK P +
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYE 214
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E +G G+ G YKA IV +KR + + + + + L HPN+V +
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVAQGLAYIHRASW 513
++ +++++ L ++ S +KI + +G+A+ H+
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQ------DSQIKIYLYQLLRGVAHCHQHR- 139
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSRRATS 570
++H +LK N+L+ +D +L D+ T+ Y+AP++ S++ ++
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST 199
Query: 571 KSDVYAFGVLLLELLTGK 588
D+++ G + E++TGK
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E +G+G+ GT Y A +D V N E + + +PN+V
Sbjct: 26 EKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
+ E V+ +Y GSL +++ + + + + Q L ++H ++ +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLH-SNQV 137
Query: 515 IHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATS- 570
IH ++KS N+LLG D +LTD+ V + APE+ +R+A
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV--VTRKAYGP 195
Query: 571 KSDVYAFGVLLLELLTGKHP 590
K D+++ G++ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
T E+ + ++ + L HPN+ + +F+ KG ++ + G LF+ I I K
Sbjct: 68 TDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKR 122
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA---DFEARLTDYCXXXXXXX 545
+I V G+ Y H+ ++H +LK N+LL + D R+ D+
Sbjct: 123 FSEVDAARIIRQVLSGITYXHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181
Query: 546 XXXXXPD--TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTG 587
T Y APE+ + K DV++ GV+L LL+G
Sbjct: 182 SKKXKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSG 223
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 103/241 (42%), Gaps = 30/241 (12%)
Query: 380 ESEVYSLEQLMRASAELLGRGSIGTTYKAVL-----DNHLIVTVKRFDANKTADTSAEAF 434
++++ L++ ++LG G+ GT YK + + V +K + + E
Sbjct: 29 QAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFM 88
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSC 494
++ + + + HP+LV + + +LV P+G L +H + L C
Sbjct: 89 DEAL-IMASMDHPHLVRLLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQLLLNWC 146
Query: 495 LKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTV 554
++IA +G+ Y+ L+H +L + NVL+ + ++TD+ D
Sbjct: 147 VQIA----KGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEG------DEK 195
Query: 555 AYKAPEIRK----------SSRRATSKSDVYAFGVLLLELLT--GKHPSQHPYLAPPDML 602
Y A + R+ T +SDV+++GV + EL+T GK P PD+L
Sbjct: 196 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL 255
Query: 603 E 603
E
Sbjct: 256 E 256
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ DY
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDYGLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 103/241 (42%), Gaps = 30/241 (12%)
Query: 380 ESEVYSLEQLMRASAELLGRGSIGTTYKAVL-----DNHLIVTVKRFDANKTADTSAEAF 434
++++ L++ ++LG G+ GT YK + + V +K + + E
Sbjct: 6 QAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFM 65
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSC 494
++ + + + HP+LV + + +LV P+G L +H + L C
Sbjct: 66 DEAL-IMASMDHPHLVRLLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQLLLNWC 123
Query: 495 LKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTV 554
++IA +G+ Y+ L+H +L + NVL+ + ++TD+ D
Sbjct: 124 VQIA----KGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEG------DEK 172
Query: 555 AYKAPEIRK----------SSRRATSKSDVYAFGVLLLELLT--GKHPSQHPYLAPPDML 602
Y A + R+ T +SDV+++GV + EL+T GK P PD+L
Sbjct: 173 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL 232
Query: 603 E 603
E
Sbjct: 233 E 233
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 127/276 (46%), Gaps = 35/276 (12%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAE-----AFEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ + + + A KT + SA F + G + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK--------PLHWTSCLKIAEDVAQ 503
+ LV+ + +G L + + RS+R + P +++A ++A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+AY++ A +H +L + N ++ DF ++ D+ V + A
Sbjct: 142 GMAYLN-AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDG--- 613
PE K TS SD+++FGV+L E+ + ++ PY L+ +L++V +D G
Sbjct: 201 PESLKDGVFTTS-SDMWSFGVVLWEITS---LAEQPYQGLSNEQVLKFV----MDGGYLD 252
Query: 614 REENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQE 649
+ +N +T++ +C +P+ RP +++ ++++
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 127/276 (46%), Gaps = 35/276 (12%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAE-----AFEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ + + + A KT + SA F + G + ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK--------PLHWTSCLKIAEDVAQ 503
+ LV+ + +G L + + RS+R + P +++A ++A
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 138
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+AY++ A +H +L + N ++ DF ++ D+ V + A
Sbjct: 139 GMAYLN-AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDG--- 613
PE K TS SD+++FGV+L E+ + ++ PY L+ +L++V +D G
Sbjct: 198 PESLKDGVFTTS-SDMWSFGVVLWEITS---LAEQPYQGLSNEQVLKFV----MDGGYLD 249
Query: 614 REENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQE 649
+ +N +T++ +C +P+ RP +++ ++++
Sbjct: 250 QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 285
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 124/276 (44%), Gaps = 35/276 (12%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAE-----AFEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ + + + A KT + SA F + G + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK--------PLHWTSCLKIAEDVAQ 503
+ LV+ + +G L + + RS+R + P +++A ++A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+AY++ A +H +L + N ++ DF ++ D+ V + A
Sbjct: 142 GMAYLN-AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDG--- 613
PE K TS SD+++FGV+L E+ + ++ PY L+ +L++V +D G
Sbjct: 201 PESLKDGVFTTS-SDMWSFGVVLWEITS---LAEQPYQGLSNEQVLKFV----MDGGYLD 252
Query: 614 REENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQE 649
+ +N +T++ +C +P+ RP +++ ++++
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G+ G +K +V ++ + + ++ + + P +V F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ GE + ++ GSL ++ + I + L K++ V +GL Y+ ++H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMH 128
Query: 517 GNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVY 575
++K SN+L+ + E +L D+ T +Y +PE R + +SD++
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIW 187
Query: 576 AFGVLLLELLTGKHPSQHPYLAPPDMLEWVR 606
+ G+ L+E+ G++P + PPD E R
Sbjct: 188 SMGLSLVEMAVGRYP-----IPPPDAKEDSR 213
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 124/276 (44%), Gaps = 35/276 (12%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAE-----AFEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ + + + A KT + SA F + G + ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK--------PLHWTSCLKIAEDVAQ 503
+ LV+ + +G L + + RS+R + P +++A ++A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+AY++ A +H +L + N ++ DF ++ D+ V + A
Sbjct: 141 GMAYLN-AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDG--- 613
PE K TS SD+++FGV+L E+ + ++ PY L+ +L++V +D G
Sbjct: 200 PESLKDGVFTTS-SDMWSFGVVLWEITS---LAEQPYQGLSNEQVLKFV----MDGGYLD 251
Query: 614 REENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQE 649
+ +N +T++ +C +P+ RP +++ ++++
Sbjct: 252 QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 287
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
H N+V + + E V+ ++ G+L +++ R L+ + E V Q L
Sbjct: 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR------LNEEQIATVCEAVLQAL 154
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIR 562
AY+H A +IH ++KS ++LL D +L+D+ V + APE+
Sbjct: 155 AYLH-AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVI 213
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGKHP 590
S AT + D+++ G++++E++ G+ P
Sbjct: 214 SRSLYAT-EVDIWSLGIMVIEMVDGEPP 240
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI ++ D+++ G ++ ELLTG+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 124/276 (44%), Gaps = 35/276 (12%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAE-----AFEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ + + + A KT + SA F + G + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK--------PLHWTSCLKIAEDVAQ 503
+ LV+ + +G L + + RS+R + P +++A ++A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+AY++ A +H +L + N ++ DF ++ D+ V + A
Sbjct: 142 GMAYLN-AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDG--- 613
PE K TS SD+++FGV+L E+ + ++ PY L+ +L++V +D G
Sbjct: 201 PESLKDGVFTTS-SDMWSFGVVLWEITS---LAEQPYQGLSNEQVLKFV----MDGGYLD 252
Query: 614 REENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQE 649
+ +N +T++ +C +P+ RP +++ ++++
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 38/221 (17%)
Query: 397 LGRGSIGTTYKAVLDNHL--IVTVKR-FDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
LG+G+ G +K++ D +V VK+ FDA + + + F + M H N+V +
Sbjct: 17 LGKGAYGIVWKSI-DRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 454 AYFQAKGERLV--IYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+A +R V ++DY +H IRA L + + + + Y+H
Sbjct: 76 NVLRADNDRDVYLVFDYMETD-----LHAV--IRANILEPVHKQYVVYQLIKVIKYLHSG 128
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXX--------------------- 550
L+H ++K SN+LL A+ ++ D+
Sbjct: 129 G-LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 551 PDTVA---YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
D VA Y+APEI S + T D+++ G +L E+L GK
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 12/208 (5%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G+ G +K +V ++ + + ++ + + P +V F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ GE + ++ GSL ++ + I + L K++ V +GL Y+ ++H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMH 128
Query: 517 GNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVY 575
++K SN+L+ + E +L D+ T +Y +PE R + +SD++
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIW 187
Query: 576 AFGVLLLELLTGKHPSQHPYLAPPDMLE 603
+ G+ L+E+ G++P + PPD E
Sbjct: 188 SMGLSLVEMAVGRYP-----IPPPDAKE 210
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 12/208 (5%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G+ G +K +V ++ + + ++ + + P +V F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ GE + ++ GSL ++ + I + L K++ V +GL Y+ ++H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMH 128
Query: 517 GNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVY 575
++K SN+L+ + E +L D+ T +Y +PE R + +SD++
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIW 187
Query: 576 AFGVLLLELLTGKHPSQHPYLAPPDMLE 603
+ G+ L+E+ G++P + PPD E
Sbjct: 188 SMGLSLVEMAVGRYP-----IPPPDAKE 210
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 12/208 (5%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G+ G +K +V ++ + + ++ + + P +V F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ GE + ++ GSL ++ + I + L K++ V +GL Y+ ++H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMH 128
Query: 517 GNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVY 575
++K SN+L+ + E +L D+ T +Y +PE R + +SD++
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIW 187
Query: 576 AFGVLLLELLTGKHPSQHPYLAPPDMLE 603
+ G+ L+E+ G++P + PPD E
Sbjct: 188 SMGLSLVEMAVGRYP-----IPPPDAKE 210
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 126/276 (45%), Gaps = 35/276 (12%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAE-----AFEQHMEAVGGLSHPNLVP 451
LG+GS G Y+ + + + A KT + SA F + G + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK--------PLHWTSCLKIAEDVAQ 503
+ LV+ + +G L + + RS+R + P +++A ++A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYL---RSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+AY++ A +H +L + N ++ DF ++ D+ V + A
Sbjct: 142 GMAYLN-AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY--LAPPDMLEWVRTMRVDDG--- 613
PE K TS SD+++FGV+L E+ + ++ PY L+ +L++V +D G
Sbjct: 201 PESLKDGVFTTS-SDMWSFGVVLWEITS---LAEQPYQGLSNEQVLKFV----MDGGYLD 252
Query: 614 REENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQE 649
+ +N +T++ +C +P RP +++ ++++
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 12/208 (5%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G+ G +K +V ++ + + ++ + + P +V F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ GE + ++ GSL ++ + I + L K++ V +GL Y+ ++H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMH 128
Query: 517 GNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVY 575
++K SN+L+ + E +L D+ T +Y +PE R + +SD++
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIW 187
Query: 576 AFGVLLLELLTGKHPSQHPYLAPPDMLE 603
+ G+ L+E+ G++P + PPD E
Sbjct: 188 SMGLSLVEMAVGRYP-----IPPPDAKE 210
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 12/208 (5%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G+ G +K +V ++ + + ++ + + P +V F
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ GE + ++ GSL ++ + I + L K++ V +GL Y+ ++H
Sbjct: 136 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMH 190
Query: 517 GNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVY 575
++K SN+L+ + E +L D+ T +Y +PE R + +SD++
Sbjct: 191 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIW 249
Query: 576 AFGVLLLELLTGKHPSQHPYLAPPDMLE 603
+ G+ L+E+ G++P + PPD E
Sbjct: 250 SMGLSLVEMAVGRYP-----IPPPDAKE 272
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 12/208 (5%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G+ G +K +V ++ + + ++ + + P +V F
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ GE + ++ GSL ++ + I + L K++ V +GL Y+ ++H
Sbjct: 101 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMH 155
Query: 517 GNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVY 575
++K SN+L+ + E +L D+ T +Y +PE R + +SD++
Sbjct: 156 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIW 214
Query: 576 AFGVLLLELLTGKHPSQHPYLAPPDMLE 603
+ G+ L+E+ G++P + PPD E
Sbjct: 215 SMGLSLVEMAVGRYP-----IPPPDAKE 237
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 10/200 (5%)
Query: 395 ELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG G+ T YK + + V +K + T + A + + + L H N+V +
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIRE-ISLMKELKHENIVRLY 69
Query: 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP--LHWTSCLKIAEDVAQGLAYIHRA 511
+ + +++++ N SR++ P L + QGLA+ H
Sbjct: 70 DVIHTENKLTLVFEFMDND--LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN 127
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSRRA 568
++H +LK N+L+ + +L D+ T+ Y+AP++ SR
Sbjct: 128 K-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTY 186
Query: 569 TSKSDVYAFGVLLLELLTGK 588
++ D+++ G +L E++TGK
Sbjct: 187 STSIDIWSCGCILAEMITGK 206
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 397 LGRGSIGTTYKAVLDNHLIV--------TVKRFDANKTADTSAEAFEQHMEAVGGLSHPN 448
LG G+ G D HL+ +K + +++ E E +E + L HPN
Sbjct: 30 LGSGAFG-------DVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPN 81
Query: 449 LVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYI 508
++ I F+ ++ + G L I +++ R K L ++ + + LAY
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYF 140
Query: 509 HRASWLIHGNLKSSNVLL---GADFEARLTDY--CXXXXXXXXXXXXPDTVAYKAPEIRK 563
H + ++H +LK N+L ++ D+ T Y APE+ K
Sbjct: 141 H-SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK 199
Query: 564 SSRRATSKSDVYAFGVLLLELLTGKHP 590
R T K D+++ GV++ LLTG P
Sbjct: 200 --RDVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 112/287 (39%), Gaps = 57/287 (19%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E+ RG G +KA L N V VK F D + E + ++ G+ H N++
Sbjct: 30 EVKARGRFGCVWKAQLLNEY-VAVKIF---PIQDKQSWQNEYEVYSLPGMKHENILQFIG 85
Query: 455 YFQAKG-----ERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
+ +G + +I + GSL S ++A + W IAE +A+GLAY+H
Sbjct: 86 A-EKRGTSVDVDLWLITAFHEKGSL------SDFLKANVVSWNELCHIAETMARGLAYLH 138
Query: 510 ---------RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP-----DTVA 555
+ H ++KS NVLL + A + D+ T
Sbjct: 139 EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRR 198
Query: 556 YKAPEIRKSS----RRATSKSDVYAFGVLLLELLT----------------GKHPSQHPY 595
Y APE+ + + R A + D+YA G++L EL + + QHP
Sbjct: 199 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258
Query: 596 LAPPDMLEWV-----RTMRVDDGREENRLGMLTEVASVCSLKSPEQR 637
L DM E V R + D ++ + ML E C E R
Sbjct: 259 L--EDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEAR 303
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDXELKILDFGLARHT 180
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDXELKILDFGLARHT 180
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 128 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDXELKILDFGLARHT 186
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 415 IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474
+V +K D N T + + +EA+ L H ++ + + + ++ +Y P G L
Sbjct: 37 MVAIKIMDKN-TLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGEL 95
Query: 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARL 534
F+ I I L + + +AY+H + H +LK N+L + +L
Sbjct: 96 FDYI-----ISQDRLSEEETRVVFRQIVSAVAYVHSQGY-AHRDLKPENLLFDEYHKLKL 149
Query: 535 TDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
D+ T +AY APE+ + S++DV++ G+LL L+ G P
Sbjct: 150 IDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLP 209
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 28/216 (12%)
Query: 397 LGRGSIGTTYKAVLDN------HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
LG G+ G + A N ++V VK +D + + F + E + L H ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTL--KDASDNARKDFHREAELLTNLQHEHIV 78
Query: 451 PIRAYFQAKGERLVIYDYQPNGSL--FNLIHGSRSI---RAKP---LHWTSCLKIAEDVA 502
+++++Y +G L F HG ++ P L + L IA+ +A
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTD-------YCXXXXXXXXXXXXPDTVA 555
G+ Y+ + +H +L + N L+G + ++ D Y P +
Sbjct: 139 AGMVYL-ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP--IR 195
Query: 556 YKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHP 590
+ PE R+ T++SDV++ GV+L E+ T GK P
Sbjct: 196 WMPPE-SIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 11/198 (5%)
Query: 397 LGRGSIGTTYKAV-LDNHLIVTVKRFD-ANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
+G GS G Y A + N +V +K+ + K ++ + + + + L HPN + R
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
+ + ++ +Y GS +L+ + KPL + QGLAY+H + +
Sbjct: 122 CYLREHTAWLVMEYCL-GSASDLL----EVHKKPLQEVEIAAVTHGALQGLAYLHSHN-M 175
Query: 515 IHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEI--RKSSRRATSKS 572
IH ++K+ N+LL +L D+ T + APE+ + K
Sbjct: 176 IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-GTPYWMAPEVILAMDEGQYDGKV 234
Query: 573 DVYAFGVLLLELLTGKHP 590
DV++ G+ +EL K P
Sbjct: 235 DVWSLGITCIELAERKPP 252
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFYLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 119 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 177
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G+ G +K +V ++ + + ++ + + P +V F
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ GE + ++ GSL ++ + I + L K++ V +GL Y+ ++H
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMH 131
Query: 517 GNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVY 575
++K SN+L+ + E +L D+ T +Y +PE R + +SD++
Sbjct: 132 RDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPE-RLQGTHYSVQSDIW 190
Query: 576 AFGVLLLELLTGKHPSQHPYLAPPDMLEWV 605
+ G+ L+E+ G++P P +A ++L+++
Sbjct: 191 SMGLSLVEMAVGRYP--RPPMAIFELLDYI 218
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 137 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 195
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 196 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 182
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 180
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 140 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 198
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 199 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 395 ELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAE-AFEQHMEAVGGLSHPNLVPI 452
E+LG G + + A L H V VK A+ D S F + + L+HP +V +
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 453 RAYFQAKGER------LVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLA 506
Y + E ++ +Y +L +++H P+ +++ D Q L
Sbjct: 78 --YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALN 130
Query: 507 YIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA------YKAPE 560
+ H+ + +IH ++K +N+++ A ++ D+ T A Y +PE
Sbjct: 131 FSHQ-NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+ ++SDVY+ G +L E+LTG+ P
Sbjct: 190 QARGDS-VDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 180
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 116 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 174
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 175 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 182
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 128 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 186
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 136 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 194
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 195 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 123 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 181
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 119 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 177
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 182
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 22/174 (12%)
Query: 433 AFEQHMEAVGGLSHPNLVPIRAYFQAKGERLV--IYDYQPNGSLFNLIHGSRSIRAKPLH 490
+++ +E + L H ++V + + +GE+ V + +Y P GSL + + P H
Sbjct: 56 GWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---------PRH 106
Query: 491 WT---SCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXX----- 542
L A+ + +G+AY+H A IH L + NVLL D ++ D+
Sbjct: 107 CVGLAQLLLFAQQICEGMAYLH-AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH 165
Query: 543 -XXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY 595
V + APE K + + SDV++FGV L ELLT +Q P+
Sbjct: 166 EYYRVREDGDSPVFWYAPECLKECKFYYA-SDVWSFGVTLYELLTYCDSNQSPH 218
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 22/174 (12%)
Query: 433 AFEQHMEAVGGLSHPNLVPIRAYFQAKGERLV--IYDYQPNGSLFNLIHGSRSIRAKPLH 490
+++ +E + L H ++V + + +GE+ V + +Y P GSL + + P H
Sbjct: 57 GWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---------PRH 107
Query: 491 WT---SCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXX----- 542
L A+ + +G+AY+H A IH L + NVLL D ++ D+
Sbjct: 108 CVGLAQLLLFAQQICEGMAYLH-AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH 166
Query: 543 -XXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY 595
V + APE K + + SDV++FGV L ELLT +Q P+
Sbjct: 167 EYYRVREDGDSPVFWYAPECLKECKFYYA-SDVWSFGVTLYELLTYCDSNQSPH 219
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 136 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 194
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 195 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 119 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 177
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 137 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 195
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 196 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 129 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 187
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 127 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 185
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 186 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 115 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 173
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 174 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 129 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 187
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 182
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 183 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 129 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 187
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 118/289 (40%), Gaps = 47/289 (16%)
Query: 395 ELLGRGSIGTTYKAV--LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPI 452
EL+G G G +KA +D V ++R N E E+ ++A+ L H N+V
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYV-IRRVKYNN------EKAEREVKALAKLDHVNIVHY 70
Query: 453 RAYF-------QAKGERLVIYDYQPNGS----------LF---------NLIHGSRSIRA 486
+ + + L DY P S LF L R
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 487 KPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXXXXXX 544
+ L L++ E + +G+ YIH + LIH +LK SN+ L + ++ D+
Sbjct: 131 EKLDKVLALELFEQITKGVDYIH-SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 189
Query: 545 XXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
T+ Y +PE + SS+ + D+YA G++L ELL H + +
Sbjct: 190 GKRTRSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAELL---HVCDTAFETSKFFTD- 244
Query: 605 VRTMRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKES 653
+R + D ++ +L ++ S K PE RP ++L+ + K+S
Sbjct: 245 LRDGIISDIFDKKEKTLLQKLLS----KKPEDRPNTSEILRTLTVWKKS 289
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 176 DDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 123 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 181
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 113 VKCAKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 171
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 123 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 181
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 114 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 172
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 173 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 118/289 (40%), Gaps = 45/289 (15%)
Query: 397 LGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
LG G G KA + V VK N + + + + ++HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSE-FNVLKQVNHPHVI 89
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSI-------------------RAKPLHW 491
+ G L+I +Y GSL + SR + + L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 492 TSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP 551
+ A ++QG+ Y+ S L+H +L + N+L+ + +++D+
Sbjct: 150 GDLISFAWQISQGMQYLAEMS-LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVK 208
Query: 552 DT-----VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV 605
+ V + A E T++SDV++FGVLL E++T G +P +P + P + +
Sbjct: 209 RSQGRIPVKWMAIE-SLFDHIYTTQSDVWSFGVLLWEIVTLGGNP--YPGIPPERLFNLL 265
Query: 606 RT----MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650
+T R D+ EE ML C + P++RP + K ++++
Sbjct: 266 KTGHRMERPDNCSEEMYRLMLQ-----CWKQEPDKRPVFADISKDLEKM 309
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 114 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 172
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 173 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 176 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 113 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 171
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 11/198 (5%)
Query: 397 LGRGSIGTTYKAV-LDNHLIVTVKRFD-ANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
+G GS G Y A + N +V +K+ + K ++ + + + + L HPN + R
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
+ + ++ +Y GS +L+ + KPL + QGLAY+H + +
Sbjct: 83 CYLREHTAWLVMEY-CLGSASDLL----EVHKKPLQEVEIAAVTHGALQGLAYLHSHN-M 136
Query: 515 IHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEI--RKSSRRATSKS 572
IH ++K+ N+LL +L D+ T + APE+ + K
Sbjct: 137 IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-GTPYWMAPEVILAMDEGQYDGKV 195
Query: 573 DVYAFGVLLLELLTGKHP 590
DV++ G+ +EL K P
Sbjct: 196 DVWSLGITCIELAERKPP 213
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 113 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 171
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 140 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 198
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 199 DDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 137 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 195
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 196 DDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 17/223 (7%)
Query: 373 SLVFCAGESEVYSLEQLMRASAELLGRGSIGTTYKA-VLDNHLIVTVKRFDANKTADTS- 430
SL C GE +E LLG+GS Y+A + L V +K D
Sbjct: 1 SLATCIGEK----IEDF--KVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGM 54
Query: 431 AEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLH 490
+ + ++ L HP+++ + YF+ ++ + NG + + R KP
Sbjct: 55 VQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN----RVKPFS 110
Query: 491 WTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXX---XX 547
+ G+ Y+H + ++H +L SN+LL + ++ D+
Sbjct: 111 ENEARHFMHQIITGMLYLH-SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH 169
Query: 548 XXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
T Y +PEI S +SDV++ G + LL G+ P
Sbjct: 170 YTLCGTPNYISPEIATRSAHGL-ESDVWSLGCMFYTLLIGRPP 211
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 176 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 119 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDSELKILDFGLARHT 177
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 113 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHT 171
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 172 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 123 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDSELKILDFGLARHT 181
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 494 CLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXX 545
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D+
Sbjct: 148 CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 206
Query: 546 XXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 207 EMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 108/275 (39%), Gaps = 31/275 (11%)
Query: 397 LGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS-HPNL 449
LG G+ G +A D L V VK + AD EA ++ + L H N+
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK-EALMSELKIMSHLGQHENI 104
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIR-----AKPLHWTSCLKIAEDVAQG 504
V + G LVI +Y G L N + +PL L + VAQG
Sbjct: 105 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 164
Query: 505 LAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKAP 559
+A++ + IH ++ + NVLL A++ D+ V + AP
Sbjct: 165 MAFLASKN-CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 223
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMR-VDDGREENR 618
E T +SDV+++G+LL E+ + +PY P +L + + V DG + +
Sbjct: 224 ESIFDCVY-TVQSDVWSYGILLWEIFS---LGLNPY---PGILVNSKFYKLVKDGYQMAQ 276
Query: 619 LGM----LTEVASVCSLKSPEQRPAMWQVLKMIQE 649
+ + C P RP Q+ +QE
Sbjct: 277 PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 311
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 48/283 (16%)
Query: 395 ELLGRGSIGTTYKAV--LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPI 452
EL+G G G +KA +D V +KR N E E+ ++A+ L H N+V
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYV-IKRVKYNN------EKAEREVKALAKLDHVNIVHY 69
Query: 453 RAYFQAKGERLVIYDYQPNGSLFN--------------------LIHGSRSIRAKPLHWT 492
+ +DY P S N L R + L
Sbjct: 70 NGCWDG-------FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 493 SCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXXXXXXXXXXXX 550
L++ E + +G+ YIH + LI+ +LK SN+ L + ++ D+
Sbjct: 123 LALELFEQITKGVDYIH-SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS 181
Query: 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRV 610
T+ Y +PE + SS+ + D+YA G++L ELL H + + +R +
Sbjct: 182 KGTLRYMSPE-QISSQDYGKEVDLYALGLILAELL---HVCDTAFETSKFFTD-LRDGII 236
Query: 611 DDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKES 653
D ++ +L ++ S K PE RP ++L+ + K+S
Sbjct: 237 SDIFDKKEKTLLQKLLS----KKPEDRPNTSEILRTLTVWKKS 275
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 395 ELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAE-AFEQHMEAVGGLSHPNLVPI 452
E+LG G + + A L H V VK A+ D S F + + L+HP +V +
Sbjct: 35 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 94
Query: 453 RAYFQAKGER------LVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLA 506
Y + E ++ +Y +L +++H P+ +++ D Q L
Sbjct: 95 --YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALN 147
Query: 507 YIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA------YKAPE 560
+ H+ + +IH ++K +N+++ A ++ D+ T A Y +PE
Sbjct: 148 FSHQ-NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 206
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+ ++SDVY+ G +L E+LTG+ P
Sbjct: 207 QARGDS-VDARSDVYSLGCVLYEVLTGEPP 235
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 26/217 (11%)
Query: 395 ELLGRGSIGTTYKAVLDNHLI-VTVKRFDANKTADTSAEAFEQHMEA----------VGG 443
E+LGRG + + VK D SAE ++ EA V G
Sbjct: 10 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 69
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
HPN++ ++ ++ +++D G LF+ + ++ K KI + +
Sbjct: 70 --HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-----KIMRALLE 122
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXX--XXXXXXPDTVAYKAPEI 561
+ +H+ + ++H +LK N+LL D +LTD+ T +Y APEI
Sbjct: 123 VICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 181
Query: 562 RKSSRRAT-----SKSDVYAFGVLLLELLTGKHPSQH 593
+ S + D+++ GV++ LL G P H
Sbjct: 182 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 218
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIR 562
+GL YIH A +IH +LK SNV + D E R+ D+ T Y+APEI
Sbjct: 134 RGLKYIHSAG-IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIM 192
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGK 588
+ D+++ G ++ ELL GK
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HP+++ + +++ +++D G LF+ + ++ K I + + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEK-----ETRSIMRSLLEAV 213
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEARLTDY---CXXXXXXXXXXXXPDTVAYKAPEIR 562
+++H A+ ++H +LK N+LL + + RL+D+ C T Y APEI
Sbjct: 214 SFLH-ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELC-GTPGYLAPEIL 271
Query: 563 KSSRRAT-----SKSDVYAFGVLLLELLTGKHPSQH 593
K S T + D++A GV+L LL G P H
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIR 562
+GL YIH A +IH +LK SNV + D E R+ D+ T Y+APEI
Sbjct: 142 RGLKYIHSAG-IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIM 200
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGK 588
+ D+++ G ++ ELL GK
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 13/174 (7%)
Query: 422 DANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGS 481
D NK + E + + L HPN++ + F+ K ++ ++ G LF I
Sbjct: 81 DDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI--- 137
Query: 482 RSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYC 538
I I + + G+ Y+H+ + ++H ++K N+LL + ++ D+
Sbjct: 138 --INRHKFDECDAANIMKQILSGICYLHKHN-IVHRDIKPENILLENKNSLLNIKIVDFG 194
Query: 539 XXXXXXXXXXXXP--DTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
T Y APE+ K ++ K DV++ GV++ LL G P
Sbjct: 195 LSSFFSKDYKLRDRLGTAYYIAPEVLK--KKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIR 562
+GL YIH A +IH +LK SNV + D E R+ D+ T Y+APEI
Sbjct: 142 RGLKYIHSAG-IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIM 200
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGK 588
+ D+++ G ++ ELL GK
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
L HPN++ + +F+ K ++ + G LF+ I I + I + V
Sbjct: 93 LDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI-----IHRMKFNEVDAAVIIKQVLS 147
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGA---DFEARLTDYCXXXXXXXXXXXXP--DTVAYKA 558
G+ Y+H+ + ++H +LK N+LL + D ++ D+ T Y A
Sbjct: 148 GVTYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIA 206
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
PE+ + ++ K DV++ GV+L LL G P
Sbjct: 207 PEVLR--KKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 20/208 (9%)
Query: 394 AELLGRGSIGTT----YKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
+++GRG+ G +KA + + + +F+ K +D++ F + + + + P +
Sbjct: 80 VKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAFANSPWV 137
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + FQ ++ +Y P G L NL+ +T+ + +A D + IH
Sbjct: 138 VQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIH 197
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA----YKAPEIRKS- 564
R ++K N+LL +L D+ DT Y +PE+ KS
Sbjct: 198 R-------DVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQ 250
Query: 565 --SRRATSKSDVYAFGVLLLELLTGKHP 590
+ D ++ GV L E+L G P
Sbjct: 251 GGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 18/207 (8%)
Query: 395 ELLGRGSIGTTYKAVLD----NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+++G G G L + V +K A T D F +G HPN++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYT-DKQRRDFLSEASIMGQFDHPNII 72
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ ++I +Y NGSL + + R + L+ + G+ Y+
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-RFTVIQLVGMLR---GIGSGMKYLSD 128
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIRKSS----- 565
S+ +H +L + N+L+ ++ +++D+ T K P IR ++
Sbjct: 129 MSY-VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP-IRWTAPEAIA 186
Query: 566 -RRATSKSDVYAFGVLLLELLT-GKHP 590
R+ TS SDV+++G+++ E+++ G+ P
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 108/275 (39%), Gaps = 31/275 (11%)
Query: 397 LGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS-HPNL 449
LG G+ G +A D L V VK + AD EA ++ + L H N+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK-EALMSELKIMSHLGQHENI 112
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIR-----AKPLHWTSCLKIAEDVAQG 504
V + G LVI +Y G L N + +PL L + VAQG
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 172
Query: 505 LAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKAP 559
+A++ + IH ++ + NVLL A++ D+ V + AP
Sbjct: 173 MAFLASKN-CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 231
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMR-VDDGREENR 618
E T +SDV+++G+LL E+ + +PY P +L + + V DG + +
Sbjct: 232 ESIFDCVY-TVQSDVWSYGILLWEIFS---LGLNPY---PGILVNSKFYKLVKDGYQMAQ 284
Query: 619 LGM----LTEVASVCSLKSPEQRPAMWQVLKMIQE 649
+ + C P RP Q+ +QE
Sbjct: 285 PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 319
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 20/208 (9%)
Query: 394 AELLGRGSIGTT----YKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
+++GRG+ G +K+ + + + +F+ K +D++ F + + + + P +
Sbjct: 79 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAFANSPWV 136
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + FQ ++ +Y P G L NL+ +T+ + +A D + +IH
Sbjct: 137 VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH 196
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA----YKAPEIRKS- 564
R ++K N+LL +L D+ DT Y +PE+ KS
Sbjct: 197 R-------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 249
Query: 565 --SRRATSKSDVYAFGVLLLELLTGKHP 590
+ D ++ GV L E+L G P
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 20/208 (9%)
Query: 394 AELLGRGSIGTT----YKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
+++GRG+ G +K+ + + + +F+ K +D++ F + + + + P +
Sbjct: 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAFANSPWV 131
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + FQ ++ +Y P G L NL+ +T+ + +A D + +IH
Sbjct: 132 VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH 191
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA----YKAPEIRKS- 564
R ++K N+LL +L D+ DT Y +PE+ KS
Sbjct: 192 R-------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 244
Query: 565 --SRRATSKSDVYAFGVLLLELLTGKHP 590
+ D ++ GV L E+L G P
Sbjct: 245 GGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 20/208 (9%)
Query: 394 AELLGRGSIGTT----YKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
+++GRG+ G +K+ + + + +F+ K +D++ F + + + + P +
Sbjct: 79 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAFANSPWV 136
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + FQ ++ +Y P G L NL+ +T+ + +A D + +IH
Sbjct: 137 VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH 196
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA----YKAPEIRKS- 564
R ++K N+LL +L D+ DT Y +PE+ KS
Sbjct: 197 R-------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 249
Query: 565 --SRRATSKSDVYAFGVLLLELLTGKHP 590
+ D ++ GV L E+L G P
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPE 560
+ +GL YIH A +IH +LK SN+ + D E ++ D+ T Y+APE
Sbjct: 134 ILRGLKYIHSAD-IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGK 588
I + D+++ G ++ ELLTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 18/207 (8%)
Query: 395 ELLGRGSIGTTYKAVLD----NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+++G G G L + V +K A T D F +G HPN++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYT-DKQRRDFLSEASIMGQFDHPNII 78
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ ++I +Y NGSL + + R + L+ + G+ Y+
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-RFTVIQLVGMLR---GIGSGMKYLSD 134
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIRKSS----- 565
S+ +H +L + N+L+ ++ +++D+ T K P IR ++
Sbjct: 135 MSY-VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP-IRWTAPEAIA 192
Query: 566 -RRATSKSDVYAFGVLLLELLT-GKHP 590
R+ TS SDV+++G+++ E+++ G+ P
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 19/188 (10%)
Query: 416 VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLF 475
VTV+R + ++ + + +HPN+VP RA F A E V+ + GS
Sbjct: 55 VTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAK 114
Query: 476 NLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEAR 533
+LI H + + + I + V + L YIH + +H ++K+S++L+ D +
Sbjct: 115 DLICTHFMDGMNELAIAY-----ILQGVLKALDYIHHMGY-VHRSVKASHILISVDGKVY 168
Query: 534 LT------DYCXXXXXXXXXXXXPD----TVAYKAPEIRKSSRRA-TSKSDVYAFGVLLL 582
L+ P + + +PE+ + + + +KSD+Y+ G+
Sbjct: 169 LSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC 228
Query: 583 ELLTGKHP 590
EL G P
Sbjct: 229 ELANGHVP 236
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 19/188 (10%)
Query: 416 VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLF 475
VTV+R + ++ + + +HPN+VP RA F A E V+ + GS
Sbjct: 39 VTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAK 98
Query: 476 NLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEAR 533
+LI H + + + I + V + L YIH + +H ++K+S++L+ D +
Sbjct: 99 DLICTHFMDGMNELAIAY-----ILQGVLKALDYIHHMGY-VHRSVKASHILISVDGKVY 152
Query: 534 LT------DYCXXXXXXXXXXXXPD----TVAYKAPEIRKSSRRA-TSKSDVYAFGVLLL 582
L+ P + + +PE+ + + + +KSD+Y+ G+
Sbjct: 153 LSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC 212
Query: 583 ELLTGKHP 590
EL G P
Sbjct: 213 ELANGHVP 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPE 560
+ +GL YIH A +IH +LK SN+ + D E ++ D+ T Y+APE
Sbjct: 134 ILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPE 192
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGK 588
I + D+++ G ++ ELLTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 26/217 (11%)
Query: 395 ELLGRGSIGTTYKAVLDNHLI-VTVKRFDANKTADTSAEAFEQHMEA----------VGG 443
E+LGRG + + VK D SAE ++ EA V G
Sbjct: 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 82
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
HPN++ ++ ++ +++D G LF+ + ++ K KI + +
Sbjct: 83 --HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-----KIMRALLE 135
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXX--XXXXXXPDTVAYKAPEI 561
+ +H+ + ++H +LK N+LL D +LTD+ T +Y APEI
Sbjct: 136 VICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEI 194
Query: 562 RKSSRRAT-----SKSDVYAFGVLLLELLTGKHPSQH 593
+ S + D+++ GV++ LL G P H
Sbjct: 195 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 10/197 (5%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
L+G GS G K D IV +K+F + + + ++ + L H NLV +
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
+ K +++++ + L +L + L + K + G+ + H + +
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDL-----ELFPNGLDYQVVQKYLFQIINGIGFCHSHN-I 145
Query: 515 IHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATSK 571
IH ++K N+L+ +L D+ D VA Y+APE+ +
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKA 205
Query: 572 SDVYAFGVLLLELLTGK 588
DV+A G L+ E+ G+
Sbjct: 206 VDVWAIGCLVTEMFMGE 222
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 26/217 (11%)
Query: 395 ELLGRGSIGTTYKAVLDNHLI-VTVKRFDANKTADTSAEAFEQHMEA----------VGG 443
E+LGRG + + VK D SAE ++ EA V G
Sbjct: 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 82
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
HPN++ ++ ++ +++D G LF+ + ++ K KI + +
Sbjct: 83 --HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-----KIMRALLE 135
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXX--XXXXXXPDTVAYKAPEI 561
+ +H+ + ++H +LK N+LL D +LTD+ T +Y APEI
Sbjct: 136 VICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 194
Query: 562 RKSSRRAT-----SKSDVYAFGVLLLELLTGKHPSQH 593
+ S + D+++ GV++ LL G P H
Sbjct: 195 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 116/289 (40%), Gaps = 45/289 (15%)
Query: 397 LGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
LG G G KA + V VK N + + + + ++HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSE-FNVLKQVNHPHVI 89
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSI-------------------RAKPLHW 491
+ G L+I +Y GSL + SR + + L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 492 TSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP 551
+ A ++QG+ Y+ L+H +L + N+L+ + +++D+
Sbjct: 150 GDLISFAWQISQGMQYLAEMK-LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVK 208
Query: 552 DT-----VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV 605
+ V + A E T++SDV++FGVLL E++T G +P +P + P + +
Sbjct: 209 RSQGRIPVKWMAIE-SLFDHIYTTQSDVWSFGVLLWEIVTLGGNP--YPGIPPERLFNLL 265
Query: 606 RT----MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650
+T R D+ EE ML C + P++RP + K ++++
Sbjct: 266 KTGHRMERPDNCSEEMYRLMLQ-----CWKQEPDKRPVFADISKDLEKM 309
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 117/289 (40%), Gaps = 45/289 (15%)
Query: 397 LGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
LG G G KA + V VK N + + + + ++HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSE-FNVLKQVNHPHVI 89
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSI-------------------RAKPLHW 491
+ G L+I +Y GSL + SR + + L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 492 TSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP 551
+ A ++QG+ Y+ L+H +L + N+L+ + +++D+
Sbjct: 150 GDLISFAWQISQGMQYLAEMK-LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVK 208
Query: 552 DT-----VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWV 605
+ V + A E T++SDV++FGVLL E++T G +P +P + P + +
Sbjct: 209 RSQGRIPVKWMAIE-SLFDHIYTTQSDVWSFGVLLWEIVTLGGNP--YPGIPPERLFNLL 265
Query: 606 RT----MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650
+T R D+ EE ML C + P++RP + K ++++
Sbjct: 266 KTGHRMERPDNCSEEMYRLMLQ-----CWKQEPDKRPVFADISKDLEKM 309
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G+ G +K +V ++ + + ++ + + P +V F
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ GE + ++ GSL ++ + I + L K++ V +GL Y+ ++H
Sbjct: 93 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMH 147
Query: 517 GNLKSSNVLLGADFEARLTDY-CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVY 575
++K SN+L+ + E +L D+ T +Y +PE R + +SD++
Sbjct: 148 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-RLQGTHYSVQSDIW 206
Query: 576 AFGVLLLELLTGKHP--SQHPYLAPPDMLEWV 605
+ G+ L+E+ G++P S +A ++L+++
Sbjct: 207 SMGLSLVEMAVGRYPIGSGSGSMAIFELLDYI 238
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 113/274 (41%), Gaps = 40/274 (14%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS----HPNLV 450
EL+G G+ G YK H V + A K D + + E+ + + L H N+
Sbjct: 30 ELVGNGTYGQVYKG---RH--VKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIA 84
Query: 451 PIRAYFQAKG------ERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQG 504
F K + ++ ++ GS+ +LI ++ K W + I ++ +G
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE-EWIAY--ICREILRG 141
Query: 505 LAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEI 561
L+++H+ +IH ++K NVLL + E +L D+ + + APE+
Sbjct: 142 LSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEV 200
Query: 562 RKSSRRATS----KSDVYAFGVLLLELLTGK------HPSQHPYLAPPDMLEWVRTMRVD 611
+ KSD+++ G+ +E+ G HP + +L P + R+
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN-----PAPRLK 255
Query: 612 DGREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645
+ + E C +K+ QRPA Q++K
Sbjct: 256 SKKWSKKFQSFIE---SCLVKNHSQRPATEQLMK 286
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 395 ELLGRGSIGTTYKAVLD----NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+++G G G L + V +K A T D F +G HPN++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYT-DKQRRDFLSEASIMGQFDHPNII 93
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ ++I +Y NGSL + + R + L+ + G+ Y+
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-RFTVIQLVGMLR---GIGSGMKYLSD 149
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIRKSS----- 565
S +H +L + N+L+ ++ +++D+ T K P IR ++
Sbjct: 150 MS-AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP-IRWTAPEAIA 207
Query: 566 -RRATSKSDVYAFGVLLLELLT-GKHP 590
R+ TS SDV+++G+++ E+++ G+ P
Sbjct: 208 YRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDRGLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 31/211 (14%)
Query: 395 ELLGRGSIGTTYKAVLDN----HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
++LG+GS G + A I +K+ D E+ + ++ HP L
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEHPFLT 82
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI--------AEDVA 502
+ FQ K + +Y G L H SC K A ++
Sbjct: 83 HMFCTFQTKENLFFVMEYLNGGDLM-------------YHIQSCHKFDLSRATFYAAEII 129
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAP 559
GL ++H +++ +LK N+LL D ++ D+ + T Y AP
Sbjct: 130 LGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAP 188
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
EI + S D ++FGVLL E+L G+ P
Sbjct: 189 EILLGQKYNHS-VDWWSFGVLLYEMLIGQSP 218
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDAGLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPE 560
+ +GL YIH A +IH +LK SN+ + D E ++ D+ T Y+APE
Sbjct: 134 ILRGLKYIHSAD-IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPE 192
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGK 588
I + D+++ G ++ ELLTG+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 23/213 (10%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADT-SAEAFEQHMEAVGGLS---HPNLVPI 452
LG G+ G YKA ++ A K DT S E E +M + L+ HPN+V +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLA-----AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL 99
Query: 453 RAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
F + ++ ++ G++ ++ +PL + + + L Y+H
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELE----RPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEI----RKSS 565
+IH +LK+ N+L D + +L D+ + + APE+
Sbjct: 156 -IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP 598
R K+DV++ G+ L+E+ + P H L P
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPP--HHELNP 245
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 123/297 (41%), Gaps = 32/297 (10%)
Query: 375 VFCAGESEVYSLEQLMRASAEL---LGRGSIGTTYKAVLDNH------LIVTVKRFDANK 425
F S + L+++ R + L LG G+ G Y+ + L V VK
Sbjct: 28 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---P 84
Query: 426 TADTSAEAFEQHMEA--VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRS 483
+ + + MEA + L+H N+V R ++ + G L + + +R
Sbjct: 85 EVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 144
Query: 484 IRAKP--LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYC 538
++P L L +A D+A G Y+ + IH ++ + N LL G A++ D+
Sbjct: 145 RPSQPSSLAMLDLLHVARDIACGCQYLEE-NHFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 539 XXXXXXXXXXXXPDTVA-----YKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
A + PE TSK+D ++FGVLL E+ + G P
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP-- 260
Query: 593 HPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ 648
+P + ++LE+V + R+D + N G + + + C PE RP +L+ I+
Sbjct: 261 YPSKSNQEVLEFVTSGGRMDPPK--NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIR 562
+GL YIH A+ +IH +LK N+ + D E ++ D+ T Y+APE+
Sbjct: 139 KGLRYIH-AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVI 197
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGK 588
+ R T D+++ G ++ E++TGK
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 123/296 (41%), Gaps = 32/296 (10%)
Query: 376 FCAGESEVYSLEQLMRASAEL---LGRGSIGTTYKAVLDNH------LIVTVKRFDANKT 426
F S + L+++ R + L LG G+ G Y+ + L V VK
Sbjct: 15 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PE 71
Query: 427 ADTSAEAFEQHMEA--VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSI 484
+ + + MEA + L+H N+V R ++ + G L + + +R
Sbjct: 72 VCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131
Query: 485 RAKP--LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYCX 539
++P L L +A D+A G Y+ + IH ++ + N LL G A++ D+
Sbjct: 132 PSQPSSLAMLDLLHVARDIACGCQYLEE-NHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 540 XXXXXXXXXXXPDTVA-----YKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQH 593
A + PE TSK+D ++FGVLL E+ + G P +
Sbjct: 191 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP--Y 247
Query: 594 PYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ 648
P + ++LE+V + R+D + N G + + + C PE RP +L+ I+
Sbjct: 248 PSKSNQEVLEFVTSGGRMDPPK--NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 23/213 (10%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADT-SAEAFEQHMEAVGGLS---HPNLVPI 452
LG G+ G YKA ++ A K DT S E E +M + L+ HPN+V +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLA-----AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL 99
Query: 453 RAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
F + ++ ++ G++ ++ +PL + + + L Y+H
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELE----RPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEI----RKSS 565
+IH +LK+ N+L D + +L D+ + + APE+
Sbjct: 156 -IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP 598
R K+DV++ G+ L+E+ + P H L P
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPP--HHELNP 245
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ D
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDGGLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 31/211 (14%)
Query: 395 ELLGRGSIGTTYKAVLDN----HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
++LG+GS G + A I +K+ D E+ + ++ HP L
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEHPFLT 81
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI--------AEDVA 502
+ FQ K + +Y G L H SC K A ++
Sbjct: 82 HMFCTFQTKENLFFVMEYLNGGDLM-------------YHIQSCHKFDLSRATFYAAEII 128
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXXXXX-XXXXXXXPDTVAYKAP 559
GL ++H +++ +LK N+LL D ++ D+ C T Y AP
Sbjct: 129 LGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAP 187
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
EI + S D ++FGVLL E+L G+ P
Sbjct: 188 EILLGQKYNHS-VDWWSFGVLLYEMLIGQSP 217
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
L G +K + IV VK + + F + + SHPN++P+
Sbjct: 18 LNENHSGELWKGRWQGNDIV-VKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 457 QA--KGERLVIYDYQPNGSLFNLIH-GSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
Q+ +I + P GSL+N++H G+ + + + +K A D A+G A++H
Sbjct: 77 QSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQ----SQAVKFALDXARGXAFLHTLEP 132
Query: 514 LI-HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK- 571
LI L S +V + D AR++ A+ APE + T++
Sbjct: 133 LIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXY--APAWVAPEALQKKPEDTNRR 190
Query: 572 -SDVYAFGVLLLELLTGKHP 590
+D ++F VLL EL+T + P
Sbjct: 191 SADXWSFAVLLWELVTREVP 210
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 23/217 (10%)
Query: 396 LLGRGSIGTTYKAVL---DNHLI-VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPN--- 448
+LG+G G+ +A L D + V VK A+ A + E F + + HP+
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 449 LVPIRAYFQAKGER---LVIYDYQPNGSLFNLIHGSRSIRAKPLHW--TSCLKIAEDVAQ 503
LV + +AKG +VI + +G L + SR I P + + ++ D+A
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR-IGENPFNLPLQTLVRFMVDIAC 148
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKA 558
G+ Y+ ++ IH +L + N +L D + D+ V + A
Sbjct: 149 GMEYLSSRNF-IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY 595
E + T SDV+AFGV + E++T Q PY
Sbjct: 208 LE-SLADNLYTVHSDVWAFGVTMWEIMT---RGQTPY 240
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 23/213 (10%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADT-SAEAFEQHMEAVGGLS---HPNLVPI 452
LG G+ G YKA ++ A K DT S E E +M + L+ HPN+V +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLA-----AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL 99
Query: 453 RAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
F + ++ ++ G++ ++ +PL + + + L Y+H
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELE----RPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEI----RKSS 565
+IH +LK+ N+L D + +L D+ + + APE+
Sbjct: 156 -IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKD 214
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP 598
R K+DV++ G+ L+E+ + P H L P
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPP--HHELNP 245
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 109/288 (37%), Gaps = 44/288 (15%)
Query: 397 LGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS-HPNL 449
LG G+ G +A D L V VK + AD EA ++ + L H N+
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK-EALMSELKIMSHLGQHENI 97
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLI------------------HGSRSIRAKPLHW 491
V + G LVI +Y G L N + G +PL
Sbjct: 98 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLEL 157
Query: 492 TSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP 551
L + VAQG+A++ + IH ++ + NVLL A++ D+
Sbjct: 158 RDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 216
Query: 552 DT-----VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVR 606
V + APE T +SDV+++G+LL E+ + +PY P +L +
Sbjct: 217 KGNARLPVKWMAPESIFDCVY-TVQSDVWSYGILLWEIFS---LGLNPY---PGILVNSK 269
Query: 607 TMR-VDDGREENRLGM----LTEVASVCSLKSPEQRPAMWQVLKMIQE 649
+ V DG + + + + C P RP Q+ +QE
Sbjct: 270 FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 317
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HP+++ + + ++ +Y G LF+ I + + K ++ + + G+
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEK-----ESRRLFQQILSGV 129
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRK 563
Y HR ++H +LK NVLL A A++ D+ + Y APE+
Sbjct: 130 DYCHR-HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVIS 188
Query: 564 SSRRATSKSDVYAFGVLLLELLTGKHP 590
A + D+++ GV+L LL G P
Sbjct: 189 GRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 492 TSCLKIAEDVAQ--------GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXX 543
C K+ +D Q GL YIH A +IH +LK SN+ + D E ++ +
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILGFGLARHT 175
Query: 544 XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
T Y+APEI + D+++ G ++ ELLTG+
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 441 VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT--SCLKIA 498
+G HPN++ + +++ +Y NGSL + +R +T + +
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF------LRKHDAQFTVIQLVGML 124
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKA 558
+A G+ Y+ + +H +L + N+L+ ++ +++D+ T K
Sbjct: 125 RGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 559 PEIRKSS------RRATSKSDVYAFGVLLLELLT-GKHP 590
P IR +S R+ TS SDV+++G++L E+++ G+ P
Sbjct: 184 P-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 441 VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT--SCLKIA 498
+G HPN++ + +++ +Y NGSL + +R +T + +
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF------LRKHDAQFTVIQLVGML 141
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKA 558
+A G+ Y+ + +H +L + N+L+ ++ +++D+ T K
Sbjct: 142 RGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 200
Query: 559 PEIRKSS------RRATSKSDVYAFGVLLLELLT-GKHP 590
P IR +S R+ TS SDV+++G++L E+++ G+ P
Sbjct: 201 P-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 92/223 (41%), Gaps = 15/223 (6%)
Query: 378 AGESEVYSLEQLMRASAELLGRGSIGTTYKAVL---DNHLIVTVKRFDANKTADTSAEAF 434
+G + Y +++ +G G G ++ + +N + + N T+D+ E F
Sbjct: 2 SGSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF 61
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSC 494
Q + HP++V + + +I + G L + + +R L S
Sbjct: 62 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASL 116
Query: 495 LKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT- 553
+ A ++ LAY+ +H ++ + NVL+ ++ +L D+
Sbjct: 117 ILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 175
Query: 554 ---VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
+ + APE + RR TS SDV+ FGV + E+L G P Q
Sbjct: 176 KLPIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 217
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 122/296 (41%), Gaps = 32/296 (10%)
Query: 376 FCAGESEVYSLEQLMRASAEL---LGRGSIGTTYKAVLDNH------LIVTVKRFDANKT 426
F S + L+++ R + L LG G+ G Y+ + L V VK
Sbjct: 15 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PE 71
Query: 427 ADTSAEAFEQHMEA--VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSI 484
+ + + MEA + +H N+V R ++ + G L + + +R
Sbjct: 72 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131
Query: 485 RAKP--LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYCX 539
++P L L +A D+A G Y+ + IH ++ + N LL G A++ D+
Sbjct: 132 PSQPSSLAMLDLLHVARDIACGCQYLEE-NHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 540 XXXXXXXXXXXPDTVA-----YKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQH 593
A + PE TSK+D ++FGVLL E+ + G P +
Sbjct: 191 AQDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP--Y 247
Query: 594 PYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ 648
P + ++LE+V + R+D + N G + + + C PE RP +L+ I+
Sbjct: 248 PSKSNQEVLEFVTSGGRMDPPK--NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 25/217 (11%)
Query: 395 ELLGR-GSIGTTYKAVLDNHLIVTVKRFDANKTADT-SAEAFEQHM---EAVGGLSHPNL 449
E++G G G YKA ++ A K DT S E E +M + + HPN+
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLA-----AAKVIDTKSEEELEDYMVEIDILASCDHPNI 69
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + F + ++ ++ G++ ++ +PL + + + L Y+H
Sbjct: 70 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELE----RPLTESQIQVVCKQTLDALNYLH 125
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD----TVAYKAPEI---- 561
+IH +LK+ N+L D + +L D+ D T + APE+
Sbjct: 126 DNK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCE 184
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP 598
R K+DV++ G+ L+E+ + P H L P
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEMAEIEPP--HHELNP 219
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 122/297 (41%), Gaps = 32/297 (10%)
Query: 375 VFCAGESEVYSLEQLMRASAEL---LGRGSIGTTYKAVLDNH------LIVTVKRFDANK 425
F S + L+++ R + L LG G+ G Y+ + L V VK
Sbjct: 28 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---P 84
Query: 426 TADTSAEAFEQHMEA--VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRS 483
+ + + MEA + +H N+V R ++ + G L + + +R
Sbjct: 85 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRP 144
Query: 484 IRAKP--LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYC 538
++P L L +A D+A G Y+ + IH ++ + N LL G A++ D+
Sbjct: 145 RPSQPSSLAMLDLLHVARDIACGCQYLEE-NHFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 539 XXXXXXXXXXXXPDTVA-----YKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
A + PE TSK+D ++FGVLL E+ + G P
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP-- 260
Query: 593 HPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ 648
+P + ++LE+V + R+D + N G + + + C PE RP +L+ I+
Sbjct: 261 YPSKSNQEVLEFVTSGGRMDPPK--NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 441 VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT--SCLKIA 498
+G HPN++ + +++ +Y NGSL + +R +T + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF------LRKHDAQFTVIQLVGML 153
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKA 558
+A G+ Y+ + +H +L + N+L+ ++ +++D+ T K
Sbjct: 154 RGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI 212
Query: 559 PEIRKSS------RRATSKSDVYAFGVLLLELLT-GKHP 590
P IR +S R+ TS SDV+++G++L E+++ G+ P
Sbjct: 213 P-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 441 VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT--SCLKIA 498
+G HPN++ + +++ +Y NGSL + +R +T + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF------LRKHDAQFTVIQLVGML 153
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKA 558
+A G+ Y+ + +H +L + N+L+ ++ +++D+ T K
Sbjct: 154 RGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 559 PEIRKSS------RRATSKSDVYAFGVLLLELLT-GKHP 590
P IR +S R+ TS SDV+++G++L E+++ G+ P
Sbjct: 213 P-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 20/199 (10%)
Query: 415 IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGER--LVIYDYQPNG 472
+V VK A+ + ++Q ++ + L H +++ + + G ++ +Y P G
Sbjct: 62 MVAVKALKADAGPQHRS-GWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLG 120
Query: 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEA 532
SL + + SI L L A+ + +G+AY+H A IH +L + NVLL D
Sbjct: 121 SLRDYL-PRHSIGLAQL-----LLFAQQICEGMAYLH-AQHYIHRDLAARNVLLDNDRLV 173
Query: 533 RLTDYCXXXXX------XXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT 586
++ D+ V + APE K + + SDV++FGV L ELLT
Sbjct: 174 KIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYA-SDVWSFGVTLYELLT 232
Query: 587 GKHPSQHPYLAPPDMLEWV 605
SQ P P LE +
Sbjct: 233 HCDSSQSP---PTKFLELI 248
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 122/297 (41%), Gaps = 32/297 (10%)
Query: 375 VFCAGESEVYSLEQLMRASAEL---LGRGSIGTTYKAVLDNH------LIVTVKRFDANK 425
F S + L+++ R + L LG G+ G Y+ + L V VK
Sbjct: 13 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---P 69
Query: 426 TADTSAEAFEQHMEA--VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRS 483
+ + + MEA + +H N+V R ++ + G L + + +R
Sbjct: 70 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRP 129
Query: 484 IRAKP--LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYC 538
++P L L +A D+A G Y+ + IH ++ + N LL G A++ D+
Sbjct: 130 RPSQPSSLAMLDLLHVARDIACGCQYLEE-NHFIHRDIAARNCLLTCPGPGRVAKIGDFG 188
Query: 539 XXXXXXXXXXXXPDTVA-----YKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
A + PE TSK+D ++FGVLL E+ + G P
Sbjct: 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP-- 245
Query: 593 HPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ 648
+P + ++LE+V + R+D + N G + + + C PE RP +L+ I+
Sbjct: 246 YPSKSNQEVLEFVTSGGRMDPPK--NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 441 VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT--SCLKIA 498
+G HPN++ + +++ +Y NGSL + +R +T + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF------LRKHDAQFTVIQLVGML 153
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKA 558
+A G+ Y+ + +H +L + N+L+ ++ +++D+ T K
Sbjct: 154 RGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 559 PEIRKSS------RRATSKSDVYAFGVLLLELLT-GKHP 590
P IR +S R+ TS SDV+++G++L E+++ G+ P
Sbjct: 213 P-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 441 VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT--SCLKIA 498
+G HPN++ + +++ +Y NGSL + +R +T + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF------LRKHDAQFTVIQLVGML 153
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKA 558
+A G+ Y+ + +H +L + N+L+ ++ +++D+ T K
Sbjct: 154 RGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 559 PEIRKSS------RRATSKSDVYAFGVLLLELLT-GKHP 590
P IR +S R+ TS SDV+++G++L E+++ G+ P
Sbjct: 213 P-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 122/297 (41%), Gaps = 32/297 (10%)
Query: 375 VFCAGESEVYSLEQLMRASAEL---LGRGSIGTTYKAVLDNH------LIVTVKRFDANK 425
F S + L+++ R + L LG G+ G Y+ + L V VK
Sbjct: 28 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---P 84
Query: 426 TADTSAEAFEQHMEA--VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRS 483
+ + + MEA + +H N+V R ++ + G L + + +R
Sbjct: 85 EVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 144
Query: 484 IRAKP--LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYC 538
++P L L +A D+A G Y+ + IH ++ + N LL G A++ D+
Sbjct: 145 RPSQPSSLAMLDLLHVARDIACGCQYLEE-NHFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 539 XXXXXXXXXXXXPDTVA-----YKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
A + PE TSK+D ++FGVLL E+ + G P
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP-- 260
Query: 593 HPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ 648
+P + ++LE+V + R+D + N G + + + C PE RP +L+ I+
Sbjct: 261 YPSKSNQEVLEFVTSGGRMDPPK--NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 122/296 (41%), Gaps = 32/296 (10%)
Query: 376 FCAGESEVYSLEQLMRASAEL---LGRGSIGTTYKAVLDNH------LIVTVKRFDANKT 426
F S + L+++ R + L LG G+ G Y+ + L V VK
Sbjct: 15 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PE 71
Query: 427 ADTSAEAFEQHMEA--VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSI 484
+ + + MEA + +H N+V R ++ + G L + + +R
Sbjct: 72 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131
Query: 485 RAKP--LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYCX 539
++P L L +A D+A G Y+ + IH ++ + N LL G A++ D+
Sbjct: 132 PSQPSSLAMLDLLHVARDIACGCQYLEE-NHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 540 XXXXXXXXXXXPDTVA-----YKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQH 593
A + PE TSK+D ++FGVLL E+ + G P +
Sbjct: 191 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP--Y 247
Query: 594 PYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ 648
P + ++LE+V + R+D + N G + + + C PE RP +L+ I+
Sbjct: 248 PSKSNQEVLEFVTSGGRMDPPK--NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 122/297 (41%), Gaps = 32/297 (10%)
Query: 375 VFCAGESEVYSLEQLMRASAEL---LGRGSIGTTYKAVLDNH------LIVTVKRFDANK 425
F S + L+++ R + L LG G+ G Y+ + L V VK
Sbjct: 30 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---P 86
Query: 426 TADTSAEAFEQHMEA--VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRS 483
+ + + MEA + +H N+V R ++ + G L + + +R
Sbjct: 87 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 146
Query: 484 IRAKP--LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYC 538
++P L L +A D+A G Y+ + IH ++ + N LL G A++ D+
Sbjct: 147 RPSQPSSLAMLDLLHVARDIACGCQYLEE-NHFIHRDIAARNCLLTCPGPGRVAKIGDFG 205
Query: 539 XXXXXXXXXXXXPDTVA-----YKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
A + PE TSK+D ++FGVLL E+ + G P
Sbjct: 206 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP-- 262
Query: 593 HPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ 648
+P + ++LE+V + R+D + N G + + + C PE RP +L+ I+
Sbjct: 263 YPSKSNQEVLEFVTSGGRMDPPK--NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 122/297 (41%), Gaps = 32/297 (10%)
Query: 375 VFCAGESEVYSLEQLMRASAEL---LGRGSIGTTYKAVLDNH------LIVTVKRFDANK 425
F S + L+++ R + L LG G+ G Y+ + L V VK
Sbjct: 13 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---P 69
Query: 426 TADTSAEAFEQHMEA--VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRS 483
+ + + MEA + +H N+V R ++ + G L + + +R
Sbjct: 70 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 129
Query: 484 IRAKP--LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYC 538
++P L L +A D+A G Y+ + IH ++ + N LL G A++ D+
Sbjct: 130 RPSQPSSLAMLDLLHVARDIACGCQYLEE-NHFIHRDIAARNCLLTCPGPGRVAKIGDFG 188
Query: 539 XXXXXXXXXXXXPDTVA-----YKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
A + PE TSK+D ++FGVLL E+ + G P
Sbjct: 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP-- 245
Query: 593 HPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ 648
+P + ++LE+V + R+D + N G + + + C PE RP +L+ I+
Sbjct: 246 YPSKSNQEVLEFVTSGGRMDPPK--NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 441 VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT--SCLKIA 498
+G HPN++ + +++ +Y NGSL + +R +T + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF------LRKHDAQFTVIQLVGML 153
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKA 558
+A G+ Y+ +H +L + N+L+ ++ +++D+ T K
Sbjct: 154 RGIASGMKYLSDMG-FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 559 PEIRKSS------RRATSKSDVYAFGVLLLELLT-GKHP 590
P IR +S R+ TS SDV+++G++L E+++ G+ P
Sbjct: 213 P-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 441 VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT--SCLKIA 498
+G HPN++ + +++ +Y NGSL + +R +T + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF------LRKHDAQFTVIQLVGML 153
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKA 558
+A G+ Y+ + +H +L + N+L+ ++ +++D+ T K
Sbjct: 154 RGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 559 PEIRKSS------RRATSKSDVYAFGVLLLELLT-GKHP 590
P IR +S R+ TS SDV+++G++L E+++ G+ P
Sbjct: 213 P-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 122/297 (41%), Gaps = 32/297 (10%)
Query: 375 VFCAGESEVYSLEQLMRASAEL---LGRGSIGTTYKAVLDNH------LIVTVKRFDANK 425
F S + L+++ R + L LG G+ G Y+ + L V VK
Sbjct: 5 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---P 61
Query: 426 TADTSAEAFEQHMEA--VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRS 483
+ + + MEA + +H N+V R ++ + G L + + +R
Sbjct: 62 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 121
Query: 484 IRAKP--LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYC 538
++P L L +A D+A G Y+ + IH ++ + N LL G A++ D+
Sbjct: 122 RPSQPSSLAMLDLLHVARDIACGCQYLEE-NHFIHRDIAARNCLLTCPGPGRVAKIGDFG 180
Query: 539 XXXXXXXXXXXXPDTVA-----YKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
A + PE TSK+D ++FGVLL E+ + G P
Sbjct: 181 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP-- 237
Query: 593 HPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ 648
+P + ++LE+V + R+D + N G + + + C PE RP +L+ I+
Sbjct: 238 YPSKSNQEVLEFVTSGGRMDPPK--NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 441 VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT--SCLKIA 498
+G HPN++ + +++ +Y NGSL + +R +T + +
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF------LRKHDAQFTVIQLVGML 151
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKA 558
+A G+ Y+ + +H +L + N+L+ ++ +++D+ T K
Sbjct: 152 RGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 210
Query: 559 PEIRKSS------RRATSKSDVYAFGVLLLELLT-GKHP 590
P IR +S R+ TS SDV+++G++L E+++ G+ P
Sbjct: 211 P-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 122/297 (41%), Gaps = 32/297 (10%)
Query: 375 VFCAGESEVYSLEQLMRASAEL---LGRGSIGTTYKAVLDNH------LIVTVKRFDANK 425
F S + L+++ R + L LG G+ G Y+ + L V VK
Sbjct: 54 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---P 110
Query: 426 TADTSAEAFEQHMEA--VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRS 483
+ + + MEA + +H N+V R ++ + G L + + +R
Sbjct: 111 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 170
Query: 484 IRAKP--LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYC 538
++P L L +A D+A G Y+ + IH ++ + N LL G A++ D+
Sbjct: 171 RPSQPSSLAMLDLLHVARDIACGCQYLEE-NHFIHRDIAARNCLLTCPGPGRVAKIGDFG 229
Query: 539 XXXXXXXXXXXXPDTVA-----YKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
A + PE TSK+D ++FGVLL E+ + G P
Sbjct: 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP-- 286
Query: 593 HPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ 648
+P + ++LE+V + R+D + N G + + + C PE RP +L+ I+
Sbjct: 287 YPSKSNQEVLEFVTSGGRMDPPK--NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 441 VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT--SCLKIA 498
+G HPN++ + +++ +Y NGSL + +R +T + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF------LRKHDAQFTVIQLVGML 153
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKA 558
+A G+ Y+ + +H +L + N+L+ ++ +++D+ T K
Sbjct: 154 RGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI 212
Query: 559 PEIRKSS------RRATSKSDVYAFGVLLLELLT-GKHP 590
P IR +S R+ TS SDV+++G++L E+++ G+ P
Sbjct: 213 P-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 122/296 (41%), Gaps = 32/296 (10%)
Query: 376 FCAGESEVYSLEQLMRASAEL---LGRGSIGTTYKAVLDNH------LIVTVKRFDANKT 426
F S + L+++ R + L LG G+ G Y+ + L V VK
Sbjct: 21 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PE 77
Query: 427 ADTSAEAFEQHMEA--VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSI 484
+ + + MEA + +H N+V R ++ + G L + + +R
Sbjct: 78 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 137
Query: 485 RAKP--LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYCX 539
++P L L +A D+A G Y+ + IH ++ + N LL G A++ D+
Sbjct: 138 PSQPSSLAMLDLLHVARDIACGCQYLEENHF-IHRDIAARNCLLTCPGPGRVAKIGDFGM 196
Query: 540 XXXXXXXXXXXPDTVA-----YKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQH 593
A + PE TSK+D ++FGVLL E+ + G P +
Sbjct: 197 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP--Y 253
Query: 594 PYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ 648
P + ++LE+V + R+D + N G + + + C PE RP +L+ I+
Sbjct: 254 PSKSNQEVLEFVTSGGRMDPPK--NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E +G G+ G YKA + +K+ K + + + + L H N+V +
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 455 YFQAKGERLVIYDY--QPNGSLFNLIHGS-RSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
K ++++++ Q L ++ G S+ AK + G+AY H
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSF--------LLQLLNGIAYCHDR 119
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSRRA 568
++H +LK N+L+ + E ++ D+ T+ Y+AP++ S++
Sbjct: 120 R-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178
Query: 569 TSKSDVYAFGVLLLELLTG 587
++ D+++ G + E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E +G G+ G YKA + +K+ K + + + + L H N+V +
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 455 YFQAKGERLVIYDY--QPNGSLFNLIHGS-RSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
K ++++++ Q L ++ G S+ AK + G+AY H
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSF--------LLQLLNGIAYCHDR 119
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSRRA 568
++H +LK N+L+ + E ++ D+ T+ Y+AP++ S++
Sbjct: 120 R-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 569 TSKSDVYAFGVLLLELLTG 587
++ D+++ G + E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E +G G+ G YKA + +K+ K + + + + L H N+V +
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 455 YFQAKGERLVIYDY--QPNGSLFNLIHGS-RSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
K ++++++ Q L ++ G S+ AK + G+AY H
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSF--------LLQLLNGIAYCHDR 119
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSRRA 568
++H +LK N+L+ + E ++ D+ T+ Y+AP++ S++
Sbjct: 120 R-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 569 TSKSDVYAFGVLLLELLTG 587
++ D+++ G + E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 122/297 (41%), Gaps = 32/297 (10%)
Query: 375 VFCAGESEVYSLEQLMRASAEL---LGRGSIGTTYKAVLDNH------LIVTVKRFDANK 425
F S + L+++ R + L LG G+ G Y+ + L V VK
Sbjct: 31 CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---P 87
Query: 426 TADTSAEAFEQHMEA--VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRS 483
+ + + MEA + +H N+V R ++ + G L + + +R
Sbjct: 88 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 147
Query: 484 IRAKP--LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYC 538
++P L L +A D+A G Y+ + IH ++ + N LL G A++ D+
Sbjct: 148 RPSQPSSLAMLDLLHVARDIACGCQYLEE-NHFIHRDIAARNCLLTCPGPGRVAKIGDFG 206
Query: 539 XXXXXXXXXXXXPDTVA-----YKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
A + PE TSK+D ++FGVLL E+ + G P
Sbjct: 207 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP-- 263
Query: 593 HPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ 648
+P + ++LE+V + R+D + N G + + + C PE RP +L+ I+
Sbjct: 264 YPSKSNQEVLEFVTSGGRMDPPK--NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 388 QLMRASAEL---LGRGSIGTTYKAVL---DNHLIVTVKRFDANKTADTSAEAFEQHMEAV 441
++ R EL +G G G ++ + +N + + N T+D+ E F Q +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
HP++V + + +I + G L + + +R L S + A +
Sbjct: 66 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQL 120
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYK 557
+ LAY+ +H ++ + NVL+ ++ +L D+ + +
Sbjct: 121 STALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
APE + RR TS SDV+ FGV + E+L G P Q
Sbjct: 180 APE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 388 QLMRASAEL---LGRGSIGTTYKAVL---DNHLIVTVKRFDANKTADTSAEAFEQHMEAV 441
++ R EL +G G G ++ + +N + + N T+D+ E F Q +
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
HP++V + + +I + G L + + +R L S + A +
Sbjct: 63 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQL 117
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYK 557
+ LAY+ +H ++ + NVL+ ++ +L D+ + +
Sbjct: 118 STALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 176
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
APE + RR TS SDV+ FGV + E+L G P Q
Sbjct: 177 APE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 388 QLMRASAEL---LGRGSIGTTYKAVL---DNHLIVTVKRFDANKTADTSAEAFEQHMEAV 441
++ R EL +G G G ++ + +N + + N T+D+ E F Q +
Sbjct: 34 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 93
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
HP++V + + +I + G L + + +R L S + A +
Sbjct: 94 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQL 148
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYK 557
+ LAY+ +H ++ + NVL+ ++ +L D+ + +
Sbjct: 149 STALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 207
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
APE + RR TS SDV+ FGV + E+L G P Q
Sbjct: 208 APE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 242
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 92/224 (41%), Gaps = 20/224 (8%)
Query: 375 VFCAGESEVYSLEQLMRASAELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSA-- 431
VF E + +++RA +G+GS G D + +K + K + +
Sbjct: 5 VFDENEDVNFDHFEILRA----IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVR 60
Query: 432 EAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHW 491
F++ ++ + GL HP LV + FQ + + ++ D G L + + + + +
Sbjct: 61 NVFKE-LQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL 119
Query: 492 TSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXXXXXXXXXXX 549
C ++ L Y+ +IH ++K N+LL +TD+
Sbjct: 120 FIC-----ELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT 173
Query: 550 XPDTVAYKAPEIRKSSRRATSKS---DVYAFGVLLLELLTGKHP 590
T Y APE+ SSR+ S D ++ GV ELL G+ P
Sbjct: 174 MAGTKPYMAPEMF-SSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 388 QLMRASAEL---LGRGSIGTTYKAVL---DNHLIVTVKRFDANKTADTSAEAFEQHMEAV 441
++ R EL +G G G ++ + +N + + N T+D+ E F Q +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
HP++V + + +I + G L + + +R L S + A +
Sbjct: 66 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQL 120
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYK 557
+ LAY+ +H ++ + NVL+ ++ +L D+ + +
Sbjct: 121 STALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
APE + RR TS SDV+ FGV + E+L G P Q
Sbjct: 180 APE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 426 TADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIR 485
T +++ A + + L HPN++ + +F+ K ++ + G LF+ I I
Sbjct: 60 TTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI-----IL 114
Query: 486 AKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA---DFEARLTDYCXXXX 542
+ I + V G Y+H+ + ++H +LK N+LL + D ++ D+
Sbjct: 115 RQKFSEVDAAVIMKQVLSGTTYLHKHN-IVHRDLKPENLLLESKSRDALIKIVDFGLSAH 173
Query: 543 XXXXXXXXP--DTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
T Y APE+ + ++ K DV++ GV+L LL G P
Sbjct: 174 FEVGGKMKERLGTAYYIAPEVLR--KKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 16/167 (9%)
Query: 432 EAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRA---KP 488
E Q + + L HPN+V + E + +F L++ + KP
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYM-------VFELVNQGPVMEVPTLKP 133
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXX 548
L +D+ +G+ Y+H +IH ++K SN+L+G D ++ D+
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQK-IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 549 XXPDTV---AYKAPEIRKSSRRATSKS--DVYAFGVLLLELLTGKHP 590
+TV A+ APE +R+ S DV+A GV L + G+ P
Sbjct: 193 LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 388 QLMRASAEL---LGRGSIGTTYKAVL---DNHLIVTVKRFDANKTADTSAEAFEQHMEAV 441
++ R EL +G G G ++ + +N + + N T+D+ E F Q +
Sbjct: 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
HP++V + + +I + G L + + +R L S + A +
Sbjct: 71 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQL 125
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYK 557
+ LAY+ +H ++ + NVL+ ++ +L D+ + +
Sbjct: 126 STALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 184
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
APE + RR TS SDV+ FGV + E+L G P Q
Sbjct: 185 APE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 219
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 18/216 (8%)
Query: 388 QLMRASAEL---LGRGSIGTTYKAVL---DNHLIVTVKRFDANKTADTSAEAFEQHMEAV 441
++ R EL +G G G ++ + +N + + N T+D+ E F Q +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
HP++V + + +I + G L + + +R L S + A +
Sbjct: 66 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQL 120
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYK 557
+ LAY+ +H ++ + NVL+ A +L D+ + +
Sbjct: 121 STALAYLESKR-FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
APE + RR TS SDV+ FGV + E+L G P Q
Sbjct: 180 APE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 18/216 (8%)
Query: 388 QLMRASAEL---LGRGSIGTTYKAVL---DNHLIVTVKRFDANKTADTSAEAFEQHMEAV 441
++ R EL +G G G ++ + +N + + N T+D+ E F Q +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
HP++V + + +I + G L + + +R L S + A +
Sbjct: 66 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQL 120
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYK 557
+ LAY+ +H ++ + NVL+ ++ +L D+ + +
Sbjct: 121 STALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWM 179
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
APE + RR TS SDV+ FGV + E+L G P Q
Sbjct: 180 APE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 388 QLMRASAEL---LGRGSIGTTYKAVL---DNHLIVTVKRFDANKTADTSAEAFEQHMEAV 441
++ R EL +G G G ++ + +N + + N T+D+ E F Q +
Sbjct: 8 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 67
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
HP++V + + +I + G L + + +R L S + A +
Sbjct: 68 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQL 122
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYK 557
+ LAY+ +H ++ + NVL+ ++ +L D+ + +
Sbjct: 123 STALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 181
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
APE + RR TS SDV+ FGV + E+L G P Q
Sbjct: 182 APE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 216
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 122/296 (41%), Gaps = 32/296 (10%)
Query: 376 FCAGESEVYSLEQLMRASAEL---LGRGSIGTTYKAVLDNH------LIVTVKRFDANKT 426
F S + L+++ R + L LG G+ G Y+ + L V VK
Sbjct: 41 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PE 97
Query: 427 ADTSAEAFEQHMEA--VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSI 484
+ + + MEA + +H N+V R ++ + G L + + +R
Sbjct: 98 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 157
Query: 485 RAKP--LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYCX 539
++P L L +A D+A G Y+ + IH ++ + N LL G A++ D+
Sbjct: 158 PSQPSSLAMLDLLHVARDIACGCQYLEENHF-IHRDIAARNCLLTCPGPGRVAKIGDFGM 216
Query: 540 XXXXXXXXXXXPDTVA-----YKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQH 593
A + PE TSK+D ++FGVLL E+ + G P +
Sbjct: 217 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMP--Y 273
Query: 594 PYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ 648
P + ++LE+V + R+D + N G + + + C PE RP +L+ I+
Sbjct: 274 PSKSNQEVLEFVTSGGRMDPPK--NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 15/167 (8%)
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSC 494
E +E + L+HP ++ I+ +F A+ + ++ + G LF+ + G++ ++ +C
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKE-----ATC 255
Query: 495 LKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFE---ARLTDY--CXXXXXXXXXXX 549
+ + Y+H +IH +LK NVLL + E ++TD+
Sbjct: 256 KLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 314
Query: 550 XPDTVAYKAPEIRKSSRRA--TSKSDVYAFGVLLLELLTGKHP-SQH 593
T Y APE+ S A D ++ GV+L L+G P S+H
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 361
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
L HPN++ + +F+ K ++ + G LF+ I I + I + V
Sbjct: 61 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI-----ILRQKFSEVDAAVIMKQVLS 115
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGA---DFEARLTDYCXXXXXXXXXXXXP--DTVAYKA 558
G Y+H+ + ++H +LK N+LL + D ++ D+ T Y A
Sbjct: 116 GTTYLHKHN-IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIA 174
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
PE+ + ++ K DV++ GV+L LL G P
Sbjct: 175 PEVLR--KKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 15/167 (8%)
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSC 494
E +E + L+HP ++ I+ +F A+ + ++ + G LF+ + G++ ++ +C
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKE-----ATC 241
Query: 495 LKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFE---ARLTDY--CXXXXXXXXXXX 549
+ + Y+H +IH +LK NVLL + E ++TD+
Sbjct: 242 KLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 300
Query: 550 XPDTVAYKAPEIRKSSRRA--TSKSDVYAFGVLLLELLTGKHP-SQH 593
T Y APE+ S A D ++ GV+L L+G P S+H
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 347
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIR 562
+GL YIH A ++H +LK N+ + D E ++ D+ T Y+APE+
Sbjct: 155 KGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVI 213
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGK 588
S D+++ G ++ E+LTGK
Sbjct: 214 LSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSC 494
E +E + L+HP ++ I+ +F A+ + ++ + G LF+ + G++ ++ +C
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKE-----ATC 116
Query: 495 LKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFE---ARLTDY--CXXXXXXXXXXX 549
+ + Y+H + +IH +LK NVLL + E ++TD+
Sbjct: 117 KLYFYQMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 550 XPDTVAYKAPEIRKSSRRA--TSKSDVYAFGVLLLELLTGKHP-SQH 593
T Y APE+ S A D ++ GV+L L+G P S+H
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIR 562
+GL YIH A ++H +LK N+ + D E ++ D+ T Y+APE+
Sbjct: 137 KGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVI 195
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGK 588
S D+++ G ++ E+LTGK
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSC 494
E +E + L+HP ++ I+ +F A+ + ++ + G LF+ + G++ ++ +C
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKE-----ATC 116
Query: 495 LKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFE---ARLTDY--CXXXXXXXXXXX 549
+ + Y+H + +IH +LK NVLL + E ++TD+
Sbjct: 117 KLYFYQMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 550 XPDTVAYKAPEIRKSSRRA--TSKSDVYAFGVLLLELLTGKHP-SQH 593
T Y APE+ S A D ++ GV+L L+G P S+H
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSC 494
E +E + L+HP ++ I+ +F A+ + ++ + G LF+ + G++ ++ +C
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKE-----ATC 116
Query: 495 LKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFE---ARLTDY--CXXXXXXXXXXX 549
+ + Y+H + +IH +LK NVLL + E ++TD+
Sbjct: 117 KLYFYQMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 550 XPDTVAYKAPEIRKSSRRA--TSKSDVYAFGVLLLELLTGKHP-SQH 593
T Y APE+ S A D ++ GV+L L+G P S+H
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVA 502
L HP V + FQ + Y NG L I S +C + ++
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDE------TCTRFYTAEIV 142
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPDTVAYK 557
L Y+H +IH +LK N+LL D ++TD+ T Y
Sbjct: 143 SALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 201
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+PE+ + + A+ SD++A G ++ +L+ G P
Sbjct: 202 SPELL-TEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 396 LLGRGSIGTTYKAVLDNH----LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
+LG G G Y+ V NH + V VK + T D + E F + L HP++V
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD-NKEKFMSEAVIMKNLDHPHIVK 89
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ + + +++ Y P G L + + +++ L + + + + + +AY+
Sbjct: 90 LIGIIEEEPTWIIMELY-PYGELGHYLERNKN----SLKVLTLVLYSLQICKAMAYLESI 144
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRR 567
+ +H ++ N+L+ + +L D+ + + +PE + RR
Sbjct: 145 N-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE-SINFRR 202
Query: 568 ATSKSDVYAFGVLLLELLT-GKHP 590
T+ SDV+ F V + E+L+ GK P
Sbjct: 203 FTTASDVWMFAVCMWEILSFGKQP 226
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSC 494
E +E + L+HP ++ I+ +F A+ + ++ + G LF+ + G++ ++ +C
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKE-----ATC 115
Query: 495 LKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFE---ARLTDY--CXXXXXXXXXXX 549
+ + Y+H + +IH +LK NVLL + E ++TD+
Sbjct: 116 KLYFYQMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 174
Query: 550 XPDTVAYKAPEIRKSSRRA--TSKSDVYAFGVLLLELLTGKHP-SQH 593
T Y APE+ S A D ++ GV+L L+G P S+H
Sbjct: 175 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 221
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 18/209 (8%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
+GRGS G AV I + K + F+Q +E + L HPN++ + F
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAK-KIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ + ++ + G LF + R R + +I +DV +AY H+ + + H
Sbjct: 76 EDNTDIYLVMELCTGGELFERVVHKRVFRE-----SDAARIMKDVLSAVAYCHKLN-VAH 129
Query: 517 GNLKSSNVLL---GADFEARLTDY--CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
+LK N L D +L D+ T Y +P++ + +
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL--YGPE 187
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPD 600
D ++ GV++ LL G +P P+ AP D
Sbjct: 188 CDEWSAGVMMYVLLCG-YP---PFSAPTD 212
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 397 LGRGSIGTTYKAVLDNHL--IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
+G GS G A + H V VK+ D K E + + H N+V + +
Sbjct: 53 IGEGSTGIVCIAT-EKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHDNVVDMYS 109
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
+ E V+ ++ G+L +++ +R + T CL V + L+Y+H +
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA--TVCLS----VLRALSYLHNQG-V 162
Query: 515 IHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATSK 571
IH ++KS ++LL +D +L+D+ V + APE+ S ++
Sbjct: 163 IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEV-ISRLPYGTE 221
Query: 572 SDVYAFGVLLLELLTGKHP 590
D+++ G++++E++ G+ P
Sbjct: 222 VDIWSLGIMVIEMIDGEPP 240
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 396 LLGRGSIGTTYKAVLDNH----LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
+LG G G Y+ V NH + V VK + T D + E F + L HP++V
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD-NKEKFMSEAVIMKNLDHPHIVK 73
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ + + +++ Y P G L + + +++ L + + + + + +AY+
Sbjct: 74 LIGIIEEEPTWIIMELY-PYGELGHYLERNKN----SLKVLTLVLYSLQICKAMAYLESI 128
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRR 567
+ +H ++ N+L+ + +L D+ + + +PE + RR
Sbjct: 129 N-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE-SINFRR 186
Query: 568 ATSKSDVYAFGVLLLELLT-GKHP 590
T+ SDV+ F V + E+L+ GK P
Sbjct: 187 FTTASDVWMFAVCMWEILSFGKQP 210
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 396 LLGRGSIGTTYKAVLDNH----LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
+LG G G Y+ V NH + V VK + T D + E F + L HP++V
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD-NKEKFMSEAVIMKNLDHPHIVK 77
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ + + +++ Y P G L + + +++ L + + + + + +AY+
Sbjct: 78 LIGIIEEEPTWIIMELY-PYGELGHYLERNKN----SLKVLTLVLYSLQICKAMAYLESI 132
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYKAPEIRKSSRR 567
+ +H ++ N+L+ + +L D+ + + +PE + RR
Sbjct: 133 N-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE-SINFRR 190
Query: 568 ATSKSDVYAFGVLLLELLT-GKHP 590
T+ SDV+ F V + E+L+ GK P
Sbjct: 191 FTTASDVWMFAVCMWEILSFGKQP 214
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSC 494
E +E + L+HP ++ I+ +F A+ + ++ + G LF+ + G++ ++ +C
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKE-----ATC 122
Query: 495 LKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFE---ARLTDY--CXXXXXXXXXXX 549
+ + Y+H + +IH +LK NVLL + E ++TD+
Sbjct: 123 KLYFYQMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 181
Query: 550 XPDTVAYKAPEIRKSSRRA--TSKSDVYAFGVLLLELLTGKHP-SQH 593
T Y APE+ S A D ++ GV+L L+G P S+H
Sbjct: 182 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 228
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Query: 447 PNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLA 506
P LV + FQ + + +I DY G LF + S R + + + E + L
Sbjct: 119 PFLVTLHYAFQTETKLHLILDYINGGELFTHL----SQRERFTEHEVQIYVGE-IVLALE 173
Query: 507 YIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP----DTVAYKAPEIR 562
++H+ +I+ ++K N+LL ++ LTD+ T+ Y AP+I
Sbjct: 174 HLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 232
Query: 563 KSSRRATSKS-DVYAFGVLLLELLTGKHP 590
+ K+ D ++ GVL+ ELLTG P
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 18/209 (8%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
+GRGS G AV I + K + F+Q +E + L HPN++ + F
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAK-KIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 92
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ + ++ + G LF + R R + +I +DV +AY H+ + + H
Sbjct: 93 EDNTDIYLVMELCTGGELFERVVHKRVFRE-----SDAARIMKDVLSAVAYCHKLN-VAH 146
Query: 517 GNLKSSNVLL---GADFEARLTDY--CXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSK 571
+LK N L D +L D+ T Y +P++ + +
Sbjct: 147 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL--YGPE 204
Query: 572 SDVYAFGVLLLELLTGKHPSQHPYLAPPD 600
D ++ GV++ LL G +P P+ AP D
Sbjct: 205 CDEWSAGVMMYVLLCG-YP---PFSAPTD 229
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 12/149 (8%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQ 503
HP+++ + + ++ +Y G LF+ I HG R + + ++ + +
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG----RVEEM---EARRLFQQILS 122
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
+ Y HR ++H +LK NVLL A A++ D+ + Y APE+
Sbjct: 123 AVDYCHR-HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEV 181
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHP 590
A + D+++ GV+L LL G P
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 12/149 (8%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQ 503
HP+++ + + ++ +Y G LF+ I HG R + + ++ + +
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG----RVEEM---EARRLFQQILS 122
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
+ Y HR ++H +LK NVLL A A++ D+ + Y APE+
Sbjct: 123 AVDYCHR-HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEV 181
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHP 590
A + D+++ GV+L LL G P
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 394 AELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+V
Sbjct: 8 VEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + +++++ + L + + S ++ PL + QGLA+ H
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKDFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH- 120
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSRR 567
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 121 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 568 ATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 14/158 (8%)
Query: 439 EAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI- 497
+ + L HP V + FQ + Y NG L I S +C +
Sbjct: 62 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFY 115
Query: 498 AEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPD 552
++ L Y+H +IH +LK N+LL D ++TD+
Sbjct: 116 TAEIVSALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 553 TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
T Y +PE+ + + A SD++A G ++ +L+ G P
Sbjct: 175 TAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 14/158 (8%)
Query: 439 EAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI- 497
+ + L HP V + FQ + Y NG L I S +C +
Sbjct: 59 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFY 112
Query: 498 AEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPD 552
++ L Y+H +IH +LK N+LL D ++TD+
Sbjct: 113 TAEIVSALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 553 TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
T Y +PE+ + + A SD++A G ++ +L+ G P
Sbjct: 172 TAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 14/158 (8%)
Query: 439 EAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI- 497
+ + L HP V + FQ + Y NG L I S +C +
Sbjct: 61 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFY 114
Query: 498 AEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPD 552
++ L Y+H +IH +LK N+LL D ++TD+
Sbjct: 115 TAEIVSALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 553 TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
T Y +PE+ + + A SD++A G ++ +L+ G P
Sbjct: 174 TAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 394 AELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+V
Sbjct: 11 VEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 68
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + +++++ + L + + S ++ PL + QGLA+ H
Sbjct: 69 KLLDVIHTENKLYLVFEFL-SMDLKDFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH- 123
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSRR 567
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 568 ATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 184 YSTAVDIWSLGCIFAEMVT 202
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 14/153 (9%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVA 502
L HP V + FQ + Y NG L I S +C + ++
Sbjct: 90 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD------ETCTRFYTAEIV 143
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPDTVAYK 557
L Y+H +IH +LK N+LL D ++TD+ T Y
Sbjct: 144 SALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 202
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+PE+ + + A SD++A G ++ +L+ G P
Sbjct: 203 SPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 85/203 (41%), Gaps = 17/203 (8%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDAN---KTADTSAEAFEQHMEAVGGLSHPNLVP 451
E LG G+ G ++ T F A ++ E + ++ + L HP LV
Sbjct: 163 EELGTGAFGVVHRVTER----ATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 218
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ F+ E ++IY++ G LF + + ++ ++ V +GL ++H
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE----DEAVEYMRQVCKGLCHMHEN 274
Query: 512 SWLIHGNLKSSNVLLGADF--EARLTDY--CXXXXXXXXXXXXPDTVAYKAPEIRKSSRR 567
++ +H +LK N++ E +L D+ T + APE+ + +
Sbjct: 275 NY-VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAE-GKP 332
Query: 568 ATSKSDVYAFGVLLLELLTGKHP 590
+D+++ GVL LL+G P
Sbjct: 333 VGYYTDMWSVGVLSYILLSGLSP 355
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 14/153 (9%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVA 502
L HP V + FQ + Y NG L I S +C + ++
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD------ETCTRFYTAEIV 140
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPDTVAYK 557
L Y+H +IH +LK N+LL D ++TD+ T Y
Sbjct: 141 SALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYV 199
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+PE+ + + A SD++A G ++ +L+ G P
Sbjct: 200 SPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 14/158 (8%)
Query: 439 EAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI- 497
+ + L HP V + FQ + Y NG L I S +C +
Sbjct: 60 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFY 113
Query: 498 AEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPD 552
++ L Y+H +IH +LK N+LL D ++TD+
Sbjct: 114 TAEIVSALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 553 TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
T Y +PE+ + + A SD++A G ++ +L+ G P
Sbjct: 173 TAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 34/229 (14%)
Query: 394 AELLGRGSIGTTYKAVL-----DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPN 448
++LG G+ GT YK + + + V +K N + + E ++ + G+ P
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAY-VMAGVGSPY 80
Query: 449 LVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP--LHWTSCLKIAEDVAQGLA 506
+ + +LV P G L + + +R L+W C++IA +G++
Sbjct: 81 VSRLLGICLTSTVQLVT-QLMPYGCLLDHVRENRGRLGSQDLLNW--CMQIA----KGMS 133
Query: 507 YIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPEIRKS-- 564
Y+ L+H +L + NVL+ + ++TD+ D Y A +
Sbjct: 134 YLEDVR-LVHRDLAARNVLVKSPNHVKITDFGLARLLDI------DETEYHADGGKVPIK 186
Query: 565 --------SRRATSKSDVYAFGVLLLELLT-GKHPSQH-PYLAPPDMLE 603
RR T +SDV+++GV + EL+T G P P PD+LE
Sbjct: 187 WMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE 235
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 85/203 (41%), Gaps = 17/203 (8%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDAN---KTADTSAEAFEQHMEAVGGLSHPNLVP 451
E LG G+ G ++ T F A ++ E + ++ + L HP LV
Sbjct: 57 EELGTGAFGVVHRVTER----ATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 112
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ F+ E ++IY++ G LF + + ++ ++ V +GL ++H
Sbjct: 113 LHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE----DEAVEYMRQVCKGLCHMHEN 168
Query: 512 SWLIHGNLKSSNVLLGADF--EARLTDY--CXXXXXXXXXXXXPDTVAYKAPEIRKSSRR 567
++ +H +LK N++ E +L D+ T + APE+ + +
Sbjct: 169 NY-VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAE-GKP 226
Query: 568 ATSKSDVYAFGVLLLELLTGKHP 590
+D+++ GVL LL+G P
Sbjct: 227 VGYYTDMWSVGVLSYILLSGLSP 249
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVA 502
L HP V + FQ + Y NG L I S +C + ++
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD------ETCTRFYTAEIV 142
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPDTVAYK 557
L Y+H +IH +LK N+LL D ++TD+ T Y
Sbjct: 143 SALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+PE+ + + A SD++A G ++ +L+ G P
Sbjct: 202 SPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 46/163 (28%)
Query: 77 VRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDXXXXXXXXXXXXXRNFFSG 136
+ F+ S+ + + P + + L +L+L +N ++G IPD
Sbjct: 631 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD------------------- 671
Query: 137 AFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVV 196
+ L L ILDLS N L G IP ++AL L + L
Sbjct: 672 ----EVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL------------------- 708
Query: 197 FNVSGNNLTGQVPETPTLLKFDASSFSMNPNLCGKVINKACRP 239
S NNL+G +PE F + F NP LCG + + C P
Sbjct: 709 ---SNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPR-CDP 747
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 92 PNTLTRLD-QLRVLSLHNNSLTGPI-PDXXX--XXXXXXXXXXRNFFSGAFPLSILSLHR 147
P +LT L L L L +N+ +GPI P+ N F+G P ++ +
Sbjct: 357 PESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSE 416
Query: 148 LTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSG-----N 202
L L LS+N L+G IP +L +L +L LKL N G +P Q + V + N
Sbjct: 417 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP---QELMYVKTLETLILDFN 473
Query: 203 NLTGQVP 209
+LTG++P
Sbjct: 474 DLTGEIP 480
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 86 LRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DXXXXXXXXXXXXXRNFFSGAFPLSILS 144
L GT P ++L L +LR L L N L G IP + N +G P + +
Sbjct: 427 LSGTIP-SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 485
Query: 145 LHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVP 187
L + LS N LTG IP + L+ L LKL N FSG +P
Sbjct: 486 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 528
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 67/154 (43%), Gaps = 37/154 (24%)
Query: 88 GTFPPNTLTRLDQLRVLSLHNNSLTGPIPDXXXXXXXXXXXXXRNFFSGAFPLSILSLHR 147
G PP L L+ LSL N TG IPD F SGA
Sbjct: 258 GPIPP---LPLKSLQYLSLAENKFTGEIPD---------------FLSGA-------CDT 292
Query: 148 LTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPP---LNQPFLVVFNVSGNNL 204
LT LDLS N+ G +P + L SL L N FSG +P L L V ++S N
Sbjct: 293 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 352
Query: 205 TGQVPETPT-----LLKFDASSFSMN----PNLC 229
+G++PE+ T LL D SS + + PNLC
Sbjct: 353 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 386
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 92 PNTLTRLDQLRVLSLHNNSLTGPIPDXXXXXXXXX-XXXXRNFFSGAFPLSILSLHRLTI 150
P L + L L L N LTG IP N +G P I L L I
Sbjct: 456 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI 515
Query: 151 LDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVP 187
L LS N+ +G IP L L L L N F+GT+P
Sbjct: 516 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Query: 100 QLRVLSLHNNSLTGPIPDXXXXXXXXXXXXXRNFFSGAFPLSILSLHRLTILDLSYNNLT 159
+L+ L++ N ++G + D N FS P + L LD+S N L+
Sbjct: 176 ELKHLAISGNKISGDV-DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLS 233
Query: 160 GLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPE 210
G ++ L L + N+F G +PPL L +++ N TG++P+
Sbjct: 234 GDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPD 284
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVA 502
L HP V + FQ + Y NG L I S +C + ++
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIV 140
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPDTVAYK 557
L Y+H +IH +LK N+LL D ++TD+ T Y
Sbjct: 141 SALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+PE+ + + A SD++A G ++ +L+ G P
Sbjct: 200 SPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVA 502
L HP V + FQ + Y NG L I S +C + ++
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD------ETCTRFYTAEIV 142
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPDTVAYK 557
L Y+H +IH +LK N+LL D ++TD+ T Y
Sbjct: 143 SALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+PE+ + + A SD++A G ++ +L+ G P
Sbjct: 202 SPELL-TEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVA 502
L HP V + FQ + Y NG L I S +C + ++
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD------ETCTRFYTAEIV 140
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPDTVAYK 557
L Y+H +IH +LK N+LL D ++TD+ T Y
Sbjct: 141 SALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+PE+ + + A SD++A G ++ +L+ G P
Sbjct: 200 SPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVA 502
L HP V + FQ + Y NG L I S +C + ++
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIV 140
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPDTVAYK 557
L Y+H +IH +LK N+LL D ++TD+ T Y
Sbjct: 141 SALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+PE+ + + A SD++A G ++ +L+ G P
Sbjct: 200 SPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVA 502
L HP V + FQ + Y NG L I S +C + ++
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIV 142
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPDTVAYK 557
L Y+H +IH +LK N+LL D ++TD+ T Y
Sbjct: 143 SALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+PE+ + + A SD++A G ++ +L+ G P
Sbjct: 202 SPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVA 502
L HP V + FQ + Y NG L I S +C + ++
Sbjct: 90 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD------ETCTRFYTAEIV 143
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPDTVAYK 557
L Y+H +IH +LK N+LL D ++TD+ T Y
Sbjct: 144 SALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 202
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+PE+ + + A SD++A G ++ +L+ G P
Sbjct: 203 SPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 46/163 (28%)
Query: 77 VRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDXXXXXXXXXXXXXRNFFSG 136
+ F+ S+ + + P + + L +L+L +N ++G IPD
Sbjct: 634 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD------------------- 674
Query: 137 AFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVV 196
+ L L ILDLS N L G IP ++AL L + L
Sbjct: 675 ----EVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL------------------- 711
Query: 197 FNVSGNNLTGQVPETPTLLKFDASSFSMNPNLCGKVINKACRP 239
S NNL+G +PE F + F NP LCG + + C P
Sbjct: 712 ---SNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPR-CDP 750
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 92 PNTLTRLD-QLRVLSLHNNSLTGPI-PDXXX--XXXXXXXXXXRNFFSGAFPLSILSLHR 147
P +LT L L L L +N+ +GPI P+ N F+G P ++ +
Sbjct: 360 PESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSE 419
Query: 148 LTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSG-----N 202
L L LS+N L+G IP +L +L +L LKL N G +P Q + V + N
Sbjct: 420 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP---QELMYVKTLETLILDFN 476
Query: 203 NLTGQVP 209
+LTG++P
Sbjct: 477 DLTGEIP 483
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 86 LRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DXXXXXXXXXXXXXRNFFSGAFPLSILS 144
L GT P ++L L +LR L L N L G IP + N +G P + +
Sbjct: 430 LSGTIP-SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 488
Query: 145 LHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVP 187
L + LS N LTG IP + L+ L LKL N FSG +P
Sbjct: 489 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 92 PNTLTRLDQLRVLSLHNNSLTGPIPDXXXXXXXXX-XXXXRNFFSGAFPLSILSLHRLTI 150
P L + L L L N LTG IP N +G P I L L I
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI 518
Query: 151 LDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVP 187
L LS N+ +G IP L L L L N F+GT+P
Sbjct: 519 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 67/154 (43%), Gaps = 37/154 (24%)
Query: 88 GTFPPNTLTRLDQLRVLSLHNNSLTGPIPDXXXXXXXXXXXXXRNFFSGAFPLSILSLHR 147
G PP L L+ LSL N TG IPD F SGA
Sbjct: 261 GPIPP---LPLKSLQYLSLAENKFTGEIPD---------------FLSGA-------CDT 295
Query: 148 LTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPP---LNQPFLVVFNVSGNNL 204
LT LDLS N+ G +P + L SL L N FSG +P L L V ++S N
Sbjct: 296 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355
Query: 205 TGQVPETPT-----LLKFDASSFSMN----PNLC 229
+G++PE+ T LL D SS + + PNLC
Sbjct: 356 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 389
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Query: 100 QLRVLSLHNNSLTGPIPDXXXXXXXXXXXXXRNFFSGAFPLSILSLHRLTILDLSYNNLT 159
+L+ L++ N ++G + D N FS P + L LD+S N L+
Sbjct: 179 ELKHLAISGNKISGDV-DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLS 236
Query: 160 GLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPE 210
G ++ L L + N+F G +PPL L +++ N TG++P+
Sbjct: 237 GDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPD 287
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVA 502
L HP V + FQ + Y NG L I S +C + ++
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD------ETCTRFYTAEIV 142
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPDTVAYK 557
L Y+H +IH +LK N+LL D ++TD+ T Y
Sbjct: 143 SALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+PE+ + + A SD++A G ++ +L+ G P
Sbjct: 202 SPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 388 QLMRASAEL---LGRGSIGTTYKAVL---DNHLIVTVKRFDANKTADTSAEAFEQHMEAV 441
++ R EL +G G G ++ + +N + + N T+D+ E F Q +
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
HP++V + + +I + G L + + +R L S + A +
Sbjct: 446 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQL 500
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYK 557
+ LAY+ + +H ++ + NVL+ A +L D+ + +
Sbjct: 501 STALAYLE-SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 559
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
APE + RR TS SDV+ FGV + E+L G P Q
Sbjct: 560 APE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVA 502
L HP V + FQ + Y NG L I S +C + ++
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD------ETCTRFYTAEIV 142
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPDTVAYK 557
L Y+H +IH +LK N+LL D ++TD+ T Y
Sbjct: 143 SALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+PE+ + + A SD++A G ++ +L+ G P
Sbjct: 202 SPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVA 502
L HP V + FQ + Y NG L I S +C + ++
Sbjct: 92 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD------ETCTRFYTAEIV 145
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPDTVAYK 557
L Y+H +IH +LK N+LL D ++TD+ T Y
Sbjct: 146 SALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 204
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+PE+ + + A SD++A G ++ +L+ G P
Sbjct: 205 SPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVA 502
L HP V + FQ + Y NG L I S +C + ++
Sbjct: 94 LDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFD------ETCTRFYTAEIV 147
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPDTVAYK 557
L Y+H +IH +LK N+LL D ++TD+ T Y
Sbjct: 148 SALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 206
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+PE+ + + A SD++A G ++ +L+ G P
Sbjct: 207 SPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 394 AELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+V
Sbjct: 10 VEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 67
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + +++++ + L + + S ++ PL + QGLA+ H
Sbjct: 68 KLLDVIHTENKLYLVFEFL-SMDLKDFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH- 122
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSRR 567
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 568 ATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 183 YSTAVDIWSLGCIFAEMVT 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 14 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 127
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 128 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 186
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 187 YYSTAVDIWSLGCIFAEMVT 206
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 23/226 (10%)
Query: 377 CAGESEVYSLEQLMRASAELLGRGSIGTTYKAV-LDNHLIVTVKRF---DANKTADTSAE 432
C + Y E +LG+G+ G Y L N + + +K D+ + E
Sbjct: 10 CESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEE 69
Query: 433 -AFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPL-- 489
A +H L H N+V F G + + P GSL L+ RS + PL
Sbjct: 70 IALHKH------LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALL---RS-KWGPLKD 119
Query: 490 HWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA-DFEARLTDYCXXXXXXXX-- 546
+ + + + +GL Y+H + ++H ++K NVL+ +++D+
Sbjct: 120 NEQTIGFYTKQILEGLKYLHD-NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178
Query: 547 -XXXXPDTVAYKAPEIRKSSRRATSKS-DVYAFGVLLLELLTGKHP 590
T+ Y APEI R K+ D+++ G ++E+ TGK P
Sbjct: 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 11 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 124
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 125 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 183
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 184 YYSTAVDIWSLGCIFAEMVT 203
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 95/220 (43%), Gaps = 18/220 (8%)
Query: 378 AGESEVYSLEQLMRASAELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQH 437
A + + ++ + +++G GS G ++A L V +K+ +K +
Sbjct: 29 ASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN------RE 82
Query: 438 MEAVGGLSHPNLVPIRAYFQAKGERL------VIYDYQPNGSLFNLIHGSRSIRAKPLHW 491
++ + + HPN+V ++A+F + G++ ++ +Y P H ++ + P+
Sbjct: 83 LQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLL 142
Query: 492 TSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEA-RLTDYCXXXXXXXXXXXX 550
+ + LAYIH + H ++K N+LL +L D+
Sbjct: 143 IKLY--MYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV 199
Query: 551 PDTVA--YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
+ Y+APE+ + T+ D+++ G ++ EL+ G+
Sbjct: 200 SXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 14 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 127
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 128 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 186
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 187 YYSTAVDIWSLGCIFAEMVT 206
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 14/153 (9%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVA 502
L HP V + FQ + Y NG L I S +C + ++
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIV 139
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPDTVAYK 557
L Y+H +IH +LK N+LL D ++TD+ T Y
Sbjct: 140 SALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 198
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+PE+ + + A SD++A G ++ +L+ G P
Sbjct: 199 SPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 385 SLEQLMRASAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAV 441
S+E + E +G G+ G YKA N L +V +K+ + + + + +
Sbjct: 3 SMENFQKV--EKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 58
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
L+HPN+V + + + +++++ + L + S ++ PL +
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QL 114
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKA 558
QGLA+ H + ++H +LK N+L+ + +L D+ T+ Y+A
Sbjct: 115 LQGLAFCH-SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLT 586
PEI + ++ D+++ G + E++T
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 14/158 (8%)
Query: 439 EAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI- 497
+ + L HP V + FQ + Y NG L I S +C +
Sbjct: 66 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFY 119
Query: 498 AEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPD 552
++ L Y+H +IH +LK N+LL D ++TD+
Sbjct: 120 TAEIVSALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 553 TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
T Y +PE+ + + A SD++A G ++ +L+ G P
Sbjct: 179 TAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 385 SLEQLMRASAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAV 441
S+E + E +G G+ G YKA N L +V +K+ + + + + +
Sbjct: 4 SMENFQKV--EKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
L+HPN+V + + + +++++ + L + S ++ PL +
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QL 115
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKA 558
QGLA+ H + ++H +LK N+L+ + +L D+ T+ Y+A
Sbjct: 116 LQGLAFCH-SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLT 586
PEI + ++ D+++ G + E++T
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 11 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 124
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 125 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 183
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 184 YYSTAVDIWSLGCIFAEMVT 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 385 SLEQLMRASAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAV 441
S+E + E +G G+ G YKA N L +V +K+ + + + + +
Sbjct: 3 SMENFQKV--EKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 58
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
L+HPN+V + + + +++++ + L + S ++ PL +
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QL 114
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKA 558
QGLA+ H + ++H +LK N+L+ + +L D+ T+ Y+A
Sbjct: 115 LQGLAFCH-SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLT 586
PEI + ++ D+++ G + E++T
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 39/230 (16%)
Query: 387 EQLMRASAEL-LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSA------EAFE-QHM 438
E++ A+ +L LGRGS G V R + +T A E F + +
Sbjct: 90 EEVHWATHQLRLGRGSFGE-------------VHRMEDKQTGFQCAVKKVRLEVFRAEEL 136
Query: 439 EAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSI-RAKPLHWTSCLKI 497
A GL+ P +VP+ + + + GSL L+ + + L++
Sbjct: 137 MACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG---- 192
Query: 498 AEDVAQGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDY----CXX----XXXXXXXX 548
+GL Y+H + ++HG++K+ NVLL +D A L D+ C
Sbjct: 193 --QALEGLEYLH-SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGD 249
Query: 549 XXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP 598
P T + APE+ R +K DV++ ++L +L G HP + P
Sbjct: 250 YIPGTETHMAPEV-VLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP 298
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 108/281 (38%), Gaps = 37/281 (13%)
Query: 397 LGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS-HPNL 449
LG G+ G +A D L V VK + AD EA ++ + L H N+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK-EALMSELKIMSHLGQHENI 112
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSR----SIRAKPLH-------WTSCLKIA 498
V + G LVI +Y G L N + R P H L +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFS 172
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----- 553
VAQG+A++ + IH ++ + NVLL A++ D+
Sbjct: 173 SQVAQGMAFLASKN-CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 231
Query: 554 VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMR-VDD 612
V + APE T +SDV+++G+LL E+ + +PY P +L + + V D
Sbjct: 232 VKWMAPESIFDCVY-TVQSDVWSYGILLWEIFS---LGLNPY---PGILVNSKFYKLVKD 284
Query: 613 GREENRLGM----LTEVASVCSLKSPEQRPAMWQVLKMIQE 649
G + + + + C P RP Q+ +QE
Sbjct: 285 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 325
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 6 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 119
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 15/204 (7%)
Query: 396 LLGRGSIGTTY----KAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
+LG+GS G K + + + +K+ + D E+ + A+ G P L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-KPPFLTQ 85
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ + FQ + +Y G L + H + R K H + A ++A GL ++ ++
Sbjct: 86 LHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPH---AVFYAAEIAIGLFFL-QS 139
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDY--CXXXX-XXXXXXXXPDTVAYKAPEIRKSSRRA 568
+I+ +LK NV+L ++ ++ D+ C T Y APEI
Sbjct: 140 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYG 199
Query: 569 TSKSDVYAFGVLLLELLTGKHPSQ 592
S D +AFGVLL E+L G+ P +
Sbjct: 200 KS-VDWWAFGVLLYEMLAGQAPFE 222
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 385 SLEQLMRASAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAV 441
S+E + E +G G+ G YKA N L +V +K+ + + + + +
Sbjct: 4 SMENFQKV--EKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
L+HPN+V + + + +++++ + L + S ++ PL +
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDAS-ALTGIPLPLIKSYLF--QL 115
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKA 558
QGLA+ H + ++H +LK N+L+ + +L D+ T+ Y+A
Sbjct: 116 LQGLAFCH-SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLT 586
PEI + ++ D+++ G + E++T
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 7 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 120
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 10 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 123
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 124 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 9 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 122
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 123 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 182 YYSTAVDIWSLGCIFAEMVT 201
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI-AEDVA 502
L HP V + FQ + Y NG L I S +C + ++
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIV 139
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXX-----XXXXXXXXXPDTVAYK 557
L Y+H +IH +LK N+LL D ++TD+ T Y
Sbjct: 140 SALEYLH-GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 198
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+PE+ + + A SD++A G ++ +L+ G P
Sbjct: 199 SPELL-TEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 385 SLEQLMRASAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAV 441
S+E + E +G G+ G YKA N L +V +K+ + + + + +
Sbjct: 1 SMENFQKV--EKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
L+HPN+V + + + +++++ + L + S ++ PL +
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QL 112
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKA 558
QGLA+ H + ++H +LK N+L+ + +L D+ T+ Y+A
Sbjct: 113 LQGLAFCH-SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLT 586
PEI + ++ D+++ G + E++T
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 385 SLEQLMRASAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAV 441
S+E + E +G G+ G YKA N L +V +K+ + + + + +
Sbjct: 2 SMENFQKV--EKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
L+HPN+V + + + +++++ + L + S ++ PL +
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QL 113
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKA 558
QGLA+ H + ++H +LK N+L+ + +L D+ T+ Y+A
Sbjct: 114 LQGLAFCH-SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLT 586
PEI + ++ D+++ G + E++T
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 7 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 120
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 6 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 119
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 6 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 119
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 7 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 120
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 18/216 (8%)
Query: 388 QLMRASAEL---LGRGSIGTTYKAVL---DNHLIVTVKRFDANKTADTSAEAFEQHMEAV 441
++ R EL +G G G ++ + +N + + N T+D+ E F Q +
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
HP++V + + +I + G L + + +R L S + A +
Sbjct: 446 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQL 500
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT----VAYK 557
+ LAY+ + +H ++ + NVL+ ++ +L D+ + +
Sbjct: 501 STALAYLE-SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 559
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQ 592
APE + RR TS SDV+ FGV + E+L G P Q
Sbjct: 560 APE-SINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
+G GS G A V + +V VK+ D K E + + H N+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNS 94
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ E V+ ++ G+L +++ +R ++ + V Q L+ +H A +I
Sbjct: 95 YLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLH-AQGVI 147
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATSKS 572
H ++KS ++LL D +L+D+ V + APE+ S +
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL-ISRLPYGPEV 206
Query: 573 DVYAFGVLLLELLTGKHP 590
D+++ G++++E++ G+ P
Sbjct: 207 DIWSLGIMVIEMVDGEPP 224
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 6 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 119
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKR--FDANKT-----ADTSAEAFEQHMEAVGGLSHP 447
+++G G G V HL + KR F A KT + F +G HP
Sbjct: 39 QVIGAGEFG----EVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHP 94
Query: 448 NLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT--SCLKIAEDVAQGL 505
N++ + ++I ++ NGSL + +R +T + + +A G+
Sbjct: 95 NVIHLEGVVTKSTPVMIITEFMENGSLDSF------LRQNDGQFTVIQLVGMLRGIAAGM 148
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--------YK 557
Y+ ++ +H +L + N+L+ ++ +++D+ T A +
Sbjct: 149 KYLADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 207
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLT-GKHP 590
APE + R+ TS SDV+++G+++ E+++ G+ P
Sbjct: 208 APEAIQ-YRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 39/230 (16%)
Query: 387 EQLMRASAEL-LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSA------EAFE-QHM 438
E++ A+ +L LGRGS G V R + +T A E F + +
Sbjct: 71 EEVHWATHQLRLGRGSFGE-------------VHRMEDKQTGFQCAVKKVRLEVFRAEEL 117
Query: 439 EAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSI-RAKPLHWTSCLKI 497
A GL+ P +VP+ + + + GSL L+ + + L++
Sbjct: 118 MACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG---- 173
Query: 498 AEDVAQGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDY----CXX----XXXXXXXX 548
+GL Y+H + ++HG++K+ NVLL +D A L D+ C
Sbjct: 174 --QALEGLEYLH-SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGD 230
Query: 549 XXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP 598
P T + APE+ R +K DV++ ++L +L G HP + P
Sbjct: 231 YIPGTETHMAPEV-VLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP 279
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
+G GS G A V + +V VK+ D K E + + H N+V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNS 96
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ E V+ ++ G+L +++ +R ++ + V Q L+ +H A +I
Sbjct: 97 YLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLH-AQGVI 149
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATSKS 572
H ++KS ++LL D +L+D+ V + APE+ S +
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL-ISRLPYGPEV 208
Query: 573 DVYAFGVLLLELLTGKHP 590
D+++ G++++E++ G+ P
Sbjct: 209 DIWSLGIMVIEMVDGEPP 226
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 395 ELLGRGSIGTTYKAVLD----NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
E++G G G + L V +K T E F +G HPN++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE-FLSEASIMGQFEHPNII 80
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ +++ ++ NG+L + + + + + +A G+ Y+
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLR----LNDGQFTVIQLVGMLRGIASGMRYLAE 136
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT--------VAYKAPEIR 562
S+ +H +L + N+L+ ++ +++D+ +T + + APE
Sbjct: 137 MSY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA- 194
Query: 563 KSSRRATSKSDVYAFGVLLLELLT-GKHP 590
+ R+ TS SD +++G+++ E+++ G+ P
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 8 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 121
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 122 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT 200
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
+G GS G A V + +V VK+ D K E + + H N+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNS 216
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ E V+ ++ G+L +++ +R ++ + V Q L+ +H A +I
Sbjct: 217 YLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLH-AQGVI 269
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATSKS 572
H ++KS ++LL D +L+D+ V + APE+ S +
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL-ISRLPYGPEV 328
Query: 573 DVYAFGVLLLELLTGKHP 590
D+++ G++++E++ G+ P
Sbjct: 329 DIWSLGIMVIEMVDGEPP 346
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
+G GS G A V + +V VK+ D K E + + H N+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNS 139
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ E V+ ++ G+L +++ +R ++ + V Q L+ +H A +I
Sbjct: 140 YLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLH-AQGVI 192
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATSKS 572
H ++KS ++LL D +L+D+ V + APE+ S +
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL-ISRLPYGPEV 251
Query: 573 DVYAFGVLLLELLTGKHP 590
D+++ G++++E++ G+ P
Sbjct: 252 DIWSLGIMVIEMVDGEPP 269
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 385 SLEQLMRASAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAV 441
S+E + E +G G+ G YKA N L +V +K+ + + + + +
Sbjct: 4 SMENFQKV--EKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
L+HPN+V + + + +++++ + L + S ++ PL +
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDAS-ALTGIPLPLIKSYLF--QL 115
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKA 558
QGLA+ H + ++H +LK N+L+ + +L D+ T+ Y+A
Sbjct: 116 LQGLAFCH-SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLT 586
PEI + ++ D+++ G + E++T
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 7 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 120
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 7 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 120
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 396 LLGRGSIG----TTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
+LG+GS G + K + + + +K+ + D E+ + A+ G P L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-KPPFLTQ 406
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ + FQ + +Y G L + H + R K H + A ++A GL ++ ++
Sbjct: 407 LHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPH---AVFYAAEIAIGLFFL-QS 460
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDY--CXXXX-XXXXXXXXPDTVAYKAPEIRKSSRRA 568
+I+ +LK NV+L ++ ++ D+ C T Y APEI
Sbjct: 461 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYG 520
Query: 569 TSKSDVYAFGVLLLELLTGKHP 590
S D +AFGVLL E+L G+ P
Sbjct: 521 KS-VDWWAFGVLLYEMLAGQAP 541
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 385 SLEQLMRASAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAV 441
S+E + E +G G+ G YKA N L +V +K+ + + + + +
Sbjct: 2 SMENFQKV--EKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
Query: 442 GGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDV 501
L+HPN+V + + + +++++ + L + S ++ PL +
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QL 113
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKA 558
QGLA+ H + ++H +LK N+L+ + +L D+ T+ Y+A
Sbjct: 114 LQGLAFCH-SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 172
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLT 586
PEI + ++ D+++ G + E++T
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 13/199 (6%)
Query: 394 AELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+V
Sbjct: 8 VEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH- 120
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSRR 567
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 568 ATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 181 YSTAVDIWSLGCIFAEMVT 199
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 8 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 121
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 122 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 13/199 (6%)
Query: 394 AELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+V
Sbjct: 11 VEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 68
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 69 KLLDVIHTENKLYLVFEFL-SMDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH- 123
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSRR 567
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 124 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 568 ATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 184 YSTAVDIWSLGCIFAEMVT 202
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 23/219 (10%)
Query: 384 YSLEQLMRASAELLGRGSIGTTYKAV-LDNHLIVTVKRF---DANKTADTSAE-AFEQHM 438
Y E +LG+G+ G Y L N + + +K D+ + E A +H
Sbjct: 3 YDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH- 61
Query: 439 EAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPL--HWTSCLK 496
L H N+V F G + + P GSL L+ RS + PL + +
Sbjct: 62 -----LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALL---RS-KWGPLKDNEQTIGF 112
Query: 497 IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEA-RLTDYCXXXXXXXX---XXXXPD 552
+ + +GL Y+H + ++H ++K NVL+ +++D+
Sbjct: 113 YTKQILEGLKYLHD-NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTG 171
Query: 553 TVAYKAPEIRKSSRRATSKS-DVYAFGVLLLELLTGKHP 590
T+ Y APEI R K+ D+++ G ++E+ TGK P
Sbjct: 172 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 13/199 (6%)
Query: 394 AELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+V
Sbjct: 9 VEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 66
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 67 KLLDVIHTENKLYLVFEFL-SMDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH- 121
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSRR 567
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 568 ATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 182 YSTAVDIWSLGCIFAEMVT 200
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
+G GS G A V + +V VK+ D K E + + H N+V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNS 85
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ E V+ ++ G+L +++ +R ++ + V Q L+ +H A +I
Sbjct: 86 YLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLH-AQGVI 138
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATSKS 572
H ++KS ++LL D +L+D+ V + APE+ S +
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL-ISRLPYGPEV 197
Query: 573 DVYAFGVLLLELLTGKHP 590
D+++ G++++E++ G+ P
Sbjct: 198 DIWSLGIMVIEMVDGEPP 215
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 103/257 (40%), Gaps = 32/257 (12%)
Query: 416 VTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474
V VK ++ T D S E M + G H N++ + G VI +Y G+L
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNL 162
Query: 475 FNLIHGSR----SIRAKPLH----------WTSCLKIAEDVAQGLAYIHRASWLIHGNLK 520
+ R P H SC A VA+G+ Y+ IH +L
Sbjct: 163 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC---AYQVARGMEYLASKK-CIHRDLA 218
Query: 521 SSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKAPEIRKSSRRATSKSDVY 575
+ NVL+ D ++ D+ T V + APE R T +SDV+
Sbjct: 219 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-FDRIYTHQSDVW 277
Query: 576 AFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKS 633
+FGVLL E+ T G P +P + ++ + ++ R+D + N L + C
Sbjct: 278 SFGVLLWEIFTLGGSP--YPGVPVEELFKLLKEGHRMD--KPSNCTNELYMMMRDCWHAV 333
Query: 634 PEQRPAMWQVLKMIQEI 650
P QRP Q+++ + I
Sbjct: 334 PSQRPTFKQLVEDLDRI 350
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 6 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEHV-HQDLKTFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 119
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 82/195 (42%), Gaps = 13/195 (6%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G+ G YKA + + K+ + E + +E + HP +V + +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
G+ ++ ++ P G++ ++ +P C ++ E L ++H +IH
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE----ALNFLHSKR-IIH 132
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATS--- 570
+LK+ NVL+ + + RL D+ + + APE+ +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 192
Query: 571 -KSDVYAFGVLLLEL 584
K+D+++ G+ L+E+
Sbjct: 193 YKADIWSLGITLIEM 207
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
+G GS G A V + +V VK+ D K E + + H N+V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNS 89
Query: 456 FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ E V+ ++ G+L +++ +R ++ + V Q L+ +H A +I
Sbjct: 90 YLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLH-AQGVI 142
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATSKS 572
H ++KS ++LL D +L+D+ V + APE+ S +
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL-ISRLPYGPEV 201
Query: 573 DVYAFGVLLLELLTGKHP 590
D+++ G++++E++ G+ P
Sbjct: 202 DIWSLGIMVIEMVDGEPP 219
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 105/257 (40%), Gaps = 32/257 (12%)
Query: 416 VTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474
V VK ++ T D S E M + G H N++ + G VI +Y G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 475 FNLIHGSR----SIRAKPLH----------WTSCLKIAEDVAQGLAYIHRASWLIHGNLK 520
+ R P H SC A VA+G+ Y+ IH +L
Sbjct: 122 REYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC---AYQVARGMEYLASKK-CIHRDLA 177
Query: 521 SSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKAPEIRKSSRRATSKSDVY 575
+ NVL+ D ++ D+ T V + APE R T +SDV+
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEAL-FDRIYTHQSDVW 236
Query: 576 AFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKS 633
+FGVLL E+ T G P +P + ++ + ++ R+D + N L + C
Sbjct: 237 SFGVLLWEIFTLGGSP--YPGVPVEELFKLLKEGHRMD--KPSNCTNELYMMMRDCWHAV 292
Query: 634 PEQRPAMWQVLKMIQEI 650
P QRP Q+++ + I
Sbjct: 293 PSQRPTFKQLVEDLDRI 309
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 441 VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT--SCLKIA 498
+G HPN++ + +++ + NGSL + + R +T + +
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL------RKHDAQFTVIQLVGML 124
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKA 558
+A G+ Y+ + +H +L + N+L+ ++ +++D+ T K
Sbjct: 125 RGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 559 PEIRKSS------RRATSKSDVYAFGVLLLELLT-GKHP 590
P IR +S R+ TS SDV+++G++L E+++ G+ P
Sbjct: 184 P-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 82/195 (42%), Gaps = 13/195 (6%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456
LG G+ G YKA + + K+ + E + +E + HP +V + +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
G+ ++ ++ P G++ ++ +P C ++ E L ++H +IH
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE----ALNFLHSKR-IIH 140
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATS--- 570
+LK+ NVL+ + + RL D+ + + APE+ +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 200
Query: 571 -KSDVYAFGVLLLEL 584
K+D+++ G+ L+E+
Sbjct: 201 YKADIWSLGITLIEM 215
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 15/203 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG+G+ + V L K + K + + E+ L HPN+V +
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 454 AYFQAKGERLVIYDYQPNGSLF-NLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
Q + +++D G LF +++ A H C+ + + + +AY H ++
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CI---QQILESIAYCH-SN 147
Query: 513 WLIHGNLKSSNVLLGADFEA---RLTDY--CXXXXXXXXXXXXPDTVAYKAPEIRKSSRR 567
++H NLK N+LL + + +L D+ T Y +PE+ K
Sbjct: 148 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 207
Query: 568 ATSKSDVYAFGVLLLELLTGKHP 590
+ D++A GV+L LL G P
Sbjct: 208 -SKPVDIWACGVILYILLVGYPP 229
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 15/203 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG+G+ + V L K + K + + E+ L HPN+V +
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 454 AYFQAKGERLVIYDYQPNGSLF-NLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
Q + +++D G LF +++ A H C+ + + + +AY H ++
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CI---QQILESIAYCH-SN 124
Query: 513 WLIHGNLKSSNVLLGADFEA---RLTDY--CXXXXXXXXXXXXPDTVAYKAPEIRKSSRR 567
++H NLK N+LL + + +L D+ T Y +PE+ K
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 568 ATSKSDVYAFGVLLLELLTGKHP 590
+ D++A GV+L LL G P
Sbjct: 185 -SKPVDIWACGVILYILLVGYPP 206
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V +K+ + + + + + L+HPN+
Sbjct: 7 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGL++ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLSFCH 120
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 15/203 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG+G+ + V L K + K + + E+ L HPN+V +
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 454 AYFQAKGERLVIYDYQPNGSLF-NLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
Q + +++D G LF +++ A H C+ + + + +AY H ++
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CI---QQILESIAYCH-SN 124
Query: 513 WLIHGNLKSSNVLLGADFEA---RLTDY--CXXXXXXXXXXXXPDTVAYKAPEIRKSSRR 567
++H NLK N+LL + + +L D+ T Y +PE+ K
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 568 ATSKSDVYAFGVLLLELLTGKHP 590
+ D++A GV+L LL G P
Sbjct: 185 -SKPVDIWACGVILYILLVGYPP 206
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 441 VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT--SCLKIA 498
+G HPN++ + +++ + NGSL + + R +T + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL------RKHDAQFTVIQLVGML 153
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKA 558
+A G+ Y+ + +H +L + N+L+ ++ +++D+ T K
Sbjct: 154 RGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 559 PEIRKSS------RRATSKSDVYAFGVLLLELLT-GKHP 590
P IR +S R+ TS SDV+++G++L E+++ G+ P
Sbjct: 213 P-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 103/257 (40%), Gaps = 32/257 (12%)
Query: 416 VTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474
V VK ++ T D S E M + G H N++ + G VI +Y G+L
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNL 113
Query: 475 FNLIHGSR----SIRAKPLH----------WTSCLKIAEDVAQGLAYIHRASWLIHGNLK 520
+ R P H SC A VA+G+ Y+ IH +L
Sbjct: 114 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC---AYQVARGMEYLASKK-CIHRDLA 169
Query: 521 SSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKAPEIRKSSRRATSKSDVY 575
+ NVL+ D ++ D+ T V + APE R T +SDV+
Sbjct: 170 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-FDRIYTHQSDVW 228
Query: 576 AFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKS 633
+FGVLL E+ T G P +P + ++ + ++ R+D + N L + C
Sbjct: 229 SFGVLLWEIFTLGGSP--YPGVPVEELFKLLKEGHRMD--KPSNCTNELYMMMRDCWHAV 284
Query: 634 PEQRPAMWQVLKMIQEI 650
P QRP Q+++ + I
Sbjct: 285 PSQRPTFKQLVEDLDRI 301
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 103/257 (40%), Gaps = 32/257 (12%)
Query: 416 VTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474
V VK ++ T D S E M + G H N++ + G VI +Y G+L
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNL 114
Query: 475 FNLIHGSR----SIRAKPLH----------WTSCLKIAEDVAQGLAYIHRASWLIHGNLK 520
+ R P H SC A VA+G+ Y+ IH +L
Sbjct: 115 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC---AYQVARGMEYLASKK-CIHRDLA 170
Query: 521 SSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKAPEIRKSSRRATSKSDVY 575
+ NVL+ D ++ D+ T V + APE R T +SDV+
Sbjct: 171 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-FDRIYTHQSDVW 229
Query: 576 AFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKS 633
+FGVLL E+ T G P +P + ++ + ++ R+D + N L + C
Sbjct: 230 SFGVLLWEIFTLGGSP--YPGVPVEELFKLLKEGHRMD--KPSNCTNELYMMMRDCWHAV 285
Query: 634 PEQRPAMWQVLKMIQEI 650
P QRP Q+++ + I
Sbjct: 286 PSQRPTFKQLVEDLDRI 302
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 103/257 (40%), Gaps = 32/257 (12%)
Query: 416 VTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474
V VK ++ T D S E M + G H N++ + G VI +Y G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 475 FNLIHGSR----SIRAKPLH----------WTSCLKIAEDVAQGLAYIHRASWLIHGNLK 520
+ R P H SC A VA+G+ Y+ IH +L
Sbjct: 122 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC---AYQVARGMEYLASKK-CIHRDLA 177
Query: 521 SSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKAPEIRKSSRRATSKSDVY 575
+ NVL+ D ++ D+ T V + APE R T +SDV+
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-FDRIYTHQSDVW 236
Query: 576 AFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKS 633
+FGVLL E+ T G P +P + ++ + ++ R+D + N L + C
Sbjct: 237 SFGVLLWEIFTLGGSP--YPGVPVEELFKLLKEGHRMD--KPSNCTNELYMMMRDCWHAV 292
Query: 634 PEQRPAMWQVLKMIQEI 650
P QRP Q+++ + I
Sbjct: 293 PSQRPTFKQLVEDLDRI 309
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 15/203 (7%)
Query: 395 ELLGRGSIGTTYKAVLDNH-LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG+G+ + V L K + K + + E+ L HPN+V +
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 454 AYFQAKGERLVIYDYQPNGSLF-NLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
Q + +++D G LF +++ A H C+ + + + +AY H ++
Sbjct: 71 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CI---QQILESIAYCH-SN 123
Query: 513 WLIHGNLKSSNVLLGADFEA---RLTDY--CXXXXXXXXXXXXPDTVAYKAPEIRKSSRR 567
++H NLK N+LL + + +L D+ T Y +PE+ K
Sbjct: 124 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 183
Query: 568 ATSKSDVYAFGVLLLELLTGKHP 590
+ D++A GV+L LL G P
Sbjct: 184 -SKPVDIWACGVILYILLVGYPP 205
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/209 (18%), Positives = 87/209 (41%), Gaps = 20/209 (9%)
Query: 395 ELLGRGSIGTTYKAVLD----NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
E++G G G + L V +K T E F +G HPN++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE-FLSEASIMGQFEHPNII 78
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ +++ ++ NG+L + + + + + +A G+ Y+
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLR----LNDGQFTVIQLVGMLRGIASGMRYLAE 134
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT--------VAYKAPEIR 562
S+ +H +L + N+L+ ++ +++D+ T + + APE
Sbjct: 135 MSY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA- 192
Query: 563 KSSRRATSKSDVYAFGVLLLELLT-GKHP 590
+ R+ TS SD +++G+++ E+++ G+ P
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 93/214 (43%), Gaps = 30/214 (14%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKR--FDANKT-----ADTSAEAFEQHMEAVGGLSHP 447
+++G G G V HL + KR F A KT + F +G HP
Sbjct: 13 QVIGAGEFG----EVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHP 68
Query: 448 NLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT--SCLKIAEDVAQGL 505
N++ + ++I ++ NGSL + +R +T + + +A G+
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSLDSF------LRQNDGQFTVIQLVGMLRGIAAGM 122
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--------YK 557
Y+ ++ +H L + N+L+ ++ +++D+ T A +
Sbjct: 123 KYLADMNY-VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 181
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLT-GKHP 590
APE + R+ TS SDV+++G+++ E+++ G+ P
Sbjct: 182 APEAIQ-YRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 103/257 (40%), Gaps = 32/257 (12%)
Query: 416 VTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474
V VK ++ T D S E M + G H N++ + G VI +Y G+L
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNL 110
Query: 475 FNLIHGSR----SIRAKPLH----------WTSCLKIAEDVAQGLAYIHRASWLIHGNLK 520
+ R P H SC A VA+G+ Y+ IH +L
Sbjct: 111 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC---AYQVARGMEYLASKK-CIHRDLA 166
Query: 521 SSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKAPEIRKSSRRATSKSDVY 575
+ NVL+ D ++ D+ T V + APE R T +SDV+
Sbjct: 167 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-FDRIYTHQSDVW 225
Query: 576 AFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKS 633
+FGVLL E+ T G P +P + ++ + ++ R+D + N L + C
Sbjct: 226 SFGVLLWEIFTLGGSP--YPGVPVEELFKLLKEGHRMD--KPSNCTNELYMMMRDCWHAV 281
Query: 634 PEQRPAMWQVLKMIQEI 650
P QRP Q+++ + I
Sbjct: 282 PSQRPTFKQLVEDLDRI 298
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 85/218 (38%), Gaps = 36/218 (16%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSA------EAFE-QHMEAVGGLSHPNL 449
LGRGS G V R +T A E F + + A GLS P +
Sbjct: 80 LGRGSFGE-------------VHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRI 126
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
VP+ + + + GSL LI + + P L +GL Y+H
Sbjct: 127 VPLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPE--DRALYYLGQALEGLEYLH 181
Query: 510 RASWLIHGNLKSSNVLLGADF-EARLTDY----CXX----XXXXXXXXXXPDTVAYKAPE 560
++HG++K+ NVLL +D A L D+ C P T + APE
Sbjct: 182 TRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 240
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP 598
+ + +K D+++ ++L +L G HP + P
Sbjct: 241 V-VMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 277
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 397 LGRGSIGTTYKAVLDNHLI----VTVKRFDANKTADTSAEA-FEQHMEAVGGLSHPNLVP 451
LG GS G K L H V +K + A + + E+ + + L HP+++
Sbjct: 22 LGEGSFG---KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ ++K E +++ +Y N LF+ I ++ + + + + + Y HR
Sbjct: 79 LYDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRDKMSEQEARRFFQQIISAVEYCHRH 132
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRAT 569
++H +LK N+LL ++ D+ + Y APE+ A
Sbjct: 133 K-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 191
Query: 570 SKSDVYAFGVLLLELLTGKHP 590
+ DV++ GV+L +L + P
Sbjct: 192 PEVDVWSCGVILYVMLCRRLP 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 397 LGRGSIGTTYKAVLDNHLI----VTVKRFDANKTADTSAEA-FEQHMEAVGGLSHPNLVP 451
LG GS G K L H V +K + A + + E+ + + L HP+++
Sbjct: 12 LGEGSFG---KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ ++K E +++ +Y N LF+ I ++ + + + + + Y HR
Sbjct: 69 LYDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRDKMSEQEARRFFQQIISAVEYCHRH 122
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRAT 569
++H +LK N+LL ++ D+ + Y APE+ A
Sbjct: 123 K-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 181
Query: 570 SKSDVYAFGVLLLELLTGKHP 590
+ DV++ GV+L +L + P
Sbjct: 182 PEVDVWSCGVILYVMLCRRLP 202
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 36/259 (13%)
Query: 416 VTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474
V VK ++ T D S E M + G H N++ + G VI +Y G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 475 FNLIHGSR----------------SIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGN 518
+ R + +K L SC A VA+G+ Y+ IH +
Sbjct: 122 REYLQARRPPGLEYCYNPSHNPEEQLSSKDL--VSC---AYQVARGMEYLASKK-CIHRD 175
Query: 519 LKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKAPEIRKSSRRATSKSD 573
L + NVL+ D ++ D+ T V + APE R T +SD
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-FDRIYTHQSD 234
Query: 574 VYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSL 631
V++FGVLL E+ T G P +P + ++ + ++ R+D + N L + C
Sbjct: 235 VWSFGVLLWEIFTLGGSP--YPGVPVEELFKLLKEGHRMD--KPSNCTNELYMMMRDCWH 290
Query: 632 KSPEQRPAMWQVLKMIQEI 650
P QRP Q+++ + I
Sbjct: 291 AVPSQRPTFKQLVEDLDRI 309
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 36/259 (13%)
Query: 416 VTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474
V VK ++ T D S E M + G H N++ + G VI +Y G+L
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNL 106
Query: 475 FNLIHGSR----------------SIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGN 518
+ R + +K L SC A VA+G+ Y+ IH +
Sbjct: 107 REYLQARRPPGLEYCYNPSHNPEEQLSSKDL--VSC---AYQVARGMEYLASKK-CIHRD 160
Query: 519 LKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKAPEIRKSSRRATSKSD 573
L + NVL+ D ++ D+ T V + APE R T +SD
Sbjct: 161 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-FDRIYTHQSD 219
Query: 574 VYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSL 631
V++FGVLL E+ T G P +P + ++ + ++ R+D + N L + C
Sbjct: 220 VWSFGVLLWEIFTLGGSP--YPGVPVEELFKLLKEGHRMD--KPSNCTNELYMMMRDCWH 275
Query: 632 KSPEQRPAMWQVLKMIQEI 650
P QRP Q+++ + I
Sbjct: 276 AVPSQRPTFKQLVEDLDRI 294
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 397 LGRGSIGTTYKAVLDNHLI----VTVKRFDANKTADTSAEA-FEQHMEAVGGLSHPNLVP 451
LG GS G K L H V +K + A + + E+ + + L HP+++
Sbjct: 21 LGEGSFG---KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ ++K E +++ +Y N LF+ I ++ + + + + + Y HR
Sbjct: 78 LYDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRDKMSEQEARRFFQQIISAVEYCHRH 131
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRAT 569
++H +LK N+LL ++ D+ + Y APE+ A
Sbjct: 132 K-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 190
Query: 570 SKSDVYAFGVLLLELLTGKHP 590
+ DV++ GV+L +L + P
Sbjct: 191 PEVDVWSCGVILYVMLCRRLP 211
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 397 LGRGSIGTTYKAVLDNHLI----VTVKRFDANKTADTSAEA-FEQHMEAVGGLSHPNLVP 451
LG GS G K L H V +K + A + + E+ + + L HP+++
Sbjct: 16 LGEGSFG---KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ ++K E +++ +Y N LF+ I ++ + + + + + Y HR
Sbjct: 73 LYDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRDKMSEQEARRFFQQIISAVEYCHRH 126
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRAT 569
++H +LK N+LL ++ D+ + Y APE+ A
Sbjct: 127 K-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 185
Query: 570 SKSDVYAFGVLLLELLTGKHP 590
+ DV++ GV+L +L + P
Sbjct: 186 PEVDVWSCGVILYVMLCRRLP 206
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 30/231 (12%)
Query: 379 GESEVYSLEQLMRASAELLGRGSIGTTYKAVLD-----NHLIVTVKRFDANKTA---DTS 430
G EVY +L+ + LG G+ GT K + V + + +AN A +
Sbjct: 1 GPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL 60
Query: 431 AEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLH 490
AEA + L +P +V + +A+ LV+ + G L + +R ++ K +
Sbjct: 61 AEA-----NVMQQLDNPYIVRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNI- 113
Query: 491 WTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXX 550
+++ V+ G+ Y+ ++ +H +L + NVLL A+++D+
Sbjct: 114 ----IELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 168
Query: 551 PDT------VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY 595
V + APE + + +SKSDV++FGVL+ E + Q PY
Sbjct: 169 KAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFS---YGQKPY 215
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 87/200 (43%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V + + + + + + + L+HPN+
Sbjct: 7 KVEKIGEGTYGVVYKA--RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 120
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 87/200 (43%), Gaps = 13/200 (6%)
Query: 393 SAELLGRGSIGTTYKAVLDNHL---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL 449
E +G G+ G YKA N L +V + + + + + + + L+HPN+
Sbjct: 6 KVEKIGEGTYGVVYKA--RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
V + + + +++++ + L + S ++ PL + QGLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPLIKSYLF--QLLQGLAFCH 119
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSR 566
+ ++H +LK N+L+ + +L D+ T+ Y+APEI +
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 567 RATSKSDVYAFGVLLLELLT 586
++ D+++ G + E++T
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 30/231 (12%)
Query: 379 GESEVYSLEQLMRASAELLGRGSIGTTYKAVLD-----NHLIVTVKRFDANKTA---DTS 430
G EVY +L+ + LG G+ GT K + V + + +AN A +
Sbjct: 1 GPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL 60
Query: 431 AEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLH 490
AEA + L +P +V + +A+ LV+ + G L + +R ++ K +
Sbjct: 61 AEA-----NVMQQLDNPYIVRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNI- 113
Query: 491 WTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXX 550
+++ V+ G+ Y+ ++ +H +L + NVLL A+++D+
Sbjct: 114 ----IELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY 168
Query: 551 PDT------VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY 595
V + APE + + +SKSDV++FGVL+ E + Q PY
Sbjct: 169 KAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFS---YGQKPY 215
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 416 VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLF 475
V +K A T + F +G HPN++ + +++ +Y NGSL
Sbjct: 80 VAIKALKAGYT-ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 476 NLIHGSRSIRAKPLHWT--SCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEAR 533
+R +T + + V G+ Y+ + +H +L + NVL+ ++ +
Sbjct: 139 TF------LRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY-VHRDLAARNVLVDSNLVCK 191
Query: 534 LTDYCXXXXXXXXXXXXPDTVAYKAPEIRKSS------RRATSKSDVYAFGVLLLELLT- 586
++D+ T K P IR ++ R +S SDV++FGV++ E+L
Sbjct: 192 VSDFGLSRVLEDDPDAAXTTTGGKIP-IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAY 250
Query: 587 GKHP 590
G+ P
Sbjct: 251 GERP 254
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 441 VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT--SCLKIA 498
+G HPN++ + +++ + NGSL + + R +T + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL------RKHDAQFTVIQLVGML 153
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKA 558
+A G+ Y+ +H +L + N+L+ ++ +++D+ T K
Sbjct: 154 RGIASGMKYLSDMG-AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 559 PEIRKSS------RRATSKSDVYAFGVLLLELLT-GKHP 590
P IR +S R+ TS SDV+++G++L E+++ G+ P
Sbjct: 213 P-IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 59/155 (38%), Gaps = 10/155 (6%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
L HPN+V + ++ +Y G LF R A + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELF-----ERICNAGRFSEDEARFFFQQLIS 126
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP-DTV---AYKAP 559
G++Y H A + H +LK N LL RL P DTV AY AP
Sbjct: 127 GVSYCH-AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAP 185
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
E+ +DV++ GV L +L G +P + P
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP 220
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 133 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTXDLKICDF------GLARVADPDHDHTGFLT 185
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 137 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTXDLKICDF------GLARVADPDHDHTGFLT 189
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 441 VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAED 500
+G HPN++ + +++ +Y NGSL + + + +
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDG----QFTVIQLVGMLRG 132
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKAPE 560
++ G+ Y+ + +H +L + N+L+ ++ +++D+ T K P
Sbjct: 133 ISAGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP- 190
Query: 561 IRKSS------RRATSKSDVYAFGVLLLELLT-GKHP 590
IR ++ R+ TS SDV+++G+++ E+++ G+ P
Sbjct: 191 IRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 137 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDF------GLARVADPDHDHTGFLT 189
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 13/163 (7%)
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAK-PLHWTS 493
++ G L P++VPI + + G+ V + L N + + +R + PL
Sbjct: 82 QREARTAGRLQEPHVVPIHDFGEIDGQLYV------DXRLINGVDLAAXLRRQGPLAPPR 135
Query: 494 CLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDY----CXXXXXXXXXXX 549
+ I + A+ H ++K N+L+ AD A L D+
Sbjct: 136 AVAIVRQIGS-ALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN 194
Query: 550 XPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQ 592
T+ Y APE R S AT ++D+YA +L E LTG P Q
Sbjct: 195 TVGTLYYXAPE-RFSESHATYRADIYALTCVLYECLTGSPPYQ 236
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 135 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDF------GLARVADPDHDHTGFLT 187
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 131 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDF------GLARVADPDHDHTGFLT 183
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 137 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDF------GLARVADPDHDHTGFLX 189
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 190 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 138 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDF------GLARVADPDHDHTGFLT 190
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 139 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDF------GLARVADPDHDHTGFLT 191
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 130 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDF------GLARVADPDHDHTGFLT 182
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 137 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDF------GLARVADPDHDHTGFLT 189
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 138 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDF------GLARVADPDHDHTGFLX 190
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 191 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 133 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDF------GLARVADPDHDHTGFLT 185
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 133 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTXDLKICDF------GLARVADPDHDHTGFLT 185
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 131 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDF------GLARVADPDHDHTGFLT 183
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 137 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDF------GLARVADPDHDHTGFLT 189
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 137 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTXDLKICDF------GLARVADPDHDHTGFLT 189
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 135 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDF------GLARVADPDHDHTGFLT 187
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 153 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTXDLKICDF------GLARVADPDHDHTGFLT 205
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 133 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTXDLKIXDF------GLARVADPDHDHTGFLT 185
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 141 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDF------GLARVADPDHDHTGFLT 193
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 133 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDF------GLARVADPDHDHTGFLT 185
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 19/203 (9%)
Query: 397 LGRGSIGTTYKA--VLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LG G + T Y A + N + F + + + + FE+ + LSH N+V +
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 455 YFQAKGERLVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
+ ++ +Y +L I HG PL + + + G+ + H
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHG-------PLSVDTAINFTNQILDGIKHAHDM- 130
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD----TVAYKAPEIRKSSRRA 568
++H ++K N+L+ ++ ++ D+ + TV Y +PE ++ A
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE--QAKGEA 188
Query: 569 TSK-SDVYAFGVLLLELLTGKHP 590
T + +D+Y+ G++L E+L G+ P
Sbjct: 189 TDECTDIYSIGIVLYEMLVGEPP 211
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 153 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDF------GLARVADPDHDHTGFLT 205
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
L+H ++V +F+ V+ + SL L H R +P +
Sbjct: 74 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEP----EARYYLRQIVL 128
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDY---CXXXXXXXXXXXXPDTVAYKAPE 560
G Y+HR + +IH +LK N+ L D E ++ D+ T Y APE
Sbjct: 129 GCQYLHR-NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE 187
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQ 592
+ S + + + DV++ G ++ LL GK P +
Sbjct: 188 VL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/284 (18%), Positives = 112/284 (39%), Gaps = 59/284 (20%)
Query: 396 LLGRGSIGTTYKA--VLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
+LG+G+ G KA LD+ R+ A K + E + V L+ N +
Sbjct: 13 VLGQGAFGQVVKARNALDS-------RYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 454 AYFQAKGER----------------LVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI 497
Y+ A ER + +Y NG+L++LIH + + +W ++
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RL 121
Query: 498 AEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP------ 551
+ + L+YIH + +IH +LK N+ + ++ D+
Sbjct: 122 FRQILEALSYIH-SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 552 -----------DTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY---LA 597
T Y A E+ + K D+Y+ G++ E++ +P+ +
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI-------YPFSTGME 233
Query: 598 PPDMLEWVRTMRVD--DGREENRLGMLTEVASVCSLKSPEQRPA 639
++L+ +R++ ++ ++N++ + ++ + P +RP
Sbjct: 234 RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
L+H ++V +F+ V+ + SL L H R +P +
Sbjct: 72 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEP----EARYYLRQIVL 126
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP---DTVAYKAPE 560
G Y+HR + +IH +LK N+ L D E ++ D+ T Y APE
Sbjct: 127 GCQYLHR-NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE 185
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQ 592
+ S + + + DV++ G ++ LL GK P +
Sbjct: 186 VL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
L+H ++V +F+ V+ + SL L H R +P +
Sbjct: 74 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEP----EARYYLRQIVL 128
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPE 560
G Y+HR + +IH +LK N+ L D E ++ D+ T Y APE
Sbjct: 129 GCQYLHR-NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE 187
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQ 592
+ S + + + DV++ G ++ LL GK P +
Sbjct: 188 VL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 416 VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLF 475
V +K A T + F +G HPN++ + +++ +Y NGSL
Sbjct: 80 VAIKALKAGYT-ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 476 NLIHGSRSIRAKPLHWT--SCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEAR 533
+R +T + + V G+ Y+ + +H +L + NVL+ ++ +
Sbjct: 139 TF------LRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY-VHRDLAARNVLVDSNLVCK 191
Query: 534 LTDYCXXXXXXXXXXXXPDTVAYKAPEIRKSS------RRATSKSDVYAFGVLLLELLT- 586
++D+ T K P IR ++ R +S SDV++FGV++ E+L
Sbjct: 192 VSDFGLSRVLEDDPDAAYTTTGGKIP-IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAY 250
Query: 587 GKHP 590
G+ P
Sbjct: 251 GERP 254
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 12 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEIXINKMLNHENVV 68
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 123
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 124 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 81/204 (39%), Gaps = 15/204 (7%)
Query: 396 LLGRGSIGTTY----KAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
+LG+GS G K D + + +K+ + D E+ + ++ +HP L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA-RNHPFLTQ 88
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ FQ + ++ G L I SR + A ++ L ++H
Sbjct: 89 LFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-----YAAEIISALMFLHDK 143
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDY--CXXXXXX-XXXXXXPDTVAYKAPEIRKSSRRA 568
+I+ +LK NVLL + +L D+ C T Y APEI +
Sbjct: 144 G-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYG 202
Query: 569 TSKSDVYAFGVLLLELLTGKHPSQ 592
+ D +A GVLL E+L G P +
Sbjct: 203 PA-VDWWAMGVLLYEMLCGHAPFE 225
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 10/150 (6%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
L+H ++V +F+ V+ + SL L H R +P +
Sbjct: 78 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEP----EARYYLRQIVL 132
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPE 560
G Y+HR + +IH +LK N+ L D E ++ D+ T Y APE
Sbjct: 133 GCQYLHR-NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE 191
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+ S + + + DV++ G ++ LL GK P
Sbjct: 192 VL-SKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
L+H ++V +F+ V+ + SL L H R +P +
Sbjct: 96 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEP----EARYYLRQIVL 150
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP---DTVAYKAPE 560
G Y+HR + +IH +LK N+ L D E ++ D+ T Y APE
Sbjct: 151 GCQYLHR-NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE 209
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQ 592
+ S + + + DV++ G ++ LL GK P +
Sbjct: 210 VL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD-------- 552
+ +GL YIH A+ ++H +LK SN+LL + ++ D+ PD
Sbjct: 135 ILRGLKYIHSAN-VLHRDLKPSNLLLNTTSDLKICDF------GLARVADPDHDHTGFLT 187
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
T Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEIXINKMLNHENVV 67
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 122
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 123 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 21/221 (9%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVK---RFDAN---KTADTSAEAFEQHMEAVGGLSHPN 448
E LG GS G K L H K +F + K +D E+ + + L HP+
Sbjct: 15 ETLGEGSFG---KVKLATHYKTQQKVALKFISRQLLKKSDMHMRV-EREISYLKLLRHPH 70
Query: 449 LVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYI 508
++ + + +++ +Y G LF+ I + K + + + + + Y
Sbjct: 71 IIKLYDVITTPTDIVMVIEY-AGGELFDYI-----VEKKRMTEDEGRRFFQQIICAIEYC 124
Query: 509 HRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSR 566
HR ++H +LK N+LL + ++ D+ + Y APE+
Sbjct: 125 HRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKL 183
Query: 567 RATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRT 607
A + DV++ G++L +L G+ P ++ P++ + V +
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPFDDEFI--PNLFKKVNS 222
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 36/218 (16%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSA------EAFE-QHMEAVGGLSHPNL 449
+GRGS G V R +T A E F + + A GLS P +
Sbjct: 82 VGRGSFGE-------------VHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRI 128
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
VP+ + + + GSL LI + + P L +GL Y+H
Sbjct: 129 VPLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPE--DRALYYLGQALEGLEYLH 183
Query: 510 RASWLIHGNLKSSNVLLGADF-EARLTDY----CXX----XXXXXXXXXXPDTVAYKAPE 560
++HG++K+ NVLL +D A L D+ C P T + APE
Sbjct: 184 TRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 242
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP 598
+ + +K D+++ ++L +L G HP + P
Sbjct: 243 V-VMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 279
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
L+H ++V +F+ V+ + SL L H R +P +
Sbjct: 98 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEP----EARYYLRQIVL 152
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP---DTVAYKAPE 560
G Y+HR + +IH +LK N+ L D E ++ D+ T Y APE
Sbjct: 153 GCQYLHR-NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE 211
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQ 592
+ S + + + DV++ G ++ LL GK P +
Sbjct: 212 VL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 85/218 (38%), Gaps = 24/218 (11%)
Query: 385 SLEQLMRASAELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTS-------AEAFEQH 437
++++ MR LG+G Y+ + D + K A K S E
Sbjct: 24 TMKRYMRG--RFLGKGGFAKCYE-ITD----MDTKEVFAGKVVPKSMLLKPHQKEKMSTE 76
Query: 438 MEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI 497
+ L +P++V +F+ V+ + SL L H R +P
Sbjct: 77 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP----EARYF 131
Query: 498 AEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TV 554
QG+ Y+H + +IH +LK N+ L D + ++ D+ D T
Sbjct: 132 MRQTIQGVQYLHN-NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP 190
Query: 555 AYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQ 592
Y APE+ + + + D+++ G +L LL GK P +
Sbjct: 191 NYIAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 36/218 (16%)
Query: 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSA------EAFE-QHMEAVGGLSHPNL 449
+GRGS G V R +T A E F + + A GLS P +
Sbjct: 66 VGRGSFGE-------------VHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRI 112
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
VP+ + + + GSL LI + + P L +GL Y+H
Sbjct: 113 VPLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPE--DRALYYLGQALEGLEYLH 167
Query: 510 RASWLIHGNLKSSNVLLGADF-EARLTDY----CXX----XXXXXXXXXXPDTVAYKAPE 560
++HG++K+ NVLL +D A L D+ C P T + APE
Sbjct: 168 TRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 226
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP 598
+ + +K D+++ ++L +L G HP + P
Sbjct: 227 V-VMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 24/206 (11%)
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+R Y QA+ + Y Y P+ + + +K L SC A VA+G+ Y+
Sbjct: 121 LREYLQAREPPGLEYSYNPSHN------PEEQLSSKDL--VSC---AYQVARGMEYLASK 169
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKAPEIRKSSR 566
IH +L + NVL+ D ++ D+ T V + APE R
Sbjct: 170 K-CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL-FDR 227
Query: 567 RATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTE 624
T +SDV++FGVLL E+ T G P +P + ++ + ++ R+D + N L
Sbjct: 228 IYTHQSDVWSFGVLLWEIFTLGGSP--YPGVPVEELFKLLKEGHRMD--KPSNCTNELYM 283
Query: 625 VASVCSLKSPEQRPAMWQVLKMIQEI 650
+ C P QRP Q+++ + I
Sbjct: 284 MMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEIXINKMLNHENVV 67
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 122
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 123 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 498 AEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXXXXXXXXXXXXPDTVA 555
A ++ GL +HR +++ +LK N+LL R++D TV
Sbjct: 292 AAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 556 YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
Y APE+ K+ R T D +A G LL E++ G+ P Q
Sbjct: 351 YMAPEVVKNE-RYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 423 ANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLV--IYDYQPNGSLFNLIHG 480
N AD E +E + L H N+V + G + I ++ P+GSL +
Sbjct: 64 GNHIADLKKE-----IEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK 118
Query: 481 SRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXX 540
+++ ++ LK A + +G+ Y+ + +H +L + NVL+ ++ + ++ D+
Sbjct: 119 NKN----KINLKQQLKYAVQICKGMDYLGSRQY-VHRDLAARNVLVESEHQVKIGDFGLT 173
Query: 541 XXXXXXXX------XXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT 586
V + APE S+ + SDV++FGV L ELLT
Sbjct: 174 KAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIA-SDVWSFGVTLHELLT 224
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 85/207 (41%), Gaps = 33/207 (15%)
Query: 397 LGRGSIGTTYKA---VLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
LG G+ T YK + DN + + R + + A +A + + + L H N+V +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI---REVSLLKDLKHANIVTLH 66
Query: 454 AYFQAKGERLVIYDYQPN---------GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQG 504
+ ++++Y G++ N+ H + + L +G
Sbjct: 67 DIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINM-HNVKLFLFQLL-------------RG 112
Query: 505 LAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEI 561
LAY HR ++H +LK N+L+ E +L D+ + V Y+ P+I
Sbjct: 113 LAYCHRQK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDI 171
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGK 588
S +++ D++ G + E+ TG+
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 19/172 (11%)
Query: 423 ANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLV--IYDYQPNGSLFNLIHG 480
N AD E +E + L H N+V + G + I ++ P+GSL +
Sbjct: 52 GNHIADLKKE-----IEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK 106
Query: 481 SRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXX 540
+++ ++ LK A + +G+ Y+ + +H +L + NVL+ ++ + ++ D+
Sbjct: 107 NKN----KINLKQQLKYAVQICKGMDYLGSRQY-VHRDLAARNVLVESEHQVKIGDFGLT 161
Query: 541 XXXXXXXXXX------PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT 586
V + APE S+ + SDV++FGV L ELLT
Sbjct: 162 KAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIA-SDVWSFGVTLHELLT 212
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 498 AEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXXXXXXXXXXXXPDTVA 555
A ++ GL +HR +++ +LK N+LL R++D TV
Sbjct: 292 AAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 556 YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
Y APE+ K+ R T D +A G LL E++ G+ P Q
Sbjct: 351 YMAPEVVKNE-RYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 57/155 (36%), Gaps = 10/155 (6%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
L HPN+V + ++ +Y G LF R A + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELF-----ERICNAGRFSEDEARFFFQQLIS 126
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLT----DYCXXXXXXXXXXXXPDTVAYKAP 559
G++Y H A + H +LK N LL RL Y T AY AP
Sbjct: 127 GVSYCH-AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 185
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
E+ +DV++ GV L +L G +P + P
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP 220
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 57/155 (36%), Gaps = 10/155 (6%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
L HPN+V + ++ +Y G LF R A + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELF-----ERICNAGRFSEDEARFFFQQLIS 126
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLT----DYCXXXXXXXXXXXXPDTVAYKAP 559
G++Y H A + H +LK N LL RL Y T AY AP
Sbjct: 127 GVSYCH-AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAP 185
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
E+ +DV++ GV L +L G +P + P
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP 220
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 381 SEVYSLEQLMRASAELLGRGSIGTTYKAVLD-----NHLIVTVKRFDANKTA---DTSAE 432
EVY +L+ + LG G+ GT K + V + + +AN A + AE
Sbjct: 19 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 78
Query: 433 AFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT 492
A + L +P +V + +A+ LV+ + G L + +R ++ K +
Sbjct: 79 A-----NVMQQLDNPYIVRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNI--- 129
Query: 493 SCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD 552
+++ V+ G+ Y+ ++ +H +L + NVLL A+++D+
Sbjct: 130 --IELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 553 T------VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY 595
V + APE + + +SKSDV++FGVL+ E + Q PY
Sbjct: 187 QTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFS---YGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 381 SEVYSLEQLMRASAELLGRGSIGTTYKAVLD-----NHLIVTVKRFDANKTA---DTSAE 432
EVY +L+ + LG G+ GT K + V + + +AN A + AE
Sbjct: 19 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 78
Query: 433 AFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT 492
A + L +P +V + +A+ LV+ + G L + +R ++ K +
Sbjct: 79 A-----NVMQQLDNPYIVRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNI--- 129
Query: 493 SCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD 552
+++ V+ G+ Y+ ++ +H +L + NVLL A+++D+
Sbjct: 130 --IELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 553 T------VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY 595
V + APE + + +SKSDV++FGVL+ E + Q PY
Sbjct: 187 QTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFS---YGQKPY 231
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 57/155 (36%), Gaps = 10/155 (6%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
L HPN+V + ++ +Y G LF R A + +
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELF-----ERICNAGRFSEDEARFFFQQLIS 125
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLT----DYCXXXXXXXXXXXXPDTVAYKAP 559
G++Y H A + H +LK N LL RL Y T AY AP
Sbjct: 126 GVSYCH-AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 184
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
E+ +DV++ GV L +L G +P + P
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP 219
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 84/216 (38%), Gaps = 24/216 (11%)
Query: 385 SLEQLMRASAELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTS-------AEAFEQH 437
++++ MR LG+G Y+ + D + K A K S E
Sbjct: 40 TMKRYMRG--RFLGKGGFAKCYE-ITD----MDTKEVFAGKVVPKSMLLKPHQKEKMSTE 92
Query: 438 MEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI 497
+ L +P++V +F+ V+ + SL L H R +P
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP----EARYF 147
Query: 498 AEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TV 554
QG+ Y+H + +IH +LK N+ L D + ++ D+ D T
Sbjct: 148 MRQTIQGVQYLHN-NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP 206
Query: 555 AYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
Y APE+ + + + D+++ G +L LL GK P
Sbjct: 207 NYIAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 12 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINAMLNHENVV 68
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 123
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 124 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVV 67
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 122
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 123 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDW 220
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HP L ++ FQ + +Y G LF H SR + ++ L
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRE---RVFSEDRARFYGAEIVSAL 121
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXX-XXXXXXXXXXPDTVAYKAPEIR 562
Y+H +++ +LK N++L D ++TD+ C T Y APE+
Sbjct: 122 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 181
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGKHP---SQHPYLAPPDMLEWVRTMR 609
+ + + D + GV++ E++ G+ P H L ++E +R R
Sbjct: 182 EDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 230
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 501 VAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXX---PDTVA-- 555
+ +GL YIH A+ ++H +LK SN+L+ + ++ D+ + VA
Sbjct: 153 ILRGLKYIHSAN-VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 556 -YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK--HPSQH 593
Y+APEI +S+ T D+++ G +L E+L+ + P +H
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 12/167 (7%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HP L ++ FQ + +Y G LF H SR + ++ L
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRE---RVFSEDRARFYGAEIVSAL 264
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXX-XXXXXXXXXXPDTVAYKAPEIR 562
Y+H +++ +LK N++L D ++TD+ C T Y APE+
Sbjct: 265 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 324
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGKHP---SQHPYLAPPDMLEWVR 606
+ + + D + GV++ E++ G+ P H L ++E +R
Sbjct: 325 EDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 370
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 381 SEVYSLEQLMRASAELLGRGSIGTTYKAVLD-----NHLIVTVKRFDANKTA---DTSAE 432
EVY +L+ + LG G+ GT K + V + + +AN A + AE
Sbjct: 9 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 68
Query: 433 AFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT 492
A + L +P +V + +A+ LV+ + G L + +R ++ K +
Sbjct: 69 A-----NVMQQLDNPYIVRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNI--- 119
Query: 493 SCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD 552
+++ V+ G+ Y+ ++ +H +L + NVLL A+++D+
Sbjct: 120 --IELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 176
Query: 553 T------VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY 595
V + APE + + +SKSDV++FGVL+ E + Q PY
Sbjct: 177 QTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFS---YGQKPY 221
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 12/167 (7%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HP L ++ FQ + +Y G LF H SR + ++ L
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRE---RVFSEDRARFYGAEIVSAL 261
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXX-XXXXXXXXXXPDTVAYKAPEIR 562
Y+H +++ +LK N++L D ++TD+ C T Y APE+
Sbjct: 262 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 321
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGKHP---SQHPYLAPPDMLEWVR 606
+ + + D + GV++ E++ G+ P H L ++E +R
Sbjct: 322 EDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 367
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 381 SEVYSLEQLMRASAELLGRGSIGTTYKAVLD-----NHLIVTVKRFDANKTA---DTSAE 432
EVY +L+ + LG G+ GT K + V + + +AN A + AE
Sbjct: 17 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 76
Query: 433 AFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT 492
A + L +P +V + +A+ LV+ + G L + +R ++ K +
Sbjct: 77 A-----NVMQQLDNPYIVRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNI--- 127
Query: 493 SCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD 552
+++ V+ G+ Y+ ++ +H +L + NVLL A+++D+
Sbjct: 128 --IELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 184
Query: 553 T------VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY 595
V + APE + + +SKSDV++FGVL+ E + Q PY
Sbjct: 185 QTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFS---YGQKPY 229
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 26/224 (11%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E LG G+ G ++ V V V +F N + + + L HP L+ +
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKF-INTPYPLDKYTVKNEISIMNQLHHPKLINLHD 115
Query: 455 YFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514
F+ K E ++I ++ G LF+ I ++ + +GL ++H S +
Sbjct: 116 AFEDKYEMVLILEFLSGGELFDRIAAEDYKMSE----AEVINYMRQACEGLKHMHEHS-I 170
Query: 515 IHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD--------TVAYKAPEIRKSSR 566
+H ++K N++ E + PD T + APEI R
Sbjct: 171 VHLDIKPENIMC----ETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEI--VDR 224
Query: 567 RATS-KSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMR 609
+D++A GVL LL+G P A D LE ++ ++
Sbjct: 225 EPVGFYTDMWAIGVLGYVLLSGLSP-----FAGEDDLETLQNVK 263
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HP L ++ FQ + +Y G LF H SR + ++ L
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRE---RVFSEDRARFYGAEIVSAL 122
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXX-XXXXXXXXXXPDTVAYKAPEIR 562
Y+H +++ +LK N++L D ++TD+ C T Y APE+
Sbjct: 123 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 182
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGKHP---SQHPYLAPPDMLEWVRTMR 609
+ + + D + GV++ E++ G+ P H L ++E +R R
Sbjct: 183 EDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 231
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVV 67
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 122
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 123 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVV 67
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 122
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 123 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HP L ++ FQ + +Y G LF H SR + ++ L
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRE---RVFSEDRARFYGAEIVSAL 123
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXX-XXXXXXXXXXPDTVAYKAPEIR 562
Y+H +++ +LK N++L D ++TD+ C T Y APE+
Sbjct: 124 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 183
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGKHP---SQHPYLAPPDMLEWVRTMR 609
+ + + D + GV++ E++ G+ P H L ++E +R R
Sbjct: 184 EDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 232
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 12 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVV 68
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 123
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 124 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 12 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVV 68
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 123
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 124 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 12 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVV 68
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 123
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 124 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 12 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVV 68
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 123
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 124 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 15/202 (7%)
Query: 396 LLGRGSIGTTY----KAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
+LG+GS G K + + I +K+ + D E+ + A+ P L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD-KPPFLTQ 84
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ + FQ + +Y G L I + + A +++ GL ++H+
Sbjct: 85 LHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKE-----PQAVFYAAEISIGLFFLHKR 139
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSRRA 568
+I+ +LK NV+L ++ ++ D+ + T Y APEI
Sbjct: 140 G-IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYG 198
Query: 569 TSKSDVYAFGVLLLELLTGKHP 590
S D +A+GVLL E+L G+ P
Sbjct: 199 KS-VDWWAYGVLLYEMLAGQPP 219
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 12 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVV 68
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 123
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 124 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVV 67
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 122
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 123 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVV 67
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 122
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 123 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDC-PENIKKEICINKMLNHENVV 67
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 122
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 123 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVV 67
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 122
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 123 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 10 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVV 66
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 67 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 121
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 122 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 219
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 11 VQTLGEGAAGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVV 67
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 122
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 123 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVV 67
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 122
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 123 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 111/281 (39%), Gaps = 34/281 (12%)
Query: 397 LGRGSIGTTYKAV---LDNH-----LIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHP 447
LG G+ G A +D + V VK + T D S E M + G H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHK 101
Query: 448 NLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSR-----------SIRAKPLHWTSCLK 496
N++ + G VI +Y G+L + R + + + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 497 IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT--- 553
+A+G+ Y+ IH +L + NVL+ + R+ D+ T
Sbjct: 162 CTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGR 220
Query: 554 --VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MR 609
V + APE R T +SDV++FGVL+ E+ T G P +P + ++ + ++ R
Sbjct: 221 LPVKWMAPEAL-FDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLKEGHR 277
Query: 610 VDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650
+D + N L + C P QRP Q+++ + I
Sbjct: 278 MD--KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 12 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVV 68
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 123
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 124 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 120/304 (39%), Gaps = 60/304 (19%)
Query: 375 VFCAGESEVYSLEQLMRASAELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAF 434
V C EV E+L + +G+G+ G +KA H K + E F
Sbjct: 9 VECPFCDEVSKYEKLAK-----IGQGTFGEVFKA---RHRKTGQKVALKKVLMENEKEGF 60
Query: 435 E----QHMEAVGGLSHPNLVPI--------RAYFQAKGERLVIYDYQPNGSLFNLIHGSR 482
+ ++ + L H N+V + Y + KG +++D+ + + G
Sbjct: 61 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD-----LAGLL 115
Query: 483 SIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXX 542
S + ++ + + GL YIHR ++H ++K++NVL+ D +L D+
Sbjct: 116 SNVLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARA 174
Query: 543 XXXXXXXXPD-------TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY 595
P+ T+ Y+ PE+ R D++ G ++ E+
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM----------- 223
Query: 596 LAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSLKSPEQRP-----AMWQVLKMIQEI 650
W R+ + E+++L ++++ +C +PE P +++ L++++
Sbjct: 224 --------WTRSPIMQGNTEQHQLALISQ---LCGSITPEVWPNVDNYELYEKLELVKGQ 272
Query: 651 KESV 654
K V
Sbjct: 273 KRKV 276
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 57/155 (36%), Gaps = 10/155 (6%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
L HPN+V + ++ +Y G LF R A + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELF-----ERICNAGRFSEDEARFFFQQLIS 126
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLT----DYCXXXXXXXXXXXXPDTVAYKAP 559
G++Y H A + H +LK N LL RL Y T AY AP
Sbjct: 127 GVSYAH-AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAP 185
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
E+ +DV++ GV L +L G +P + P
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP 220
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 33/212 (15%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSA---EAFEQHMEA-----VGGLSH 446
+++G+GS G K +L H V F A K A + E+H+ + + + H
Sbjct: 44 KVIGKGSFG---KVLLARHKAEEV--FYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 447 PNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSI---RAKPLHWTSCLKIAEDVAQ 503
P LV + FQ + + DY G LF + R RA+ A ++A
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRAR--------FYAAEIAS 150
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXXXXXXXXXXXX-PDTVAYKAPE 560
L Y+H + +++ +LK N+LL + LTD+ C T Y APE
Sbjct: 151 ALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPE 209
Query: 561 I--RKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+ ++ R D + G +L E+L G P
Sbjct: 210 VLHKQPYDRTV---DWWCLGAVLYEMLYGLPP 238
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 10/200 (5%)
Query: 397 LGRGSIGTTYKA-VLDNHLIVTVKRFDANKTADTSAEA-FEQHMEAVGGLSHPNLVPIRA 454
+GRG Y+A L + + V +K+ D A A + ++ + L+HPN++ A
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 455 YFQAKGERLVIYDYQPNGSLFNLI-HGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW 513
F E ++ + G L +I H + R P + K + L ++H +
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIP--ERTVWKYFVQLCSALEHMH-SRR 156
Query: 514 LIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRKSSRRATS 570
++H ++K +NV + A +L D V Y +PE R
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE-RIHENGYNF 215
Query: 571 KSDVYAFGVLLLELLTGKHP 590
KSD+++ G LL E+ + P
Sbjct: 216 KSDIWSLGCLLYEMAALQSP 235
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 394 AELLGRGSIGTTYKAVLDNHLI---VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ LG G+ G AV N + V VK D + D E ++ + L+H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVV 67
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + + + +Y G LF+ I + +P + + G+ Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 122
Query: 511 ASWLIHGNLKSSNVLLGADFEARLTDYCXXXX-----XXXXXXXXPDTVAYKAPEIRKSS 565
+ H ++K N+LL +++D+ T+ Y APE+ K
Sbjct: 123 IG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 566 RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEW 604
DV++ G++L +L G+ P P + + +W
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 382 EVYSLEQLMRASAELLGRGSIGTTYKAVLD-----NHLIVTVKRFDANKTA---DTSAEA 433
EVY +L+ + LG G+ GT K + V + + +AN A + AEA
Sbjct: 362 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 421
Query: 434 FEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTS 493
+ L +P +V + +A+ LV+ + G L + +R ++ K +
Sbjct: 422 -----NVMQQLDNPYIVRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDK-----N 470
Query: 494 CLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT 553
+++ V+ G+ Y+ ++ +H +L + NVLL A+++D+
Sbjct: 471 IIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529
Query: 554 ------VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY 595
V + APE + + +SKSDV++FGVL+ E + Q PY
Sbjct: 530 THGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFS---YGQKPY 573
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 86/222 (38%), Gaps = 39/222 (17%)
Query: 395 ELLGRGSIGTTYKA---VLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
+ LGRG G ++A V D + + R + A E + ++A+ L HP +V
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELA---REKVMREVKALAKLEHPGIV- 66
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLH-WTS------------CLKIA 498
YF A E+ QP+ L + R + L W + CL I
Sbjct: 67 --RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP------- 551
+A+ + ++H + L+H +LK SN+ D ++ D+
Sbjct: 125 LQIAEAVEFLH-SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 552 --------DTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELL 585
T Y +PE + + K D+++ G++L ELL
Sbjct: 184 YARHTGQVGTKLYMSPE-QIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 85/213 (39%), Gaps = 38/213 (17%)
Query: 397 LGRGSIGTTYKAVLDNH-----LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG GS K V + + KR +AN + +A ++ G HPN+V
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITA------LKLCEG--HPNIVK 70
Query: 452 IRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ F + ++ + G LF R + K T I + ++++H
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELF-----ERIKKKKHFSETEASYIMRKLVSAVSHMHDV 125
Query: 512 SWLIHGNLKSSNVLL---GADFEARLTDYCXXXXXXXXXXXXPD---------TVAYKAP 559
++H +LK N+L + E ++ D+ PD T+ Y AP
Sbjct: 126 G-VVHRDLKPENLLFTDENDNLEIKIIDF------GFARLKPPDNQPLKTPCFTLHYAAP 178
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQ 592
E+ + S D+++ GV+L +L+G+ P Q
Sbjct: 179 ELLNQNGYDES-CDLWSLGVILYTMLSGQVPFQ 210
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 382 EVYSLEQLMRASAELLGRGSIGTTYKAVLD-----NHLIVTVKRFDANKTA---DTSAEA 433
EVY +L+ + LG G+ GT K + V + + +AN A + AEA
Sbjct: 363 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA 422
Query: 434 FEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTS 493
+ L +P +V + +A+ LV+ + G L + +R ++ K +
Sbjct: 423 -----NVMQQLDNPYIVRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDK-----N 471
Query: 494 CLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT 553
+++ V+ G+ Y+ ++ +H +L + NVLL A+++D+
Sbjct: 472 IIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 530
Query: 554 ------VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY 595
V + APE + + +SKSDV++FGVL+ E + Q PY
Sbjct: 531 THGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFS---YGQKPY 574
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 120/304 (39%), Gaps = 60/304 (19%)
Query: 375 VFCAGESEVYSLEQLMRASAELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAF 434
V C EV E+L + +G+G+ G +KA H K + E F
Sbjct: 9 VECPFCDEVSKYEKLAK-----IGQGTFGEVFKA---RHRKTGQKVALKKVLMENEKEGF 60
Query: 435 E----QHMEAVGGLSHPNLVPI--------RAYFQAKGERLVIYDYQPNGSLFNLIHGSR 482
+ ++ + L H N+V + Y + KG +++D+ + + G
Sbjct: 61 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD-----LAGLL 115
Query: 483 SIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXX 542
S + ++ + + GL YIHR ++H ++K++NVL+ D +L D+
Sbjct: 116 SNVLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARA 174
Query: 543 XXXXXXXXPD-------TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY 595
P+ T+ Y+ PE+ R D++ G ++ E+
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM----------- 223
Query: 596 LAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSLKSPEQRP-----AMWQVLKMIQEI 650
W R+ + E+++L ++++ +C +PE P +++ L++++
Sbjct: 224 --------WTRSPIMQGNTEQHQLALISQ---LCGSITPEVWPNVDNYELYEKLELVKGQ 272
Query: 651 KESV 654
K V
Sbjct: 273 KRKV 276
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 10/155 (6%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
L HPN+V + +I +Y G L+ I + + + +
Sbjct: 73 LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARF-----FFQQLLS 127
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLT----DYCXXXXXXXXXXXXPDTVAYKAP 559
G++Y H + + H +LK N LL RL Y T AY AP
Sbjct: 128 GVSYCH-SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 186
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594
E+ +DV++ GV L +L G +P + P
Sbjct: 187 EVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDP 221
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 21/203 (10%)
Query: 397 LGRGSIGTT----YKAVLDN-HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + F++ ++ + L +V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 452 IR--AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH 509
R +Y + E ++ +Y P+G L + + R+ L + L + + +G+ Y+
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLG 128
Query: 510 RASWLIHGNLKSSNVLLGADFEARLTDYCXXX------XXXXXXXXXPDTVAYKAPEIRK 563
+ +H +L + N+L+ ++ ++ D+ + + APE
Sbjct: 129 -SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPE-SL 186
Query: 564 SSRRATSKSDVYAFGVLLLELLT 586
S + +SDV++FGV+L EL T
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 113/281 (40%), Gaps = 34/281 (12%)
Query: 397 LGRGSIGTTYKAV---LDNH-----LIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHP 447
LG G+ G A +D + V VK + T D S E M + G H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHK 101
Query: 448 NLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSR-----------SIRAKPLHWTSCLK 496
N++ + G VI +Y G+L + R + + + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVS 161
Query: 497 IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT--- 553
+A+G+ Y+ IH +L + NVL+ + ++ D+ T
Sbjct: 162 CTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 554 --VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MR 609
V + APE R T +SDV++FGVL+ E+ T G P +P + ++ + ++ R
Sbjct: 221 LPVKWMAPEAL-FDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLKEGHR 277
Query: 610 VDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650
+D + N L + C P QRP Q+++ + I
Sbjct: 278 MD--KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 26/256 (10%)
Query: 414 LIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472
+ V VK + T D S E M + G H N++ + G VI +Y G
Sbjct: 55 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKG 113
Query: 473 SLFNLIHGSR-----------SIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKS 521
+L + R + + + + + +A+G+ Y+ IH +L +
Sbjct: 114 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLTA 172
Query: 522 SNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKAPEIRKSSRRATSKSDVYA 576
NVL+ + ++ D+ T V + APE R T +SDV++
Sbjct: 173 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWS 231
Query: 577 FGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSP 634
FGVL+ E+ T G P +P + ++ + ++ R+D + N L + C P
Sbjct: 232 FGVLMWEIFTLGGSP--YPGIPVEELFKLLKEGHRMD--KPANCTNELYMMMRDCWHAVP 287
Query: 635 EQRPAMWQVLKMIQEI 650
QRP Q+++ + I
Sbjct: 288 SQRPTFKQLVEDLDRI 303
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 113/281 (40%), Gaps = 34/281 (12%)
Query: 397 LGRGSIGTTYKAV---LDNH-----LIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHP 447
LG G+ G A +D + V VK + T D S E M + G H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHK 101
Query: 448 NLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSR-----------SIRAKPLHWTSCLK 496
N++ + G VI +Y G+L + R + + + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 497 IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT--- 553
+A+G+ Y+ IH +L + NVL+ + ++ D+ T
Sbjct: 162 CTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 554 --VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MR 609
V + APE R T +SDV++FGVL+ E+ T G P +P + ++ + ++ R
Sbjct: 221 LPVKWMAPEAL-FDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLKEGHR 277
Query: 610 VDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650
+D + N L + C P QRP Q+++ + I
Sbjct: 278 MD--KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 441 VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT--SCLKIA 498
+G HPN+V + +++ ++ NG+L +R +T + +
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL------DAFLRKHDGQFTVIQLVGML 151
Query: 499 EDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYKA 558
+A G+ Y+ + +H +L + N+L+ ++ +++D+ T K
Sbjct: 152 RGIAAGMRYLADMGY-VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI 210
Query: 559 PEIRKSS------RRATSKSDVYAFGVLLLELLT-GKHP 590
P +R ++ R+ TS SDV+++G+++ E+++ G+ P
Sbjct: 211 P-VRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 26/256 (10%)
Query: 414 LIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472
+ V VK + T D S E M + G H N++ + G VI +Y G
Sbjct: 57 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKG 115
Query: 473 SLFNLIHGSR-----------SIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKS 521
+L + R + + + + + +A+G+ Y+ IH +L +
Sbjct: 116 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAA 174
Query: 522 SNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKAPEIRKSSRRATSKSDVYA 576
NVL+ + ++ D+ T V + APE R T +SDV++
Sbjct: 175 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWS 233
Query: 577 FGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSP 634
FGVL+ E+ T G P +P + ++ + ++ R+D + N L + C P
Sbjct: 234 FGVLMWEIFTLGGSP--YPGIPVEELFKLLKEGHRMD--KPANCTNELYMMMRDCWHAVP 289
Query: 635 EQRPAMWQVLKMIQEI 650
QRP Q+++ + I
Sbjct: 290 SQRPTFKQLVEDLDRI 305
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 120/304 (39%), Gaps = 60/304 (19%)
Query: 375 VFCAGESEVYSLEQLMRASAELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAF 434
V C EV E+L + +G+G+ G +KA H K + E F
Sbjct: 8 VECPFCDEVSKYEKLAK-----IGQGTFGEVFKA---RHRKTGQKVALKKVLMENEKEGF 59
Query: 435 E----QHMEAVGGLSHPNLVPI--------RAYFQAKGERLVIYDYQPNGSLFNLIHGSR 482
+ ++ + L H N+V + Y + KG +++D+ + + G
Sbjct: 60 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD-----LAGLL 114
Query: 483 SIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXX 542
S + ++ + + GL YIHR ++H ++K++NVL+ D +L D+
Sbjct: 115 SNVLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARA 173
Query: 543 XXXXXXXXPD-------TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY 595
P+ T+ Y+ PE+ R D++ G ++ E+
Sbjct: 174 FSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM----------- 222
Query: 596 LAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSLKSPEQRP-----AMWQVLKMIQEI 650
W R+ + E+++L ++++ +C +PE P +++ L++++
Sbjct: 223 --------WTRSPIMQGNTEQHQLALISQ---LCGSITPEVWPNVDNYELYEKLELVKGQ 271
Query: 651 KESV 654
K V
Sbjct: 272 KRKV 275
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 111/281 (39%), Gaps = 34/281 (12%)
Query: 397 LGRGSIGTTYKAV---LDNH-----LIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHP 447
LG G+ G A +D + V VK + T D S E M + G H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHK 101
Query: 448 NLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSR-----------SIRAKPLHWTSCLK 496
N++ + G VI +Y G+L + R + + + + +
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 497 IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT--- 553
+A+G+ Y+ IH +L + NVL+ + ++ D+ T
Sbjct: 162 CTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 554 --VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MR 609
V + APE R T +SDV++FGVL+ E+ T G P +P + ++ + ++ R
Sbjct: 221 LPVKWMAPEAL-FDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLKEGHR 277
Query: 610 VDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650
+D + N L + C P QRP Q+++ + I
Sbjct: 278 MD--KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 26/256 (10%)
Query: 414 LIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472
+ V VK + T D S E M + G H N++ + G VI +Y G
Sbjct: 114 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKG 172
Query: 473 SLFNLIHGSR-----------SIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKS 521
+L + R + + + + + +A+G+ Y+ IH +L +
Sbjct: 173 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAA 231
Query: 522 SNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKAPEIRKSSRRATSKSDVYA 576
NVL+ + ++ D+ T V + APE R T +SDV++
Sbjct: 232 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWS 290
Query: 577 FGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSP 634
FGVL+ E+ T G P +P + ++ + ++ R+D + N L + C P
Sbjct: 291 FGVLMWEIFTLGGSP--YPGIPVEELFKLLKEGHRMD--KPANCTNELYMMMRDCWHAVP 346
Query: 635 EQRPAMWQVLKMIQEI 650
QRP Q+++ + I
Sbjct: 347 SQRPTFKQLVEDLDRI 362
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 26/256 (10%)
Query: 414 LIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472
+ V VK + T D S E M + G H N++ + G VI +Y G
Sbjct: 60 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKG 118
Query: 473 SLFNLIHGSR-----------SIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKS 521
+L + R + + + + + +A+G+ Y+ IH +L +
Sbjct: 119 NLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAA 177
Query: 522 SNVLLGADFEARLTDYCXXXXXXXXXXXXPDT-----VAYKAPEIRKSSRRATSKSDVYA 576
NVL+ + ++ D+ T V + APE R T +SDV++
Sbjct: 178 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL-FDRVYTHQSDVWS 236
Query: 577 FGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MRVDDGREENRLGMLTEVASVCSLKSP 634
FGVL+ E+ T G P +P + ++ + ++ R+D + N L + C P
Sbjct: 237 FGVLMWEIFTLGGSP--YPGIPVEELFKLLKEGHRMD--KPANCTNELYMMMRDCWHAVP 292
Query: 635 EQRPAMWQVLKMIQEI 650
QRP Q+++ + I
Sbjct: 293 SQRPTFKQLVEDLDRI 308
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 30/227 (13%)
Query: 383 VYSLEQLMRASAELLGRGSIGTTYKAVLD-----NHLIVTVKRFDANKTA---DTSAEAF 434
VY +L+ + LG G+ GT K + V + + +AN A + AEA
Sbjct: 1 VYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEA- 59
Query: 435 EQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSC 494
+ L +P +V + +A+ LV+ + G L + +R ++ K +
Sbjct: 60 ----NVMQQLDNPYIVRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNI----- 109
Query: 495 LKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT- 553
+++ V+ G+ Y+ ++ +H +L + NVLL A+++D+
Sbjct: 110 IELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168
Query: 554 -----VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY 595
V + APE + + +SKSDV++FGVL+ E + Q PY
Sbjct: 169 HGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFS---YGQKPY 211
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 111/281 (39%), Gaps = 34/281 (12%)
Query: 397 LGRGSIGTTYKAV---LDNH-----LIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHP 447
LG G+ G A +D + V VK + T D S E M + G H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIG-KHK 101
Query: 448 NLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSR-----------SIRAKPLHWTSCLK 496
N++ + G VI +Y G+L + R + + + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 497 IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT--- 553
+A+G+ Y+ IH +L + NVL+ + ++ D+ T
Sbjct: 162 CTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 554 --VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MR 609
V + APE R T +SDV++FGVL+ E+ T G P +P + ++ + ++ R
Sbjct: 221 LPVKWMAPEAL-FDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLKEGHR 277
Query: 610 VDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650
+D + N L + C P QRP Q+++ + I
Sbjct: 278 MD--KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 397 LGRGSIGTTYKAVL---DNHLIVTVKRF-DANKTADTSAEAFEQHMEAVGGLSHPNLVPI 452
LG G+ G+ + V + V +K + ADT E + + + L +P +V +
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT--EEMMREAQIMHQLDNPYIVRL 401
Query: 453 RAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
QA+ LV+ + G L + G R + + ++ ++ V+ G+ Y+ +
Sbjct: 402 IGVCQAEALMLVM-EMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEKN 456
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYK------APEIRKSSR 566
+H NL + NVLL A+++D+ A K APE + R
Sbjct: 457 -FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC-INFR 514
Query: 567 RATSKSDVYAFGVLLLELLTGKHPSQHPY 595
+ +S+SDV+++GV + E L+ Q PY
Sbjct: 515 KFSSRSDVWSYGVTMWEALSY---GQKPY 540
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 111/281 (39%), Gaps = 34/281 (12%)
Query: 397 LGRGSIGTTYKAV---LDNH-----LIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHP 447
LG G+ G A +D + V VK + T D S E M + G H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHK 101
Query: 448 NLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSR-----------SIRAKPLHWTSCLK 496
N++ + G VI +Y G+L + R + + + + +
Sbjct: 102 NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 497 IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT--- 553
+A+G+ Y+ IH +L + NVL+ + ++ D+ T
Sbjct: 162 CTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 554 --VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MR 609
V + APE R T +SDV++FGVL+ E+ T G P +P + ++ + ++ R
Sbjct: 221 LPVKWMAPEAL-FDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLKEGHR 277
Query: 610 VDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650
+D + N L + C P QRP Q+++ + I
Sbjct: 278 MD--KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 111/281 (39%), Gaps = 34/281 (12%)
Query: 397 LGRGSIGTTYKAV---LDNH-----LIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHP 447
LG G+ G A +D + V VK + T D S E M + G H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHK 101
Query: 448 NLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSR-----------SIRAKPLHWTSCLK 496
N++ + G VI +Y G+L + R + + + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 497 IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT--- 553
+A+G+ Y+ IH +L + NVL+ + ++ D+ T
Sbjct: 162 CTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGR 220
Query: 554 --VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MR 609
V + APE R T +SDV++FGVL+ E+ T G P +P + ++ + ++ R
Sbjct: 221 LPVKWMAPEAL-FDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLKEGHR 277
Query: 610 VDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650
+D + N L + C P QRP Q+++ + I
Sbjct: 278 MD--KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 73
Query: 447 PNLVPIRAYFQAKGERLVIYD-YQPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 74 -GVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQ--------VL 124
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 125 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 183
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 216
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 74
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 75 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 125
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 126 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 184
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 17/158 (10%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQ 503
L +P +V + +A+ LV+ + G L + +R ++ K + +++ V+
Sbjct: 63 LDNPYIVRMIGICEAESWMLVM-EMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSM 116
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT------VAYK 557
G+ Y+ ++ +H +L + NVLL A+++D+ V +
Sbjct: 117 GMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 175
Query: 558 APEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY 595
APE + + +SKSDV++FGVL+ E + Q PY
Sbjct: 176 APEC-INYYKFSSKSDVWSFGVLMWEAFS---YGQKPY 209
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/284 (18%), Positives = 111/284 (39%), Gaps = 59/284 (20%)
Query: 396 LLGRGSIGTTYKA--VLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
+LG+G+ G KA LD+ R+ A K + E + V L+ N +
Sbjct: 13 VLGQGAFGQVVKARNALDS-------RYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 454 AYFQAKGER----------------LVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI 497
Y+ A ER + +Y N +L++LIH + + +W ++
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RL 121
Query: 498 AEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP------ 551
+ + L+YIH + +IH +LK N+ + ++ D+
Sbjct: 122 FRQILEALSYIH-SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 552 -----------DTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY---LA 597
T Y A E+ + K D+Y+ G++ E++ +P+ +
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI-------YPFSTGME 233
Query: 598 PPDMLEWVRTMRVD--DGREENRLGMLTEVASVCSLKSPEQRPA 639
++L+ +R++ ++ ++N++ + ++ + P +RP
Sbjct: 234 RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 84/202 (41%), Gaps = 14/202 (6%)
Query: 395 ELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E +G G+ GT +KA + H IV +KR + + + + + + L H N+V +
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 454 AYFQAKGERLVIYDY--QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ + +++++ Q F+ +G LK GL + H
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLK-------GLGFCHSR 120
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDYCXXXXX---XXXXXXXPDTVAYKAPEIRKSSRRA 568
+ ++H +LK N+L+ + E +L D+ T+ Y+ P++ ++
Sbjct: 121 N-VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 569 TSKSDVYAFGVLLLELLTGKHP 590
++ D+++ G + EL P
Sbjct: 180 STSIDMWSAGCIFAELANAARP 201
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 74
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 75 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 125
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 126 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 184
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 69
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 70 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 120
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 121 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 179
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 96
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 97 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 147
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 148 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 206
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 207 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 239
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 73
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 74 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 124
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 125 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 183
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 216
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 69
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 70 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 120
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 121 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 179
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 74
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 75 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 125
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 126 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 184
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 88
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 89 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 139
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 140 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 198
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 231
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 72
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 73 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 123
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 124 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 182
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 215
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 102
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 103 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 153
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 154 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 212
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 101
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 102 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 152
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 153 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 211
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 88
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 89 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 139
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 140 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 198
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 231
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 101
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 102 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 152
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 153 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 211
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 89
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 90 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 140
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 141 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 199
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 102
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 103 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 153
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 154 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 212
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 89
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 90 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 140
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 141 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 199
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 116
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 117 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 167
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 168 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 226
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 101
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 102 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 152
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 153 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 211
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 89
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 90 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 140
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 141 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 199
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 102
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 103 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 153
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 154 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 212
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 101
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 102 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 152
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 153 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 211
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 102
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 103 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 153
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 154 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 212
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 116
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 117 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 167
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 168 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 226
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 108
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 109 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 159
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 160 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 218
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 219 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 110/281 (39%), Gaps = 34/281 (12%)
Query: 397 LGRGSIGTTYKAV---LDNH-----LIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHP 447
LG G+ G A +D + V VK + T D S E M + G H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHK 101
Query: 448 NLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSR-----------SIRAKPLHWTSCLK 496
N++ + G VI Y G+L + R + + + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 497 IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT--- 553
+A+G+ Y+ IH +L + NVL+ + ++ D+ T
Sbjct: 162 CTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 554 --VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MR 609
V + APE R T +SDV++FGVL+ E+ T G P +P + ++ + ++ R
Sbjct: 221 LPVKWMAPEAL-FDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLKEGHR 277
Query: 610 VDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650
+D + N L + C P QRP Q+++ + I
Sbjct: 278 MD--KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 84/218 (38%), Gaps = 24/218 (11%)
Query: 385 SLEQLMRASAELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTS-------AEAFEQH 437
++++ MR LG+G Y+ + D + K A K S E
Sbjct: 40 TMKRYMRG--RFLGKGGFAKCYE-ITD----MDTKEVFAGKVVPKSMLLKPHQKEKMSTE 92
Query: 438 MEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI 497
+ L +P++V +F+ V+ + SL L H R +P
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP----EARYF 147
Query: 498 AEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP---DTV 554
QG+ Y+H + +IH +LK N+ L D + ++ D+ T
Sbjct: 148 MRQTIQGVQYLHN-NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTP 206
Query: 555 AYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQ 592
Y APE+ + + + D+++ G +L LL GK P +
Sbjct: 207 NYIAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 83/216 (38%), Gaps = 24/216 (11%)
Query: 385 SLEQLMRASAELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTS-------AEAFEQH 437
++++ MR LG+G Y+ + D + K A K S E
Sbjct: 40 TMKRYMRG--RFLGKGGFAKCYE-ITD----MDTKEVFAGKVVPKSMLLKPHQKEKMSTE 92
Query: 438 MEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI 497
+ L +P++V +F+ V+ + SL L H R +P
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP----EARYF 147
Query: 498 AEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXX---XXXXXXPDTV 554
QG+ Y+H + +IH +LK N+ L D + ++ D+ T
Sbjct: 148 MRQTIQGVQYLHN-NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTP 206
Query: 555 AYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
Y APE+ + + + D+++ G +L LL GK P
Sbjct: 207 NYIAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 121
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 122 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 172
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 173 EAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 231
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 232 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 264
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 396 LLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSA--EAFEQHMEAV------GGLSH 446
LLG G G+ Y + + ++L V +K + ++ +D ME V G S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS- 69
Query: 447 PNLVPIRAYFQAKGERLVIYDY-QPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVA 502
++ + +F+ ++I + +P LF+ I +++ A+ W V
Sbjct: 70 -GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VL 120
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPE 560
+ + + H ++H ++K N+L+ + E +L D+ D T Y PE
Sbjct: 121 EAVRHCHNXG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 179
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593
+ R + V++ G+LL +++ G P +H
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 397 LGRGSIGTTYKAVL---DNHLIVTVKRF-DANKTADTSAEAFEQHMEAVGGLSHPNLVPI 452
LG G+ G+ + V + V +K + ADT E + + + L +P +V +
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT--EEMMREAQIMHQLDNPYIVRL 75
Query: 453 RAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
QA+ LV+ + G L + G R + + ++ ++ V+ G+ Y+ +
Sbjct: 76 IGVCQAEALMLVM-EMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 513 WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVAYK------APEIRKSSR 566
+H +L + NVLL A+++D+ A K APE + R
Sbjct: 131 -FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC-INFR 188
Query: 567 RATSKSDVYAFGVLLLELLTGKHPSQHPY 595
+ +S+SDV+++GV + E L+ Q PY
Sbjct: 189 KFSSRSDVWSYGVTMWEALS---YGQKPY 214
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 496 KIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA 555
KIA + + L ++H +IH ++K SNVL+ A + ++ D+ D
Sbjct: 157 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGC 216
Query: 556 --YKAPEI---RKSSRRATSKSDVYAFGVLLLELLTGKHP 590
Y APE + + + KSD+++ G+ ++EL + P
Sbjct: 217 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 256
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 110/281 (39%), Gaps = 34/281 (12%)
Query: 397 LGRGSIGTTYKAV---LDNH-----LIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHP 447
LG G+ G A +D + V VK + T D S E M + G H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHK 101
Query: 448 NLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSR-----------SIRAKPLHWTSCLK 496
N++ + G VI Y G+L + R + + + + +
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 497 IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT--- 553
+A+G+ Y+ IH +L + NVL+ + ++ D+ T
Sbjct: 162 CTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 554 --VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT-MR 609
V + APE R T +SDV++FGVL+ E+ T G P +P + ++ + ++ R
Sbjct: 221 LPVKWMAPEAL-FDRVYTHQSDVWSFGVLMWEIFTLGGSP--YPGIPVEELFKLLKEGHR 277
Query: 610 VDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650
+D + N L + C P QRP Q+++ + I
Sbjct: 278 MD--KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 68/167 (40%), Gaps = 13/167 (7%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HP L ++ FQ + +Y G LF + R + + ++ L
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-----EIVSAL 118
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXX-XXXXXXXXXXPDTVAYKAPEIR 562
Y+H +++ ++K N++L D ++TD+ C T Y APE+
Sbjct: 119 EYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 177
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGKHP---SQHPYLAPPDMLEWVR 606
+ + + D + GV++ E++ G+ P H L ++E +R
Sbjct: 178 EDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 85/213 (39%), Gaps = 33/213 (15%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E +G+G G ++ V VK F + D + E + L H N++ A
Sbjct: 43 ECVGKGRYGEVWRGSWQGE-NVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIA 98
Query: 455 Y----FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + +I Y GSL++ + + L SCL+I +A GLA++H
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAHLHI 152
Query: 511 ASW-------LIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP-------DTVAY 556
+ + H +LKS N+L+ + + + D T Y
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 212
Query: 557 KAPEIRKSSRR-----ATSKSDVYAFGVLLLEL 584
APE+ + + + + D++AFG++L E+
Sbjct: 213 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 82/225 (36%), Gaps = 47/225 (20%)
Query: 396 LLGRGSIGTTYKA--VLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
+LG+G+ G KA LD+ R+ A K + E + V L+ N +
Sbjct: 13 VLGQGAFGQVVKARNALDS-------RYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVV 65
Query: 454 AYFQAKGER----------------LVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKI 497
Y+ A ER + +Y N +L++LIH + + +W ++
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RL 121
Query: 498 AEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP------ 551
+ + L+YIH + +IH NLK N+ + ++ D+
Sbjct: 122 FRQILEALSYIH-SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 552 -----------DTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELL 585
T Y A E+ + K D Y+ G++ E +
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 74/171 (43%), Gaps = 35/171 (20%)
Query: 496 KIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD--- 552
++ + + GL YIHR ++H ++K++NVL+ D +L D+ P+
Sbjct: 129 RVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 553 ----TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTM 608
T+ Y+ PE+ R D++ G ++ E+ W R+
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-------------------WTRSP 228
Query: 609 RVDDGREENRLGMLTEVASVCSLKSPEQRP-----AMWQVLKMIQEIKESV 654
+ E+++L ++++ +C +PE P +++ L++++ K V
Sbjct: 229 IMQGNTEQHQLALISQ---LCGSITPEVWPNVDNYELYEKLELVKGQKRKV 276
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 13/167 (7%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HP L ++ FQ + +Y G LF + R + + ++ L
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-----EIVSAL 118
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXX-XXXXXXXXXXPDTVAYKAPEIR 562
Y+H +++ ++K N++L D ++TD+ C T Y APE+
Sbjct: 119 EYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 177
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGKHP---SQHPYLAPPDMLEWVR 606
+ + + D + GV++ E++ G+ P H L ++E +R
Sbjct: 178 EDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 68/167 (40%), Gaps = 13/167 (7%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HP L ++ FQ + +Y G LF + R + + ++ L
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-----EIVSAL 118
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXX-XXXXXXXXXXPDTVAYKAPEIR 562
Y+H +++ ++K N++L D ++TD+ C T Y APE+
Sbjct: 119 EYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 177
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGKHP---SQHPYLAPPDMLEWVR 606
+ + + D + GV++ E++ G+ P H L ++E +R
Sbjct: 178 EDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 13/167 (7%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HP L ++ FQ + +Y G LF + R + + ++ L
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-----EIVSAL 123
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXX-XXXXXXXXXXPDTVAYKAPEIR 562
Y+H +++ ++K N++L D ++TD+ C T Y APE+
Sbjct: 124 EYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 182
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGKHP---SQHPYLAPPDMLEWVR 606
+ + + D + GV++ E++ G+ P H L ++E +R
Sbjct: 183 EDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 228
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 68/167 (40%), Gaps = 13/167 (7%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HP L ++ FQ + +Y G LF + R + + ++ L
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-----EIVSAL 121
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXX-XXXXXXXXXXPDTVAYKAPEIR 562
Y+H +++ ++K N++L D ++TD+ C T Y APE+
Sbjct: 122 EYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 180
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGKHP---SQHPYLAPPDMLEWVR 606
+ + + D + GV++ E++ G+ P H L ++E +R
Sbjct: 181 EDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 226
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 85/213 (39%), Gaps = 33/213 (15%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E +G+G G ++ V VK F + D + E + L H N++ A
Sbjct: 14 ECVGKGRYGEVWRGSWQGE-NVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIA 69
Query: 455 Y----FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + +I Y GSL++ + + L SCL+I +A GLA++H
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 511 ASW-------LIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP-------DTVAY 556
+ + H +LKS N+L+ + + + D T Y
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 557 KAPEIRKSSRR-----ATSKSDVYAFGVLLLEL 584
APE+ + + + + D++AFG++L E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 13/167 (7%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HP L ++ FQ + +Y G LF + R + + ++ L
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-----EIVSAL 118
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXX-XXXXXXXXXXPDTVAYKAPEIR 562
Y+H +++ ++K N++L D ++TD+ C T Y APE+
Sbjct: 119 EYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 177
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGKHP---SQHPYLAPPDMLEWVR 606
+ + + D + GV++ E++ G+ P H L ++E +R
Sbjct: 178 EDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 397 LGRGSIGTT----YKAVLDN-HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + F++ ++ + L +V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 452 IRAYFQAKGE---RLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYI 508
R G RLV+ +Y P+G L + + R+ L + L + + +G+ Y+
Sbjct: 77 YRGVSYGPGRQSLRLVM-EYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYL 131
Query: 509 HRASWLIHGNLKSSNVLLGADFEARLTDYCXXX------XXXXXXXXXPDTVAYKAPEIR 562
+ +H +L + N+L+ ++ ++ D+ + + APE
Sbjct: 132 G-SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE-S 189
Query: 563 KSSRRATSKSDVYAFGVLLLELLT 586
S + +SDV++FGV+L EL T
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 85/213 (39%), Gaps = 33/213 (15%)
Query: 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
E +G+G G ++ V VK F + D + E + L H N++ A
Sbjct: 14 ECVGKGRYGEVWRGSWQGE-NVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIA 69
Query: 455 Y----FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ + +I Y GSL++ + + L SCL+I +A GLA++H
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 511 ASW-------LIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP-------DTVAY 556
+ + H +LKS N+L+ + + + D T Y
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 557 KAPEIRKSSRR-----ATSKSDVYAFGVLLLEL 584
APE+ + + + + D++AFG++L E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 496 KIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA 555
KIA + + L ++H +IH ++K SNVL+ A + ++ D+ D
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGC 172
Query: 556 --YKAPEI---RKSSRRATSKSDVYAFGVLLLELLTGKHP 590
Y APE + + + KSD+++ G+ ++EL + P
Sbjct: 173 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 212
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 13/167 (7%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HP L ++ FQ + +Y G LF + R + + ++ L
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-----EIVSAL 118
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXX-XXXXXXXXXXPDTVAYKAPEIR 562
Y+H +++ ++K N++L D ++TD+ C T Y APE+
Sbjct: 119 EYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 177
Query: 563 KSSRRATSKSDVYAFGVLLLELLTGKHP---SQHPYLAPPDMLEWVR 606
+ + + D + GV++ E++ G+ P H L ++E +R
Sbjct: 178 EDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 29/227 (12%)
Query: 375 VFCAGESEVYSL-EQLMRASAELLGRGS---IGTTYKAVLDNHLIVTVKRFDANKTADTS 430
+ C +E Y L E+L + + ++ R G Y A +I+ K+ A
Sbjct: 4 ITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAA-----MIINTKKLSAR-----D 53
Query: 431 AEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLF-NLIHGSRSIRAKPL 489
+ E+ L HPN+V + +G +I+D G LF +++ A
Sbjct: 54 HQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS 113
Query: 490 HWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEA---RLTDYCXXXXXXXX 546
H C+ + + + + + H+ ++H NLK N+LL + + +L D+
Sbjct: 114 H---CI---QQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166
Query: 547 XXX---XPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
T Y +PE+ + D++A GV+L LL G P
Sbjct: 167 QQAWFGFAGTPGYLSPEVLRKDPYG-KPVDLWACGVILYILLVGYPP 212
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 397 LGRGSIGTT----YKAVLDN-HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + F++ ++ + L +V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 452 IRAYFQAKGE---RLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYI 508
R G RLV+ +Y P+G L + + R+ L + L + + +G+ Y+
Sbjct: 76 YRGVSYGPGRQSLRLVM-EYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYL 130
Query: 509 HRASWLIHGNLKSSNVLLGADFEARLTDYCXXX------XXXXXXXXXPDTVAYKAPEIR 562
+ +H +L + N+L+ ++ ++ D+ + + APE
Sbjct: 131 G-SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE-S 188
Query: 563 KSSRRATSKSDVYAFGVLLLELLT 586
S + +SDV++FGV+L EL T
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 397 LGRGSIGTT----YKAVLDN-HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
LG+G+ G+ Y + DN +V VK+ + F++ ++ + L +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 452 IRAYFQAKGE---RLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYI 508
R G RLV+ +Y P+G L + + R+ L + L + + +G+ Y+
Sbjct: 89 YRGVSYGPGRQSLRLVM-EYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYL 143
Query: 509 HRASWLIHGNLKSSNVLLGADFEARLTDYCXXX------XXXXXXXXXPDTVAYKAPEIR 562
+ +H +L + N+L+ ++ ++ D+ + + APE
Sbjct: 144 G-SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE-S 201
Query: 563 KSSRRATSKSDVYAFGVLLLELLT 586
S + +SDV++FGV+L EL T
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 84/202 (41%), Gaps = 14/202 (6%)
Query: 395 ELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E +G G+ GT +KA + H IV +KR + + + + + + L H N+V +
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 454 AYFQAKGERLVIYDY--QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA 511
+ + +++++ Q F+ +G LK GL + H
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLK-------GLGFCHSR 120
Query: 512 SWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD---TVAYKAPEIRKSSRRA 568
+ ++H +LK N+L+ + E +L ++ T+ Y+ P++ ++
Sbjct: 121 N-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 569 TSKSDVYAFGVLLLELLTGKHP 590
++ D+++ G + EL P
Sbjct: 180 STSIDMWSAGCIFAELANAGRP 201
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 436 QHMEAVGGLSHPNLVPIRAYFQAKGERL-------VIYDYQPNGSLFNLI--HGSRSIRA 486
Q M+ + L HPN+V +++YF GER V+ +Y P+ +L + R +
Sbjct: 68 QIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAP 126
Query: 487 KPLHWTSCLKIAEDVAQGLAYIHRASW-LIHGNLKSSNVLLG-ADFEARLTDYCXXXXXX 544
P+ L + + + +H S + H ++K NVL+ AD +L D+
Sbjct: 127 PPILIKVFLF---QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS 183
Query: 545 XXXXXXPDTVA--YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
+ Y+APE+ ++ T+ D+++ G + E++ G+
Sbjct: 184 PSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/269 (17%), Positives = 104/269 (38%), Gaps = 28/269 (10%)
Query: 370 RSGSLVFCAGESEVYSLEQLMRASAELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADT 429
+ ++ C +++ Y+L++ ++ LL + T N+ +++K +
Sbjct: 43 KFNKIILCEKDNKFYALKKYEKS---LLEKKRDFTK-----SNNDKISIK---------S 85
Query: 430 SAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL-----FNLIHGSRSI 484
+ F+ ++ + + + + E +IY+Y N S+ + +
Sbjct: 86 KYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYT 145
Query: 485 RAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXX 544
P+ C I + V +YIH + H ++K SN+L+ + +L+D+
Sbjct: 146 CFIPIQVIKC--IIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMV 203
Query: 545 XXXXX-XPDTVAYKAPE-IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDML 602
T + PE S +K D+++ G+ L + P ++ ++
Sbjct: 204 DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK-ISLVELF 262
Query: 603 EWVRTMRVDDGREENR-LGMLTEVASVCS 630
+RT ++ + N L LT S CS
Sbjct: 263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCS 291
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 16/154 (10%)
Query: 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLI--HGSRSIRAKPLHWTSCLKIAEDV 501
LSHPN++ ++ F+ E ++ + G LF+ I G S R + +
Sbjct: 105 LSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSER-------DAADAVKQI 157
Query: 502 AQGLAYIHRASWLIHGNLKSSNVLLGA---DFEARLTDY--CXXXXXXXXXXXXPDTVAY 556
+ +AY+H ++H +LK N+L D ++ D+ T Y
Sbjct: 158 LEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGY 216
Query: 557 KAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
APEI + + D+++ G++ LL G P
Sbjct: 217 CAPEILRGCAYG-PEVDMWSVGIITYILLCGFEP 249
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 553 TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD 612
T ++APE+ T+ D+++ GV+ L LL+G++P Y A D+ + M +
Sbjct: 209 TPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF---YKASDDLTALAQIMTIRG 265
Query: 613 GREENRLGMLTEVASVCSLKSPEQ 636
RE + + +CS + P Q
Sbjct: 266 SRETIQAAKTFGKSILCSKEVPAQ 289
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 20/187 (10%)
Query: 416 VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAK---GERLVIY---DYQ 469
V +K+ T+A+ + ++ + H N++ I+ + GE +Y D
Sbjct: 83 VAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM 142
Query: 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD 529
L +IH S +PL + +GL Y+H A +IH +LK SN+L+ +
Sbjct: 143 -ESDLHQIIHSS-----QPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNEN 195
Query: 530 FEARLTDY------CXX-XXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLL 582
E ++ D+ C T Y+APE+ S T D+++ G +
Sbjct: 196 CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFG 255
Query: 583 ELLTGKH 589
E+L +
Sbjct: 256 EMLARRQ 262
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 496 KIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA 555
KI + L ++ +IH ++K SN+LL +L D+ D
Sbjct: 129 KITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGC 188
Query: 556 --YKAPE-IRKSSRRA--TSKSDVYAFGVLLLELLTGKHP 590
Y APE I S+ R +SDV++ G+ L EL TG+ P
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 83/211 (39%), Gaps = 23/211 (10%)
Query: 395 ELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG G G + + D V +K+ + + + E + ++ + L+HPN+V R
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNRERWCLEIQIMKKLNHPNVVSAR 79
Query: 454 AY------FQAKGERLVIYDYQPNGSL---FNLIHGSRSIRAKPLHWTSCLKIAEDVAQG 504
L+ +Y G L N ++ P+ + D++
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSA 134
Query: 505 LAYIHRASWLIHGNLKSSNVLLG---ADFEARLTD--YCXXXXXXXXXXXXPDTVAYKAP 559
L Y+H +IH +LK N++L ++ D Y T+ Y AP
Sbjct: 135 LRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
E+ + ++ T D ++FG L E +TG P
Sbjct: 194 ELLEQ-KKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 83/211 (39%), Gaps = 23/211 (10%)
Query: 395 ELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG G G + + D V +K+ + + + E + ++ + L+HPN+V R
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNRERWCLEIQIMKKLNHPNVVSAR 78
Query: 454 AY------FQAKGERLVIYDYQPNGSL---FNLIHGSRSIRAKPLHWTSCLKIAEDVAQG 504
L+ +Y G L N ++ P+ + D++
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSA 133
Query: 505 LAYIHRASWLIHGNLKSSNVLLG---ADFEARLTD--YCXXXXXXXXXXXXPDTVAYKAP 559
L Y+H +IH +LK N++L ++ D Y T+ Y AP
Sbjct: 134 LRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
E+ + ++ T D ++FG L E +TG P
Sbjct: 193 ELLEQ-KKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 20/186 (10%)
Query: 416 VTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAK---GERLVIY---DYQ 469
V +K+ T+A+ + ++ + H N++ I+ + GE +Y D
Sbjct: 82 VAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM 141
Query: 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD 529
L +IH S +PL + +GL Y+H A +IH +LK SN+L+ +
Sbjct: 142 -ESDLHQIIHSS-----QPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNEN 194
Query: 530 FEARLTDY------CXX-XXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLL 582
E ++ D+ C T Y+APE+ S T D+++ G +
Sbjct: 195 CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFG 254
Query: 583 ELLTGK 588
E+L +
Sbjct: 255 EMLARR 260
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + HPN++ + F+ K + ++I + G LF+ + S
Sbjct: 50 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES----- 104
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
L + + + G+ Y+H + + H +LK N++L
Sbjct: 105 LTEDEATQFLKQILDGVHYLH-SKRIAHFDLKPENIML 141
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 116/290 (40%), Gaps = 44/290 (15%)
Query: 397 LGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNL 449
LG G+ G +A D + V VK + T EA ++ + L +H N+
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHMNI 89
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRS--IRAKP-----------LHWTSCLK 496
V + G LVI +Y G L N + R I +K L L
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149
Query: 497 IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT--- 553
+ VA+G+A++ + IH +L + N+LL R+T C
Sbjct: 150 FSYQVAKGMAFLASKN-CIHRDLAARNILLT---HGRITKICDFGLARDIKNDSNYVVKG 205
Query: 554 -----VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTM 608
V + APE + T +SDV+++G+ L EL + PY P ++ + +
Sbjct: 206 NARLPVKWMAPE-SIFNCVYTFESDVWSYGIFLWELFS---LGSSPYPGMPVDSKFYKMI 261
Query: 609 RVDDGRE----ENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ-EIKES 653
+ +G E+ + ++ C P +RP Q++++I+ +I ES
Sbjct: 262 K--EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + HPN++ + F+ K + ++I + G LF+ + S+
Sbjct: 57 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE 116
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
T LK + G+ Y+H + + H +LK N++L
Sbjct: 117 A--TQFLK---QILDGVHYLH-SKRIAHFDLKPENIML 148
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + HPN++ + ++ K + ++I + G LF+ + S+ +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
T LK + G+ Y+H + H +LK N++L
Sbjct: 116 A--TEFLK---QILNGVYYLHSLQ-IAHFDLKPENIML 147
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + HPN++ + F+ K + ++I + G LF+ + S+
Sbjct: 71 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE 130
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
T LK + G+ Y+H + + H +LK N++L
Sbjct: 131 A--TQFLK---QILDGVHYLH-SKRIAHFDLKPENIML 162
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 112/269 (41%), Gaps = 32/269 (11%)
Query: 395 ELLGRGSIGTTYKAVLD--------NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSH 446
E LG+G+ +K V + V +K D K +E+F + + LSH
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLD--KAHRNYSESFFEAASMMSKLSH 71
Query: 447 PNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLA 506
+LV E +++ ++ GSL + +++ + W L++A+ +A +
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKN--CINILWK--LEVAKQLAAAMH 127
Query: 507 YIHRASWLIHGNLKSSNVLLGADFEARLTD--YCXXXXXXXXXXXXP-----DTVAYKAP 559
++ + LIHGN+ + N+LL + + + + + P + + + P
Sbjct: 128 FLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRL 619
E ++ + +D ++FG L E+ +G P L+ R ++ + R +
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICSGGD-------KPLSALDSQRKLQFYEDRHQLPA 239
Query: 620 GMLTEVASV---CSLKSPEQRPAMWQVLK 645
E+A++ C P+ RP+ +++
Sbjct: 240 PKAAELANLINNCMDYEPDHRPSFRAIIR 268
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + HPN++ + ++ K + ++I + G LF+ + S+ +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
T LK + G+ Y+H + H +LK N++L
Sbjct: 116 A--TEFLK---QILNGVYYLHSLQ-IAHFDLKPENIML 147
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + HPN++ + ++ K + ++I + G LF+ + S+ +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE- 114
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
T LK + G+ Y+H + H +LK N++L
Sbjct: 115 -EATEFLK---QILNGVYYLHSLQ-IAHFDLKPENIML 147
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 78/201 (38%), Gaps = 18/201 (8%)
Query: 397 LGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
+G GS G K + I+ K D + + + + L HPN+V Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV---RY 70
Query: 456 FQAKGER-----LVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ +R ++ +Y G L ++I R + L L++ + L HR
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQLTLALKECHR 129
Query: 511 AS----WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRK 563
S ++H +LK +NV L +L D+ + V Y +PE +
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPE-QM 188
Query: 564 SSRRATSKSDVYAFGVLLLEL 584
+ KSD+++ G LL EL
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + HPN++ + ++ K + ++I + G LF+ + S+ +
Sbjct: 55 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 114
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
T LK + G+ Y+H + H +LK N++L
Sbjct: 115 A--TEFLK---QILNGVYYLHSLQ-IAHFDLKPENIML 146
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + HPN++ + ++ K + ++I + G LF+ + S+ +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE- 114
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
T LK + G+ Y+H + H +LK N++L
Sbjct: 115 -EATEFLK---QILNGVYYLHSLQ-IAHFDLKPENIML 147
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + HPN++ + ++ K + ++I + G LF+ + S+ +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
T LK + G+ Y+H + H +LK N++L
Sbjct: 116 A--TEFLK---QILNGVYYLHSLQ-IAHFDLKPENIML 147
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + HPN++ + ++ K + ++I + G LF+ + S+ +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
T LK + G+ Y+H + H +LK N++L
Sbjct: 116 A--TEFLK---QILNGVYYLHSLQ-IAHFDLKPENIML 147
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + HPN++ + ++ K + ++I + G LF+ + S+ +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE- 114
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
T LK + G+ Y+H + H +LK N++L
Sbjct: 115 -EATEFLK---QILNGVYYLHSLQ-IAHFDLKPENIML 147
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 60/135 (44%), Gaps = 8/135 (5%)
Query: 392 ASAELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLV 450
+ E+LG G G +K L + K D E + + + L H NL+
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK--EEVKNEISVMNQLDHANLI 149
Query: 451 PIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ F++K + +++ +Y G LF+ I + L + + + +G+ ++H+
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRIID----ESYNLTELDTILFMKQICEGIRHMHQ 205
Query: 511 ASWLIHGNLKSSNVL 525
+++H +LK N+L
Sbjct: 206 M-YILHLDLKPENIL 219
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + HPN++ + ++ K + ++I + G LF+ + S+ +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
T LK + G+ Y+H + H +LK N++L
Sbjct: 116 A--TEFLK---QILNGVYYLHSLQ-IAHFDLKPENIML 147
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + HPN++ + ++ K + ++I + G LF+ + S+ +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE- 114
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
T LK + G+ Y+H + H +LK N++L
Sbjct: 115 -EATEFLK---QILNGVYYLHSLQ-IAHFDLKPENIML 147
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + HPN++ + ++ K + ++I + G LF+ + S+ +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
T LK + G+ Y+H + H +LK N++L
Sbjct: 116 A--TEFLK---QILNGVYYLHSLQ-IAHFDLKPENIML 147
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + HPN++ + ++ K + ++I + G LF+ + S+ +
Sbjct: 55 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 114
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
T LK + G+ Y+H + H +LK N++L
Sbjct: 115 A--TEFLK---QILNGVYYLHSLQ-IAHFDLKPENIML 146
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 116/290 (40%), Gaps = 44/290 (15%)
Query: 397 LGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNL 449
LG G+ G +A D + V VK + T EA ++ + L +H N+
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHMNI 105
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRS--IRAKP-----------LHWTSCLK 496
V + G LVI +Y G L N + R I +K L L
Sbjct: 106 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 165
Query: 497 IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT--- 553
+ VA+G+A++ + IH +L + N+LL R+T C
Sbjct: 166 FSYQVAKGMAFLASKN-CIHRDLAARNILLT---HGRITKICDFGLARDIKNDSNYVVKG 221
Query: 554 -----VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTM 608
V + APE + T +SDV+++G+ L EL + PY P ++ + +
Sbjct: 222 NARLPVKWMAPE-SIFNCVYTFESDVWSYGIFLWELFS---LGSSPYPGMPVDSKFYKMI 277
Query: 609 RVDDGRE----ENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ-EIKES 653
+ +G E+ + ++ C P +RP Q++++I+ +I ES
Sbjct: 278 K--EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 325
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 116/290 (40%), Gaps = 44/290 (15%)
Query: 397 LGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNL 449
LG G+ G +A D + V VK + T EA ++ + L +H N+
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHMNI 107
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRS--IRAKP-----------LHWTSCLK 496
V + G LVI +Y G L N + R I +K L L
Sbjct: 108 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 167
Query: 497 IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT--- 553
+ VA+G+A++ + IH +L + N+LL R+T C
Sbjct: 168 FSYQVAKGMAFLASKN-CIHRDLAARNILLT---HGRITKICDFGLARDIKNDSNYVVKG 223
Query: 554 -----VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTM 608
V + APE + T +SDV+++G+ L EL + PY P ++ + +
Sbjct: 224 NARLPVKWMAPE-SIFNCVYTFESDVWSYGIFLWELFS---LGSSPYPGMPVDSKFYKMI 279
Query: 609 RVDDGRE----ENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ-EIKES 653
+ +G E+ + ++ C P +RP Q++++I+ +I ES
Sbjct: 280 K--EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 327
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 112/269 (41%), Gaps = 32/269 (11%)
Query: 395 ELLGRGSIGTTYKAVLD--------NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSH 446
E LG+G+ +K V + V +K D K +E+F + + LSH
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLD--KAHRNYSESFFEAASMMSKLSH 71
Query: 447 PNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLA 506
+LV E +++ ++ GSL + +++ + W L++A+ +A +
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKN--CINILWK--LEVAKQLAWAMH 127
Query: 507 YIHRASWLIHGNLKSSNVLLGADFEARLTD--YCXXXXXXXXXXXXP-----DTVAYKAP 559
++ + LIHGN+ + N+LL + + + + + P + + + P
Sbjct: 128 FLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRL 619
E ++ + +D ++FG L E+ +G P L+ R ++ + R +
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICSGGD-------KPLSALDSQRKLQFYEDRHQLPA 239
Query: 620 GMLTEVASV---CSLKSPEQRPAMWQVLK 645
E+A++ C P+ RP+ +++
Sbjct: 240 PKAAELANLINNCMDYEPDHRPSFRAIIR 268
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 84/209 (40%), Gaps = 22/209 (10%)
Query: 396 LLGRGSIGTTYKA-VLDNHLIVTVKRFDANKT------ADTSAEAFEQHM--EAVGGLSH 446
LLG+G GT + L + L V +K N+ +D+ E + + G H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 447 PNLVPIRAYFQAK-GERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
P ++ + +F+ + G LV+ P LF+ I + P + C V +
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGP---SRCF--FGQVVAAI 152
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFE---ARLTDYCXXXXXXXXXXXXPD-TVAYKAPEI 561
+ H ++H ++K N+L+ D A+L D+ D T Y PE
Sbjct: 153 QHCHSRG-VVHRDIKDENILI--DLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEW 209
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGKHP 590
+ + V++ G+LL +++ G P
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCGDIP 238
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
G+ ++H A +IH +LK SN+++ +D ++ D+ P V Y+APE+
Sbjct: 138 GIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEV 196
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTG 587
A + D+++ G ++ EL+ G
Sbjct: 197 ILGMGYA-ANVDIWSVGCIMGELVKG 221
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 16/204 (7%)
Query: 395 ELLGRGSIGTTYKAVLDN-HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG+G+ + V K + K + + E+ L HPN+V +
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 96
Query: 454 AYFQAKGERLVIYDYQPNGSLF-NLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
+G +++D G LF +++ A H C+ + + + +IH+
Sbjct: 97 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CI---HQILESVNHIHQHD 150
Query: 513 WLIHGNLKSSNVLLGADFEA---RLTDYCXXXXXXXXXXX---XPDTVAYKAPEIRKSSR 566
++H +LK N+LL + + +L D+ T Y +PE+ +
Sbjct: 151 -IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDP 209
Query: 567 RATSKSDVYAFGVLLLELLTGKHP 590
D++A GV+L LL G P
Sbjct: 210 YG-KPVDIWACGVILYILLVGYPP 232
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 83/211 (39%), Gaps = 16/211 (7%)
Query: 388 QLMRASAELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSH 446
Q M E LG+G+ + V + K + K + + E+ L H
Sbjct: 21 QSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 80
Query: 447 PNLVPIRAYFQAKGERLVIYDYQPNGSLF-NLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
PN+V + +G +I+D G LF +++ A H C+ + + + +
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH---CI---QQILEAV 134
Query: 506 AYIHRASWLIHGNLKSSNVLLGADFEA---RLTDYCXXXXXXXXXXX---XPDTVAYKAP 559
+ H+ ++H +LK N+LL + + +L D+ T Y +P
Sbjct: 135 LHCHQMG-VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSP 193
Query: 560 EIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590
E+ + D++A GV+L LL G P
Sbjct: 194 EVLRKDPYGKP-VDLWACGVILYILLVGYPP 223
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 116/290 (40%), Gaps = 44/290 (15%)
Query: 397 LGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNL 449
LG G+ G +A D + V VK + T EA ++ + L +H N+
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHMNI 112
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRS--IRAKP-----------LHWTSCLK 496
V + G LVI +Y G L N + R I +K L L
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 497 IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT--- 553
+ VA+G+A++ + IH +L + N+LL R+T C
Sbjct: 173 FSYQVAKGMAFLASKN-CIHRDLAARNILLT---HGRITKICDFGLARHIKNDSNYVVKG 228
Query: 554 -----VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTM 608
V + APE + T +SDV+++G+ L EL + PY P ++ + +
Sbjct: 229 NARLPVKWMAPE-SIFNCVYTFESDVWSYGIFLWELFS---LGSSPYPGMPVDSKFYKMI 284
Query: 609 RVDDGRE----ENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ-EIKES 653
+ +G E+ + ++ C P +RP Q++++I+ +I ES
Sbjct: 285 K--EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 332
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 116/290 (40%), Gaps = 44/290 (15%)
Query: 397 LGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNL 449
LG G+ G +A D + V VK + T EA ++ + L +H N+
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHMNI 112
Query: 450 VPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRS--IRAKP-----------LHWTSCLK 496
V + G LVI +Y G L N + R I +K L L
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 497 IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDT--- 553
+ VA+G+A++ + IH +L + N+LL R+T C
Sbjct: 173 FSYQVAKGMAFLASKN-CIHRDLAARNILLT---HGRITKICDFGLARDIKNDSNYVVKG 228
Query: 554 -----VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTM 608
V + APE + T +SDV+++G+ L EL + PY P ++ + +
Sbjct: 229 NARLPVKWMAPE-SIFNCVYTFESDVWSYGIFLWELFS---LGSSPYPGMPVDSKFYKMI 284
Query: 609 RVDDGRE----ENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQ-EIKES 653
+ +G E+ + ++ C P +RP Q++++I+ +I ES
Sbjct: 285 K--EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 332
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 496 KIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXXXXXXXXXXXXPDT 553
K+ + + L Y+ +IH ++K SN+LL + +L D+
Sbjct: 128 KMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGC 187
Query: 554 VAYKAPEIRKSSRRATS-----KSDVYAFGVLLLELLTGKHPSQH 593
AY APE R T ++DV++ G+ L+EL TG+ P ++
Sbjct: 188 AAYMAPE-RIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + HPN++ + ++ K + ++I + G LF+ + S+ +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
T LK + G+ Y+H + H +LK N++L
Sbjct: 116 A--TEFLK---QILNGVYYLHSLQ-IAHFDLKPENIML 147
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 496 KIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA 555
KIA + + L ++H +IH ++K SNVL+ A + + D+ D
Sbjct: 140 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGC 199
Query: 556 --YKAPEI---RKSSRRATSKSDVYAFGVLLLELLTGKHP 590
Y APE + + + KSD+++ G+ +EL + P
Sbjct: 200 KPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFP 239
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 77/201 (38%), Gaps = 18/201 (8%)
Query: 397 LGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
+G GS G K + I+ K D + + + + L HPN+V Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV---RY 70
Query: 456 FQAKGER-----LVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ +R ++ +Y G L ++I R + L L++ + L HR
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQLTLALKECHR 129
Query: 511 AS----WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRK 563
S ++H +LK +NV L +L D+ V Y +PE +
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPE-QM 188
Query: 564 SSRRATSKSDVYAFGVLLLEL 584
+ KSD+++ G LL EL
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
G+ ++H A +IH +LK SN+++ +D ++ D+ P+ V Y+APE+
Sbjct: 138 GIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEV 196
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTG 587
D+++ G ++ E++ G
Sbjct: 197 -ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 33/216 (15%)
Query: 392 ASAELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP 451
A E +G+G G ++ + V VK F + D + E + L H N++
Sbjct: 11 ALVECVGKGRYGEVWRGLWHGE-SVAVKIFSSR---DEQSWFRETEIYNTVLLRHDNILG 66
Query: 452 IRAY----FQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAY 507
A + + +I Y +GSL++ + + + L L++A A GLA+
Sbjct: 67 FIASDMTSRNSSTQLWLITHYHEHGSLYDFL------QRQTLEPHLALRLAVSAACGLAH 120
Query: 508 IHRASW-------LIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXP-------DT 553
+H + + H + KS NVL+ ++ + + D T
Sbjct: 121 LHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGT 180
Query: 554 VAYKAPE-----IRKSSRRATSKSDVYAFGVLLLEL 584
Y APE IR + +D++AFG++L E+
Sbjct: 181 KRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
G+ ++H A +IH +LK SN+++ +D ++ D+ P V Y+APE+
Sbjct: 138 GIKHLHSAG-IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTG 587
D+++ GV++ E++ G
Sbjct: 197 -ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPE 560
+GL ++H A+ ++H +LK N+L+ + +L D+ P V Y+APE
Sbjct: 131 RGLDFLH-ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPE 189
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGK 588
+ S AT D+++ G + E+ K
Sbjct: 190 VLLQSTYATP-VDMWSVGCIFAEMFRRK 216
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + HPN++ + ++ K + ++I + G LF+ + S+ +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEE 115
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
T LK + G+ Y+H + H +LK N++L
Sbjct: 116 A--TEFLK---QILNGVYYLHSLQ-IAHFDLKPENIML 147
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
G+ ++H A +IH +LK SN+++ +D ++ D+ P V Y+APE+
Sbjct: 138 GIKHLHSAG-IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTG 587
D+++ GV++ E++ G
Sbjct: 197 -ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPE 560
+GL ++H A+ ++H +LK N+L+ + +L D+ P V Y+APE
Sbjct: 123 RGLDFLH-ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPE 181
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGK 588
+ S AT D+++ G + E+ K
Sbjct: 182 VLLQSTYATP-VDMWSVGCIFAEMFRRK 208
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPE 560
+GL ++H A+ ++H +LK N+L+ + +L D+ P V Y+APE
Sbjct: 123 RGLDFLH-ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPE 181
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGK 588
+ S AT D+++ G + E+ K
Sbjct: 182 VLLQSTYATP-VDMWSVGCIFAEMFRRK 208
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 77/201 (38%), Gaps = 18/201 (8%)
Query: 397 LGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAY 455
+G GS G K + I+ K D + + + + L HPN+V Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV---RY 70
Query: 456 FQAKGER-----LVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR 510
+ +R ++ +Y G L ++I R + L L++ + L HR
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQLTLALKECHR 129
Query: 511 AS----WLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA---YKAPEIRK 563
S ++H +LK +NV L +L D+ V Y +PE +
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPE-QM 188
Query: 564 SSRRATSKSDVYAFGVLLLEL 584
+ KSD+++ G LL EL
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPE 560
+GL ++H A+ ++H +LK N+L+ + +L D+ P V Y+APE
Sbjct: 123 RGLDFLH-ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPE 181
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGK 588
+ S AT D+++ G + E+ K
Sbjct: 182 VLLQSTYATP-VDMWSVGCIFAEMFRRK 208
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 28/176 (15%)
Query: 422 DANKTADTSAEAFEQHMEAVGGLSH--PNLVPIRAYFQAKGERLV--IYDYQPNGSLFNL 477
DA+ T + S A ++ + +H PN V + F+ GE L+ I Y+
Sbjct: 74 DADNTKEDSMGA-NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEH------- 125
Query: 478 IHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD------FE 531
R PL + +I++ + GL Y+HR +IH ++K NVL+ +
Sbjct: 126 -------RGIPLIYVK--QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ 176
Query: 532 ARLTDYCXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTG 587
++ D T Y++PE+ + +D+++ L+ EL+TG
Sbjct: 177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCG-ADIWSTACLIFELITG 231
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/194 (19%), Positives = 82/194 (42%), Gaps = 10/194 (5%)
Query: 398 GRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ 457
+G + Y AVLD + V +K+ T A+ + + + ++H N++ + F
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 458 AKGERLVIYDYQPNGSLFNLIHGS-RSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ + ++Q + L+ + + L + + G+ ++H A +IH
Sbjct: 94 PQK---TLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG-IIH 149
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRATSKSDV 574
+LK SN+++ +D ++ D+ P V Y+APE+ D+
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVDI 208
Query: 575 YAFGVLLLELLTGK 588
++ G ++ E++ K
Sbjct: 209 WSVGCIMGEMVRHK 222
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 28/176 (15%)
Query: 422 DANKTADTSAEAFEQHMEAVGGLSH--PNLVPIRAYFQAKGERLV--IYDYQPNGSLFNL 477
DA+ T + S A ++ + +H PN V + F+ GE L+ I Y+
Sbjct: 74 DADNTKEDSMGA-NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEH------- 125
Query: 478 IHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD------FE 531
R PL + +I++ + GL Y+HR +IH ++K NVL+ +
Sbjct: 126 -------RGIPLIYVK--QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ 176
Query: 532 ARLTDYCXXXXXXXXXXXXPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTG 587
++ D T Y++PE+ + +D+++ L+ EL+TG
Sbjct: 177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCG-ADIWSTACLIFELITG 231
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/194 (19%), Positives = 82/194 (42%), Gaps = 10/194 (5%)
Query: 398 GRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ 457
+G + Y AVLD + V +K+ T A+ + + + ++H N++ + F
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 458 AKGERLVIYDYQPNGSLFNLIHGS-RSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ + ++Q + L+ + + L + + G+ ++H A +IH
Sbjct: 94 PQK---TLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG-IIH 149
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRATSKSDV 574
+LK SN+++ +D ++ D+ P V Y+APE+ D+
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVDI 208
Query: 575 YAFGVLLLELLTGK 588
++ G ++ E++ K
Sbjct: 209 WSVGCIMGEMVRHK 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/194 (19%), Positives = 82/194 (42%), Gaps = 10/194 (5%)
Query: 398 GRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ 457
+G + Y AVLD + V +K+ T A+ + + + ++H N++ + F
Sbjct: 29 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86
Query: 458 AKGERLVIYDYQPNGSLFNLIHGS-RSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIH 516
+ + ++Q + L+ + + L + + G+ ++H A +IH
Sbjct: 87 PQK---TLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG-IIH 142
Query: 517 GNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRATSKSDV 574
+LK SN+++ +D ++ D+ P V Y+APE+ D+
Sbjct: 143 RDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVDI 201
Query: 575 YAFGVLLLELLTGK 588
++ G ++ E++ K
Sbjct: 202 WSVGCIMGEMVRHK 215
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 80/204 (39%), Gaps = 16/204 (7%)
Query: 397 LGRGSIGTTYKAV-LDNHLIVTVKRFDANKT------ADTSAEAFEQHMEAVGGLSHPNL 449
LG G+ G + AV + + V VK K D + + + H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 450 VPIRAYFQAKGE-RLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYI 508
+ + F+ +G +LV+ + LF I R L I + + Y+
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFID-----RHPRLDEPLASYIFRQLVSAVGYL 146
Query: 509 HRASWLIHGNLKSSNVLLGADFEARLTDY--CXXXXXXXXXXXXPDTVAYKAPEIRKSSR 566
R +IH ++K N+++ DF +L D+ T+ Y APE+ +
Sbjct: 147 -RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNP 205
Query: 567 RATSKSDVYAFGVLLLELLTGKHP 590
+ ++++ GV L L+ ++P
Sbjct: 206 YRGPELEMWSLGVTLYTLVFEENP 229
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
G+ ++H A +IH +LK SN+++ +D ++ D+ P V Y+APE+
Sbjct: 136 GIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEV 194
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTG 587
D+++ G ++ EL+ G
Sbjct: 195 -ILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 15/165 (9%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HPN++ ++ + V+ + G L + I +R K + + + +
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKI-----LRQKFFSEREASAVLFTITKTV 129
Query: 506 AYIHRASWLIHGNLKSSNVLL----GADFEARLTDYCXXXXXXXXXXXXPD---TVAYKA 558
Y+H A ++H +LK SN+L G R+ D+ T + A
Sbjct: 130 EYLH-AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVA 188
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHP-SQHPYLAPPDML 602
PE+ + + + D+++ GVLL +LTG P + P P ++L
Sbjct: 189 PEVLER-QGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL 232
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
G+ ++H A +IH +LK SN+++ +D ++ D+ P+ V Y+APE+
Sbjct: 138 GIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGK 588
D+++ G ++ E++ K
Sbjct: 197 -ILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 398 GRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ 457
+G + Y AVLD + V +K+ T A+ + + + ++H N++ + F
Sbjct: 29 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86
Query: 458 AKGERLVIYDYQPNGSLFNLIHGS--RSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ + ++Q + L+ + + I+ + H + + + G+ ++H A +I
Sbjct: 87 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-GIKHLHSAG-II 141
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRATSKSD 573
H +LK SN+++ +D ++ D+ P V Y+APE+ D
Sbjct: 142 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVD 200
Query: 574 VYAFGVLLLELLTGK 588
+++ G ++ E++ K
Sbjct: 201 IWSVGCIMGEMVRHK 215
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 398 GRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ 457
+G + Y AVLD + V +K+ T A+ + + + ++H N++ + F
Sbjct: 37 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 94
Query: 458 AKGERLVIYDYQPNGSLFNLIHGS--RSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ + ++Q + L+ + + I+ + H + + + G+ ++H A +I
Sbjct: 95 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-GIKHLHSAG-II 149
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRATSKSD 573
H +LK SN+++ +D ++ D+ P V Y+APE+ D
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVD 208
Query: 574 VYAFGVLLLELLTGK 588
+++ G ++ E++ K
Sbjct: 209 IWSVGCIMGEMVRHK 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 398 GRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ 457
+G + Y AVLD + V +K+ T A+ + + + ++H N++ + F
Sbjct: 35 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 92
Query: 458 AKGERLVIYDYQPNGSLFNLIHGS--RSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ + ++Q + L+ + + I+ + H + + + G+ ++H A +I
Sbjct: 93 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-GIKHLHSAG-II 147
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRATSKSD 573
H +LK SN+++ +D ++ D+ P V Y+APE+ D
Sbjct: 148 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVD 206
Query: 574 VYAFGVLLLELLTGK 588
+++ G ++ E++ K
Sbjct: 207 IWSVGCIMGEMVRHK 221
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 398 GRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ 457
+G + Y AVLD + V +K+ T A+ + + + ++H N++ + F
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 458 AKGERLVIYDYQPNGSLFNLIHGS--RSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ + ++Q + L+ + + I+ + H + + + G+ ++H A +I
Sbjct: 94 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-GIKHLHSAG-II 148
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRATSKSD 573
H +LK SN+++ +D ++ D+ P V Y+APE+ D
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVD 207
Query: 574 VYAFGVLLLELLTGK 588
+++ G ++ E++ K
Sbjct: 208 IWSVGCIMGEMVRHK 222
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 398 GRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ 457
+G + Y AVLD + V +K+ T A+ + + + ++H N++ + F
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 458 AKGERLVIYDYQPNGSLFNLIHGS--RSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ + ++Q + L+ + + I+ + H + + + G+ ++H A +I
Sbjct: 94 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-GIKHLHSAG-II 148
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRATSKSD 573
H +LK SN+++ +D ++ D+ P V Y+APE+ D
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVD 207
Query: 574 VYAFGVLLLELLTGK 588
+++ G ++ E++ K
Sbjct: 208 IWSVGCIMGEMVRHK 222
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 432 EAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHW 491
E E+ + + + HPN++ + ++ + + ++I + G LF+ + S+ +
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEA-- 117
Query: 492 TSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
TS +K + G+ Y+H + H +LK N++L
Sbjct: 118 TSFIK---QILDGVNYLHTKK-IAHFDLKPENIML 148
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 398 GRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ 457
+G + Y AVLD + V +K+ T A+ + + + ++H N++ + F
Sbjct: 30 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 87
Query: 458 AKGERLVIYDYQPNGSLFNLIHGS--RSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ + ++Q + L+ + + I+ + H + + + G+ ++H A +I
Sbjct: 88 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-GIKHLHSAG-II 142
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRATSKSD 573
H +LK SN+++ +D ++ D+ P V Y+APE+ D
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVD 201
Query: 574 VYAFGVLLLELLTGK 588
+++ G ++ E++ K
Sbjct: 202 IWSVGCIMGEMVRHK 216
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
G+ ++H A +IH +LK SN+++ +D ++ D+ P V Y+APE+
Sbjct: 139 GIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTG 587
D+++ G ++ E++ G
Sbjct: 198 -ILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 398 GRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ 457
+G + Y AVLD + V +K+ T A+ + + + ++H N++ + F
Sbjct: 37 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 94
Query: 458 AKGERLVIYDYQPNGSLFNLIHGS--RSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ + ++Q + L+ + + I+ + H + + + G+ ++H A +I
Sbjct: 95 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-GIKHLHSAG-II 149
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRATSKSD 573
H +LK SN+++ +D ++ D+ P V Y+APE+ D
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVD 208
Query: 574 VYAFGVLLLELLTGK 588
+++ G ++ E++ K
Sbjct: 209 IWSVGCIMGEMVRHK 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 398 GRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ 457
+G + Y AVLD + V +K+ T A+ + + + ++H N++ + F
Sbjct: 30 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 87
Query: 458 AKGERLVIYDYQPNGSLFNLIHGS--RSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ + ++Q + L+ + + I+ + H + + + G+ ++H A +I
Sbjct: 88 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-GIKHLHSAG-II 142
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRATSKSD 573
H +LK SN+++ +D ++ D+ P V Y+APE+ D
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVD 201
Query: 574 VYAFGVLLLELLTGK 588
+++ G ++ E++ K
Sbjct: 202 IWSVGCIMGEMVRHK 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 398 GRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ 457
+G + Y AVLD + V +K+ T A+ + + + ++H N++ + F
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 458 AKGERLVIYDYQPNGSLFNLIHGS--RSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ + ++Q + L+ + + I+ + H + + + G+ ++H A +I
Sbjct: 94 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-GIKHLHSAG-II 148
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRATSKSD 573
H +LK SN+++ +D ++ D+ P V Y+APE+ D
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVD 207
Query: 574 VYAFGVLLLELLTGK 588
+++ G ++ E++ K
Sbjct: 208 IWSVGCIMGEMVRHK 222
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
G+ ++H A +IH +LK SN+++ +D ++ D+ P V Y+APE+
Sbjct: 138 GIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTG 587
D+++ G ++ E++ G
Sbjct: 197 -ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
G+ ++H A +IH +LK SN+++ +D ++ D+ P V Y+APE+
Sbjct: 138 GIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTG 587
D+++ G ++ E++ G
Sbjct: 197 -ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
G+ ++H A +IH +LK SN+++ +D ++ D+ P V Y+APE+
Sbjct: 138 GIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTG 587
D+++ G ++ E++ G
Sbjct: 197 -ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
G+ ++H A +IH +LK SN+++ +D ++ D+ P V Y+APE+
Sbjct: 140 GIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEV 198
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTG 587
D+++ G ++ E++ G
Sbjct: 199 -ILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 398 GRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ 457
+G + Y AVLD + V +K+ T A+ + + + ++H N++ + F
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 458 AKGERLVIYDYQPNGSLFNLIHGS--RSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ + ++Q + L+ + + I+ + H + + + G+ ++H A +I
Sbjct: 94 PQK---TLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLC-GIKHLHSAG-II 148
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRATSKSD 573
H +LK SN+++ +D ++ D+ P V Y+APE+ D
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVD 207
Query: 574 VYAFGVLLLELLTGK 588
+++ G ++ E++ K
Sbjct: 208 IWSVGCIMGEMVRHK 222
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 14/174 (8%)
Query: 423 ANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSR 482
A K + + E + + + HPN+V + +++ G +I G LF+ R
Sbjct: 52 AKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD-----R 106
Query: 483 SIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVL---LGADFEARLTDYCX 539
+ ++ V + Y+H ++H +LK N+L L D + ++D+
Sbjct: 107 IVEKGFYTERDASRLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGL 165
Query: 540 XXXXX--XXXXXXPDTVAYKAPEIRKSSRRATSKS-DVYAFGVLLLELLTGKHP 590
T Y APE+ +++ SK+ D ++ GV+ LL G P
Sbjct: 166 SKMEDPGSVLSTACGTPGYVAPEVL--AQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
G+ ++H A +IH +LK SN+++ +D ++ D+ P V Y+APE+
Sbjct: 138 GIKHLHSAG-IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTG 587
D+++ G ++ E++ G
Sbjct: 197 -ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
G+ ++H A +IH +LK SN+++ +D ++ D+ P V Y+APE+
Sbjct: 138 GIKHLHSAG-IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTG 587
D+++ G ++ E++ G
Sbjct: 197 -ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
G+ ++H A +IH +LK SN+++ +D ++ D+ P V Y+APE+
Sbjct: 138 GIKHLHSAG-IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTG 587
D+++ G ++ E++ G
Sbjct: 197 -ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 398 GRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ 457
+G + Y AVLD + V +K+ T A+ + + + ++H N++ + F
Sbjct: 74 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131
Query: 458 AKGERLVIYDYQPNGSLFNLIHGS--RSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ + ++Q + L+ + + I+ + H + + + G+ ++H A +I
Sbjct: 132 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-GIKHLHSAG-II 186
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRATSKSD 573
H +LK SN+++ +D ++ D+ P V Y+APE+ D
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVD 245
Query: 574 VYAFGVLLLELLTGK 588
+++ G ++ E++ K
Sbjct: 246 IWSVGCIMGEMVRHK 260
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 73/190 (38%), Gaps = 42/190 (22%)
Query: 488 PLHWTSCLKIAEDVAQGLAYIHRASW-LIHGNLKSSNVLLGADFEARLTDYCXXXXXXXX 546
PL + LKI + + ++HR +IH +LK N+LL +L D+
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDF----GSATT 187
Query: 547 XXXXPD-------------------TVAYKAPEIRK--SSRRATSKSDVYAFGVLLLELL 585
PD T Y+ PEI S+ K D++A G +L L
Sbjct: 188 ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLC 247
Query: 586 TGKHPSQHPYLAPPDMLEWVRTMRVDDGR-----EENRLGMLTEVASVCSLKSPEQRPAM 640
+HP E +R+ +G+ + + + + +PE+R ++
Sbjct: 248 FRQHP-----------FEDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSI 296
Query: 641 WQVLKMIQEI 650
+V+ +QEI
Sbjct: 297 AEVVHQLQEI 306
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 398 GRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ 457
+G + Y AVLD + V +K+ T A+ + + + ++H N++ + F
Sbjct: 74 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131
Query: 458 AKGERLVIYDYQPNGSLFNLIHGS--RSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515
+ + ++Q + L+ + + I+ + H + + + G+ ++H A +I
Sbjct: 132 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-GIKHLHSAG-II 186
Query: 516 HGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRATSKSD 573
H +LK SN+++ +D ++ D+ P V Y+APE+ D
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGYKENVD 245
Query: 574 VYAFGVLLLELLTGK 588
+++ G ++ E++ K
Sbjct: 246 IWSVGCIMGEMVRHK 260
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
G+ ++H A +IH +LK SN+++ +D ++ D+ P+ V Y+APE+
Sbjct: 138 GIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGK 588
D+++ G ++ E++ K
Sbjct: 197 -ILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 15/165 (9%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HPN++ ++ + V+ + G L + I +R K + + + +
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKI-----LRQKFFSEREASAVLFTITKTV 129
Query: 506 AYIHRASWLIHGNLKSSNVLL----GADFEARLTDYCXXXXXXXXXXXXPD---TVAYKA 558
Y+H A ++H +LK SN+L G R+ D+ T + A
Sbjct: 130 EYLH-AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVA 188
Query: 559 PEIRKSSRRATSKSDVYAFGVLLLELLTGKHP-SQHPYLAPPDML 602
PE+ + + + D+++ GVLL LTG P + P P ++L
Sbjct: 189 PEVLER-QGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEIL 232
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 40/215 (18%)
Query: 396 LLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LLG G+ G A IV +K+ E F++ + A+ L + I
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKI----------EPFDKPLFALRTLRE---IKILK 64
Query: 455 YFQAKGERLV-IYDYQPNGSL--FNLIHGSRSIRAKPLHWT-SCLKIAEDVAQGLAY--- 507
+F K E ++ I++ Q S FN ++ + + LH S +++D Q Y
Sbjct: 65 HF--KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 508 ----IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD----------- 552
+ S +IH +LK SN+L+ ++ + ++ D+ +
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEX 182
Query: 553 --TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELL 585
T Y+APE+ +S + + DV++ G +L EL
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 40/215 (18%)
Query: 396 LLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LLG G+ G A IV +K+ E F++ + A+ L + I
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKI----------EPFDKPLFALRTLRE---IKILK 64
Query: 455 YFQAKGERLV-IYDYQPNGSL--FNLIHGSRSIRAKPLHWT-SCLKIAEDVAQGLAY--- 507
+F K E ++ I++ Q S FN ++ + + LH S +++D Q Y
Sbjct: 65 HF--KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 508 ----IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD----------- 552
+ S +IH +LK SN+L+ ++ + ++ D+ +
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEF 182
Query: 553 --TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELL 585
T Y+APE+ +S + + DV++ G +L EL
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 396 LLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRA 454
LLG G+ G A IV +K+ E F++ + A+ L + I
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKI----------EPFDKPLFALRTLRE---IKILK 64
Query: 455 YFQAKGERLVIYDYQPNGSL--FNLIHGSRSIRAKPLHWT-SCLKIAEDVAQGLAY---- 507
+F+ + + I++ Q S FN ++ + + LH S +++D Q Y
Sbjct: 65 HFKHEN-IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 508 ---IHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPD------------ 552
+ S +IH +LK SN+L+ ++ + ++ D+ +
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYV 183
Query: 553 -TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELL 585
T Y+APE+ +S + + DV++ G +L EL
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGA-DFEARLTDYCXXXXXXXXXXXXPD------TVA 555
+GL YIH A+ ++H +LK +N+ + D ++ D+ T
Sbjct: 131 RGLKYIHSAN-VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKW 189
Query: 556 YKAPEIRKSSRRATSKSDVYAFGVLLLELLTGK 588
Y++P + S T D++A G + E+LTGK
Sbjct: 190 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 83/205 (40%), Gaps = 18/205 (8%)
Query: 395 ELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E +G+G+ + V L K + K + + E+ L H N+V +
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLH 69
Query: 454 AYFQAKGERLVIYDYQPNGSLF-NLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
+G +++D G LF +++ A H C+ + + + + + H+
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CI---QQILEAVLHCHQMG 123
Query: 513 WLIHGNLKSSNVLLGADFEA---RLTDYCXXXXXXXXXXX---XPDTVAYKAPEIRKSSR 566
++H +LK N+LL + + +L D+ T Y +PE+ + +
Sbjct: 124 -VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR--K 180
Query: 567 RATSK-SDVYAFGVLLLELLTGKHP 590
A K D++A GV+L LL G P
Sbjct: 181 EAYGKPVDIWACGVILYILLVGYPP 205
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 14/136 (10%)
Query: 463 LVIYDYQPNGSLFNLIHGSRSIR---AKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNL 519
L++ +P LF+ I +++ A+ W V + + + H ++H ++
Sbjct: 133 LILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLEAVRHCHNCG-VLHRDI 183
Query: 520 KSSNVLLGADF-EARLTDYCXXXXXXXXXXXXPD-TVAYKAPEIRKSSRRATSKSDVYAF 577
K N+L+ + E +L D+ D T Y PE + R + V++
Sbjct: 184 KDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 243
Query: 578 GVLLLELLTGKHPSQH 593
G+LL +++ G P +H
Sbjct: 244 GILLYDMVCGDIPFEH 259
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 14/164 (8%)
Query: 433 AFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT 492
+ E + + + HPN+V + +++ G +I G LF+ R +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD-----RIVEKGFYTER 116
Query: 493 SCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVL---LGADFEARLTDYCXXXXXX--XXX 547
++ V + Y+H ++H +LK N+L L D + ++D+
Sbjct: 117 DASRLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 175
Query: 548 XXXPDTVAYKAPEIRKSSRRATSKS-DVYAFGVLLLELLTGKHP 590
T Y APE+ +++ SK+ D ++ GV+ LL G P
Sbjct: 176 STACGTPGYVAPEVL--AQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 14/164 (8%)
Query: 433 AFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT 492
+ E + + + HPN+V + +++ G +I G LF+ R +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD-----RIVEKGFYTER 116
Query: 493 SCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVL---LGADFEARLTDYCXXXXXX--XXX 547
++ V + Y+H ++H +LK N+L L D + ++D+
Sbjct: 117 DASRLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 175
Query: 548 XXXPDTVAYKAPEIRKSSRRATSKS-DVYAFGVLLLELLTGKHP 590
T Y APE+ +++ SK+ D ++ GV+ LL G P
Sbjct: 176 STACGTPGYVAPEVL--AQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 16/204 (7%)
Query: 395 ELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG+G+ + + + K + K + + E+ L HPN+V +
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 454 AYFQAKGERLVIYDYQPNGSLF-NLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
+G +++D G LF +++ A H C+ + + + + + H +
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CI---QQILESVNHCH-LN 122
Query: 513 WLIHGNLKSSNVLLGADFEA---RLTDYCXXXXXXXXXXX---XPDTVAYKAPEIRKSSR 566
++H +LK N+LL + + +L D+ T Y +PE+ +
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 567 RATSKSDVYAFGVLLLELLTGKHP 590
D++A GV+L LL G P
Sbjct: 183 YGKP-VDMWACGVILYILLVGYPP 205
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 14/164 (8%)
Query: 433 AFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWT 492
+ E + + + HPN+V + +++ G +I G LF+ R +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD-----RIVEKGFYTER 116
Query: 493 SCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVL---LGADFEARLTDYCXXXXXX--XXX 547
++ V + Y+H ++H +LK N+L L D + ++D+
Sbjct: 117 DASRLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 175
Query: 548 XXXPDTVAYKAPEIRKSSRRATSKS-DVYAFGVLLLELLTGKHP 590
T Y APE+ +++ SK+ D ++ GV+ LL G P
Sbjct: 176 STACGTPGYVAPEVL--AQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 81/204 (39%), Gaps = 16/204 (7%)
Query: 395 ELLGRGSIGTTYKAV-LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIR 453
E LG+G+ + + + K + K + + E+ L HPN+V +
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 454 AYFQAKGERLVIYDYQPNGSLF-NLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS 512
+G +++D G LF +++ A H C+ + + + + + H +
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CI---QQILESVNHCH-LN 122
Query: 513 WLIHGNLKSSNVLLGADFEA---RLTDYCXXXXXXXXXXX---XPDTVAYKAPEIRKSSR 566
++H +LK N+LL + + +L D+ T Y +PE+ +
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 567 RATSKSDVYAFGVLLLELLTGKHP 590
D++A GV+L LL G P
Sbjct: 183 YGKP-VDMWACGVILYILLVGYPP 205
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 73/177 (41%), Gaps = 20/177 (11%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HPN++ ++ + ++ + G L + I +R K + + + +
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKI-----LRQKFFSEREASFVLHTIGKTV 134
Query: 506 AYIHRASWLIHGNLKSSNVLL----GADFEARLTDYCXXXXXXXXXXXXPD---TVAYKA 558
Y+H + ++H +LK SN+L G R+ D+ T + A
Sbjct: 135 EYLH-SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVA 193
Query: 559 PEIRKSSRRATSKS-DVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGR 614
PE+ K R+ + D+++ G+LL +L G P + P D E + T R+ G+
Sbjct: 194 PEVLK--RQGYDEGCDIWSLGILLYTMLAGYTPFAN---GPSDTPEEILT-RIGSGK 244
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
G+ ++H A +IH +LK SN+++ +D ++ D+ P V Y+APE+
Sbjct: 143 GIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 201
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGK 588
D+++ G ++ E++ K
Sbjct: 202 -ILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 73/177 (41%), Gaps = 20/177 (11%)
Query: 446 HPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505
HPN++ ++ + ++ + G L + I +R K + + + +
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKI-----LRQKFFSEREASFVLHTIGKTV 134
Query: 506 AYIHRASWLIHGNLKSSNVLL----GADFEARLTDYCXXXXXXXXXXXXPD---TVAYKA 558
Y+H + ++H +LK SN+L G R+ D+ T + A
Sbjct: 135 EYLH-SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVA 193
Query: 559 PEIRKSSRRATSKS-DVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGR 614
PE+ K R+ + D+++ G+LL +L G P + P D E + T R+ G+
Sbjct: 194 PEVLK--RQGYDEGCDIWSLGILLYTMLAGYTPFAN---GPSDTPEEILT-RIGSGK 244
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 504 GLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEI 561
G+ ++H A +IH +LK SN+++ +D ++ D+ P V Y+APE+
Sbjct: 132 GIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 562 RKSSRRATSKSDVYAFGVLLLELLTGK 588
D+++ G ++ E++ K
Sbjct: 191 -ILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 496 KIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD 529
KI + V QGL Y+H +IH ++K N+LL +
Sbjct: 150 KIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN 183
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 496 KIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD 529
KI + V QGL Y+H +IH ++K N+LL +
Sbjct: 134 KIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN 167
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + H N++ + ++ + + ++I + G LF+ + S+ +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE 116
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
TS +K + G+ Y+H + H +LK N++L
Sbjct: 117 A--TSFIK---QILDGVNYLHTKK-IAHFDLKPENIML 148
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + H N++ + ++ + + ++I + G LF+ + S+ +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE 116
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
TS +K + G+ Y+H + H +LK N++L
Sbjct: 117 A--TSFIK---QILDGVNYLHTKK-IAHFDLKPENIML 148
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + H N++ + ++ + + ++I + G LF+ + S+ +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE 116
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
TS +K + G+ Y+H + H +LK N++L
Sbjct: 117 A--TSFIK---QILDGVNYLHTKK-IAHFDLKPENIML 148
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 78/191 (40%), Gaps = 27/191 (14%)
Query: 410 LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSH---PNLVPIRAYFQAKGERLVIY 466
L N+L F NK A E ++ ME GL P L + + E
Sbjct: 119 LSNYLKSKRDLFFLNKDAALHMEPKKEKMEP--GLEQGKKPRLDSVTS-----SESFASS 171
Query: 467 DYQPNGSLFNLIH--GSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNV 524
+Q + SL ++ S +P+ + + VA+G+ ++ IH +L + N+
Sbjct: 172 GFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLSSRK-CIHRDLAARNI 230
Query: 525 LLGADFEARLTDYCXXXXXXXXXXXXPDTV---------AYKAPEIRKSSRRATSKSDVY 575
LL + ++ D+ PD V + APE + ++KSDV+
Sbjct: 231 LLSENNVVKICDF----GLARDIYKNPDYVRKGDTRLPLKWMAPE-SIFDKIYSTKSDVW 285
Query: 576 AFGVLLLELLT 586
++GVLL E+ +
Sbjct: 286 SYGVLLWEIFS 296
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + H N++ + ++ + + ++I + G LF+ + S+ +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE 116
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
TS +K + G+ Y+H + H +LK N++L
Sbjct: 117 A--TSFIK---QILDGVNYLHTKK-IAHFDLKPENIML 148
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 494 CLK-IAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD 529
C+K I V QGL Y+H +IH ++K N+L+ D
Sbjct: 141 CVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVD 177
>pdb|3R8R|A Chain A, Transaldolase From Bacillus Subtilis
pdb|3R8R|B Chain B, Transaldolase From Bacillus Subtilis
pdb|3R8R|C Chain C, Transaldolase From Bacillus Subtilis
pdb|3R8R|D Chain D, Transaldolase From Bacillus Subtilis
pdb|3R8R|E Chain E, Transaldolase From Bacillus Subtilis
pdb|3R8R|F Chain F, Transaldolase From Bacillus Subtilis
pdb|3R8R|G Chain G, Transaldolase From Bacillus Subtilis
pdb|3R8R|H Chain H, Transaldolase From Bacillus Subtilis
pdb|3R8R|I Chain I, Transaldolase From Bacillus Subtilis
pdb|3R8R|J Chain J, Transaldolase From Bacillus Subtilis
pdb|3R8R|V Chain V, Transaldolase From Bacillus Subtilis
pdb|3R8R|K Chain K, Transaldolase From Bacillus Subtilis
pdb|3R8R|L Chain L, Transaldolase From Bacillus Subtilis
pdb|3R8R|M Chain M, Transaldolase From Bacillus Subtilis
pdb|3R8R|N Chain N, Transaldolase From Bacillus Subtilis
pdb|3R8R|W Chain W, Transaldolase From Bacillus Subtilis
pdb|3R8R|P Chain P, Transaldolase From Bacillus Subtilis
pdb|3R8R|R Chain R, Transaldolase From Bacillus Subtilis
pdb|3R8R|T Chain T, Transaldolase From Bacillus Subtilis
pdb|3R8R|U Chain U, Transaldolase From Bacillus Subtilis
Length = 212
Score = 32.0 bits (71), Expect = 1.00, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 601 MLEWVRTMRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQE-IKESVMAE 657
ML +V T +D+ RE N LG+L V + SL + E + L+ I + +K SV AE
Sbjct: 1 MLFFVDTANIDEIREANELGILAGVTTNPSLVAKEANVSFHDRLREITDVVKGSVSAE 58
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXXXXXXXXXXXXPDTVAYKAPE 560
+GL ++H + ++H +LK N+L+ + + +L D+ T+ Y+APE
Sbjct: 131 RGLDFLH-SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGK 588
+ S AT D+++ G + E+ K
Sbjct: 190 VLLQSSYATP-VDLWSVGCIFAEMFRRK 216
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 429 TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKP 488
S E E+ + + + H N++ + ++ + + ++I + G LF+ + S+ +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE 116
Query: 489 LHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL 526
TS +K + G+ Y+H + H +LK N++L
Sbjct: 117 A--TSFIK---QILDGVNYLHTKK-IAHFDLKPENIML 148
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXXXXXXXXXXXXPDTVAYKAPE 560
+GL ++H + ++H +LK N+L+ + + +L D+ T+ Y+APE
Sbjct: 131 RGLDFLH-SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGK 588
+ S AT D+++ G + E+ K
Sbjct: 190 VLLQSSYATP-VDLWSVGCIFAEMFRRK 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDY--CXXXXXXXXXXXXPDTVAYKAPE 560
+GL ++H + ++H +LK N+L+ + + +L D+ T+ Y+APE
Sbjct: 131 RGLDFLH-SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGK 588
+ S AT D+++ G + E+ K
Sbjct: 190 VLLQSSYATP-VDLWSVGCIFAEMFRRK 216
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 147 RLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQ--PFLVVFNVSGNNL 204
+T+L+L++N L L N T +L SL + +N S P L Q P L V N+ N L
Sbjct: 36 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 95
Query: 205 T 205
+
Sbjct: 96 S 96
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 79/208 (37%), Gaps = 20/208 (9%)
Query: 396 LLGRGSIGTTYKAVLDNHLIVTVKRF----DANKTADTSAEAFE-----QHMEAVGGLSH 446
+ GS G V + V +KR +T + +++F + + + H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 447 PNLVPIRAYF----QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVA 502
PN++ +R F + +L + L +IH R I P H + +
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVISPQHIQYFMY---HIL 144
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPE 560
GL +H A ++H +L N+LL + + + D+ Y+APE
Sbjct: 145 LGLHVLHEAG-VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPE 203
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGK 588
+ + T D+++ G ++ E+ K
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 147 RLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQ--PFLVVFNVSGNNL 204
+T+L+L++N L L N T +L SL + +N S P L Q P L V N+ N L
Sbjct: 31 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 90
Query: 205 T 205
+
Sbjct: 91 S 91
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 148 LTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQ--PFLVVFNVSGNNLT 205
+T+L+L++N L L N T +L SL + +N S P L Q P L V N+ N L+
Sbjct: 27 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 86
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 79/208 (37%), Gaps = 20/208 (9%)
Query: 396 LLGRGSIGTTYKAVLDNHLIVTVKRF----DANKTADTSAEAFE-----QHMEAVGGLSH 446
+ GS G V + V +KR +T + +++F + + + H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 447 PNLVPIRAYF----QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVA 502
PN++ +R F + +L + L +IH R I P H + +
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVISPQHIQYFMY---HIL 144
Query: 503 QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPE 560
GL +H A ++H +L N+LL + + + D+ Y+APE
Sbjct: 145 LGLHVLHEAG-VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPE 203
Query: 561 IRKSSRRATSKSDVYAFGVLLLELLTGK 588
+ + T D+++ G ++ E+ K
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Query: 464 VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSN 523
VI +Y P+ L RS R+ P++ S + + + +IH + H ++K N
Sbjct: 115 VIMEYVPDTLHKVLKSFIRSGRSIPMNLISIY--IYQLFRAVGFIHSLG-ICHRDIKPQN 171
Query: 524 VLLGA-DFEARLTDYCXXXXXXXXXXXXPDTVA--YKAPEIRKSSRRATSKSDVYAFGVL 580
+L+ + D +L D+ + Y+APE+ + T D+++ G +
Sbjct: 172 LLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCV 231
Query: 581 LLELLTGK 588
EL+ GK
Sbjct: 232 FGELILGK 239
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 148 LTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQ--PFLVVFNVSGNNLT 205
+T+L+L++N L L P N T +L L +N S P L Q P L V N+ N L+
Sbjct: 27 ITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELS 86
>pdb|3PE3|A Chain A, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3PE3|B Chain B, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3PE3|C Chain C, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3PE3|D Chain D, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3PE4|A Chain A, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3PE4|C Chain C, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3TAX|A Chain A, A Neutral Diphosphate Mimic Crosslinks The Active Site Of
Human O- Glcnac Transferase
pdb|3TAX|C Chain C, A Neutral Diphosphate Mimic Crosslinks The Active Site Of
Human O- Glcnac Transferase
pdb|4AY5|A Chain A, Human O-Glcnac Transferase (Ogt) In Complex With Udp And
Glycopeptide
pdb|4AY5|B Chain B, Human O-Glcnac Transferase (Ogt) In Complex With Udp And
Glycopeptide
pdb|4AY5|C Chain C, Human O-Glcnac Transferase (Ogt) In Complex With Udp And
Glycopeptide
pdb|4AY5|D Chain D, Human O-Glcnac Transferase (Ogt) In Complex With Udp And
Glycopeptide
pdb|4AY6|A Chain A, Human O-Glcnac Transferase (Ogt) In Complex With
Udp-5sglcnac And Substrate Peptide
pdb|4AY6|B Chain B, Human O-Glcnac Transferase (Ogt) In Complex With
Udp-5sglcnac And Substrate Peptide
pdb|4AY6|C Chain C, Human O-Glcnac Transferase (Ogt) In Complex With
Udp-5sglcnac And Substrate Peptide
pdb|4AY6|D Chain D, Human O-Glcnac Transferase (Ogt) In Complex With
Udp-5sglcnac And Substrate Peptide
pdb|4GYW|A Chain A, Crystal Structure Of Human O-Glcnac Transferase In Complex
With Udp And A Glycopeptide
pdb|4GYW|C Chain C, Crystal Structure Of Human O-Glcnac Transferase In Complex
With Udp And A Glycopeptide
pdb|4GYY|A Chain A, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac And A Peptide Substrate
pdb|4GYY|C Chain C, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac And A Peptide Substrate
pdb|4GZ3|A Chain A, Crystal Structure Of Human O-Glcnac Transferase With Udp
And A Thioglycopeptide
pdb|4GZ3|C Chain C, Crystal Structure Of Human O-Glcnac Transferase With Udp
And A Thioglycopeptide
pdb|4GZ5|A Chain A, Crystal Structure Of Human O-Glcnac Transferase With
Udp-Glcnac
pdb|4GZ5|B Chain B, Crystal Structure Of Human O-Glcnac Transferase With
Udp-Glcnac
pdb|4GZ5|C Chain C, Crystal Structure Of Human O-Glcnac Transferase With
Udp-Glcnac
pdb|4GZ5|D Chain D, Crystal Structure Of Human O-Glcnac Transferase With
Udp-Glcnac
pdb|4GZ6|A Chain A, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac
pdb|4GZ6|B Chain B, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac
pdb|4GZ6|C Chain C, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac
pdb|4GZ6|D Chain D, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac
Length = 723
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 12/73 (16%)
Query: 214 LLKFDASSFSMNPNLCGKVINKAC-RPRSPFFESPNATSPPRPLGQSAQSQGI----LVL 268
L K D S+ M N+ +V N R P PN + Q AQ+ G+ ++
Sbjct: 532 LYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPN-------IQQYAQNMGLPQNRIIF 584
Query: 269 SPPSPRNDHKRRG 281
SP +P+ +H RRG
Sbjct: 585 SPVAPKEEHVRRG 597
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 137 AFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPP---LNQPF 193
+ PL +L LT+LD+S+N LT L L L L L L+ N T+PP P
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPK 149
Query: 194 LVVFNVSGNNLT 205
L +++ NNLT
Sbjct: 150 LEKLSLANNNLT 161
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 137 AFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPP---LNQPF 193
+ PL +L LT+LD+S+N LT L L L L L L+ N T+PP P
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPK 149
Query: 194 LVVFNVSGNNLT 205
L +++ NNLT
Sbjct: 150 LEKLSLANNNLT 161
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 49/131 (37%), Gaps = 36/131 (27%)
Query: 31 SLLPSDAVSLLSFKSKADSENKLLYALNERFDYCQWQGVKCAQGRVVRFVLQSFGLRGTF 90
+LL +S S D EN+++ + ++D W + + LQ F +
Sbjct: 191 ALLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSN-------LQIFNISAN- 242
Query: 91 PPNTLTRLDQLRVLSLHNNSLTGPIPDXXXXXXXXXXXXXRNFFSGAFPLSILSLHRLTI 150
+ + D L L L+ NSLT P I +L L +
Sbjct: 243 ----IFKYDFLTRLYLNGNSLT------------------------ELPAEIKNLSNLRV 274
Query: 151 LDLSYNNLTGL 161
LDLS+N LT L
Sbjct: 275 LDLSHNRLTSL 285
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 137 AFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPP---LNQPF 193
+ PL +L LT+LD+S+N LT L L L L L L+ N T+PP P
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPK 149
Query: 194 LVVFNVSGNNLT 205
L +++ NNLT
Sbjct: 150 LEKLSLANNNLT 161
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 137 AFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPP---LNQPF 193
+ PL +L LT+LD+S+N LT L L L L L L+ N T+PP P
Sbjct: 92 SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPK 150
Query: 194 LVVFNVSGNNLT 205
L +++ NNLT
Sbjct: 151 LEKLSLANNNLT 162
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 137 AFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPP---LNQPF 193
+ PL +L LT+LD+S+N LT L L L L L L+ N T+PP P
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPK 149
Query: 194 LVVFNVSGNNLT 205
L +++ NNLT
Sbjct: 150 LEKLSLANNNLT 161
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 23/144 (15%)
Query: 464 VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSN 523
++++ GS+ + IH R + +DVA L ++H + H +LK N
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNE-----LEASVVVQDVASALDFLHNKG-IAHRDLKPEN 141
Query: 524 VLLGADFE---ARLTDYCXXXXXXXXXXXXP----------DTVAYKAPEIRKSSRRATS 570
+L + ++ D+ P + Y APE+ ++ S
Sbjct: 142 ILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEAS 201
Query: 571 ----KSDVYAFGVLLLELLTGKHP 590
+ D+++ GV+L LL+G P
Sbjct: 202 IYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 144 SLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPF---LVVFNVS 200
+LHRL +L++S+NNL L + L L +L +NR + L Q F L FN++
Sbjct: 495 TLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGIL-QHFPKSLAFFNLT 553
Query: 201 GNNL 204
N++
Sbjct: 554 NNSV 557
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 144 SLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPF---LVVFNVS 200
+LHRL +L++S+NNL L + L L +L +NR + L Q F L FN++
Sbjct: 490 TLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGIL-QHFPKSLAFFNLT 548
Query: 201 GNNL 204
N++
Sbjct: 549 NNSV 552
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 23/144 (15%)
Query: 464 VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSN 523
++++ GS+ + IH R + +DVA L ++H + H +LK N
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNE-----LEASVVVQDVASALDFLHNKG-IAHRDLKPEN 141
Query: 524 VLLGADFE---ARLTDYCXXXXXXXXXXXXP----------DTVAYKAPEIRKSSRRATS 570
+L + ++ D+ P + Y APE+ ++ S
Sbjct: 142 ILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEAS 201
Query: 571 ----KSDVYAFGVLLLELLTGKHP 590
+ D+++ GV+L LL+G P
Sbjct: 202 IYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 102 RVLSLHNNSLTGPIPDXXXXXXXXXXXXXRNFFSGAFPLSIL-SLHRLTILDLSYNNLTG 160
++L LH+N +T P + GA P+ + SL +LT+LDL N LT
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLT- 101
Query: 161 LIPVNLTALDRLYSLK 176
++P DRL LK
Sbjct: 102 VLPS--AVFDRLVHLK 115
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 137 AFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPP---LNQPF 193
+ PL +L LT+LD+S+N LT L L L L L L+ N T+PP P
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPK 149
Query: 194 LVVFNVSGNNLT 205
L +++ N+LT
Sbjct: 150 LEKLSLANNDLT 161
>pdb|1V5E|A Chain A, Crystal Structure Of Pyruvate Oxidase Containing Fad, From
Aerococcus Viridans
pdb|2DJI|A Chain A, Crystal Structure Of Pyruvate Oxidase From Aerococcus
Viridans Containing Fad
Length = 590
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Query: 383 VYSLEQLMRASAELLGRGSIGTTY----KAVLDNHLIVTVKRFDANKTADTSAEAFEQHM 438
V +E + R AE + G T K D + V + D+ ++ +A+++
Sbjct: 508 VSRIEDMDRVMAEAVAANKAGHTVVIDCKITQDRPIPVETLKLDSKLYSEDEIKAYKERY 567
Query: 439 EAVGGLSHPNLVPIRAYFQAKG 460
EA NLVP R Y +A+G
Sbjct: 568 EAA------NLVPFREYLEAEG 583
>pdb|1V5F|A Chain A, Crystal Structure Of Pyruvate Oxidase Complexed With Fad
And Tpp, From Aerococcus Viridans
pdb|1V5G|A Chain A, Crystal Structure Of The Reaction Intermediate Between
Pyruvate Oxidase Containing Fad And Tpp, And Substrate
Pyruvate
Length = 589
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Query: 383 VYSLEQLMRASAELLGRGSIGTTY----KAVLDNHLIVTVKRFDANKTADTSAEAFEQHM 438
V +E + R AE + G T K D + V + D+ ++ +A+++
Sbjct: 507 VSRIEDMDRVMAEAVAANKAGHTVVIDCKITQDRPIPVETLKLDSKLYSEDEIKAYKERY 566
Query: 439 EAVGGLSHPNLVPIRAYFQAKG 460
EA NLVP R Y +A+G
Sbjct: 567 EAA------NLVPFREYLEAEG 582
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 137 AFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPP 188
+ PL +L LT+LD+S+N LT L L L L L L+ N T+PP
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPP 141
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 137 AFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPP 188
+ PL +L LT+LD+S+N LT L L L L L L+ N T+PP
Sbjct: 91 SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPP 141
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,736,203
Number of Sequences: 62578
Number of extensions: 683352
Number of successful extensions: 3119
Number of sequences better than 100.0: 891
Number of HSP's better than 100.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 590
Number of HSP's that attempted gapping in prelim test: 1906
Number of HSP's gapped (non-prelim): 1047
length of query: 665
length of database: 14,973,337
effective HSP length: 105
effective length of query: 560
effective length of database: 8,402,647
effective search space: 4705482320
effective search space used: 4705482320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)