Query 005999
Match_columns 665
No_of_seqs 521 out of 5039
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 13:16:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005999.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005999hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3omv_A RAF proto-oncogene seri 100.0 4.8E-53 1.6E-57 433.6 23.2 250 395-653 42-301 (307)
2 4aoj_A High affinity nerve gro 100.0 1.4E-52 4.8E-57 435.9 24.8 252 395-653 47-320 (329)
3 4asz_A BDNF/NT-3 growth factor 100.0 3.8E-53 1.3E-57 434.3 19.5 252 395-653 19-290 (299)
4 4gt4_A Tyrosine-protein kinase 100.0 1.7E-52 5.7E-57 431.3 20.3 250 395-650 32-304 (308)
5 3fpq_A Serine/threonine-protei 100.0 3.9E-51 1.3E-55 416.3 20.8 243 395-645 32-282 (290)
6 4b9d_A Serine/threonine-protei 100.0 1.7E-51 5.8E-56 428.0 17.5 244 394-645 29-276 (350)
7 4g3f_A NF-kappa-beta-inducing 100.0 4.6E-51 1.6E-55 422.8 20.0 245 395-655 64-319 (336)
8 4fih_A Serine/threonine-protei 100.0 9.3E-51 3.2E-55 421.8 19.3 239 395-645 80-323 (346)
9 4ase_A Vascular endothelial gr 100.0 4.6E-50 1.6E-54 420.4 20.1 258 394-656 69-351 (353)
10 3hyh_A Carbon catabolite-derep 100.0 1.1E-49 3.7E-54 402.2 20.2 240 395-645 19-262 (275)
11 3hmm_A TGF-beta receptor type- 100.0 1.3E-49 4.4E-54 410.5 21.1 249 395-654 9-299 (303)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.5E-50 1.2E-54 411.2 16.2 241 394-645 37-284 (311)
13 4fie_A Serine/threonine-protei 100.0 1.7E-49 5.7E-54 422.4 20.0 239 395-645 157-400 (423)
14 3ubd_A Ribosomal protein S6 ki 100.0 1E-49 3.4E-54 407.9 15.5 241 394-645 29-281 (304)
15 4g31_A Eukaryotic translation 100.0 2E-47 6.9E-52 392.4 19.3 240 394-645 10-279 (299)
16 4b99_A Mitogen-activated prote 100.0 6.2E-46 2.1E-50 395.8 22.2 243 394-645 59-344 (398)
17 4f9c_A Cell division cycle 7-r 100.0 9.4E-45 3.2E-49 382.6 22.4 239 394-645 26-352 (361)
18 3v5w_A G-protein coupled recep 100.0 1.9E-44 6.4E-49 400.3 20.4 244 394-645 194-449 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 6.4E-44 2.2E-48 398.7 17.9 242 394-645 162-410 (573)
20 3p86_A Serine/threonine-protei 100.0 1.3E-42 4.5E-47 360.4 23.1 257 394-656 42-302 (309)
21 2psq_A Fibroblast growth facto 100.0 5.5E-42 1.9E-46 364.8 26.1 257 394-656 86-368 (370)
22 3s95_A LIMK-1, LIM domain kina 100.0 2.6E-42 8.9E-47 358.4 21.9 249 395-656 16-286 (310)
23 3fe3_A MAP/microtubule affinit 100.0 4.4E-42 1.5E-46 359.2 21.1 242 395-646 21-265 (328)
24 4hcu_A Tyrosine-protein kinase 100.0 1.2E-41 4.1E-46 345.8 23.6 247 395-653 16-267 (269)
25 2qkw_B Protein kinase; three-h 100.0 9.4E-42 3.2E-46 356.0 22.8 254 395-653 45-316 (321)
26 3kul_A Ephrin type-A receptor 100.0 1.2E-41 4.2E-46 355.7 22.8 253 394-656 54-317 (325)
27 3fxz_A Serine/threonine-protei 100.0 1.2E-41 3.9E-46 351.3 21.0 240 395-645 26-269 (297)
28 3lb7_A RAF proto-oncogene seri 100.0 4.1E-41 1.4E-45 348.9 23.7 251 395-654 42-302 (307)
29 3soc_A Activin receptor type-2 100.0 1.5E-41 5.1E-46 354.7 20.3 249 395-654 30-320 (322)
30 3gen_A Tyrosine-protein kinase 100.0 5.3E-41 1.8E-45 343.6 24.0 247 395-653 30-281 (283)
31 3uim_A Brassinosteroid insensi 100.0 1E-41 3.6E-46 356.4 18.9 264 382-649 18-308 (326)
32 2c30_A Serine/threonine-protei 100.0 1.1E-40 3.8E-45 347.9 26.5 240 395-646 51-295 (321)
33 4f0f_A Serine/threonine-protei 100.0 4.2E-41 1.4E-45 345.2 22.8 250 395-650 25-287 (287)
34 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.7E-41 5.9E-46 344.4 19.7 247 395-653 14-265 (268)
35 3niz_A Rhodanese family protei 100.0 7.1E-41 2.4E-45 347.8 24.0 244 395-645 27-300 (311)
36 3zgw_A Maternal embryonic leuc 100.0 2.2E-41 7.6E-46 356.0 19.7 241 395-646 16-261 (347)
37 1k9a_A Carboxyl-terminal SRC k 100.0 7.5E-41 2.6E-45 365.4 24.4 246 395-653 199-446 (450)
38 3cbl_A C-FES, proto-oncogene t 100.0 1.7E-41 5.8E-46 362.1 18.5 250 394-653 119-375 (377)
39 3kmu_A ILK, integrin-linked ki 100.0 5.2E-41 1.8E-45 341.0 21.2 250 395-652 16-270 (271)
40 2yab_A Death-associated protei 100.0 9E-41 3.1E-45 353.5 23.7 242 395-645 18-272 (361)
41 3tt0_A Basic fibroblast growth 100.0 1.1E-40 3.9E-45 356.5 24.6 259 395-659 75-359 (382)
42 2qol_A Ephrin receptor; recept 100.0 3.6E-41 1.2E-45 358.8 20.0 250 395-654 51-311 (373)
43 2bdw_A Hypothetical protein K1 100.0 4.9E-41 1.7E-45 356.3 20.7 244 394-646 34-285 (362)
44 3soa_A Calcium/calmodulin-depe 100.0 1E-40 3.6E-45 362.3 23.4 243 394-645 16-267 (444)
45 2nru_A Interleukin-1 receptor- 100.0 2.9E-40 9.8E-45 342.4 25.7 265 382-652 13-306 (307)
46 1csn_A Casein kinase-1; phosph 100.0 1.7E-40 5.7E-45 342.4 23.2 257 395-662 16-293 (298)
47 3ugc_A Tyrosine-protein kinase 100.0 8.5E-41 2.9E-45 344.3 20.4 252 395-654 16-293 (295)
48 2izr_A Casein kinase I isoform 100.0 1.9E-40 6.5E-45 347.6 23.3 253 395-659 15-288 (330)
49 2ivs_A Proto-oncogene tyrosine 100.0 1.8E-40 6.3E-45 344.8 22.9 254 394-653 28-312 (314)
50 1ob3_A PFPK5, cell division co 100.0 9.6E-41 3.3E-45 342.8 20.5 244 395-645 8-280 (288)
51 3tki_A Serine/threonine-protei 100.0 4.4E-41 1.5E-45 351.2 18.2 244 395-646 13-262 (323)
52 1luf_A Muscle-specific tyrosin 100.0 1.1E-40 3.7E-45 351.1 21.3 255 395-655 53-338 (343)
53 1fot_A TPK1 delta, CAMP-depend 100.0 1.6E-40 5.4E-45 345.9 22.2 240 395-645 12-258 (318)
54 1tki_A Titin; serine kinase, m 100.0 9.3E-41 3.2E-45 348.3 20.5 241 395-646 11-258 (321)
55 3qup_A Tyrosine-protein kinase 100.0 1.2E-40 4E-45 348.0 21.3 257 394-655 28-301 (323)
56 2y0a_A Death-associated protei 100.0 8.4E-41 2.9E-45 349.6 20.1 243 394-645 16-271 (326)
57 3t9t_A Tyrosine-protein kinase 100.0 2.2E-40 7.6E-45 335.9 22.6 247 395-653 14-265 (267)
58 4eqm_A Protein kinase; transfe 100.0 1.4E-40 4.8E-45 342.7 21.4 250 395-655 17-278 (294)
59 3vhe_A Vascular endothelial gr 100.0 5.8E-41 2E-45 355.6 18.9 255 395-654 28-357 (359)
60 1o6l_A RAC-beta serine/threoni 100.0 1.6E-40 5.4E-45 348.4 21.9 241 395-646 11-261 (337)
61 3op5_A Serine/threonine-protei 100.0 6.9E-41 2.3E-45 355.9 19.4 260 395-662 41-339 (364)
62 3l9p_A Anaplastic lymphoma kin 100.0 6.7E-41 2.3E-45 356.1 19.2 255 395-655 77-348 (367)
63 1qcf_A Haematopoetic cell kina 100.0 7.6E-41 2.6E-45 365.9 20.2 248 395-654 194-446 (454)
64 1t46_A HOMO sapiens V-KIT hard 100.0 2E-40 6.8E-45 344.4 22.3 257 394-655 28-310 (313)
65 3o0g_A Cell division protein k 100.0 1.8E-40 6.1E-45 341.5 21.6 245 395-645 8-282 (292)
66 2eva_A TAK1 kinase - TAB1 chim 100.0 1.5E-40 5E-45 344.8 21.1 250 395-656 14-267 (307)
67 3q4u_A Activin receptor type-1 100.0 2E-40 6.8E-45 342.4 22.0 243 395-650 14-300 (301)
68 2wqm_A Serine/threonine-protei 100.0 2.8E-40 9.7E-45 343.0 23.2 260 395-657 38-302 (310)
69 3poz_A Epidermal growth factor 100.0 1.4E-40 4.7E-45 348.2 20.8 248 395-653 21-279 (327)
70 1mp8_A Focal adhesion kinase 1 100.0 2.4E-40 8.2E-45 338.6 22.1 250 394-654 20-278 (281)
71 3dtc_A Mitogen-activated prote 100.0 1E-40 3.6E-45 339.1 19.0 246 395-650 13-271 (271)
72 2zv2_A Calcium/calmodulin-depe 100.0 1.4E-40 4.9E-45 343.2 19.9 242 395-645 19-292 (298)
73 1xbb_A Tyrosine-protein kinase 100.0 2.7E-40 9.3E-45 339.9 21.7 251 396-657 24-284 (291)
74 3c0i_A Peripheral plasma membr 100.0 1.5E-40 5E-45 351.4 20.1 246 394-645 29-286 (351)
75 3og7_A AKAP9-BRAF fusion prote 100.0 1.4E-40 4.6E-45 341.9 19.3 249 395-652 30-288 (289)
76 3uc3_A Serine/threonine-protei 100.0 1.5E-40 5.3E-45 352.4 19.9 242 395-646 26-275 (361)
77 1opk_A P150, C-ABL, proto-onco 100.0 7.7E-41 2.6E-45 369.5 18.1 248 395-653 226-479 (495)
78 3p1a_A MYT1 kinase, membrane-a 100.0 3.1E-40 1.1E-44 343.0 21.5 239 394-645 62-304 (311)
79 4euu_A Serine/threonine-protei 100.0 6.4E-40 2.2E-44 341.9 23.9 252 395-650 15-307 (319)
80 2x4f_A Myosin light chain kina 100.0 1.7E-40 5.8E-45 353.5 19.3 241 395-645 95-342 (373)
81 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.8E-40 9.6E-45 348.5 20.8 241 394-645 46-293 (350)
82 1u59_A Tyrosine-protein kinase 100.0 8.6E-40 2.9E-44 335.5 23.7 251 395-656 16-276 (287)
83 4fr4_A YANK1, serine/threonine 100.0 3.7E-40 1.3E-44 351.0 21.5 243 395-645 21-271 (384)
84 2ozo_A Tyrosine-protein kinase 100.0 7.7E-40 2.6E-44 370.1 25.3 251 396-657 343-603 (613)
85 3kfa_A Tyrosine-protein kinase 100.0 2.1E-40 7.1E-45 340.1 18.7 251 395-656 19-275 (288)
86 3brb_A Proto-oncogene tyrosine 100.0 1E-39 3.6E-44 339.2 24.2 256 394-654 39-310 (313)
87 3c1x_A Hepatocyte growth facto 100.0 3.1E-40 1.1E-44 351.3 20.5 255 395-659 95-362 (373)
88 4fl3_A Tyrosine-protein kinase 100.0 3.5E-40 1.2E-44 373.8 22.1 249 395-654 375-633 (635)
89 2pmi_A Negative RE, cyclin-dep 100.0 4.9E-40 1.7E-44 342.4 21.1 247 394-645 10-293 (317)
90 1u5q_A Serine/threonine protei 100.0 5.2E-40 1.8E-44 346.5 21.2 244 394-646 59-306 (348)
91 3gni_B Strad alpha; kinase fol 100.0 9.6E-40 3.3E-44 350.3 23.4 247 395-646 31-334 (389)
92 3qd2_B Eukaryotic translation 100.0 7.2E-40 2.5E-44 342.9 21.9 242 394-645 11-325 (332)
93 3pls_A Macrophage-stimulating 100.0 2E-39 6.9E-44 334.3 24.8 255 394-657 26-292 (298)
94 2pvf_A Fibroblast growth facto 100.0 9.1E-40 3.1E-44 343.0 22.5 259 394-658 40-324 (334)
95 4agu_A Cyclin-dependent kinase 100.0 1.1E-39 3.7E-44 338.7 22.8 243 395-645 9-284 (311)
96 1rjb_A FL cytokine receptor; k 100.0 3.9E-40 1.3E-44 347.2 19.6 258 394-656 50-338 (344)
97 4fvq_A Tyrosine-protein kinase 100.0 1E-40 3.5E-45 342.6 14.6 250 395-656 14-279 (289)
98 3a8x_A Protein kinase C IOTA t 100.0 9.1E-40 3.1E-44 344.1 22.2 237 395-640 15-264 (345)
99 1mqb_A Ephrin type-A receptor 100.0 1.7E-39 5.7E-44 340.8 24.1 251 395-655 50-312 (333)
100 3f66_A Hepatocyte growth facto 100.0 1.3E-39 4.3E-44 336.1 22.7 253 395-657 31-296 (298)
101 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.8E-40 6.1E-45 362.6 17.2 248 395-654 190-442 (452)
102 3mdy_A Bone morphogenetic prot 100.0 2.8E-39 9.4E-44 339.4 25.4 247 394-654 42-333 (337)
103 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.8E-40 6.1E-45 350.3 16.3 240 395-645 29-280 (353)
104 1qpc_A LCK kinase; alpha beta 100.0 7.8E-40 2.7E-44 334.3 20.2 249 395-655 19-272 (279)
105 4dc2_A Protein kinase C IOTA t 100.0 6.6E-40 2.3E-44 350.2 20.5 237 395-640 58-307 (396)
106 1kob_A Twitchin; kinase, intra 100.0 4.4E-40 1.5E-44 351.4 19.2 243 394-646 56-305 (387)
107 3kk8_A Calcium/calmodulin depe 100.0 5.7E-40 2E-44 336.1 19.3 243 395-646 12-262 (284)
108 3lxp_A Non-receptor tyrosine-p 100.0 6.2E-40 2.1E-44 341.8 19.5 254 395-657 37-315 (318)
109 4e5w_A Tyrosine-protein kinase 100.0 5E-40 1.7E-44 339.6 18.6 251 395-652 27-302 (302)
110 3dbq_A Dual specificity protei 100.0 5.3E-40 1.8E-44 346.1 19.1 243 395-646 15-274 (343)
111 3kex_A Receptor tyrosine-prote 100.0 3.1E-40 1E-44 345.2 17.0 249 395-654 19-278 (325)
112 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.2E-40 1.1E-44 345.8 17.1 241 395-646 15-259 (336)
113 2v62_A Serine/threonine-protei 100.0 2.1E-40 7.2E-45 349.5 15.8 256 395-658 43-334 (345)
114 2w4o_A Calcium/calmodulin-depe 100.0 7.6E-40 2.6E-44 345.5 19.5 239 395-645 59-305 (349)
115 2i0e_A Protein kinase C-beta I 100.0 1.7E-39 5.7E-44 342.7 22.1 240 395-645 26-276 (353)
116 1byg_A CSK, protein (C-termina 100.0 6.1E-40 2.1E-44 335.0 18.1 246 395-653 27-274 (278)
117 4hgt_A Casein kinase I isoform 100.0 3.4E-39 1.2E-43 332.1 23.8 256 394-660 14-288 (296)
118 2zmd_A Dual specificity protei 100.0 1.1E-39 3.6E-44 349.6 20.7 243 395-646 62-321 (390)
119 2jii_A Serine/threonine-protei 100.0 4.3E-40 1.5E-44 348.1 17.3 255 395-662 48-346 (352)
120 2eue_A Carbon catabolite derep 100.0 1.3E-39 4.6E-44 331.8 20.3 240 395-645 19-262 (275)
121 2y94_A 5'-AMP-activated protei 100.0 1.6E-39 5.3E-44 355.4 22.2 241 395-645 22-266 (476)
122 3a62_A Ribosomal protein S6 ki 100.0 1.7E-39 5.9E-44 339.8 21.2 240 395-645 23-276 (327)
123 3cc6_A Protein tyrosine kinase 100.0 2.4E-39 8.4E-44 331.0 21.8 249 395-654 18-275 (281)
124 3uzp_A CKI-delta, CKID, casein 100.0 5.7E-39 1.9E-43 330.6 24.6 254 395-659 15-287 (296)
125 3llt_A Serine/threonine kinase 100.0 3.1E-39 1.1E-43 342.6 23.2 240 395-645 41-355 (360)
126 2a2a_A Death-associated protei 100.0 2.8E-39 9.6E-44 337.3 22.4 243 394-645 17-272 (321)
127 1t4h_A Serine/threonine-protei 100.0 2.1E-39 7.1E-44 333.1 21.1 243 395-645 32-282 (290)
128 2yex_A Serine/threonine-protei 100.0 2.9E-39 1E-43 329.3 22.0 244 394-645 12-261 (276)
129 3lzb_A Epidermal growth factor 100.0 1.2E-39 3.9E-44 341.1 19.4 248 395-653 21-279 (327)
130 1xjd_A Protein kinase C, theta 100.0 4.6E-40 1.6E-44 345.9 16.2 239 395-644 23-268 (345)
131 3ork_A Serine/threonine protei 100.0 3.2E-40 1.1E-44 342.9 14.8 250 395-653 18-282 (311)
132 2ac3_A MAP kinase-interacting 100.0 2.1E-39 7E-44 337.4 20.7 243 395-645 19-295 (316)
133 3f3z_A Calcium/calmodulin-depe 100.0 2.9E-39 1E-43 329.7 21.3 240 394-645 14-261 (277)
134 3bhy_A Death-associated protei 100.0 4.6E-39 1.6E-43 329.1 22.9 255 394-657 10-279 (283)
135 3dls_A PAS domain-containing s 100.0 8.3E-40 2.8E-44 343.3 17.7 237 394-646 29-275 (335)
136 1fvr_A Tyrosine-protein kinase 100.0 2.8E-39 9.7E-44 338.2 21.7 256 395-656 31-304 (327)
137 2xir_A Vascular endothelial gr 100.0 2.1E-39 7.2E-44 337.1 20.5 257 394-655 32-313 (316)
138 2i1m_A Macrophage colony-stimu 100.0 4.9E-40 1.7E-44 344.8 15.8 258 395-657 52-331 (333)
139 3kn6_A Ribosomal protein S6 ki 100.0 1E-39 3.5E-44 341.1 18.1 239 395-645 17-270 (325)
140 1x8b_A WEE1HU, WEE1-like prote 100.0 2.4E-39 8.3E-44 331.6 20.6 243 394-645 16-279 (289)
141 1nxk_A MAP kinase-activated pr 100.0 3.2E-39 1.1E-43 346.9 22.3 240 395-646 68-322 (400)
142 1cm8_A Phosphorylated MAP kina 100.0 3E-39 1E-43 343.3 21.8 242 395-645 31-307 (367)
143 3fdn_A Serine/threonine-protei 100.0 2.4E-39 8.1E-44 330.8 19.6 241 395-646 15-258 (279)
144 2h8h_A Proto-oncogene tyrosine 100.0 6.7E-40 2.3E-44 365.3 16.9 249 395-655 273-526 (535)
145 2acx_A G protein-coupled recep 100.0 2E-39 6.8E-44 359.5 20.4 244 395-645 190-444 (576)
146 2h34_A Serine/threonine-protei 100.0 1.7E-39 5.9E-44 337.0 18.6 253 395-656 40-300 (309)
147 4aw2_A Serine/threonine-protei 100.0 8.5E-40 2.9E-44 353.9 16.9 245 394-645 79-338 (437)
148 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.4E-39 4.8E-44 340.8 17.9 243 395-645 40-318 (329)
149 3is5_A Calcium-dependent prote 100.0 2.1E-39 7.3E-44 332.3 18.8 245 394-645 27-278 (285)
150 3oz6_A Mitogen-activated prote 100.0 2E-39 6.9E-44 347.6 19.4 242 395-646 15-329 (388)
151 3lxl_A Tyrosine-protein kinase 100.0 2.2E-39 7.5E-44 339.0 19.0 255 395-657 29-308 (327)
152 2buj_A Serine/threonine-protei 100.0 1.2E-39 4.1E-44 339.3 16.8 254 395-653 35-307 (317)
153 3v8s_A RHO-associated protein 100.0 4.3E-40 1.5E-44 353.6 13.6 243 395-646 75-330 (410)
154 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.4E-39 1.5E-43 355.9 21.8 246 395-645 191-448 (543)
155 3lm5_A Serine/threonine-protei 100.0 1.2E-39 4E-44 341.1 16.3 245 395-646 35-288 (327)
156 2r5t_A Serine/threonine-protei 100.0 1.7E-39 6E-44 345.0 17.9 238 395-643 44-287 (373)
157 3hko_A Calcium/calmodulin-depe 100.0 9E-40 3.1E-44 344.5 15.5 249 394-645 31-330 (345)
158 4aaa_A Cyclin-dependent kinase 100.0 3.4E-39 1.2E-43 338.2 19.6 244 395-645 31-306 (331)
159 3fme_A Dual specificity mitoge 100.0 2.1E-39 7.3E-44 332.8 17.6 247 395-645 13-266 (290)
160 4ejn_A RAC-alpha serine/threon 100.0 2.1E-39 7E-44 354.0 18.1 241 394-645 153-404 (446)
161 3rp9_A Mitogen-activated prote 100.0 5.2E-39 1.8E-43 352.2 21.3 245 394-645 58-396 (458)
162 4eut_A Serine/threonine-protei 100.0 3.8E-39 1.3E-43 346.3 19.8 256 395-654 15-311 (396)
163 3lij_A Calcium/calmodulin depe 100.0 7.1E-39 2.4E-43 354.3 22.4 247 394-650 42-298 (494)
164 3cok_A Serine/threonine-protei 100.0 3.5E-39 1.2E-43 329.2 18.4 241 395-645 17-262 (278)
165 1p4o_A Insulin-like growth fac 100.0 3E-39 1E-43 337.1 18.3 253 395-653 31-300 (322)
166 2w1i_A JAK2; chromosomal rearr 100.0 6.7E-39 2.3E-43 335.2 20.9 252 394-654 46-324 (326)
167 2a19_B Interferon-induced, dou 100.0 5E-39 1.7E-43 328.8 19.4 244 394-656 16-278 (284)
168 3n9x_A Phosphotransferase; mal 100.0 1E-38 3.5E-43 346.8 22.8 244 395-645 32-361 (432)
169 1b6c_B TGF-B superfamily recep 100.0 2.3E-38 7.9E-43 333.2 24.7 249 394-655 47-339 (342)
170 3byv_A Rhoptry kinase; malaria 100.0 2.9E-40 9.8E-45 352.8 10.2 247 395-653 79-369 (377)
171 3mwu_A Calmodulin-domain prote 100.0 3.6E-39 1.2E-43 355.9 19.3 243 394-646 27-277 (486)
172 2vd5_A DMPK protein; serine/th 100.0 1.5E-39 5.3E-44 349.4 15.9 243 395-645 67-327 (412)
173 3mi9_A Cell division protein k 100.0 7.9E-39 2.7E-43 338.2 20.9 243 395-645 23-311 (351)
174 3e7e_A HBUB1, BUB1A, mitotic c 100.0 5.5E-39 1.9E-43 341.3 19.5 246 395-655 71-342 (365)
175 3eqc_A Dual specificity mitoge 100.0 3.4E-39 1.2E-43 342.2 17.9 244 395-646 39-325 (360)
176 2rku_A Serine/threonine-protei 100.0 9.8E-39 3.4E-43 328.8 20.8 241 395-646 21-266 (294)
177 2qr7_A Ribosomal protein S6 ki 100.0 4.6E-39 1.6E-43 338.3 18.2 240 394-646 27-278 (342)
178 2yfx_A Tyrosine-protein kinase 100.0 7.6E-39 2.6E-43 334.9 19.8 254 395-654 36-306 (327)
179 2y4i_B KSR2, HKSR2, kinase sup 100.0 8.1E-40 2.8E-44 340.8 12.3 252 395-656 39-306 (319)
180 2vgo_A Serine/threonine-protei 100.0 1E-38 3.5E-43 326.9 20.3 240 395-645 20-262 (284)
181 1vzo_A Ribosomal protein S6 ki 100.0 1.7E-39 5.7E-44 343.9 14.7 246 394-646 59-322 (355)
182 2jam_A Calcium/calmodulin-depe 100.0 1E-38 3.4E-43 330.4 20.0 241 394-645 14-261 (304)
183 1u46_A ACK-1, activated CDC42 100.0 2.9E-39 1E-43 331.9 15.9 251 395-654 24-286 (291)
184 2h6d_A 5'-AMP-activated protei 100.0 1E-38 3.5E-43 325.3 19.7 242 395-646 17-262 (276)
185 2owb_A Serine/threonine-protei 100.0 1E-38 3.4E-43 335.2 20.1 241 395-646 47-292 (335)
186 2y7j_A Phosphorylase B kinase 100.0 2.2E-38 7.4E-43 336.5 22.8 243 395-645 100-359 (365)
187 3g33_A Cell division protein k 100.0 8.9E-39 3E-43 331.4 19.4 243 395-645 15-296 (308)
188 3ttj_A Mitogen-activated prote 100.0 1E-38 3.5E-43 349.2 20.8 241 395-646 68-356 (464)
189 2fst_X Mitogen-activated prote 100.0 4.9E-39 1.7E-43 341.4 17.7 242 395-646 35-312 (367)
190 3g2f_A Bone morphogenetic prot 100.0 7.7E-39 2.6E-43 336.0 18.6 251 395-656 19-322 (336)
191 3mtl_A Cell division protein k 100.0 3.8E-39 1.3E-43 336.7 16.1 242 395-645 8-281 (324)
192 3i6u_A CDS1, serine/threonine- 100.0 9.2E-39 3.1E-43 345.6 19.5 244 394-645 140-399 (419)
193 3sv0_A Casein kinase I-like; t 100.0 4.4E-38 1.5E-42 344.6 25.1 251 395-656 13-282 (483)
194 3nyv_A Calmodulin-domain prote 100.0 5.3E-39 1.8E-43 354.6 18.0 242 394-645 31-281 (484)
195 2clq_A Mitogen-activated prote 100.0 1.6E-38 5.5E-43 327.1 20.4 245 395-645 28-278 (295)
196 3q5i_A Protein kinase; CDPK, m 100.0 1.8E-38 6E-43 352.0 22.2 241 395-645 42-301 (504)
197 3a7i_A MST3 kinase, serine/thr 100.0 2.1E-38 7.3E-43 327.7 21.3 241 395-647 28-272 (303)
198 2r3i_A Cell division protein k 100.0 2.5E-38 8.7E-43 326.4 21.7 245 395-645 9-283 (299)
199 2w5a_A Serine/threonine-protei 100.0 4.1E-39 1.4E-43 328.8 15.6 249 395-648 12-270 (279)
200 3gxj_A TGF-beta receptor type- 100.0 2.2E-40 7.6E-45 342.2 6.2 247 395-654 9-299 (303)
201 4exu_A Mitogen-activated prote 100.0 2E-38 7E-43 337.6 21.1 241 395-646 48-324 (371)
202 1ua2_A CAK, cell division prot 100.0 1.4E-38 4.9E-43 335.5 19.3 246 394-646 15-292 (346)
203 3an0_A Dual specificity mitoge 100.0 5.1E-39 1.7E-43 338.1 15.8 246 395-645 57-310 (340)
204 3kvw_A DYRK2, dual specificity 100.0 2.7E-38 9.3E-43 342.9 21.8 242 394-645 102-408 (429)
205 3ll6_A Cyclin G-associated kin 100.0 1.4E-38 4.6E-43 333.9 18.6 251 394-655 33-311 (337)
206 3q60_A ROP5B; pseudokinase, tr 100.0 2.4E-39 8.1E-44 344.9 12.7 252 394-652 67-361 (371)
207 3com_A Serine/threonine-protei 100.0 4.1E-38 1.4E-42 327.3 21.4 240 394-645 34-278 (314)
208 1z57_A Dual specificity protei 100.0 5.9E-38 2E-42 329.2 22.0 241 395-646 20-329 (339)
209 1phk_A Phosphorylase kinase; g 100.0 2.4E-38 8.1E-43 326.4 18.5 243 395-645 23-283 (298)
210 2xrw_A Mitogen-activated prote 100.0 6.6E-38 2.2E-42 333.7 22.4 240 395-646 31-319 (371)
211 3nsz_A CK II alpha, casein kin 100.0 6.3E-38 2.2E-42 328.2 21.6 237 395-645 42-319 (330)
212 2ycf_A Serine/threonine-protei 100.0 2.7E-38 9.3E-43 330.0 18.6 244 394-645 15-274 (322)
213 2vwi_A Serine/threonine-protei 100.0 1.6E-38 5.6E-43 328.2 16.5 247 395-645 21-287 (303)
214 3rgf_A Cyclin-dependent kinase 100.0 1E-38 3.4E-43 344.2 15.5 246 394-645 26-333 (405)
215 2wei_A Calmodulin-domain prote 100.0 5.9E-38 2E-42 321.8 20.5 242 394-645 27-276 (287)
216 2j7t_A Serine/threonine-protei 100.0 2E-38 6.8E-43 327.6 17.0 242 395-645 25-275 (302)
217 2x7f_A TRAF2 and NCK-interacti 100.0 3.7E-38 1.3E-42 329.4 19.3 242 395-645 30-286 (326)
218 3qyz_A Mitogen-activated prote 100.0 7E-38 2.4E-42 332.7 21.4 240 395-645 33-313 (364)
219 1wak_A Serine/threonine-protei 100.0 4.5E-38 1.5E-42 337.9 19.8 243 394-645 42-391 (397)
220 2j0j_A Focal adhesion kinase 1 100.0 8.1E-38 2.8E-42 355.8 22.8 250 394-654 395-653 (656)
221 2pml_X PFPK7, Ser/Thr protein 100.0 1.8E-38 6.1E-43 335.0 15.7 245 395-645 37-322 (348)
222 3pfq_A PKC-B, PKC-beta, protei 100.0 4.7E-38 1.6E-42 358.8 20.2 241 394-645 346-597 (674)
223 3coi_A Mitogen-activated prote 100.0 5.9E-38 2E-42 331.8 19.3 240 395-645 30-305 (353)
224 2dyl_A Dual specificity mitoge 100.0 6.8E-38 2.3E-42 326.0 19.2 244 395-645 31-283 (318)
225 3cek_A Dual specificity protei 100.0 7.4E-38 2.5E-42 325.3 19.0 243 395-646 34-293 (313)
226 3pg1_A Mitogen-activated prote 100.0 6.5E-38 2.2E-42 332.6 18.1 243 395-645 28-316 (362)
227 3eb0_A Putative uncharacterize 100.0 6.9E-38 2.4E-42 335.1 18.3 248 395-652 13-330 (383)
228 4e7w_A Glycogen synthase kinas 100.0 1.1E-37 3.7E-42 334.6 19.9 242 395-646 46-322 (394)
229 1zy4_A Serine/threonine-protei 100.0 8.4E-38 2.9E-42 322.6 18.0 240 394-645 11-283 (303)
230 2wtk_C Serine/threonine-protei 100.0 2.3E-37 7.8E-42 320.1 21.2 243 395-646 11-264 (305)
231 3aln_A Dual specificity mitoge 100.0 4.1E-38 1.4E-42 329.3 15.3 244 395-645 28-285 (327)
232 1blx_A Cyclin-dependent kinase 100.0 1.5E-37 5.2E-42 324.6 18.8 243 395-645 17-296 (326)
233 1j1b_A Glycogen synthase kinas 100.0 1.7E-37 5.8E-42 335.8 19.8 242 394-645 59-336 (420)
234 2i6l_A Mitogen-activated prote 100.0 3.4E-37 1.1E-41 320.8 20.8 239 395-645 17-305 (320)
235 2b9h_A MAP kinase FUS3, mitoge 100.0 2.8E-37 9.7E-42 326.4 20.4 242 395-645 17-305 (353)
236 1q8y_A SR protein kinase; tran 100.0 1.8E-37 6.2E-42 330.4 18.9 242 395-645 25-333 (373)
237 2eu9_A Dual specificity protei 100.0 3.3E-37 1.1E-41 325.8 20.6 240 395-645 25-333 (355)
238 2vx3_A Dual specificity tyrosi 100.0 4.9E-37 1.7E-41 328.3 21.1 190 395-593 60-260 (382)
239 3e3p_A Protein kinase, putativ 100.0 3.3E-37 1.1E-41 326.8 19.4 245 395-646 29-315 (360)
240 3fhr_A MAP kinase-activated pr 100.0 1.9E-37 6.5E-42 325.5 17.3 240 395-645 35-287 (336)
241 3a99_A Proto-oncogene serine/t 100.0 7.4E-38 2.5E-42 326.4 13.1 235 395-645 49-293 (320)
242 2iwi_A Serine/threonine-protei 100.0 1.2E-37 4E-42 323.6 12.9 236 394-645 36-283 (312)
243 2rio_A Serine/threonine-protei 100.0 2.7E-37 9.1E-42 335.7 14.6 241 395-645 21-295 (434)
244 3p23_A Serine/threonine-protei 100.0 2.1E-36 7E-41 328.0 18.5 237 395-645 30-283 (432)
245 3uqc_A Probable conserved tran 100.0 3.9E-36 1.3E-40 308.0 17.4 226 395-655 37-268 (286)
246 2pzi_A Probable serine/threoni 100.0 1E-35 3.4E-40 341.5 19.5 237 395-654 86-330 (681)
247 3qa8_A MGC80376 protein; kinas 100.0 3.9E-36 1.3E-40 336.3 12.8 251 394-653 19-310 (676)
248 3m2w_A MAP kinase-activated pr 100.0 3.8E-35 1.3E-39 302.8 15.9 221 395-646 24-257 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 1.1E-35 3.7E-40 321.0 11.8 240 395-645 84-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 4.4E-35 1.5E-39 307.6 4.0 236 391-644 22-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 1.4E-29 4.8E-34 282.8 4.6 183 397-590 242-437 (569)
252 1ogq_A PGIP-2, polygalacturona 100.0 4E-28 1.4E-32 251.8 14.9 194 31-226 2-208 (313)
253 3rgz_A Protein brassinosteroid 99.9 4.5E-26 1.5E-30 265.1 13.2 195 31-226 8-234 (768)
254 3en9_A Glycoprotease, O-sialog 99.9 6.8E-26 2.3E-30 251.6 6.1 182 394-592 341-539 (540)
255 4eco_A Uncharacterized protein 99.9 6.8E-25 2.3E-29 249.6 10.4 193 32-226 27-341 (636)
256 4ecn_A Leucine-rich repeat pro 99.9 9.2E-25 3.2E-29 253.5 9.0 192 31-227 265-585 (876)
257 4fcg_A Uncharacterized protein 99.9 2.1E-24 7.3E-29 225.1 9.9 199 27-228 19-242 (328)
258 3rgz_A Protein brassinosteroid 99.9 1.5E-22 5.1E-27 235.5 13.4 165 74-240 514-751 (768)
259 3m19_A Variable lymphocyte rec 99.9 5.3E-22 1.8E-26 198.8 14.9 155 75-230 36-194 (251)
260 3e6j_A Variable lymphocyte rec 99.9 6.2E-21 2.1E-25 188.2 15.7 159 59-231 14-175 (229)
261 2o6q_A Variable lymphocyte rec 99.9 6.1E-21 2.1E-25 193.3 16.1 150 75-225 38-191 (270)
262 1zar_A RIO2 kinase; serine kin 99.8 4.9E-22 1.7E-26 202.3 6.6 141 395-563 96-252 (282)
263 1ogq_A PGIP-2, polygalacturona 99.8 2.7E-21 9.2E-26 200.3 11.2 161 74-237 125-312 (313)
264 2v9t_B SLIT homolog 2 protein 99.8 2.7E-20 9.3E-25 182.4 13.8 152 79-234 16-171 (220)
265 2v70_A SLIT-2, SLIT homolog 2 99.8 1.5E-20 5.1E-25 184.3 9.9 152 78-233 15-171 (220)
266 2v70_A SLIT-2, SLIT homolog 2 99.8 7.8E-20 2.7E-24 179.1 14.4 147 63-209 10-170 (220)
267 2o6s_A Variable lymphocyte rec 99.8 9.7E-20 3.3E-24 176.8 14.2 147 62-209 5-165 (208)
268 1p9a_G Platelet glycoprotein I 99.8 2.5E-19 8.4E-24 183.3 14.7 157 74-233 55-213 (290)
269 2xot_A Amphoterin-induced prot 99.8 6E-20 2E-24 194.2 10.2 169 64-233 18-207 (361)
270 3rfs_A Internalin B, repeat mo 99.8 4.5E-19 1.5E-23 179.7 15.9 157 73-232 62-222 (272)
271 3zyi_A Leucine-rich repeat-con 99.8 4.8E-19 1.6E-23 193.2 14.6 159 75-234 76-309 (452)
272 1ozn_A Reticulon 4 receptor; N 99.8 6.6E-19 2.2E-23 179.7 12.3 159 74-233 80-243 (285)
273 1w8a_A SLIT protein; signaling 99.8 4.6E-19 1.6E-23 169.7 9.7 152 77-232 11-166 (192)
274 1w8a_A SLIT protein; signaling 99.8 6.1E-19 2.1E-23 168.8 9.8 167 63-232 7-187 (192)
275 2z62_A TOLL-like receptor 4, v 99.8 1.8E-18 6.3E-23 175.5 12.7 158 74-232 76-241 (276)
276 1ozn_A Reticulon 4 receptor; N 99.8 4.3E-18 1.5E-22 173.7 14.7 152 74-226 32-188 (285)
277 2v9t_B SLIT homolog 2 protein 99.8 1.2E-18 4.2E-23 170.5 10.0 145 63-208 10-168 (220)
278 2o6s_A Variable lymphocyte rec 99.8 1.3E-17 4.5E-22 161.7 16.2 158 68-232 4-165 (208)
279 2z80_A TOLL-like receptor 2, v 99.7 3.8E-18 1.3E-22 179.8 11.9 164 61-226 27-209 (353)
280 1p9a_G Platelet glycoprotein I 99.7 8E-18 2.7E-22 172.0 14.0 151 74-227 31-184 (290)
281 4fcg_A Uncharacterized protein 99.7 2.8E-18 9.5E-23 178.8 10.7 152 74-228 104-266 (328)
282 2z66_A Variable lymphocyte rec 99.7 3.6E-18 1.2E-22 176.1 11.4 159 74-232 101-265 (306)
283 3zyj_A Leucine-rich repeat-con 99.7 6.5E-18 2.2E-22 183.5 13.8 158 74-234 112-298 (440)
284 3e6j_A Variable lymphocyte rec 99.7 1.3E-17 4.5E-22 164.3 13.4 135 74-210 40-177 (229)
285 1zth_A RIO1 serine protein kin 99.7 3.9E-18 1.3E-22 171.3 9.7 135 395-544 53-220 (258)
286 2o6q_A Variable lymphocyte rec 99.7 2.4E-17 8.2E-22 166.7 15.3 162 61-226 2-168 (270)
287 3vq2_A TLR4, TOLL-like recepto 99.7 4.8E-18 1.7E-22 192.3 11.1 161 74-234 399-564 (606)
288 2z81_A CD282 antigen, TOLL-lik 99.7 7.3E-18 2.5E-22 188.4 11.7 162 63-226 3-183 (549)
289 2xwt_C Thyrotropin receptor; s 99.7 1.7E-17 5.9E-22 164.5 12.4 152 74-228 31-192 (239)
290 3v47_A TOLL-like receptor 5B a 99.7 7.2E-18 2.5E-22 183.9 10.6 134 99-232 275-412 (455)
291 3m19_A Variable lymphocyte rec 99.7 4.9E-17 1.7E-21 162.6 15.4 161 62-227 3-167 (251)
292 3j0a_A TOLL-like receptor 5; m 99.7 6.7E-18 2.3E-22 198.3 10.5 138 95-234 422-566 (844)
293 2z66_A Variable lymphocyte rec 99.7 7.7E-18 2.6E-22 173.6 9.7 162 63-226 6-186 (306)
294 2z62_A TOLL-like receptor 4, v 99.7 1.8E-17 6E-22 168.3 12.0 151 75-226 29-188 (276)
295 3rfs_A Internalin B, repeat mo 99.7 3.6E-17 1.2E-21 165.7 14.0 136 74-210 85-223 (272)
296 3zyj_A Leucine-rich repeat-con 99.7 2.9E-17 1E-21 178.3 14.0 151 74-226 64-218 (440)
297 2o6r_A Variable lymphocyte rec 99.7 4E-17 1.4E-21 154.0 12.6 134 63-210 6-142 (177)
298 3v47_A TOLL-like receptor 5B a 99.7 2.1E-17 7.4E-22 180.1 11.5 165 61-226 5-191 (455)
299 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 4.7E-17 1.6E-21 182.5 14.4 158 73-233 352-515 (562)
300 3oja_B Anopheles plasmodium-re 99.7 3.2E-17 1.1E-21 185.1 12.3 149 75-226 52-203 (597)
301 4ezg_A Putative uncharacterize 99.7 2.5E-17 8.5E-22 158.3 9.7 147 74-226 44-192 (197)
302 4g8a_A TOLL-like receptor 4; l 99.7 4.1E-17 1.4E-21 185.3 13.0 136 74-210 52-191 (635)
303 3t6q_A CD180 antigen; protein- 99.7 2.9E-17 1E-21 185.8 10.4 157 76-233 402-565 (606)
304 2id5_A Lingo-1, leucine rich r 99.7 5.4E-17 1.9E-21 178.1 11.9 160 66-226 13-187 (477)
305 3o6n_A APL1; leucine-rich repe 99.7 6.6E-17 2.2E-21 172.7 11.9 150 74-226 45-197 (390)
306 2z7x_B TOLL-like receptor 1, v 99.7 4.6E-17 1.6E-21 180.7 11.1 157 74-233 324-486 (520)
307 4g8a_A TOLL-like receptor 4; l 99.7 7E-17 2.4E-21 183.4 12.3 161 74-234 420-586 (635)
308 4b8c_D Glucose-repressible alc 99.7 8.5E-18 2.9E-22 193.3 4.3 180 29-210 126-334 (727)
309 3vq2_A TLR4, TOLL-like recepto 99.7 9.5E-17 3.3E-21 181.6 12.9 152 74-226 32-192 (606)
310 2ell_A Acidic leucine-rich nuc 99.7 5.8E-17 2E-21 151.4 9.1 132 74-207 24-162 (168)
311 2z63_A TOLL-like receptor 4, v 99.7 8.4E-17 2.9E-21 180.6 11.8 158 74-233 373-536 (570)
312 3oja_A Leucine-rich immune mol 99.7 3.9E-17 1.3E-21 179.4 8.4 150 74-226 58-225 (487)
313 1ziw_A TOLL-like receptor 3; i 99.7 1.3E-16 4.4E-21 183.2 12.7 158 75-233 455-627 (680)
314 2wfh_A SLIT homolog 2 protein 99.7 2.4E-16 8.2E-21 150.8 12.6 127 78-208 14-142 (193)
315 2wfh_A SLIT homolog 2 protein 99.7 2.2E-16 7.6E-21 151.0 12.3 130 102-234 13-145 (193)
316 3oja_A Leucine-rich immune mol 99.7 3.2E-17 1.1E-21 180.1 7.2 153 74-232 99-254 (487)
317 1wwl_A Monocyte differentiatio 99.7 2.3E-17 7.8E-22 170.6 5.6 153 74-226 95-264 (312)
318 4glp_A Monocyte differentiatio 99.7 7.1E-17 2.4E-21 166.8 9.3 150 74-227 145-306 (310)
319 3t6q_A CD180 antigen; protein- 99.7 1.4E-16 4.8E-21 180.3 11.8 152 74-226 33-190 (606)
320 1wwl_A Monocyte differentiatio 99.7 7E-17 2.4E-21 167.0 8.5 150 73-226 120-285 (312)
321 4eco_A Uncharacterized protein 99.7 5.4E-17 1.8E-21 184.5 8.0 152 74-227 206-389 (636)
322 2je0_A Acidic leucine-rich nuc 99.7 7.9E-17 2.7E-21 147.3 7.3 126 74-201 17-149 (149)
323 1xku_A Decorin; proteoglycan, 99.7 4.8E-16 1.6E-20 162.0 13.9 159 62-226 29-203 (330)
324 2xot_A Amphoterin-induced prot 99.7 4.2E-16 1.4E-20 164.5 13.5 154 67-227 14-175 (361)
325 3cvr_A Invasion plasmid antige 99.7 1.5E-16 5.1E-21 176.6 10.5 148 60-227 39-192 (571)
326 2xwt_C Thyrotropin receptor; s 99.7 2.6E-16 8.8E-21 156.0 10.6 151 74-227 55-217 (239)
327 2ft3_A Biglycan; proteoglycan, 99.6 6.5E-16 2.2E-20 161.1 13.9 158 63-226 32-204 (332)
328 2z80_A TOLL-like receptor 2, v 99.6 1.1E-16 3.7E-21 168.6 7.9 110 74-185 76-189 (353)
329 2z81_A CD282 antigen, TOLL-lik 99.6 1.2E-16 4E-21 178.6 8.3 157 74-232 334-514 (549)
330 3j0a_A TOLL-like receptor 5; m 99.6 3.4E-16 1.2E-20 183.8 12.3 162 64-226 14-185 (844)
331 2id5_A Lingo-1, leucine rich r 99.6 4.1E-16 1.4E-20 171.1 12.1 154 74-228 56-213 (477)
332 1ziw_A TOLL-like receptor 3; i 99.6 2.8E-16 9.7E-21 180.3 10.8 152 74-226 25-182 (680)
333 1xeu_A Internalin C; cellular 99.6 3.9E-16 1.3E-20 157.1 10.0 146 74-229 41-186 (263)
334 4ecn_A Leucine-rich repeat pro 99.6 2.2E-16 7.4E-21 183.4 8.3 150 74-227 448-631 (876)
335 3o53_A Protein LRIM1, AGAP0063 99.6 1.5E-16 5E-21 164.9 5.9 151 73-226 57-225 (317)
336 3o53_A Protein LRIM1, AGAP0063 99.6 2.3E-16 7.9E-21 163.4 7.3 153 74-232 99-254 (317)
337 3oja_B Anopheles plasmodium-re 99.6 1.5E-15 5.1E-20 171.4 13.7 152 74-226 75-289 (597)
338 3o6n_A APL1; leucine-rich repe 99.6 1.2E-15 4E-20 162.9 12.2 152 74-226 93-306 (390)
339 1h6t_A Internalin B; cell adhe 99.6 7.2E-16 2.5E-20 157.6 9.9 146 73-227 67-212 (291)
340 1h6u_A Internalin H; cell adhe 99.6 1.3E-15 4.4E-20 157.1 11.7 146 73-227 62-207 (308)
341 4ezg_A Putative uncharacterize 99.6 1.3E-15 4.3E-20 146.3 10.5 129 74-206 66-195 (197)
342 2z63_A TOLL-like receptor 4, v 99.6 1.1E-15 3.8E-20 171.4 11.7 152 74-226 28-188 (570)
343 1xku_A Decorin; proteoglycan, 99.6 3E-15 1E-19 156.0 13.9 150 74-227 121-275 (330)
344 1h6t_A Internalin B; cell adhe 99.6 1.6E-15 5.6E-20 155.0 10.9 144 74-227 46-190 (291)
345 1h6u_A Internalin H; cell adhe 99.6 1.1E-15 3.6E-20 157.7 9.5 145 74-227 85-229 (308)
346 2ell_A Acidic leucine-rich nuc 99.6 1.2E-15 4.2E-20 142.3 8.3 129 97-227 22-159 (168)
347 2o6r_A Variable lymphocyte rec 99.6 4.7E-15 1.6E-19 139.6 12.3 130 101-232 9-141 (177)
348 4glp_A Monocyte differentiatio 99.6 7.9E-16 2.7E-20 158.9 7.0 153 74-227 91-263 (310)
349 2ft3_A Biglycan; proteoglycan, 99.6 3.4E-15 1.2E-19 155.6 11.5 149 74-226 102-275 (332)
350 1m9s_A Internalin B; cell inva 99.6 2.9E-15 1E-19 168.0 11.4 146 73-227 64-209 (605)
351 4gyi_A RIO2 kinase; protein ki 99.6 1.3E-15 4.4E-20 159.2 7.7 138 394-545 100-267 (397)
352 2z7x_B TOLL-like receptor 1, v 99.6 2.2E-15 7.4E-20 167.2 9.7 131 96-226 321-455 (520)
353 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 5E-15 1.7E-19 166.0 12.8 131 96-226 350-484 (562)
354 4ay9_X Follicle-stimulating ho 99.6 5.2E-15 1.8E-19 155.5 11.9 160 64-224 9-186 (350)
355 2je0_A Acidic leucine-rich nuc 99.6 1.6E-15 5.5E-20 138.5 6.7 125 97-223 15-148 (149)
356 3zyi_A Leucine-rich repeat-con 99.6 8.5E-15 2.9E-19 159.5 12.9 135 74-209 147-307 (452)
357 1a9n_A U2A', U2A'; complex (nu 99.6 3.4E-15 1.1E-19 140.6 7.9 128 74-206 19-154 (176)
358 4b8c_D Glucose-repressible alc 99.6 5.4E-16 1.8E-20 178.3 1.8 134 73-210 223-359 (727)
359 1m9s_A Internalin B; cell inva 99.5 5.2E-15 1.8E-19 166.0 9.3 143 74-226 43-186 (605)
360 2r9u_A Variable lymphocyte rec 99.5 2.5E-14 8.5E-19 134.3 11.7 107 77-187 15-122 (174)
361 3g39_A Variable lymphocyte rec 99.5 2.9E-14 1E-18 133.3 11.3 105 78-186 13-118 (170)
362 3g39_A Variable lymphocyte rec 99.5 3.2E-14 1.1E-18 133.0 11.6 109 101-211 11-121 (170)
363 1dce_A Protein (RAB geranylger 99.5 1.3E-14 4.6E-19 161.7 10.3 106 101-210 443-551 (567)
364 1o6v_A Internalin A; bacterial 99.5 1.3E-14 4.3E-19 158.7 9.7 145 74-227 221-365 (466)
365 1a9n_A U2A', U2A'; complex (nu 99.5 7E-15 2.4E-19 138.4 6.1 130 94-226 14-151 (176)
366 4fmz_A Internalin; leucine ric 99.5 2.1E-14 7E-19 150.6 10.1 146 74-227 177-323 (347)
367 3cvr_A Invasion plasmid antige 99.5 3.7E-14 1.3E-18 157.5 12.3 114 74-205 80-193 (571)
368 2r9u_A Variable lymphocyte rec 99.5 6E-14 2.1E-18 131.6 11.2 108 101-210 14-123 (174)
369 1ds9_A Outer arm dynein; leuci 99.5 6.4E-17 2.2E-21 155.5 -10.2 133 74-210 18-158 (198)
370 1xeu_A Internalin C; cellular 99.5 7.5E-14 2.6E-18 140.3 11.8 125 73-207 62-187 (263)
371 3bz5_A Internalin-J, INLJ; leu 99.5 1.3E-13 4.6E-18 149.9 14.1 118 74-203 42-159 (457)
372 3g06_A SSPH2 (leucine-rich rep 99.5 4.3E-14 1.5E-18 158.8 10.2 133 57-206 15-155 (622)
373 1dce_A Protein (RAB geranylger 99.5 5.7E-14 1.9E-18 156.6 10.9 107 76-187 443-550 (567)
374 1o6v_A Internalin A; bacterial 99.5 5.5E-14 1.9E-18 153.7 10.5 146 73-227 198-343 (466)
375 3bz5_A Internalin-J, INLJ; leu 99.5 9.3E-14 3.2E-18 151.1 12.0 142 74-227 148-298 (457)
376 2ifg_A High affinity nerve gro 99.5 1.3E-13 4.5E-18 144.5 10.7 107 64-184 8-117 (347)
377 1jl5_A Outer protein YOPM; leu 99.5 4.4E-13 1.5E-17 145.7 15.1 117 99-225 131-247 (454)
378 4fmz_A Internalin; leucine ric 99.4 2.7E-13 9.4E-18 141.9 11.4 143 74-225 44-187 (347)
379 2ast_B S-phase kinase-associat 99.4 3.9E-15 1.3E-19 155.3 -3.5 114 63-180 36-152 (336)
380 1jl5_A Outer protein YOPM; leu 99.4 1.2E-12 4E-17 142.3 15.3 137 74-226 131-268 (454)
381 3g06_A SSPH2 (leucine-rich rep 99.4 1.4E-12 4.8E-17 146.5 14.6 51 170-225 221-271 (622)
382 2ifg_A High affinity nerve gro 99.4 3.8E-13 1.3E-17 141.0 9.3 107 102-209 11-120 (347)
383 2ast_B S-phase kinase-associat 99.4 2.8E-14 9.6E-19 148.8 -2.9 154 74-229 70-236 (336)
384 4ay9_X Follicle-stimulating ho 99.4 2E-12 6.9E-17 135.6 11.1 154 73-226 53-213 (350)
385 2ca6_A RAN GTPase-activating p 99.3 4.8E-14 1.7E-18 150.1 -4.9 61 122-182 159-228 (386)
386 3goz_A Leucine-rich repeat-con 99.3 2.8E-13 9.6E-18 142.9 0.2 152 74-226 22-207 (362)
387 2ca6_A RAN GTPase-activating p 99.3 2E-13 7E-18 145.3 -1.6 153 74-226 32-227 (386)
388 1ds9_A Outer arm dynein; leuci 99.3 2.2E-14 7.7E-19 137.7 -9.2 131 95-229 14-154 (198)
389 3goz_A Leucine-rich repeat-con 99.2 1E-12 3.4E-17 138.6 0.8 148 78-226 2-178 (362)
390 3tm0_A Aminoglycoside 3'-phosp 99.1 2.1E-10 7E-15 115.0 9.2 132 396-540 21-211 (263)
391 1z7x_W Ribonuclease inhibitor; 99.1 4E-12 1.4E-16 138.5 -5.0 154 74-227 227-410 (461)
392 1z7x_W Ribonuclease inhibitor; 99.0 2.3E-12 7.9E-17 140.3 -7.1 152 74-226 199-381 (461)
393 3rw6_A Nuclear RNA export fact 99.0 1.5E-12 5.1E-17 129.6 -11.8 146 62-209 76-237 (267)
394 1nd4_A Aminoglycoside 3'-phosp 98.9 5.9E-10 2E-14 111.2 6.4 125 398-540 29-212 (264)
395 3sb4_A Hypothetical leucine ri 98.9 3.2E-09 1.1E-13 110.0 10.9 41 74-116 101-141 (329)
396 3dxp_A Putative acyl-COA dehyd 98.9 2.4E-09 8.2E-14 112.5 9.3 139 395-542 44-248 (359)
397 3un9_A NLR family member X1; l 98.9 4.9E-11 1.7E-15 125.8 -3.8 153 74-226 72-250 (372)
398 3sb4_A Hypothetical leucine ri 98.9 3.5E-09 1.2E-13 109.7 8.4 62 73-135 48-137 (329)
399 3un9_A NLR family member X1; l 98.8 2.9E-11 9.8E-16 127.6 -8.5 134 74-207 101-254 (372)
400 3sg8_A APH(2'')-ID; antibiotic 98.6 8.4E-09 2.9E-13 105.6 2.4 180 396-591 27-287 (304)
401 3ogk_B Coronatine-insensitive 98.6 2.5E-09 8.5E-14 120.2 -2.6 153 74-226 342-524 (592)
402 3rw6_A Nuclear RNA export fact 98.5 3.1E-09 1.1E-13 105.6 -3.8 113 84-198 126-257 (267)
403 3ogk_B Coronatine-insensitive 98.5 8E-09 2.7E-13 116.0 -1.5 102 76-179 140-252 (592)
404 3r70_A Aminoglycoside phosphot 98.4 5.5E-07 1.9E-11 92.7 9.1 130 395-543 43-238 (320)
405 2p1m_B Transport inhibitor res 98.3 2.5E-08 8.4E-13 112.0 -3.4 153 74-227 338-518 (594)
406 1io0_A Tropomodulin; LRR prote 98.3 6.3E-08 2.1E-12 91.3 -0.7 112 94-205 31-164 (185)
407 2ra8_A Uncharacterized protein 98.3 3.7E-07 1.3E-11 95.3 4.1 149 74-225 139-317 (362)
408 2p1m_B Transport inhibitor res 98.3 1.9E-08 6.4E-13 113.0 -6.6 152 74-227 314-493 (594)
409 4fdw_A Leucine rich hypothetic 98.2 4.4E-06 1.5E-10 88.7 11.6 124 75-205 158-284 (401)
410 3tdw_A Gentamicin resistance p 98.2 7.6E-06 2.6E-10 83.5 11.7 133 395-542 25-224 (306)
411 4fdw_A Leucine rich hypothetic 98.2 6.4E-06 2.2E-10 87.4 11.3 144 74-224 180-332 (401)
412 4gkh_A Aminoglycoside 3'-phosp 98.2 6.4E-06 2.2E-10 82.3 10.8 130 397-540 32-221 (272)
413 1io0_A Tropomodulin; LRR prote 98.2 1.5E-07 5.3E-12 88.6 -1.6 110 73-183 35-164 (185)
414 2ra8_A Uncharacterized protein 98.1 6.5E-07 2.2E-11 93.5 2.3 129 73-206 171-321 (362)
415 3d1u_A Putative fructosamine-3 98.0 1.3E-05 4.5E-10 80.9 9.5 74 395-474 21-97 (288)
416 3ovc_A Hygromycin-B 4-O-kinase 98.0 1.6E-05 5.5E-10 83.1 9.4 72 395-474 47-121 (362)
417 3ats_A Putative uncharacterize 97.8 1.4E-05 4.6E-10 83.5 6.0 81 395-475 26-121 (357)
418 2q83_A YTAA protein; 2635576, 97.7 0.0003 1E-08 72.5 14.3 138 396-540 39-250 (346)
419 2olc_A MTR kinase, methylthior 97.5 0.0003 1E-08 74.4 9.9 76 395-472 36-120 (397)
420 3jr1_A Putative fructosamine-3 97.2 0.00094 3.2E-08 67.9 9.9 74 395-474 42-118 (312)
421 3e4g_A ATP synthase subunit S, 97.2 0.00012 4.1E-09 67.3 2.6 81 100-180 62-149 (176)
422 2yle_A Protein spire homolog 1 97.2 0.003 1E-07 59.5 11.6 101 473-590 34-135 (229)
423 4gt6_A Cell surface protein; l 97.2 0.00093 3.2E-08 70.5 9.3 113 89-205 255-370 (394)
424 3f7w_A Putative fructosamine-3 97.0 0.0013 4.6E-08 66.0 8.6 74 395-474 21-97 (288)
425 3rfe_A Platelet glycoprotein I 96.9 0.00095 3.2E-08 58.3 5.5 54 103-158 12-67 (130)
426 1zyl_A Hypothetical protein YI 96.9 0.0055 1.9E-07 62.6 12.0 73 397-473 34-113 (328)
427 3dxq_A Choline/ethanolamine ki 96.9 0.0011 3.8E-08 67.1 6.5 28 514-542 175-202 (301)
428 2pyw_A Uncharacterized protein 96.9 0.0038 1.3E-07 66.4 10.9 77 510-588 231-313 (420)
429 3e4g_A ATP synthase subunit S, 96.8 0.00037 1.3E-08 64.0 2.0 83 74-157 61-150 (176)
430 3rfe_A Platelet glycoprotein I 96.7 0.0021 7.3E-08 56.1 6.3 55 78-135 12-68 (130)
431 4h09_A Hypothetical leucine ri 96.7 0.0047 1.6E-07 64.6 10.1 104 94-200 212-318 (379)
432 4gt6_A Cell surface protein; l 96.7 0.0045 1.5E-07 65.2 9.8 81 117-200 260-342 (394)
433 4h09_A Hypothetical leucine ri 96.6 0.0045 1.5E-07 64.7 8.7 122 75-201 218-342 (379)
434 2ppq_A HSK, HK, homoserine kin 96.6 0.011 3.7E-07 60.2 11.4 141 395-540 28-215 (322)
435 3csv_A Aminoglycoside phosphot 96.5 0.0052 1.8E-07 63.0 8.6 30 514-543 185-218 (333)
436 4fs7_A Uncharacterized protein 96.5 0.0086 2.9E-07 63.0 10.3 121 75-202 231-353 (394)
437 3feg_A Choline/ethanolamine ki 96.4 0.0046 1.6E-07 64.6 7.4 138 396-540 57-252 (379)
438 4fs7_A Uncharacterized protein 96.4 0.006 2.1E-07 64.2 8.0 122 74-202 253-376 (394)
439 1pgv_A TMD-1, tropomodulin TMD 96.1 0.00086 2.9E-08 62.8 -0.1 85 96-180 38-136 (197)
440 1pgv_A TMD-1, tropomodulin TMD 95.8 0.0011 3.8E-08 62.1 -1.1 110 72-182 39-169 (197)
441 3i1a_A Spectinomycin phosphotr 95.8 0.077 2.6E-06 54.4 12.8 29 514-542 208-236 (339)
442 1nw1_A Choline kinase (49.2 KD 95.7 0.029 9.8E-07 59.7 9.6 71 395-473 79-158 (429)
443 2qg7_A Ethanolamine kinase PV0 95.3 0.11 3.8E-06 55.5 12.1 73 395-474 114-188 (458)
444 3c5i_A Choline kinase; choline 95.1 0.05 1.7E-06 56.5 8.6 72 395-473 39-120 (369)
445 2k1k_A Ephrin type-A receptor 94.2 0.023 8E-07 37.2 2.2 29 278-306 8-36 (38)
446 2l2t_A Receptor tyrosine-prote 93.9 0.042 1.4E-06 37.1 3.0 30 281-310 10-39 (44)
447 2ks1_B Epidermal growth factor 93.7 0.07 2.4E-06 36.1 3.8 25 283-307 13-37 (44)
448 3f2s_A CK, chetk-alpha, cholin 93.7 0.088 3E-06 55.1 6.6 141 396-540 59-278 (401)
449 2jwa_A Receptor tyrosine-prote 92.5 0.066 2.3E-06 36.0 2.3 29 281-310 12-40 (44)
450 3mes_A Choline kinase; malaria 90.9 0.32 1.1E-05 51.3 6.7 73 395-474 76-157 (424)
451 4ano_A ESSB; membrane protein, 83.3 3 0.0001 39.2 7.7 114 445-592 48-163 (219)
452 3cxl_A N-chimerin; SH2, RHO-GA 80.9 0.15 5.1E-06 54.6 -2.5 61 395-458 148-215 (463)
453 4ann_A ESSB; membrane protein, 80.1 2.2 7.5E-05 40.0 5.5 117 444-593 42-159 (215)
454 2l34_A TYRO protein tyrosine k 63.6 3.3 0.00011 26.0 1.6 26 280-305 6-31 (33)
455 2lz0_A Uncharacterized protein 61.5 22 0.00074 28.7 6.8 47 84-132 6-53 (100)
456 3g15_A CK, chetk-alpha, cholin 56.4 5.2 0.00018 41.5 2.7 27 514-540 246-278 (401)
457 2l8s_A Integrin alpha-1; trans 46.7 22 0.00077 24.9 3.7 19 279-297 8-26 (54)
458 1iij_A ERBB-2 receptor protein 45.0 4.2 0.00014 25.8 -0.2 6 284-289 11-16 (35)
459 3ls8_A Phosphatidylinositol 3- 42.7 2.5E+02 0.0085 30.5 13.2 46 491-541 454-501 (614)
460 2x6h_A GH13170P, VPS34, phosph 38.8 2.2E+02 0.0076 31.5 12.2 45 492-541 529-575 (696)
461 2ks1_B Epidermal growth factor 36.9 35 0.0012 22.9 3.4 27 285-311 12-38 (44)
462 2lz0_A Uncharacterized protein 36.6 90 0.0031 24.9 6.6 45 110-155 7-52 (100)
463 2klu_A T-cell surface glycopro 35.4 18 0.00063 26.3 1.9 9 286-294 12-20 (70)
464 2k1a_A Integrin alpha-IIB; sin 34.3 31 0.0011 22.8 2.8 18 278-295 8-25 (42)
465 2knc_A Integrin alpha-IIB; tra 34.0 40 0.0014 23.7 3.4 20 278-297 10-29 (54)
466 2l2t_A Receptor tyrosine-prote 28.6 59 0.002 21.8 3.4 19 294-312 20-38 (44)
467 1zza_A Stannin, AG8_1; helix, 26.3 94 0.0032 22.9 4.4 12 301-312 32-43 (90)
468 2klu_A T-cell surface glycopro 26.0 86 0.0029 22.9 4.0 18 282-299 12-29 (70)
469 2llm_A Amyloid beta A4 protein 30.1 16 0.00055 24.1 0.0 13 281-293 17-29 (43)
470 2l9u_A Receptor tyrosine-prote 23.7 71 0.0024 19.8 2.8 22 287-308 13-34 (40)
471 3ox7_P MH027; urokinase-type p 21.0 23 0.0008 19.1 0.2 9 62-70 6-14 (23)
No 1
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.8e-53 Score=433.56 Aligned_cols=250 Identities=24% Similarity=0.401 Sum_probs=205.9
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCCH
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 474 (665)
+.||+|+||+||+|.+.+ .||||+++.........+.|.+|++++++++|||||+++|++.+ +..++|||||++|+|
T Consensus 42 ~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGsL 118 (307)
T 3omv_A 42 TRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSL 118 (307)
T ss_dssp EECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCBH
T ss_pred eEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCCH
Confidence 679999999999998765 48999998666555667889999999999999999999998865 568999999999999
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC-----CCC
Q 005999 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS-----SVE 549 (665)
Q Consensus 475 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~-----~~~ 549 (665)
.++++.. ...++|.+++.|+.|||.||+|||+++ |+||||||+|||+++++++||+|||+|+..... ...
T Consensus 119 ~~~l~~~----~~~l~~~~~~~i~~qia~gL~yLH~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~ 193 (307)
T 3omv_A 119 YKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193 (307)
T ss_dssp HHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCSSSEEEETTEEEEECCCSSCBC------------
T ss_pred HHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecc
Confidence 9999742 356999999999999999999999999 999999999999999999999999999765432 123
Q ss_pred CCCCCcccCCccccC--CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC---CchhhhHHHHHH
Q 005999 550 DPDTVAYKAPEIRKS--SRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD---GREENRLGMLTE 624 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~--~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~ 624 (665)
..||+.|||||++.. ...|+.++|||||||++|||+||+.||.+... ...+...+....... .....++..+.+
T Consensus 194 ~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~ 272 (307)
T 3omv_A 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-RDQIIFMVGRGYASPDLSKLYKNCPKAMKR 272 (307)
T ss_dssp CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-HHHHHHHHHTTCCCCCSTTSCTTSCHHHHH
T ss_pred cccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh-HHHHHHHHhcCCCCCCcccccccchHHHHH
Confidence 469999999999863 34589999999999999999999999976321 112233333222221 234567788999
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHHHHhh
Q 005999 625 VASVCSLKSPEQRPAMWQVLKMIQEIKES 653 (665)
Q Consensus 625 li~~cl~~dP~~RPt~~evl~~L~~~~~~ 653 (665)
|+.+||+.||++||||.||++.|+.+...
T Consensus 273 li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 273 LVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp HHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 99999999999999999999999988654
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.4e-52 Score=435.94 Aligned_cols=252 Identities=23% Similarity=0.391 Sum_probs=208.2
Q ss_pred hHhCcccceEEEEEEEC------CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVLD------NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 468 (665)
+.||+|+||+||+|.+. ++..||||+++... ....+.|.+|+++|++++|||||+++|+|.+++..++||||
T Consensus 47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 57999999999999864 47899999997543 35567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecc
Q 005999 469 QPNGSLFNLIHGSRS----------IRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYC 538 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~----------~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfg 538 (665)
|++|+|.++++..+. ....+++|.+++.|+.||+.||+|||+.+ |+||||||+|||+++++++||+|||
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLKp~NILl~~~~~~Ki~DFG 203 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIGDFG 203 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHhhEEECCCCcEEEcccc
Confidence 999999999985432 12356999999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCC-----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCC
Q 005999 539 LSVLSDSSS-----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDD 612 (665)
Q Consensus 539 l~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 612 (665)
+++...... ....||+.|||||++. +..++.++|||||||++|||+| |+.||... ...++...+..... .
T Consensus 204 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~-~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~--~~~~~~~~i~~g~~-~ 279 (329)
T 4aoj_A 204 MSRDIYSTDYYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIFTYGKQPWYQL--SNTEAIDCITQGRE-L 279 (329)
T ss_dssp ----------------CCCCGGGCCHHHHT-TCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS--CHHHHHHHHHHTCC-C
T ss_pred cceeccCCCcceecCcccccccccChhhhc-CCCCCccccccchHHHHHHHHcCCCCCCCCC--CHHHHHHHHHcCCC-C
Confidence 997654322 2345899999999997 6789999999999999999999 89999763 23344444443322 2
Q ss_pred CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhh
Q 005999 613 GREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKES 653 (665)
Q Consensus 613 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 653 (665)
..+..++..+.+|+.+||+.||++||||.||++.|+.+.+.
T Consensus 280 ~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 280 ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 34566788899999999999999999999999999998764
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.8e-53 Score=434.26 Aligned_cols=252 Identities=22% Similarity=0.396 Sum_probs=211.6
Q ss_pred hHhCcccceEEEEEEEC------CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVLD------NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 468 (665)
+.||+|+||+||+|.+. ++..||||+++... ....+.|.+|+++|++++|||||+++|+|.+++..++||||
T Consensus 19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred eEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC--hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEc
Confidence 67999999999999864 47889999997653 35567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCC--------CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccc
Q 005999 469 QPNGSLFNLIHGSR--------SIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLS 540 (665)
Q Consensus 469 ~~~gsL~~~l~~~~--------~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~ 540 (665)
|++|+|.++++..+ ......++|.+++.|+.||+.||+|||+++ |+||||||+|||+++++.+||+|||++
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDlKp~NILl~~~~~~Ki~DFGla 175 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDFGMS 175 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCSCH
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccCHhhEEECCCCcEEECCcccc
Confidence 99999999997532 123457999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC-----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCc
Q 005999 541 VLSDSSS-----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGR 614 (665)
Q Consensus 541 ~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 614 (665)
+...... ....||+.|||||++. +..|+.++|||||||++|||+| |+.||... ...++...+...... ..
T Consensus 176 ~~~~~~~~~~~~~~~~gt~~ymAPE~~~-~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~--~~~~~~~~i~~~~~~-~~ 251 (299)
T 4asz_A 176 RDVYSTDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSLGVVLWEIFTYGKQPWYQL--SNNEVIECITQGRVL-QR 251 (299)
T ss_dssp HHHTGGGCEEETTTEEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHHTCCC-CC
T ss_pred eecCCCCceeecCceecChhhcCHHHHc-CCCCCchhhHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHcCCCC-CC
Confidence 7654322 1224799999999997 6789999999999999999999 89999763 233555555443322 34
Q ss_pred hhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhh
Q 005999 615 EENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKES 653 (665)
Q Consensus 615 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 653 (665)
+..++..+.+|+.+||+.||++|||+.||++.|+++.+.
T Consensus 252 p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 252 PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 556788899999999999999999999999999988764
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.7e-52 Score=431.33 Aligned_cols=250 Identities=20% Similarity=0.316 Sum_probs=209.6
Q ss_pred hHhCcccceEEEEEEEC------CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVLD------NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 468 (665)
+.||+|+||+||+|.+. +++.||||+++.... ....+.|.+|+.++++++|||||+++|+|.+++..++||||
T Consensus 32 ~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~-~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey 110 (308)
T 4gt4_A 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE-GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY 110 (308)
T ss_dssp EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC-C-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC-hHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEc
Confidence 56999999999999863 567899999975543 34467899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeec
Q 005999 469 QPNGSLFNLIHGSRSI-----------RAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDY 537 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Df 537 (665)
|++|+|.++|+..... ....++|..+++|+.|||.||+|||+++ |+||||||+|||+++++++||+||
T Consensus 111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~~Ki~DF 189 (308)
T 4gt4_A 111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKLNVKISDL 189 (308)
T ss_dssp CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCS
T ss_pred CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCccccceEECCCCCEEECCc
Confidence 9999999999753211 1246999999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCC-----CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccC
Q 005999 538 CLSVLSDSS-----SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVD 611 (665)
Q Consensus 538 gl~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~ 611 (665)
|+++..... .....||+.|||||++. +..++.++|||||||++|||+| |+.||... ...++...+.....
T Consensus 190 Glar~~~~~~~~~~~~~~~gt~~ymAPE~l~-~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~--~~~~~~~~i~~~~~- 265 (308)
T 4gt4_A 190 GLFREVYAADYYKLLGNSLLPIRWMAPEAIM-YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY--SNQDVVEMIRNRQV- 265 (308)
T ss_dssp CCBCGGGGGGCBCSSSSSCBCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC--CHHHHHHHHHTTCC-
T ss_pred ccceeccCCCceeEecccccCCcccCHHHHh-CCCCCccchhhhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC-
Confidence 999765332 22346899999999987 6789999999999999999998 89999763 23355555544322
Q ss_pred CCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 005999 612 DGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650 (665)
Q Consensus 612 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 650 (665)
...+..++..+.+|+.+||+.||++||||.||++.|+..
T Consensus 266 ~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 266 LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 234567788999999999999999999999999999753
No 5
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.9e-51 Score=416.34 Aligned_cols=243 Identities=21% Similarity=0.344 Sum_probs=201.3
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEe----CCeEEEEEEec
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA----KGERLVIYDYQ 469 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~ 469 (665)
+.||+|+||+||+|... ++..||+|++..........+.|.+|++++++++|||||+++++|.+ ++..++|||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~ 111 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence 46999999999999965 68899999997665555667789999999999999999999999875 34689999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CeeccCCCCCceEeC-CCCceEEeecccccccCCCC
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS-WLIHGNLKSSNVLLG-ADFEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~-~iiH~Dlk~~Nill~-~~~~~kl~Dfgl~~~~~~~~ 547 (665)
+||+|.++++. ...+++..+..|+.||+.||+|||+++ +|+||||||+|||++ .++.+||+|||+|+......
T Consensus 112 ~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~ 186 (290)
T 3fpq_A 112 TSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 186 (290)
T ss_dssp CSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred CCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCc
Confidence 99999999974 356999999999999999999999875 599999999999998 47999999999997655432
Q ss_pred -CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHH
Q 005999 548 -VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVA 626 (665)
Q Consensus 548 -~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 626 (665)
....||+.|||||++. +.|+.++|||||||++|||+||+.||.... ....+...+.....+...+...+..+.+|+
T Consensus 187 ~~~~~GTp~YmAPE~~~--~~y~~~~DiwSlGvilyelltg~~Pf~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~li 263 (290)
T 3fpq_A 187 AKAVIGTPEFMAPEMYE--EKYDESVDVYAFGMCMLEMATSEYPYSECQ-NAAQIYRRVTSGVKPASFDKVAIPEVKEII 263 (290)
T ss_dssp BEESCSSCCCCCGGGGG--TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS-SHHHHHHHHTTTCCCGGGGGCCCHHHHHHH
T ss_pred cCCcccCccccCHHHcC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-cHHHHHHHHHcCCCCCCCCccCCHHHHHHH
Confidence 3446999999999986 359999999999999999999999997531 112333333322222223444566799999
Q ss_pred HHcccCCCCCCCCHHHHHH
Q 005999 627 SVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 627 ~~cl~~dP~~RPt~~evl~ 645 (665)
.+||++||++|||+.|+++
T Consensus 264 ~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 264 EGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHSCSSGGGSCCHHHHHT
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999986
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.7e-51 Score=428.01 Aligned_cols=244 Identities=22% Similarity=0.339 Sum_probs=202.3
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
.+.||+|+||+||+|... +++.||||++..........+.+.+|++++++++|||||+++++|.+++..|+||||++||
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg 108 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGG 108 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 367999999999999964 6899999999876655566788999999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC---CC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS---VE 549 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~---~~ 549 (665)
+|.+++... +...+++..++.|+.||+.||+|||+++ |+||||||+|||++.++++||+|||+++...... ..
T Consensus 109 ~L~~~i~~~---~~~~~~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 184 (350)
T 4b9d_A 109 DLFKRINAQ---KGVLFQEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA 184 (350)
T ss_dssp BHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHH
T ss_pred cHHHHHHHc---CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCCEEEcccccceeecCCcccccc
Confidence 999999753 3456789999999999999999999999 9999999999999999999999999998765432 22
Q ss_pred CCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 550 DPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
..||+.|||||++. +..|+.++|||||||++|||+||+.||... ...++...+...... ......+..+.+|+.+|
T Consensus 185 ~~GT~~YmAPE~l~-~~~y~~~~DiwSlGvilyemltG~~PF~~~--~~~~~~~~i~~~~~~-~~~~~~s~~~~~li~~~ 260 (350)
T 4b9d_A 185 CIGTPYYLSPEICE-NKPYNNKSDIWALGCVLYELCTLKHAFEAG--SMKNLVLKIISGSFP-PVSLHYSYDLRSLVSQL 260 (350)
T ss_dssp HHSCCTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHTCCC-CCCTTSCHHHHHHHHHH
T ss_pred cCCCccccCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCC-CCCccCCHHHHHHHHHH
Confidence 35999999999997 678999999999999999999999999763 222333333322221 23456678899999999
Q ss_pred ccCCCCCCCCHHHHHH
Q 005999 630 SLKSPEQRPAMWQVLK 645 (665)
Q Consensus 630 l~~dP~~RPt~~evl~ 645 (665)
|++||++|||+.|+++
T Consensus 261 L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 261 FKRNPRDRPSVNSILE 276 (350)
T ss_dssp TCSSGGGSCCHHHHHT
T ss_pred ccCChhHCcCHHHHhc
Confidence 9999999999999986
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.6e-51 Score=422.84 Aligned_cols=245 Identities=21% Similarity=0.277 Sum_probs=206.4
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||+||+|... +|+.||||+++.... ..+|+.++++++|||||+++++|.+++..|+||||++||+
T Consensus 64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~ 136 (336)
T 4g3f_A 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 136 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred cEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCc
Confidence 56999999999999964 689999999976542 2469999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCC-ceEEeecccccccCCCC-----
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCLSVLSDSSS----- 547 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~-~~kl~Dfgl~~~~~~~~----- 547 (665)
|.++++. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++ ++||+|||+++......
T Consensus 137 L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~ 210 (336)
T 4g3f_A 137 LGQLIKQ-----MGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL 210 (336)
T ss_dssp HHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEECTTSCCEEECCCTTCEEC---------
T ss_pred HHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccce
Confidence 9999974 346999999999999999999999999 99999999999999987 69999999998664321
Q ss_pred ---CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccC-CCchhhhHHHHH
Q 005999 548 ---VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVD-DGREENRLGMLT 623 (665)
Q Consensus 548 ---~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 623 (665)
....||+.|||||++. +..|+.++|||||||++|||+||+.||.... ...+...+...... ...+...+..+.
T Consensus 211 ~~~~~~~GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyemltG~~Pf~~~~--~~~~~~~i~~~~~~~~~~~~~~s~~~~ 287 (336)
T 4g3f_A 211 LTGDYIPGTETHMAPEVVM-GKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF--RGPLCLKIASEPPPIREIPPSCAPLTA 287 (336)
T ss_dssp ---CCCCCCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC--CSCCHHHHHHSCCGGGGSCTTSCHHHH
T ss_pred ecCCccccCccccCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC--HHHHHHHHHcCCCCchhcCccCCHHHH
Confidence 1235999999999997 6789999999999999999999999997643 22333333322111 123456778899
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHHHHHhhhc
Q 005999 624 EVASVCSLKSPEQRPAMWQVLKMIQEIKESVM 655 (665)
Q Consensus 624 ~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 655 (665)
+++.+||++||++|||+.|+++.|........
T Consensus 288 ~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 288 QAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999998887765
No 8
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=9.3e-51 Score=421.77 Aligned_cols=239 Identities=20% Similarity=0.313 Sum_probs=204.3
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||+||+|... +|+.||||++..... ...+.+.+|+++|++++|||||+++++|.+++..|+||||++||+
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~ 157 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 157 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEE
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence 56999999999999965 689999999975443 234568899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC---CCCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS---SVED 550 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~---~~~~ 550 (665)
|.+++.. ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++..... ....
T Consensus 158 L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 230 (346)
T 4fih_A 158 LTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 230 (346)
T ss_dssp HHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred HHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEECCCCCEEEecCcCceecCCCCCccccc
Confidence 9999974 34899999999999999999999999 999999999999999999999999999876443 2345
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhcc-CCCchhhhHHHHHHHHHHc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRV-DDGREENRLGMLTEVASVC 629 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~c 629 (665)
.||+.|||||++. +..|+.++||||+||++|||++|+.||... ...+....+..... ........+..+.+|+.+|
T Consensus 231 ~GTp~YmAPEvl~-~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~ 307 (346)
T 4fih_A 231 VGTPYWMAPELIS-RLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 307 (346)
T ss_dssp CSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHH
T ss_pred ccCcCcCCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHH
Confidence 7999999999987 678999999999999999999999999752 22233333333222 2234456778899999999
Q ss_pred ccCCCCCCCCHHHHHH
Q 005999 630 SLKSPEQRPAMWQVLK 645 (665)
Q Consensus 630 l~~dP~~RPt~~evl~ 645 (665)
|++||++|||+.|+++
T Consensus 308 L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 308 LVRDPAQRATAAELLK 323 (346)
T ss_dssp SCSSTTTSCCHHHHTT
T ss_pred cCCChhHCcCHHHHhc
Confidence 9999999999999986
No 9
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.6e-50 Score=420.39 Aligned_cols=258 Identities=21% Similarity=0.290 Sum_probs=211.6
Q ss_pred HhHhCcccceEEEEEEEC------CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCC-CCeeeeeEEEEeC-CeEEEE
Q 005999 394 AELLGRGSIGTTYKAVLD------NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSH-PNLVPIRAYFQAK-GERLVI 465 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~-~~~~lv 465 (665)
.+.||+|+||+||+|.+. .++.||||+++.... ....+.|.+|+++|.+++| ||||+++|+|.+. +..++|
T Consensus 69 ~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~-~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC-hHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 367999999999999854 357899999976554 2445779999999999955 8999999999764 568999
Q ss_pred EEecCCCCHHHHHhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEE
Q 005999 466 YDYQPNGSLFNLIHGSRS-----------IRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARL 534 (665)
Q Consensus 466 ~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl 534 (665)
||||++|+|.++|+..+. .....++|.+++.++.|||.||+|||+++ ||||||||+|||+++++.+||
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~vKi 226 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKI 226 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEE
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC-eecCccCccceeeCCCCCEEE
Confidence 999999999999975432 12345899999999999999999999999 999999999999999999999
Q ss_pred eecccccccCCCCC-----CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhh
Q 005999 535 TDYCLSVLSDSSSV-----EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTM 608 (665)
Q Consensus 535 ~Dfgl~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~ 608 (665)
+|||+|+....... ...||+.|||||++. +..|+.++|||||||++|||+| |+.||.... ....+...+...
T Consensus 227 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~-~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~-~~~~~~~~i~~g 304 (353)
T 4ase_A 227 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-IDEEFCRRLKEG 304 (353)
T ss_dssp CCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC-CSHHHHHHHHHT
T ss_pred CcchhhhhcccCCCceeeccccccccccCHHHHh-cCCCCCcccEeehHHHHHHHHhCCCCCCCCCC-HHHHHHHHHHcC
Confidence 99999986644321 224789999999997 6789999999999999999998 999997632 122344444433
Q ss_pred ccCCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcc
Q 005999 609 RVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMA 656 (665)
Q Consensus 609 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 656 (665)
.. ...++.++..+.+++.+||+.||++|||+.||++.|+++.+....
T Consensus 305 ~~-~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~~ 351 (353)
T 4ase_A 305 TR-MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 351 (353)
T ss_dssp CC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC-
T ss_pred CC-CCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhhC
Confidence 22 234456778899999999999999999999999999999876543
No 10
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.1e-49 Score=402.15 Aligned_cols=240 Identities=19% Similarity=0.322 Sum_probs=190.4
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||+||+|.. .+++.||+|+++..... ....+.+.+|++++++++|||||++++++.+++..|+||||+ +|
T Consensus 19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g 97 (275)
T 3hyh_A 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GN 97 (275)
T ss_dssp EEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CE
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CC
Confidence 6799999999999985 47899999999765432 233567899999999999999999999999999999999999 67
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC--CCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS--VED 550 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~--~~~ 550 (665)
+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||+++++++||+|||+|+...... ...
T Consensus 98 ~L~~~l~~-----~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~ 171 (275)
T 3hyh_A 98 ELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS 171 (275)
T ss_dssp EHHHHHHH-----SCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTCCEEECCSSCC------------
T ss_pred CHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCe
Confidence 99999874 346999999999999999999999999 9999999999999999999999999997765432 334
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHcc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCS 630 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 630 (665)
.||+.|||||++.+...++.++||||+||++|||+||+.||... ....+...+..... ..+...+..+.+|+.+||
T Consensus 172 ~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~--~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~~L 247 (275)
T 3hyh_A 172 CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE--SIPVLFKNISNGVY--TLPKFLSPGAAGLIKRML 247 (275)
T ss_dssp ---CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCC--CCCTTSCHHHHHHHHHHS
T ss_pred eECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHc
Confidence 69999999999984444568999999999999999999999752 22233333333222 234556778999999999
Q ss_pred cCCCCCCCCHHHHHH
Q 005999 631 LKSPEQRPAMWQVLK 645 (665)
Q Consensus 631 ~~dP~~RPt~~evl~ 645 (665)
++||++|||+.|+++
T Consensus 248 ~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 248 IVNPLNRISIHEIMQ 262 (275)
T ss_dssp CSSGGGSCCHHHHHH
T ss_pred cCChhHCcCHHHHHc
Confidence 999999999999987
No 11
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.3e-49 Score=410.54 Aligned_cols=249 Identities=22% Similarity=0.321 Sum_probs=194.5
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCC----eEEEEEEecC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKG----ERLVIYDYQP 470 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv~e~~~ 470 (665)
+.||+|+||+||+|.+. |+.||||+++... .....++.|+..+.+++|||||++++++.+++ ..++||||++
T Consensus 9 ~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~ 84 (303)
T 3hmm_A 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84 (303)
T ss_dssp EEEEECSSSEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred EEEeeCCCeEEEEEEEC-CEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCC
Confidence 57999999999999984 6789999996543 22233456777778899999999999998754 5799999999
Q ss_pred CCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCeeccCCCCCceEeCCCCceEEeecccccc
Q 005999 471 NGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA--------SWLIHGNLKSSNVLLGADFEARLTDYCLSVL 542 (665)
Q Consensus 471 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~--------~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~ 542 (665)
+|+|.++++. ..++|..+++++.|++.||+|||++ + |+||||||+|||++.++++||+|||+++.
T Consensus 85 ~gsL~~~l~~------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 85 HGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp TCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred CCcHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-EeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 9999999974 3589999999999999999999986 6 99999999999999999999999999976
Q ss_pred cCCCC-------CCCCCCCcccCCccccCCC-----CCCCcchHHHHHHHHHHHHhCCCCCCCCC----------CCCcc
Q 005999 543 SDSSS-------VEDPDTVAYKAPEIRKSSR-----RATSKSDVYAFGVLLLELLTGKHPSQHPY----------LAPPD 600 (665)
Q Consensus 543 ~~~~~-------~~~~gt~~y~aPE~~~~~~-----~~~~k~DvwSlGvvl~elltg~~P~~~~~----------~~~~~ 600 (665)
..... ....||+.|||||++.+.. .++.++|||||||++|||+||++||.... .....
T Consensus 158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 54322 1235999999999986321 36789999999999999999988764221 11112
Q ss_pred HHHHHHhhccCC---C-----chhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 601 MLEWVRTMRVDD---G-----REENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 601 ~~~~~~~~~~~~---~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
............ . .....+..+.+|+.+||+.||++||||.||++.|+++.++-
T Consensus 238 ~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 238 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 222222221111 1 12234567999999999999999999999999999987653
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.5e-50 Score=411.24 Aligned_cols=241 Identities=19% Similarity=0.289 Sum_probs=204.8
Q ss_pred HhHhCcccceEEEEEEE-CCeEEEEEEEecCCCc-hhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 394 AELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
.+.||+|+||+||+|.. .+++.||||++..... .....+.+.+|++++++++|||||+++++|++++..|+||||++|
T Consensus 37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~g 116 (311)
T 4aw0_A 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 116 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 36799999999999996 4789999999975432 123456789999999999999999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC-----
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS----- 546 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~----- 546 (665)
|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+|||+|+.....
T Consensus 117 G~L~~~i~~-----~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~ 190 (311)
T 4aw0_A 117 GELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190 (311)
T ss_dssp EEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCC
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCccc
Confidence 999999974 356999999999999999999999999 999999999999999999999999999876432
Q ss_pred CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHH
Q 005999 547 SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVA 626 (665)
Q Consensus 547 ~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 626 (665)
.....||+.|||||++. +..|+.++||||+||++|||+||+.||... ...++...+.... ...++..+..+.+|+
T Consensus 191 ~~~~~GTp~YmAPEvl~-~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~--~~~p~~~s~~~~dli 265 (311)
T 4aw0_A 191 ANSFVGTAQYVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAG--NEGLIFAKIIKLE--YDFPEKFFPKARDLV 265 (311)
T ss_dssp BCCCCSCGGGCCHHHHH-HSCBCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTC--CCCCTTCCHHHHHHH
T ss_pred ccCcccCcccCCHHHHc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHcCC--CCCCcccCHHHHHHH
Confidence 22346999999999997 677999999999999999999999999752 2223433333322 234556778899999
Q ss_pred HHcccCCCCCCCCHHHHHH
Q 005999 627 SVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 627 ~~cl~~dP~~RPt~~evl~ 645 (665)
.+||++||++|||+.|++.
T Consensus 266 ~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 266 EKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp HHHSCSSGGGSTTSGGGTC
T ss_pred HHHccCCHhHCcChHHHcC
Confidence 9999999999999998743
No 13
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.7e-49 Score=422.43 Aligned_cols=239 Identities=20% Similarity=0.313 Sum_probs=204.1
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.+|++++|||||+++++|.+++..|+|||||+||+
T Consensus 157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~ 234 (423)
T 4fie_A 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 234 (423)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESTTC--SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred eEeccCcCcEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCc
Confidence 57999999999999965 689999999976543 334568899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC---CCCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS---SVED 550 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~---~~~~ 550 (665)
|.++++. ..+++..+..|+.||+.||+|||+++ |+||||||+||||+.+|++||+|||++...... ....
T Consensus 235 L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH~~~-IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 307 (423)
T 4fie_A 235 LTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 307 (423)
T ss_dssp HHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCC
T ss_pred HHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEecCccceECCCCCcccccc
Confidence 9999974 34899999999999999999999999 999999999999999999999999999776443 2344
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhcc-CCCchhhhHHHHHHHHHHc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRV-DDGREENRLGMLTEVASVC 629 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~c 629 (665)
.||+.|||||++. +..|+.++|||||||++|||++|+.||... ...+....+..... ........+..+.+|+.+|
T Consensus 308 ~GTp~YmAPEvl~-~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~ 384 (423)
T 4fie_A 308 VGTPYWMAPELIS-RLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 384 (423)
T ss_dssp EECTTTCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHH
T ss_pred ccCcCcCCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHH
Confidence 6999999999987 678999999999999999999999999752 22234444433222 2223456678899999999
Q ss_pred ccCCCCCCCCHHHHHH
Q 005999 630 SLKSPEQRPAMWQVLK 645 (665)
Q Consensus 630 l~~dP~~RPt~~evl~ 645 (665)
|.+||++|||+.|+++
T Consensus 385 L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 385 LVRDPAQRATAAELLK 400 (423)
T ss_dssp SCSSTTTSCCHHHHTT
T ss_pred cCCChhHCcCHHHHhc
Confidence 9999999999999987
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1e-49 Score=407.91 Aligned_cols=241 Identities=22% Similarity=0.304 Sum_probs=196.1
Q ss_pred HhHhCcccceEEEEEEEC----CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEec
Q 005999 394 AELLGRGSIGTTYKAVLD----NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQ 469 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 469 (665)
.+.||+|+||+||+|+.. .++.||||+++...........+.+|++++++++|||||+++++|.+++..|+||||+
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~ 108 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFL 108 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcC
Confidence 467999999999999852 4789999999765433333456888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC---
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS--- 546 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~--- 546 (665)
+||+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+|||+|+.....
T Consensus 109 ~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 182 (304)
T 3ubd_A 109 RGGDLFTRLSK-----EVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 182 (304)
T ss_dssp TTCEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTSCEEEESSEEEEC-----CC
T ss_pred CCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHeEEcCCCCEEecccccceeccCCCcc
Confidence 99999999974 346999999999999999999999999 999999999999999999999999999765332
Q ss_pred CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHH
Q 005999 547 SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVA 626 (665)
Q Consensus 547 ~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 626 (665)
.....||+.|||||++. +..|+.++||||+||++|||+||+.||... ...++...+... ....+...+..+.+|+
T Consensus 183 ~~~~~GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyemltG~~PF~~~--~~~~~~~~i~~~--~~~~p~~~s~~~~~li 257 (304)
T 3ubd_A 183 AYSFCGTVEYMAPEVVN-RRGHTQSADWWSFGVLMFEMLTGTLPFQGK--DRKETMTMILKA--KLGMPQFLSPEAQSLL 257 (304)
T ss_dssp CCSCCCCGGGCCHHHHH-TSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHC--CCCCCTTSCHHHHHHH
T ss_pred ccccccCcccCCHHHhc-cCCCCCCCcccchHHHHHHHHhCCCCCCCc--CHHHHHHHHHcC--CCCCCCcCCHHHHHHH
Confidence 23456999999999997 678999999999999999999999999752 222333333332 2234556778899999
Q ss_pred HHcccCCCCCCCCH-----HHHHH
Q 005999 627 SVCSLKSPEQRPAM-----WQVLK 645 (665)
Q Consensus 627 ~~cl~~dP~~RPt~-----~evl~ 645 (665)
.+||++||++|||+ +|+++
T Consensus 258 ~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 258 RMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp HHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred HHHcccCHHHCCCCCcCCHHHHHc
Confidence 99999999999984 56664
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2e-47 Score=392.36 Aligned_cols=240 Identities=20% Similarity=0.326 Sum_probs=186.2
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCC------------
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKG------------ 460 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------------ 460 (665)
.+.||+|+||+||+|... +++.||||+++.... +...+.+.+|+++|++++|||||+++++|.+.+
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~ 88 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKV 88 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCc
Confidence 367999999999999964 688999999975543 345577899999999999999999999987644
Q ss_pred eEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccc
Q 005999 461 ERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLS 540 (665)
Q Consensus 461 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~ 540 (665)
..|+||||+++|+|.+++.... .....++..++.|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|
T Consensus 89 ~l~ivmE~~~gg~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~al~ylH~~~-IiHRDlKp~NILl~~~~~vKl~DFGla 165 (299)
T 4g31_A 89 YLYIQMQLCRKENLKDWMNGRC--TIEERERSVCLHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLV 165 (299)
T ss_dssp EEEEEEECCCSCCHHHHHHTCC--SGGGSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCCCC
T ss_pred EEEEEEecCCCCcHHHHHHhcC--CCChhHHHHHHHHHHHHHHHHHHHHHCc-CccccCcHHHeEECCCCcEEEccCccc
Confidence 3689999999999999998532 2334677788999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC---------------CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHH
Q 005999 541 VLSDSSS---------------VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWV 605 (665)
Q Consensus 541 ~~~~~~~---------------~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~ 605 (665)
+...... ....||+.|||||++. +..|+.++|||||||++|||++ ||... .+....+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyell~---Pf~~~----~~~~~~~ 237 (299)
T 4g31_A 166 TAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIH-GNSYSHKVDIFSLGLILFELLY---PFSTQ----MERVRTL 237 (299)
T ss_dssp --------------------------CCCTTSCHHHHT-TCCCCTHHHHHHHHHHHHHHHS---CCSSH----HHHHHHH
T ss_pred eecCCCccccccccccccccccCCcccCccccCHHHHc-CCCCCCHHHHHHHHHHHHHHcc---CCCCc----cHHHHHH
Confidence 7654321 1235999999999997 6789999999999999999996 76531 1222222
Q ss_pred HhhccCC--CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 606 RTMRVDD--GREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 606 ~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
....... .........+.+|+.+||++||++|||+.|+++
T Consensus 238 ~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 238 TDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 2221111 122334455788999999999999999999986
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.2e-46 Score=395.77 Aligned_cols=243 Identities=21% Similarity=0.257 Sum_probs=198.2
Q ss_pred HhHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEe------CCeEEEEE
Q 005999 394 AELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA------KGERLVIY 466 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~~~lv~ 466 (665)
.+.||+|+||+||+|.. .+|+.||||+++.........+.+.+|+++|++++|||||++++++.. .+..|+||
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivm 138 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEE
Confidence 36799999999999996 478999999998766555566788899999999999999999999764 35789999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC
Q 005999 467 DYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS 546 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 546 (665)
||+. |+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 139 E~~~-g~L~~~i~~-----~~~l~~~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~ 211 (398)
T 4b99_A 139 DLME-SDLHQIIHS-----SQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLCTS 211 (398)
T ss_dssp ECCS-EEHHHHHTS-----SSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCC---
T ss_pred eCCC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCc-CcCCCcCccccccCCCCCEEEeecceeeecccC
Confidence 9996 689999973 457999999999999999999999999 999999999999999999999999999765321
Q ss_pred -------CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC------
Q 005999 547 -------SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG------ 613 (665)
Q Consensus 547 -------~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~------ 613 (665)
.....||+.|||||++.+...++.++||||+||++|||++|++||... ...+....+........
T Consensus 212 ~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~--~~~~~l~~I~~~~g~p~~~~~~~ 289 (398)
T 4b99_A 212 PAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK--NYVHQLQLIMMVLGTPSPAVIQA 289 (398)
T ss_dssp ----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS--SHHHHHHHHHHHHCCCCGGGTC-
T ss_pred ccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC--CHHHHHHHHHHhcCCCChHHhhh
Confidence 233479999999999875567899999999999999999999999753 12222222221111100
Q ss_pred -----------------------chhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 614 -----------------------REENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 614 -----------------------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.....+..+.+|+.+||..||++|||+.|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 01123567889999999999999999999987
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=9.4e-45 Score=382.58 Aligned_cols=239 Identities=16% Similarity=0.268 Sum_probs=191.6
Q ss_pred HhHhCcccceEEEEEEEC----CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEe
Q 005999 394 AELLGRGSIGTTYKAVLD----NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDY 468 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 468 (665)
.+.||+|+||+||+|..+ .++.||+|++..... ...+.+|+++++.+ +||||++++++|.++++.|+||||
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~----~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~ 101 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH----PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPY 101 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC----HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEEC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC----HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeC
Confidence 367999999999999853 578999999865432 34577899999988 799999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCC-CceEEeecccccccCCCC
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD-FEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~-~~~kl~Dfgl~~~~~~~~ 547 (665)
+++|+|.++++ .+++.++..++.||+.||+|||+++ |+||||||+|||++.+ +++||+|||+|+......
T Consensus 102 ~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~g-IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~ 172 (361)
T 4f9c_A 102 LEHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK 172 (361)
T ss_dssp CCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCS
T ss_pred CCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCC-eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcc
Confidence 99999999984 3889999999999999999999999 9999999999999876 799999999996543221
Q ss_pred -------------------------------CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCC
Q 005999 548 -------------------------------VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYL 596 (665)
Q Consensus 548 -------------------------------~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~ 596 (665)
....||+.|||||++.+...++.++||||+||++|||++|+.||.....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~ 252 (361)
T 4f9c_A 173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD 252 (361)
T ss_dssp CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCC
Confidence 1235899999999987556789999999999999999999999965322
Q ss_pred CCccHHHHHH----------------------------------hhccCC-----------------CchhhhHHHHHHH
Q 005999 597 APPDMLEWVR----------------------------------TMRVDD-----------------GREENRLGMLTEV 625 (665)
Q Consensus 597 ~~~~~~~~~~----------------------------------~~~~~~-----------------~~~~~~~~~l~~l 625 (665)
+...+..... ...... ......+....+|
T Consensus 253 ~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DL 332 (361)
T 4f9c_A 253 DLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDL 332 (361)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHH
T ss_pred HHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHH
Confidence 1111111110 000000 0112345678899
Q ss_pred HHHcccCCCCCCCCHHHHHH
Q 005999 626 ASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 626 i~~cl~~dP~~RPt~~evl~ 645 (665)
+.+||+.||++|||++|+++
T Consensus 333 l~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 333 LDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp HHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHCcCChhHCcCHHHHhc
Confidence 99999999999999999986
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.9e-44 Score=400.27 Aligned_cols=244 Identities=18% Similarity=0.223 Sum_probs=200.6
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCch----hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEe
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA----DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDY 468 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 468 (665)
.+.||+|+||.||+|... +|+.||||++...... .......+.++.+++.++|||||+++++|.+.+..|+||||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy 273 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 273 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEec
Confidence 367999999999999965 6899999999654221 11223344557788899999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC-C
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS-S 547 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~-~ 547 (665)
++||+|.+++.. ...+++..+..++.||+.||+|||+++ ||||||||+||||+.+|++||+|||+|...... .
T Consensus 274 ~~GGdL~~~l~~-----~~~l~E~~a~~y~~qIl~aL~yLH~~g-IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~ 347 (689)
T 3v5w_A 274 MNGGDLHYHLSQ-----HGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 347 (689)
T ss_dssp CCSCBHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCCC
T ss_pred CCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHeEEeCCCCEEecccceeeecCCCCC
Confidence 999999999974 356999999999999999999999999 999999999999999999999999999776543 3
Q ss_pred CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc-cHHHHHHhhccCCCchhhhHHHHHHHH
Q 005999 548 VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP-DMLEWVRTMRVDDGREENRLGMLTEVA 626 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li 626 (665)
....||+.|||||++..+..|+.++||||+||++|||++|++||........ .+...+. ......+...+..+.+|+
T Consensus 348 ~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~--~~~~~~p~~~S~~a~dLI 425 (689)
T 3v5w_A 348 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL--TMAVELPDSFSPELRSLL 425 (689)
T ss_dssp CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHH--HCCCCCCTTSCHHHHHHH
T ss_pred CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc--CCCCCCCccCCHHHHHHH
Confidence 4457999999999987556799999999999999999999999975322221 2222222 222234556778899999
Q ss_pred HHcccCCCCCCCC-----HHHHHH
Q 005999 627 SVCSLKSPEQRPA-----MWQVLK 645 (665)
Q Consensus 627 ~~cl~~dP~~RPt-----~~evl~ 645 (665)
.+||++||++|++ +.||++
T Consensus 426 ~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 426 EGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred HHHccCCHhHCCCCCCCCHHHHhc
Confidence 9999999999998 688765
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6.4e-44 Score=398.68 Aligned_cols=242 Identities=21% Similarity=0.336 Sum_probs=204.6
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+++|+.++|||||+++++|.+++..|+|||||+||
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~--~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg 239 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE--SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGG 239 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCC
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccch--hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCC
Confidence 367999999999999964 789999999976542 44567899999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCC--CceEEeecccccccCCCC--C
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD--FEARLTDYCLSVLSDSSS--V 548 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~--~~~kl~Dfgl~~~~~~~~--~ 548 (665)
+|.+++.. ....+++..+..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+++...... .
T Consensus 240 ~L~~~i~~----~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~ 314 (573)
T 3uto_A 240 ELFEKVAD----EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314 (573)
T ss_dssp BHHHHHTC----TTSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred cHHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence 99999864 2346899999999999999999999999 9999999999999854 899999999998776543 2
Q ss_pred CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC--CchhhhHHHHHHHH
Q 005999 549 EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD--GREENRLGMLTEVA 626 (665)
Q Consensus 549 ~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li 626 (665)
...||+.|||||++. +..|+.++||||+||++|||++|+.||... ...+....+....... ......+..+.+|+
T Consensus 315 ~~~GT~~y~APEv~~-~~~y~~~~DiWSlGvilyeml~G~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli 391 (573)
T 3uto_A 315 VTTGTAEFAAPEVAE-GKPVGYYTDMWSVGVLSYILLSGLSPFGGE--NDDETLRNVKSCDWNMDDSAFSGISEDGKDFI 391 (573)
T ss_dssp EECSSGGGCCHHHHT-TCCBCHHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHH
T ss_pred eeEECccccCHHHhC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHhCCCCCCcccccCCCHHHHHHH
Confidence 336999999999997 678999999999999999999999999763 2223333333322221 23345677899999
Q ss_pred HHcccCCCCCCCCHHHHHH
Q 005999 627 SVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 627 ~~cl~~dP~~RPt~~evl~ 645 (665)
.+||+.||++|||+.|+++
T Consensus 392 ~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 392 RKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp HTTSCSSGGGSCCHHHHHH
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999987
No 20
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.3e-42 Score=360.43 Aligned_cols=257 Identities=27% Similarity=0.408 Sum_probs=205.5
Q ss_pred HhHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
.+.||+|+||+||+|.. .+..||||++..........+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 120 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCB
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCc
Confidence 36799999999999987 46789999998766555666789999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CeeccCCCCCceEeCCCCceEEeecccccccCCC---CCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS-WLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS---SVE 549 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~-~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~---~~~ 549 (665)
|.+++.... ....+++..++.++.||+.||+|||+.+ +|+||||||+||+++.++.+||+|||++...... ...
T Consensus 121 L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~ 198 (309)
T 3p86_A 121 LYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS 198 (309)
T ss_dssp HHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC--------------
T ss_pred HHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccccccc
Confidence 999997421 1234899999999999999999999976 4999999999999999999999999999755443 223
Q ss_pred CCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 550 DPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
..||+.|+|||++. +..++.++|||||||++|||++|+.||... ...+....+.........+...+..+.+++.+|
T Consensus 199 ~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~Pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 275 (309)
T 3p86_A 199 AAGTPEWMAPEVLR-DEPSNEKSDVYSFGVILWELATLQQPWGNL--NPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGC 275 (309)
T ss_dssp ---CCTTSCHHHHT-TCCCCTTHHHHHHHHHHHHHHHCCCTTTTS--CHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHH
T ss_pred CCCCccccChhhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHH
Confidence 46899999999987 567899999999999999999999999753 222333333322333344556778899999999
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHhhhcc
Q 005999 630 SLKSPEQRPAMWQVLKMIQEIKESVMA 656 (665)
Q Consensus 630 l~~dP~~RPt~~evl~~L~~~~~~~~~ 656 (665)
|+.||++|||+.|+++.|+.+.+....
T Consensus 276 l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 276 WTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred ccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999876543
No 21
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.5e-42 Score=364.82 Aligned_cols=257 Identities=22% Similarity=0.357 Sum_probs=213.3
Q ss_pred HhHhCcccceEEEEEEE--------CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEE
Q 005999 394 AELLGRGSIGTTYKAVL--------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLV 464 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 464 (665)
.+.||+|+||.||+|.. .++..||||+++.... ....+.+.+|+++++++ +||||+++++++.+++..++
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCB-HHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcC-HHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 36799999999999985 3567899999976543 34567799999999999 89999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceE
Q 005999 465 IYDYQPNGSLFNLIHGSRS-----------IRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEAR 533 (665)
Q Consensus 465 v~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~k 533 (665)
||||+++|+|.+++...+. .....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+|
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~k 243 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMK 243 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEE
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchhhEEECCCCCEE
Confidence 9999999999999986431 12345899999999999999999999999 99999999999999999999
Q ss_pred EeecccccccCCCC-----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHh
Q 005999 534 LTDYCLSVLSDSSS-----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT 607 (665)
Q Consensus 534 l~Dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~ 607 (665)
|+|||++....... ....+|+.|+|||++. +..++.++|||||||++|||++ |+.||... ...++...+..
T Consensus 244 l~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~DvwslG~il~ellt~g~~p~~~~--~~~~~~~~~~~ 320 (370)
T 2psq_A 244 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKE 320 (370)
T ss_dssp ECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHH-TCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CGGGHHHHHHT
T ss_pred EccccCCcccCcccceecccCCCcccceECHhHhc-CCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHhc
Confidence 99999997654322 2224678899999987 5779999999999999999999 99999763 23344444433
Q ss_pred hccCCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcc
Q 005999 608 MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMA 656 (665)
Q Consensus 608 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 656 (665)
... ...+..++..+.+++.+||+.||++|||+.|+++.|+.+......
T Consensus 321 ~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~~ 368 (370)
T 2psq_A 321 GHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 368 (370)
T ss_dssp TCC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred CCC-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 322 223456677899999999999999999999999999999876554
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.6e-42 Score=358.38 Aligned_cols=249 Identities=20% Similarity=0.373 Sum_probs=209.1
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||+||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||||+++|+
T Consensus 16 ~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 93 (310)
T 3s95_A 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFD--EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGT 93 (310)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEESCCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred ceecCCCCEEEEEEEECCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCc
Confidence 67999999999999965 68899999985543 3556789999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCCC-----
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSV----- 548 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~----- 548 (665)
|.++++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 94 L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 168 (310)
T 3s95_A 94 LRGIIKSM----DSQYPWSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168 (310)
T ss_dssp HHHHHHHC----CTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEECTTSCEEECCCTTCEECC---------
T ss_pred HHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCcCeEEECCCCCEEEeecccceeccccccccccc
Confidence 99999852 356899999999999999999999999 99999999999999999999999999976543221
Q ss_pred ------------CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc----cHHHHHHhhccCC
Q 005999 549 ------------EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP----DMLEWVRTMRVDD 612 (665)
Q Consensus 549 ------------~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~----~~~~~~~~~~~~~ 612 (665)
...||+.|+|||++. +..++.++||||||+++|||++|..|+........ .........
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~---- 243 (310)
T 3s95_A 169 RSLKKPDRKKRYTVVGNPYWMAPEMIN-GRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY---- 243 (310)
T ss_dssp -----------CCCCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT----
T ss_pred ccccccccccccccCCCcceeCHHHhc-CCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc----
Confidence 335899999999987 67889999999999999999999999875432221 222222221
Q ss_pred CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcc
Q 005999 613 GREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMA 656 (665)
Q Consensus 613 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 656 (665)
.+...+..+.+++.+||+.||++|||+.|+++.|+.+......
T Consensus 244 -~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~ 286 (310)
T 3s95_A 244 -CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG 286 (310)
T ss_dssp -CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred -CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence 1234556799999999999999999999999999999877643
No 23
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.4e-42 Score=359.15 Aligned_cols=242 Identities=19% Similarity=0.282 Sum_probs=204.4
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|.. .+++.||+|++..........+.+.+|+++++.++||||+++++++...+..++||||+++|+
T Consensus 21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~ 100 (328)
T 3fe3_A 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE 100 (328)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCB
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCc
Confidence 6799999999999997 578999999997765555566788999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC--CCCCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS--SVEDP 551 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~--~~~~~ 551 (665)
|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++...... .....
T Consensus 101 L~~~l~~-----~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 174 (328)
T 3fe3_A 101 VFDYLVA-----HGRMKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC 174 (328)
T ss_dssp HHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTS
T ss_pred HHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcccccc
Confidence 9999874 245899999999999999999999999 999999999999999999999999999765433 23446
Q ss_pred CCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHccc
Q 005999 552 DTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSL 631 (665)
Q Consensus 552 gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 631 (665)
||+.|+|||++.+....+.++||||+||++|||++|+.||... ...++...+..... ..+...+..+.+++.+||+
T Consensus 175 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~~L~ 250 (328)
T 3fe3_A 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ--NLKELRERVLRGKY--RIPFYMSTDCENLLKRFLV 250 (328)
T ss_dssp SSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHCC
T ss_pred CCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHCC
Confidence 8999999999984444458999999999999999999999763 12233333332221 2344566789999999999
Q ss_pred CCCCCCCCHHHHHHH
Q 005999 632 KSPEQRPAMWQVLKM 646 (665)
Q Consensus 632 ~dP~~RPt~~evl~~ 646 (665)
.||++|||+.|+++.
T Consensus 251 ~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 251 LNPIKRGTLEQIMKD 265 (328)
T ss_dssp SSTTTSCCHHHHTTC
T ss_pred CChhHCcCHHHHhcC
Confidence 999999999999863
No 24
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.2e-41 Score=345.84 Aligned_cols=247 Identities=26% Similarity=0.402 Sum_probs=209.4
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCCH
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 474 (665)
+.||+|+||.||+|...++..||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||+++|+|
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 92 (269)
T 4hcu_A 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL 92 (269)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBH
T ss_pred heecCCCccEEEEEEecCCCeEEEEEeccccc---CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcH
Confidence 57999999999999998888999999976543 346789999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC----CCCC
Q 005999 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS----SVED 550 (665)
Q Consensus 475 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~----~~~~ 550 (665)
.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ....
T Consensus 93 ~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 167 (269)
T 4hcu_A 93 SDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 167 (269)
T ss_dssp HHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTST
T ss_pred HHHHHhc----CcccCHHHHHHHHHHHHHHHHHHHhCC-eecCCcchheEEEcCCCCEEeccccccccccccccccccCc
Confidence 9999742 346899999999999999999999999 999999999999999999999999999765432 2233
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
.+|+.|+|||.+. +..++.++||||+|+++|||++ |+.||... ...+....+.... ....+...+..+.+++.+|
T Consensus 168 ~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~ 243 (269)
T 4hcu_A 168 KFPVKWASPEVFS-FSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGF-RLYKPRLASTHVYQIMNHC 243 (269)
T ss_dssp TCCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTC-CCCCCTTSCHHHHHHHHHH
T ss_pred ccccccCCHHHhc-CCCCCchhhhHHHHHHHHHHhcCCCCCCCCC--CHHHHHHHHhcCc-cCCCCCcCCHHHHHHHHHH
Confidence 5678899999987 5678999999999999999999 99999752 2223333333221 1223445577899999999
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHhh
Q 005999 630 SLKSPEQRPAMWQVLKMIQEIKES 653 (665)
Q Consensus 630 l~~dP~~RPt~~evl~~L~~~~~~ 653 (665)
|+.||++|||+.|+++.|+++.+.
T Consensus 244 l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 244 WRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccCCcccCcCHHHHHHHHHHHHHc
Confidence 999999999999999999999875
No 25
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=9.4e-42 Score=356.04 Aligned_cols=254 Identities=30% Similarity=0.497 Sum_probs=211.2
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCCH
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 474 (665)
+.||+|+||.||+|...++..||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 45 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 122 (321)
T 2qkw_B 45 FLIGHGVFGKVYKGVLRDGAKVALKRRTPESS--QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL 122 (321)
T ss_dssp CCSCBCSSSEEEEEECTTCCEEEEEECCSCCS--SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBT
T ss_pred ceeecCCCeeEEEEEECCCCEEEEEEecccCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcH
Confidence 57999999999999988899999999876543 4567789999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC-----CC
Q 005999 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS-----VE 549 (665)
Q Consensus 475 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-----~~ 549 (665)
.+++.... .....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ..
T Consensus 123 ~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 200 (321)
T 2qkw_B 123 KRHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTV 200 (321)
T ss_dssp GGGSSSSC-CCSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCC
T ss_pred HHHHhccC-CCccccCHHHHHHHHHHHHHHHHHhcCCC-eecCCCCHHHEEECCCCCEEEeecccccccccccccccccc
Confidence 99987532 23346999999999999999999999999 9999999999999999999999999997643321 12
Q ss_pred CCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc-cHHHHHHhhccC------------CCchh
Q 005999 550 DPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP-DMLEWVRTMRVD------------DGREE 616 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~-~~~~~~~~~~~~------------~~~~~ 616 (665)
..||+.|+|||++. +..++.++|||||||++|||++|+.||........ ....|....... .....
T Consensus 201 ~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (321)
T 2qkw_B 201 VKGTLGYIDPEYFI-KGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRP 279 (321)
T ss_dssp CEEETTTCCHHHHH-HCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCH
T ss_pred cCCCccccCHHHhc-CCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCH
Confidence 24789999999987 56789999999999999999999999976433222 333332221111 11244
Q ss_pred hhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhh
Q 005999 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKES 653 (665)
Q Consensus 617 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 653 (665)
..+..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 280 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 280 ESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp HHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 6678899999999999999999999999999988753
No 26
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=355.75 Aligned_cols=253 Identities=21% Similarity=0.364 Sum_probs=208.9
Q ss_pred HhHhCcccceEEEEEEEC----CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEec
Q 005999 394 AELLGRGSIGTTYKAVLD----NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQ 469 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 469 (665)
.+.||+|+||.||+|... .+..||||+++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT-ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECC
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCC
Confidence 367999999999999974 466799999976543 345677999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCCC-
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSV- 548 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~- 548 (665)
++|+|.++++. ....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 133 ~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 207 (325)
T 3kul_A 133 ENGSLDTFLRT----HDGQFTIMQLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207 (325)
T ss_dssp TTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCSSCEECC----C
T ss_pred CCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEECCCCCEEECCCCcccccccCccc
Confidence 99999999974 2346999999999999999999999999 99999999999999999999999999976654321
Q ss_pred -----CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHH
Q 005999 549 -----EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGML 622 (665)
Q Consensus 549 -----~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 622 (665)
...+|+.|+|||++. +..++.++|||||||++|||++ |+.||... ...++...+.... ....+...+..+
T Consensus 208 ~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~~g~~p~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~l 283 (325)
T 3kul_A 208 AYTTTGGKIPIRWTAPEAIA-FRTFSSASDVWSFGVVMWEVLAYGERPYWNM--TNRDVISSVEEGY-RLPAPMGCPHAL 283 (325)
T ss_dssp CEECC---CCGGGSCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCTTTTS--CHHHHHHHHHTTC-CCCCCTTCCHHH
T ss_pred eeeccCCCCcccccCHhHhc-CCCCCcHHHHHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHcCC-CCCCCCCcCHHH
Confidence 123577899999987 5678999999999999999999 99999653 2223333333221 222345667889
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcc
Q 005999 623 TEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMA 656 (665)
Q Consensus 623 ~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 656 (665)
.+++.+||+.||++|||+.|+++.|+.+.+....
T Consensus 284 ~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 284 HQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999876543
No 27
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.2e-41 Score=351.33 Aligned_cols=240 Identities=20% Similarity=0.332 Sum_probs=202.0
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||+||+|.. .+++.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++||||+.+|+
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGS 103 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeecccc--cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCC
Confidence 5799999999999984 5788999999875543 335678899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC---CCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS---VED 550 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~---~~~ 550 (665)
|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ...
T Consensus 104 L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 176 (297)
T 3fxz_A 104 LTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176 (297)
T ss_dssp HHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred HHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCc
Confidence 9999974 24899999999999999999999999 9999999999999999999999999987654432 334
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHcc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCS 630 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 630 (665)
.||+.|+|||++. +..++.++|||||||++|||++|+.||..... .................+...+..+.+++.+||
T Consensus 177 ~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 254 (297)
T 3fxz_A 177 VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-LRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254 (297)
T ss_dssp CSCGGGCCHHHHH-CSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHS
T ss_pred cCCcCccChhhhc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCCCCCCCccccCHHHHHHHHHHc
Confidence 6899999999987 56789999999999999999999999975311 112222222222223345667788999999999
Q ss_pred cCCCCCCCCHHHHHH
Q 005999 631 LKSPEQRPAMWQVLK 645 (665)
Q Consensus 631 ~~dP~~RPt~~evl~ 645 (665)
+.||++|||+.|+++
T Consensus 255 ~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 255 EMDVEKRGSAKELLQ 269 (297)
T ss_dssp CSSTTTSCCHHHHTT
T ss_pred cCChhHCcCHHHHhh
Confidence 999999999999986
No 28
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.1e-41 Score=348.87 Aligned_cols=251 Identities=24% Similarity=0.415 Sum_probs=203.7
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCCH
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 474 (665)
+.||+|+||.||+|...+ .+++|.++.........+.+.+|++++++++||||+++++++. .+..++||||+.+|+|
T Consensus 42 ~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L 118 (307)
T 3lb7_A 42 TRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSL 118 (307)
T ss_dssp EEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBH
T ss_pred eEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCCcH
Confidence 679999999999998654 4888888766555566788999999999999999999999875 4558899999999999
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCC-----CCCC
Q 005999 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDS-----SSVE 549 (665)
Q Consensus 475 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~-----~~~~ 549 (665)
.+++.. ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++..... ....
T Consensus 119 ~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~ 193 (307)
T 3lb7_A 119 YKHLHV----QETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193 (307)
T ss_dssp HHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCSSSEEECTTSCEEECCCCSSCC------------
T ss_pred HHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHhCC-EeeCCCChhhEEEcCCCCEEEccCCCceecccccccccccC
Confidence 999974 2456999999999999999999999999 99999999999999999999999999975432 1123
Q ss_pred CCCCCcccCCcccc--CCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC---CchhhhHHHHHH
Q 005999 550 DPDTVAYKAPEIRK--SSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD---GREENRLGMLTE 624 (665)
Q Consensus 550 ~~gt~~y~aPE~~~--~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~ 624 (665)
..||+.|+|||++. .+..++.++|||||||++|||++|+.||..... ...+...+....... .....++..+.+
T Consensus 194 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 272 (307)
T 3lb7_A 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-RDQIIFMVGRGYASPDLSKLYKNCPKAMKR 272 (307)
T ss_dssp CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-HHHHHHHHHHTCCCCCSTTSCSSSCHHHHH
T ss_pred CCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc-HHHHHHHHhcCCCCcchhhhhcCCcHHHHH
Confidence 36899999999875 245688899999999999999999999976321 112222232222221 123456788999
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 625 VASVCSLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 625 li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
++.+||+.||++||++.|+++.|+.+....
T Consensus 273 li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 273 LVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp HHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred HHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 999999999999999999999999987654
No 29
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.5e-41 Score=354.73 Aligned_cols=249 Identities=25% Similarity=0.366 Sum_probs=200.1
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCC----eEEEEEEecC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKG----ERLVIYDYQP 470 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv~e~~~ 470 (665)
+.||+|+||+||+|... ++.||||++.... .....+++|+.++++++||||+++++++.... ..++||||++
T Consensus 30 ~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~ 105 (322)
T 3soc_A 30 EVKARGRFGCVWKAQLL-NEYVAVKIFPIQD---KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHE 105 (322)
T ss_dssp EEEECSTTCEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred heecccCceEEEEEEEC-CCEEEEEEeecCc---hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCC
Confidence 67999999999999876 6789999996543 33455667999999999999999999998754 4699999999
Q ss_pred CCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC----------CCeeccCCCCCceEeCCCCceEEeecccc
Q 005999 471 NGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA----------SWLIHGNLKSSNVLLGADFEARLTDYCLS 540 (665)
Q Consensus 471 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~----------~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~ 540 (665)
+|+|.++++. ..+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||++
T Consensus 106 ~g~L~~~l~~------~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 106 KGSLSDFLKA------NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp TCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-EEeCCCChHhEEECCCCeEEEccCCcc
Confidence 9999999974 3489999999999999999999998 8 999999999999999999999999999
Q ss_pred cccCCCC-----CCCCCCCcccCCccccCC----CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc-----------c
Q 005999 541 VLSDSSS-----VEDPDTVAYKAPEIRKSS----RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP-----------D 600 (665)
Q Consensus 541 ~~~~~~~-----~~~~gt~~y~aPE~~~~~----~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~-----------~ 600 (665)
....... ....||+.|+|||++... ..++.++|||||||++|||+||+.||........ .
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 7654322 224589999999998742 3456688999999999999999999976432211 1
Q ss_pred HHHHHHhhccCC---C-----chhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 601 MLEWVRTMRVDD---G-----REENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 601 ~~~~~~~~~~~~---~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
...+........ . .....+..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 259 LEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred hhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 112221111111 1 12234567999999999999999999999999999997653
No 30
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=5.3e-41 Score=343.64 Aligned_cols=247 Identities=22% Similarity=0.352 Sum_probs=205.9
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCCH
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 474 (665)
+.||+|+||.||++...++..||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+.+|+|
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 106 (283)
T 3gen_A 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 106 (283)
T ss_dssp EECC---CEEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBH
T ss_pred hhcCCCCCceEEEEEEcCCCeEEEEEecCCCC---CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcH
Confidence 67999999999999999999999999976543 346688999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC----CCCC
Q 005999 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS----SVED 550 (665)
Q Consensus 475 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~----~~~~ 550 (665)
.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ....
T Consensus 107 ~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 181 (283)
T 3gen_A 107 LNYLREM----RHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 181 (283)
T ss_dssp HHHHHCG----GGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTST
T ss_pred HHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCccceEEEcCCCCEEEccccccccccccccccccCC
Confidence 9999742 345899999999999999999999999 999999999999999999999999999765432 2233
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
.+|+.|+|||++. +..++.++||||||+++|||++ |+.||.... ..+....+.... ....+...+..+.+++.+|
T Consensus 182 ~~~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~ 257 (283)
T 3gen_A 182 KFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT--NSETAEHIAQGL-RLYRPHLASEKVYTIMYSC 257 (283)
T ss_dssp TSCGGGCCHHHHH-HCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC--HHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHT
T ss_pred ccCcccCCHHHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCccccC--hhHHHHHHhccc-CCCCCCcCCHHHHHHHHHH
Confidence 4678899999987 5678999999999999999998 999997532 223333332221 1123445567899999999
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHhh
Q 005999 630 SLKSPEQRPAMWQVLKMIQEIKES 653 (665)
Q Consensus 630 l~~dP~~RPt~~evl~~L~~~~~~ 653 (665)
|+.||++|||+.|+++.|+++.++
T Consensus 258 l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 258 WHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccCChhHCcCHHHHHHHHHHHhhc
Confidence 999999999999999999998764
No 31
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1e-41 Score=356.40 Aligned_cols=264 Identities=32% Similarity=0.578 Sum_probs=213.7
Q ss_pred cccCHHHHHHHH-----HhHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEE
Q 005999 382 EVYSLEQLMRAS-----AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF 456 (665)
Q Consensus 382 ~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 456 (665)
..+++.++.... .+.||+|+||.||+|...++..||||++...... .....+.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 345555554433 3679999999999999888999999999765432 2223588999999999999999999999
Q ss_pred EeCCeEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCeeccCCCCCceEeCCCCceE
Q 005999 457 QAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA---SWLIHGNLKSSNVLLGADFEAR 533 (665)
Q Consensus 457 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~---~~iiH~Dlk~~Nill~~~~~~k 533 (665)
.+.+..++||||+.+|+|.+++..... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+|
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPK-IIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC-EECCCCSGGGEEECTTCCEE
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEeCCCchhhEEECCCCCEE
Confidence 999999999999999999999985432 345699999999999999999999999 8 99999999999999999999
Q ss_pred EeecccccccCCCC----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCC---CCCCccHHHHHH
Q 005999 534 LTDYCLSVLSDSSS----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP---YLAPPDMLEWVR 606 (665)
Q Consensus 534 l~Dfgl~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~---~~~~~~~~~~~~ 606 (665)
|+|||++....... ....||+.|+|||++. +..++.++|||||||++|||++|+.||+.. .........++.
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS-TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHH-HSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhc-cCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 99999997664322 2234899999999987 566899999999999999999999999621 122334555554
Q ss_pred hhccCC------------CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 005999 607 TMRVDD------------GREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQE 649 (665)
Q Consensus 607 ~~~~~~------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 649 (665)
...... ......+..+.+++.+||+.||++|||+.|+++.|+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 333222 1244566789999999999999999999999999985
No 32
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.1e-40 Score=347.89 Aligned_cols=240 Identities=21% Similarity=0.323 Sum_probs=202.0
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++++++||||+++++++...+..++||||+++|+
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 128 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCB
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCC
Confidence 36999999999999976 789999999976543 345678899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC---CCCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS---SVED 550 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~---~~~~ 550 (665)
|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ....
T Consensus 129 L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 201 (321)
T 2c30_A 129 LTDIVSQ------VRLNEEQIATVCEAVLQALAYLHAQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL 201 (321)
T ss_dssp HHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred HHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccc
Confidence 9999863 35899999999999999999999999 999999999999999999999999998765432 2334
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccC-CCchhhhHHHHHHHHHHc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVD-DGREENRLGMLTEVASVC 629 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~c 629 (665)
.||+.|+|||++. +..++.++|||||||++|||++|+.||... ...+....+...... .......+..+.+++.+|
T Consensus 202 ~gt~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 278 (321)
T 2c30_A 202 VGTPYWMAPEVIS-RSLYATEVDIWSLGIMVIEMVDGEPPYFSD--SPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERM 278 (321)
T ss_dssp CSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHH
T ss_pred cCCccccCHhhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHH
Confidence 6899999999987 567899999999999999999999999752 122333333322221 123345667899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 005999 630 SLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 630 l~~dP~~RPt~~evl~~ 646 (665)
|+.||++|||+.|+++.
T Consensus 279 l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 279 LVRDPQERATAQELLDH 295 (321)
T ss_dssp SCSSTTTSCCHHHHHTS
T ss_pred ccCChhhCcCHHHHhcC
Confidence 99999999999999873
No 33
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4.2e-41 Score=345.16 Aligned_cols=250 Identities=24% Similarity=0.444 Sum_probs=206.8
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHH-----HHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSA-----EAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~-----~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 468 (665)
+.||+|+||.||+|.. .+++.||+|++.......... +.+.+|++++++++||||+++++++.+.. ++||||
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~ 102 (287)
T 4f0f_A 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEF 102 (287)
T ss_dssp EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEEC
T ss_pred hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEe
Confidence 5799999999999996 478899999986554322221 67899999999999999999999997665 699999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC-eeccCCCCCceEeCCCCc-----eEEeecccccc
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW-LIHGNLKSSNVLLGADFE-----ARLTDYCLSVL 542 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~-iiH~Dlk~~Nill~~~~~-----~kl~Dfgl~~~ 542 (665)
+++|+|.+++.. ....+++..++.++.|++.||+|||+.++ |+||||||+||+++.++. +||+|||++..
T Consensus 103 ~~~~~L~~~l~~----~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~ 178 (287)
T 4f0f_A 103 VPCGDLYHRLLD----KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ 178 (287)
T ss_dssp CTTCBHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBC
T ss_pred cCCCCHHHHHhc----ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccc
Confidence 999999998874 34569999999999999999999999763 999999999999988776 99999999987
Q ss_pred cCCCCCCCCCCCcccCCccccC-CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHH
Q 005999 543 SDSSSVEDPDTVAYKAPEIRKS-SRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM 621 (665)
Q Consensus 543 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (665)
.........+|+.|+|||++.. ...++.++|||||||++|||++|+.||.............+.........+...+..
T Consensus 179 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (287)
T 4f0f_A 179 SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPR 258 (287)
T ss_dssp CSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHH
T ss_pred ccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHH
Confidence 6665555679999999999842 345788999999999999999999999864333333344444333333445667788
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 005999 622 LTEVASVCSLKSPEQRPAMWQVLKMIQEI 650 (665)
Q Consensus 622 l~~li~~cl~~dP~~RPt~~evl~~L~~~ 650 (665)
+.+++.+||+.||++|||+.|+++.|+++
T Consensus 259 l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 259 LRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 99999999999999999999999999753
No 34
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.7e-41 Score=344.42 Aligned_cols=247 Identities=26% Similarity=0.396 Sum_probs=206.5
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCCH
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 474 (665)
+.||+|+||.||+|...++..||+|++..... ..+.+.+|++++.+++||||+++++++.+++..++||||+++++|
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 90 (268)
T 3sxs_A 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM---SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCL 90 (268)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECBTTB---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBH
T ss_pred eeeccCCCceEEEEEecCceeEEEEEeccCCC---cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcH
Confidence 57999999999999999998999999976542 346688999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC----CCC
Q 005999 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS----VED 550 (665)
Q Consensus 475 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~----~~~ 550 (665)
.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ...
T Consensus 91 ~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 165 (268)
T 3sxs_A 91 LNYLRSH----GKGLEPSQLLEMCYDVCEGMAFLESHQ-FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGT 165 (268)
T ss_dssp HHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSC
T ss_pred HHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCC
Confidence 9999752 345899999999999999999999999 9999999999999999999999999997654432 223
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
.+|+.|+|||.+. +..++.++||||||+++|||++ |+.||.... ..+....+.... ....+...+..+.+++.+|
T Consensus 166 ~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~ 241 (268)
T 3sxs_A 166 KFPVKWSAPEVFH-YFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT--NSEVVLKVSQGH-RLYRPHLASDTIYQIMYSC 241 (268)
T ss_dssp CCCGGGCCHHHHH-HSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC--HHHHHHHHHTTC-CCCCCTTSCHHHHHHHHHT
T ss_pred CcCcccCCHHHHh-ccCCchhhhhHHHHHHHHHHHcCCCCCccccC--hHHHHHHHHcCC-CCCCCCcChHHHHHHHHHH
Confidence 4577899999987 5678999999999999999999 999997531 122222222211 1123444567899999999
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHhh
Q 005999 630 SLKSPEQRPAMWQVLKMIQEIKES 653 (665)
Q Consensus 630 l~~dP~~RPt~~evl~~L~~~~~~ 653 (665)
|+.||++|||+.|+++.|+.+.+.
T Consensus 242 l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 242 WHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp TCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred cCCChhhCcCHHHHHHHHHHhhhc
Confidence 999999999999999999887654
No 35
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=7.1e-41 Score=347.78 Aligned_cols=244 Identities=18% Similarity=0.275 Sum_probs=197.5
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCCH
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 474 (665)
+.||+|+||+||+|...+++.||+|++..........+.+.+|++++++++||||+++++++.+++..++||||+.+ +|
T Consensus 27 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l 105 (311)
T 3niz_A 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DL 105 (311)
T ss_dssp EEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-EH
T ss_pred hhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-CH
Confidence 57999999999999998899999999976655445567788999999999999999999999999999999999985 88
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC---CCCCC
Q 005999 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS---SVEDP 551 (665)
Q Consensus 475 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~---~~~~~ 551 (665)
.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++...... .....
T Consensus 106 ~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 180 (311)
T 3niz_A 106 KKVLDEN----KTGLQDSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV 180 (311)
T ss_dssp HHHHHTC----TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCC
T ss_pred HHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCc
Confidence 8888742 345899999999999999999999999 999999999999999999999999999766432 23346
Q ss_pred CCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC------------------
Q 005999 552 DTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG------------------ 613 (665)
Q Consensus 552 gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~------------------ 613 (665)
+|+.|+|||++.+...++.++||||+||++|||++|+.||...... ..+............
T Consensus 181 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (311)
T 3niz_A 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD-DQLPKIFSILGTPNPREWPQVQELPLWKQRTFQ 259 (311)
T ss_dssp CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT-THHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCC
T ss_pred ccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHHCCCChHHhhhhhccchhhhcccc
Confidence 8999999999875567899999999999999999999999764322 122222221111100
Q ss_pred ---------chhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 614 ---------REENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 614 ---------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.....+..+.+|+.+||+.||++|||+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 260 VFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 01223467889999999999999999999986
No 36
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=356.03 Aligned_cols=241 Identities=20% Similarity=0.304 Sum_probs=195.1
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||+||+|.. .+++.||||++...... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 16 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~ 94 (347)
T 3zgw_A 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGE 94 (347)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCB
T ss_pred EEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCC
Confidence 6799999999999996 57889999999765432 234568899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC----CC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS----VE 549 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~----~~ 549 (665)
|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++....... ..
T Consensus 95 L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~ 168 (347)
T 3zgw_A 95 LFDYIIS-----QDRLSEEETRVVFRQIVSAVAYVHSQG-YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT 168 (347)
T ss_dssp HHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBC-----------
T ss_pred HHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCccccc
Confidence 9999874 345899999999999999999999999 9999999999999999999999999987654322 23
Q ss_pred CCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 550 DPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
..||+.|+|||++.+...++.++||||+||++|||++|+.||... ....+...+.... ...+...+..+.+++.+|
T Consensus 169 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~~ 244 (347)
T 3zgw_A 169 CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD--NVMALYKKIMRGK--YDVPKWLSPSSILLLQQM 244 (347)
T ss_dssp ---CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTC--CCCCTTCCHHHHHHHHHH
T ss_pred cCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHH
Confidence 458999999999874444589999999999999999999999752 1223333333222 223445667789999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 005999 630 SLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 630 l~~dP~~RPt~~evl~~ 646 (665)
|+.||++|||+.|+++.
T Consensus 245 L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 245 LQVDPKKRISMKNLLNH 261 (347)
T ss_dssp TCSSGGGSCCHHHHHTC
T ss_pred cccCHhHCcCHHHHhcC
Confidence 99999999999999874
No 37
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=7.5e-41 Score=365.42 Aligned_cols=246 Identities=23% Similarity=0.374 Sum_probs=206.2
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCC-eEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKG-ERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|... +..||||+++... ..+.|.+|++++++++||||+++++++...+ ..++||||+++|+
T Consensus 199 ~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~ 273 (450)
T 1k9a_A 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273 (450)
T ss_dssp EEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCB
T ss_pred eeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCc
Confidence 67999999999999986 5689999997643 3467899999999999999999999987765 7899999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCCCCCCCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSVEDPDT 553 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~gt 553 (665)
|.+++... ....+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++...........++
T Consensus 274 L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 349 (450)
T 1k9a_A 274 LVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 349 (450)
T ss_dssp HHHHHHHH---CTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTSCEEECCCTTCEECC------CCC
T ss_pred HHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCC
Confidence 99999853 2234789999999999999999999999 9999999999999999999999999998665544444678
Q ss_pred CcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHcccC
Q 005999 554 VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSLK 632 (665)
Q Consensus 554 ~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 632 (665)
..|+|||++. +..++.++|||||||++|||++ |+.||.... ..++...+.... ....+..++..+.+++.+||+.
T Consensus 350 ~~y~aPE~~~-~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~--~~~~~~~i~~~~-~~~~p~~~~~~l~~li~~cl~~ 425 (450)
T 1k9a_A 350 VKWTAPEALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPRVEKGY-KMDAPDGCPPAVYDVMKNCWHL 425 (450)
T ss_dssp TTTSCHHHHH-SSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC--TTTHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCS
T ss_pred cceeCHHHhc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCC-CCCCCCcCCHHHHHHHHHHcCC
Confidence 8999999987 6779999999999999999998 999997632 234444443322 1234456778899999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhh
Q 005999 633 SPEQRPAMWQVLKMIQEIKES 653 (665)
Q Consensus 633 dP~~RPt~~evl~~L~~~~~~ 653 (665)
||++|||+.|+++.|+.+...
T Consensus 426 dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 426 DAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp SGGGSCCHHHHHHHHHHHHHT
T ss_pred ChhHCcCHHHHHHHHHHHHHh
Confidence 999999999999999998764
No 38
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.7e-41 Score=362.14 Aligned_cols=250 Identities=23% Similarity=0.365 Sum_probs=208.7
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
.+.||+|+||.||+|... ++..||||+++.... ....+.+.+|++++++++||||+++++++..++..++||||+++|
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP-PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSC-HHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 367999999999999976 788999999875532 334567889999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCCC----
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSV---- 548 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~---- 548 (665)
+|.++++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 198 ~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~ 272 (377)
T 3cbl_A 198 DFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272 (377)
T ss_dssp BHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCS
T ss_pred CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecC
Confidence 999999742 345899999999999999999999999 99999999999999999999999999976543221
Q ss_pred -CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHH
Q 005999 549 -EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVA 626 (665)
Q Consensus 549 -~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 626 (665)
...+++.|+|||++. ...++.++|||||||++|||++ |+.||... ...+....+.... ....+..++..+.+++
T Consensus 273 ~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~il~el~t~g~~p~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~l~~li 348 (377)
T 3cbl_A 273 GLRQVPVKWTAPEALN-YGRYSSESDVWSFGILLWETFSLGASPYPNL--SNQQTREFVEKGG-RLPCPELCPDAVFRLM 348 (377)
T ss_dssp SCCEEEGGGSCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS--CHHHHHHHHHTTC-CCCCCTTCCHHHHHHH
T ss_pred CCCCCCcCcCCHhHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCC-CCCCCCCCCHHHHHHH
Confidence 112467799999987 5678999999999999999998 99998753 2223333333322 1223455678899999
Q ss_pred HHcccCCCCCCCCHHHHHHHHHHHHhh
Q 005999 627 SVCSLKSPEQRPAMWQVLKMIQEIKES 653 (665)
Q Consensus 627 ~~cl~~dP~~RPt~~evl~~L~~~~~~ 653 (665)
.+||+.||++|||+.++++.|+++.+.
T Consensus 349 ~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 349 EQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 999999999999999999999998764
No 39
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=5.2e-41 Score=340.98 Aligned_cols=250 Identities=20% Similarity=0.317 Sum_probs=205.6
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeC--CeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAK--GERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|..+ +..||+|++..........+.+.+|+.++++++||||+++++++.+. +..++||||+++|
T Consensus 16 ~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~ 94 (271)
T 3kmu_A 16 TKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYG 94 (271)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTC
T ss_pred HHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCC
Confidence 57999999999999986 67899999987765556677899999999999999999999999887 7889999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CeeccCCCCCceEeCCCCceEEeecccccccCCCCCCCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS-WLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSVEDP 551 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~-~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 551 (665)
+|.+++... ....+++..++.++.||+.||+|||+.+ +|+||||||+||+++.++.++|+|||++..... ....
T Consensus 95 ~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~--~~~~ 169 (271)
T 3kmu_A 95 SLYNVLHEG---TNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS--PGRM 169 (271)
T ss_dssp BHHHHHHSC---SSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC--TTCB
T ss_pred cHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecc--cCcc
Confidence 999999853 2336899999999999999999999864 489999999999999999999999988755332 2346
Q ss_pred CCCcccCCccccCCC--CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 552 DTVAYKAPEIRKSSR--RATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 552 gt~~y~aPE~~~~~~--~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
+|+.|+|||.+.... .++.++||||||+++|||++|+.||.... ..+....+.........+...+..+.+++.+|
T Consensus 170 ~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 247 (271)
T 3kmu_A 170 YAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS--NMEIGMKVALEGLRPTIPPGISPHVSKLMKIC 247 (271)
T ss_dssp SCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC--HHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHH
T ss_pred CCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC--hHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence 899999999987321 23338999999999999999999997531 12222222222222234456778899999999
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHh
Q 005999 630 SLKSPEQRPAMWQVLKMIQEIKE 652 (665)
Q Consensus 630 l~~dP~~RPt~~evl~~L~~~~~ 652 (665)
|+.||++|||+.|+++.|+++.+
T Consensus 248 l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 248 MNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHCC
T ss_pred cCCChhhCcCHHHHHHHHHHhhc
Confidence 99999999999999999998864
No 40
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=9e-41 Score=353.52 Aligned_cols=242 Identities=19% Similarity=0.303 Sum_probs=202.4
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchh----hHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEec
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTAD----TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQ 469 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 469 (665)
+.||+|+||.||+|... ++..||+|.+....... ...+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 18 ~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 97 (361)
T 2yab_A 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELV 97 (361)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred eEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcC
Confidence 57999999999999965 68899999997654321 23567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCC----ceEEeecccccccCC
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADF----EARLTDYCLSVLSDS 545 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~----~~kl~Dfgl~~~~~~ 545 (665)
++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++ .+||+|||++.....
T Consensus 98 ~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~ 171 (361)
T 2yab_A 98 SGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171 (361)
T ss_dssp CSCBHHHHHTT-----CSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCT
T ss_pred CCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCC
Confidence 99999999973 356999999999999999999999999 99999999999998876 799999999977654
Q ss_pred CC--CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC--chhhhHHH
Q 005999 546 SS--VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG--REENRLGM 621 (665)
Q Consensus 546 ~~--~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 621 (665)
.. ....||+.|+|||++. +..++.++|||||||++|||++|+.||... ...+....+........ .....+..
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~~ll~g~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~ 248 (361)
T 2yab_A 172 GVEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANITAVSYDFDEEFFSQTSEL 248 (361)
T ss_dssp TCCCCCCCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTTCCCCCHHHHTTSCHH
T ss_pred CCccccCCCCccEECchHHc-CCCCCccccHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhcCCCCCchhccCCCHH
Confidence 32 3346899999999987 567899999999999999999999999752 22233333332222211 22355678
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 005999 622 LTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 622 l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
+.+|+.+||..||++|||+.|+++
T Consensus 249 ~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 249 AKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHCCCChhHCcCHHHHhc
Confidence 999999999999999999999985
No 41
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=356.46 Aligned_cols=259 Identities=24% Similarity=0.343 Sum_probs=213.7
Q ss_pred hHhCcccceEEEEEEE--------CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEE
Q 005999 395 ELLGRGSIGTTYKAVL--------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVI 465 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 465 (665)
+.||+|+||.||+|.. ..+..||+|++..... ....+.+.+|+++++++ +||||+++++++..++..++|
T Consensus 75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 153 (382)
T 3tt0_A 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 153 (382)
T ss_dssp EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC-HHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEE
Confidence 6799999999999985 3457899999976543 34557789999999999 999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEE
Q 005999 466 YDYQPNGSLFNLIHGSRS-----------IRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARL 534 (665)
Q Consensus 466 ~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl 534 (665)
|||+++|+|.+++..... .....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||
T Consensus 154 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL 232 (382)
T 3tt0_A 154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDNVMKI 232 (382)
T ss_dssp EECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEE
T ss_pred EEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCcceEEEcCCCcEEE
Confidence 999999999999986431 11346999999999999999999999999 999999999999999999999
Q ss_pred eecccccccCCCC-----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhh
Q 005999 535 TDYCLSVLSDSSS-----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTM 608 (665)
Q Consensus 535 ~Dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~ 608 (665)
+|||++....... ....+|+.|+|||++. +..++.++|||||||++|||++ |+.||... ...++...+...
T Consensus 233 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~DiwslG~il~ellt~g~~p~~~~--~~~~~~~~~~~~ 309 (382)
T 3tt0_A 233 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFKLLKEG 309 (382)
T ss_dssp CSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHH-SCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHTT
T ss_pred cccCcccccccccccccccCCCCCcceeCHHHhc-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcC
Confidence 9999997664322 2234678899999987 6779999999999999999999 99998753 222333333332
Q ss_pred ccCCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcccCc
Q 005999 609 RVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDN 659 (665)
Q Consensus 609 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~ 659 (665)
.. ...+...+..+.+++.+||+.||++|||+.|+++.|+.+.......+.
T Consensus 310 ~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~ 359 (382)
T 3tt0_A 310 HR-MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEM 359 (382)
T ss_dssp CC-CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC-
T ss_pred CC-CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCC
Confidence 21 223455677899999999999999999999999999999887655443
No 42
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.6e-41 Score=358.83 Aligned_cols=250 Identities=19% Similarity=0.383 Sum_probs=199.6
Q ss_pred hHhCcccceEEEEEEEC----CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecC
Q 005999 395 ELLGRGSIGTTYKAVLD----NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQP 470 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 470 (665)
+.||+|+||.||+|... ++..||||+++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 51 ~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 129 (373)
T 2qol_A 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129 (373)
T ss_dssp EEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred eEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCC
Confidence 67999999999999864 577899999976543 3456789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCCC--
Q 005999 471 NGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSV-- 548 (665)
Q Consensus 471 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~-- 548 (665)
+|+|.++++. ....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 130 ~~sL~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 204 (373)
T 2qol_A 130 NGSLDSFLRK----HDAQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA 204 (373)
T ss_dssp TCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred CCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEEcCCCCEEECcCccccccccCCccc
Confidence 9999999974 2346899999999999999999999999 99999999999999999999999999976643221
Q ss_pred ----CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHH
Q 005999 549 ----EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLT 623 (665)
Q Consensus 549 ----~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 623 (665)
...+++.|+|||++. +..++.++|||||||++|||++ |+.||... ...++...+..... .......+..+.
T Consensus 205 ~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~--~~~~~~~~i~~~~~-~~~~~~~~~~l~ 280 (373)
T 2qol_A 205 YTTRGGKIPIRWTSPEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEM--SNQDVIKAVDEGYR-LPPPMDCPAALY 280 (373)
T ss_dssp ---------CTTSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC--CHHHHHHHHHTTEE-CCCCTTCBHHHH
T ss_pred eeccCCCcCCCccChhhhc-cCCcCchhcHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC-CCCCccccHHHH
Confidence 112467899999987 5679999999999999999998 99999753 22233333332221 123445677899
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 624 EVASVCSLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 624 ~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
+++.+||+.||++||++.|+++.|+.+....
T Consensus 281 ~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 281 QLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred HHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999997654
No 43
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=4.9e-41 Score=356.31 Aligned_cols=244 Identities=22% Similarity=0.323 Sum_probs=205.1
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
.+.||+|+||.||+|... ++..||+|++..........+.+.+|++++++++||||+++++++.+++..++||||+.+|
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg 113 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 113 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 467999999999999965 6889999999876555556678999999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCC---CceEEeecccccccCCCC--
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD---FEARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~---~~~kl~Dfgl~~~~~~~~-- 547 (665)
+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||++.......
T Consensus 114 ~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~ 187 (362)
T 2bdw_A 114 ELFEDIVA-----REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 187 (362)
T ss_dssp BHHHHHTT-----CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSC
T ss_pred CHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCccc
Confidence 99999873 346899999999999999999999999 9999999999999865 459999999997765433
Q ss_pred CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC--CchhhhHHHHHHH
Q 005999 548 VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD--GREENRLGMLTEV 625 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l 625 (665)
....||+.|+|||++. +..++.++|||||||++|||++|+.||... ....+...+....... ......+..+.++
T Consensus 188 ~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 264 (362)
T 2bdw_A 188 HGFAGTPGYLSPEVLK-KDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL 264 (362)
T ss_dssp CCSCSCTTTCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCTTGGGGSCHHHHHH
T ss_pred ccCCCCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCCcccccCCCHHHHHH
Confidence 2346899999999987 567899999999999999999999999752 2223333333332222 2234567789999
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 005999 626 ASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 626 i~~cl~~dP~~RPt~~evl~~ 646 (665)
+.+||+.||++|||+.|+++.
T Consensus 265 i~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 265 IDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHcCCChhhCcCHHHHhcC
Confidence 999999999999999999864
No 44
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=362.32 Aligned_cols=243 Identities=20% Similarity=0.281 Sum_probs=204.3
Q ss_pred HhHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 394 AELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
.+.||+|+||+||+|.. .+++.+|+|++..........+.+.+|++++++++||||+++++++.+++..++||||+.+|
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg 95 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 95 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCC
Confidence 46799999999999985 47889999999877665566778999999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeC---CCCceEEeecccccccCCCC--
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLG---ADFEARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~---~~~~~kl~Dfgl~~~~~~~~-- 547 (665)
+|.+.+.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++ .++.+||+|||++.......
T Consensus 96 ~L~~~i~~-----~~~~~e~~~~~i~~qil~aL~~lH~~g-ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~ 169 (444)
T 3soa_A 96 ELFEDIVA-----REYYSEADASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA 169 (444)
T ss_dssp BHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCB
T ss_pred CHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCce
Confidence 99999874 345899999999999999999999999 99999999999998 46789999999997665432
Q ss_pred -CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC--CchhhhHHHHHH
Q 005999 548 -VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD--GREENRLGMLTE 624 (665)
Q Consensus 548 -~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 624 (665)
....||+.|+|||++. +..++.++||||+||++|+|++|+.||... ....+...+....... ......+..+.+
T Consensus 170 ~~~~~gt~~Y~APE~l~-~~~~~~~~DIwSlGvilyell~G~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 246 (444)
T 3soa_A 170 WFGFAGTPGYLSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPFWDE--DQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 246 (444)
T ss_dssp CCCSCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHTCCCCCTTTTTTSCHHHHH
T ss_pred eecccCCcccCCHHHhc-CCCCCCccccHHHHHHHHHHHhCCCCCCCc--cHHHHHHHHHhCCCCCCccccccCCHHHHH
Confidence 2346899999999987 567899999999999999999999999652 2224444444333222 122456778999
Q ss_pred HHHHcccCCCCCCCCHHHHHH
Q 005999 625 VASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 625 li~~cl~~dP~~RPt~~evl~ 645 (665)
++.+||+.||++|||+.|+++
T Consensus 247 li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 247 LINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp HHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHcCCChhHCCCHHHHhc
Confidence 999999999999999999987
No 45
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.9e-40 Score=342.37 Aligned_cols=265 Identities=29% Similarity=0.496 Sum_probs=213.5
Q ss_pred cccCHHHHHHHHH-----------hHhCcccceEEEEEEECCeEEEEEEEecCCC--chhhHHHHHHHHHHHHhCCCCCC
Q 005999 382 EVYSLEQLMRASA-----------ELLGRGSIGTTYKAVLDNHLIVTVKRFDANK--TADTSAEAFEQHMEAVGGLSHPN 448 (665)
Q Consensus 382 ~~~~~~~~~~~~~-----------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~n 448 (665)
..|++.++..++. +.||+|+||.||+|.. ++..||+|++.... ......+.+.+|+.++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 4566777766652 5699999999999986 56789999986543 22345678999999999999999
Q ss_pred eeeeeEEEEeCCeEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCC
Q 005999 449 LVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA 528 (665)
Q Consensus 449 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~ 528 (665)
|+++++++.+.+..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLHENH-HIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEcC
Confidence 9999999999999999999999999999997432 2356899999999999999999999999 999999999999999
Q ss_pred CCceEEeecccccccCCCC-----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc--cH
Q 005999 529 DFEARLTDYCLSVLSDSSS-----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP--DM 601 (665)
Q Consensus 529 ~~~~kl~Dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~--~~ 601 (665)
++.+||+|||++....... ....||+.|+|||.+. +.++.++||||||+++|||++|+.||........ .+
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 246 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR--GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT--TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhc--CCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHH
Confidence 9999999999987654422 2235899999999886 3588999999999999999999999976432211 12
Q ss_pred HHHHHhhc-------c--CCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHh
Q 005999 602 LEWVRTMR-------V--DDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKE 652 (665)
Q Consensus 602 ~~~~~~~~-------~--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 652 (665)
...+.... . ........+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 247 KEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 11111100 0 011234566789999999999999999999999999998854
No 46
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.7e-40 Score=342.43 Aligned_cols=257 Identities=15% Similarity=0.176 Sum_probs=210.3
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|.. .+++.||+|++..... .+.+.+|+++++++ +|+|++++++++.+....++||||+ ++
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~ 90 (298)
T 1csn_A 16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GP 90 (298)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CC
Confidence 5799999999999995 5789999999865432 23467889999999 8999999999999999999999999 99
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCc-----eEEeecccccccCCCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFE-----ARLTDYCLSVLSDSSS 547 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~-----~kl~Dfgl~~~~~~~~ 547 (665)
+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||++.......
T Consensus 91 ~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~ 165 (298)
T 1csn_A 91 SLEDLLDLC----GRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 165 (298)
T ss_dssp BHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred CHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence 999999853 345999999999999999999999999 999999999999987776 9999999997654321
Q ss_pred ----------CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc-cHHHHHHhhccCCC---
Q 005999 548 ----------VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP-DMLEWVRTMRVDDG--- 613 (665)
Q Consensus 548 ----------~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~-~~~~~~~~~~~~~~--- 613 (665)
....||+.|+|||++. +..++.++|||||||++|||++|+.||........ .....+........
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (298)
T 1csn_A 166 TKQHIPYREKKNLSGTARYMSINTHL-GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE 244 (298)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH
T ss_pred ccccccccCccCCCCCcccCCchhhc-CCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHH
Confidence 2335899999999987 56789999999999999999999999987432222 22222222111111
Q ss_pred chhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcccCcccC
Q 005999 614 REENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDNAAF 662 (665)
Q Consensus 614 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~~~ 662 (665)
.....+..+.+++.+||+.||++|||+.++++.|+++.+......+..|
T Consensus 245 ~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~ 293 (298)
T 1csn_A 245 LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENF 293 (298)
T ss_dssp HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCC
T ss_pred HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCCcc
Confidence 1235577899999999999999999999999999999998876555444
No 47
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=8.5e-41 Score=344.35 Aligned_cols=252 Identities=20% Similarity=0.382 Sum_probs=201.8
Q ss_pred hHhCcccceEEEEEEE-----CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEe--CCeEEEEEE
Q 005999 395 ELLGRGSIGTTYKAVL-----DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA--KGERLVIYD 467 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e 467 (665)
+.||+|+||+||+|.+ .+++.||||++.... ....+.+.+|++++++++||||+++++++.. ....++|||
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 93 (295)
T 3ugc_A 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93 (295)
T ss_dssp EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEE
T ss_pred heeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEE
Confidence 6799999999999985 368899999997553 3456779999999999999999999999865 356899999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC
Q 005999 468 YQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 547 (665)
|+++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 94 ~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (295)
T 3ugc_A 94 YLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168 (295)
T ss_dssp CCTTCBHHHHHHHC----GGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCSCC------
T ss_pred eCCCCCHHHHHHhc----ccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHhhEEEcCCCeEEEccCcccccccCCc
Confidence 99999999999753 345899999999999999999999999 9999999999999999999999999997664322
Q ss_pred ------CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCC---------CCc-cHH-HHHHhhcc
Q 005999 548 ------VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYL---------APP-DML-EWVRTMRV 610 (665)
Q Consensus 548 ------~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~---------~~~-~~~-~~~~~~~~ 610 (665)
....++..|+|||.+. +..++.++||||||+++|||++|..|+..... ... ... ........
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (295)
T 3ugc_A 169 EFFKVKEPGESPIFWYAPESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247 (295)
T ss_dssp -------CTTCGGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred ceeeeccCCCCccceeCcHHhc-CCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence 1224667799999987 56789999999999999999999999864210 000 111 11111111
Q ss_pred --CCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 611 --DDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 611 --~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
....+...+..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 248 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 248 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 11234566788999999999999999999999999999998764
No 48
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.9e-40 Score=347.59 Aligned_cols=253 Identities=15% Similarity=0.138 Sum_probs=206.6
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|.. .+++.||||++..... .+.+.+|+++++++ +||||+++++++...+..++||||+ ++
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 89 (330)
T 2izr_A 15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GP 89 (330)
T ss_dssp EECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CC
T ss_pred EEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CC
Confidence 6799999999999995 5789999999865432 23478899999999 9999999999999999999999999 99
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCc-----eEEeecccccccCCCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFE-----ARLTDYCLSVLSDSSS 547 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~-----~kl~Dfgl~~~~~~~~ 547 (665)
+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||++.......
T Consensus 90 ~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 90 SLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVHSKN-LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp BHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred CHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 999999853 356999999999999999999999999 999999999999998887 9999999997653322
Q ss_pred ----------CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc-cHHHHHHhhccCCC---
Q 005999 548 ----------VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP-DMLEWVRTMRVDDG--- 613 (665)
Q Consensus 548 ----------~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~-~~~~~~~~~~~~~~--- 613 (665)
....||+.|+|||++. +..++.++|||||||++|||++|+.||........ +....+........
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 243 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHL-GKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEV 243 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHH
T ss_pred CCccccccccCCcCCCccccChHHHc-CCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHH
Confidence 2346899999999987 57789999999999999999999999987432221 22222221111111
Q ss_pred chhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcccCc
Q 005999 614 REENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDN 659 (665)
Q Consensus 614 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~ 659 (665)
.....+ .+.+++..|++.||.+||++.++++.|+++.+......+
T Consensus 244 ~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~ 288 (330)
T 2izr_A 244 LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFD 288 (330)
T ss_dssp HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCS
T ss_pred HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCC
Confidence 112244 899999999999999999999999999999887755433
No 49
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.8e-40 Score=344.77 Aligned_cols=254 Identities=23% Similarity=0.384 Sum_probs=210.9
Q ss_pred HhHhCcccceEEEEEEE------CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEE
Q 005999 394 AELLGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYD 467 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 467 (665)
.+.||+|+||.||+|.. .++..||+|++..... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS-PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEe
Confidence 36799999999999985 3568999999976543 3455778999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCC
Q 005999 468 YQPNGSLFNLIHGSRSI-------------------RAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA 528 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~ 528 (665)
|+++|+|.+++...+.. ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~NIli~~ 185 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-LVHRDLAARNILVAE 185 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEET
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC-CcccccchheEEEcC
Confidence 99999999999864321 1234899999999999999999999999 999999999999999
Q ss_pred CCceEEeecccccccCCCC-----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHH
Q 005999 529 DFEARLTDYCLSVLSDSSS-----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDML 602 (665)
Q Consensus 529 ~~~~kl~Dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~ 602 (665)
++.+||+|||++....... ....+|+.|+|||.+. +..++.++|||||||++|||++ |+.||... ....+.
T Consensus 186 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~t~g~~p~~~~--~~~~~~ 262 (314)
T 2ivs_A 186 GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI--PPERLF 262 (314)
T ss_dssp TTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCSSTTC--CGGGHH
T ss_pred CCCEEEccccccccccccccceeccCCCCcccccChhhhc-CCCcCchhhHHHHHHHHHHHHhCCCCCCCCC--CHHHHH
Confidence 9999999999997654322 2234678899999987 5678999999999999999999 99999763 223444
Q ss_pred HHHHhhccCCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhh
Q 005999 603 EWVRTMRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKES 653 (665)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 653 (665)
..+..... ...+...+..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 263 ~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 263 NLLKTGHR-MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp HHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHhhcCCc-CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 44433221 223456677899999999999999999999999999998764
No 50
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=9.6e-41 Score=342.82 Aligned_cols=244 Identities=18% Similarity=0.282 Sum_probs=198.1
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCCH
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 474 (665)
+.||+|+||.||+|...+++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||||+.+ +|
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l 86 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DL 86 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EH
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CH
Confidence 57999999999999998899999999976654444456788999999999999999999999999999999999986 99
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC---CCCCC
Q 005999 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS---SVEDP 551 (665)
Q Consensus 475 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~---~~~~~ 551 (665)
.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++...... .....
T Consensus 87 ~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 161 (288)
T 1ob3_A 87 KKLLDVC----EGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI 161 (288)
T ss_dssp HHHHHTS----TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred HHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEeECccccccCcccccccccc
Confidence 9998742 356899999999999999999999999 999999999999999999999999999765432 22335
Q ss_pred CCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC-------------------
Q 005999 552 DTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD------------------- 612 (665)
Q Consensus 552 gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~------------------- 612 (665)
+|+.|+|||++.+...++.++|||||||++|||++|+.||..... ...+....+......
T Consensus 162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T 1ob3_A 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE-ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240 (288)
T ss_dssp CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC
T ss_pred ccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHHCCCChhhchhhhccccccccccc
Confidence 899999999987555689999999999999999999999975321 112222221111100
Q ss_pred -------CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 613 -------GREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 613 -------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
......+..+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 001235677899999999999999999999986
No 51
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4.4e-41 Score=351.21 Aligned_cols=244 Identities=20% Similarity=0.283 Sum_probs=200.2
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|... +++.||+|++..... ....+.+.+|+.+++.++||||+++++++.+++..++||||+++|+
T Consensus 13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~ 91 (323)
T 3tki_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (323)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEE
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCc
Confidence 67999999999999965 788999999865433 2334668899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC-----CC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS-----SV 548 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~-----~~ 548 (665)
|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 92 L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 165 (323)
T 3tki_A 92 LFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165 (323)
T ss_dssp GGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred HHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccC
Confidence 9999863 346999999999999999999999999 999999999999999999999999999754321 12
Q ss_pred CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHH
Q 005999 549 EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASV 628 (665)
Q Consensus 549 ~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 628 (665)
...||+.|+|||++.....++.++|||||||++|||++|+.||............+.... .........+..+.+++.+
T Consensus 166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~ 244 (323)
T 3tki_A 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK-TYLNPWKKIDSAPLALLHK 244 (323)
T ss_dssp SCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTC-TTSTTGGGSCHHHHHHHHH
T ss_pred CCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccc-ccCCccccCCHHHHHHHHH
Confidence 346899999999987444457899999999999999999999987543333343333322 1122334567789999999
Q ss_pred cccCCCCCCCCHHHHHHH
Q 005999 629 CSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 629 cl~~dP~~RPt~~evl~~ 646 (665)
||+.||++|||+.|+++.
T Consensus 245 ~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 245 ILVENPSARITIPDIKKD 262 (323)
T ss_dssp HSCSSTTTSCCHHHHTTC
T ss_pred HccCChhhCcCHHHHhhC
Confidence 999999999999999863
No 52
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-40 Score=351.14 Aligned_cols=255 Identities=24% Similarity=0.405 Sum_probs=208.5
Q ss_pred hHhCcccceEEEEEEEC------CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVLD------NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 468 (665)
+.||+|+||.||+|... ++..||+|+++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 131 (343)
T 1luf_A 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEY 131 (343)
T ss_dssp EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEec
Confidence 67999999999999964 468999999976543 34567799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCC
Q 005999 469 QPNGSLFNLIHGSRSI-------------------RAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD 529 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~ 529 (665)
+++|+|.+++...... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.+
T Consensus 132 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~ 210 (343)
T 1luf_A 132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCLVGEN 210 (343)
T ss_dssp CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGG
T ss_pred CCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEECCC
Confidence 9999999999753211 1257999999999999999999999999 9999999999999999
Q ss_pred CceEEeecccccccCCC-----CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHH
Q 005999 530 FEARLTDYCLSVLSDSS-----SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLE 603 (665)
Q Consensus 530 ~~~kl~Dfgl~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~ 603 (665)
+.+||+|||++...... .....+|+.|+|||++. +..++.++||||||+++|||++ |+.||... ...++..
T Consensus 211 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~el~t~g~~p~~~~--~~~~~~~ 287 (343)
T 1luf_A 211 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIFSYGLQPYYGM--AHEEVIY 287 (343)
T ss_dssp GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHH
T ss_pred CeEEEeecCCCcccccCccccccCCCcccceecChhhhc-cCCcCcccccHHHHHHHHHHHhcCCCcCCCC--ChHHHHH
Confidence 99999999998654322 12335788999999987 5679999999999999999999 99999753 2223333
Q ss_pred HHHhhccCCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhc
Q 005999 604 WVRTMRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVM 655 (665)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 655 (665)
.+..... ...+...+..+.+++.+||+.||++|||+.|+++.|+++.+...
T Consensus 288 ~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 288 YVRDGNI-LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp HHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred HHhCCCc-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 3332221 12345667789999999999999999999999999999876543
No 53
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-40 Score=345.85 Aligned_cols=240 Identities=21% Similarity=0.262 Sum_probs=203.5
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|... +++.||+|+++..... ....+.+.+|+.+++.++||||+++++++.+.+..++||||+++|
T Consensus 12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg 91 (318)
T 1fot_A 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGG 91 (318)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCC
Confidence 57999999999999965 6889999999754321 123566789999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCCCCCCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSVEDPD 552 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~g 552 (665)
+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||++...........|
T Consensus 92 ~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~g 165 (318)
T 1fot_A 92 ELFSLLRK-----SQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCG 165 (318)
T ss_dssp BHHHHHHH-----TSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCS
T ss_pred CHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChheEEEcCCCCEEEeecCcceecCCccccccC
Confidence 99999974 346899999999999999999999999 999999999999999999999999999887766666679
Q ss_pred CCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHcccC
Q 005999 553 TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSLK 632 (665)
Q Consensus 553 t~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 632 (665)
|+.|+|||++. +..++.++|||||||++|||++|+.||.... .......+.. .....+...+..+.+++.+||..
T Consensus 166 t~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~i~~--~~~~~p~~~~~~~~~li~~lL~~ 240 (318)
T 1fot_A 166 TPDYIAPEVVS-TKPYNKSIDWWSFGILIYEMLAGYTPFYDSN--TMKTYEKILN--AELRFPPFFNEDVKDLLSRLITR 240 (318)
T ss_dssp CTTTCCHHHHT-TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHH--CCCCCCTTSCHHHHHHHHHHTCS
T ss_pred CccccCHhHhc-CCCCCcccchhhhHHHHHHHHhCCCCCCCCC--HHHHHHHHHh--CCCCCCCCCCHHHHHHHHHHhcc
Confidence 99999999987 6678999999999999999999999997531 1222222222 12223445677899999999999
Q ss_pred CCCCCC-----CHHHHHH
Q 005999 633 SPEQRP-----AMWQVLK 645 (665)
Q Consensus 633 dP~~RP-----t~~evl~ 645 (665)
||++|| ++.|+++
T Consensus 241 dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 241 DLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp CTTTCTTSSTTTTHHHHT
T ss_pred CHHHcCCCcCCCHHHHhc
Confidence 999999 8888875
No 54
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.3e-41 Score=348.34 Aligned_cols=241 Identities=16% Similarity=0.240 Sum_probs=201.5
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||++... ++..||+|.+.... ...+.+.+|+++++.++||||+++++++.+.+..++||||+++|+
T Consensus 11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~ 87 (321)
T 1tki_A 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLD 87 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCB
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEEecCc---ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCC
Confidence 57999999999999965 68899999987543 445678899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCC--CCceEEeecccccccCCCC--CC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA--DFEARLTDYCLSVLSDSSS--VE 549 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~--~~~~kl~Dfgl~~~~~~~~--~~ 549 (665)
|.+++.. ....+++..++.++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||++....... ..
T Consensus 88 L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~g-ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 162 (321)
T 1tki_A 88 IFERINT----SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL 162 (321)
T ss_dssp HHHHHTS----SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEE
T ss_pred HHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcccc
Confidence 9999974 2346899999999999999999999999 999999999999997 7899999999997765432 22
Q ss_pred CCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC--chhhhHHHHHHHHH
Q 005999 550 DPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG--REENRLGMLTEVAS 627 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~ 627 (665)
..+|+.|+|||++. +..++.++|||||||++|||++|+.||... ...+....+........ .....+..+.+++.
T Consensus 163 ~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 239 (321)
T 1tki_A 163 LFTAPEYYAPEVHQ-HDVVSTATDMWSLGTLVYVLLSGINPFLAE--TNQQIIENIMNAEYTFDEEAFKEISIEAMDFVD 239 (321)
T ss_dssp EESCGGGSCHHHHT-TCEECHHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHH
T ss_pred ccCChhhcCcHHhc-CCCCCchhhHHHHHHHHHHHHhCCCCCcCC--CHHHHHHHHHcCCCCCChhhhccCCHHHHHHHH
Confidence 35899999999987 566899999999999999999999999763 22233333332222211 12355778999999
Q ss_pred HcccCCCCCCCCHHHHHHH
Q 005999 628 VCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 628 ~cl~~dP~~RPt~~evl~~ 646 (665)
+||..||++|||+.|+++.
T Consensus 240 ~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 240 RLLVKERKSRMTASEALQH 258 (321)
T ss_dssp TTSCSSGGGSCCHHHHHHS
T ss_pred HHcCCChhHCcCHHHHhcC
Confidence 9999999999999999883
No 55
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.2e-40 Score=347.99 Aligned_cols=257 Identities=22% Similarity=0.334 Sum_probs=197.2
Q ss_pred HhHhCcccceEEEEEEECCe-E---EEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeE------E
Q 005999 394 AELLGRGSIGTTYKAVLDNH-L---IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGER------L 463 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~~~-~---~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~------~ 463 (665)
.+.||+|+||.||+|..... . .||+|+++.........+.+.+|++++++++||||+++++++...... +
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 107 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPM 107 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccE
Confidence 46799999999999985433 2 799999987655556678899999999999999999999999877655 8
Q ss_pred EEEEecCCCCHHHHHhcCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccc
Q 005999 464 VIYDYQPNGSLFNLIHGSRSI-RAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVL 542 (665)
Q Consensus 464 lv~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~ 542 (665)
+||||+.+|+|.+++...+.. ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 108 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~Dikp~NIli~~~~~~kl~Dfg~a~~ 186 (323)
T 3qup_A 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-FIHRDLAARNCMLAEDMTVCVADFGLSRK 186 (323)
T ss_dssp EEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred EEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC-cccCCCCcceEEEcCCCCEEEeecccccc
Confidence 999999999999998643221 2235899999999999999999999999 99999999999999999999999999976
Q ss_pred cCCCCC-----CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchh
Q 005999 543 SDSSSV-----EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREE 616 (665)
Q Consensus 543 ~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (665)
...... ...+++.|+|||.+. +..++.++|||||||++|||++ |+.||... ...+....+..... .....
T Consensus 187 ~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~~g~~p~~~~--~~~~~~~~~~~~~~-~~~~~ 262 (323)
T 3qup_A 187 IYSGDYYRQGCASKLPVKWLALESLA-DNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI--ENAEIYNYLIGGNR-LKQPP 262 (323)
T ss_dssp --------------CCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CGGGHHHHHHTTCC-CCCCT
T ss_pred ccccccccccccccCcccccCchhhc-CCCCCCccchhhHHHHHHHHHhCCCCCcccc--ChHHHHHHHhcCCC-CCCCC
Confidence 543321 224677899999987 5678999999999999999999 99999763 22344333332221 22344
Q ss_pred hhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhc
Q 005999 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVM 655 (665)
Q Consensus 617 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 655 (665)
..+..+.+++.+||+.||++|||+.|+++.|+++.+...
T Consensus 263 ~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 263 ECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 567789999999999999999999999999999987654
No 56
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.4e-41 Score=349.60 Aligned_cols=243 Identities=21% Similarity=0.321 Sum_probs=202.2
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchh----hHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEe
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTAD----TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDY 468 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 468 (665)
.+.||+|+||.||+|... ++..||+|++....... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 95 (326)
T 2y0a_A 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95 (326)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEc
Confidence 467999999999999965 68899999987553321 2467789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCC----ceEEeecccccccC
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADF----EARLTDYCLSVLSD 544 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~----~~kl~Dfgl~~~~~ 544 (665)
+++|+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++ .+||+|||++....
T Consensus 96 ~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~ 169 (326)
T 2y0a_A 96 VAGGELFDFLAE-----KESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169 (326)
T ss_dssp CCSCBHHHHHTT-----SSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred CCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHHHCC-eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence 999999999973 356899999999999999999999999 99999999999999887 89999999997765
Q ss_pred CC--CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC--chhhhHH
Q 005999 545 SS--SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG--REENRLG 620 (665)
Q Consensus 545 ~~--~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 620 (665)
.. .....||+.|+|||++. +..++.++|||||||++|||++|+.||... ...+....+........ .....+.
T Consensus 170 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (326)
T 2y0a_A 170 FGNEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANVSAVNYEFEDEYFSNTSA 246 (326)
T ss_dssp TTSCCCCCCSCTTTCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHHTCCCCCHHHHTTSCH
T ss_pred CCCccccccCCcCcCCceeec-CCCCCcHHHHHHHHHHHHHHHHCcCCCCCC--CHHHHHHHHHhcCCCcCccccccCCH
Confidence 33 23346899999999987 567899999999999999999999999752 11223222322222211 1234567
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 621 MLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 621 ~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 247 LAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHccCChhhCCCHHHHhc
Confidence 8999999999999999999999987
No 57
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.2e-40 Score=335.85 Aligned_cols=247 Identities=26% Similarity=0.390 Sum_probs=208.5
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCCH
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 474 (665)
+.||+|+||.||+|...++..||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||+++++|
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 90 (267)
T 3t9t_A 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCL 90 (267)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTTB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBH
T ss_pred eEecCCCceeEEEEEecCCCeEEEEEccccCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcH
Confidence 57999999999999998888999999976543 346789999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC----CCCC
Q 005999 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS----SVED 550 (665)
Q Consensus 475 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~----~~~~ 550 (665)
.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ....
T Consensus 91 ~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 165 (267)
T 3t9t_A 91 SDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 165 (267)
T ss_dssp HHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTST
T ss_pred HHHHhhC----cccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEECCCCCEEEcccccccccccccccccccc
Confidence 9999753 346899999999999999999999999 999999999999999999999999999765432 1233
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
.++..|+|||++. +..++.++||||||+++|||++ |+.||... ...+....+..... ...+...+..+.+++.+|
T Consensus 166 ~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~i~~~~~-~~~~~~~~~~l~~li~~~ 241 (267)
T 3t9t_A 166 KFPVKWASPEVFS-FSRYSSKSDVWSFGVLMWEVFSEGKIPYENR--SNSEVVEDISTGFR-LYKPRLASTHVYQIMNHC 241 (267)
T ss_dssp TCCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCC-CCCCTTSCHHHHHHHHHH
T ss_pred cccccccChhhhc-CCCccchhchhhhHHHHHHHhccCCCCCCCC--CHHHHHHHHhcCCc-CCCCccCcHHHHHHHHHH
Confidence 5678899999987 5678999999999999999999 89998753 12233333332211 123345577899999999
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHhh
Q 005999 630 SLKSPEQRPAMWQVLKMIQEIKES 653 (665)
Q Consensus 630 l~~dP~~RPt~~evl~~L~~~~~~ 653 (665)
|+.||++|||+.|+++.|+++.+.
T Consensus 242 l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 242 WRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999998764
No 58
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.4e-40 Score=342.72 Aligned_cols=250 Identities=18% Similarity=0.296 Sum_probs=203.9
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCc-hhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|... ++..||+|++..... .....+.+.+|+.++++++||||+++++++.+++..++||||+++|
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~ 96 (294)
T 4eqm_A 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGP 96 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred EEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCC
Confidence 67999999999999964 688999999865433 2345678999999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC----C
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS----V 548 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~----~ 548 (665)
+|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++++||+|||++....... .
T Consensus 97 ~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 170 (294)
T 4eqm_A 97 TLSEYIES-----HGPLSVDTAINFTNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTN 170 (294)
T ss_dssp BHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCSSSTTC---------
T ss_pred CHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEEeCCCccccccccccccC
Confidence 99999974 346899999999999999999999999 9999999999999999999999999997665432 2
Q ss_pred CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC-----chhhhHHHHH
Q 005999 549 EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG-----REENRLGMLT 623 (665)
Q Consensus 549 ~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~ 623 (665)
...||+.|+|||.+. +..++.++||||||+++|||++|+.||.... .............. .....+..+.
T Consensus 171 ~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 245 (294)
T 4eqm_A 171 HVLGTVQYFSPEQAK-GEATDECTDIYSIGIVLYEMLVGEPPFNGET----AVSIAIKHIQDSVPNVTTDVRKDIPQSLS 245 (294)
T ss_dssp ----CCSSCCHHHHH-TCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC----HHHHHHHHHSSCCCCHHHHSCTTSCHHHH
T ss_pred ccccCccccCHhHhc-CCCCCchHhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHhhccCCCcchhcccCCCHHHH
Confidence 235899999999987 5678999999999999999999999997632 11111111111111 2334677899
Q ss_pred HHHHHcccCCCCCCC-CHHHHHHHHHHHHhhhc
Q 005999 624 EVASVCSLKSPEQRP-AMWQVLKMIQEIKESVM 655 (665)
Q Consensus 624 ~li~~cl~~dP~~RP-t~~evl~~L~~~~~~~~ 655 (665)
+++.+|++.||++|| +++++.+.|+.+.....
T Consensus 246 ~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 246 NVILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp HHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred HHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 999999999999998 99999999988765543
No 59
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=5.8e-41 Score=355.59 Aligned_cols=255 Identities=21% Similarity=0.298 Sum_probs=207.1
Q ss_pred hHhCcccceEEEEEEE------CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCC-eEEEEE
Q 005999 395 ELLGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKG-ERLVIY 466 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-~~~lv~ 466 (665)
+.||+|+||.||+|.+ .+++.||||+++.... ....+.+.+|++++.++ +||||+++++++.+.+ ..++||
T Consensus 28 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 28 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred eeecCCCCceEEEEEeccccccccceEEEEEEecCcCC-HHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 6799999999999973 3578999999976543 34456789999999999 8999999999998755 489999
Q ss_pred EecCCCCHHHHHhcCCCC-------------------------------------------------------------C
Q 005999 467 DYQPNGSLFNLIHGSRSI-------------------------------------------------------------R 485 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~-------------------------------------------------------------~ 485 (665)
||+++|+|.++++..... .
T Consensus 107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLY 186 (359)
T ss_dssp ECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTT
T ss_pred EecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchh
Confidence 999999999999864321 0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC-----CCCCCCCcccCCc
Q 005999 486 AKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS-----VEDPDTVAYKAPE 560 (665)
Q Consensus 486 ~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-----~~~~gt~~y~aPE 560 (665)
...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ....+|+.|+|||
T Consensus 187 ~~~l~~~~~~~~~~ql~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE 265 (359)
T 3vhe_A 187 KDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 265 (359)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHH
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChh
Confidence 122899999999999999999999999 9999999999999999999999999997654322 1234688999999
Q ss_pred cccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHcccCCCCCCCC
Q 005999 561 IRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSLKSPEQRPA 639 (665)
Q Consensus 561 ~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt 639 (665)
++. +..++.++|||||||++|||++ |+.||..... ...+...+.... ....+...+..+.+++.+||+.||++|||
T Consensus 266 ~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps 342 (359)
T 3vhe_A 266 TIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCRRLKEGT-RMRAPDYTTPEMYQTMLDCWHGEPSQRPT 342 (359)
T ss_dssp HHH-HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-SHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hhc-CCCCCchhhhhhHHHHHHHHHhcCCCCCCccch-hHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHccCChhhCCC
Confidence 987 5778999999999999999998 9999976432 223333332221 22234456778999999999999999999
Q ss_pred HHHHHHHHHHHHhhh
Q 005999 640 MWQVLKMIQEIKESV 654 (665)
Q Consensus 640 ~~evl~~L~~~~~~~ 654 (665)
+.|+++.|+++.+..
T Consensus 343 ~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 343 FSELVEHLGNLLQAN 357 (359)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998753
No 60
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.6e-40 Score=348.44 Aligned_cols=241 Identities=18% Similarity=0.254 Sum_probs=201.2
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCc-hhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|... +++.||+|+++.... .....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg 90 (337)
T 1o6l_A 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 90 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 57999999999999965 688999999975422 1234567889999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCC---CCCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDS---SSVE 549 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~---~~~~ 549 (665)
+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+|||++..... ....
T Consensus 91 ~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 164 (337)
T 1o6l_A 91 ELFFHLSR-----ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 164 (337)
T ss_dssp BHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCC
T ss_pred cHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccc
Confidence 99999874 346899999999999999999999999 99999999999999999999999999975432 2233
Q ss_pred CCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 550 DPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
..||+.|+|||++. +..++.++|||||||++|||++|+.||... ....+...+.. .....+...+..+.+++.+|
T Consensus 165 ~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~--~~~~~p~~~s~~~~~li~~l 239 (337)
T 1o6l_A 165 FCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHERLFELILM--EEIRFPRTLSPEAKSLLAGL 239 (337)
T ss_dssp CEECGGGCCGGGGS-SSCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHH--CCCCCCTTSCHHHHHHHHHH
T ss_pred cccChhhCChhhhc-CCCCCchhhcccchhHHHHHhcCCCCCCCC--CHHHHHHHHHc--CCCCCCCCCCHHHHHHHHHH
Confidence 45899999999987 567899999999999999999999999752 12233332222 12223455677899999999
Q ss_pred ccCCCCCCC-----CHHHHHHH
Q 005999 630 SLKSPEQRP-----AMWQVLKM 646 (665)
Q Consensus 630 l~~dP~~RP-----t~~evl~~ 646 (665)
|+.||++|| ++.|+++.
T Consensus 240 L~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 240 LKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp TCSSTTTSTTCSTTTHHHHHTS
T ss_pred hhcCHHHhcCCCCCCHHHHHcC
Confidence 999999999 89999763
No 61
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=6.9e-41 Score=355.87 Aligned_cols=260 Identities=17% Similarity=0.219 Sum_probs=203.9
Q ss_pred hHhCcccceEEEEEEECC------eEEEEEEEecCCCchhhH---------HHHHHHHHHHHhCCCCCCeeeeeEEEEeC
Q 005999 395 ELLGRGSIGTTYKAVLDN------HLIVTVKRFDANKTADTS---------AEAFEQHMEAVGGLSHPNLVPIRAYFQAK 459 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~---------~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 459 (665)
+.||+|+||.||+|.... ++.||||++......... ...+.+|+..++.++||||+++++++...
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~ 120 (364)
T 3op5_A 41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD 120 (364)
T ss_dssp EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEE
T ss_pred EEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeec
Confidence 679999999999998764 378999998765421111 12234566678889999999999998764
Q ss_pred ----CeEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeC--CCCceE
Q 005999 460 ----GERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLG--ADFEAR 533 (665)
Q Consensus 460 ----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~--~~~~~k 533 (665)
...++||||+ +++|.+++.. ....+++..++.++.||+.||+|||+.+ |+||||||+|||++ .++.+|
T Consensus 121 ~~~~~~~~lv~e~~-g~~L~~~~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~Nill~~~~~~~~k 194 (364)
T 3op5_A 121 KNGKSYRFMIMDRF-GSDLQKIYEA----NAKRFSRKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLLNYKNPDQVY 194 (364)
T ss_dssp ETTEEEEEEEEECE-EEEHHHHHHH----TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEESSCTTCEE
T ss_pred cCCcceEEEEEeCC-CCCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eEEecCCHHHEEEecCCCCeEE
Confidence 4589999999 9999999975 2356999999999999999999999999 99999999999999 889999
Q ss_pred EeecccccccCCCC----------CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHH
Q 005999 534 LTDYCLSVLSDSSS----------VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLE 603 (665)
Q Consensus 534 l~Dfgl~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~ 603 (665)
|+|||++....... ....||+.|+|||++. +..++.++|||||||++|||+||+.||...... .....
T Consensus 195 l~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~-~~~~~ 272 (364)
T 3op5_A 195 LVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHN-GVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD-PKYVR 272 (364)
T ss_dssp ECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-HHHHH
T ss_pred EEECCcceecccCCcccccccCcccccCCCCCccCHHHhC-CCCCCchhhHHHHHHHHHHHHhCCCCccccccC-HHHHH
Confidence 99999996553221 2224899999999987 567999999999999999999999999853222 22222
Q ss_pred HHHhhccCC--------CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcccCcccC
Q 005999 604 WVRTMRVDD--------GREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDNAAF 662 (665)
Q Consensus 604 ~~~~~~~~~--------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~~~ 662 (665)
......... ......+..+.+++..||+.||++||++.++++.|+++.+......+..+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~ 339 (364)
T 3op5_A 273 DSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKL 339 (364)
T ss_dssp HHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCCcc
Confidence 111111110 01134577899999999999999999999999999999998876655544
No 62
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.7e-41 Score=356.14 Aligned_cols=255 Identities=23% Similarity=0.332 Sum_probs=208.2
Q ss_pred hHhCcccceEEEEEEEC------CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVLD------NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 468 (665)
+.||+|+||.||+|.+. ++..||||++..... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 77 ~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 155 (367)
T 3l9p_A 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 155 (367)
T ss_dssp EECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEe
Confidence 67999999999999843 467899999975443 34456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCC---ceEEeeccccccc
Q 005999 469 QPNGSLFNLIHGSRS--IRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADF---EARLTDYCLSVLS 543 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~---~~kl~Dfgl~~~~ 543 (665)
+++|+|.+++...+. .....+++..++.++.||+.||+|||+++ |+||||||+|||++.++ .+||+|||++...
T Consensus 156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~ 234 (367)
T 3l9p_A 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 234 (367)
T ss_dssp CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred CCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEEecCCCCceEEECCCcccccc
Confidence 999999999975432 12346899999999999999999999999 99999999999999554 5999999999643
Q ss_pred CCC-----CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhh
Q 005999 544 DSS-----SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREEN 617 (665)
Q Consensus 544 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (665)
... .....+|+.|+|||++. +..++.++|||||||++|||++ |+.||... ...++...+..... ......
T Consensus 235 ~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~DvwslG~il~ellt~g~~pf~~~--~~~~~~~~i~~~~~-~~~~~~ 310 (367)
T 3l9p_A 235 YRAGYYRKGGCAMLPVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEVLEFVTSGGR-MDPPKN 310 (367)
T ss_dssp HHHSSCTTCCGGGSCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHTTCC-CCCCTT
T ss_pred ccccccccCCCcCCcccEECHHHhc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC-CCCCcc
Confidence 221 12224688999999987 5679999999999999999998 99999763 22244443333221 223456
Q ss_pred hHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhc
Q 005999 618 RLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVM 655 (665)
Q Consensus 618 ~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 655 (665)
.+..+.+++.+||+.||++|||+.|+++.|+.+.+...
T Consensus 311 ~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 311 CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 67789999999999999999999999999999877543
No 63
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=7.6e-41 Score=365.92 Aligned_cols=248 Identities=25% Similarity=0.435 Sum_probs=208.2
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCCH
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 474 (665)
+.||+|+||.||+|...++..||||+++... ...+.|.+|++++++++||||+++++++. .+..++||||+.+|+|
T Consensus 194 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L 269 (454)
T 1qcf_A 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSL 269 (454)
T ss_dssp EEEECCSSEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBH
T ss_pred EEcccCCceEEEEEEECCccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcH
Confidence 5799999999999999888899999997654 34678999999999999999999999986 5678999999999999
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC----CCCC
Q 005999 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS----SVED 550 (665)
Q Consensus 475 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~----~~~~ 550 (665)
.++++.. ....+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++...... ....
T Consensus 270 ~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 345 (454)
T 1qcf_A 270 LDFLKSD---EGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 345 (454)
T ss_dssp HHHHHSH---HHHTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSS
T ss_pred HHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCC
Confidence 9999742 1235888999999999999999999999 999999999999999999999999999776432 1223
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
.++..|+|||++. ...++.++|||||||++|||+| |+.||... ...++...+..... ...+..++..+.+++.+|
T Consensus 346 ~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~-~~~~~~~~~~l~~li~~c 421 (454)
T 1qcf_A 346 KFPIKWTAPEAIN-FGSFTIKSDVWSFGILLMEIVTYGRIPYPGM--SNPEVIRALERGYR-MPRPENCPEELYNIMMRC 421 (454)
T ss_dssp SSCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHHTCC-CCCCTTSCHHHHHHHHHH
T ss_pred cccccccCHHHhc-cCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHH
Confidence 4678899999987 5679999999999999999999 99999753 22344444433221 223456778899999999
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 630 SLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 630 l~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
|+.||++|||+.+|++.|+++....
T Consensus 422 l~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 422 WKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp TCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred ccCChhHCcCHHHHHHHHHHHHhcc
Confidence 9999999999999999998876543
No 64
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2e-40 Score=344.38 Aligned_cols=257 Identities=24% Similarity=0.346 Sum_probs=211.6
Q ss_pred HhHhCcccceEEEEEEE------CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEE
Q 005999 394 AELLGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIY 466 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 466 (665)
.+.||+|+||.||+|.. .++..||+|++..... ....+.+.+|+.+++++ +||||+++++++..++..++||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 106 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh-HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEE
Confidence 36799999999999985 3678999999976543 23457789999999999 9999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceE
Q 005999 467 DYQPNGSLFNLIHGSRSI-------------RAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEAR 533 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~-------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~k 533 (665)
||+++|+|.+++...+.. ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~k 185 (313)
T 1t46_A 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGRITK 185 (313)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETTTEEE
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEcCCCCEE
Confidence 999999999999854321 1235899999999999999999999999 99999999999999999999
Q ss_pred EeecccccccCCCCC-----CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHh
Q 005999 534 LTDYCLSVLSDSSSV-----EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT 607 (665)
Q Consensus 534 l~Dfgl~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~ 607 (665)
|+|||++........ ...+|+.|+|||++. +..++.++||||||+++|||++ |+.||..... .......+..
T Consensus 186 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-~~~~~~~~~~ 263 (313)
T 1t46_A 186 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV-DSKFYKMIKE 263 (313)
T ss_dssp ECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS-SHHHHHHHHH
T ss_pred EccccccccccccccceeccCCCCcceeeChHHhc-CCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc-hhHHHHHhcc
Confidence 999999976654322 223577899999887 5678999999999999999999 9999976422 2233333332
Q ss_pred hccCCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhc
Q 005999 608 MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVM 655 (665)
Q Consensus 608 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 655 (665)
.. ........+..+.+++.+||+.||++|||+.|+++.|+++..+..
T Consensus 264 ~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 264 GF-RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp TC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred CC-CCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 22 222344567789999999999999999999999999999987654
No 65
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.8e-40 Score=341.50 Aligned_cols=245 Identities=17% Similarity=0.250 Sum_probs=198.9
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||+||+|... +++.||+|++..........+.+.+|+.++++++||||+++++++.+++..++||||+.+ +
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 86 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-D 86 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-E
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-C
Confidence 57999999999999975 688999999987665556667889999999999999999999999999999999999986 6
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC---CCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS---VED 550 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~---~~~ 550 (665)
+.+.+.. ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ...
T Consensus 87 l~~~~~~----~~~~l~~~~~~~~~~ql~~~l~~lH~~~-ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 161 (292)
T 3o0g_A 87 LKKYFDS----CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE 161 (292)
T ss_dssp HHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSC
T ss_pred HHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCC
Confidence 6666653 2356999999999999999999999999 9999999999999999999999999997664322 234
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC------------------
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD------------------ 612 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~------------------ 612 (665)
.+|+.|+|||++.+...++.++|||||||++|||++|..|+.........+....+......
T Consensus 162 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (292)
T 3o0g_A 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM 241 (292)
T ss_dssp CSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCC
T ss_pred ccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccccccc
Confidence 67999999999875555899999999999999999998886443211112222222111110
Q ss_pred --------CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 613 --------GREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 613 --------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
......+..+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 242 YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 011235677899999999999999999999986
No 66
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=344.77 Aligned_cols=250 Identities=24% Similarity=0.400 Sum_probs=198.3
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCCH
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 474 (665)
+.||+|+||.||+|... +..||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||+++|+|
T Consensus 14 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~~L 86 (307)
T 2eva_A 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSL 86 (307)
T ss_dssp EEEECCSSSEEEEEEET-TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTCBH
T ss_pred eEeecCCCceEEEEEEC-CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCCCH
Confidence 67999999999999886 567999998643 345678999999999999999999998874 47899999999999
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCeeccCCCCCceEeCCCCc-eEEeecccccccCCCCCCC
Q 005999 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR---ASWLIHGNLKSSNVLLGADFE-ARLTDYCLSVLSDSSSVED 550 (665)
Q Consensus 475 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~---~~~iiH~Dlk~~Nill~~~~~-~kl~Dfgl~~~~~~~~~~~ 550 (665)
.++++... ....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++. +||+|||++..........
T Consensus 87 ~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~-ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~ 163 (307)
T 2eva_A 87 YNVLHGAE--PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN 163 (307)
T ss_dssp HHHHHCSS--SEECCCHHHHHHHHHHHHHHHHHHHTCSSSC-CCCCCCSGGGEEEETTTTEEEECCCCC-----------
T ss_pred HHHHhccC--CCCccCHHHHHHHHHHHHHHHHHHHhCCCCC-eecCCCChhHEEEeCCCCEEEEcccccccccccccccC
Confidence 99998532 22357889999999999999999999 67 999999999999998886 7999999997766555555
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHcc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCS 630 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 630 (665)
.||+.|+|||++. +..++.++||||||+++|||++|+.||.............+.. ..........+..+.+++.+||
T Consensus 164 ~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l 241 (307)
T 2eva_A 164 KGSAAWMAPEVFE-GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN-GTRPPLIKNLPKPIESLMTRCW 241 (307)
T ss_dssp -CCTTSSCHHHHT-CCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHT-TCCCCCBTTCCHHHHHHHHHHT
T ss_pred CCCCceEChhhhC-CCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhc-CCCCCcccccCHHHHHHHHHHh
Confidence 7899999999987 5678999999999999999999999997643222222222222 1122234556778999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHhhhcc
Q 005999 631 LKSPEQRPAMWQVLKMIQEIKESVMA 656 (665)
Q Consensus 631 ~~dP~~RPt~~evl~~L~~~~~~~~~ 656 (665)
+.||++|||+.|+++.|+.+......
T Consensus 242 ~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 242 SKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp CSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred cCChhhCcCHHHHHHHHHHHHHhccC
Confidence 99999999999999999999876543
No 67
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2e-40 Score=342.38 Aligned_cols=243 Identities=25% Similarity=0.404 Sum_probs=192.2
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHh--CCCCCCeeeeeEEEEe----CCeEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVG--GLSHPNLVPIRAYFQA----KGERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~--~l~h~niv~l~~~~~~----~~~~~lv~e~ 468 (665)
+.||+|+||+||+|.. +++.||||++.... .+.+.+|.+++. +++||||+++++++.. ....++||||
T Consensus 14 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~ 87 (301)
T 3q4u_A 14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSRD-----EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHY 87 (301)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECC
T ss_pred EeeccCCCcEEEEEEE-CCEEEEEEEecccc-----chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhh
Confidence 6799999999999988 57789999986432 233444555554 4899999999998754 2468899999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCeeccCCCCCceEeCCCCceEEeecccc
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH--------RASWLIHGNLKSSNVLLGADFEARLTDYCLS 540 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH--------~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~ 540 (665)
+++|+|.++++. ..+++..++.++.||+.||+||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 88 ~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 88 HEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp CTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred ccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-eecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999963 35899999999999999999999 888 999999999999999999999999998
Q ss_pred cccCCCC-------CCCCCCCcccCCccccCCC-----CCCCcchHHHHHHHHHHHHhC----------CCCCCCCCCCC
Q 005999 541 VLSDSSS-------VEDPDTVAYKAPEIRKSSR-----RATSKSDVYAFGVLLLELLTG----------KHPSQHPYLAP 598 (665)
Q Consensus 541 ~~~~~~~-------~~~~gt~~y~aPE~~~~~~-----~~~~k~DvwSlGvvl~elltg----------~~P~~~~~~~~ 598 (665)
....... ....||+.|+|||++.... .++.++|||||||++|||++| +.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 6543322 2236899999999987432 344789999999999999999 88887654433
Q ss_pred ccHHHHHHhhccCC---C-----chhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 005999 599 PDMLEWVRTMRVDD---G-----REENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650 (665)
Q Consensus 599 ~~~~~~~~~~~~~~---~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 650 (665)
.............. . .....+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 33333322221111 1 1234667899999999999999999999999999876
No 68
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.8e-40 Score=342.98 Aligned_cols=260 Identities=18% Similarity=0.276 Sum_probs=202.7
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCc-hhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|.. .++..||+|++..... .....+.+.+|+.++++++||||+++++++..++..++||||+.+|
T Consensus 38 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 117 (310)
T 2wqm_A 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAG 117 (310)
T ss_dssp EEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSC
T ss_pred EeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCC
Confidence 6799999999999996 4788999999975432 2345677899999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC---CC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS---VE 549 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~---~~ 549 (665)
+|.+++..... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ..
T Consensus 118 ~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 195 (310)
T 2wqm_A 118 DLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS 195 (310)
T ss_dssp BHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCC---------------
T ss_pred CHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccccc
Confidence 99999864221 2456899999999999999999999999 9999999999999999999999999987654332 22
Q ss_pred CCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 550 DPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
..+++.|+|||++. +..++.++||||||+++|||++|+.||.........+...+.............+..+.+++.+|
T Consensus 196 ~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 274 (310)
T 2wqm_A 196 LVGTPYYMSPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMC 274 (310)
T ss_dssp ---CCSSCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHH
T ss_pred cCCCeeEeChHHhC-CCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHH
Confidence 35889999999987 56789999999999999999999999975432222333333332222222345677899999999
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHhhhccc
Q 005999 630 SLKSPEQRPAMWQVLKMIQEIKESVMAE 657 (665)
Q Consensus 630 l~~dP~~RPt~~evl~~L~~~~~~~~~~ 657 (665)
|+.||++|||+.|+++.|+++.......
T Consensus 275 l~~dp~~Rps~~~il~~l~~l~~~~~~~ 302 (310)
T 2wqm_A 275 INPDPEKRPDVTYVYDVAKRMHACTASS 302 (310)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred cCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999999998877654
No 69
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.4e-40 Score=348.18 Aligned_cols=248 Identities=18% Similarity=0.298 Sum_probs=200.4
Q ss_pred hHhCcccceEEEEEEEC-CeE----EEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEec
Q 005999 395 ELLGRGSIGTTYKAVLD-NHL----IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQ 469 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 469 (665)
+.||+|+||+||+|... ++. .||+|.+..... ....+.+.+|+.++++++||||+++++++.+.. .++|+||+
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~ 98 (327)
T 3poz_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLM 98 (327)
T ss_dssp EEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECC
T ss_pred eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccC-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEec
Confidence 67999999999999854 343 358888764432 244577899999999999999999999998765 78999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCCC-
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSV- 548 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~- 548 (665)
.+|+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 99 ~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 173 (327)
T 3poz_A 99 PFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173 (327)
T ss_dssp TTCBHHHHHHHS----TTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-
T ss_pred CCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCChheEEECCCCCEEEccCcceeEccCCccc
Confidence 999999999753 356899999999999999999999999 99999999999999999999999999976543321
Q ss_pred ----CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHH
Q 005999 549 ----EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLT 623 (665)
Q Consensus 549 ----~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 623 (665)
...+|+.|+|||++. +..++.++|||||||++|||++ |+.||... ....+...+.... ....+...+..+.
T Consensus 174 ~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~ 249 (327)
T 3poz_A 174 YHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGE-RLPQPPICTIDVY 249 (327)
T ss_dssp ------CCCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CGGGHHHHHHTTC-CCCCCTTBCHHHH
T ss_pred ccccCCCccccccChHHhc-cCCCCchhhhhhhHHHHHHHHhcCCCCccCC--CHHHHHHHHHcCC-CCCCCccCCHHHH
Confidence 224578999999987 6779999999999999999999 99999763 2334444444322 2223455677899
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHHHHHhh
Q 005999 624 EVASVCSLKSPEQRPAMWQVLKMIQEIKES 653 (665)
Q Consensus 624 ~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 653 (665)
+++.+||+.||++|||+.|+++.|+.+...
T Consensus 250 ~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 250 MIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 999999999999999999999999998754
No 70
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.4e-40 Score=338.56 Aligned_cols=250 Identities=23% Similarity=0.338 Sum_probs=198.4
Q ss_pred HhHhCcccceEEEEEEEC----CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEec
Q 005999 394 AELLGRGSIGTTYKAVLD----NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQ 469 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 469 (665)
.+.||+|+||.||+|... .+..||+|++..... ....+.+.+|+.++++++||||+++++++. ++..++||||+
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~ 97 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 97 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecC
Confidence 367999999999999864 355799999876543 345677899999999999999999999985 45689999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC--
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-- 547 (665)
++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 172 (281)
T 1mp8_A 98 TLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 172 (281)
T ss_dssp TTEEHHHHHHHT----TTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC-------------
T ss_pred CCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHEEECCCCCEEECccccccccCccccc
Confidence 999999999752 346899999999999999999999999 9999999999999999999999999997665432
Q ss_pred --CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHH
Q 005999 548 --VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTE 624 (665)
Q Consensus 548 --~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 624 (665)
....+|+.|+|||++. +..++.++||||||+++|||++ |+.||... ...+....+..... ...+...+..+.+
T Consensus 173 ~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~ell~~g~~pf~~~--~~~~~~~~i~~~~~-~~~~~~~~~~l~~ 248 (281)
T 1mp8_A 173 KASKGKLPIKWMAPESIN-FRRFTSASDVWMFGVCMWEILMHGVKPFQGV--KNNDVIGRIENGER-LPMPPNCPPTLYS 248 (281)
T ss_dssp ------CCGGGCCHHHHH-HCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC--CGGGHHHHHHTTCC-CCCCTTCCHHHHH
T ss_pred ccccCCCcccccChhhcc-cCCCCCccCchHHHHHHHHHHhcCCCCCCcC--CHHHHHHHHHcCCC-CCCCCCCCHHHHH
Confidence 1224678899999987 5678999999999999999996 99999763 23344444433221 2234566788999
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 625 VASVCSLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 625 li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
++.+||+.||++|||+.|+++.|+++.+..
T Consensus 249 li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 249 LMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999997754
No 71
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1e-40 Score=339.14 Aligned_cols=246 Identities=24% Similarity=0.368 Sum_probs=192.2
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCch--hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTA--DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|... +..||+|++...... ....+.+.+|+++++.++||||+++++++.+++..++||||++++
T Consensus 13 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 91 (271)
T 3dtc_A 13 EIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGG 91 (271)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTE
T ss_pred eeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCC
Confidence 57999999999999976 678999998755332 233567899999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CeeccCCCCCceEeCC--------CCceEEeecccccc
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS--WLIHGNLKSSNVLLGA--------DFEARLTDYCLSVL 542 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~--~iiH~Dlk~~Nill~~--------~~~~kl~Dfgl~~~ 542 (665)
+|.+++.. ..+++..++.++.|++.||+|||+.+ +|+||||||+||+++. ++.+||+|||++..
T Consensus 92 ~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~ 165 (271)
T 3dtc_A 92 PLNRVLSG------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE 165 (271)
T ss_dssp EHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC---
T ss_pred CHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccc
Confidence 99999852 46899999999999999999999987 3789999999999986 67899999999976
Q ss_pred cCCCC-CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHH
Q 005999 543 SDSSS-VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM 621 (665)
Q Consensus 543 ~~~~~-~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (665)
..... ....+|+.|+|||.+. +..++.++||||||+++|||++|+.||.... .......+.........+...+..
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 242 (271)
T 3dtc_A 166 WHRTTKMSAAGAYAWMAPEVIR-ASMFSKGSDVWSYGVLLWELLTGEVPFRGID--GLAVAYGVAMNKLALPIPSTCPEP 242 (271)
T ss_dssp ----------CCGGGSCHHHHH-HCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC--HHHHHHHHHTSCCCCCCCTTCCHH
T ss_pred cccccccCCCCccceeCHHHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHhhhcCCCCCCCCcccCHH
Confidence 54432 2346899999999987 5678999999999999999999999997531 112222222222222344566788
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 005999 622 LTEVASVCSLKSPEQRPAMWQVLKMIQEI 650 (665)
Q Consensus 622 l~~li~~cl~~dP~~RPt~~evl~~L~~~ 650 (665)
+.+++.+||+.||++|||+.|+++.|+++
T Consensus 243 ~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 243 FAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred HHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 99999999999999999999999999754
No 72
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=343.24 Aligned_cols=242 Identities=21% Similarity=0.323 Sum_probs=192.5
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchh------------------------hHHHHHHHHHHHHhCCCCCCe
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTAD------------------------TSAEAFEQHMEAVGGLSHPNL 449 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~------------------------~~~~~~~~e~~~l~~l~h~ni 449 (665)
+.||+|+||.||+|.. .+++.||+|++....... ...+.+.+|++++++++||||
T Consensus 19 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 98 (298)
T 2zv2_A 19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNV 98 (298)
T ss_dssp EEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTB
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCC
Confidence 5799999999999986 468899999986543211 123568899999999999999
Q ss_pred eeeeEEEEe--CCeEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeC
Q 005999 450 VPIRAYFQA--KGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLG 527 (665)
Q Consensus 450 v~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~ 527 (665)
+++++++.+ .+..++||||+++++|.+++. ...+++..++.++.||+.||+|||+.+ |+||||||+||+++
T Consensus 99 v~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~ 171 (298)
T 2zv2_A 99 VKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT------LKPLSEDQARFYFQDLIKGIEYLHYQK-IIHRDIKPSNLLVG 171 (298)
T ss_dssp CCEEEEEECSSSSEEEEEEECCTTCBSCCSSC------SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEC
T ss_pred CeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEC
Confidence 999999987 568899999999999987643 346999999999999999999999999 99999999999999
Q ss_pred CCCceEEeecccccccCCCC---CCCCCCCcccCCccccCCCC--CCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHH
Q 005999 528 ADFEARLTDYCLSVLSDSSS---VEDPDTVAYKAPEIRKSSRR--ATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDML 602 (665)
Q Consensus 528 ~~~~~kl~Dfgl~~~~~~~~---~~~~gt~~y~aPE~~~~~~~--~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~ 602 (665)
.++.+||+|||++....... ....||+.|+|||++..... ++.++|||||||++|||++|+.||.... ...+.
T Consensus 172 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--~~~~~ 249 (298)
T 2zv2_A 172 EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER--IMCLH 249 (298)
T ss_dssp TTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHH
T ss_pred CCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc--HHHHH
Confidence 99999999999997665432 33468999999999874332 4778999999999999999999997531 11222
Q ss_pred HHHHhhccCCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 603 EWVRTMRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
..+.............+..+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 250 SKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 2222222222223456778999999999999999999999975
No 73
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.7e-40 Score=339.94 Aligned_cols=251 Identities=20% Similarity=0.313 Sum_probs=206.6
Q ss_pred HhCcccceEEEEEEE---CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 396 LLGRGSIGTTYKAVL---DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 396 ~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
.||+|+||.||+|.. .++..||||++..........+.+.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 102 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG 102 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCC
Confidence 799999999999964 3578999999987655445577899999999999999999999999 566789999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC-----
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS----- 547 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~----- 547 (665)
+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 103 ~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 176 (291)
T 1xbb_A 103 PLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 176 (291)
T ss_dssp EHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC
T ss_pred CHHHHHHh-----CcCCCHHHHHHHHHHHHHHHHHHHhCC-eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccc
Confidence 99999974 245899999999999999999999999 9999999999999999999999999997664332
Q ss_pred -CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHH
Q 005999 548 -VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEV 625 (665)
Q Consensus 548 -~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 625 (665)
....+++.|+|||.+. +..++.++||||||+++|||++ |+.||... ...++...+..... ...+...+..+.++
T Consensus 177 ~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~l~~l 252 (291)
T 1xbb_A 177 QTHGKWPVKWYAPECIN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTAMLEKGER-MGCPAGCPREMYDL 252 (291)
T ss_dssp ----CCCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCC-CCCCTTCCHHHHHH
T ss_pred cccCCCCceeeChHHhc-cCCCChhhhHHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHcCCC-CCCCCCCCHHHHHH
Confidence 1223578899999987 5668899999999999999999 99999763 22234443333221 22345667889999
Q ss_pred HHHcccCCCCCCCCHHHHHHHHHHHHhhhccc
Q 005999 626 ASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657 (665)
Q Consensus 626 i~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~ 657 (665)
+.+||+.||++||++.|+++.|+++..+...+
T Consensus 253 i~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 284 (291)
T 1xbb_A 253 MNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 284 (291)
T ss_dssp HHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCChhhCcCHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999998877643
No 74
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.5e-40 Score=351.40 Aligned_cols=246 Identities=18% Similarity=0.278 Sum_probs=200.5
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCch---hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEec
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA---DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQ 469 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 469 (665)
.+.||+|+||.||+|... +++.||+|++...... ....+.+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 108 (351)
T 3c0i_A 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108 (351)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCC
Confidence 467999999999999864 6889999998643211 123567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCc---eEEeecccccccCCC
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFE---ARLTDYCLSVLSDSS 546 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~---~kl~Dfgl~~~~~~~ 546 (665)
++|+|.+++..... ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++. +||+|||++......
T Consensus 109 ~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~ 186 (351)
T 3c0i_A 109 DGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNN-IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES 186 (351)
T ss_dssp SSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTT
T ss_pred CCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChHHeEEecCCCCCcEEEecCcceeEecCC
Confidence 99999988764221 2345899999999999999999999999 999999999999986654 999999999776543
Q ss_pred C---CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC--chhhhHHH
Q 005999 547 S---VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG--REENRLGM 621 (665)
Q Consensus 547 ~---~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 621 (665)
. ....||+.|+|||++. +..++.++|||||||++|||++|+.||... ...+...+........ .....+..
T Consensus 187 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~---~~~~~~~i~~~~~~~~~~~~~~~s~~ 262 (351)
T 3c0i_A 187 GLVAGGRVGTPHFMAPEVVK-REPYGKPVDVWGCGVILFILLSGCLPFYGT---KERLFEGIIKGKYKMNPRQWSHISES 262 (351)
T ss_dssp SCBCCCCCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCSS---HHHHHHHHHHTCCCCCHHHHTTSCHH
T ss_pred CeeecCCcCCcCccCHHHHc-CCCCCchHhhHHHHHHHHHHHHCCCCCCCc---HHHHHHHHHcCCCCCCccccccCCHH
Confidence 2 2346899999999987 567899999999999999999999999752 2233332322222111 12345678
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 005999 622 LTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 622 l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
+.+++.+||+.||++|||+.|+++
T Consensus 263 ~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 263 AKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHCCCChhHCcCHHHHhc
Confidence 999999999999999999999986
No 75
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.4e-40 Score=341.90 Aligned_cols=249 Identities=25% Similarity=0.432 Sum_probs=197.3
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCCH
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 474 (665)
+.||+|+||.||+|...+ .||+|+++.........+.+.+|++++++++||||+++++++ .....++||||+.+++|
T Consensus 30 ~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L 106 (289)
T 3og7_A 30 QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSL 106 (289)
T ss_dssp EEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEH
T ss_pred eEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcH
Confidence 679999999999998654 499999987766566678899999999999999999999965 45568999999999999
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC-----CC
Q 005999 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS-----VE 549 (665)
Q Consensus 475 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-----~~ 549 (665)
.+++.. ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ..
T Consensus 107 ~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 181 (289)
T 3og7_A 107 YHHLHA----SETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ 181 (289)
T ss_dssp HHHHTT----C---CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC----------------
T ss_pred HHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEEccceeccccccccccccccc
Confidence 999964 2456899999999999999999999999 9999999999999999999999999987554311 22
Q ss_pred CCCCCcccCCcccc--CCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC---CchhhhHHHHHH
Q 005999 550 DPDTVAYKAPEIRK--SSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD---GREENRLGMLTE 624 (665)
Q Consensus 550 ~~gt~~y~aPE~~~--~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~ 624 (665)
..||+.|+|||++. ....++.++||||||+++|||++|+.||.... ....+...+....... .....++..+.+
T Consensus 182 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 260 (289)
T 3og7_A 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIEMVGRGSLSPDLSKVRSNCPKRMKR 260 (289)
T ss_dssp --CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC-CHHHHHHHHHHTSCCCCTTSSCTTSCHHHHH
T ss_pred cCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc-hHHHHHHHhcccccCcchhhccccCCHHHHH
Confidence 35899999999875 24567889999999999999999999997632 2223333333332222 123456788999
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHHHHh
Q 005999 625 VASVCSLKSPEQRPAMWQVLKMIQEIKE 652 (665)
Q Consensus 625 li~~cl~~dP~~RPt~~evl~~L~~~~~ 652 (665)
++.+||+.||++|||+.|+++.|+++.+
T Consensus 261 li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 261 LMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 9999999999999999999999998754
No 76
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.5e-40 Score=352.43 Aligned_cols=242 Identities=20% Similarity=0.264 Sum_probs=189.7
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||+||++... +++.||+|++..... ..+.+.+|+.++++++||||+++++++.+.+..++||||+.+|+
T Consensus 26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~ 102 (361)
T 3uc3_A 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGE 102 (361)
T ss_dssp EEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCC
Confidence 67999999999999975 788999999976542 23567899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCc--eEEeecccccccCC--CCCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFE--ARLTDYCLSVLSDS--SSVE 549 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~--~kl~Dfgl~~~~~~--~~~~ 549 (665)
|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++..... ....
T Consensus 103 L~~~l~~-----~~~~~~~~~~~i~~ql~~~L~~LH~~~-ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 176 (361)
T 3uc3_A 103 LYERICN-----AGRFSEDEARFFFQQLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS 176 (361)
T ss_dssp HHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCSCCCCGGGEEECSSSSCCEEECCCCCC-----------
T ss_pred HHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCC
Confidence 9999874 345899999999999999999999999 999999999999987765 99999999864332 2233
Q ss_pred CCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhcc---CCCchhhhHHHHHHHH
Q 005999 550 DPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRV---DDGREENRLGMLTEVA 626 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li 626 (665)
..||+.|+|||++......+.++|||||||++|||++|+.||...... ......+..... ........+..+.+|+
T Consensus 177 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li 255 (361)
T 3uc3_A 177 TVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP-RDYRKTIQRILSVKYSIPDDIRISPECCHLI 255 (361)
T ss_dssp ----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C-CCHHHHHHHHHTTCCCCCTTSCCCHHHHHHH
T ss_pred CcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH-HHHHHHHHHHhcCCCCCCCcCCCCHHHHHHH
Confidence 468999999999874333344589999999999999999999764322 223333322222 2222334567899999
Q ss_pred HHcccCCCCCCCCHHHHHHH
Q 005999 627 SVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 627 ~~cl~~dP~~RPt~~evl~~ 646 (665)
.+||+.||++|||+.|+++.
T Consensus 256 ~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 256 SRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHHSCSCTTTSCCHHHHHTS
T ss_pred HHHccCChhHCcCHHHHHhC
Confidence 99999999999999999874
No 77
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=7.7e-41 Score=369.50 Aligned_cols=248 Identities=24% Similarity=0.399 Sum_probs=209.8
Q ss_pred hHhCcccceEEEEEEECC-eEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLDN-HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|.+.. +..||||.++... ...+.|.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 226 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~ 302 (495)
T 1opk_A 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 302 (495)
T ss_dssp EESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred eEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCC
Confidence 679999999999999764 7899999997654 335679999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC----CC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS----VE 549 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~----~~ 549 (665)
|.+++... ....+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++....... ..
T Consensus 303 L~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 378 (495)
T 1opk_A 303 LLDYLREC---NRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378 (495)
T ss_dssp HHHHHHHS---CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTT
T ss_pred HHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEECCCCcEEEeecccceeccCCceeecCC
Confidence 99999753 2356899999999999999999999999 9999999999999999999999999997764322 22
Q ss_pred CCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHH
Q 005999 550 DPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASV 628 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 628 (665)
..++..|+|||++. ...++.++|||||||++|||++ |+.||... ...++...+.... ....+..++..+.+|+.+
T Consensus 379 ~~~~~~y~aPE~~~-~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~ 454 (495)
T 1opk_A 379 AKFPIKWTAPESLA-YNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDY-RMERPEGCPEKVYELMRA 454 (495)
T ss_dssp CCCCGGGCCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCSSTTC--CGGGHHHHHHTTC-CCCCCTTCCHHHHHHHHH
T ss_pred CcCCcceeCHhHHh-cCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHH
Confidence 23567899999987 5678999999999999999999 99999763 2334444443322 122345677889999999
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHhh
Q 005999 629 CSLKSPEQRPAMWQVLKMIQEIKES 653 (665)
Q Consensus 629 cl~~dP~~RPt~~evl~~L~~~~~~ 653 (665)
||+.||++|||+.|+++.|+.+.+.
T Consensus 455 cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 455 CWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HcCcChhHCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999987544
No 78
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-40 Score=342.98 Aligned_cols=239 Identities=19% Similarity=0.210 Sum_probs=192.6
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
.+.||+|+||+||+|... +++.||||++............+..|+..+.++ +||||++++++|.+++..++||||+ +
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~ 140 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-C
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-C
Confidence 467999999999999976 789999999876554444445555666555555 9999999999999999999999999 6
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC--CC
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS--VE 549 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~--~~ 549 (665)
++|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++....... ..
T Consensus 141 ~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 215 (311)
T 3p1a_A 141 PSLQQHCEAW----GASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV 215 (311)
T ss_dssp CBHHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECGGGCEEECCCTTCEECC------C
T ss_pred CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcc
Confidence 6999988753 346999999999999999999999999 9999999999999999999999999987665432 23
Q ss_pred CCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 550 DPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
..||+.|+|||++. + .++.++|||||||++|||++|..|+.. .+....+.............+..+.+++.+|
T Consensus 216 ~~gt~~y~aPE~~~-~-~~~~~~DiwslG~il~el~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 288 (311)
T 3p1a_A 216 QEGDPRYMAPELLQ-G-SYGTAADVFSLGLTILEVACNMELPHG-----GEGWQQLRQGYLPPEFTAGLSSELRSVLVMM 288 (311)
T ss_dssp CCCCGGGCCGGGGG-T-CCSTHHHHHHHHHHHHHHHHTCCCCSS-----HHHHHHHTTTCCCHHHHTTSCHHHHHHHHHH
T ss_pred cCCCccccCHhHhc-C-CCCchhhHHHHHHHHHHHHhCCCCCCC-----ccHHHHHhccCCCcccccCCCHHHHHHHHHH
Confidence 35899999999987 3 689999999999999999999776543 1112222221111122345667899999999
Q ss_pred ccCCCCCCCCHHHHHH
Q 005999 630 SLKSPEQRPAMWQVLK 645 (665)
Q Consensus 630 l~~dP~~RPt~~evl~ 645 (665)
|+.||++|||+.|+++
T Consensus 289 L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 289 LEPDPKLRATAEALLA 304 (311)
T ss_dssp SCSSTTTSCCHHHHHT
T ss_pred cCCChhhCcCHHHHHh
Confidence 9999999999999986
No 79
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.4e-40 Score=341.86 Aligned_cols=252 Identities=18% Similarity=0.265 Sum_probs=203.6
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCC--eEEEEEEecCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKG--ERLVIYDYQPN 471 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e~~~~ 471 (665)
+.||+|+||.||+|... +++.||||++..... ....+.+.+|++++++++||||+++++++.... ..++||||+++
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (319)
T 4euu_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (319)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTT
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCC
Confidence 57999999999999976 488999999975433 233566789999999999999999999998755 78999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEe----CCCCceEEeecccccccCCCC
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL----GADFEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill----~~~~~~kl~Dfgl~~~~~~~~ 547 (665)
|+|.+++.... ....+++..++.++.||+.||+|||+.+ |+||||||+||++ +.++.+||+|||++.......
T Consensus 94 ~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~ 170 (319)
T 4euu_A 94 GSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170 (319)
T ss_dssp CBHHHHHHSGG--GTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC
T ss_pred CCHHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC
Confidence 99999998532 2234899999999999999999999999 9999999999999 788889999999997765433
Q ss_pred --CCCCCCCcccCCccccC-------CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc--cHHHHHHhhccCC----
Q 005999 548 --VEDPDTVAYKAPEIRKS-------SRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP--DMLEWVRTMRVDD---- 612 (665)
Q Consensus 548 --~~~~gt~~y~aPE~~~~-------~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~--~~~~~~~~~~~~~---- 612 (665)
....||+.|+|||++.. +..++.++|||||||++|||++|+.||........ +....+.......
T Consensus 171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~ 250 (319)
T 4euu_A 171 QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISG 250 (319)
T ss_dssp CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEE
T ss_pred ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchh
Confidence 33468999999998752 35789999999999999999999999975432222 2222222211110
Q ss_pred -------------------CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHH
Q 005999 613 -------------------GREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEI 650 (665)
Q Consensus 613 -------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 650 (665)
......+..+.+++.+||+.||++|||+.|+++...+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 251 VQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp EECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred hhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 12345677899999999999999999999999988754
No 80
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=353.50 Aligned_cols=241 Identities=21% Similarity=0.312 Sum_probs=196.3
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|.. .++..||+|+++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGM--KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEccccc--ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 4699999999999986 4688999999976542 455778999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEe--CCCCceEEeecccccccCCCC--CC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL--GADFEARLTDYCLSVLSDSSS--VE 549 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill--~~~~~~kl~Dfgl~~~~~~~~--~~ 549 (665)
|.+++.. ....+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++....... ..
T Consensus 173 L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~ 247 (373)
T 2x4f_A 173 LFDRIID----ESYNLTELDTILFMKQICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV 247 (373)
T ss_dssp EHHHHHH----TGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCC
T ss_pred HHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccc
Confidence 9998864 2346899999999999999999999999 9999999999999 567899999999998765433 23
Q ss_pred CCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccC--CCchhhhHHHHHHHHH
Q 005999 550 DPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVD--DGREENRLGMLTEVAS 627 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~ 627 (665)
..||+.|+|||++. +..++.++|||||||++|||++|+.||.... ..+....+...... .......+..+.+|+.
T Consensus 248 ~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 324 (373)
T 2x4f_A 248 NFGTPEFLAPEVVN-YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN--DAETLNNILACRWDLEDEEFQDISEEAKEFIS 324 (373)
T ss_dssp CCSSCTTCCHHHHT-TCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHH
T ss_pred ccCCCcEeChhhcc-CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhccCCCChhhhccCCHHHHHHHH
Confidence 35899999999987 5678999999999999999999999997531 22222222222111 1123456778999999
Q ss_pred HcccCCCCCCCCHHHHHH
Q 005999 628 VCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 628 ~cl~~dP~~RPt~~evl~ 645 (665)
+||+.||++|||+.|+++
T Consensus 325 ~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 325 KLLIKEKSWRISASEALK 342 (373)
T ss_dssp TTSCSSGGGSCCHHHHHH
T ss_pred HHcCCChhhCCCHHHHhc
Confidence 999999999999999987
No 81
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.8e-40 Score=348.55 Aligned_cols=241 Identities=19% Similarity=0.208 Sum_probs=204.6
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
.+.||+|+||.||+|... +++.||+|++...... ....+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 125 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 367999999999999975 6889999998654321 23356788999999999999999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCCCCCC
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSVEDP 551 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 551 (665)
|+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++++||+|||++...........
T Consensus 126 g~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~ 199 (350)
T 1rdq_E 126 GEMFSHLRR-----IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC 199 (350)
T ss_dssp CBHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCE
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCccceEEECCCCCEEEcccccceeccCCccccc
Confidence 999999974 245899999999999999999999999 99999999999999999999999999987766655667
Q ss_pred CCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHccc
Q 005999 552 DTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSL 631 (665)
Q Consensus 552 gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 631 (665)
||+.|+|||++. +..++.++|||||||++|||++|+.||... ...++...+... ....+...+..+.+++.+||+
T Consensus 200 gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~lL~ 274 (350)
T 1rdq_E 200 GTPEALAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG--KVRFPSHFSSDLKDLLRNLLQ 274 (350)
T ss_dssp ECGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHC--CCCCCTTCCHHHHHHHHHHSC
T ss_pred CCccccCHHHhc-CCCCCCcCCEecccHhHhHHhhCCCCCCCC--CHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhh
Confidence 999999999987 567899999999999999999999999753 222333333322 222345567789999999999
Q ss_pred CCCCCCCC-----HHHHHH
Q 005999 632 KSPEQRPA-----MWQVLK 645 (665)
Q Consensus 632 ~dP~~RPt-----~~evl~ 645 (665)
.||++||+ +.|+++
T Consensus 275 ~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 275 VDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp SCTTTCTTSSTTTTHHHHT
T ss_pred cCHHhccCCccCCHHHHHh
Confidence 99999998 888875
No 82
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.6e-40 Score=335.53 Aligned_cols=251 Identities=20% Similarity=0.348 Sum_probs=209.9
Q ss_pred hHhCcccceEEEEEEEC---CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 395 ELLGRGSIGTTYKAVLD---NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
+.||+|+||.||+|... ++..||+|+++.... ....+.+.+|++++++++||||+++++++ ..+..++||||+++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~ 93 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGG 93 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccc-hhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCC
Confidence 36999999999999853 678899999976543 34567789999999999999999999999 45568999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC----
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS---- 547 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~---- 547 (665)
++|.+++.. ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 94 ~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 168 (287)
T 1u59_A 94 GPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168 (287)
T ss_dssp EEHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred CCHHHHHHh----CCccCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCchheEEEcCCCCEEECcccceeeeccCcceee
Confidence 999999964 2356899999999999999999999999 9999999999999999999999999997664322
Q ss_pred --CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHH
Q 005999 548 --VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTE 624 (665)
Q Consensus 548 --~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 624 (665)
....+|+.|+|||++. +..++.++||||||+++|||++ |+.||... ...++...+..... ...+...+..+.+
T Consensus 169 ~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~i~~~~~-~~~~~~~~~~l~~ 244 (287)
T 1u59_A 169 ARSAGKWPLKWYAPECIN-FRKFSSRSDVWSYGVTMWEALSYGQKPYKKM--KGPEVMAFIEQGKR-MECPPECPPELYA 244 (287)
T ss_dssp CCCSSCCCGGGCCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCTTTTC--CTHHHHHHHHTTCC-CCCCTTCCHHHHH
T ss_pred ccccccccccccCHHHhc-cCCCCchhhHHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHhcCCc-CCCCCCcCHHHHH
Confidence 1224678999999987 5678999999999999999998 99999763 23344444433221 2234567788999
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHHHHhhhcc
Q 005999 625 VASVCSLKSPEQRPAMWQVLKMIQEIKESVMA 656 (665)
Q Consensus 625 li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 656 (665)
++.+||+.||++||++.|+++.|+.+..+...
T Consensus 245 li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 245 LMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp HHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999887654
No 83
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=350.98 Aligned_cols=243 Identities=19% Similarity=0.280 Sum_probs=200.8
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCc-hhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|... +++.||+|++..... .....+.+.+|++++++++||||++++++|.+.+..++||||+.+|
T Consensus 21 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg 100 (384)
T 4fr4_A 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGG 100 (384)
T ss_dssp EEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCC
Confidence 67999999999999965 588999999865432 1234567889999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC--CCCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS--SVED 550 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~--~~~~ 550 (665)
+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||++...... ....
T Consensus 101 ~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~ 174 (384)
T 4fr4_A 101 DLRYHLQQ-----NVHFKEETVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTM 174 (384)
T ss_dssp EHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCC
T ss_pred cHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEECCCCCEEEeccceeeeccCCCceecc
Confidence 99999973 356999999999999999999999999 999999999999999999999999999766443 2345
Q ss_pred CCCCcccCCccccC--CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc-cHHHHHHhhccCCCchhhhHHHHHHHHH
Q 005999 551 PDTVAYKAPEIRKS--SRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP-DMLEWVRTMRVDDGREENRLGMLTEVAS 627 (665)
Q Consensus 551 ~gt~~y~aPE~~~~--~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~ 627 (665)
.||+.|+|||++.. +..++.++|||||||++|||++|+.||........ .+...+.. .....+...+..+.+++.
T Consensus 175 ~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~--~~~~~p~~~s~~~~~li~ 252 (384)
T 4fr4_A 175 AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET--TVVTYPSAWSQEMVSLLK 252 (384)
T ss_dssp CSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH--CCCCCCTTSCHHHHHHHH
T ss_pred CCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh--cccCCCCcCCHHHHHHHH
Confidence 69999999999863 34588999999999999999999999975432222 22222222 122234556778999999
Q ss_pred HcccCCCCCCCC-HHHHHH
Q 005999 628 VCSLKSPEQRPA-MWQVLK 645 (665)
Q Consensus 628 ~cl~~dP~~RPt-~~evl~ 645 (665)
+||+.||++||+ +.++++
T Consensus 253 ~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 253 KLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHSCSSGGGSCCSHHHHHT
T ss_pred HHhcCCHhHhcccHHHHHc
Confidence 999999999999 666654
No 84
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.7e-40 Score=370.09 Aligned_cols=251 Identities=21% Similarity=0.362 Sum_probs=208.6
Q ss_pred HhCcccceEEEEEEEC---CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 396 LLGRGSIGTTYKAVLD---NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 396 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
.||+|+||.||+|.+. ++..||||+++.... ....+.+.+|++++++++||||+++++++.. +..++||||+.+|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS-STTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 5999999999999863 677899999976532 3456789999999999999999999999976 5689999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCCC----
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSV---- 548 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~---- 548 (665)
+|.+++.. ....+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++........
T Consensus 421 ~L~~~l~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 421 PLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp BHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred cHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 99999974 2456899999999999999999999999 99999999999999999999999999976643221
Q ss_pred --CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHH
Q 005999 549 --EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEV 625 (665)
Q Consensus 549 --~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 625 (665)
...+++.|+|||++. +..++.++|||||||++|||++ |+.||... ...++...+..... ...+..++..+.++
T Consensus 496 ~~~~~~~~~y~APE~~~-~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~--~~~~~~~~i~~~~~-~~~p~~~~~~l~~l 571 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECIN-FRKFSSRSDVWSYGVTMWEALSYGQKPYKKM--KGPEVMAFIEQGKR-MECPPECPPELYAL 571 (613)
T ss_dssp ------CCTTSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CSHHHHHHHHTTCC-CCCCTTCCHHHHHH
T ss_pred ccCCCCccceeCHhhhc-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHcCCC-CCCCCcCCHHHHHH
Confidence 123467899999987 5679999999999999999998 99999763 23345544443322 22345677889999
Q ss_pred HHHcccCCCCCCCCHHHHHHHHHHHHhhhccc
Q 005999 626 ASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657 (665)
Q Consensus 626 i~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~ 657 (665)
+.+||+.||++||++.++++.|+.+..+....
T Consensus 572 i~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~ 603 (613)
T 2ozo_A 572 MSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 603 (613)
T ss_dssp HHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCS
T ss_pred HHHHcCCChhHCcCHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999998877653
No 85
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.1e-40 Score=340.06 Aligned_cols=251 Identities=23% Similarity=0.381 Sum_probs=212.0
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|... ++..||+|.+.... ...+.+.+|++++++++||||+++++++.+++..++||||+.+++
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 95 (288)
T 3kfa_A 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 95 (288)
T ss_dssp EESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEE
T ss_pred eecCCCCceeEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCc
Confidence 57999999999999976 47889999997544 445778999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCCC----C
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSV----E 549 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~----~ 549 (665)
|.+++... ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........ .
T Consensus 96 L~~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 171 (288)
T 3kfa_A 96 LLDYLREC---NRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171 (288)
T ss_dssp HHHHHHHC---CTTTSCHHHHHHHHHHHHHHHHHHHHHT-CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETT
T ss_pred HHHHHHhc---ccCCccHhHHHHHHHHHHHHHHHHHHCC-ccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccC
Confidence 99999753 3456899999999999999999999999 99999999999999999999999999977654321 1
Q ss_pred CCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHH
Q 005999 550 DPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASV 628 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 628 (665)
..+|+.|+|||.+. +..++.++||||||+++|||++ |+.||... ....+...+..... ...+...+..+.+++.+
T Consensus 172 ~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~ll~~g~~p~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~ 247 (288)
T 3kfa_A 172 AKFPIKWTAPESLA-YNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYR-MERPEGCPEKVYELMRA 247 (288)
T ss_dssp EEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CGGGHHHHHHTTCC-CCCCTTCCHHHHHHHHH
T ss_pred CccccCcCChhhhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHhccCC-CCCCCCCCHHHHHHHHH
Confidence 23577899999987 5678999999999999999999 99998763 23344444433222 22345667789999999
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHhhhcc
Q 005999 629 CSLKSPEQRPAMWQVLKMIQEIKESVMA 656 (665)
Q Consensus 629 cl~~dP~~RPt~~evl~~L~~~~~~~~~ 656 (665)
|++.||++|||+.|+++.|+.+..+...
T Consensus 248 ~l~~dp~~Rps~~~~~~~l~~~~~~~~~ 275 (288)
T 3kfa_A 248 CWQWNPSDRPSFAEIHQAFETMFQESSI 275 (288)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred HhCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999876543
No 86
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1e-39 Score=339.21 Aligned_cols=256 Identities=26% Similarity=0.377 Sum_probs=202.5
Q ss_pred HhHhCcccceEEEEEEEC----CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCC-----eEEE
Q 005999 394 AELLGRGSIGTTYKAVLD----NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKG-----ERLV 464 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~l 464 (665)
.+.||+|+||.||+|... .+..||+|+++.........+.+.+|+.++++++||||+++++++.+.+ ..++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 118 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV 118 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEE
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEE
Confidence 367999999999999853 4668999999876555566678999999999999999999999998755 3599
Q ss_pred EEEecCCCCHHHHHhcCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeeccccccc
Q 005999 465 IYDYQPNGSLFNLIHGSRS-IRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLS 543 (665)
Q Consensus 465 v~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~ 543 (665)
||||+++|+|.+++...+. .....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kl~Dfg~~~~~ 197 (313)
T 3brb_A 119 ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-FLHRDLAARNCMLRDDMTVCVADFGLSKKI 197 (313)
T ss_dssp EEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCSGGGEEECTTSCEEECSCSCC---
T ss_pred EEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEEeecCcceec
Confidence 9999999999999854322 23456999999999999999999999999 999999999999999999999999999765
Q ss_pred CCCC-----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhh
Q 005999 544 DSSS-----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREEN 617 (665)
Q Consensus 544 ~~~~-----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (665)
.... ....+++.|+|||.+. +..++.++||||||+++|||++ |+.||... ....+...+.... ....+..
T Consensus 198 ~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~-~~~~~~~ 273 (313)
T 3brb_A 198 YSGDYYRQGRIAKMPVKWIAIESLA-DRVYTSKSDVWAFGVTMWEIATRGMTPYPGV--QNHEMYDYLLHGH-RLKQPED 273 (313)
T ss_dssp -------------CCGGGSCHHHHH-SSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CGGGHHHHHHTTC-CCCCBTT
T ss_pred ccccccCcccccCCCccccCchhhc-CCCccchhhhHHHHHHHHHHHhcCCCCCccC--CHHHHHHHHHcCC-CCCCCcc
Confidence 4322 2234678899999987 5778999999999999999999 88998763 2234444333322 1223456
Q ss_pred hHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 618 RLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 618 ~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
.+..+.+++.+||+.||++|||+.++++.|+++.+..
T Consensus 274 ~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 274 CLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 6778999999999999999999999999999998764
No 87
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-40 Score=351.29 Aligned_cols=255 Identities=25% Similarity=0.367 Sum_probs=201.3
Q ss_pred hHhCcccceEEEEEEEC--C--eEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEe-CCeEEEEEEec
Q 005999 395 ELLGRGSIGTTYKAVLD--N--HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA-KGERLVIYDYQ 469 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~~ 469 (665)
+.||+|+||.||+|... + +..||+|.++.... ....+.+.+|+.++++++||||+++++++.. ++..++||||+
T Consensus 95 ~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~ 173 (373)
T 3c1x_A 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173 (373)
T ss_dssp EEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSC-SHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECC
T ss_pred cEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECC
Confidence 57999999999999853 2 34689999865432 3456789999999999999999999998754 56789999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC--
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-- 547 (665)
++|+|.+++.. ....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 174 ~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 248 (373)
T 3c1x_A 174 KHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 248 (373)
T ss_dssp TTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred CCCCHHHHHhh----cccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCccchheEEECCCCCEEEeeccccccccccccc
Confidence 99999999974 2346889999999999999999999999 9999999999999999999999999997553321
Q ss_pred -----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHH
Q 005999 548 -----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM 621 (665)
Q Consensus 548 -----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (665)
....+|+.|+|||++. +..++.++|||||||++|||++ |.+||.... ..+....+..... ...+...+..
T Consensus 249 ~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~--~~~~~~~~~~~~~-~~~p~~~~~~ 324 (373)
T 3c1x_A 249 SVHNKTGAKLPVKWMALESLQ-TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN--TFDITVYLLQGRR-LLQPEYCPDP 324 (373)
T ss_dssp ---------CCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--SSCHHHHHHTTCC-CCCCTTCCHH
T ss_pred cccccCCCCCcccccChHHhc-CCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC--HHHHHHHHHcCCC-CCCCCCCCHH
Confidence 2224678899999987 5678999999999999999999 677776532 2344444433222 1234456778
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcccCc
Q 005999 622 LTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDN 659 (665)
Q Consensus 622 l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~ 659 (665)
+.+++.+||+.||++|||+.|+++.|+++......+..
T Consensus 325 l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~~ 362 (373)
T 3c1x_A 325 LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHY 362 (373)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCCB
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccce
Confidence 99999999999999999999999999999987765543
No 88
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.5e-40 Score=373.81 Aligned_cols=249 Identities=20% Similarity=0.317 Sum_probs=207.5
Q ss_pred hHhCcccceEEEEEEE---CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 395 ELLGRGSIGTTYKAVL---DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
+.||+|+||.||+|.+ ..+..||||+++.........+.+.+|++++++++||||+++++++.. +..++||||+.+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4699999999999965 357899999998765545567889999999999999999999999965 458899999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC----
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS---- 547 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~---- 547 (665)
|+|.+++.. ...+++..++.|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 454 g~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 454 GPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp EEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred CCHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHHHHCC-EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 999999974 346899999999999999999999999 9999999999999999999999999997664322
Q ss_pred --CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHH
Q 005999 548 --VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTE 624 (665)
Q Consensus 548 --~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 624 (665)
....+|+.|+|||++. +..++.++|||||||++|||++ |+.||... ...++...+..... ...+..++..+.+
T Consensus 528 ~~~~~~~t~~y~APE~~~-~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~--~~~~~~~~i~~~~~-~~~p~~~~~~l~~ 603 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECIN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTAMLEKGER-MGCPAGCPREMYD 603 (635)
T ss_dssp -------CGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCC-CCCCTTCCHHHHH
T ss_pred cccCCCCceeeeChhhhc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC-CCCCCCCCHHHHH
Confidence 1123578899999987 6679999999999999999998 99999763 22244444443322 2334567788999
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 625 VASVCSLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 625 li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
++..||+.||++|||+.++++.|+++..++
T Consensus 604 li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 604 LMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp HHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999988764
No 89
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.9e-40 Score=342.44 Aligned_cols=247 Identities=20% Similarity=0.307 Sum_probs=190.6
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
.+.||+|+||.||+|... +++.||+|++..... ....+.+.+|++++++++||||+++++++.+++..++||||+. |
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~ 87 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-N 87 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-C
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-C
Confidence 467999999999999854 688999999975542 2334567899999999999999999999999999999999998 5
Q ss_pred CHHHHHhcCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC---CC
Q 005999 473 SLFNLIHGSRS-IRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS---SV 548 (665)
Q Consensus 473 sL~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~---~~ 548 (665)
+|.+++..... .....+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 88 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (317)
T 2pmi_A 88 DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFS 166 (317)
T ss_dssp BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCC
T ss_pred CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCC
Confidence 99998864321 12345899999999999999999999999 999999999999999999999999999765432 23
Q ss_pred CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhh-ccCC---------------
Q 005999 549 EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTM-RVDD--------------- 612 (665)
Q Consensus 549 ~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~-~~~~--------------- 612 (665)
...+|+.|+|||++.+...++.++|||||||++|||++|+.||.... ..+....+... ....
T Consensus 167 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 244 (317)
T 2pmi_A 167 SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN--DEEQLKLIFDIMGTPNESLWPSVTKLPKYNP 244 (317)
T ss_dssp CCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCTTTCGGGGGCTTCCT
T ss_pred CCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCChhHhhhhhhhhhccc
Confidence 34689999999998755578999999999999999999999997532 11222222111 1000
Q ss_pred ----------------CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 613 ----------------GREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 613 ----------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
......+..+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 245 NIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp TCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 001134567999999999999999999999986
No 90
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.2e-40 Score=346.48 Aligned_cols=244 Identities=23% Similarity=0.331 Sum_probs=200.3
Q ss_pred HhHhCcccceEEEEEEE-CCeEEEEEEEecCCCc-hhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 394 AELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|++++++++||||+++++++..++..++||||+.
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~- 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL- 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-
Confidence 35799999999999996 5789999999975532 23445678999999999999999999999999999999999997
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCCCCCC
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSVEDP 551 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 551 (665)
|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++...... ....
T Consensus 138 g~l~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-~~~~ 211 (348)
T 1u5q_A 138 GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-NSFV 211 (348)
T ss_dssp EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-CCCC
T ss_pred CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEeeccCceecCCC-Cccc
Confidence 5888887642 356899999999999999999999999 999999999999999999999999999766543 3346
Q ss_pred CCCcccCCccccC--CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 552 DTVAYKAPEIRKS--SRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 552 gt~~y~aPE~~~~--~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
||+.|+|||++.. ...++.++|||||||++|||++|+.||.... .......+.............+..+.+++.+|
T Consensus 212 gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 289 (348)
T 1u5q_A 212 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--AMSALYHIAQNESPALQSGHWSEYFRNFVDSC 289 (348)
T ss_dssp SCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHH
T ss_pred CCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence 8999999998742 4568999999999999999999999986531 11211122222222223345677899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 005999 630 SLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 630 l~~dP~~RPt~~evl~~ 646 (665)
|+.||++|||+.|+++.
T Consensus 290 l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 290 LQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp TCSSGGGSCCHHHHTTC
T ss_pred cccChhhCcCHHHHhhC
Confidence 99999999999999863
No 91
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=9.6e-40 Score=350.27 Aligned_cols=247 Identities=22% Similarity=0.311 Sum_probs=199.7
Q ss_pred hHhCcc--cceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 395 ELLGRG--SIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 395 ~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
+.||+| +||.||+|... +++.||||++..........+.+.+|+.++++++||||+++++++.+++..++||||+++
T Consensus 31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 110 (389)
T 3gni_B 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 110 (389)
T ss_dssp EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred ecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCC
Confidence 679999 99999999976 689999999987665556677889999999999999999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCC------
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDS------ 545 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~------ 545 (665)
|+|.+++... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||.+.....
T Consensus 111 ~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~ 186 (389)
T 3gni_B 111 GSAKDLICTH---FMDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQR 186 (389)
T ss_dssp CBHHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECS
T ss_pred CCHHHHHhhh---cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccccceeecccccccc
Confidence 9999999753 2345899999999999999999999999 99999999999999999999999998753311
Q ss_pred ----CCCCCCCCCcccCCccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhcc----------
Q 005999 546 ----SSVEDPDTVAYKAPEIRKSS-RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRV---------- 610 (665)
Q Consensus 546 ----~~~~~~gt~~y~aPE~~~~~-~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~---------- 610 (665)
......||+.|+|||++... ..++.++|||||||++|||++|+.||....... .+.........
T Consensus 187 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 265 (389)
T 3gni_B 187 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ-MLLEKLNGTVPCLLDTSTIPA 265 (389)
T ss_dssp CBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT-HHHHC----------------
T ss_pred ccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHhcCCCCcccccccccc
Confidence 12223688999999998743 568999999999999999999999997632221 11111100000
Q ss_pred ---------------------------------CCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005999 611 ---------------------------------DDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 611 ---------------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 646 (665)
........+..+.+|+.+||+.||++|||+.|+++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 266 EELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ----------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000123345679999999999999999999999863
No 92
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=7.2e-40 Score=342.86 Aligned_cols=242 Identities=19% Similarity=0.298 Sum_probs=193.8
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCC------------
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKG------------ 460 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------------ 460 (665)
.+.||+|+||.||+|... +++.||||++..... ....+.+.+|++++++++||||++++++|.+..
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~ 89 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIW 89 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCST-TTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC--
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhh
Confidence 367999999999999976 789999999975542 345678999999999999999999999986643
Q ss_pred ---------------------------------------------eEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHH
Q 005999 461 ---------------------------------------------ERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCL 495 (665)
Q Consensus 461 ---------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~ 495 (665)
..++||||+++|+|.+++.... .....++..++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~ 167 (332)
T 3qd2_B 90 LKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC--SLEDREHGVCL 167 (332)
T ss_dssp ------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC--SGGGSCHHHHH
T ss_pred hccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc--CccchhhHHHH
Confidence 3799999999999999998543 33456777899
Q ss_pred HHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC---------------CCCCCCCcccCCc
Q 005999 496 KIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS---------------VEDPDTVAYKAPE 560 (665)
Q Consensus 496 ~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~---------------~~~~gt~~y~aPE 560 (665)
.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ....||+.|+|||
T Consensus 168 ~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 246 (332)
T 3qd2_B 168 HIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPE 246 (332)
T ss_dssp HHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHH
T ss_pred HHHHHHHHHHHHHHhCC-eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChH
Confidence 99999999999999999 9999999999999999999999999997665431 2235899999999
Q ss_pred cccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHcccCCCCCCCCH
Q 005999 561 IRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSLKSPEQRPAM 640 (665)
Q Consensus 561 ~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 640 (665)
++. +..++.++|||||||++|||++|..|+.. ............ ........+..+.+++.+||+.||++|||+
T Consensus 247 ~~~-~~~~~~~~Di~slG~il~el~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 320 (332)
T 3qd2_B 247 QIH-GNNYSHKVDIFSLGLILFELLYSFSTQME----RVRIITDVRNLK-FPLLFTQKYPQEHMMVQDMLSPSPTERPEA 320 (332)
T ss_dssp HHH-CCCCCTHHHHHHHHHHHHHHHSCCCCHHH----HHHHHHHHHTTC-CCHHHHHHCHHHHHHHHHHHCSSGGGSCCH
T ss_pred Hhc-CCCCcchhhHHHHHHHHHHHHHcCCChhH----HHHHHHHhhccC-CCcccccCChhHHHHHHHHccCCCCcCCCH
Confidence 987 56789999999999999999998776422 011111111111 111233445678999999999999999999
Q ss_pred HHHHH
Q 005999 641 WQVLK 645 (665)
Q Consensus 641 ~evl~ 645 (665)
.|+++
T Consensus 321 ~~~l~ 325 (332)
T 3qd2_B 321 TDIIE 325 (332)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 99986
No 93
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-39 Score=334.31 Aligned_cols=255 Identities=24% Similarity=0.382 Sum_probs=208.0
Q ss_pred HhHhCcccceEEEEEEEC----CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeE-EEEEEe
Q 005999 394 AELLGRGSIGTTYKAVLD----NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGER-LVIYDY 468 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~lv~e~ 468 (665)
.+.||+|+||.||+|... ++..+|+|.+..... ....+.+.+|+.++++++||||+++++++.+.+.. ++|+||
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE-MQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeecccccc-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 367999999999999853 344799999875443 34567889999999999999999999999876654 999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC--
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS-- 546 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~-- 546 (665)
+.+|+|.+++.. ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 105 ~~~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 105 MCHGDLLQFIRS----PQRNPTVKDLISFGLQVARGMEYLAEQK-FVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp CTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred ccCCCHHHHHhc----cccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 999999999974 2456899999999999999999999999 999999999999999999999999999754332
Q ss_pred -----CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHH
Q 005999 547 -----SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM 621 (665)
Q Consensus 547 -----~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (665)
.....+|+.|+|||.+. +..++.++||||||+++|||++|..|+... ....++...+..... ...+...+..
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~ 256 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTALESLQ-TYRFTTKSDVWSFGVLLWELLTRGAPPYRH-IDPFDLTHFLAQGRR-LPQPEYCPDS 256 (298)
T ss_dssp GCSCCSSCTTCGGGGSCHHHHT-TCCCCHHHHHHHHHHHHHHHHHTSCCTTTT-SCGGGHHHHHHTTCC-CCCCTTCCHH
T ss_pred cccccCcCCCCCccccChhhhc-cCCCChhhchhhHHHHHHHHhhCCCCCCcc-CCHHHHHHHhhcCCC-CCCCccchHH
Confidence 12234688999999987 667899999999999999999966554332 223344444443322 2234456778
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhccc
Q 005999 622 LTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657 (665)
Q Consensus 622 l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~ 657 (665)
+.+++.+||+.||++|||+.|+++.|+++.+.....
T Consensus 257 l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 257 LYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999887544
No 94
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=9.1e-40 Score=342.99 Aligned_cols=259 Identities=22% Similarity=0.352 Sum_probs=209.9
Q ss_pred HhHhCcccceEEEEEEEC--------CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEE
Q 005999 394 AELLGRGSIGTTYKAVLD--------NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLV 464 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 464 (665)
.+.||+|+||.||+|... ++..||+|++..... ....+.+.+|+++++++ +||||+++++++.+++..++
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 118 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEE
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc-HHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEE
Confidence 367999999999999863 567899999976543 34566789999999999 99999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceE
Q 005999 465 IYDYQPNGSLFNLIHGSRSI-----------RAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEAR 533 (665)
Q Consensus 465 v~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~k 533 (665)
||||+++|+|.+++...+.. ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~k 197 (334)
T 2pvf_A 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMK 197 (334)
T ss_dssp EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEE
T ss_pred EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCccceEEEcCCCCEE
Confidence 99999999999999854321 1235899999999999999999999999 99999999999999999999
Q ss_pred EeecccccccCCCC-----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHh
Q 005999 534 LTDYCLSVLSDSSS-----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRT 607 (665)
Q Consensus 534 l~Dfgl~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~ 607 (665)
|+|||++....... ....+|+.|+|||++. +..++.++||||||+++|||++ |+.||... ...++...+..
T Consensus 198 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~~~~ 274 (334)
T 2pvf_A 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKE 274 (334)
T ss_dssp ECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHH
T ss_pred EccccccccccccccccccCCCCcccceeChHHhc-CCCcChHHHHHHHHHHHHHHHhCCCCCcCcC--CHHHHHHHHhc
Confidence 99999997665432 2234678899999987 5678999999999999999999 99999753 22233333333
Q ss_pred hccCCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcccC
Q 005999 608 MRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAED 658 (665)
Q Consensus 608 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~ 658 (665)
... ...+...+..+.+++.+||+.||++|||+.|+++.|+++......++
T Consensus 275 ~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~~ 324 (334)
T 2pvf_A 275 GHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEE 324 (334)
T ss_dssp TCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred CCC-CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccCc
Confidence 221 22344567789999999999999999999999999999987665443
No 95
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=338.67 Aligned_cols=243 Identities=22% Similarity=0.285 Sum_probs=197.3
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||||+++++
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 88 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTV 88 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEH
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCch
Confidence 57999999999999975 58899999997766555567788999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC---CCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS---VED 550 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~---~~~ 550 (665)
|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ...
T Consensus 89 l~~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 162 (311)
T 4agu_A 89 LHELDRY-----QRGVPEHLVKSITWQTLQAVNFCHKHN-CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE 162 (311)
T ss_dssp HHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred HHHHHhh-----hcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCC
Confidence 9998873 345899999999999999999999999 9999999999999999999999999997665332 234
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC------------------
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD------------------ 612 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~------------------ 612 (665)
.+|+.|+|||++.+...++.++||||||+++|||++|+.||.... ..+....+.......
T Consensus 163 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (311)
T 4agu_A 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS--DVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK 240 (311)
T ss_dssp ---GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCC
T ss_pred cCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhcccccccccccccccccccCc
Confidence 689999999998755678999999999999999999999997632 112222111111000
Q ss_pred --C---------chhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 613 --G---------REENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 613 --~---------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
. .....+..+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred CCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0 01245667899999999999999999999986
No 96
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-40 Score=347.20 Aligned_cols=258 Identities=22% Similarity=0.305 Sum_probs=204.7
Q ss_pred HhHhCcccceEEEEEEE------CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEE
Q 005999 394 AELLGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIY 466 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 466 (665)
.+.||+|+||.||+|.. .++..||+|++..... ....+.+.+|+.+++++ +||||+++++++...+..++||
T Consensus 50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 46799999999999986 3577899999975432 23456789999999999 9999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCC------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCC
Q 005999 467 DYQPNGSLFNLIHGSRSI------------------RAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA 528 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~ 528 (665)
||+++|+|.+++...+.. ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~ 207 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNVLVTH 207 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEEEET
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEEcC
Confidence 999999999999854321 0134899999999999999999999999 999999999999999
Q ss_pred CCceEEeecccccccCCCCC-----CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHH
Q 005999 529 DFEARLTDYCLSVLSDSSSV-----EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDML 602 (665)
Q Consensus 529 ~~~~kl~Dfgl~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~ 602 (665)
++.+||+|||++........ ...+|+.|+|||.+. +..++.++|||||||++|||+| |+.||..... ...+.
T Consensus 208 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~~~ 285 (344)
T 1rjb_A 208 GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF-EGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV-DANFY 285 (344)
T ss_dssp TTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-SHHHH
T ss_pred CCcEEeCCCccCcccccCccceeccCccCccCccCHHHhc-cCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc-HHHHH
Confidence 99999999999975543221 223578899999987 5678999999999999999998 9999976421 22333
Q ss_pred HHHHhhccCCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcc
Q 005999 603 EWVRTMRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMA 656 (665)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 656 (665)
..+.... ....+...+..+.+++.+||+.||++|||+.|+++.|+.+......
T Consensus 286 ~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 286 KLIQNGF-KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp HHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred HHHhcCC-CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 3333221 2223445677899999999999999999999999999998776543
No 97
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1e-40 Score=342.57 Aligned_cols=250 Identities=19% Similarity=0.320 Sum_probs=198.7
Q ss_pred hHhCcccceEEEEEEECC--------eEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEE
Q 005999 395 ELLGRGSIGTTYKAVLDN--------HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIY 466 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 466 (665)
+.||+|+||.||+|.... +..||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeccCCCceEEEEEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEE
Confidence 579999999999998543 2579999986543 245677999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCc--------eEEeecc
Q 005999 467 DYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFE--------ARLTDYC 538 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~--------~kl~Dfg 538 (665)
||+++|+|.+++... ...+++..++.++.||+.||+|||+++ |+||||||+||+++.++. +||+|||
T Consensus 92 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg 166 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKN----KNCINILWKLEVAKQLAAAMHFLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166 (289)
T ss_dssp ECCTTCBHHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred ECCCCCCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHhhCC-eECCCcCcceEEEecCCcccccccceeeeccCc
Confidence 999999999999852 344899999999999999999999999 999999999999998887 9999999
Q ss_pred cccccCCCCCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhh
Q 005999 539 LSVLSDSSSVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENR 618 (665)
Q Consensus 539 l~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (665)
++....... ...+|+.|+|||++.....++.++|||||||++|||++|..|+.... ......... ......+...
T Consensus 167 ~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-~~~~~~~~~---~~~~~~~~~~ 241 (289)
T 4fvq_A 167 ISITVLPKD-ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-DSQRKLQFY---EDRHQLPAPK 241 (289)
T ss_dssp SCTTTSCHH-HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-CHHHHHHHH---HTTCCCCCCS
T ss_pred ccccccCcc-ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-chHHHHHHh---hccCCCCCCC
Confidence 986553321 12368889999998744678999999999999999999655443321 111111111 1122223334
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcc
Q 005999 619 LGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMA 656 (665)
Q Consensus 619 ~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 656 (665)
+..+.+++.+||+.||++|||+.|+++.|+++......
T Consensus 242 ~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 242 AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 55689999999999999999999999999988776544
No 98
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=9.1e-40 Score=344.08 Aligned_cols=237 Identities=21% Similarity=0.282 Sum_probs=195.8
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCc-hhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKT-ADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
+.||+|+||.||+|... +++.||+|++..... .....+.+.+|..++.++ +||||+++++++.+.+..++||||+++
T Consensus 15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~g 94 (345)
T 3a8x_A 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 94 (345)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCC
Confidence 67999999999999975 688999999976543 233456788899999887 899999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCC---CCC
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDS---SSV 548 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~---~~~ 548 (665)
|+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++++||+|||++..... ...
T Consensus 95 g~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~ 168 (345)
T 3a8x_A 95 GDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 168 (345)
T ss_dssp CBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBC
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEEeccccccccCCCCccc
Confidence 999999974 245899999999999999999999999 99999999999999999999999999975322 223
Q ss_pred CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCC----c---cHHHHHHhhccCCCchhhhHHH
Q 005999 549 EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP----P---DMLEWVRTMRVDDGREENRLGM 621 (665)
Q Consensus 549 ~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~ 621 (665)
...||+.|+|||++. +..++.++|||||||++|||++|+.||....... . .+...+.. .....+...+..
T Consensus 169 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~s~~ 245 (345)
T 3a8x_A 169 TFCGTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVK 245 (345)
T ss_dssp CCCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH--CCCCCCTTSCHH
T ss_pred ccCCCccccCccccC-CCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc--CCCCCCCCCCHH
Confidence 446899999999987 5678999999999999999999999997532111 1 11222221 122234556778
Q ss_pred HHHHHHHcccCCCCCCCCH
Q 005999 622 LTEVASVCSLKSPEQRPAM 640 (665)
Q Consensus 622 l~~li~~cl~~dP~~RPt~ 640 (665)
+.+++.+||+.||++||++
T Consensus 246 ~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 246 AASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp HHHHHHHHTCSSTTTSTTC
T ss_pred HHHHHHHHhcCCHhHCCCC
Confidence 9999999999999999995
No 99
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-39 Score=340.83 Aligned_cols=251 Identities=19% Similarity=0.381 Sum_probs=203.7
Q ss_pred hHhCcccceEEEEEEECC-----eEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEec
Q 005999 395 ELLGRGSIGTTYKAVLDN-----HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQ 469 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 469 (665)
+.||+|+||.||+|.... +..||+|+++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 50 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 128 (333)
T 1mqb_A 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT-EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128 (333)
T ss_dssp EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred cEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCC
Confidence 679999999999998542 35699999976543 344567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC--
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-- 547 (665)
++|+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 129 ~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 203 (333)
T 1mqb_A 129 ENGALDKFLREK----DGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 203 (333)
T ss_dssp TTEEHHHHHHHT----TTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred CCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChheEEECCCCcEEECCCCcchhhcccccc
Confidence 999999999752 356899999999999999999999999 9999999999999999999999999997654322
Q ss_pred ----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHH
Q 005999 548 ----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGML 622 (665)
Q Consensus 548 ----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 622 (665)
....+|+.|+|||++. +..++.++|||||||++|||++ |+.||... ...++...+..... .......+..+
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~pf~~~--~~~~~~~~~~~~~~-~~~~~~~~~~l 279 (333)
T 1mqb_A 204 TYTTSGGKIPIRWTAPEAIS-YRKFTSASDVWSFGIVMWEVMTYGERPYWEL--SNHEVMKAINDGFR-LPTPMDCPSAI 279 (333)
T ss_dssp -------CCCGGGSCHHHHH-SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTCC-CCCCTTCBHHH
T ss_pred ccccCCCCccccccCchhcc-cCCCCchhhhHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHCCCc-CCCcccCCHHH
Confidence 1123577899999987 5678999999999999999999 99999653 22233333332211 12344567789
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhc
Q 005999 623 TEVASVCSLKSPEQRPAMWQVLKMIQEIKESVM 655 (665)
Q Consensus 623 ~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 655 (665)
.+++.+||+.||++||++.|+++.|+.+.....
T Consensus 280 ~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 280 YQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 999999999999999999999999999887654
No 100
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.3e-39 Score=336.06 Aligned_cols=253 Identities=25% Similarity=0.378 Sum_probs=204.4
Q ss_pred hHhCcccceEEEEEEECC----eEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEE-eCCeEEEEEEec
Q 005999 395 ELLGRGSIGTTYKAVLDN----HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ-AKGERLVIYDYQ 469 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~ 469 (665)
+.||+|+||.||+|...+ ...+|+|.+..... ....+.+.+|+.++++++||||+++++++. .++..++||||+
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 109 (298)
T 3f66_A 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 109 (298)
T ss_dssp EEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECC
T ss_pred ceeeecCCceEEEEEEecCCCceeEEEEEecccCCC-HHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCC
Confidence 679999999999998542 23689999876443 345577899999999999999999999864 456889999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC--
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-- 547 (665)
.+|+|.+++.. ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 110 ~~~~L~~~l~~----~~~~~~~~~~~~i~~ql~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 184 (298)
T 3f66_A 110 KHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 184 (298)
T ss_dssp TTCBHHHHHHC----TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGC
T ss_pred CCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEECCCCCEEECcccccccccccchh
Confidence 99999999974 2456899999999999999999999999 9999999999999999999999999997654322
Q ss_pred -----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHH
Q 005999 548 -----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM 621 (665)
Q Consensus 548 -----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (665)
....+|+.|+|||.+. +..++.++||||||+++|||++ |.+||... ...+....+...... ..+...+..
T Consensus 185 ~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~ 260 (298)
T 3f66_A 185 SVHNKTGAKLPVKWMALESLQ-TQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--NTFDITVYLLQGRRL-LQPEYCPDP 260 (298)
T ss_dssp BC-----CCBCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS--CTTTHHHHHHTTCCC-CCCTTCCHH
T ss_pred ccccccCCCCCccccChHHhc-CCCCChHHHHHHHHHHHHHHHhCCCCCCccC--CHHHHHHHHhcCCCC-CCCccCCHH
Confidence 2234678899999987 5678999999999999999999 55566542 222333333322221 234456778
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhccc
Q 005999 622 LTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657 (665)
Q Consensus 622 l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~ 657 (665)
+.+++.+||+.||++|||+.|+++.|+++......+
T Consensus 261 l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~ 296 (298)
T 3f66_A 261 LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 296 (298)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCS
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 999999999999999999999999999998876544
No 101
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.8e-40 Score=362.64 Aligned_cols=248 Identities=26% Similarity=0.437 Sum_probs=203.5
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCCH
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 474 (665)
+.||+|+||.||+|.+.++..||||+++... ...+.|.+|++++++++||||+++++++.+ +..++||||+++|+|
T Consensus 190 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL 265 (452)
T 1fmk_A 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 265 (452)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBH
T ss_pred eeecCCCCeEEEEEEECCCceEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCH
Confidence 5799999999999999888889999997654 235678999999999999999999999876 678999999999999
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC----CCC
Q 005999 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS----VED 550 (665)
Q Consensus 475 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~----~~~ 550 (665)
.+++... ....+++..++.++.||+.||+|||+++ |+||||||+|||+++++.+||+|||++....... ...
T Consensus 266 ~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 341 (452)
T 1fmk_A 266 LDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 341 (452)
T ss_dssp HHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC-------------
T ss_pred HHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCC
Confidence 9999742 2245899999999999999999999999 9999999999999999999999999997664322 122
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
.++..|+|||++. ...++.++|||||||++|||++ |+.||... ...++...+..... ...+..++..+.+++.+|
T Consensus 342 ~~~~~y~aPE~~~-~~~~~~~sDvwslG~~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~-~~~~~~~~~~l~~li~~c 417 (452)
T 1fmk_A 342 KFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM--VNREVLDQVERGYR-MPCPPECPESLHDLMCQC 417 (452)
T ss_dssp -CCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCC-CCCCTTSCHHHHHHHHHH
T ss_pred cccccccCHhHHh-cCCCCccccHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHH
Confidence 4678899999987 5679999999999999999999 99999753 22233333332211 123456778899999999
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 630 SLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 630 l~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
|+.||++|||+.++++.|+++....
T Consensus 418 l~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 418 WRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp TCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred ccCChhhCcCHHHHHHHHHHHhccC
Confidence 9999999999999999999886554
No 102
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-39 Score=339.41 Aligned_cols=247 Identities=23% Similarity=0.342 Sum_probs=194.9
Q ss_pred HhHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhC--CCCCCeeeeeEEEEeC----CeEEEEEE
Q 005999 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGG--LSHPNLVPIRAYFQAK----GERLVIYD 467 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~----~~~~lv~e 467 (665)
.+.||+|+||.||+|... ++.||||++.... ...+..|.+++.. ++||||+++++++... ...++|||
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 115 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE-----EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITD 115 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEEC
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEeccc-----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEe
Confidence 468999999999999876 7789999985432 2233444555544 4999999999999887 78999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCeeccCCCCCceEeCCCCceEEeeccc
Q 005999 468 YQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA--------SWLIHGNLKSSNVLLGADFEARLTDYCL 539 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~--------~~iiH~Dlk~~Nill~~~~~~kl~Dfgl 539 (665)
|+++|+|.++++. ..+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+
T Consensus 116 ~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kl~Dfg~ 188 (337)
T 3mdy_A 116 YHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGL 188 (337)
T ss_dssp CCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ccCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-EEecccchHHEEECCCCCEEEEeCCC
Confidence 9999999999974 3589999999999999999999998 7 99999999999999999999999999
Q ss_pred ccccCCCC-------CCCCCCCcccCCccccCCCCCCCc------chHHHHHHHHHHHHhC----------CCCCCCCCC
Q 005999 540 SVLSDSSS-------VEDPDTVAYKAPEIRKSSRRATSK------SDVYAFGVLLLELLTG----------KHPSQHPYL 596 (665)
Q Consensus 540 ~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~k------~DvwSlGvvl~elltg----------~~P~~~~~~ 596 (665)
+....... ....||+.|+|||++. +...+.+ +|||||||++|||++| +.||.....
T Consensus 189 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~ 267 (337)
T 3mdy_A 189 AVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVP 267 (337)
T ss_dssp CEECC---------CCSSCSCGGGCCHHHHT-TCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred ceeeccccccccCCCCCCccCcceeChhhcc-cccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcC
Confidence 96554322 1336899999999987 3444444 9999999999999999 666665433
Q ss_pred CCccHHHHHHhhccC---CC-----chhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 597 APPDMLEWVRTMRVD---DG-----REENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 597 ~~~~~~~~~~~~~~~---~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
............... .. ....++..+.+++.+||+.||++|||+.|+++.|+.+.++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 268 SDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 333322222221111 11 12366788999999999999999999999999999998764
No 103
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=350.31 Aligned_cols=240 Identities=22% Similarity=0.286 Sum_probs=197.4
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCc-hhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKT-ADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
+.||+|+||.||+|... +++.||+|+++.... .....+.+.+|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~g 108 (353)
T 3txo_A 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNG 108 (353)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCC
Confidence 67999999999999965 688999999975432 123456678899999888 799999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC---CC
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS---SV 548 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~---~~ 548 (665)
|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||++...... ..
T Consensus 109 g~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~ 182 (353)
T 3txo_A 109 GDLMFHIQK-----SRRFDEARARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTA 182 (353)
T ss_dssp CBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC------
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCHHHEEECCCCCEEEccccceeecccCCcccc
Confidence 999999974 346899999999999999999999999 999999999999999999999999999754322 23
Q ss_pred CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHH
Q 005999 549 EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASV 628 (665)
Q Consensus 549 ~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 628 (665)
...||+.|+|||++. +..++.++|||||||++|||++|+.||... ...++...+... ....+...+..+.+++.+
T Consensus 183 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~G~~Pf~~~--~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~ 257 (353)
T 3txo_A 183 TFCGTPDYIAPEILQ-EMLYGPAVDWWAMGVLLYEMLCGHAPFEAE--NEDDLFEAILND--EVVYPTWLHEDATGILKS 257 (353)
T ss_dssp ---CCGGGCCHHHHH-HHHCTTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHC--CCCCCTTSCHHHHHHHHH
T ss_pred ccCCCcCeEChhhcC-CCCcCCccCCCcchHHHHHHHhCCCCCCCC--CHHHHHHHHHcC--CCCCCCCCCHHHHHHHHH
Confidence 346899999999987 567899999999999999999999999753 222333333322 222344567789999999
Q ss_pred cccCCCCCCCCH------HHHHH
Q 005999 629 CSLKSPEQRPAM------WQVLK 645 (665)
Q Consensus 629 cl~~dP~~RPt~------~evl~ 645 (665)
||+.||++||++ .|+++
T Consensus 258 lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 258 FMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HTCSSGGGSTTSGGGTCTHHHHT
T ss_pred HhhhCHHHccCCcccCCHHHHhh
Confidence 999999999998 67765
No 104
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=7.8e-40 Score=334.28 Aligned_cols=249 Identities=25% Similarity=0.427 Sum_probs=206.2
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCCH
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 474 (665)
+.||+|+||.||+|...++..||+|++.... ...+.+.+|++++++++||||+++++++.. +..++||||+++++|
T Consensus 19 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L 94 (279)
T 1qpc_A 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSL 94 (279)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBH
T ss_pred eeecCCCCeEEEEEEEcCCcEEEEEEecCCc---ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCCCCCH
Confidence 5799999999999999888899999997654 235678999999999999999999999864 468999999999999
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC----CCC
Q 005999 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS----VED 550 (665)
Q Consensus 475 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~----~~~ 550 (665)
.+++... ....+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++....... ...
T Consensus 95 ~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 170 (279)
T 1qpc_A 95 VDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 170 (279)
T ss_dssp HHHTTSH---HHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTC
T ss_pred HHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCC
Confidence 9998632 1236899999999999999999999999 9999999999999999999999999997665432 223
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
.++..|+|||++. +..++.++||||||+++|||++ |+.||... ...+....+.... ....+...+..+.+++.+|
T Consensus 171 ~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~ 246 (279)
T 1qpc_A 171 KFPIKWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTHGRIPYPGM--TNPEVIQNLERGY-RMVRPDNCPEELYQLMRLC 246 (279)
T ss_dssp CCCTTTSCHHHHH-HCEECHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHH
T ss_pred CCccCccChhhhc-cCCCCchhhhHHHHHHHHHHHhCCCCCCccc--CHHHHHHHHhccc-CCCCcccccHHHHHHHHHH
Confidence 4678899999987 5678999999999999999999 99998753 2223333332221 1123445677899999999
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHhhhc
Q 005999 630 SLKSPEQRPAMWQVLKMIQEIKESVM 655 (665)
Q Consensus 630 l~~dP~~RPt~~evl~~L~~~~~~~~ 655 (665)
++.||++|||+.++++.|+++.....
T Consensus 247 l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 247 WKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred hccChhhCCCHHHHHHHHHHHHHhcc
Confidence 99999999999999999999987643
No 105
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=6.6e-40 Score=350.20 Aligned_cols=237 Identities=21% Similarity=0.283 Sum_probs=193.7
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
+.||+|+||.||+|... +++.||+|+++..... ....+.+.+|..++.++ +||||++++++|.+.+..++||||+++
T Consensus 58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~g 137 (396)
T 4dc2_A 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 137 (396)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCC
Confidence 67999999999999965 6889999999765322 22334577888888776 899999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccC---CCCC
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSD---SSSV 548 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~---~~~~ 548 (665)
|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||+++... ....
T Consensus 138 g~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~ 211 (396)
T 4dc2_A 138 GDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 211 (396)
T ss_dssp CBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEECCCCCEEEeecceeeecccCCCccc
Confidence 999999974 346899999999999999999999999 9999999999999999999999999997532 2233
Q ss_pred CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCC---c----cHHHHHHhhccCCCchhhhHHH
Q 005999 549 EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP---P----DMLEWVRTMRVDDGREENRLGM 621 (665)
Q Consensus 549 ~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~ 621 (665)
...||+.|+|||++. +..++.++|||||||++|||++|+.||....... . .+...+.. .....+...+..
T Consensus 212 ~~~gt~~Y~aPE~l~-~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~s~~ 288 (396)
T 4dc2_A 212 TFCGTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVK 288 (396)
T ss_dssp CCCBCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCCTTSCHH
T ss_pred cccCCcccCCchhhc-CCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCCCcCCHH
Confidence 446899999999987 6778999999999999999999999996432111 1 12222222 222344556778
Q ss_pred HHHHHHHcccCCCCCCCCH
Q 005999 622 LTEVASVCSLKSPEQRPAM 640 (665)
Q Consensus 622 l~~li~~cl~~dP~~RPt~ 640 (665)
+.+++.+||+.||++||++
T Consensus 289 ~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 289 AASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHHHHHHHTCSCTTTSTTC
T ss_pred HHHHHHHHhcCCHhHcCCC
Confidence 9999999999999999995
No 106
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-40 Score=351.37 Aligned_cols=243 Identities=20% Similarity=0.311 Sum_probs=201.9
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
.+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++.+.+..++||||+.+|
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg 133 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP--LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGG 133 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCC
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccch--hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCC
Confidence 367999999999999965 688999999876542 34567899999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCC--CCceEEeecccccccCCCC--C
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA--DFEARLTDYCLSVLSDSSS--V 548 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~--~~~~kl~Dfgl~~~~~~~~--~ 548 (665)
+|.+++.. ....+++..++.++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||++....... .
T Consensus 134 ~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~ 208 (387)
T 1kob_A 134 ELFDRIAA----EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK 208 (387)
T ss_dssp BHHHHTTC----TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE
T ss_pred cHHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccchHHeEEecCCCCceEEEecccceecCCCccee
Confidence 99999874 2346899999999999999999999999 999999999999974 4789999999997765432 2
Q ss_pred CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccC--CCchhhhHHHHHHHH
Q 005999 549 EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVD--DGREENRLGMLTEVA 626 (665)
Q Consensus 549 ~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li 626 (665)
...||+.|+|||++. +..++.++|||||||++|||++|+.||... ...+....+...... .......+..+.+++
T Consensus 209 ~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 285 (387)
T 1kob_A 209 VTTATAEFAAPEIVD-REPVGFYTDMWAIGVLGYVLLSGLSPFAGE--DDLETLQNVKRCDWEFDEDAFSSVSPEAKDFI 285 (387)
T ss_dssp EECSSGGGCCHHHHT-TCCBCHHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHH
T ss_pred eeccCCCccCchhcc-CCCCCCcccEeeHhHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCCccccccCCHHHHHHH
Confidence 235899999999987 567899999999999999999999999753 122333333322211 122345677899999
Q ss_pred HHcccCCCCCCCCHHHHHHH
Q 005999 627 SVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 627 ~~cl~~dP~~RPt~~evl~~ 646 (665)
.+||+.||++|||+.|+++.
T Consensus 286 ~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 286 KNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp HTTSCSSGGGSCCHHHHHTS
T ss_pred HHHcCCChhHCcCHHHHhhC
Confidence 99999999999999999873
No 107
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5.7e-40 Score=336.07 Aligned_cols=243 Identities=22% Similarity=0.329 Sum_probs=203.7
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|... ++..||+|++..........+.+.+|++++++++||||+++++++.+++..++||||+.+++
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 91 (284)
T 3kk8_A 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 91 (284)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCC
Confidence 57999999999999965 58899999997765555566788999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCc---eEEeecccccccCCCCC--
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFE---ARLTDYCLSVLSDSSSV-- 548 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~---~kl~Dfgl~~~~~~~~~-- 548 (665)
|.+.+.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++........
T Consensus 92 l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (284)
T 3kk8_A 92 LFEDIVA-----REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 165 (284)
T ss_dssp HHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCC
T ss_pred HHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcccc
Confidence 9998874 346899999999999999999999999 999999999999986655 99999999976654332
Q ss_pred CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC--CchhhhHHHHHHHH
Q 005999 549 EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD--GREENRLGMLTEVA 626 (665)
Q Consensus 549 ~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li 626 (665)
...+|+.|+|||++. +..++.++||||||+++|||++|+.||... ........+....... ......+..+.+++
T Consensus 166 ~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 242 (284)
T 3kk8_A 166 GFAGTPGYLSPEVLK-KDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 242 (284)
T ss_dssp CSCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHH
T ss_pred CCCCCcCCcCchhhc-CCCCCcccchHHHHHHHHHHHHCCCCCCCC--chhHHHHHHHhccccCCchhhcccCHHHHHHH
Confidence 346899999999987 567899999999999999999999999652 2223333333322221 12235667899999
Q ss_pred HHcccCCCCCCCCHHHHHHH
Q 005999 627 SVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 627 ~~cl~~dP~~RPt~~evl~~ 646 (665)
.+||+.||++|||+.|+++.
T Consensus 243 ~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 243 DSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp HHHSCSSTTTSCCHHHHTTS
T ss_pred HHHcccChhhCCCHHHHhcC
Confidence 99999999999999999873
No 108
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=6.2e-40 Score=341.82 Aligned_cols=254 Identities=23% Similarity=0.355 Sum_probs=207.2
Q ss_pred hHhCcccceEEEEEEEC-----CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeC--CeEEEEEE
Q 005999 395 ELLGRGSIGTTYKAVLD-----NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAK--GERLVIYD 467 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 467 (665)
+.||+|+||.||++.+. +++.||||++..... ....+.+.+|++++++++||||+++++++.+. ...++|||
T Consensus 37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 115 (318)
T 3lxp_A 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG-PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115 (318)
T ss_dssp EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEEC
T ss_pred heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccC-hHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEe
Confidence 67999999999998753 688999999976543 34567789999999999999999999999874 57899999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC
Q 005999 468 YQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 547 (665)
|+++|+|.+++.. ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 116 ~~~~~~L~~~l~~------~~~~~~~~~~i~~~l~~~l~~LH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 188 (318)
T 3lxp_A 116 YVPLGSLRDYLPR------HSIGLAQLLLFAQQICEGMAYLHAQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188 (318)
T ss_dssp CCTTCBHHHHGGG------SCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred cccCCcHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence 9999999999974 24899999999999999999999999 9999999999999999999999999997765432
Q ss_pred ------CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCC--------Cc--cHHHHHHhh--c
Q 005999 548 ------VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLA--------PP--DMLEWVRTM--R 609 (665)
Q Consensus 548 ------~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~--------~~--~~~~~~~~~--~ 609 (665)
....+|..|+|||++. +..++.++||||||+++|||++|+.||...... .. ......... .
T Consensus 189 ~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 189 EYYRVREDGDSPVFWYAPECLK-EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp SEEEC---CCCCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred cccccccCCCCCceeeChHHhc-CCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 2234788899999987 567889999999999999999999998652110 00 111111111 1
Q ss_pred cCCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhccc
Q 005999 610 VDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657 (665)
Q Consensus 610 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~ 657 (665)
.....+...+..+.+++.+||+.||++|||+.|+++.|+.+.+.....
T Consensus 268 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 268 ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 111234566788999999999999999999999999999998877643
No 109
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=5e-40 Score=339.62 Aligned_cols=251 Identities=20% Similarity=0.318 Sum_probs=201.8
Q ss_pred hHhCcccceEEEEEEE-----CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeC--CeEEEEEE
Q 005999 395 ELLGRGSIGTTYKAVL-----DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAK--GERLVIYD 467 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 467 (665)
+.||+|+||.||+|.+ .+++.||+|++..... ....+.+.+|++++++++||||+++++++... ...++|||
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 105 (302)
T 4e5w_A 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105 (302)
T ss_dssp EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEE
T ss_pred hccCCCCceEEEEEEEccccCccCeEEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEE
Confidence 5799999999999984 4688999999975542 23456789999999999999999999999876 66899999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC
Q 005999 468 YQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 547 (665)
|+++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 106 ~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 180 (302)
T 4e5w_A 106 FLPSGSLKEYLPKN----KNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180 (302)
T ss_dssp CCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred eCCCCcHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHhhcCC-cccCCCchheEEEcCCCCEEECcccccccccCCC
Confidence 99999999999642 345899999999999999999999999 9999999999999999999999999997665432
Q ss_pred ------CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC----------CCCccHHHHHHhhcc-
Q 005999 548 ------VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY----------LAPPDMLEWVRTMRV- 610 (665)
Q Consensus 548 ------~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~----------~~~~~~~~~~~~~~~- 610 (665)
....+|..|+|||++. +..++.++||||||+++|||++|+.|+.... ...............
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (302)
T 4e5w_A 181 EYYTVKDDRDSPVFWYAPECLM-QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG 259 (302)
T ss_dssp CEEECCCCTTCCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTT
T ss_pred cceeccCCCCCCccccCCeeec-CCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhcc
Confidence 2335788899999987 5678899999999999999999999864321 111112222222111
Q ss_pred -CCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHh
Q 005999 611 -DDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKE 652 (665)
Q Consensus 611 -~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 652 (665)
....+...+..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 260 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~ 302 (302)
T 4e5w_A 260 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302 (302)
T ss_dssp CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 112344567789999999999999999999999999998753
No 110
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.3e-40 Score=346.09 Aligned_cols=243 Identities=17% Similarity=0.274 Sum_probs=196.0
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCC--CCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSH--PNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||++...+++.||||++..........+.+.+|+.++++++| +||+++++++.+++..++||| +.+|
T Consensus 15 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~ 93 (343)
T 3dbq_A 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI 93 (343)
T ss_dssp EEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCSE
T ss_pred EEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCCC
Confidence 6799999999999998889999999998766555667889999999999976 999999999999999999999 5678
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC-----
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS----- 547 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~----- 547 (665)
+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||++.......
T Consensus 94 ~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~-iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~ 166 (343)
T 3dbq_A 94 DLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVK 166 (343)
T ss_dssp EHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCCC---------
T ss_pred CHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEE-CCcEEEeecccccccCcccccccC
Confidence 99999984 346899999999999999999999999 99999999999997 6789999999997664332
Q ss_pred CCCCCCCcccCCccccC----------CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhh
Q 005999 548 VEDPDTVAYKAPEIRKS----------SRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREEN 617 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~----------~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (665)
....||+.|+|||++.. ...++.++|||||||++|||++|+.||.........+...+ ........+..
T Consensus 167 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~ 245 (343)
T 3dbq_A 167 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII-DPNHEIEFPDI 245 (343)
T ss_dssp ---CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH-CTTSCCCCCCC
T ss_pred CCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHh-cCCcccCCccc
Confidence 23358999999999752 25688999999999999999999999975321111111111 11112223444
Q ss_pred hHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005999 618 RLGMLTEVASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 618 ~~~~l~~li~~cl~~dP~~RPt~~evl~~ 646 (665)
.+..+.+++.+||+.||++|||+.|+++.
T Consensus 246 ~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 246 PEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 55679999999999999999999999874
No 111
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.1e-40 Score=345.24 Aligned_cols=249 Identities=22% Similarity=0.316 Sum_probs=200.7
Q ss_pred hHhCcccceEEEEEEEC-CeE----EEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEec
Q 005999 395 ELLGRGSIGTTYKAVLD-NHL----IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQ 469 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 469 (665)
+.||+|+||.||+|... ++. .|++|.+..... ....+.+.+|+.++++++||||+++++++. ++..++||||+
T Consensus 19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 96 (325)
T 3kex_A 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYL 96 (325)
T ss_dssp EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS-CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECC
T ss_pred eeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeC
Confidence 67999999999999864 343 378888754332 223345678999999999999999999986 45688999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC--
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-- 547 (665)
.+|+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 97 ~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 171 (325)
T 3kex_A 97 PLGSLLDHVRQH----RGALGPQLLLNWGVQIAKGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171 (325)
T ss_dssp TTCBSHHHHHSS----GGGSCTTHHHHHHHHHHHHHHHHHHTT-CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTC
T ss_pred CCCCHHHHHHHc----cccCCHHHHHHHHHHHHHHHHHHHhCC-CCCCccchheEEECCCCeEEECCCCcccccCccccc
Confidence 999999999742 346889999999999999999999999 9999999999999999999999999998764432
Q ss_pred ---CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHH
Q 005999 548 ---VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLT 623 (665)
Q Consensus 548 ---~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 623 (665)
....+|..|+|||++. +..++.++|||||||++|||++ |+.||... ...++...+..... ...+...+..+.
T Consensus 172 ~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~ 247 (325)
T 3kex_A 172 LLYSEAKTPIKWMALESIH-FGKYTHQSDVWSYGVTVWELMTFGAEPYAGL--RLAEVPDLLEKGER-LAQPQICTIDVY 247 (325)
T ss_dssp CC-----CCTTTSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS--CTTHHHHHHHTTCB-CCCCTTBCTTTT
T ss_pred ccccCCCCcccccChHHhc-cCCCChhhHhHHhHHHHHHHHhCCCCCcccc--CHHHHHHHHHcCCC-CCCCCcCcHHHH
Confidence 2234678999999987 5679999999999999999999 99999763 22344444433222 122334556788
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 624 EVASVCSLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 624 ~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
+++.+||+.||++|||+.|+++.|+.+....
T Consensus 248 ~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 248 MVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp HHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999986543
No 112
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.2e-40 Score=345.83 Aligned_cols=241 Identities=20% Similarity=0.318 Sum_probs=197.5
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|+++++.++||||+++++++.+.+..++||||+ +|
T Consensus 15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g 93 (336)
T 3h4j_B 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GG 93 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CE
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CC
Confidence 6799999999999996 57889999998643221 122356889999999999999999999999999999999999 78
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC--CCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS--VED 550 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~--~~~ 550 (665)
+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++....... ...
T Consensus 94 ~l~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~ 167 (336)
T 3h4j_B 94 ELFDYIVE-----KKRMTEDEGRRFFQQIICAIEYCHRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS 167 (336)
T ss_dssp EHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCC
T ss_pred cHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCchhhEEEcCCCCEEEEEeccceeccCCcccccc
Confidence 99998874 346899999999999999999999999 9999999999999999999999999997665433 334
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHcc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCS 630 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 630 (665)
.||+.|+|||++.+....+.++|||||||++|||++|+.||........ ...+.. .....+...+..+.+++.+||
T Consensus 168 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--~~~i~~--~~~~~p~~~s~~~~~li~~~L 243 (336)
T 3h4j_B 168 CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL--FKKVNS--CVYVMPDFLSPGAQSLIRRMI 243 (336)
T ss_dssp TTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC--BCCCCS--SCCCCCTTSCHHHHHHHHTTS
T ss_pred cCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH--HHHHHc--CCCCCcccCCHHHHHHHHHHc
Confidence 6899999999987443347899999999999999999999976432111 000000 011234456678999999999
Q ss_pred cCCCCCCCCHHHHHHH
Q 005999 631 LKSPEQRPAMWQVLKM 646 (665)
Q Consensus 631 ~~dP~~RPt~~evl~~ 646 (665)
+.||++|||+.|+++.
T Consensus 244 ~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 244 VADPMQRITIQEIRRD 259 (336)
T ss_dssp CSSGGGSCCHHHHTTC
T ss_pred CCChhHCcCHHHHHhC
Confidence 9999999999999863
No 113
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=349.46 Aligned_cols=256 Identities=16% Similarity=0.185 Sum_probs=198.4
Q ss_pred hHhCcccceEEEEEEEC----CeEEEEEEEecCCCchhh---------HHHHHHHHHHHHhCCCCCCeeeeeEEEEe---
Q 005999 395 ELLGRGSIGTTYKAVLD----NHLIVTVKRFDANKTADT---------SAEAFEQHMEAVGGLSHPNLVPIRAYFQA--- 458 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~~~~~~--- 458 (665)
+.||+|+||.||+|... ++..+|+|++........ ..+.+.+|+..++.++||||+++++++..
T Consensus 43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~ 122 (345)
T 2v62_A 43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFK 122 (345)
T ss_dssp EEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESS
T ss_pred eeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccC
Confidence 67999999999999975 678899999876543211 12346678899999999999999999988
Q ss_pred -CCeEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCC--ceEEe
Q 005999 459 -KGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADF--EARLT 535 (665)
Q Consensus 459 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~--~~kl~ 535 (665)
....++||||+ +++|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++ .+||+
T Consensus 123 ~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kL~ 195 (345)
T 2v62_A 123 GRSYRFMVMERL-GIDLQKISGQN-----GTFKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKNPDQVYLA 195 (345)
T ss_dssp SCEEEEEEEECE-EEEHHHHCBGG-----GBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEESSSTTSEEEC
T ss_pred CCcEEEEEEecc-CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCcCHHHEEEccCCCCcEEEE
Confidence 67899999999 99999998742 37999999999999999999999999 99999999999999887 99999
Q ss_pred ecccccccCCCC----------CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHH
Q 005999 536 DYCLSVLSDSSS----------VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWV 605 (665)
Q Consensus 536 Dfgl~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~ 605 (665)
|||++....... ....||+.|+|||++. +..++.++|||||||++|||++|+.||..............
T Consensus 196 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~ 274 (345)
T 2v62_A 196 DYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHK-GVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAK 274 (345)
T ss_dssp CCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHH-TCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHH
T ss_pred eCCCceecccccccccchhccccccCCCccccCHHHhc-CCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHH
Confidence 999997653211 2335899999999987 56789999999999999999999999965322222222222
Q ss_pred HhhccCCCc-------hhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcccC
Q 005999 606 RTMRVDDGR-------EENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAED 658 (665)
Q Consensus 606 ~~~~~~~~~-------~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~ 658 (665)
......... ....+..+.+++.+||+.||++|||+.++++.|+.+.......+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~d 334 (345)
T 2v62_A 275 TNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLD 334 (345)
T ss_dssp HHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCCCCCC
T ss_pred HhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcccCCC
Confidence 222222111 11566789999999999999999999999999988765444433
No 114
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=7.6e-40 Score=345.54 Aligned_cols=239 Identities=19% Similarity=0.290 Sum_probs=184.8
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|... +++.||+|++.... ..+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 134 (349)
T 2w4o_A 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGE 134 (349)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCC
Confidence 57999999999999976 57889999997543 34567899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCC---CCceEEeecccccccCCCC--C
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA---DFEARLTDYCLSVLSDSSS--V 548 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~---~~~~kl~Dfgl~~~~~~~~--~ 548 (665)
|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||+++. ++.+||+|||++....... .
T Consensus 135 L~~~l~~-----~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 208 (349)
T 2w4o_A 135 LFDRIVE-----KGYYSERDAADAVKQILEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208 (349)
T ss_dssp HHHHHTT-----CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred HHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCcccEEEecCCCCCCEEEccCccccccCcccccc
Confidence 9999973 345899999999999999999999999 999999999999975 8899999999997665432 2
Q ss_pred CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC--CchhhhHHHHHHHH
Q 005999 549 EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD--GREENRLGMLTEVA 626 (665)
Q Consensus 549 ~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li 626 (665)
...||+.|+|||++. +..++.++|||||||++|||++|+.||...... ..+...+....... ......+..+.+++
T Consensus 209 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 286 (349)
T 2w4o_A 209 TVCGTPGYCAPEILR-GCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-QFMFRRILNCEYYFISPWWDEVSLNAKDLV 286 (349)
T ss_dssp ----CGGGSCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-HHHHHHHHTTCCCCCTTTTTTSCHHHHHHH
T ss_pred cccCCCCccCHHHhc-CCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-HHHHHHHHhCCCccCCchhhhCCHHHHHHH
Confidence 345899999999987 567899999999999999999999999753211 11222222211111 12345677899999
Q ss_pred HHcccCCCCCCCCHHHHHH
Q 005999 627 SVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 627 ~~cl~~dP~~RPt~~evl~ 645 (665)
.+||+.||++|||+.|+++
T Consensus 287 ~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 287 RKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HTTSCSSGGGSCCHHHHHH
T ss_pred HHHccCChhhCcCHHHHhc
Confidence 9999999999999999986
No 115
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.7e-39 Score=342.72 Aligned_cols=240 Identities=20% Similarity=0.274 Sum_probs=199.1
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCc-hhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKT-ADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
+.||+|+||.||+|... +++.||+|+++.... .....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~g 105 (353)
T 2i0e_A 26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG 105 (353)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCC
Confidence 67999999999999976 478999999975432 123356678899999988 899999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCC---CCC
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDS---SSV 548 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~---~~~ 548 (665)
|+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++++||+|||++..... ...
T Consensus 106 g~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 179 (353)
T 2i0e_A 106 GDLMYHIQQ-----VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK 179 (353)
T ss_dssp CBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccc
Confidence 999999974 245899999999999999999999999 99999999999999999999999999975422 223
Q ss_pred CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHH
Q 005999 549 EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASV 628 (665)
Q Consensus 549 ~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 628 (665)
...||+.|+|||++. +..++.++|||||||++|||++|+.||... ...++...+... ....+...+..+.+++.+
T Consensus 180 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~G~~Pf~~~--~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~ 254 (353)
T 2i0e_A 180 TFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQAPFEGE--DEDELFQSIMEH--NVAYPKSMSKEAVAICKG 254 (353)
T ss_dssp CCCSCGGGCCHHHHT-TCCBSTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHC--CCCCCTTSCHHHHHHHHH
T ss_pred cccCCccccChhhhc-CCCcCCcccccchHHHHHHHHcCCCCCCCC--CHHHHHHHHHhC--CCCCCCCCCHHHHHHHHH
Confidence 446899999999987 567899999999999999999999999752 222333333322 222345667789999999
Q ss_pred cccCCCCCCCC-----HHHHHH
Q 005999 629 CSLKSPEQRPA-----MWQVLK 645 (665)
Q Consensus 629 cl~~dP~~RPt-----~~evl~ 645 (665)
||+.||++||+ +.|+++
T Consensus 255 lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 255 LMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp HTCSCTTSCTTCSTTHHHHHHT
T ss_pred HhhcCHHHcCCCCCCCHHHHhc
Confidence 99999999995 567665
No 116
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=6.1e-40 Score=334.96 Aligned_cols=246 Identities=24% Similarity=0.390 Sum_probs=197.3
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeC-CeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAK-GERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||++... +..||+|+++... ..+.+.+|++++++++||||+++++++.+. +..++||||+++|+
T Consensus 27 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~ 101 (278)
T 1byg_A 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101 (278)
T ss_dssp EEEEECSSCEEEEEEET-TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEE
T ss_pred eEEecCCCceEEEEEEc-CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCC
Confidence 67999999999999875 6789999987543 356788999999999999999999997654 47899999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCCCCCCCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSVEDPDT 553 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~gt 553 (665)
|.+++... ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...........++
T Consensus 102 L~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 177 (278)
T 1byg_A 102 LVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 177 (278)
T ss_dssp HHHHHHHH---HHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------CC
T ss_pred HHHHHHhc---ccccCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCcceEEEeCCCcEEEeeccccccccccccCCCcc
Confidence 99999742 1223789999999999999999999999 9999999999999999999999999997766555555678
Q ss_pred CcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHcccC
Q 005999 554 VAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSLK 632 (665)
Q Consensus 554 ~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 632 (665)
+.|+|||.+. +..++.++||||||+++|||++ |+.||... ...+....+.... ........+..+.+++.+||+.
T Consensus 178 ~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~t~g~~p~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~ 253 (278)
T 1byg_A 178 VKWTAPEALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPRVEKGY-KMDAPDGCPPAVYEVMKNCWHL 253 (278)
T ss_dssp TTTSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS--CGGGHHHHHTTTC-CCCCCTTCCHHHHHHHHHHTCS
T ss_pred ccccCHHHhC-CCCCCchhcHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHhcCC-CCCCcccCCHHHHHHHHHHhcC
Confidence 8999999987 5678999999999999999998 99999763 2233333333221 1223456678899999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhh
Q 005999 633 SPEQRPAMWQVLKMIQEIKES 653 (665)
Q Consensus 633 dP~~RPt~~evl~~L~~~~~~ 653 (665)
||++|||+.|+++.|+++...
T Consensus 254 ~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 254 DAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp SGGGSCCHHHHHHHHHHHHHH
T ss_pred ChhhCCCHHHHHHHHHHHHhh
Confidence 999999999999999998764
No 117
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=3.4e-39 Score=332.14 Aligned_cols=256 Identities=14% Similarity=0.169 Sum_probs=204.1
Q ss_pred HhHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEE-EeCCeEEEEEEecCC
Q 005999 394 AELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF-QAKGERLVIYDYQPN 471 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e~~~~ 471 (665)
.+.||+|+||.||+|.. .+++.||+|++..... .+.+.+|++++++++|++++..++++ ...+..++||||+ +
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 88 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-G 88 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-C
Confidence 36799999999999996 6788999998755432 23477899999999888877766555 6677889999999 9
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEe---CCCCceEEeecccccccCCCC-
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYCLSVLSDSSS- 547 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill---~~~~~~kl~Dfgl~~~~~~~~- 547 (665)
++|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+||++ +.++.+||+|||++.......
T Consensus 89 ~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 89 PSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp CBHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 9999999742 345999999999999999999999999 9999999999999 788999999999997654322
Q ss_pred ---------CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc-cHHHHHHhhccCCC---c
Q 005999 548 ---------VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP-DMLEWVRTMRVDDG---R 614 (665)
Q Consensus 548 ---------~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~-~~~~~~~~~~~~~~---~ 614 (665)
....+|+.|+|||.+. +..++.++|||||||++|||++|+.||........ .....+........ .
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHL-GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 242 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHH
T ss_pred CccCCCCcccccCCCccccchHHhc-CCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhh
Confidence 2335899999999987 56789999999999999999999999986433222 22222222111111 1
Q ss_pred hhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcccCcc
Q 005999 615 EENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDNA 660 (665)
Q Consensus 615 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~ 660 (665)
....+..+.+++.+||+.||++|||+.|+++.|+++.+......+.
T Consensus 243 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~ 288 (296)
T 4hgt_A 243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDY 288 (296)
T ss_dssp TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTC
T ss_pred hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccC
Confidence 2345678999999999999999999999999999999887754433
No 118
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.1e-39 Score=349.61 Aligned_cols=243 Identities=17% Similarity=0.270 Sum_probs=196.1
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCC--CCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS--HPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||++...+++.||||++..........+.+.+|++++++++ ||||+++++++..++..++||| +.++
T Consensus 62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~ 140 (390)
T 2zmd_A 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI 140 (390)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSE
T ss_pred EEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCC
Confidence 679999999999999888999999999776555566788999999999996 5999999999999999999999 5688
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC-----
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS----- 547 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~----- 547 (665)
+|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||++.......
T Consensus 141 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~ 213 (390)
T 2zmd_A 141 DLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVK 213 (390)
T ss_dssp EHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCCGGGEEES-SSCEEECCCSSSCCC---------
T ss_pred CHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccC
Confidence 999999843 46889999999999999999999999 99999999999996 5899999999997664322
Q ss_pred CCCCCCCcccCCccccC----------CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhh
Q 005999 548 VEDPDTVAYKAPEIRKS----------SRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREEN 617 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~----------~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (665)
....||+.|+|||++.. ...++.++|||||||++|||++|+.||.........+.. +.........+..
T Consensus 214 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~-~~~~~~~~~~~~~ 292 (390)
T 2zmd_A 214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA-IIDPNHEIEFPDI 292 (390)
T ss_dssp CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH-HHCTTSCCCCCCC
T ss_pred CCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHH-HhCccccCCCCcc
Confidence 23468999999999863 136889999999999999999999999753211111111 1111111223334
Q ss_pred hHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005999 618 RLGMLTEVASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 618 ~~~~l~~li~~cl~~dP~~RPt~~evl~~ 646 (665)
.+..+.+++.+||+.||++|||+.|+++.
T Consensus 293 ~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 293 PEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred chHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 46679999999999999999999999864
No 119
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.3e-40 Score=348.09 Aligned_cols=255 Identities=15% Similarity=0.185 Sum_probs=207.0
Q ss_pred hHhCcccceEEEEEEECC---------eEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeee--------------
Q 005999 395 ELLGRGSIGTTYKAVLDN---------HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVP-------------- 451 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~-------------- 451 (665)
+.||+|+||.||+|.... ++.||+|++... +.+.+|++++++++||||++
T Consensus 48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~ 120 (352)
T 2jii_A 48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIP 120 (352)
T ss_dssp EEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCC
T ss_pred EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhccCCccCcc
Confidence 679999999999999763 789999998654 24778999999999999887
Q ss_pred -eeEEEEe-CCeEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCC
Q 005999 452 -IRAYFQA-KGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD 529 (665)
Q Consensus 452 -l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~ 529 (665)
+++++.. ++..++||||+ +++|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.+
T Consensus 121 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIl~~~~ 195 (352)
T 2jii_A 121 TCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS---PKHVLSERSVLQVACRLLDALEFLHENE-YVHGNVTAENIFVDPE 195 (352)
T ss_dssp CCCEEEEETTTEEEEEEECC-CEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCGGGEEEETT
T ss_pred chhhccccCCcEEEEEecCC-CcCHHHHHHhC---CcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEEcCC
Confidence 6778776 77899999999 99999999853 2356999999999999999999999999 9999999999999999
Q ss_pred C--ceEEeecccccccCCCC----------CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCC
Q 005999 530 F--EARLTDYCLSVLSDSSS----------VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLA 597 (665)
Q Consensus 530 ~--~~kl~Dfgl~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~ 597 (665)
+ .+||+|||++....... ....||+.|+|||++. +..++.++|||||||++|||++|+.||......
T Consensus 196 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 196 DQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHK-GCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp EEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 8 99999999996654321 2236899999999987 567899999999999999999999999864323
Q ss_pred CccHHHHHHhhccCCC-c------hhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcccCcccC
Q 005999 598 PPDMLEWVRTMRVDDG-R------EENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDNAAF 662 (665)
Q Consensus 598 ~~~~~~~~~~~~~~~~-~------~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~~~ 662 (665)
...+............ . ....+..+.+++.+||+.||++|||+.|+++.|+++.+......+..+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~~~~~ 346 (352)
T 2jii_A 275 TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSPYDPI 346 (352)
T ss_dssp HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCTTSCC
T ss_pred HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCCcCccc
Confidence 3334333332222211 1 124467899999999999999999999999999999988876544443
No 120
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.3e-39 Score=331.83 Aligned_cols=240 Identities=19% Similarity=0.311 Sum_probs=179.6
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++||||+ ++
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 97 (275)
T 2eue_A 19 KTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GN 97 (275)
T ss_dssp C---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-CE
T ss_pred EEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-CC
Confidence 5799999999999985 57889999999765432 233567889999999999999999999999999999999999 67
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC--CCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS--VED 550 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~--~~~ 550 (665)
+|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++....... ...
T Consensus 98 ~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 171 (275)
T 2eue_A 98 ELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS 171 (275)
T ss_dssp EHHHHHHT-----SSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCSSCC------------
T ss_pred cHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CeeccCChHhEEECCCCCEEEeecccceeccCcccccCC
Confidence 89888873 346899999999999999999999999 9999999999999999999999999997654432 233
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHcc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCS 630 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 630 (665)
.+|+.|+|||.+.+....+.++||||||+++|||++|+.||... ........+.... ...+...+..+.+++.+||
T Consensus 172 ~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l 247 (275)
T 2eue_A 172 CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE--SIPVLFKNISNGV--YTLPKFLSPGAAGLIKRML 247 (275)
T ss_dssp ---CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTC--CCCCTTSCHHHHHHHHHHS
T ss_pred CCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCC--CCCCccCCHHHHHHHHHHh
Confidence 58999999999874444578999999999999999999999752 1122222222222 2234456778999999999
Q ss_pred cCCCCCCCCHHHHHH
Q 005999 631 LKSPEQRPAMWQVLK 645 (665)
Q Consensus 631 ~~dP~~RPt~~evl~ 645 (665)
+.||++|||+.|+++
T Consensus 248 ~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 248 IVNPLNRISIHEIMQ 262 (275)
T ss_dssp CSSGGGSCCHHHHTT
T ss_pred hcCHhHCCCHHHHhh
Confidence 999999999999976
No 121
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-39 Score=355.44 Aligned_cols=241 Identities=20% Similarity=0.333 Sum_probs=202.1
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|... +|+.||||++...... ....+.+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg 101 (476)
T 2y94_A 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGG 101 (476)
T ss_dssp EEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSE
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 57999999999999975 7899999999654321 123567899999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC--CCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS--VED 550 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~--~~~ 550 (665)
+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++....... ...
T Consensus 102 ~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~ 175 (476)
T 2y94_A 102 ELFDYICK-----NGRLDEKESRRLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS 175 (476)
T ss_dssp EHHHHTTS-----SSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCC
T ss_pred cHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcccccHHHEEEecCCCeEEEeccchhhcccccccccc
Confidence 99999873 356999999999999999999999999 9999999999999999999999999997765432 344
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHcc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCS 630 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 630 (665)
.||+.|+|||++.+....+.++||||+||++|||++|+.||... ....+...+..... ..+...+..+.+++.+||
T Consensus 176 ~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~--~~~~~~~~i~~~~~--~~p~~~s~~~~~Li~~~L 251 (476)
T 2y94_A 176 CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD--HVPTLFKKICDGIF--YTPQYLNPSVISLLKHML 251 (476)
T ss_dssp CSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS--SSHHHHHHHHTTCC--CCCTTCCHHHHHHHHHHT
T ss_pred CCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC--CHHHHHHHHhcCCc--CCCccCCHHHHHHHHHHc
Confidence 68999999999874444578999999999999999999999763 22233333332221 223445677999999999
Q ss_pred cCCCCCCCCHHHHHH
Q 005999 631 LKSPEQRPAMWQVLK 645 (665)
Q Consensus 631 ~~dP~~RPt~~evl~ 645 (665)
+.||++|||+.|+++
T Consensus 252 ~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 252 QVDPMKRATIKDIRE 266 (476)
T ss_dssp CSSTTTSCCHHHHHT
T ss_pred CCCchhCcCHHHHHh
Confidence 999999999999987
No 122
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.7e-39 Score=339.79 Aligned_cols=240 Identities=18% Similarity=0.256 Sum_probs=190.8
Q ss_pred hHhCcccceEEEEEEE----CCeEEEEEEEecCCCch--hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVL----DNHLIVTVKRFDANKTA--DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 468 (665)
+.||+|+||.||++.. .+++.||+|+++..... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 102 (327)
T 3a62_A 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEY 102 (327)
T ss_dssp EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeC
Confidence 6799999999999997 47889999999765321 23345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC--
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS-- 546 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~-- 546 (665)
+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 103 ~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 176 (327)
T 3a62_A 103 LSGGELFMQLER-----EGIFMEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT 176 (327)
T ss_dssp CTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTSCEEECCCSCC--------
T ss_pred CCCCcHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHhCC-EEcccCCHHHeEECCCCcEEEEeCCcccccccCCc
Confidence 999999999974 345889999999999999999999999 999999999999999999999999998654322
Q ss_pred -CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHH
Q 005999 547 -SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEV 625 (665)
Q Consensus 547 -~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 625 (665)
.....||+.|+|||++. +..++.++|||||||++|||++|+.||.... .......+... ....+...+..+.++
T Consensus 177 ~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~--~~~~p~~~~~~~~~l 251 (327)
T 3a62_A 177 VTHTFCGTIEYMAPEILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGEN--RKKTIDKILKC--KLNLPPYLTQEARDL 251 (327)
T ss_dssp --CTTSSCCTTSCHHHHT-TSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHT--CCCCCTTSCHHHHHH
T ss_pred cccccCCCcCccCHhhCc-CCCCCCcccchhHHHHHHHHHHCCCCCCCCC--HHHHHHHHHhC--CCCCCCCCCHHHHHH
Confidence 22346899999999987 5678999999999999999999999997531 12222222222 222344567789999
Q ss_pred HHHcccCCCCCCC-----CHHHHHH
Q 005999 626 ASVCSLKSPEQRP-----AMWQVLK 645 (665)
Q Consensus 626 i~~cl~~dP~~RP-----t~~evl~ 645 (665)
+.+||+.||++|| ++.|+++
T Consensus 252 i~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 252 LKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHHHHhcCHhhccCCCCCCHHHHHc
Confidence 9999999999999 7788876
No 123
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.4e-39 Score=331.01 Aligned_cols=249 Identities=20% Similarity=0.333 Sum_probs=203.9
Q ss_pred hHhCcccceEEEEEEEC----CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecC
Q 005999 395 ELLGRGSIGTTYKAVLD----NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQP 470 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 470 (665)
+.||+|+||.||+|... .+..||+|.+..... ....+.+.+|+.++++++||||+++++++.++ ..++||||++
T Consensus 18 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e~~~ 95 (281)
T 3cc6_A 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT-LDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIMELYP 95 (281)
T ss_dssp EEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC-HHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEEECCT
T ss_pred EEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC-chHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEEecCC
Confidence 67999999999999853 345799999876543 34567789999999999999999999998754 5689999999
Q ss_pred CCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC---
Q 005999 471 NGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS--- 547 (665)
Q Consensus 471 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~--- 547 (665)
+++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 96 ~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 170 (281)
T 3cc6_A 96 YGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYK 170 (281)
T ss_dssp TCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEEETTEEEECCCCGGGCC-------
T ss_pred CCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEECCCCcEEeCccCCCcccccccccc
Confidence 99999999742 345899999999999999999999999 9999999999999999999999999997665432
Q ss_pred -CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHH
Q 005999 548 -VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEV 625 (665)
Q Consensus 548 -~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 625 (665)
....+++.|+|||++. +..++.++||||||+++|||++ |+.||... ...+....+..... ...+...+..+.++
T Consensus 171 ~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~llt~g~~p~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~l~~l 246 (281)
T 3cc6_A 171 ASVTRLPIKWMSPESIN-FRRFTTASDVWMFAVCMWEILSFGKQPFFWL--ENKDVIGVLEKGDR-LPKPDLCPPVLYTL 246 (281)
T ss_dssp --CCCCCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--CGGGHHHHHHHTCC-CCCCTTCCHHHHHH
T ss_pred cccCCCCcceeCchhhc-cCCCCchhccHHHHHHHHHHHhCCCCCcccC--ChHHHHHHHhcCCC-CCCCCCCCHHHHHH
Confidence 2234678899999987 5678999999999999999998 99999753 22344443333221 22344567789999
Q ss_pred HHHcccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 626 ASVCSLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 626 i~~cl~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
+.+||+.||++|||+.|+++.|+++.+..
T Consensus 247 i~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 247 MTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999987643
No 124
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=5.7e-39 Score=330.61 Aligned_cols=254 Identities=14% Similarity=0.172 Sum_probs=204.9
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEE-EeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYF-QAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|.. .+++.||+|++..... .+.+.+|+.++++++|++++..+.++ ...+..++||||+ ++
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~ 89 (296)
T 3uzp_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GP 89 (296)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred EEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CC
Confidence 5799999999999996 6789999999865543 23578899999999988866665554 6677889999999 89
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEe---CCCCceEEeecccccccCCCC--
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill---~~~~~~kl~Dfgl~~~~~~~~-- 547 (665)
+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+||++ +.++.+||+|||++.......
T Consensus 90 ~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (296)
T 3uzp_A 90 SLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp BHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred CHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence 999999742 346999999999999999999999999 9999999999999 488999999999997654332
Q ss_pred --------CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCC-ccHHHHHHhhccCCC---ch
Q 005999 548 --------VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP-PDMLEWVRTMRVDDG---RE 615 (665)
Q Consensus 548 --------~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~-~~~~~~~~~~~~~~~---~~ 615 (665)
....||+.|+|||++. +..++.++|||||||++|||++|+.||....... ......+........ ..
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (296)
T 3uzp_A 165 QHIPYRENKNLTGTARYASINTHL-GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 243 (296)
T ss_dssp CBCCCCCSCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHT
T ss_pred cccccccccccccccccCChhhhc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHH
Confidence 2335899999999987 5678999999999999999999999998643322 233222222111111 12
Q ss_pred hhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcccCc
Q 005999 616 ENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAEDN 659 (665)
Q Consensus 616 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~ 659 (665)
...+..+.+++.+||+.||++|||+.|+++.|+++........+
T Consensus 244 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~ 287 (296)
T 3uzp_A 244 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYD 287 (296)
T ss_dssp TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSS
T ss_pred hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCccc
Confidence 34567899999999999999999999999999999888765433
No 125
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.1e-39 Score=342.56 Aligned_cols=240 Identities=20% Similarity=0.263 Sum_probs=197.4
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCC-----CCCeeeeeEEEEeCCeEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS-----HPNLVPIRAYFQAKGERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~e~ 468 (665)
+.||+|+||.||+|.. .+++.||||++.... ...+.+..|+++++.++ ||||+++++++...+..++||||
T Consensus 41 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~ 117 (360)
T 3llt_A 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK---KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEP 117 (360)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCH---HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECC
T ss_pred EEEcccCCeEEEEEEECCCCeEEEEEEeccch---hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcC
Confidence 6799999999999997 478899999997432 44566778999998886 99999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCC--------------------
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA-------------------- 528 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~-------------------- 528 (665)
+ +++|.+++... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 118 ~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~ 192 (360)
T 3llt_A 118 L-GPSLYEIITRN---NYNGFHIEDIKLYCIEILKALNYLRKMS-LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ 192 (360)
T ss_dssp C-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEE
T ss_pred C-CCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCcccEEEccccccccccchhccccccccc
Confidence 9 89999999853 2345899999999999999999999999 999999999999975
Q ss_pred -----CCceEEeecccccccCCCCCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHH
Q 005999 529 -----DFEARLTDYCLSVLSDSSSVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLE 603 (665)
Q Consensus 529 -----~~~~kl~Dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~ 603 (665)
++.+||+|||++...........||+.|+|||++. +..++.++|||||||++|||++|+.||.... ..+...
T Consensus 193 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~ 269 (360)
T 3llt_A 193 IYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVIL-NLGWDVSSDMWSFGCVLAELYTGSLLFRTHE--HMEHLA 269 (360)
T ss_dssp EEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHT-TCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHH
T ss_pred ccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHc-CCCCCCccchHHHHHHHHHHHHCCCCCCCCc--HHHHHH
Confidence 78999999999987766666667999999999987 5679999999999999999999999997532 122222
Q ss_pred HHHhhccCCC--------------------------------------------chhhhHHHHHHHHHHcccCCCCCCCC
Q 005999 604 WVRTMRVDDG--------------------------------------------REENRLGMLTEVASVCSLKSPEQRPA 639 (665)
Q Consensus 604 ~~~~~~~~~~--------------------------------------------~~~~~~~~l~~li~~cl~~dP~~RPt 639 (665)
.+........ ........+.+|+.+||+.||++|||
T Consensus 270 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 349 (360)
T 3llt_A 270 MMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPS 349 (360)
T ss_dssp HHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCC
T ss_pred HHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCC
Confidence 2222111110 00011256889999999999999999
Q ss_pred HHHHHH
Q 005999 640 MWQVLK 645 (665)
Q Consensus 640 ~~evl~ 645 (665)
+.|+++
T Consensus 350 a~elL~ 355 (360)
T 3llt_A 350 PAELLK 355 (360)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 999975
No 126
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.8e-39 Score=337.31 Aligned_cols=243 Identities=19% Similarity=0.294 Sum_probs=202.1
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchh----hHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEe
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTAD----TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDY 468 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 468 (665)
.+.||+|+||.||+|... ++..||+|.+....... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 96 (321)
T 2a2a_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILEL 96 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEc
Confidence 467999999999999965 68899999987654321 2367789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCC----ceEEeecccccccC
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADF----EARLTDYCLSVLSD 544 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~----~~kl~Dfgl~~~~~ 544 (665)
+++++|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||++....
T Consensus 97 ~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~ 170 (321)
T 2a2a_A 97 VSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (321)
T ss_dssp CCSCBHHHHHHT-----CSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred CCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChHHEEEecCCCCcCCEEEccCccceecC
Confidence 999999999973 346899999999999999999999999 99999999999999887 79999999997665
Q ss_pred CCC--CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC--chhhhHH
Q 005999 545 SSS--VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG--REENRLG 620 (665)
Q Consensus 545 ~~~--~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 620 (665)
... ....||+.|+|||++. +..++.++||||||+++|||++|+.||... ...+....+........ .....+.
T Consensus 171 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~ 247 (321)
T 2a2a_A 171 DGVEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANITSVSYDFDEEFFSHTSE 247 (321)
T ss_dssp TTCCCCCCCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHTTCCCCCHHHHTTCCH
T ss_pred ccccccccCCCCCccCccccc-CCCCCCccccHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhcccccChhhhcccCH
Confidence 432 3345899999999987 567899999999999999999999999752 12223322222222111 1234567
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 621 MLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 621 ~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 248 LAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhc
Confidence 8999999999999999999999987
No 127
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.1e-39 Score=333.13 Aligned_cols=243 Identities=21% Similarity=0.344 Sum_probs=199.8
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEe----CCeEEEEEEec
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA----KGERLVIYDYQ 469 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~ 469 (665)
+.||+|+||.||+|... ++..||+|.+..........+.+.+|+.++++++||||+++++++.. ....++||||+
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 111 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECC
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEec
Confidence 46999999999999864 67889999998766555667889999999999999999999999875 35689999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CeeccCCCCCceEeC-CCCceEEeecccccccCCCC
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS-WLIHGNLKSSNVLLG-ADFEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~-~iiH~Dlk~~Nill~-~~~~~kl~Dfgl~~~~~~~~ 547 (665)
++|+|.+++.. ...+++..++.++.||+.||+|||+.+ +|+||||||+||+++ .++.+||+|||++.......
T Consensus 112 ~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 186 (290)
T 1t4h_A 112 TSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 186 (290)
T ss_dssp CSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred CCCCHHHHHHH-----ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccc
Confidence 99999999974 246899999999999999999999975 599999999999998 78999999999997655432
Q ss_pred -CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHH
Q 005999 548 -VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVA 626 (665)
Q Consensus 548 -~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 626 (665)
....+|+.|+|||++. ..++.++||||||+++|||++|+.||.... ........+.............+..+.+++
T Consensus 187 ~~~~~~t~~y~aPE~~~--~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 263 (290)
T 1t4h_A 187 AKAVIGTPEFMAPEMYE--EKYDESVDVYAFGMCMLEMATSEYPYSECQ-NAAQIYRRVTSGVKPASFDKVAIPEVKEII 263 (290)
T ss_dssp BEESCSSCCCCCGGGGG--TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS-SHHHHHHHHTTTCCCGGGGGCCCHHHHHHH
T ss_pred cccccCCcCcCCHHHHh--ccCCCcchHHHHHHHHHHHHhCCCCCCCcC-cHHHHHHHHhccCCccccCCCCCHHHHHHH
Confidence 2345899999999886 458999999999999999999999997532 111222222222222223444556799999
Q ss_pred HHcccCCCCCCCCHHHHHH
Q 005999 627 SVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 627 ~~cl~~dP~~RPt~~evl~ 645 (665)
.+||+.||++|||+.|+++
T Consensus 264 ~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 264 EGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHSCSSGGGSCCHHHHHT
T ss_pred HHHccCChhhCCCHHHHhh
Confidence 9999999999999999986
No 128
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.9e-39 Score=329.26 Aligned_cols=244 Identities=20% Similarity=0.287 Sum_probs=202.3
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
.+.||+|+||.||+|... +++.||+|++..... ....+.+.+|+.++++++||||+++++++.+++..++||||++++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCC
Confidence 357999999999999975 688999999865443 234577899999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC-----C
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS-----S 547 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~-----~ 547 (665)
+|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||.+...... .
T Consensus 91 ~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 164 (276)
T 2yex_A 91 ELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (276)
T ss_dssp EGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred cHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcc
Confidence 99998863 346899999999999999999999999 999999999999999999999999998654321 2
Q ss_pred CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHH
Q 005999 548 VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVAS 627 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 627 (665)
....+|+.|+|||.+.....++.++||||||+++|||++|+.||............+.... .........+..+.+++.
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~ 243 (276)
T 2yex_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK-TYLNPWKKIDSAPLALLH 243 (276)
T ss_dssp CCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTC-TTSTTGGGSCHHHHHHHH
T ss_pred cCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcc-cccCchhhcCHHHHHHHH
Confidence 3345899999999987444457899999999999999999999987543333333333221 111223456778999999
Q ss_pred HcccCCCCCCCCHHHHHH
Q 005999 628 VCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 628 ~cl~~dP~~RPt~~evl~ 645 (665)
+||+.||++|||+.|+++
T Consensus 244 ~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 244 KILVENPSARITIPDIKK 261 (276)
T ss_dssp HHSCSSTTTSCCHHHHTT
T ss_pred HHCCCCchhCCCHHHHhc
Confidence 999999999999999976
No 129
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=341.10 Aligned_cols=248 Identities=18% Similarity=0.299 Sum_probs=199.6
Q ss_pred hHhCcccceEEEEEEEC-CeE----EEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEec
Q 005999 395 ELLGRGSIGTTYKAVLD-NHL----IVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQ 469 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 469 (665)
+.||+|+||.||+|... +++ .|++|.+..... ....+.+.+|+.++++++||||+++++++.... .++|+||+
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~ 98 (327)
T 3lzb_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLM 98 (327)
T ss_dssp EEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSS-CCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCC
T ss_pred EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccC-HHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEec
Confidence 67999999999999854 343 357777754432 345677899999999999999999999998765 78999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC--
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-- 547 (665)
.+|+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 99 ~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~ 173 (327)
T 3lzb_A 99 PFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173 (327)
T ss_dssp SSCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTC----------
T ss_pred CCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHhhCC-CcCCCCCHHHEEEcCCCCEEEccCcceeEccCcccc
Confidence 999999999753 346899999999999999999999999 9999999999999999999999999997654322
Q ss_pred ---CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHH
Q 005999 548 ---VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLT 623 (665)
Q Consensus 548 ---~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 623 (665)
....+|+.|+|||.+. +..++.++|||||||++|||++ |+.||... ...++...+.... ....+...+..+.
T Consensus 174 ~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~~g~~p~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~l~ 249 (327)
T 3lzb_A 174 YHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGE-RLPQPPICTIDVY 249 (327)
T ss_dssp ------CCCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CGGGHHHHHHTTC-CCCCCTTBCHHHH
T ss_pred ccccCCCccccccCHHHHc-CCCCChHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHcCC-CCCCCccCCHHHH
Confidence 1224677899999987 6778999999999999999999 99999763 2334444443322 2223445677899
Q ss_pred HHHHHcccCCCCCCCCHHHHHHHHHHHHhh
Q 005999 624 EVASVCSLKSPEQRPAMWQVLKMIQEIKES 653 (665)
Q Consensus 624 ~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 653 (665)
+++.+||+.||++|||+.|+++.|+.+...
T Consensus 250 ~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 250 MIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 999999999999999999999999999754
No 130
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4.6e-40 Score=345.89 Aligned_cols=239 Identities=21% Similarity=0.328 Sum_probs=198.1
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCc-hhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKT-ADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
+.||+|+||.||+|... +++.||+|+++.... .....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 23 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~g 102 (345)
T 1xjd_A 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG 102 (345)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCC
Confidence 67999999999999975 688999999975422 122345677888888876 999999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCC---CCC
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDS---SSV 548 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~---~~~ 548 (665)
|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+|||++..... ...
T Consensus 103 g~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~ 176 (345)
T 1xjd_A 103 GDLMYHIQS-----CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 176 (345)
T ss_dssp CBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCccc
Confidence 999999974 245899999999999999999999999 99999999999999999999999999975432 223
Q ss_pred CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHH
Q 005999 549 EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASV 628 (665)
Q Consensus 549 ~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 628 (665)
...||+.|+|||++. +..++.++|||||||++|||++|+.||... ...++...+.... ...+...+..+.+++.+
T Consensus 177 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~ 251 (345)
T 1xjd_A 177 TFCGTPDYIAPEILL-GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ--DEEELFHSIRMDN--PFYPRWLEKEAKDLLVK 251 (345)
T ss_dssp CCCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCC--CCCCTTSCHHHHHHHHH
T ss_pred CCCCCcccCChhhhc-CCCCCChhhhHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHhCC--CCCCcccCHHHHHHHHH
Confidence 446899999999987 567899999999999999999999999752 2223333333221 22344567789999999
Q ss_pred cccCCCCCCCCHH-HHH
Q 005999 629 CSLKSPEQRPAMW-QVL 644 (665)
Q Consensus 629 cl~~dP~~RPt~~-evl 644 (665)
||+.||++||++. |++
T Consensus 252 lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 252 LFVREPEKRLGVRGDIR 268 (345)
T ss_dssp HSCSSGGGSBTTBSCGG
T ss_pred HhcCCHhHcCCChHHHH
Confidence 9999999999997 664
No 131
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.2e-40 Score=342.86 Aligned_cols=250 Identities=22% Similarity=0.316 Sum_probs=193.9
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCC----eEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKG----ERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv~e~ 468 (665)
+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|++++++++||||+++++++.... ..++||||
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~ 97 (311)
T 3ork_A 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97 (311)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred EEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEec
Confidence 6799999999999996 57899999999765432 234567899999999999999999999987654 34999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC-
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS- 547 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~- 547 (665)
+++|+|.++++. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~g~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 171 (311)
T 3ork_A 98 VDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171 (311)
T ss_dssp CCEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEETTSCEEECCCSCC--------
T ss_pred CCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEcCCCCEEEeeccCccccccccc
Confidence 999999999974 346899999999999999999999999 9999999999999999999999999997654322
Q ss_pred -----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC--CchhhhHH
Q 005999 548 -----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD--GREENRLG 620 (665)
Q Consensus 548 -----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 620 (665)
....||+.|+|||++. +..++.++|||||||++|||++|+.||.... ............... ......+.
T Consensus 172 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (311)
T 3ork_A 172 SVTQTAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTGDS--PVSVAYQHVREDPIPPSARHEGLSA 248 (311)
T ss_dssp ----------CCTTCCHHHHH-TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHCCCCCHHHHSTTCCH
T ss_pred ccccccccCcCcccCCHHHhc-CCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHhcCCCCCcccccCCCCH
Confidence 1234799999999987 5678999999999999999999999997531 111111111111111 11234567
Q ss_pred HHHHHHHHcccCCCCCCCCHHHH-HHHHHHHHhh
Q 005999 621 MLTEVASVCSLKSPEQRPAMWQV-LKMIQEIKES 653 (665)
Q Consensus 621 ~l~~li~~cl~~dP~~RPt~~ev-l~~L~~~~~~ 653 (665)
.+.+++.+||+.||++||++.++ ...+..+...
T Consensus 249 ~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 249 DLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence 89999999999999999966554 4566655443
No 132
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.1e-39 Score=337.38 Aligned_cols=243 Identities=18% Similarity=0.270 Sum_probs=193.7
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++.++ +||||+++++++.+++..++||||+++|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 96 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPG--HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGG 96 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS--CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc--hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCC
Confidence 4699999999999984 4788999999976532 3456788999999885 8999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCc---eEEeecccccccCCC---
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFE---ARLTDYCLSVLSDSS--- 546 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~---~kl~Dfgl~~~~~~~--- 546 (665)
+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||++......
T Consensus 97 ~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 97 SILSHIHK-----RRHFNELEASVVVQDVASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp BHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred cHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 99999974 246899999999999999999999999 999999999999998766 999999998654321
Q ss_pred -------CCCCCCCCcccCCccccC----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCC-------------ccHH
Q 005999 547 -------SVEDPDTVAYKAPEIRKS----SRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP-------------PDML 602 (665)
Q Consensus 547 -------~~~~~gt~~y~aPE~~~~----~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~-------------~~~~ 602 (665)
.....||+.|+|||++.. ...++.++|||||||++|||++|+.||....... ..+.
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence 112348999999998862 1357889999999999999999999997643221 1122
Q ss_pred HHHHhhccCCC--chhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 603 EWVRTMRVDDG--REENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 603 ~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
..+........ .....+..+.+++.+||+.||++|||+.|+++
T Consensus 251 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 251 ESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 22222221111 11345678999999999999999999999987
No 133
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.9e-39 Score=329.65 Aligned_cols=240 Identities=23% Similarity=0.336 Sum_probs=199.6
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
.+.||+|+||.||+|... ++..+|+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 91 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGG 91 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCC
Confidence 367999999999999965 477899999876543 33567899999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEe---CCCCceEEeecccccccCCCC--
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill---~~~~~~kl~Dfgl~~~~~~~~-- 547 (665)
+|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++.......
T Consensus 92 ~L~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~ 165 (277)
T 3f3z_A 92 ELFERVVH-----KRVFRESDAARIMKDVLSAVAYCHKLN-VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM 165 (277)
T ss_dssp BHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB
T ss_pred cHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch
Confidence 99999874 345899999999999999999999999 9999999999999 788999999999997655432
Q ss_pred CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCc--hhhhHHHHHHH
Q 005999 548 VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGR--EENRLGMLTEV 625 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l 625 (665)
....+|+.|+|||++. +.++.++||||||+++|||++|+.||... ...+....+......... ....+..+.++
T Consensus 166 ~~~~~t~~y~aPE~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (277)
T 3f3z_A 166 RTKVGTPYYVSPQVLE--GLYGPECDEWSAGVMMYVLLCGYPPFSAP--TDSEVMLKIREGTFTFPEKDWLNVSPQAESL 241 (277)
T ss_dssp CCCCSCTTTCCHHHHT--TCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCHHHHTTSCHHHHHH
T ss_pred hccCCCCCccChHHhc--ccCCchhhehhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCCchhhhcCCHHHHHH
Confidence 3446899999999986 34899999999999999999999999763 222333333322222111 12457789999
Q ss_pred HHHcccCCCCCCCCHHHHHH
Q 005999 626 ASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 626 i~~cl~~dP~~RPt~~evl~ 645 (665)
+.+||+.||++|||+.|+++
T Consensus 242 i~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 242 IRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHccCChhhCcCHHHHhc
Confidence 99999999999999999986
No 134
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=4.6e-39 Score=329.13 Aligned_cols=255 Identities=20% Similarity=0.321 Sum_probs=205.0
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchh----hHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEe
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTAD----TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDY 468 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 468 (665)
.+.||+|+||.||+|... +++.||+|.++...... ...+.+.+|+.++++++||||+++++++.+....++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 89 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL 89 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEee
Confidence 367999999999999976 68899999987553321 2367889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCC----ceEEeecccccccC
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADF----EARLTDYCLSVLSD 544 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~----~~kl~Dfgl~~~~~ 544 (665)
+++++|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++ .+||+|||++....
T Consensus 90 ~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~ 163 (283)
T 3bhy_A 90 VSGGELFDFLAE-----KESLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 163 (283)
T ss_dssp CCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred cCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChHHEEEecCCCCCCceEEEecccceecc
Confidence 999999999974 346899999999999999999999999 99999999999999877 89999999997664
Q ss_pred CCC--CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC--chhhhHH
Q 005999 545 SSS--VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG--REENRLG 620 (665)
Q Consensus 545 ~~~--~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 620 (665)
... ....+|+.|+|||++. +..++.++||||||+++|||++|+.||.... ..+....+........ .....+.
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (283)
T 3bhy_A 164 AGNEFKNIFGTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGET--KQETLTNISAVNYDFDEEYFSNTSE 240 (283)
T ss_dssp --------CCCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHTTCCCCCHHHHTTCCH
T ss_pred CCCcccccCCCcCccCcceec-CCCCCcchhhhhHHHHHHHHHHCCCCCCCcc--hHHHHHHhHhcccCCcchhcccCCH
Confidence 432 2335899999999987 5678999999999999999999999997531 1222222222221111 1234567
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHH--HHHHHHhhhccc
Q 005999 621 MLTEVASVCSLKSPEQRPAMWQVLK--MIQEIKESVMAE 657 (665)
Q Consensus 621 ~l~~li~~cl~~dP~~RPt~~evl~--~L~~~~~~~~~~ 657 (665)
.+.+++.+||+.||++|||+.|+++ .++.+.......
T Consensus 241 ~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~~~~ 279 (283)
T 3bhy_A 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRG 279 (283)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCCC--
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHhhhc
Confidence 7999999999999999999999998 566665554433
No 135
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.3e-40 Score=343.26 Aligned_cols=237 Identities=19% Similarity=0.279 Sum_probs=197.4
Q ss_pred HhHhCcccceEEEEEEE-CCeEEEEEEEecCCCchh------hHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEE
Q 005999 394 AELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTAD------TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIY 466 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 466 (665)
.+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~ 108 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVM 108 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEE
Confidence 35799999999999985 578899999997654211 13345778999999999999999999999999999999
Q ss_pred EecCCC-CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCC
Q 005999 467 DYQPNG-SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDS 545 (665)
Q Consensus 467 e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 545 (665)
||+.+| +|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 109 e~~~~g~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 182 (335)
T 3dls_A 109 EKHGSGLDLFAFIDR-----HPRLDEPLASYIFRQLVSAVGYLRLKD-IIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182 (335)
T ss_dssp ECCTTSCBHHHHHHT-----CCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEEeccCHHHEEEcCCCcEEEeecccceECCC
Confidence 999777 99999974 346999999999999999999999999 99999999999999999999999999977654
Q ss_pred CC--CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHH
Q 005999 546 SS--VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLT 623 (665)
Q Consensus 546 ~~--~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 623 (665)
.. ....||+.|+|||++.....++.++|||||||++|||++|+.||..... ........+...+..+.
T Consensus 183 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----------~~~~~~~~~~~~~~~l~ 252 (335)
T 3dls_A 183 GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----------TVEAAIHPPYLVSKELM 252 (335)
T ss_dssp TCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG----------GTTTCCCCSSCCCHHHH
T ss_pred CCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH----------HHhhccCCCcccCHHHH
Confidence 33 2335899999999987444448899999999999999999999965210 01111122334567799
Q ss_pred HHHHHcccCCCCCCCCHHHHHHH
Q 005999 624 EVASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 624 ~li~~cl~~dP~~RPt~~evl~~ 646 (665)
+++.+||+.||++|||+.|+++.
T Consensus 253 ~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 253 SLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHC
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 99999999999999999999884
No 136
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.8e-39 Score=338.18 Aligned_cols=256 Identities=25% Similarity=0.410 Sum_probs=204.4
Q ss_pred hHhCcccceEEEEEEEC-CeEE--EEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEecC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLI--VTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDYQP 470 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 470 (665)
+.||+|+||.||+|... ++.. +++|++..... ....+.+.+|+++++++ +||||+++++++.+.+..++||||++
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 109 (327)
T 1fvr_A 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 109 (327)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred eeeecCCCceEEEEEEccCCcccceeeeeeccccc-hHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCC
Confidence 67999999999999853 5554 48998875432 23456788999999999 99999999999999999999999999
Q ss_pred CCCHHHHHhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeeccc
Q 005999 471 NGSLFNLIHGSRS-----------IRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCL 539 (665)
Q Consensus 471 ~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl 539 (665)
+|+|.+++...+. .....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 110 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kL~Dfg~ 188 (327)
T 1fvr_A 110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGL 188 (327)
T ss_dssp TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTC
T ss_pred CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCccceEEEcCCCeEEEcccCc
Confidence 9999999975420 12346899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC--CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchh
Q 005999 540 SVLSDSS--SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREE 616 (665)
Q Consensus 540 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (665)
+...... .....+++.|+|||++. +..++.++||||||+++|||++ |+.||.... ..++...+.... ....+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~pf~~~~--~~~~~~~~~~~~-~~~~~~ 264 (327)
T 1fvr_A 189 SRGQEVYVKKTMGRLPVRWMAIESLN-YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--CAELYEKLPQGY-RLEKPL 264 (327)
T ss_dssp EESSCEECCC----CCTTTCCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHGGGTC-CCCCCT
T ss_pred CccccccccccCCCCCccccChhhhc-cccCCchhcchHHHHHHHHHHcCCCCCCCCCc--HHHHHHHhhcCC-CCCCCC
Confidence 8644322 22234688999999987 5678999999999999999998 999997531 122222222211 112344
Q ss_pred hhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcc
Q 005999 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMA 656 (665)
Q Consensus 617 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 656 (665)
..+..+.+++.+||+.||++|||+.|+++.|+.+.+....
T Consensus 265 ~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 304 (327)
T 1fvr_A 265 NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304 (327)
T ss_dssp TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcC
Confidence 5677899999999999999999999999999999887654
No 137
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.1e-39 Score=337.12 Aligned_cols=257 Identities=21% Similarity=0.293 Sum_probs=208.0
Q ss_pred HhHhCcccceEEEEEEE------CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCC-eEEEE
Q 005999 394 AELLGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKG-ERLVI 465 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-~~~lv 465 (665)
.+.||+|+||.||+|.. .+++.||+|++..... ....+.+.+|+.++.++ +||||+++++++...+ ..++|
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv 110 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC-cHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEE
Confidence 36799999999999984 3678999999976543 33456789999999999 7999999999988754 58999
Q ss_pred EEecCCCCHHHHHhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEE
Q 005999 466 YDYQPNGSLFNLIHGSRSI-----------RAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARL 534 (665)
Q Consensus 466 ~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl 534 (665)
|||+++|+|.+++...... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl 189 (316)
T 2xir_A 111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKI 189 (316)
T ss_dssp EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEE
T ss_pred EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEE
Confidence 9999999999999854321 0223889999999999999999999999 999999999999999999999
Q ss_pred eecccccccCCCCC-----CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhh
Q 005999 535 TDYCLSVLSDSSSV-----EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTM 608 (665)
Q Consensus 535 ~Dfgl~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~ 608 (665)
+|||++........ ...+|+.|+|||++. +..++.++||||||+++|||++ |+.||..... ...+...+...
T Consensus 190 ~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-~~~~~~~~~~~ 267 (316)
T 2xir_A 190 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCRRLKEG 267 (316)
T ss_dssp CCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC-SHHHHHHHHHT
T ss_pred CCCccccccccCccceeccCCCcceeecCchhhc-cccccchhHHHHHHHHHHHHHhCCCCCCcccch-hHHHHHHhccC
Confidence 99999976543321 223678899999987 5678999999999999999998 9999976432 22333333322
Q ss_pred ccCCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhc
Q 005999 609 RVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVM 655 (665)
Q Consensus 609 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 655 (665)
.. ...+...+..+.+++.+||+.||++|||+.|+++.|+.+.+...
T Consensus 268 ~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 268 TR-MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp CC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred cc-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 21 22334566789999999999999999999999999999987643
No 138
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=4.9e-40 Score=344.80 Aligned_cols=258 Identities=24% Similarity=0.338 Sum_probs=208.9
Q ss_pred hHhCcccceEEEEEEECC------eEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEE
Q 005999 395 ELLGRGSIGTTYKAVLDN------HLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYD 467 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 467 (665)
+.||+|+||.||+|.... ...||+|.+..... ....+.+.+|+.+++++ +||||+++++++.+.+..++|||
T Consensus 52 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 130 (333)
T 2i1m_A 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH-ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130 (333)
T ss_dssp EEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC-hHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence 679999999999998643 24799999976543 24457789999999999 89999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecc
Q 005999 468 YQPNGSLFNLIHGSRS---------IRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYC 538 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfg 538 (665)
|+++|+|.+++..... .....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 131 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg 209 (333)
T 2i1m_A 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHVAKIGDFG 209 (333)
T ss_dssp CCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGCEEEGGGEEEBCCCG
T ss_pred cCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCcccceEEECCCCeEEECccc
Confidence 9999999999874321 01345899999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCC-----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCC
Q 005999 539 LSVLSDSSS-----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDD 612 (665)
Q Consensus 539 l~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~ 612 (665)
++....... ....+|+.|+|||.+. +..++.++|||||||++|||+| |..||..... ...+...+.... ..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~-~~ 286 (333)
T 2i1m_A 210 LARDIMNDSNYIVKGNARLPVKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV-NSKFYKLVKDGY-QM 286 (333)
T ss_dssp GGCCGGGCTTSEECSSCEECGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS-SHHHHHHHHHTC-CC
T ss_pred cccccccccceeecCCCCCCccccCHHHhc-cCCCChHHHHHHHHHHHHHHHcCCCCCCcccch-hHHHHHHHhcCC-CC
Confidence 997553322 1223577899999987 5678999999999999999998 9999976321 223333333222 22
Q ss_pred CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhccc
Q 005999 613 GREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657 (665)
Q Consensus 613 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~ 657 (665)
..+...+..+.+++.+||+.||++|||+.|+++.|+++......+
T Consensus 287 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~ 331 (333)
T 2i1m_A 287 AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRE 331 (333)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhhcc
Confidence 234455678999999999999999999999999999988765544
No 139
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1e-39 Score=341.13 Aligned_cols=239 Identities=21% Similarity=0.310 Sum_probs=180.5
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCC-CCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS-HPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|... +++.||||++... ....+.+|+.+++++. ||||+++++++.+++..++||||+++|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 56999999999999975 6889999998643 3456778999999996 999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCC---ceEEeecccccccCCCC--
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADF---EARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~---~~kl~Dfgl~~~~~~~~-- 547 (665)
+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++ .+||+|||++.......
T Consensus 92 ~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 165 (325)
T 3kn6_A 92 ELFERIKK-----KKHFSETEASYIMRKLVSAVSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP 165 (325)
T ss_dssp BHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred cHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc
Confidence 99999974 356999999999999999999999999 99999999999997665 89999999997654432
Q ss_pred -CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCC--CccHHHHHHhhccCC---C--chhhhH
Q 005999 548 -VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLA--PPDMLEWVRTMRVDD---G--REENRL 619 (665)
Q Consensus 548 -~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~--~~~~~~~~~~~~~~~---~--~~~~~~ 619 (665)
....+|+.|+|||++. +..++.++|||||||++|||++|+.||...... .....+......... . .....+
T Consensus 166 ~~~~~~t~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s 244 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLN-QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVS 244 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSC
T ss_pred ccccCCCcCccCHHHhc-CCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCC
Confidence 2345799999999987 667899999999999999999999999764321 112222222222211 1 123457
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 620 GMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 620 ~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
..+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 245 QEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred HHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 78999999999999999999999874
No 140
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.4e-39 Score=331.61 Aligned_cols=243 Identities=20% Similarity=0.271 Sum_probs=200.1
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
.+.||+|+||.||+|... +++.||+|++............+.+|+..+.++ +||||+++++++.+++..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 367999999999999975 789999999987655555667788999999998 999999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCC-------------------Cce
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD-------------------FEA 532 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~-------------------~~~ 532 (665)
|+|.+++..... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.+ ..+
T Consensus 96 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (289)
T 1x8b_A 96 GSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMF 173 (289)
T ss_dssp CBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC--------------------CCCE
T ss_pred CcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-EeecCCCHHHEEEcCCCCCcccccccccccccCCceEE
Confidence 999999974321 1246899999999999999999999999 9999999999999844 479
Q ss_pred EEeecccccccCCCCCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC
Q 005999 533 RLTDYCLSVLSDSSSVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD 612 (665)
Q Consensus 533 kl~Dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~ 612 (665)
||+|||.+....... ...+|+.|+|||++.....++.++|||||||++|||++|.+|+.. .+....+..... .
T Consensus 174 kl~Dfg~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~-----~~~~~~~~~~~~-~ 246 (289)
T 1x8b_A 174 KIGDLGHVTRISSPQ-VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRN-----GDQWHEIRQGRL-P 246 (289)
T ss_dssp EECCCTTCEETTCSC-CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSS-----SHHHHHHHTTCC-C
T ss_pred EEcccccccccCCcc-ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcc-----hhHHHHHHcCCC-C
Confidence 999999997765543 346899999999987544677899999999999999999887643 122222222211 1
Q ss_pred CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 613 GREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 613 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
..+...+..+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 247 RIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 234456778999999999999999999999986
No 141
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.2e-39 Score=346.91 Aligned_cols=240 Identities=18% Similarity=0.263 Sum_probs=190.4
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHH-hCCCCCCeeeeeEEEEe----CCeEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAV-GGLSHPNLVPIRAYFQA----KGERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~~lv~e~ 468 (665)
+.||+|+||+||++... +++.||||++... ..+.+|++++ +..+||||++++++|.. .+..++||||
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~ 140 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC 140 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEe
Confidence 46999999999999965 6889999998632 2456777776 44589999999999876 5678999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCC---CCceEEeecccccccCC
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA---DFEARLTDYCLSVLSDS 545 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~---~~~~kl~Dfgl~~~~~~ 545 (665)
+++|+|.+++... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||++.....
T Consensus 141 ~~gg~L~~~l~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~ 216 (400)
T 1nxk_A 141 LDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216 (400)
T ss_dssp CCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-
T ss_pred CCCCcHHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCcceEEEecCCCCccEEEEecccccccCC
Confidence 9999999999853 2346999999999999999999999999 999999999999997 78999999999976654
Q ss_pred CC--CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCC--ccHHHHHHhhccCC--CchhhhH
Q 005999 546 SS--VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP--PDMLEWVRTMRVDD--GREENRL 619 (665)
Q Consensus 546 ~~--~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~ 619 (665)
.. ....||+.|+|||++. +..++.++|||||||++|||++|+.||....... ..+...+....... ......+
T Consensus 217 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s 295 (400)
T 1nxk_A 217 HNSLTTPCYTPYYVAPEVLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 295 (400)
T ss_dssp ----------CTTCCGGGSC-CCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSC
T ss_pred CCccccCCCCCCccCHhhcC-CCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCC
Confidence 32 3346899999999986 6789999999999999999999999997643322 12333333322221 1224567
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005999 620 GMLTEVASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 620 ~~l~~li~~cl~~dP~~RPt~~evl~~ 646 (665)
..+.+|+.+||+.||++|||+.|+++.
T Consensus 296 ~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 296 EEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 789999999999999999999999874
No 142
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-39 Score=343.35 Aligned_cols=242 Identities=21% Similarity=0.275 Sum_probs=194.2
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCC------eEEEEEE
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKG------ERLVIYD 467 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~e 467 (665)
+.||+|+||.||+|.. .+++.||||++..........+.+.+|+++++.++||||+++++++...+ ..++|||
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e 110 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMP 110 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEE
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEe
Confidence 5799999999999996 46889999999765554556678899999999999999999999997653 4699999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC
Q 005999 468 YQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 547 (665)
|+ +++|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 111 ~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 182 (367)
T 1cm8_A 111 FM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQADSEM 182 (367)
T ss_dssp CC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSSC
T ss_pred cC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCHHHEEEcCCCCEEEEeeeccccccccc
Confidence 99 7899999874 35899999999999999999999999 9999999999999999999999999998877665
Q ss_pred CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccC----------------
Q 005999 548 VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVD---------------- 611 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~---------------- 611 (665)
....+|+.|+|||++.+...++.++||||+||++|||++|+.||..... ...+..........
T Consensus 183 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~ 261 (367)
T 1cm8_A 183 TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH-LDQLKEIMKVTGTPPAEFVQRLQSDEAKNY 261 (367)
T ss_dssp CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHTCSCHHHHHH
T ss_pred CcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHHhhhHHHHHH
Confidence 6667899999999987556799999999999999999999999975321 01111111111000
Q ss_pred -------C-----CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 612 -------D-----GREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 612 -------~-----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
. ......+..+.+|+.+||..||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 262 MKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0 011234667999999999999999999999988
No 143
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.4e-39 Score=330.76 Aligned_cols=241 Identities=24% Similarity=0.400 Sum_probs=198.3
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|... ++..||+|++...... ....+.+.+|+.++++++||||+++++++.+.+..++||||+++|
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 94 (279)
T 3fdn_A 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 94 (279)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred eEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCC
Confidence 57999999999999865 5778999998654321 123567889999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC-CCCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS-VEDP 551 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-~~~~ 551 (665)
+|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ....
T Consensus 95 ~l~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~ 168 (279)
T 3fdn_A 95 TVYRELQK-----LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC 168 (279)
T ss_dssp EHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTTT-CEECCCCGGGEEECTTSCEEECSCCEESCC--------C
T ss_pred cHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHhEEEcCCCCEEEEeccccccCCcccccccC
Confidence 99999874 245899999999999999999999999 9999999999999999999999999986554332 3346
Q ss_pred CCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHccc
Q 005999 552 DTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSL 631 (665)
Q Consensus 552 gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 631 (665)
+|+.|+|||.+. +..++.++||||||+++|||++|+.||... ...+....+... ....+...+..+.+++.+||+
T Consensus 169 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~ 243 (279)
T 3fdn_A 169 GTLDYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--TYQETYKRISRV--EFTFPDFVTEGARDLISRLLK 243 (279)
T ss_dssp CCCTTCCHHHHT-TCCCCTTHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHHT--CCCCCTTSCHHHHHHHHHHCC
T ss_pred CCCCccCHhHhc-cCCCCccchhHhHHHHHHHHHHCCCCCCCC--cHHHHHHHHHhC--CCCCCCcCCHHHHHHHHHHhc
Confidence 899999999987 667899999999999999999999999752 112222222222 222344567789999999999
Q ss_pred CCCCCCCCHHHHHHH
Q 005999 632 KSPEQRPAMWQVLKM 646 (665)
Q Consensus 632 ~dP~~RPt~~evl~~ 646 (665)
.||++|||+.|+++.
T Consensus 244 ~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 244 HNPSQRPMLREVLEH 258 (279)
T ss_dssp SSGGGSCCHHHHHHC
T ss_pred cChhhCCCHHHHhhC
Confidence 999999999999974
No 144
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=6.7e-40 Score=365.29 Aligned_cols=249 Identities=26% Similarity=0.432 Sum_probs=207.8
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCCH
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 474 (665)
+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+++|++++||||+++++++.+ +..++||||+.+|+|
T Consensus 273 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL 348 (535)
T 2h8h_A 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 348 (535)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEH
T ss_pred eecccCCCeEEEEEEECCCceEEEEEeCCCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcH
Confidence 5799999999999999888889999997654 235678999999999999999999999876 678999999999999
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC----CCCC
Q 005999 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS----SVED 550 (665)
Q Consensus 475 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~----~~~~ 550 (665)
.++++.. ....+++..++.|+.||+.||+|||+++ |+||||||+|||+++++.+||+|||++...... ....
T Consensus 349 ~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 424 (535)
T 2h8h_A 349 LDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 424 (535)
T ss_dssp HHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCST
T ss_pred HHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCC
Confidence 9999742 2245899999999999999999999999 999999999999999999999999999766432 1223
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
.++..|+|||++. ...++.++|||||||++|||++ |+.||... ...++...+..... ...+..++..+.+|+.+|
T Consensus 425 ~~~~~y~aPE~~~-~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~--~~~~~~~~i~~~~~-~~~~~~~~~~l~~li~~c 500 (535)
T 2h8h_A 425 KFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM--VNREVLDQVERGYR-MPCPPECPESLHDLMCQC 500 (535)
T ss_dssp TSCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC--CHHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHH
T ss_pred cCcccccCHHHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHH
Confidence 4678899999987 5679999999999999999999 99999753 22234433332211 123456678899999999
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHhhhc
Q 005999 630 SLKSPEQRPAMWQVLKMIQEIKESVM 655 (665)
Q Consensus 630 l~~dP~~RPt~~evl~~L~~~~~~~~ 655 (665)
|+.||++|||+.++++.|+.+.....
T Consensus 501 l~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 501 WRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp TCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred cCCChhHCcCHHHHHHHHHHHhhccC
Confidence 99999999999999999998765443
No 145
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2e-39 Score=359.46 Aligned_cols=244 Identities=20% Similarity=0.278 Sum_probs=203.5
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|... +++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++||||++||
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg 269 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG 269 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCC
Confidence 57999999999999975 7899999999654321 223456889999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC--CCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS--VED 550 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~--~~~ 550 (665)
+|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++++||+|||++....... ...
T Consensus 270 ~L~~~l~~~---~~~~l~e~~~~~i~~qIl~aL~yLH~~g-IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~~ 345 (576)
T 2acx_A 270 DLKFHIYHM---GQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR 345 (576)
T ss_dssp BHHHHHHSS---SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEECC
T ss_pred cHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCchheEEEeCCCCeEEEecccceecccCcccccc
Confidence 999999743 2345899999999999999999999999 9999999999999999999999999997765432 334
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc--cHHHHHHhhccCCCchhhhHHHHHHHHHH
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP--DMLEWVRTMRVDDGREENRLGMLTEVASV 628 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 628 (665)
.||+.|+|||++. +..++.++|||||||++|||++|+.||........ .+...+... ....+...+..+.+++.+
T Consensus 346 ~GT~~Y~APEvl~-~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~--~~~~p~~~s~~~~dLI~~ 422 (576)
T 2acx_A 346 VGTVGYMAPEVVK-NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV--PEEYSERFSPQARSLCSQ 422 (576)
T ss_dssp CSCGGGCCHHHHT-TCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC--CCCCCTTSCHHHHHHHHH
T ss_pred CCCccccCHHHHc-CCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc--cccCCccCCHHHHHHHHH
Confidence 7999999999987 56789999999999999999999999986432211 233333322 222345667889999999
Q ss_pred cccCCCCCCC-----CHHHHHH
Q 005999 629 CSLKSPEQRP-----AMWQVLK 645 (665)
Q Consensus 629 cl~~dP~~RP-----t~~evl~ 645 (665)
||+.||++|| ++.|+++
T Consensus 423 lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 423 LLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HTCSSGGGSTTCSSSHHHHHHT
T ss_pred hccCCHHHcCCCCCCCHHHHHh
Confidence 9999999999 7888876
No 146
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.7e-39 Score=337.02 Aligned_cols=253 Identities=23% Similarity=0.283 Sum_probs=198.2
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|... +++.||+|++...... ....+.+.+|+.++++++||||+++++++..++..++||||++++
T Consensus 40 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 2h34_A 40 RLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGV 119 (309)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCE
T ss_pred EEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCC
Confidence 67999999999999965 7889999999765432 234577899999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC----C
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS----V 548 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~----~ 548 (665)
+|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... .
T Consensus 120 ~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 193 (309)
T 2h34_A 120 DLAAMLRR-----QGPLAPPRAVAIVRQIGSALDAAHAAG-ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLG 193 (309)
T ss_dssp EHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSCCC-------------
T ss_pred CHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCc-CCcCCCChHHEEEcCCCCEEEecCccCcccccccccccc
Confidence 99999974 246899999999999999999999999 9999999999999999999999999987654432 2
Q ss_pred CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccC-CCchhhhHHHHHHHHH
Q 005999 549 EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVD-DGREENRLGMLTEVAS 627 (665)
Q Consensus 549 ~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~ 627 (665)
...+++.|+|||++. +..++.++||||||+++|||++|+.||.... ...+...+...... .......+..+.+++.
T Consensus 194 ~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 270 (309)
T 2h34_A 194 NTVGTLYYMAPERFS-ESHATYRADIYALTCVLYECLTGSPPYQGDQ--LSVMGAHINQAIPRPSTVRPGIPVAFDAVIA 270 (309)
T ss_dssp ---CCGGGCCGGGTC-C----CCCHHHHHHHHHHHHHHSSCSSCSCH--HHHHHHHHHSCCCCGGGTSTTCCTHHHHHHH
T ss_pred ccCCCcCccCHHHHc-CCCCCchHhHHHHHHHHHHHHHCCCCCCCch--HHHHHHHhccCCCCccccCCCCCHHHHHHHH
Confidence 335899999999987 5678999999999999999999999997521 11222222211111 1123455678999999
Q ss_pred HcccCCCCCCC-CHHHHHHHHHHHHhhhcc
Q 005999 628 VCSLKSPEQRP-AMWQVLKMIQEIKESVMA 656 (665)
Q Consensus 628 ~cl~~dP~~RP-t~~evl~~L~~~~~~~~~ 656 (665)
+||+.||++|| +++++++.|+.+......
T Consensus 271 ~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~ 300 (309)
T 2h34_A 271 RGMAKNPEDRYVTCGDLSAAAHAALATADQ 300 (309)
T ss_dssp HHTCSSGGGSCSSHHHHHHHHHHTCC----
T ss_pred HhccCCHHHHHHhHHHHHHHHHHHHHhhcc
Confidence 99999999999 999999999988766543
No 147
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=8.5e-40 Score=353.91 Aligned_cols=245 Identities=15% Similarity=0.229 Sum_probs=198.5
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchh-hHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTAD-TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
.+.||+|+||+||+|... +++.||+|++....... ...+.+.+|+.++..++||||++++++|.+++..++||||+++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~g 158 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG 158 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCC
Confidence 367999999999999976 57899999986532211 1223478899999999999999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC----
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS---- 547 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~---- 547 (665)
|+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||++.......
T Consensus 159 g~L~~~l~~~----~~~l~e~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~ 233 (437)
T 4aw2_A 159 GDLLTLLSKF----EDRLPEEMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS 233 (437)
T ss_dssp CBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC
T ss_pred CcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCccc
Confidence 9999999742 356999999999999999999999999 9999999999999999999999999997654332
Q ss_pred CCCCCCCcccCCcccc----CCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhc--cC-CCchhhhHH
Q 005999 548 VEDPDTVAYKAPEIRK----SSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMR--VD-DGREENRLG 620 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~----~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~ 620 (665)
....||+.|+|||++. +...++.++|||||||++|||++|+.||... ...+....+.... .. .......+.
T Consensus 234 ~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~--~~~~~~~~i~~~~~~~~~p~~~~~~s~ 311 (437)
T 4aw2_A 234 SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE--SLVETYGKIMNHKERFQFPTQVTDVSE 311 (437)
T ss_dssp CSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTHHHHCCCCSSCCCSCH
T ss_pred ccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC--ChhHHHHhhhhccccccCCcccccCCH
Confidence 2246899999999985 2456899999999999999999999999753 1222222222111 11 111234677
Q ss_pred HHHHHHHHcccCCCCC--CCCHHHHHH
Q 005999 621 MLTEVASVCSLKSPEQ--RPAMWQVLK 645 (665)
Q Consensus 621 ~l~~li~~cl~~dP~~--RPt~~evl~ 645 (665)
.+.+|+.+||..+|++ ||++.|+++
T Consensus 312 ~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 312 NAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred HHHHHHHHHhcccccccCCCCHHHHhC
Confidence 8999999999888888 999999986
No 148
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.4e-39 Score=340.78 Aligned_cols=243 Identities=17% Similarity=0.247 Sum_probs=188.4
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||+||+|... +++.||+|++..........+.+.+|++++++++||||+++++++.+++..++||||+.+ +
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 118 (329)
T 3gbz_A 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-D 118 (329)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCSE-E
T ss_pred EEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCCC-C
Confidence 67999999999999854 788999999976655445566788999999999999999999999999999999999985 9
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEe-----CCCCceEEeecccccccCCC--
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL-----GADFEARLTDYCLSVLSDSS-- 546 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill-----~~~~~~kl~Dfgl~~~~~~~-- 546 (665)
|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||+ ++++.+||+|||++......
T Consensus 119 L~~~~~~~-----~~~~~~~~~~i~~ql~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 192 (329)
T 3gbz_A 119 LKKYMDKN-----PDVSMRVIKSFLYQLINGVNFCHSRR-CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR 192 (329)
T ss_dssp HHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC----
T ss_pred HHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC-EECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc
Confidence 99999742 45899999999999999999999999 9999999999999 45556999999999765432
Q ss_pred -CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC------------
Q 005999 547 -SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG------------ 613 (665)
Q Consensus 547 -~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~------------ 613 (665)
.....+|+.|+|||++.....++.++|||||||++|||++|+.||..... ...+............
T Consensus 193 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (329)
T 3gbz_A 193 QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE-IDQLFKIFEVLGLPDDTTWPGVTALPDW 271 (329)
T ss_dssp -------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH-HHHHHHHHHHhCCCchhhhhhhhhhhhh
Confidence 22335799999999987555689999999999999999999999975311 1122222221111110
Q ss_pred ---------------chhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 614 ---------------REENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 614 ---------------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.....+..+.+|+.+||+.||++|||+.|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 272 KQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 01124567899999999999999999999986
No 149
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-39 Score=332.27 Aligned_cols=245 Identities=24% Similarity=0.359 Sum_probs=195.2
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
.+.||+|+||.||++... ++..+|+|++..... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 105 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGG 105 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCC
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCC
Confidence 367999999999999964 688999999876543 234577899999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEe---CCCCceEEeecccccccCCC--C
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYCLSVLSDSS--S 547 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill---~~~~~~kl~Dfgl~~~~~~~--~ 547 (665)
+|.+++..... ....+++..++.++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++...... .
T Consensus 106 ~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 183 (285)
T 3is5_A 106 ELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFHSQH-VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS 183 (285)
T ss_dssp BHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-------
T ss_pred cHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccC
Confidence 99998864211 2356899999999999999999999999 9999999999999 45678999999999765433 2
Q ss_pred CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC-CchhhhHHHHHHHH
Q 005999 548 VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD-GREENRLGMLTEVA 626 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li 626 (665)
....+|+.|+|||++. ..++.++||||||+++|||++|+.||.... ..+............ ......+..+.+++
T Consensus 184 ~~~~~t~~y~aPE~~~--~~~~~~~Di~slG~il~~ll~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 259 (285)
T 3is5_A 184 TNAAGTALYMAPEVFK--RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS--LEEVQQKATYKEPNYAVECRPLTPQAVDLL 259 (285)
T ss_dssp ---CTTGGGCCHHHHT--TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHCCCCCCC--CCCCHHHHHHH
T ss_pred cCcccccCcCChHHhc--cCCCcccCeehHHHHHHHHHhCCCCCCCCC--HHHHHhhhccCCcccccccCcCCHHHHHHH
Confidence 3346899999999885 468999999999999999999999997531 122222222211111 11223567799999
Q ss_pred HHcccCCCCCCCCHHHHHH
Q 005999 627 SVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 627 ~~cl~~dP~~RPt~~evl~ 645 (665)
.+||+.||++|||+.|+++
T Consensus 260 ~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 260 KQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHTCSCTTTSCCHHHHHT
T ss_pred HHHccCChhhCcCHHHHhc
Confidence 9999999999999999985
No 150
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-39 Score=347.61 Aligned_cols=242 Identities=22% Similarity=0.300 Sum_probs=187.1
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCC-CCCeeeeeEEEEeCC--eEEEEEEecC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS-HPNLVPIRAYFQAKG--ERLVIYDYQP 470 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~~lv~e~~~ 470 (665)
+.||+|+||.||+|.. .+++.||||++..........+.+.+|+.++.++. ||||+++++++...+ ..++||||+.
T Consensus 15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~ 94 (388)
T 3oz6_A 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME 94 (388)
T ss_dssp EC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS
T ss_pred EEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC
Confidence 5799999999999986 46889999999766554566677889999999997 999999999997644 7899999998
Q ss_pred CCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC----
Q 005999 471 NGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS---- 546 (665)
Q Consensus 471 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~---- 546 (665)
|+|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 95 -~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 166 (388)
T 3oz6_A 95 -TDLHAVIRA------NILEPVHKQYVVYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVT 166 (388)
T ss_dssp -EEHHHHHHH------TCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCC
T ss_pred -cCHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHeEEcCCCCEEecCCccccccccccccc
Confidence 599999874 35899999999999999999999999 999999999999999999999999999754321
Q ss_pred --------------------CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc-cHHHHH
Q 005999 547 --------------------SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP-DMLEWV 605 (665)
Q Consensus 547 --------------------~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~-~~~~~~ 605 (665)
.....||+.|+|||++.+...++.++||||+||++|||++|++||.... .. .+...+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--~~~~~~~i~ 244 (388)
T 3oz6_A 167 NNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS--TMNQLERII 244 (388)
T ss_dssp CCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHH
T ss_pred ccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHH
Confidence 1223589999999998755679999999999999999999999997532 11 111111
Q ss_pred HhhccCC--------------------------------------------CchhhhHHHHHHHHHHcccCCCCCCCCHH
Q 005999 606 RTMRVDD--------------------------------------------GREENRLGMLTEVASVCSLKSPEQRPAMW 641 (665)
Q Consensus 606 ~~~~~~~--------------------------------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 641 (665)
.....+. ......+..+.+|+.+||+.||++|||+.
T Consensus 245 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~ 324 (388)
T 3oz6_A 245 GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISAN 324 (388)
T ss_dssp HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHH
Confidence 1111000 00113456789999999999999999999
Q ss_pred HHHHH
Q 005999 642 QVLKM 646 (665)
Q Consensus 642 evl~~ 646 (665)
|+++.
T Consensus 325 e~l~H 329 (388)
T 3oz6_A 325 DALKH 329 (388)
T ss_dssp HHTTS
T ss_pred HHhCC
Confidence 99875
No 151
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.2e-39 Score=339.02 Aligned_cols=255 Identities=19% Similarity=0.319 Sum_probs=203.2
Q ss_pred hHhCcccceEEEEEEE-----CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEE--eCCeEEEEEE
Q 005999 395 ELLGRGSIGTTYKAVL-----DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ--AKGERLVIYD 467 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~lv~e 467 (665)
+.||+|+||.||++.+ .++..||+|++.... ....+.+.+|++++++++||||+++++++. +....++|||
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEe
Confidence 6799999999999984 468899999997654 345567899999999999999999999987 4567899999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC
Q 005999 468 YQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 547 (665)
|+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 107 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 181 (327)
T 3lxl_A 107 YLPSGCLRDFLQRH----RARLDASRLLLYSSQICKGMEYLGSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181 (327)
T ss_dssp CCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCGGGCEECCTTC
T ss_pred ecCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChhhEEECCCCCEEEcccccceecccCC
Confidence 99999999999742 245899999999999999999999999 9999999999999999999999999997664322
Q ss_pred ------CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCC----------CCccHHHHHHhhcc-
Q 005999 548 ------VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYL----------APPDMLEWVRTMRV- 610 (665)
Q Consensus 548 ------~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~----------~~~~~~~~~~~~~~- 610 (665)
....+|..|+|||++. +..++.++||||||+++|||++|+.||..... ..............
T Consensus 182 ~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (327)
T 3lxl_A 182 DYYVVREPGQSPIFWYAPESLS-DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG 260 (327)
T ss_dssp SEEECSSCCCSCGGGSCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT
T ss_pred ccceeeccCCccccccCHHHhc-cCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc
Confidence 2234788899999987 56789999999999999999999999864211 01111111111111
Q ss_pred -CCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhccc
Q 005999 611 -DDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMAE 657 (665)
Q Consensus 611 -~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~ 657 (665)
....+...+..+.+++.+||+.||++|||+.|+++.|+.+.......
T Consensus 261 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 261 QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 11234566788999999999999999999999999999987655443
No 152
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=339.29 Aligned_cols=254 Identities=20% Similarity=0.294 Sum_probs=201.7
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEe----CCeEEEEEEec
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA----KGERLVIYDYQ 469 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~ 469 (665)
+.||+|+||.||++.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.. ....++||||+
T Consensus 35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHE--QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFF 112 (317)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred EEecCCCCeEEEEEEecCCCcEEEEEEEecCC--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence 6799999999999996 578899999986543 3456778999999999999999999999873 34788999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCCC-
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSV- 548 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~- 548 (665)
.+|+|.+++..... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 113 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~ 190 (317)
T 2buj_A 113 KRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHAKG-YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG 190 (317)
T ss_dssp TTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCSSCEESCEEEES
T ss_pred CCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCCEEEEecCcchhccccccc
Confidence 99999999875321 3456999999999999999999999999 99999999999999999999999998865432111
Q ss_pred -----------CCCCCCcccCCccccCCC--CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCch
Q 005999 549 -----------EDPDTVAYKAPEIRKSSR--RATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGRE 615 (665)
Q Consensus 549 -----------~~~gt~~y~aPE~~~~~~--~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (665)
...||+.|+|||++.... .++.++||||||+++|||++|+.||.............+.. .......
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~ 269 (317)
T 2buj_A 191 SRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN-QLSIPQS 269 (317)
T ss_dssp HHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC-C--CCCC
T ss_pred ccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc-cCCCCcc
Confidence 123689999999886322 26889999999999999999999986422222233332222 1112223
Q ss_pred hhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhh
Q 005999 616 ENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKES 653 (665)
Q Consensus 616 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 653 (665)
...+..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 270 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 270 PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred ccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 45677899999999999999999999999999887543
No 153
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4.3e-40 Score=353.56 Aligned_cols=243 Identities=18% Similarity=0.241 Sum_probs=198.1
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|... +++.||+|++...... ....+.+.+|+.+++.++||||++++++|.+++..++||||++||
T Consensus 75 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg 154 (410)
T 3v8s_A 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG 154 (410)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred EEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 57999999999999975 5889999998653211 112345788999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC----C
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS----V 548 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~----~ 548 (665)
+|.++++. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||++....... .
T Consensus 155 ~L~~~l~~------~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 227 (410)
T 3v8s_A 155 DLVNLMSN------YDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD 227 (410)
T ss_dssp EHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECC
T ss_pred cHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeeECCCCCEEEeccceeEeeccCCccccc
Confidence 99999974 24889999999999999999999999 9999999999999999999999999997665432 2
Q ss_pred CCCCCCcccCCccccCCC---CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhc--cCCCchhhhHHHHH
Q 005999 549 EDPDTVAYKAPEIRKSSR---RATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMR--VDDGREENRLGMLT 623 (665)
Q Consensus 549 ~~~gt~~y~aPE~~~~~~---~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~ 623 (665)
...||+.|+|||++.... .++.++|||||||++|||++|+.||... ........+.... .........+..+.
T Consensus 228 ~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~--~~~~~~~~i~~~~~~~~~p~~~~~s~~~~ 305 (410)
T 3v8s_A 228 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--SLVGTYSKIMNHKNSLTFPDDNDISKEAK 305 (410)
T ss_dssp SCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTHHHHCCCCTTCCCCHHHH
T ss_pred CCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC--ChhhHHHHHHhccccccCCCcccccHHHH
Confidence 446999999999987322 1788999999999999999999999752 1222222222211 11122335677899
Q ss_pred HHHHHcccCCCCC--CCCHHHHHHH
Q 005999 624 EVASVCSLKSPEQ--RPAMWQVLKM 646 (665)
Q Consensus 624 ~li~~cl~~dP~~--RPt~~evl~~ 646 (665)
+|+.+||..+|++ ||++.|+++.
T Consensus 306 ~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 306 NLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred HHHHHHccChhhhCCCCCHHHHhcC
Confidence 9999999999988 9999999873
No 154
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4.4e-39 Score=355.93 Aligned_cols=246 Identities=17% Similarity=0.236 Sum_probs=202.5
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|... +++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++||||++||
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg 270 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG 270 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCC
Confidence 46999999999999975 6899999999654321 123467889999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC---CC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS---VE 549 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~---~~ 549 (665)
+|.+++..... ....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++++||+|||++....... ..
T Consensus 271 ~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g-IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~ 348 (543)
T 3c4z_A 271 DIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348 (543)
T ss_dssp BHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCC
T ss_pred CHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHcC-CcccCCChHHEEEeCCCCEEEeecceeeeccCCCccccc
Confidence 99999875321 2456999999999999999999999999 9999999999999999999999999997765432 22
Q ss_pred CCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCC--ccHHHHHHhhccCCCchhhhHHHHHHHHH
Q 005999 550 DPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP--PDMLEWVRTMRVDDGREENRLGMLTEVAS 627 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 627 (665)
..||+.|+|||++. +..++.++|||||||++|||++|+.||....... ..+...+.. .....+...+..+.+++.
T Consensus 349 ~~GT~~Y~APE~l~-~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~--~~~~~p~~~s~~~~~li~ 425 (543)
T 3c4z_A 349 YAGTPGFMAPELLL-GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE--QAVTYPDKFSPASKDFCE 425 (543)
T ss_dssp CCSCTTTSCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHH--CCCCCCTTSCHHHHHHHH
T ss_pred ccCCccccChhhhc-CCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhh--cccCCCcccCHHHHHHHH
Confidence 36899999999987 5679999999999999999999999997643221 122222222 122334566788999999
Q ss_pred HcccCCCCCCCCH-----HHHHH
Q 005999 628 VCSLKSPEQRPAM-----WQVLK 645 (665)
Q Consensus 628 ~cl~~dP~~RPt~-----~evl~ 645 (665)
+||+.||++||++ .|+++
T Consensus 426 ~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 426 ALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp HHSCSSGGGSCCCBTTBSHHHHT
T ss_pred HhccCCHhHCCCCcccCHHHHHc
Confidence 9999999999975 56654
No 155
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.2e-39 Score=341.11 Aligned_cols=245 Identities=20% Similarity=0.313 Sum_probs=201.1
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|... +++.||+|++..........+.+.+|+.++.++ +||||+++++++.+.+..++||||+.+|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 67999999999999965 688999999987655445567889999999999 5699999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCC---CCceEEeecccccccCCCC--
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA---DFEARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~---~~~~kl~Dfgl~~~~~~~~-- 547 (665)
+|.+++... ....+++..++.++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++.......
T Consensus 115 ~L~~~~~~~---~~~~~~~~~~~~i~~ql~~~L~~LH~~g-ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 190 (327)
T 3lm5_A 115 EIFSLCLPE---LAEMVSENDVIRLIKQILEGVYYLHQNN-IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL 190 (327)
T ss_dssp EGGGGGSSC---C-CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC------
T ss_pred cHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCChHHEEEecCCCCCcEEEeeCccccccCCcccc
Confidence 999998632 3456999999999999999999999999 999999999999997 7899999999997765432
Q ss_pred CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC--CchhhhHHHHHHH
Q 005999 548 VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD--GREENRLGMLTEV 625 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l 625 (665)
....+|+.|+|||++. +..++.++|||||||++|||++|+.||.... ..+....+....... ......+..+.++
T Consensus 191 ~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 267 (327)
T 3lm5_A 191 REIMGTPEYLAPEILN-YDPITTATDMWNIGIIAYMLLTHTSPFVGED--NQETYLNISQVNVDYSEETFSSVSQLATDF 267 (327)
T ss_dssp ---CCCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTCCCCCTTTTTTSCHHHHHH
T ss_pred ccccCCcCccCCeeec-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--chHHHHHHHhcccccCchhhcccCHHHHHH
Confidence 2346899999999987 6678999999999999999999999997531 222222222222211 2334567789999
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 005999 626 ASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 626 i~~cl~~dP~~RPt~~evl~~ 646 (665)
+.+||+.||++|||+.|+++.
T Consensus 268 i~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 268 IQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHcCCChhhCcCHHHHhCC
Confidence 999999999999999999863
No 156
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.7e-39 Score=345.03 Aligned_cols=238 Identities=20% Similarity=0.267 Sum_probs=188.2
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCch-hhHHHHHHHHHHH-HhCCCCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA-DTSAEAFEQHMEA-VGGLSHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
+.||+|+||.||+|..+ ++..||+|+++..... ....+.+.+|..+ ++.++||||+++++++.+.+..|+||||+++
T Consensus 44 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~g 123 (373)
T 2r5t_A 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 123 (373)
T ss_dssp EEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCC
Confidence 67999999999999975 5888999999765432 2234456667766 5778999999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCC---CCC
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDS---SSV 548 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~---~~~ 548 (665)
|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+|||++..... ...
T Consensus 124 g~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~ 197 (373)
T 2r5t_A 124 GELFYHLQR-----ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTS 197 (373)
T ss_dssp CBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCC
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEeeCccccccccCCCccc
Confidence 999999974 345889999999999999999999999 99999999999999999999999999975322 223
Q ss_pred CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHH
Q 005999 549 EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASV 628 (665)
Q Consensus 549 ~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 628 (665)
...||+.|+|||++. +..++.++|||||||++|||++|+.||... ...++...+... ....+...+..+.+++.+
T Consensus 198 ~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~G~~Pf~~~--~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~ 272 (373)
T 2r5t_A 198 TFCGTPEYLAPEVLH-KQPYDRTVDWWCLGAVLYEMLYGLPPFYSR--NTAEMYDNILNK--PLQLKPNITNSARHLLEG 272 (373)
T ss_dssp SBSCCCCCCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCTTCCS--BHHHHHHHHHHS--CCCCCSSSCHHHHHHHHH
T ss_pred cccCCccccCHHHhC-CCCCCchhhhHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHhc--ccCCCCCCCHHHHHHHHH
Confidence 346899999999987 667999999999999999999999999752 112232222221 222344567789999999
Q ss_pred cccCCCCCCCCHHHH
Q 005999 629 CSLKSPEQRPAMWQV 643 (665)
Q Consensus 629 cl~~dP~~RPt~~ev 643 (665)
||+.||++||++.+.
T Consensus 273 lL~~dp~~R~~~~~~ 287 (373)
T 2r5t_A 273 LLQKDRTKRLGAKDD 287 (373)
T ss_dssp HTCSSGGGSTTTTTT
T ss_pred HcccCHHhCCCCCCC
Confidence 999999999998643
No 157
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9e-40 Score=344.45 Aligned_cols=249 Identities=19% Similarity=0.237 Sum_probs=195.6
Q ss_pred HhHhCcccceEEEEEEE-CCeEEEEEEEecCCCc---hhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEec
Q 005999 394 AELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKT---ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQ 469 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 469 (665)
.+.||+|+||.||+|.. .++..||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 110 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELC 110 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCC
Confidence 46799999999999996 4688899999865421 2245578899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCC-----------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCe
Q 005999 470 PNGSLFNLIHGSRSI-----------------------------------RAKPLHWTSCLKIAEDVAQGLAYIHRASWL 514 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~i~~~L~yLH~~~~i 514 (665)
++|+|.+++...... ....+++..++.++.||+.||+|||+.+ |
T Consensus 111 ~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i 189 (345)
T 3hko_A 111 HGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG-I 189 (345)
T ss_dssp CSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTT-E
T ss_pred CCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-c
Confidence 999999998521100 0122467778899999999999999999 9
Q ss_pred eccCCCCCceEeCCCC--ceEEeecccccccCCC-------CCCCCCCCcccCCccccC-CCCCCCcchHHHHHHHHHHH
Q 005999 515 IHGNLKSSNVLLGADF--EARLTDYCLSVLSDSS-------SVEDPDTVAYKAPEIRKS-SRRATSKSDVYAFGVLLLEL 584 (665)
Q Consensus 515 iH~Dlk~~Nill~~~~--~~kl~Dfgl~~~~~~~-------~~~~~gt~~y~aPE~~~~-~~~~~~k~DvwSlGvvl~el 584 (665)
+||||||+||+++.++ .+||+|||++...... .....||+.|+|||++.. ...++.++|||||||++|||
T Consensus 190 vH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el 269 (345)
T 3hko_A 190 CHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLL 269 (345)
T ss_dssp ECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHH
T ss_pred cccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHH
Confidence 9999999999998776 8999999999754321 123458999999999863 25789999999999999999
Q ss_pred HhCCCCCCCCCCCCccHHHHHHhhccCC--CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 585 LTGKHPSQHPYLAPPDMLEWVRTMRVDD--GREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 585 ltg~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
++|+.||.... ..+....+....... ......+..+.+++.+||+.||++|||+.|+++
T Consensus 270 ~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 270 LMGAVPFPGVN--DADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHSSCSSCCSS--HHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHCCCCCCCCC--hHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 99999997532 122222222211111 123345778999999999999999999999987
No 158
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.4e-39 Score=338.20 Aligned_cols=244 Identities=20% Similarity=0.290 Sum_probs=196.9
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||||+.+++
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 110 (331)
T 4aaa_A 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTI 110 (331)
T ss_dssp EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEH
T ss_pred eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcch
Confidence 57999999999999975 58899999997766555566778899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC---CCCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS---SVED 550 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~---~~~~ 550 (665)
|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ....
T Consensus 111 l~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 184 (331)
T 4aaa_A 111 LDDLELF-----PNGLDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE 184 (331)
T ss_dssp HHHHHHS-----TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCTTC------------C
T ss_pred HHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHHCC-EEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCC
Confidence 9988763 345899999999999999999999999 999999999999999999999999999765432 2334
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccC---------------C---
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVD---------------D--- 612 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~---------------~--- 612 (665)
.+|+.|+|||++.+...++.++|||||||++|||++|+.||..... ...+.......... .
T Consensus 185 ~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (331)
T 4aaa_A 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD-IDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL 263 (331)
T ss_dssp CCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCC
T ss_pred cCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCChhhhhHhhhccccccccC
Confidence 6899999999987555789999999999999999999999976321 11111111110000 0
Q ss_pred ------C----chhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 613 ------G----REENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 613 ------~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
. .....+..+.+++.+||+.||++|||+.|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 264 PEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 01234678999999999999999999999987
No 159
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.1e-39 Score=332.76 Aligned_cols=247 Identities=20% Similarity=0.247 Sum_probs=188.8
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|.. .+++.||+|++..........+.+.++...++.++||||+++++++.+++..++||||+.+ +
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 91 (290)
T 3fme_A 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-S 91 (290)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE-E
T ss_pred HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc-c
Confidence 5799999999999996 5789999999987655444455566666678889999999999999999999999999975 8
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCCceEeCCCCceEEeecccccccCCCC--CCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA-SWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS--VED 550 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~--~~~ 550 (665)
|.+++..... ....+++..++.++.|++.||+|||++ + |+||||||+||+++.++.+||+|||++....... ...
T Consensus 92 l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 169 (290)
T 3fme_A 92 LDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID 169 (290)
T ss_dssp HHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHSC-CCCCCCSGGGCEECTTCCEEBCCC---------------
T ss_pred hHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecCCccccccccccccc
Confidence 8887753211 345699999999999999999999998 8 9999999999999999999999999997654432 223
Q ss_pred CCCCcccCCcccc---CCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHH
Q 005999 551 PDTVAYKAPEIRK---SSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVAS 627 (665)
Q Consensus 551 ~gt~~y~aPE~~~---~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 627 (665)
.+|+.|+|||++. ....++.++|||||||++|||++|+.||.........+...+... .........+..+.+++.
T Consensus 170 ~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~ 248 (290)
T 3fme_A 170 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP-SPQLPADKFSAEFVDFTS 248 (290)
T ss_dssp CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSC-CCCCCTTTSCHHHHHHHH
T ss_pred CCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccC-CCCcccccCCHHHHHHHH
Confidence 6899999999962 356789999999999999999999999975322222232222221 122233456778999999
Q ss_pred HcccCCCCCCCCHHHHHH
Q 005999 628 VCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 628 ~cl~~dP~~RPt~~evl~ 645 (665)
+||+.||++|||+.|+++
T Consensus 249 ~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 249 QCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHTCSSGGGSCCHHHHTT
T ss_pred HHhhcChhhCcCHHHHHh
Confidence 999999999999999988
No 160
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.1e-39 Score=353.96 Aligned_cols=241 Identities=18% Similarity=0.250 Sum_probs=192.4
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCc-hhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
.+.||+|+||.||+|... +++.||+|++..... .......+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~ 232 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 232 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCC
Confidence 367999999999999964 688999999875421 123345678899999999999999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCeeccCCCCCceEeCCCCceEEeecccccccCCC---C
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR-ASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS---S 547 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~-~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~---~ 547 (665)
|+|.+++.. ...+++..+..++.||+.||+|||+ .+ |+||||||+|||++.++++||+|||++...... .
T Consensus 233 ~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~g-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 306 (446)
T 4ejn_A 233 GELFFHLSR-----ERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 306 (446)
T ss_dssp CBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhhcCC-EEECCCCHHHEEECCCCCEEEccCCCceeccCCCccc
Confidence 999999974 3468999999999999999999998 88 999999999999999999999999999754322 2
Q ss_pred CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHH
Q 005999 548 VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVAS 627 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 627 (665)
....||+.|+|||++. +..++.++|||||||++|||++|+.||... ...++...+.. .....+...+..+.+++.
T Consensus 307 ~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~~~~~i~~--~~~~~p~~~~~~~~~li~ 381 (446)
T 4ejn_A 307 KTFCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ--DHEKLFELILM--EEIRFPRTLGPEAKSLLS 381 (446)
T ss_dssp CCSSSCGGGCCHHHHH-TSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHH--CCCCCCTTSCHHHHHHHH
T ss_pred ccccCCccccCHhhcC-CCCCCCccchhhhHHHHHHHhhCCCCCCCC--CHHHHHHHHHh--CCCCCCccCCHHHHHHHH
Confidence 3346899999999987 677999999999999999999999999752 12233333222 222234556778999999
Q ss_pred HcccCCCCCCC-----CHHHHHH
Q 005999 628 VCSLKSPEQRP-----AMWQVLK 645 (665)
Q Consensus 628 ~cl~~dP~~RP-----t~~evl~ 645 (665)
+||+.||++|| ++.|+++
T Consensus 382 ~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 382 GLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHcccCHHHhCCCCCCCHHHHHh
Confidence 99999999999 9999986
No 161
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=5.2e-39 Score=352.15 Aligned_cols=245 Identities=19% Similarity=0.246 Sum_probs=182.3
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEe-----CCeEEEEEE
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA-----KGERLVIYD 467 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~~~lv~e 467 (665)
.+.||+|+||+||+|... +++.||||++..........+.+.+|++++++++||||+++++++.. ....|+|||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 137 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE 137 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEC
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEe
Confidence 367999999999999854 78899999997665555567789999999999999999999999844 357899999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC-
Q 005999 468 YQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS- 546 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~- 546 (665)
|+ +|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||+++.....
T Consensus 138 ~~-~~~L~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~-iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 210 (458)
T 3rp9_A 138 IA-DSDFKKLFRT-----PVYLTELHIKTLLYNLLVGVKYVHSAG-ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPE 210 (458)
T ss_dssp CC-SEEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCT
T ss_pred cc-ccchhhhccc-----CCCCCHHHHHHHHHHHHHHHHHHHhCC-cCCCCCChhhEEECCCCCEeecccccchhccCcc
Confidence 98 4699999873 356999999999999999999999999 999999999999999999999999999765421
Q ss_pred -----------------------------CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-----------
Q 005999 547 -----------------------------SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT----------- 586 (665)
Q Consensus 547 -----------------------------~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt----------- 586 (665)
.....||+.|+|||++.....++.++|||||||++|||++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~ 290 (458)
T 3rp9_A 211 NGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHAD 290 (458)
T ss_dssp TCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGG
T ss_pred ccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccccc
Confidence 1223579999999987556779999999999999999999
Q ss_pred CCCCCCCCCCCC------------------ccHHHHHHh-hccCC----------------------------CchhhhH
Q 005999 587 GKHPSQHPYLAP------------------PDMLEWVRT-MRVDD----------------------------GREENRL 619 (665)
Q Consensus 587 g~~P~~~~~~~~------------------~~~~~~~~~-~~~~~----------------------------~~~~~~~ 619 (665)
|+++|....... .+....+.. ..... ......+
T Consensus 291 ~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 370 (458)
T 3rp9_A 291 RGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASS 370 (458)
T ss_dssp CCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSC
T ss_pred ccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCC
Confidence 555554321000 000011100 00000 0112336
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 620 GMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 620 ~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
..+.+|+.+||..||++|||+.|+++
T Consensus 371 ~~~~dLl~~mL~~dP~~R~t~~e~L~ 396 (458)
T 3rp9_A 371 ADAIHLLKRMLVFNPNKRITINECLA 396 (458)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHHhccCccccCCHHHHhc
Confidence 67899999999999999999999988
No 162
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=346.28 Aligned_cols=256 Identities=18% Similarity=0.260 Sum_probs=206.0
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCC--eEEEEEEecCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKG--ERLVIYDYQPN 471 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e~~~~ 471 (665)
+.||+|+||.||+|... +++.||||++..... ....+.+.+|++++++++||||+++++++.+.+ ..++||||+++
T Consensus 15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~ 93 (396)
T 4eut_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (396)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTT
T ss_pred EEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCC
Confidence 57999999999999975 588999999975432 233567789999999999999999999998755 78999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEe----CCCCceEEeecccccccCCCC
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL----GADFEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill----~~~~~~kl~Dfgl~~~~~~~~ 547 (665)
|+|.+++.... ....+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++.......
T Consensus 94 g~L~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~ 170 (396)
T 4eut_A 94 GSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170 (396)
T ss_dssp EEHHHHTTSGG--GTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG
T ss_pred CCHHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHHCC-EEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC
Confidence 99999997532 2234899999999999999999999999 9999999999999 778889999999997765432
Q ss_pred --CCCCCCCcccCCccccC-------CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc--cHHHHHHhhccCC----
Q 005999 548 --VEDPDTVAYKAPEIRKS-------SRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP--DMLEWVRTMRVDD---- 612 (665)
Q Consensus 548 --~~~~gt~~y~aPE~~~~-------~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~--~~~~~~~~~~~~~---- 612 (665)
....||+.|+|||++.. ...++.++|||||||++|||++|+.||........ +....+.......
T Consensus 171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~ 250 (396)
T 4eut_A 171 QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISG 250 (396)
T ss_dssp GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEE
T ss_pred ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchh
Confidence 23458999999998752 14577899999999999999999999975432222 2222222211110
Q ss_pred -------------------CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 613 -------------------GREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 613 -------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
......+..+.+++.+||+.||++||++.|+++.++++.+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 251 VQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp EECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred heeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 122456778999999999999999999999999999987753
No 163
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=7.1e-39 Score=354.27 Aligned_cols=247 Identities=23% Similarity=0.358 Sum_probs=199.6
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
.+.||+|+||+||+|... ++..||+|++..........+.+.+|+.++++++||||++++++|.+.+..++||||+.+|
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 121 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG 121 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 467999999999999975 6889999999766543444567899999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCC---CCceEEeecccccccCCCC--
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA---DFEARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~---~~~~kl~Dfgl~~~~~~~~-- 547 (665)
+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||++.......
T Consensus 122 ~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~ 195 (494)
T 3lij_A 122 ELFDEIIH-----RMKFNEVDAAVIIKQVLSGVTYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM 195 (494)
T ss_dssp BHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCB
T ss_pred cHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccc
Confidence 99998874 345899999999999999999999999 999999999999976 4559999999997665432
Q ss_pred CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC--chhhhHHHHHHH
Q 005999 548 VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG--REENRLGMLTEV 625 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l 625 (665)
....||+.|+|||++. ..++.++||||+||++|+|++|+.||... ...++...+........ .....+..+.++
T Consensus 196 ~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 271 (494)
T 3lij_A 196 KERLGTAYYIAPEVLR--KKYDEKCDVWSIGVILFILLAGYPPFGGQ--TDQEILRKVEKGKYTFDSPEWKNVSEGAKDL 271 (494)
T ss_dssp CCCCSCTTTCCHHHHT--TCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCSGGGTTSCHHHHHH
T ss_pred cccCCCcCeeCHHHHc--ccCCCchhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCCchhcccCCHHHHHH
Confidence 3446899999999986 46899999999999999999999999763 22344444443332221 234567789999
Q ss_pred HHHcccCCCCCCCCHHHHHHH--HHHH
Q 005999 626 ASVCSLKSPEQRPAMWQVLKM--IQEI 650 (665)
Q Consensus 626 i~~cl~~dP~~RPt~~evl~~--L~~~ 650 (665)
+.+||+.||++|||+.|+++. +++.
T Consensus 272 i~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 272 IKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp HHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred HHHHCCCChhhCccHHHHhcCcccccC
Confidence 999999999999999999863 4444
No 164
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=329.24 Aligned_cols=241 Identities=21% Similarity=0.352 Sum_probs=180.9
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|+.++++++||||+++++++.+.+..++||||++++
T Consensus 17 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 96 (278)
T 3cok_A 17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNG 96 (278)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCC
Confidence 5799999999999996 57889999998644321 123467889999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC---CC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS---VE 549 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~---~~ 549 (665)
+|.+++.. ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ..
T Consensus 97 ~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 171 (278)
T 3cok_A 97 EMNRYLKN----RVKPFSENEARHFMHQIITGMLYLHSHG-ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT 171 (278)
T ss_dssp EHHHHHHT----CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSSCCGGGEEECTTCCEEECCCTTCEECC--------
T ss_pred cHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCccee
Confidence 99999974 2356899999999999999999999999 9999999999999999999999999997654322 23
Q ss_pred CCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 550 DPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
..+|+.|+|||.+. +..++.++||||||+++|||++|+.||...... ..... ........+...+..+.+++.+|
T Consensus 172 ~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~li~~~ 246 (278)
T 3cok_A 172 LCGTPNYISPEIAT-RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK--NTLNK--VVLADYEMPSFLSIEAKDLIHQL 246 (278)
T ss_dssp ---------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------CCSSCCCCCTTSCHHHHHHHHHH
T ss_pred ccCCCCcCCcchhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH--HHHHH--HhhcccCCccccCHHHHHHHHHH
Confidence 45899999999987 567899999999999999999999999753221 11110 01111123345667899999999
Q ss_pred ccCCCCCCCCHHHHHH
Q 005999 630 SLKSPEQRPAMWQVLK 645 (665)
Q Consensus 630 l~~dP~~RPt~~evl~ 645 (665)
|+.||++|||+.|+++
T Consensus 247 l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 247 LRRNPADRLSLSSVLD 262 (278)
T ss_dssp SCSSGGGSCCHHHHTT
T ss_pred cccCHhhCCCHHHHhc
Confidence 9999999999999986
No 165
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3e-39 Score=337.06 Aligned_cols=253 Identities=23% Similarity=0.377 Sum_probs=206.2
Q ss_pred hHhCcccceEEEEEEEC------CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVLD------NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 468 (665)
+.||+|+||.||+|... .+..||+|.+..... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 109 (322)
T 1p4o_A 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 109 (322)
T ss_dssp EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC-HHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eEeccCCceEEEeeeecCccCCCCceEEEEEecccccC-HHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEe
Confidence 67999999999999854 478899999975543 24456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeeccccccc
Q 005999 469 QPNGSLFNLIHGSRS-----IRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLS 543 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~ 543 (665)
+++|+|.+++...+. .....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 110 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~NIli~~~~~~kl~Dfg~~~~~ 188 (322)
T 1p4o_A 110 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188 (322)
T ss_dssp CTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTCCCGG
T ss_pred CCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-CccCCCccceEEEcCCCeEEECcCcccccc
Confidence 999999999874221 11245789999999999999999999999 999999999999999999999999998755
Q ss_pred CCCC-----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhh
Q 005999 544 DSSS-----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREEN 617 (665)
Q Consensus 544 ~~~~-----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (665)
.... ....+|+.|+|||++. +..++.++||||||+++|||++ |+.||... ...+....+..... ......
T Consensus 189 ~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~~~-~~~~~~ 264 (322)
T 1p4o_A 189 YETDYYRKGGKGLLPVRWMSPESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFVMEGGL-LDKPDN 264 (322)
T ss_dssp GGGGCEEGGGSSEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS--CHHHHHHHHHTTCC-CCCCTT
T ss_pred ccccccccccCCCCCCCccChhhhc-cCCCCchhhHHHHHHHHHHHHhcCCCccccC--CHHHHHHHHHcCCc-CCCCCC
Confidence 3321 1223578899999987 5678999999999999999999 89998753 22233333322211 123456
Q ss_pred hHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhh
Q 005999 618 RLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKES 653 (665)
Q Consensus 618 ~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 653 (665)
.+..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 265 ~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 265 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 677899999999999999999999999999877543
No 166
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.7e-39 Score=335.22 Aligned_cols=252 Identities=21% Similarity=0.384 Sum_probs=204.8
Q ss_pred HhHhCcccceEEEEEEE-----CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCC--eEEEEE
Q 005999 394 AELLGRGSIGTTYKAVL-----DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKG--ERLVIY 466 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 466 (665)
.+.||+|+||.||++.+ .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 123 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 123 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC--SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEE
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEE
Confidence 36799999999999984 368899999997643 355678999999999999999999999987644 789999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC
Q 005999 467 DYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS 546 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 546 (665)
||+++++|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 124 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 124 EYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp CCCTTCBHHHHHHHS----TTSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred ECCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 999999999999753 345899999999999999999999999 999999999999999999999999999766543
Q ss_pred C------CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCC---------CCC-cc----HHHHHH
Q 005999 547 S------VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPY---------LAP-PD----MLEWVR 606 (665)
Q Consensus 547 ~------~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~---------~~~-~~----~~~~~~ 606 (665)
. ....++..|+|||.+. +..++.++||||||+++|||++|+.|+.... ... .. +.+.+.
T Consensus 199 ~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (326)
T 2w1i_A 199 KEYYKVKEPGESPIFWYAPESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 277 (326)
T ss_dssp CSEEECSSCCSCCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred ccccccccCCCCceeEECchhhc-CCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence 2 2234677899999987 5568899999999999999999999876421 000 01 111111
Q ss_pred hhccCCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 607 TMRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 607 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
... ....+...+..+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 278 ~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 278 NNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp TTC-CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCC-CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 111 11234556788999999999999999999999999999998765
No 167
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5e-39 Score=328.82 Aligned_cols=244 Identities=24% Similarity=0.351 Sum_probs=200.4
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEe--------------
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA-------------- 458 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------------- 458 (665)
.+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 89 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSR 89 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------C
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccc
Confidence 367999999999999976 78899999997543 246789999999999999999999864
Q ss_pred --CCeEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEee
Q 005999 459 --KGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTD 536 (665)
Q Consensus 459 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~D 536 (665)
....++||||+++|+|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 90 SKTKCLFIQMEFCDKGTLEQWIEKR---RGEKLDKVLALELFEQITKGVDYIHSKK-LINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp CEEEEEEEEECCCCSCBHHHHHHHG---GGSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECC
T ss_pred cCcceEEEEEeccCCCCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHEEEcCCCCEEECc
Confidence 44579999999999999999753 2356899999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCC--CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCc
Q 005999 537 YCLSVLSDSS--SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGR 614 (665)
Q Consensus 537 fgl~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 614 (665)
||++...... .....+|+.|+|||++. +..++.++||||||+++|||++|..|+... ......+.. ...
T Consensus 166 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~~~~~~~----~~~ 236 (284)
T 2a19_B 166 FGLVTSLKNDGKRTRSKGTLRYMSPEQIS-SQDYGKEVDLYALGLILAELLHVCDTAFET----SKFFTDLRD----GII 236 (284)
T ss_dssp CTTCEESSCCSCCCCCCSCCTTSCHHHHH-CSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----HHHHHHHHT----TCC
T ss_pred chhheeccccccccccCCcccccChhhhc-cCCCcchhhhHHHHHHHHHHHhcCCcchhH----HHHHHHhhc----ccc
Confidence 9998766543 23346899999999987 567899999999999999999999886421 112111111 112
Q ss_pred hhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcc
Q 005999 615 EENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMA 656 (665)
Q Consensus 615 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 656 (665)
....+..+.+++.+||+.||++|||+.|+++.|+.+......
T Consensus 237 ~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 237 SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 334566789999999999999999999999999998766543
No 168
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1e-38 Score=346.80 Aligned_cols=244 Identities=18% Similarity=0.239 Sum_probs=193.1
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeC-----CeEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAK-----GERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e~ 468 (665)
+.||+|+||.||+|... +++.||||++..........+.+.+|++++++++||||+++++++... ...++||||
T Consensus 32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~ 111 (432)
T 3n9x_A 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEI 111 (432)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEEC
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEec
Confidence 67999999999999964 688999999986655555677899999999999999999999999776 578999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC-
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS- 547 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~- 547 (665)
+. |+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 112 ~~-~~L~~~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 184 (432)
T 3n9x_A 112 AD-SDLKKLFKT-----PIFLTEEHIKTILYNLLLGENFIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKD 184 (432)
T ss_dssp CS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEEC-----
T ss_pred CC-cCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHeEECCCCCEEEccCCCccccccccc
Confidence 86 599999973 356999999999999999999999999 9999999999999999999999999997654321
Q ss_pred ------------------------CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCC---------
Q 005999 548 ------------------------VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHP--------- 594 (665)
Q Consensus 548 ------------------------~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~--------- 594 (665)
....||+.|+|||++.....++.++||||+||++|||++|..||...
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~ 264 (432)
T 3n9x_A 185 TNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFP 264 (432)
T ss_dssp --------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCC
T ss_pred ccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCC
Confidence 33468999999998755677999999999999999999865554321
Q ss_pred --CCC----------------Ccc-----------------------HHHHHHhhccCCC-----chhhhHHHHHHHHHH
Q 005999 595 --YLA----------------PPD-----------------------MLEWVRTMRVDDG-----REENRLGMLTEVASV 628 (665)
Q Consensus 595 --~~~----------------~~~-----------------------~~~~~~~~~~~~~-----~~~~~~~~l~~li~~ 628 (665)
..- ..+ ...++........ .....+..+.+|+.+
T Consensus 265 g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~ 344 (432)
T 3n9x_A 265 GSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLES 344 (432)
T ss_dssp CSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHH
T ss_pred CccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHH
Confidence 000 000 1111111100000 012356778999999
Q ss_pred cccCCCCCCCCHHHHHH
Q 005999 629 CSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 629 cl~~dP~~RPt~~evl~ 645 (665)
||+.||++|||+.|+++
T Consensus 345 mL~~dP~~R~ta~e~L~ 361 (432)
T 3n9x_A 345 MLKFNPNKRITIDQALD 361 (432)
T ss_dssp HSCSSTTTSCCHHHHHT
T ss_pred HhcCCcccCCCHHHHhc
Confidence 99999999999999987
No 169
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.3e-38 Score=333.19 Aligned_cols=249 Identities=22% Similarity=0.351 Sum_probs=200.9
Q ss_pred HhHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhC--CCCCCeeeeeEEEEeCC----eEEEEEE
Q 005999 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGG--LSHPNLVPIRAYFQAKG----ERLVIYD 467 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~lv~e 467 (665)
.+.||+|+||.||+|... ++.||+|++... ..+.+.+|++++.. ++||||+++++++.... ..++|||
T Consensus 47 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e 120 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 120 (342)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEEC
T ss_pred EeeecCCCCcEEEEEEEc-CccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEe
Confidence 467999999999999884 788999998643 23456778888776 79999999999998876 7899999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCeeccCCCCCceEeCCCCceEEeeccc
Q 005999 468 YQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH--------RASWLIHGNLKSSNVLLGADFEARLTDYCL 539 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH--------~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl 539 (665)
|+++|+|.+++.. ..+++..++.++.|++.||+||| +.+ |+||||||+||+++.++++||+|||+
T Consensus 121 ~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~ 193 (342)
T 1b6c_B 121 YHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGL 193 (342)
T ss_dssp CCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCSGGGEEECTTSCEEECCCTT
T ss_pred ecCCCcHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-eeeCCCCHHHEEECCCCCEEEEECCC
Confidence 9999999999974 24899999999999999999999 777 99999999999999999999999999
Q ss_pred ccccCCCC-------CCCCCCCcccCCccccCCCC-----CCCcchHHHHHHHHHHHHhC----------CCCCCCCCCC
Q 005999 540 SVLSDSSS-------VEDPDTVAYKAPEIRKSSRR-----ATSKSDVYAFGVLLLELLTG----------KHPSQHPYLA 597 (665)
Q Consensus 540 ~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~-----~~~k~DvwSlGvvl~elltg----------~~P~~~~~~~ 597 (665)
+....... ....+|+.|+|||++..... ++.++|||||||++|||++| +.||......
T Consensus 194 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~ 273 (342)
T 1b6c_B 194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 273 (342)
T ss_dssp CEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred ceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcC
Confidence 96654322 33468999999999873322 23689999999999999999 7788765433
Q ss_pred CccHHHHHHhhccC---CCc-----hhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhc
Q 005999 598 PPDMLEWVRTMRVD---DGR-----EENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVM 655 (665)
Q Consensus 598 ~~~~~~~~~~~~~~---~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 655 (665)
......+....... ... ....+..+.+++.+||+.||++|||+.|+++.|+.+.++..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 274 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred cccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence 33333333322211 111 23556789999999999999999999999999999987643
No 170
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.9e-40 Score=352.75 Aligned_cols=247 Identities=15% Similarity=0.177 Sum_probs=192.8
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCc-hhhHHHHHHHHH---HHHhCCCCCCeeeee-------EEEEeCCe-
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKT-ADTSAEAFEQHM---EAVGGLSHPNLVPIR-------AYFQAKGE- 461 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~---~~l~~l~h~niv~l~-------~~~~~~~~- 461 (665)
+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+ +.+++++||||++++ +++.+.+.
T Consensus 79 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 158 (377)
T 3byv_A 79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK 158 (377)
T ss_dssp EEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSC
T ss_pred ceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCc
Confidence 6799999999999994 6789999999975422 234567789999 566677899999998 77666542
Q ss_pred ----------------EEEEEEecCCCCHHHHHhcCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCc
Q 005999 462 ----------------RLVIYDYQPNGSLFNLIHGSRSI--RAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSN 523 (665)
Q Consensus 462 ----------------~~lv~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~N 523 (665)
.++||||+ +|+|.+++...... ....+++..++.|+.||+.||+|||+.+ |+||||||+|
T Consensus 159 ~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDikp~N 236 (377)
T 3byv_A 159 KMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTYLRPVD 236 (377)
T ss_dssp SEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGG
T ss_pred cccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHH
Confidence 78999999 67999999753211 1123456888899999999999999999 9999999999
Q ss_pred eEeCCCCceEEeecccccccCCCCCCCCCCCcccCCccccCCC-----------CCCCcchHHHHHHHHHHHHhCCCCCC
Q 005999 524 VLLGADFEARLTDYCLSVLSDSSSVEDPDTVAYKAPEIRKSSR-----------RATSKSDVYAFGVLLLELLTGKHPSQ 592 (665)
Q Consensus 524 ill~~~~~~kl~Dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~k~DvwSlGvvl~elltg~~P~~ 592 (665)
||++.++.+||+|||++...........| +.|+|||++. +. .++.++|||||||++|||++|+.||.
T Consensus 237 Ill~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~-~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 314 (377)
T 3byv_A 237 IVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEA-RRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPIT 314 (377)
T ss_dssp EEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHH-HHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred EEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhc-ccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCc
Confidence 99999999999999999876654455567 9999999987 44 68999999999999999999999997
Q ss_pred CCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHHHhh
Q 005999 593 HPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLK--MIQEIKES 653 (665)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~~~~~ 653 (665)
....... ... .. ......+..+.+++.+||+.||++|||+.|+++ .++++.+.
T Consensus 315 ~~~~~~~--~~~---~~---~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~ 369 (377)
T 3byv_A 315 KDAALGG--SEW---IF---RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTE 369 (377)
T ss_dssp -----CC--SGG---GG---SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHHH
T ss_pred ccccccc--hhh---hh---hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHHHH
Confidence 5321111 000 00 112345677999999999999999999999986 55555443
No 171
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.6e-39 Score=355.93 Aligned_cols=243 Identities=23% Similarity=0.337 Sum_probs=202.0
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
.+.||+|+||+||+|... +++.||||++..........+.+.+|++++++++||||+++++++.+.+..++||||+.+|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~ 106 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCC
Confidence 367999999999999965 7889999998654333344677899999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeC---CCCceEEeecccccccCCCC--
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLG---ADFEARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~---~~~~~kl~Dfgl~~~~~~~~-- 547 (665)
+|.+.+.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||++.......
T Consensus 107 ~L~~~~~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 180 (486)
T 3mwu_A 107 ELFDEIIK-----RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM 180 (486)
T ss_dssp BHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC---
T ss_pred cHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCcc
Confidence 99998874 246899999999999999999999999 99999999999995 45689999999997665432
Q ss_pred CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC--CchhhhHHHHHHH
Q 005999 548 VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD--GREENRLGMLTEV 625 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l 625 (665)
....||+.|+|||++. +.++.++||||+||++|+|++|+.||... ...++...+....... ......+..+.++
T Consensus 181 ~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 256 (486)
T 3mwu_A 181 KDRIGTAYYIAPEVLR--GTYDEKCDVWSAGVILYILLSGTPPFYGK--NEYDILKRVETGKYAFDLPQWRTISDDAKDL 256 (486)
T ss_dssp -CCTTGGGGCCGGGGG--SCCCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCSCSGGGGGSCHHHHHH
T ss_pred CCCcCCCCCCCHHHhC--CCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCCCcccCCCCHHHHHH
Confidence 3346899999999987 35899999999999999999999999753 2223444343332222 2234567789999
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 005999 626 ASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 626 i~~cl~~dP~~RPt~~evl~~ 646 (665)
+.+||+.||++|||+.|+++.
T Consensus 257 i~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 257 IRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp HHHHTCSSTTTSCCHHHHHHC
T ss_pred HHHHcCCChhhCcCHHHHhcC
Confidence 999999999999999999874
No 172
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=349.44 Aligned_cols=243 Identities=15% Similarity=0.219 Sum_probs=196.5
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||++..+ +++.||+|+++..... ....+.+.+|.+++..++||||++++++|.+.+..|+||||+++|
T Consensus 67 ~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg 146 (412)
T 2vd5_A 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGG 146 (412)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCC
Confidence 57999999999999975 7899999999653221 122345788999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC----C
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS----V 548 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~----~ 548 (665)
+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||++....... .
T Consensus 147 ~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~ 221 (412)
T 2vd5_A 147 DLLTLLSKF----GERIPAEMARFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSL 221 (412)
T ss_dssp BHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECS
T ss_pred cHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccCHHHeeecCCCCEEEeechhheeccCCCccccc
Confidence 999999742 246899999999999999999999999 9999999999999999999999999997665432 2
Q ss_pred CCCCCCcccCCccccC------CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhc--c-CCCchhhhH
Q 005999 549 EDPDTVAYKAPEIRKS------SRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMR--V-DDGREENRL 619 (665)
Q Consensus 549 ~~~gt~~y~aPE~~~~------~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~ 619 (665)
...||+.|+|||++.. ...++.++|||||||++|||++|+.||.... ..+....+.... . ........+
T Consensus 222 ~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~--~~~~~~~i~~~~~~~~~p~~~~~~s 299 (412)
T 2vd5_A 222 VAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS--TAETYGKIVHYKEHLSLPLVDEGVP 299 (412)
T ss_dssp SCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHTHHHHCCCC----CCC
T ss_pred eeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC--HHHHHHHHHhcccCcCCCccccCCC
Confidence 3468999999999862 3468999999999999999999999997531 222222222111 1 111234567
Q ss_pred HHHHHHHHHcccCCCCCC---CCHHHHHH
Q 005999 620 GMLTEVASVCSLKSPEQR---PAMWQVLK 645 (665)
Q Consensus 620 ~~l~~li~~cl~~dP~~R---Pt~~evl~ 645 (665)
..+.+++.+||. +|++| |+++|+++
T Consensus 300 ~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 300 EEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 789999999999 99998 68999875
No 173
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=7.9e-39 Score=338.23 Aligned_cols=243 Identities=19% Similarity=0.261 Sum_probs=194.9
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEe--------CCeEEEE
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA--------KGERLVI 465 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------~~~~~lv 465 (665)
+.||+|+||.||+|.. .+++.||+|++............+.+|++++++++||||+++++++.. .+..++|
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 102 (351)
T 3mi9_A 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLV 102 (351)
T ss_dssp EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEE
T ss_pred EEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEE
Confidence 6799999999999997 578899999987665444445677899999999999999999999987 4468999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCC
Q 005999 466 YDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDS 545 (665)
Q Consensus 466 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 545 (665)
|||+.+ +|.+.+... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 103 ~e~~~~-~l~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 176 (351)
T 3mi9_A 103 FDFCEH-DLAGLLSNV----LVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSL 176 (351)
T ss_dssp EECCSE-EHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCC
T ss_pred EeccCC-CHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCCEEEccchhcccccc
Confidence 999986 888877642 345999999999999999999999999 99999999999999999999999999976542
Q ss_pred C-------CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC--c-h
Q 005999 546 S-------SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG--R-E 615 (665)
Q Consensus 546 ~-------~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~--~-~ 615 (665)
. .....+|+.|+|||++.+...++.++|||||||++|||++|+.||.... .......+........ . .
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~ 254 (351)
T 3mi9_A 177 AKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT--EQHQLALISQLCGSITPEVWP 254 (351)
T ss_dssp CSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTST
T ss_pred cccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCChhhcc
Confidence 1 1223579999999998755668999999999999999999999997632 2222222222111110 0 0
Q ss_pred ---------------------------hhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 616 ---------------------------ENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 616 ---------------------------~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
...+..+.+|+.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 255 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 001456889999999999999999999987
No 174
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=5.5e-39 Score=341.34 Aligned_cols=246 Identities=15% Similarity=0.159 Sum_probs=199.0
Q ss_pred hHhCcccceEEEEEE------ECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCC---CCCeeeeeEEEEeCCeEEEE
Q 005999 395 ELLGRGSIGTTYKAV------LDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS---HPNLVPIRAYFQAKGERLVI 465 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv 465 (665)
+.||+|+||+||+|. ..+++.||+|++.... ...+.+|++++.+++ |+||+++++++..++..++|
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv 145 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLV 145 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEE
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEE
Confidence 579999999999993 5578899999997543 345667777777776 99999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCC-----------CCceEE
Q 005999 466 YDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA-----------DFEARL 534 (665)
Q Consensus 466 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~-----------~~~~kl 534 (665)
|||+++|+|.++++..+......+++..++.++.||+.||+|||+.+ |+||||||+|||++. ++.+||
T Consensus 146 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl 224 (365)
T 3e7e_A 146 GELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE-IIHGDIKPDNFILGNGFLEQDDEDDLSAGLAL 224 (365)
T ss_dssp ECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECGGGTCC------CTTEEE
T ss_pred EeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEecccccCccccccccCCEEE
Confidence 99999999999997543334567999999999999999999999999 999999999999998 899999
Q ss_pred eecccccccC---C--CCCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhc
Q 005999 535 TDYCLSVLSD---S--SSVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMR 609 (665)
Q Consensus 535 ~Dfgl~~~~~---~--~~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 609 (665)
+|||++.... . ......||+.|+|||++. +..++.++|||||||++|||+||+.||..........
T Consensus 225 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~-------- 295 (365)
T 3e7e_A 225 IDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLS-NKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKP-------- 295 (365)
T ss_dssp CCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHT-TCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEE--------
T ss_pred eeCchhhhhhccCCCceeeeecCCCCCCChHHhc-CCCCCccccHHHHHHHHHHHHhCCCccccCCCCceee--------
Confidence 9999996543 1 123346899999999987 5678999999999999999999999986432111110
Q ss_pred cCCCchhhhHHHHHHHHHHcccCCCCCC-CCHHHHHHHHHHHHhhhc
Q 005999 610 VDDGREENRLGMLTEVASVCSLKSPEQR-PAMWQVLKMIQEIKESVM 655 (665)
Q Consensus 610 ~~~~~~~~~~~~l~~li~~cl~~dP~~R-Pt~~evl~~L~~~~~~~~ 655 (665)
............+.+++..|++.+|.+| |+++++.+.|+++.+...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~ 342 (365)
T 3e7e_A 296 EGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY 342 (365)
T ss_dssp CSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred chhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhh
Confidence 0000111235568899999999999999 789999999998877643
No 175
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.4e-39 Score=342.25 Aligned_cols=244 Identities=20% Similarity=0.293 Sum_probs=198.4
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|... ++..||+|++..... ....+.+.+|+.++++++||||+++++++.+++..++||||+++|+
T Consensus 39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 117 (360)
T 3eqc_A 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 117 (360)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECCCC-HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEeccccC-HHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCC
Confidence 57999999999999975 688999999976543 3456778999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCCceEeCCCCceEEeecccccccCC-CCCCCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA-SWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDS-SSVEDP 551 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~-~~~~~~ 551 (665)
|.+++.. ...+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++..... ......
T Consensus 118 L~~~l~~-----~~~~~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 191 (360)
T 3eqc_A 118 LDQVLKK-----AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 191 (360)
T ss_dssp HHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----C
T ss_pred HHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCC
Confidence 9999974 24589999999999999999999996 7 99999999999999999999999999864432 223346
Q ss_pred CCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc--------------------------------
Q 005999 552 DTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP-------------------------------- 599 (665)
Q Consensus 552 gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~-------------------------------- 599 (665)
||+.|+|||++. +..++.++|||||||++|||++|+.||........
T Consensus 192 gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (360)
T 3eqc_A 192 GTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMD 270 (360)
T ss_dssp CCCTTCCHHHHT-TCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------------
T ss_pred CCCCeECHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccC
Confidence 899999999987 56789999999999999999999999975321100
Q ss_pred --------cHHHHHHhhccCCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005999 600 --------DMLEWVRTMRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 600 --------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 646 (665)
+....+.............+..+.+|+.+||+.||++|||+.|+++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 271 SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ---CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 01111111111111223356789999999999999999999999873
No 176
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=9.8e-39 Score=328.76 Aligned_cols=241 Identities=19% Similarity=0.305 Sum_probs=201.3
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCc-hhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||++... +++.||+|++..... .....+.+.+|+.++++++||||+++++++.+++..++||||+.++
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 100 (294)
T 2rku_A 21 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 100 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCC
Confidence 67999999999999975 578899999865432 2345677899999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC---CCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS---SVE 549 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~---~~~ 549 (665)
+|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ...
T Consensus 101 ~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 174 (294)
T 2rku_A 101 SLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV 174 (294)
T ss_dssp BHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred CHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEcCCCCEEEEeccCceecccCcccccc
Confidence 99999874 346899999999999999999999999 999999999999999999999999999765432 233
Q ss_pred CCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 550 DPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
..+|+.|+|||++. +..++.++||||||+++|||++|+.||.... ..+....+.. .....+...+..+.+++.+|
T Consensus 175 ~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~ 249 (294)
T 2rku_A 175 LCGTPNYIAPEVLS-KKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--LKETYLRIKK--NEYSIPKHINPVAASLIQKM 249 (294)
T ss_dssp CCSCCSSCCHHHHT-TSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHT--TCCCCCTTSCHHHHHHHHHH
T ss_pred ccCCCCcCCcchhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHhh--ccCCCccccCHHHHHHHHHH
Confidence 45899999999987 5678999999999999999999999997532 1122222221 12223445667899999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 005999 630 SLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 630 l~~dP~~RPt~~evl~~ 646 (665)
|+.||++|||+.|+++.
T Consensus 250 l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 250 LQTDPTARPTINELLND 266 (294)
T ss_dssp TCSSGGGSCCGGGGGGS
T ss_pred cccChhhCcCHHHHhhC
Confidence 99999999999999874
No 177
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.6e-39 Score=338.26 Aligned_cols=240 Identities=20% Similarity=0.294 Sum_probs=195.2
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
.+.||+|+||.||++... +++.||+|++..... ...+|++++.++ +||||+++++++.+++..++||||+.+
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~g 100 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG 100 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCC
Confidence 367999999999999965 688999999976543 134677777777 799999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCC----CceEEeecccccccCCC-
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD----FEARLTDYCLSVLSDSS- 546 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~----~~~kl~Dfgl~~~~~~~- 546 (665)
|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||+.++ +.+||+|||++......
T Consensus 101 g~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~~g-ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (342)
T 2qr7_A 101 GELLDKILR-----QKFFSEREASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174 (342)
T ss_dssp CBHHHHHHT-----CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence 999999974 346899999999999999999999999 9999999999998543 35999999999765432
Q ss_pred --CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCC-ccHHHHHHhhccCC--CchhhhHHH
Q 005999 547 --SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP-PDMLEWVRTMRVDD--GREENRLGM 621 (665)
Q Consensus 547 --~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~ 621 (665)
.....+|+.|+|||++. +..++.++|||||||++|||++|+.||....... .++...+....... ......+..
T Consensus 175 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 253 (342)
T 2qr7_A 175 GLLMTPCYTANFVAPEVLE-RQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDT 253 (342)
T ss_dssp CCBCCSSCCSSCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHH
T ss_pred CceeccCCCccccCHHHhc-CCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHH
Confidence 23346899999999987 4568899999999999999999999997532221 23333333322221 123456788
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHH
Q 005999 622 LTEVASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 622 l~~li~~cl~~dP~~RPt~~evl~~ 646 (665)
+.+++.+||+.||++|||+.|+++.
T Consensus 254 ~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 254 AKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcC
Confidence 9999999999999999999999873
No 178
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=7.6e-39 Score=334.91 Aligned_cols=254 Identities=23% Similarity=0.340 Sum_probs=203.6
Q ss_pred hHhCcccceEEEEEEE------CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVL------DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 468 (665)
+.||+|+||.||+|.. .++..||+|++..... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (327)
T 2yfx_A 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMEL 114 (327)
T ss_dssp EECC--CSSCEEEEEC--------CCEEEEEECCSSCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccc-hhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEec
Confidence 6799999999999983 3567899999975433 34556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCC---CCceEEeeccccccc
Q 005999 469 QPNGSLFNLIHGSRSI--RAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA---DFEARLTDYCLSVLS 543 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~---~~~~kl~Dfgl~~~~ 543 (665)
+++|+|.+++...+.. ....+++..++.++.||+.||+|||+.+ |+||||||+||+++. +..+||+|||++...
T Consensus 115 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~ 193 (327)
T 2yfx_A 115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193 (327)
T ss_dssp CTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred CCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eecCcCCHhHEEEecCCCcceEEECcccccccc
Confidence 9999999999864321 2245899999999999999999999999 999999999999984 456999999998654
Q ss_pred CCCC-----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhh
Q 005999 544 DSSS-----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREEN 617 (665)
Q Consensus 544 ~~~~-----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (665)
.... ....+|+.|+|||++. +..++.++||||||+++|||++ |+.||... ...++...+..... ......
T Consensus 194 ~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~~~~~~~-~~~~~~ 269 (327)
T 2yfx_A 194 YRASYYRKGGCAMLPVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEVLEFVTSGGR-MDPPKN 269 (327)
T ss_dssp HC------CCGGGSCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHTTCC-CCCCTT
T ss_pred ccccccccCCCcCCCcceeCHhHhc-CCCCCchhhHHHHHHHHHHHHcCCCCCCCCc--CHHHHHHHHhcCCC-CCCCCC
Confidence 3221 1224688999999987 5678999999999999999998 99998753 22233333333221 123445
Q ss_pred hHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 618 RLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 618 ~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
.+..+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 270 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 270 CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 6778999999999999999999999999999987654
No 179
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=8.1e-40 Score=340.82 Aligned_cols=252 Identities=20% Similarity=0.320 Sum_probs=197.8
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCCH
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 474 (665)
+.||+|+||.||+|...+ .+|+|+++.........+.+.+|+.++++++||||+++++++.+.+..++||||+++++|
T Consensus 39 ~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L 116 (319)
T 2y4i_B 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL 116 (319)
T ss_dssp CBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEH
T ss_pred eEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcH
Confidence 679999999999998865 389999876544334445678899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCC--------C
Q 005999 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDS--------S 546 (665)
Q Consensus 475 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~--------~ 546 (665)
.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+||+++ ++.+||+|||++..... .
T Consensus 117 ~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~ 190 (319)
T 2y4i_B 117 YSVVRDA----KIVLDVNKTRQIAQEIVKGMGYLHAKG-ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDK 190 (319)
T ss_dssp HHHTTSS----CCCCCSHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSTTEEEC---CCEECCCSCCC----------CCS
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChhhEEEe-CCCEEEeecCCccccccccccccccc
Confidence 9999742 346899999999999999999999999 99999999999998 67999999999765432 1
Q ss_pred CCCCCCCCcccCCccccC--------CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhh
Q 005999 547 SVEDPDTVAYKAPEIRKS--------SRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENR 618 (665)
Q Consensus 547 ~~~~~gt~~y~aPE~~~~--------~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (665)
.....||+.|+|||++.. ...++.++||||||+++|||++|+.||... ........+.............
T Consensus 191 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~ 268 (319)
T 2y4i_B 191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ--PAEAIIWQMGTGMKPNLSQIGM 268 (319)
T ss_dssp CBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC--CHHHHHHHHHTTCCCCCCCSSC
T ss_pred cccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHhccCCCCCCCcCCC
Confidence 122347899999998863 245788999999999999999999999753 1222332232222222222345
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcc
Q 005999 619 LGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMA 656 (665)
Q Consensus 619 ~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 656 (665)
+..+.+++.+||+.||++|||+.|+++.|+.+.+....
T Consensus 269 ~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 269 GKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp CTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 66799999999999999999999999999998776543
No 180
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1e-38 Score=326.90 Aligned_cols=240 Identities=23% Similarity=0.373 Sum_probs=200.4
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|... ++..||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 20 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 99 (284)
T 2vgo_A 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRG 99 (284)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred heecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCC
Confidence 67999999999999965 6788999998654321 123467889999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC-CCCCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS-SVEDP 551 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~-~~~~~ 551 (665)
+|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... .....
T Consensus 100 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 173 (284)
T 2vgo_A 100 ELYKELQKH-----GRFDEQRSATFMEELADALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMC 173 (284)
T ss_dssp EHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCC
T ss_pred cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEEcCCCCEEEecccccccCccccccccc
Confidence 999999742 45899999999999999999999999 999999999999999999999999998665432 23446
Q ss_pred CCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHccc
Q 005999 552 DTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSL 631 (665)
Q Consensus 552 gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 631 (665)
+++.|+|||++. +..++.++||||||+++|||++|+.||.... ..+....+.. .....+...+..+.+++.+|++
T Consensus 174 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~ 248 (284)
T 2vgo_A 174 GTLDYLPPEMIE-GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS--HTETHRRIVN--VDLKFPPFLSDGSKDLISKLLR 248 (284)
T ss_dssp SCGGGCCHHHHT-TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHT--TCCCCCTTSCHHHHHHHHHHSC
T ss_pred CCCCcCCHHHhc-cCCCCcccchhhHHHHHHHHHHCCCCCCCCC--HhHHHHHHhc--cccCCCCcCCHHHHHHHHHHhh
Confidence 899999999987 5678999999999999999999999997531 1122222221 1222344567789999999999
Q ss_pred CCCCCCCCHHHHHH
Q 005999 632 KSPEQRPAMWQVLK 645 (665)
Q Consensus 632 ~dP~~RPt~~evl~ 645 (665)
.||++|||+.|+++
T Consensus 249 ~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 249 YHPPQRLPLKGVME 262 (284)
T ss_dssp SSGGGSCCHHHHHT
T ss_pred cCHhhCCCHHHHhh
Confidence 99999999999987
No 181
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-39 Score=343.86 Aligned_cols=246 Identities=20% Similarity=0.294 Sum_probs=197.8
Q ss_pred HhHhCcccceEEEEEEE----CCeEEEEEEEecCCCc--hhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEE
Q 005999 394 AELLGRGSIGTTYKAVL----DNHLIVTVKRFDANKT--ADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIY 466 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 466 (665)
.+.||+|+||.||++.. .+++.||||+++.... .....+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 36799999999999997 4788999999865432 112334567789999999 7999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC
Q 005999 467 DYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS 546 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 546 (665)
||+++|+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 139 e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 212 (355)
T 1vzo_A 139 DYINGGELFTHLSQ-----RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD 212 (355)
T ss_dssp CCCCSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECCGG
T ss_pred ecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCcEEEeeCCCCeecccC
Confidence 99999999999974 245899999999999999999999999 999999999999999999999999999765332
Q ss_pred C----CCCCCCCcccCCccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhh-ccCCCchhhhHH
Q 005999 547 S----VEDPDTVAYKAPEIRKSS-RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTM-RVDDGREENRLG 620 (665)
Q Consensus 547 ~----~~~~gt~~y~aPE~~~~~-~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 620 (665)
. ....||+.|+|||++.+. ..++.++|||||||++|||++|+.||....... ......... ......+...+.
T Consensus 213 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 291 (355)
T 1vzo_A 213 ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRILKSEPPYPQEMSA 291 (355)
T ss_dssp GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHHHHCCCCCCTTSCH
T ss_pred CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHHhccCCCCCcccCH
Confidence 1 223589999999998742 347899999999999999999999997543222 222222221 122234456677
Q ss_pred HHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 005999 621 MLTEVASVCSLKSPEQRP-----AMWQVLKM 646 (665)
Q Consensus 621 ~l~~li~~cl~~dP~~RP-----t~~evl~~ 646 (665)
.+.+++.+||+.||++|| ++.|+++.
T Consensus 292 ~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 292 LAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp HHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred HHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 899999999999999999 99999874
No 182
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1e-38 Score=330.39 Aligned_cols=241 Identities=17% Similarity=0.282 Sum_probs=198.1
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
.+.||+|+||.||++... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 91 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA--FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGG 91 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCc
Confidence 367999999999999965 788999999975432 33456889999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEe---CCCCceEEeecccccccCCCC-C
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYCLSVLSDSSS-V 548 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill---~~~~~~kl~Dfgl~~~~~~~~-~ 548 (665)
+|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++....... .
T Consensus 92 ~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (304)
T 2jam_A 92 ELFDRILE-----RGVYTEKDASLVIQQVLSAVKYLHENG-IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165 (304)
T ss_dssp BHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTH
T ss_pred cHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccc
Confidence 99999874 245899999999999999999999999 9999999999999 788999999999987654321 1
Q ss_pred CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC--CchhhhHHHHHHHH
Q 005999 549 EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD--GREENRLGMLTEVA 626 (665)
Q Consensus 549 ~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li 626 (665)
...+|+.|+|||++. +..++.++||||||+++|||++|+.||... ...++...+....... ......+..+.+++
T Consensus 166 ~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 242 (304)
T 2jam_A 166 TACGTPGYVAPEVLA-QKPYSKAVDCWSIGVITYILLCGYPPFYEE--TESKLFEKIKEGYYEFESPFWDDISESAKDFI 242 (304)
T ss_dssp HHHSCCCBCCTTTBS-SCSCCHHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHH
T ss_pred cccCCCCccChHHhc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCCCCccccccCCHHHHHHH
Confidence 124799999999987 567899999999999999999999999753 2223333333322211 22345677899999
Q ss_pred HHcccCCCCCCCCHHHHHH
Q 005999 627 SVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 627 ~~cl~~dP~~RPt~~evl~ 645 (665)
.+||+.||++|||+.|+++
T Consensus 243 ~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 243 CHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp HHHHCSSTTTSCCHHHHHT
T ss_pred HHHcCCChhHCcCHHHHhc
Confidence 9999999999999999987
No 183
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.9e-39 Score=331.90 Aligned_cols=251 Identities=24% Similarity=0.340 Sum_probs=195.0
Q ss_pred hHhCcccceEEEEEEEC--C--eEEEEEEEecCCCc-hhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEec
Q 005999 395 ELLGRGSIGTTYKAVLD--N--HLIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQ 469 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 469 (665)
+.||+|+||.||+|.+. + +..||+|+++.... .....+.+.+|++++++++||||+++++++..+. .++|+||+
T Consensus 24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~ 102 (291)
T 1u46_A 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELA 102 (291)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECC
T ss_pred eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecc
Confidence 67999999999999853 2 34689999876532 2345678899999999999999999999998765 88999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC--
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-- 547 (665)
++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 103 ~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 177 (291)
T 1u46_A 103 PLGSLLDRLRKH----QGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177 (291)
T ss_dssp TTCBHHHHHHHH----GGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE
T ss_pred cCCCHHHHHHhc----cCCcCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEEcCCCCEEEccccccccccccccc
Confidence 999999998742 345899999999999999999999999 9999999999999999999999999987664432
Q ss_pred ----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHH
Q 005999 548 ----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGML 622 (665)
Q Consensus 548 ----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 622 (665)
....+|..|+|||++. +..++.++||||||+++|||++ |+.||... ...+....+.............+..+
T Consensus 178 ~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (291)
T 1u46_A 178 YVMQEHRKVPFAWCAPESLK-TRTFSHASDTWMFGVTLWEMFTYGQEPWIGL--NGSQILHKIDKEGERLPRPEDCPQDI 254 (291)
T ss_dssp EEC-----CCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTSCCCCCCCTTCCHHH
T ss_pred hhhhccCCCCceeeCchhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCcccC--CHHHHHHHHHccCCCCCCCcCcCHHH
Confidence 1234678899999987 5668899999999999999999 99999753 22233333332222223345677889
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 623 TEVASVCSLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 623 ~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
.+++.+||+.||++|||+.++++.|+++....
T Consensus 255 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 255 YNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred HHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 99999999999999999999999999886543
No 184
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1e-38 Score=325.35 Aligned_cols=242 Identities=20% Similarity=0.322 Sum_probs=193.8
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|... +++.||+|++...... ....+.+.+|+.++++++||||+++++++.+.+..++||||++++
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 96 (276)
T 2h6d_A 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGG 96 (276)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCC
Confidence 57999999999999976 7889999998654321 233567889999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC--CCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS--VED 550 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~--~~~ 550 (665)
+|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ...
T Consensus 97 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 170 (276)
T 2h6d_A 97 ELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS 170 (276)
T ss_dssp BHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHC-SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------
T ss_pred cHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChhhEEECCCCCEEEeecccccccCCCcceecc
Confidence 999999742 45899999999999999999999999 9999999999999999999999999997765432 233
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHcc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCS 630 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 630 (665)
.+|+.|+|||.+......+.++||||||+++|||++|+.||... ........+..... ..+...+..+.+++.+||
T Consensus 171 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l 246 (276)
T 2h6d_A 171 CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE--HVPTLFKKIRGGVF--YIPEYLNRSVATLLMHML 246 (276)
T ss_dssp ------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHT
T ss_pred cCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC--cHHHHHHHhhcCcc--cCchhcCHHHHHHHHHHc
Confidence 58899999999874434468999999999999999999999752 11233333332211 223455678999999999
Q ss_pred cCCCCCCCCHHHHHHH
Q 005999 631 LKSPEQRPAMWQVLKM 646 (665)
Q Consensus 631 ~~dP~~RPt~~evl~~ 646 (665)
+.||++|||+.|+++.
T Consensus 247 ~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 247 QVDPLKRATIKDIREH 262 (276)
T ss_dssp CSSGGGSCCHHHHHHS
T ss_pred cCChhhCCCHHHHHhC
Confidence 9999999999999874
No 185
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1e-38 Score=335.19 Aligned_cols=241 Identities=19% Similarity=0.305 Sum_probs=201.3
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCc-hhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||++... +++.||+|++..... .....+.+.+|+.++++++||||+++++++.+.+..++||||+.++
T Consensus 47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 126 (335)
T 2owb_A 47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 126 (335)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCC
Confidence 67999999999999965 578899999865432 2345677899999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC---CCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS---SVE 549 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~---~~~ 549 (665)
+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ...
T Consensus 127 ~L~~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 200 (335)
T 2owb_A 127 SLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV 200 (335)
T ss_dssp BHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred CHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CEecCCCchhEEEcCCCCEEEeeccCceecccCcccccc
Confidence 99999874 246899999999999999999999999 999999999999999999999999999765432 233
Q ss_pred CCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHc
Q 005999 550 DPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVC 629 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 629 (665)
..+|+.|+|||++. +..++.++||||||+++|||++|+.||.... ..+....+.. .....+...+..+.+++.+|
T Consensus 201 ~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~ 275 (335)
T 2owb_A 201 LCGTPNYIAPEVLS-KKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--LKETYLRIKK--NEYSIPKHINPVAASLIQKM 275 (335)
T ss_dssp CCSCCSSCCHHHHH-TSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHH--TCCCCCTTSCHHHHHHHHHH
T ss_pred cCCCccccCHHHhc-cCCCCchhhHHHHHHHHHHHHHCcCCCCCCC--HHHHHHHHhc--CCCCCCccCCHHHHHHHHHH
Confidence 45899999999987 5678999999999999999999999997532 1122222222 12223445667799999999
Q ss_pred ccCCCCCCCCHHHHHHH
Q 005999 630 SLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 630 l~~dP~~RPt~~evl~~ 646 (665)
|+.||++|||+.|+++.
T Consensus 276 l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 276 LQTDPTARPTINELLND 292 (335)
T ss_dssp TCSSGGGSCCGGGGGGS
T ss_pred ccCChhHCcCHHHHhcC
Confidence 99999999999999873
No 186
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.2e-38 Score=336.53 Aligned_cols=243 Identities=22% Similarity=0.358 Sum_probs=200.2
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCch------hhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEE
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA------DTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIY 466 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 466 (665)
+.||+|+||.||+|... +|+.||||++...... ....+.+.+|+.+++++ +||||+++++++...+..++||
T Consensus 100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 179 (365)
T 2y7j_A 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVF 179 (365)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEE
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEE
Confidence 67999999999999975 7899999998754321 12245688999999999 8999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC
Q 005999 467 DYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS 546 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 546 (665)
||+++++|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 180 e~~~g~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~g-i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~ 253 (365)
T 2y7j_A 180 DLMRKGELFDYLTE-----KVALSEKETRSIMRSLLEAVSFLHANN-IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG 253 (365)
T ss_dssp CCCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEecCcccccCCC
Confidence 99999999999973 346899999999999999999999999 999999999999999999999999998766543
Q ss_pred C--CCCCCCCcccCCccccC-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC--chhh
Q 005999 547 S--VEDPDTVAYKAPEIRKS-----SRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG--REEN 617 (665)
Q Consensus 547 ~--~~~~gt~~y~aPE~~~~-----~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 617 (665)
. ....||+.|+|||++.. ...++.++|||||||++|||++|+.||... ........+........ ....
T Consensus 254 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~ 331 (365)
T 2y7j_A 254 EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR--RQILMLRMIMEGQYQFSSPEWDD 331 (365)
T ss_dssp CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCHHHHSS
T ss_pred cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHhCCCCCCCccccc
Confidence 2 33468999999998752 235788999999999999999999999752 12233333332222211 1234
Q ss_pred hHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 618 RLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 618 ~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.+..+.+++.+||+.||++|||+.|+++
T Consensus 332 ~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 332 RSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 5677999999999999999999999986
No 187
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=8.9e-39 Score=331.43 Aligned_cols=243 Identities=17% Similarity=0.235 Sum_probs=190.9
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCch---hhHHHHHHHHHHHHhCC---CCCCeeeeeEEEEeCC-----eE
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTA---DTSAEAFEQHMEAVGGL---SHPNLVPIRAYFQAKG-----ER 462 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~-----~~ 462 (665)
+.||+|+||+||+|.. .+++.||+|++...... ......+.+|+++++++ +||||+++++++.... ..
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~ 94 (308)
T 3g33_A 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKV 94 (308)
T ss_dssp EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEE
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeE
Confidence 6799999999999995 57889999998643311 11223455666666655 5999999999998755 57
Q ss_pred EEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccc
Q 005999 463 LVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVL 542 (665)
Q Consensus 463 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~ 542 (665)
++||||+. |+|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 95 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 169 (308)
T 3g33_A 95 TLVFEHVD-QDLRTYLDKA---PPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLARI 169 (308)
T ss_dssp EEEEECCC-CBHHHHHHTC---CTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCTTTEEECTTSCEEECSCSCTTT
T ss_pred EEEehhhh-cCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEEeeCccccc
Confidence 89999997 5999999753 2344899999999999999999999999 99999999999999999999999999976
Q ss_pred cCCCC--CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHH-HhhccCCC------
Q 005999 543 SDSSS--VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWV-RTMRVDDG------ 613 (665)
Q Consensus 543 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~-~~~~~~~~------ 613 (665)
..... ....+|+.|+|||++. +..++.++|||||||++|||++|+.||.... ..+....+ ........
T Consensus 170 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~ 246 (308)
T 3g33_A 170 YSYQMALTPVVVTLWYRAPEVLL-QSTYATPVDMWSVGCIFAEMFRRKPLFCGNS--EADQLGKIFDLIGLPPEDDWPRD 246 (308)
T ss_dssp STTCCCSGGGGCCCSSCCHHHHH-TSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSCSS
T ss_pred cCCCcccCCccccccccCchHHc-CCCCCchHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCChhhccch
Confidence 65432 2235899999999987 5678999999999999999999999997532 12222222 21111100
Q ss_pred ------------------chhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 614 ------------------REENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 614 ------------------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.....+..+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 01235577899999999999999999999986
No 188
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1e-38 Score=349.24 Aligned_cols=241 Identities=17% Similarity=0.222 Sum_probs=189.3
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeC------CeEEEEEE
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAK------GERLVIYD 467 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~e 467 (665)
+.||+|+||+||+|... +++.||||++..........+.+.+|+.+++.++||||+++++++... ...++|||
T Consensus 68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E 147 (464)
T 3ttj_A 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147 (464)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEE
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEe
Confidence 67999999999999854 688999999976654455677889999999999999999999999654 46799999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC
Q 005999 468 YQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 547 (665)
|+.+ +|.+.+.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 148 ~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 218 (464)
T 3ttj_A 148 LMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 218 (464)
T ss_dssp CCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCCC-----CC
T ss_pred CCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc
Confidence 9986 57777642 3889999999999999999999999 9999999999999999999999999997765432
Q ss_pred --CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC-------------
Q 005999 548 --VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD------------- 612 (665)
Q Consensus 548 --~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~------------- 612 (665)
....||+.|+|||++. +..++.++||||+||++|||++|+.||..... ...+...+.......
T Consensus 219 ~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~-~~~~~~i~~~lg~p~~~~~~~~~~~~~~ 296 (464)
T 3ttj_A 219 MMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNKVIEQLGTPCPEFMKKLQPTVRN 296 (464)
T ss_dssp CC----CCCTTCCHHHHT-TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHTTSCHHHHH
T ss_pred ccCCCcccccccCHHHHc-CCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHHcchhhhh
Confidence 3346899999999997 56899999999999999999999999975321 011111111111000
Q ss_pred -----------C---------------chhhhHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005999 613 -----------G---------------REENRLGMLTEVASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 613 -----------~---------------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 646 (665)
. .....+..+.+|+.+||+.||++|||+.|+++.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 001125678999999999999999999999873
No 189
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.9e-39 Score=341.41 Aligned_cols=242 Identities=20% Similarity=0.264 Sum_probs=180.1
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeC------CeEEEEEE
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAK------GERLVIYD 467 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~e 467 (665)
+.||+|+||.||+|.. .+++.||||++..........+.+.+|+++++.++||||+++++++... ...++|+|
T Consensus 35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e 114 (367)
T 2fst_X 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 114 (367)
T ss_dssp EECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEec
Confidence 5799999999999985 5788999999976554445667888999999999999999999999654 56799999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC
Q 005999 468 YQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 547 (665)
|+ +++|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 115 ~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 186 (367)
T 2fst_X 115 LM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTADEM 186 (367)
T ss_dssp CC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC-----------
T ss_pred cc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHhhEEECCCCCEEEeeccccccccccC
Confidence 98 6799988863 45899999999999999999999999 9999999999999999999999999998776555
Q ss_pred CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhh-ccC---------------
Q 005999 548 VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTM-RVD--------------- 611 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~-~~~--------------- 611 (665)
....+|+.|+|||++.+...++.++||||+||++|||++|+.||.... ..+....+... ...
T Consensus 187 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~ 264 (367)
T 2fst_X 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGAELLKKISSESARN 264 (367)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCHHHHTTCCCHHHHH
T ss_pred CCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHHHHhhhHHHHH
Confidence 556789999999998755678999999999999999999999997632 11111111111 100
Q ss_pred --------CC-----chhhhHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005999 612 --------DG-----REENRLGMLTEVASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 612 --------~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 646 (665)
.. .....+..+.+|+.+||+.||++|||+.|+++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 265 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00 011235678999999999999999999999873
No 190
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=7.7e-39 Score=336.04 Aligned_cols=251 Identities=25% Similarity=0.361 Sum_probs=190.5
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEe-----CCeEEEEEEec
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA-----KGERLVIYDYQ 469 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~~~lv~e~~ 469 (665)
+.||+|+||.||+|.. +++.||||++..... .....+.|+..+..++||||+++++++.. ....++||||+
T Consensus 19 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~ 94 (336)
T 3g2f_A 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYY 94 (336)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCC
T ss_pred eecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecC
Confidence 6799999999999977 567899999864431 12222344445566899999999986543 23678999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---------CCeeccCCCCCceEeCCCCceEEeecccc
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA---------SWLIHGNLKSSNVLLGADFEARLTDYCLS 540 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~---------~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~ 540 (665)
++|+|.+++... ..++..++.++.||+.||+|||+. + |+||||||+|||++.++.+||+|||++
T Consensus 95 ~~g~L~~~l~~~------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kL~DFG~a 167 (336)
T 3g2f_A 95 PNGSLXKYLSLH------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA-ISHRDLNSRNVLVKNDGTCVISDFGLS 167 (336)
T ss_dssp TTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC-EECSSCSGGGEEECTTSCEEECCCTTC
T ss_pred CCCcHHHHHhhc------ccchhHHHHHHHHHHHHHHHHHhhhccccccccc-eeecccccceEEEcCCCcEEEeeccce
Confidence 999999999742 348899999999999999999998 8 999999999999999999999999999
Q ss_pred cccCCCC-----------CCCCCCCcccCCccccCC------CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc----
Q 005999 541 VLSDSSS-----------VEDPDTVAYKAPEIRKSS------RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP---- 599 (665)
Q Consensus 541 ~~~~~~~-----------~~~~gt~~y~aPE~~~~~------~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~---- 599 (665)
....... ....||+.|+|||++.+. ..++.++|||||||++|||++|..||........
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~ 247 (336)
T 3g2f_A 168 MRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMA 247 (336)
T ss_dssp EECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCT
T ss_pred eecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHh
Confidence 7654321 123589999999998732 3456789999999999999999877643221110
Q ss_pred ---------cHHHH---HHhhccCCC------chhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcc
Q 005999 600 ---------DMLEW---VRTMRVDDG------REENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMA 656 (665)
Q Consensus 600 ---------~~~~~---~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 656 (665)
....+ +........ .....+..+.+++.+||+.||++|||+.|+++.|+++......
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~ 322 (336)
T 3g2f_A 248 FQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER 322 (336)
T ss_dssp THHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred hhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence 11111 111111111 1223566799999999999999999999999999999876653
No 191
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=336.74 Aligned_cols=242 Identities=17% Similarity=0.275 Sum_probs=190.3
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|... +++.||+|++...... .....+.+|++++++++||||+++++++.+++..++||||+.+ +
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 85 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-D 85 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCSE-E
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccccc-C
Confidence 57999999999999975 7889999998654321 1122345799999999999999999999999999999999984 9
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC---CCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS---VED 550 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~---~~~ 550 (665)
|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ...
T Consensus 86 l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 160 (324)
T 3mtl_A 86 LKQYLDDC----GNIINMHNVKLFLFQLLRGLAYCHRQK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNE 160 (324)
T ss_dssp HHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCCGGGEEECTTCCEEECSSSEEECC----------
T ss_pred HHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccc
Confidence 99988753 346899999999999999999999999 9999999999999999999999999987654322 233
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhcc-CCC----------------
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRV-DDG---------------- 613 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~-~~~---------------- 613 (665)
.+|+.|+|||++.+...++.++|||||||++|||++|+.||.... ..+....+..... ...
T Consensus 161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (324)
T 3mtl_A 161 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST--VEEQLHFIFRILGTPTEETWPGILSNEEFKTYN 238 (324)
T ss_dssp --CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTC
T ss_pred cCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCChHhchhhhcchhhcccc
Confidence 579999999998755678999999999999999999999997632 1222222222111 100
Q ss_pred -----------chhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 614 -----------REENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 614 -----------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.....+..+.+|+.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 239 YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 01234567899999999999999999999987
No 192
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=9.2e-39 Score=345.64 Aligned_cols=244 Identities=22% Similarity=0.321 Sum_probs=190.8
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCch------hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEE
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA------DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIY 466 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 466 (665)
.+.||+|+||.||+|... +++.||+|++...... ......+.+|++++++++||||+++++++.. +..++||
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~lv~ 218 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVL 218 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SEEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-CceEEEE
Confidence 467999999999999864 6789999998654321 1122357899999999999999999999854 5589999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCC---CceEEeeccccccc
Q 005999 467 DYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD---FEARLTDYCLSVLS 543 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~---~~~kl~Dfgl~~~~ 543 (665)
||+++|+|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.+ +.+||+|||++...
T Consensus 219 e~~~~g~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~ 292 (419)
T 3i6u_A 219 ELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 292 (419)
T ss_dssp ECCTTCBGGGGTSS-----SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSSSCCEEECCSSTTTSC
T ss_pred EcCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCCCcceEEEeecccceec
Confidence 99999999998863 356899999999999999999999999 9999999999999754 45999999999876
Q ss_pred CCCC--CCCCCCCcccCCccccC--CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC--chhh
Q 005999 544 DSSS--VEDPDTVAYKAPEIRKS--SRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG--REEN 617 (665)
Q Consensus 544 ~~~~--~~~~gt~~y~aPE~~~~--~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 617 (665)
.... ....||+.|+|||++.. ...++.++|||||||++|||++|+.||.... ....+...+........ ....
T Consensus 293 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~-~~~~~~~~i~~~~~~~~~~~~~~ 371 (419)
T 3i6u_A 293 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR-TQVSLKDQITSGKYNFIPEVWAE 371 (419)
T ss_dssp C-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCS-SSCCHHHHHHTTCCCCCHHHHTT
T ss_pred CCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCc-chHHHHHHHhcCCCCCCchhhcc
Confidence 5433 23458999999999752 3567889999999999999999999997632 22244444443322221 1234
Q ss_pred hHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 618 RLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 618 ~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.+..+.+++.+||+.||++|||+.|+++
T Consensus 372 ~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 372 VSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 5678999999999999999999999987
No 193
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=4.4e-38 Score=344.59 Aligned_cols=251 Identities=15% Similarity=0.204 Sum_probs=202.6
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCC-CCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSH-PNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|.. .+++.||||++...... +.+.+|+++++.++| +++..+..++...+..++||||+ ++
T Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~ 87 (483)
T 3sv0_A 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GP 87 (483)
T ss_dssp CCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred EEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CC
Confidence 5799999999999996 57889999987654432 246789999999977 55666777777888999999999 99
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEe---CCCCceEEeecccccccCCCCC-
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYCLSVLSDSSSV- 548 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill---~~~~~~kl~Dfgl~~~~~~~~~- 548 (665)
+|.+++... ...+++..++.|+.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++........
T Consensus 88 sL~~ll~~~----~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 88 SLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp BHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred CHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 999999742 346999999999999999999999999 9999999999999 5889999999999976544321
Q ss_pred ---------CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc-cHHHHHHhhccCC---Cch
Q 005999 549 ---------EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP-DMLEWVRTMRVDD---GRE 615 (665)
Q Consensus 549 ---------~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~-~~~~~~~~~~~~~---~~~ 615 (665)
...||+.|+|||++. +..++.++|||||||++|||++|+.||........ +....+....... ...
T Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 241 (483)
T 3sv0_A 163 QHIPYRENKNLTGTARYASVNTHL-GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALC 241 (483)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHH
T ss_pred cccccccccccCCCccccCHHHhc-CCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHh
Confidence 345899999999987 66789999999999999999999999987433222 2222222111111 122
Q ss_pred hhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhcc
Q 005999 616 ENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVMA 656 (665)
Q Consensus 616 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 656 (665)
..++..+.+++..||+.||++||++.+|++.|+++......
T Consensus 242 ~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~ 282 (483)
T 3sv0_A 242 RGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGF 282 (483)
T ss_dssp TTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred cCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCC
Confidence 45567899999999999999999999999999999876543
No 194
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.3e-39 Score=354.58 Aligned_cols=242 Identities=24% Similarity=0.363 Sum_probs=203.2
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
.+.||+|+||.||+|... +++.||||++...... ....+.+.+|++++++++||||+++++++.+.+..++||||+.+
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 110 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 467999999999999975 7889999998654322 24467789999999999999999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEe---CCCCceEEeecccccccCCCC-
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL---GADFEARLTDYCLSVLSDSSS- 547 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill---~~~~~~kl~Dfgl~~~~~~~~- 547 (665)
|+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++.......
T Consensus 111 ~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 184 (484)
T 3nyv_A 111 GELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 184 (484)
T ss_dssp CBHHHHHHT-----CSCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCS
T ss_pred CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccc
Confidence 999999873 356899999999999999999999999 9999999999999 567899999999997665432
Q ss_pred -CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC--CchhhhHHHHHH
Q 005999 548 -VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD--GREENRLGMLTE 624 (665)
Q Consensus 548 -~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 624 (665)
....||+.|+|||++. + .++.++||||+||++|+|++|+.||... ...++...+....... ......+..+.+
T Consensus 185 ~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 260 (484)
T 3nyv_A 185 MKDKIGTAYYIAPEVLH-G-TYDEKCDVWSTGVILYILLSGCPPFNGA--NEYDILKKVEKGKYTFELPQWKKVSESAKD 260 (484)
T ss_dssp HHHHTTGGGTCCHHHHH-T-CCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCSGGGGGSCHHHHH
T ss_pred cccCCCCccccCceeec-C-CCCCcceeHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHcCCCCCCCcccccCCHHHHH
Confidence 2235899999999986 3 6899999999999999999999999763 2224444444332222 223456788999
Q ss_pred HHHHcccCCCCCCCCHHHHHH
Q 005999 625 VASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 625 li~~cl~~dP~~RPt~~evl~ 645 (665)
++.+||+.||++|||+.|+++
T Consensus 261 li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 261 LIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp HHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHCCCChhHCcCHHHHhh
Confidence 999999999999999999987
No 195
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=327.09 Aligned_cols=245 Identities=21% Similarity=0.318 Sum_probs=197.7
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
.+||+|+||.||+|.. .++..||+|.+..... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+++++
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 105 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS--RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGS 105 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC-----HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEE
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCch--HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCC
Confidence 4699999999999996 4688999999876542 445678999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCC-CCceEEeecccccccCCC---CCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA-DFEARLTDYCLSVLSDSS---SVE 549 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~-~~~~kl~Dfgl~~~~~~~---~~~ 549 (665)
|.+++.... ....+++..+..++.||+.||+|||+.+ |+||||||+||+++. ++.+||+|||++...... ...
T Consensus 106 L~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 182 (295)
T 2clq_A 106 LSALLRSKW--GPLKDNEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182 (295)
T ss_dssp HHHHHHHTT--CCCTTCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CC
T ss_pred HHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhCC-EEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccc
Confidence 999997532 2345678899999999999999999999 999999999999987 899999999999765432 233
Q ss_pred CCCCCcccCCccccCC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHH
Q 005999 550 DPDTVAYKAPEIRKSS-RRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASV 628 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~-~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 628 (665)
..+|+.|+|||++... ..++.++||||||+++|||++|+.||........... ...........+...+..+.+++.+
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~ 261 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF-KVGMFKVHPEIPESMSAEAKAFILK 261 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH-HHHHHCCCCCCCTTSCHHHHHHHHH
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH-hhccccccccccccCCHHHHHHHHH
Confidence 4689999999998632 2378999999999999999999999965321111111 1111122223445667789999999
Q ss_pred cccCCCCCCCCHHHHHH
Q 005999 629 CSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 629 cl~~dP~~RPt~~evl~ 645 (665)
||+.||++|||+.|+++
T Consensus 262 ~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 262 CFEPDPDKRACANDLLV 278 (295)
T ss_dssp TTCSSTTTSCCHHHHHT
T ss_pred HccCChhhCCCHHHHhc
Confidence 99999999999999985
No 196
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.8e-38 Score=351.97 Aligned_cols=241 Identities=21% Similarity=0.321 Sum_probs=197.8
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchh-----------hHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeE
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTAD-----------TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGER 462 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 462 (665)
+.||+|+||+||+|... ++..||+|++....... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 42 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 121 (504)
T 3q5i_A 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYF 121 (504)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 67999999999999965 67899999987543221 2356789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCC---ceEEeeccc
Q 005999 463 LVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADF---EARLTDYCL 539 (665)
Q Consensus 463 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~---~~kl~Dfgl 539 (665)
++||||+++|+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||+
T Consensus 122 ~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 195 (504)
T 3q5i_A 122 YLVTEFYEGGELFEQIIN-----RHKFDECDAANIMKQILSGICYLHKHN-IVHRDIKPENILLENKNSLLNIKIVDFGL 195 (504)
T ss_dssp EEEEECCTTCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESSTTCCSSEEECCCTT
T ss_pred EEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCcHHHEEEecCCCCccEEEEECCC
Confidence 999999999999999874 345899999999999999999999999 99999999999999775 699999999
Q ss_pred ccccCCC--CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC--ch
Q 005999 540 SVLSDSS--SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG--RE 615 (665)
Q Consensus 540 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~--~~ 615 (665)
+...... .....||+.|+|||++. ..++.++||||+||++|+|++|+.||... ...++...+........ ..
T Consensus 196 a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~ 271 (504)
T 3q5i_A 196 SSFFSKDYKLRDRLGTAYYIAPEVLK--KKYNEKCDVWSCGVIMYILLCGYPPFGGQ--NDQDIIKKVEKGKYYFDFNDW 271 (504)
T ss_dssp CEECCTTSCBCCCCSCTTTCCHHHHT--TCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCHHHH
T ss_pred CEEcCCCCccccccCCcCCCCHHHhc--cCCCchHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCCCCcccc
Confidence 9776543 23446899999999986 46899999999999999999999999763 22234444433322221 12
Q ss_pred hhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 616 ENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 616 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
...+..+.+++.+||+.||++|||+.|+++
T Consensus 272 ~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 272 KNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 355678999999999999999999999986
No 197
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.1e-38 Score=327.70 Aligned_cols=241 Identities=25% Similarity=0.405 Sum_probs=202.3
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|... +++.||+|++..... ....+.+.+|+.++++++||||+++++++.+++..++||||+++++
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 106 (303)
T 3a7i_A 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS 106 (303)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred hhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCc
Confidence 57999999999999864 688999999976543 2346778999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC---CCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS---VED 550 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~---~~~ 550 (665)
|.+++.. ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ...
T Consensus 107 L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 179 (303)
T 3a7i_A 107 ALDLLEP------GPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF 179 (303)
T ss_dssp HHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCC
T ss_pred HHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChheEEECCCCCEEEeecccceecCccccccCcc
Confidence 9999863 45899999999999999999999999 9999999999999999999999999997654432 234
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHcc
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCS 630 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 630 (665)
.+|+.|+|||++. +..++.++||||||+++|||++|+.||.... .......+.... ........+..+.+++.+||
T Consensus 180 ~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l 255 (303)
T 3a7i_A 180 VGTPFWMAPEVIK-QSAYDSKADIWSLGITAIELARGEPPHSELH--PMKVLFLIPKNN-PPTLEGNYSKPLKEFVEACL 255 (303)
T ss_dssp CSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSC-CCCCCSSCCHHHHHHHHHHC
T ss_pred CCCcCccCHHHHh-cCCCCchhhhHHHHHHHHHHccCCCCCCCcC--HHHHHHHhhcCC-CCCCccccCHHHHHHHHHHc
Confidence 6899999999987 5678999999999999999999999987531 222222222221 12234456778999999999
Q ss_pred cCCCCCCCCHHHHHHHH
Q 005999 631 LKSPEQRPAMWQVLKMI 647 (665)
Q Consensus 631 ~~dP~~RPt~~evl~~L 647 (665)
+.||++|||+.|+++..
T Consensus 256 ~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 256 NKEPSFRPTAKELLKHK 272 (303)
T ss_dssp CSSGGGSCCHHHHTTCH
T ss_pred CCChhhCcCHHHHhhCh
Confidence 99999999999998753
No 198
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.5e-38 Score=326.36 Aligned_cols=245 Identities=19% Similarity=0.284 Sum_probs=194.8
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++..++..++||||+. ++
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~ 87 (299)
T 2r3i_A 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QD 87 (299)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EE
T ss_pred hhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-CC
Confidence 57999999999999975 68899999997654433445678899999999999999999999999999999999998 59
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC---CCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS---VED 550 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~---~~~ 550 (665)
|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ...
T Consensus 88 L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 163 (299)
T 2r3i_A 88 LKKFMDAS---ALTGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 163 (299)
T ss_dssp HHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTSC
T ss_pred HHHHHHhh---hccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccccCcc
Confidence 99998753 2345889999999999999999999999 9999999999999999999999999987654322 233
Q ss_pred CCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC-----------------
Q 005999 551 PDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG----------------- 613 (665)
Q Consensus 551 ~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~----------------- 613 (665)
.+|+.|+|||.+.+...++.++||||||+++|||++|+.||..... ...+....+.......
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (299)
T 2r3i_A 164 VVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242 (299)
T ss_dssp BCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSC
T ss_pred cccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHHHhCCCchhhhhHhhcCcccchhhh
Confidence 5799999999987555589999999999999999999999976321 1122222221111100
Q ss_pred ---------chhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 614 ---------REENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 614 ---------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.....+..+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 01234577899999999999999999999987
No 199
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=4.1e-39 Score=328.79 Aligned_cols=249 Identities=20% Similarity=0.263 Sum_probs=202.1
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEe--CCeEEEEEEecCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA--KGERLVIYDYQPN 471 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~~ 471 (665)
+.||+|+||.||++... +++.||+|++..........+.+.+|++++++++||||+++++++.+ .+..++||||+++
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~ 91 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEG 91 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTT
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCC
Confidence 57999999999999975 68899999998765555567789999999999999999999998854 5689999999999
Q ss_pred CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC----eeccCCCCCceEeCCCCceEEeecccccccCCCC
Q 005999 472 GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASW----LIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 472 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~----iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 547 (665)
|+|.+++..... ....+++..++.++.|++.||+|||+.+. |+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~ 170 (279)
T 2w5a_A 92 GDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT 170 (279)
T ss_dssp EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---C
T ss_pred CCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccc
Confidence 999999974321 23458999999999999999999999763 9999999999999999999999999987654432
Q ss_pred C---CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHH
Q 005999 548 V---EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTE 624 (665)
Q Consensus 548 ~---~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 624 (665)
. ...+|+.|+|||.+. +..++.++||||||+++|||++|+.||... ...++...+...... ..+...+..+.+
T Consensus 171 ~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~i~~~~~~-~~~~~~~~~l~~ 246 (279)
T 2w5a_A 171 SFAKTFVGTPYYMSPEQMN-RMSYNEKSDIWSLGCLLYELCALMPPFTAF--SQKELAGKIREGKFR-RIPYRYSDELNE 246 (279)
T ss_dssp HHHHHHHSCCTTCCHHHHH-CC-CCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCC-CCCTTSCHHHHH
T ss_pred ccccccCCCccccChHHhc-cCCCCchhhHHHHHHHHHHHHHCCCCCccc--CHHHHHHHHhhcccc-cCCcccCHHHHH
Confidence 1 124789999999987 567899999999999999999999999763 222333333332221 234456778999
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHH
Q 005999 625 VASVCSLKSPEQRPAMWQVLKMIQ 648 (665)
Q Consensus 625 li~~cl~~dP~~RPt~~evl~~L~ 648 (665)
++.+||+.||++|||+.|+++.+.
T Consensus 247 li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 247 IITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp HHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred HHHHHcCCCcccCCCHHHHHhChh
Confidence 999999999999999999998653
No 200
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.2e-40 Score=342.24 Aligned_cols=247 Identities=22% Similarity=0.358 Sum_probs=181.4
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhC--CCCCCeeeeeEEEEeCC----eEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGG--LSHPNLVPIRAYFQAKG----ERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~lv~e~ 468 (665)
+.||+|+||.||+|... ++.||||++.... ...+.+|.+++.. ++||||+++++++.... ..++||||
T Consensus 9 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~ 82 (303)
T 3gxj_A 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp EEEEECSSSEEEEC-CT-TSCEEEEECC-TT-----HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred hhccCCCCeEEEEEEEc-CcceEEEEecccc-----hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEec
Confidence 67999999999999865 7789999986432 3456677778777 79999999999998876 78999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCeeccCCCCCceEeCCCCceEEeecccc
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH--------RASWLIHGNLKSSNVLLGADFEARLTDYCLS 540 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH--------~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~ 540 (665)
+++|+|.++++. ..+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||++
T Consensus 83 ~~~g~L~~~l~~------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 83 HEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp CTTCCHHHHHHH------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC--CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred cCCCCHHHHHhc------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC-EeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 999999999974 24777889999999999999999 888 999999999999999999999999998
Q ss_pred cccCCCC-------CCCCCCCcccCCccccCCC-----CCCCcchHHHHHHHHHHHHhC----------CCCCCCCCCCC
Q 005999 541 VLSDSSS-------VEDPDTVAYKAPEIRKSSR-----RATSKSDVYAFGVLLLELLTG----------KHPSQHPYLAP 598 (665)
Q Consensus 541 ~~~~~~~-------~~~~gt~~y~aPE~~~~~~-----~~~~k~DvwSlGvvl~elltg----------~~P~~~~~~~~ 598 (665)
....... ....||+.|+|||++.... .++.++|||||||++|||++| +.||.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 6554322 1225899999999987332 233689999999999999999 66765432222
Q ss_pred ---ccHHHHHHhhccCCCc-----hhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 599 ---PDMLEWVRTMRVDDGR-----EENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 599 ---~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
..+...+......... ....+..+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred ccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 1222222221111111 2255668999999999999999999999999999887654
No 201
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2e-38 Score=337.61 Aligned_cols=241 Identities=19% Similarity=0.245 Sum_probs=194.3
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeE------EEEEE
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGER------LVIYD 467 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~------~lv~e 467 (665)
+.||+|+||.||+|... +++.||+|++..........+.+.+|+.++++++||||+++++++...+.. ++|||
T Consensus 48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e 127 (371)
T 4exu_A 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP 127 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEE
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEc
Confidence 57999999999999864 689999999987655556677889999999999999999999999877654 99999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC
Q 005999 468 YQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 547 (665)
|+. ++|.+++. ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 128 ~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~ 198 (371)
T 4exu_A 128 FMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADAEM 198 (371)
T ss_dssp CCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSTTCC-------
T ss_pred ccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCcCHHHeEECCCCCEEEEecCcccccccCc
Confidence 997 58988874 24899999999999999999999999 9999999999999999999999999998776666
Q ss_pred CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHH-HHHHhhccC---------------
Q 005999 548 VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDML-EWVRTMRVD--------------- 611 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~-~~~~~~~~~--------------- 611 (665)
....+|+.|+|||++.....++.++|||||||++|||++|+.||.... ..+.. .........
T Consensus 199 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 276 (371)
T 4exu_A 199 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD--YLDQLTQILKVTGVPGTEFVQKLNDKAAKS 276 (371)
T ss_dssp -CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCHHHHTTCSCHHHHH
T ss_pred CCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCcHHHHHHhhhhhhhh
Confidence 666789999999998755779999999999999999999999997532 11111 111111000
Q ss_pred --------CC-----chhhhHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005999 612 --------DG-----REENRLGMLTEVASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 612 --------~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 646 (665)
.. .....+..+.+|+.+||+.||++|||+.|+++.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 277 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00 112346789999999999999999999999873
No 202
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-38 Score=335.55 Aligned_cols=246 Identities=24% Similarity=0.281 Sum_probs=194.4
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchh---hHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEec
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTAD---TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQ 469 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 469 (665)
.+.||+|+||.||+|... +++.||+|++....... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 94 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcC
Confidence 367999999999999964 68899999997543221 12346789999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC--
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-- 547 (665)
.+ +|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~-~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 168 (346)
T 1ua2_A 95 ET-DLEVIIKD----NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 168 (346)
T ss_dssp SE-EHHHHHTT----CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred CC-CHHHHHHh----cCcCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCCHHHEEEcCCCCEEEEecccceeccCCccc
Confidence 86 89998874 2346888999999999999999999999 9999999999999999999999999997654322
Q ss_pred -CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC-------------
Q 005999 548 -VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG------------- 613 (665)
Q Consensus 548 -~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~------------- 613 (665)
....+|+.|+|||++.+...++.++|||||||++|||++|.+||.... ....+............
T Consensus 169 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 247 (346)
T 1ua2_A 169 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS-DLDQLTRIFETLGTPTEEQWPDMCSLPDYV 247 (346)
T ss_dssp CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCCCCTTTSSSTTSSTTCC
T ss_pred CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC-HHHHHHHHHHHcCCCChhhhhhhccCcccc
Confidence 234689999999998755568999999999999999999999987531 11122222222111100
Q ss_pred ------------chhhhHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005999 614 ------------REENRLGMLTEVASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 614 ------------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 646 (665)
.....+..+.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 248 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp CCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 012345789999999999999999999999874
No 203
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=5.1e-39 Score=338.10 Aligned_cols=246 Identities=21% Similarity=0.267 Sum_probs=195.5
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHH-HhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEA-VGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|.. .+++.||||++........ ...+..|+.+ ++.++||||+++++++.+++..++||||+.+
T Consensus 57 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 134 (340)
T 3an0_A 57 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE-QKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 134 (340)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHH-HHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-
T ss_pred eEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHH-HHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-
Confidence 5699999999999996 5789999999976654333 3444455554 7888999999999999999999999999986
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCCceEeCCCCceEEeecccccccCCCC--CC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA-SWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS--VE 549 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~--~~ 549 (665)
+|.+++..... ....+++..++.++.||+.||+|||++ + |+||||||+||+++.++.+||+|||++....... ..
T Consensus 135 ~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 212 (340)
T 3an0_A 135 SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTI 212 (340)
T ss_dssp EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHHHH
T ss_pred cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeeCCCceeccccccccc
Confidence 99888763211 245799999999999999999999986 8 9999999999999999999999999987654321 12
Q ss_pred CCCCCcccCCccccC---CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHH
Q 005999 550 DPDTVAYKAPEIRKS---SRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVA 626 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~---~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 626 (665)
..||+.|+|||++.. ...++.++|||||||++|||++|+.||.........+...+... .........+..+.+++
T Consensus 213 ~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li 291 (340)
T 3an0_A 213 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP-SPQLPADKFSAEFVDFT 291 (340)
T ss_dssp SSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSC-CCCCCGGGSCHHHHHHH
T ss_pred CCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCC-CCCCCcccCCHHHHHHH
Confidence 368999999999642 34688999999999999999999999975322112222222211 11122345677899999
Q ss_pred HHcccCCCCCCCCHHHHHH
Q 005999 627 SVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 627 ~~cl~~dP~~RPt~~evl~ 645 (665)
.+||+.||++|||+.|+++
T Consensus 292 ~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 292 SQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HHHTCSSGGGSCCHHHHTT
T ss_pred HHHccCCcccCcCHHHHhc
Confidence 9999999999999999987
No 204
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.7e-38 Score=342.87 Aligned_cols=242 Identities=20% Similarity=0.263 Sum_probs=195.2
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC------CCCCeeeeeEEEEeCCeEEEEE
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL------SHPNLVPIRAYFQAKGERLVIY 466 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~~~~lv~ 466 (665)
.+.||+|+||.||+|... +++.||||++.... ...+.+.+|+++++.+ +|+||+++++++...+..++||
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 178 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK---RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTF 178 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEE
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCcc---chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEE
Confidence 367999999999999865 58899999997543 3345566777777665 6779999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCc--eEEeecccccccC
Q 005999 467 DYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFE--ARLTDYCLSVLSD 544 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~--~kl~Dfgl~~~~~ 544 (665)
||+. ++|.+++... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||++....
T Consensus 179 e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 179 ELLS-MNLYELIKKN---KFQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp CCCC-CBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHHHT-EECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred eccC-CCHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 9996 5999998753 2345899999999999999999999999 999999999999999887 9999999998777
Q ss_pred CCCCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC-----------
Q 005999 545 SSSVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG----------- 613 (665)
Q Consensus 545 ~~~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~----------- 613 (665)
.......+|+.|+|||++. +..++.++|||||||++|||++|++||..... ...+...+........
T Consensus 254 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltG~~pf~~~~~-~~~l~~i~~~~~~p~~~~~~~~~~~~~ 331 (429)
T 3kvw_A 254 QRVYTYIQSRFYRAPEVIL-GARYGMPIDMWSLGCILAELLTGYPLLPGEDE-GDQLACMIELLGMPSQKLLDASKRAKN 331 (429)
T ss_dssp CCCCSSCSCGGGCCHHHHH-TBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHTBTTHHH
T ss_pred CcccccCCCCCccChHHHh-CCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCCHHHHHhhhhhhh
Confidence 6666668999999999987 56799999999999999999999999976321 1111111111110000
Q ss_pred ---------------------------------------------chhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 614 ---------------------------------------------REENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 614 ---------------------------------------------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.....+..+.+|+.+||+.||++|||+.|+++
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~ 408 (429)
T 3kvw_A 332 FVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR 408 (429)
T ss_dssp HBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence 00112466899999999999999999999987
No 205
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=333.91 Aligned_cols=251 Identities=23% Similarity=0.305 Sum_probs=185.7
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCC-CCCeeeeeEEEE--------eCCeEE
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS-HPNLVPIRAYFQ--------AKGERL 463 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~--------~~~~~~ 463 (665)
.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++.++. ||||+++++++. .....+
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~ 110 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE--EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFL 110 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCc--hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEE
Confidence 367999999999999964 78899999985543 345567889999999995 999999999984 334578
Q ss_pred EEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CeeccCCCCCceEeCCCCceEEeecccccc
Q 005999 464 VIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS-WLIHGNLKSSNVLLGADFEARLTDYCLSVL 542 (665)
Q Consensus 464 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~-~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~ 542 (665)
+|+||+. |+|.+++.... ....+++..++.++.||+.||+|||+.+ +|+||||||+|||++.++.+||+|||++..
T Consensus 111 lv~e~~~-g~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 187 (337)
T 3ll6_A 111 LLTELCK-GQLVEFLKKME--SRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187 (337)
T ss_dssp EEEECCS-EEHHHHHHHHH--TTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBC
T ss_pred EEEEecC-CCHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcccee
Confidence 9999996 69999886422 2346999999999999999999999875 499999999999999999999999999976
Q ss_pred cCCCCC---------------CCCCCCcccCCcccc--CCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHH
Q 005999 543 SDSSSV---------------EDPDTVAYKAPEIRK--SSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWV 605 (665)
Q Consensus 543 ~~~~~~---------------~~~gt~~y~aPE~~~--~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~ 605 (665)
...... ...+|+.|+|||++. .+..++.++|||||||++|||++|+.||..... ... .
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~---~ 262 (337)
T 3ll6_A 188 ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK--LRI---V 262 (337)
T ss_dssp CSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred ccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH--HHh---h
Confidence 643221 234789999999873 255688999999999999999999999975321 111 1
Q ss_pred HhhccCCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHHHhhhc
Q 005999 606 RTMRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLKMIQEIKESVM 655 (665)
Q Consensus 606 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 655 (665)
.. ..........+..+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 263 ~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 263 NG-KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp ----CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred cC-cccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 11 11112223344568899999999999999999999999999987543
No 206
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.4e-39 Score=344.92 Aligned_cols=252 Identities=11% Similarity=0.058 Sum_probs=183.7
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCc-hhhHHHHHHHH---HHHHhCCCCCCeeeee-------EEEEeCC-
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKT-ADTSAEAFEQH---MEAVGGLSHPNLVPIR-------AYFQAKG- 460 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e---~~~l~~l~h~niv~l~-------~~~~~~~- 460 (665)
.+.||+|+||.||+|... +++.||+|++..... .....+.+.+| +..++. +||||++++ +++...+
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~ 145 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQ 145 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTS
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCC
Confidence 367999999999999965 789999999987654 23445667777 455666 799988755 5554432
Q ss_pred ----------------eEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHH------HHHHHHHHHHHHHHHhCCCeeccC
Q 005999 461 ----------------ERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSC------LKIAEDVAQGLAYIHRASWLIHGN 518 (665)
Q Consensus 461 ----------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~~i~~~L~yLH~~~~iiH~D 518 (665)
..++||||+. |+|.+++... ...+.+..+ +.++.||+.||+|||+++ |+|||
T Consensus 146 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~----~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-ivHrD 219 (371)
T 3q60_A 146 PPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL----DFVYVFRGDEGILALHILTAQLIRLAANLQSKG-LVHGH 219 (371)
T ss_dssp CSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH----HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-EEETT
T ss_pred CCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh----ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-CccCc
Confidence 3799999999 8999999753 223455556 778899999999999999 99999
Q ss_pred CCCCceEeCCCCceEEeecccccccCCCCCCCCCCCcccCCccccC-CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCC
Q 005999 519 LKSSNVLLGADFEARLTDYCLSVLSDSSSVEDPDTVAYKAPEIRKS-SRRATSKSDVYAFGVLLLELLTGKHPSQHPYLA 597 (665)
Q Consensus 519 lk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~ 597 (665)
|||+|||++.++.+||+|||++...........+|+.|+|||++.. ...++.++|||||||++|||++|+.||......
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~ 299 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcc
Confidence 9999999999999999999999877654434457799999999862 156899999999999999999999999864322
Q ss_pred CccHHHH---HHhh--ccCCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHHHHh
Q 005999 598 PPDMLEW---VRTM--RVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLK--MIQEIKE 652 (665)
Q Consensus 598 ~~~~~~~---~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~~~~ 652 (665)
....... .... ..........+..+.+++.+||+.||++|||+.|+++ .++++..
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 361 (371)
T 3q60_A 300 IKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQN 361 (371)
T ss_dssp CTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHH
T ss_pred cccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHH
Confidence 1110000 0000 0001122356778999999999999999999999975 3444433
No 207
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=327.28 Aligned_cols=240 Identities=24% Similarity=0.360 Sum_probs=195.7
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
.+.||+|+||.||+|... +++.||+|.+.... ..+.+.+|+.++++++||||+++++++...+..++||||+.++
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 109 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAG 109 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCC
Confidence 367999999999999975 58899999997543 2356789999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC---CCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS---SVE 549 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~---~~~ 549 (665)
+|.+++.. ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ...
T Consensus 110 ~L~~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (314)
T 3com_A 110 SVSDIIRL----RNKTLTEDEIATILQSTLKGLEYLHFMR-KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 184 (314)
T ss_dssp EHHHHHHH----HTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCC
T ss_pred CHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCc
Confidence 99999863 2356899999999999999999999999 999999999999999999999999999765443 223
Q ss_pred CCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhc-cCCCchhhhHHHHHHHHHH
Q 005999 550 DPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMR-VDDGREENRLGMLTEVASV 628 (665)
Q Consensus 550 ~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~ 628 (665)
..+|+.|+|||++. +..++.++||||||+++|||++|+.||.... .......+.... .........+..+.+++.+
T Consensus 185 ~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 261 (314)
T 3com_A 185 VIGTPFWMAPEVIQ-EIGYNCVADIWSLGITAIEMAEGKPPYADIH--PMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQ 261 (314)
T ss_dssp CCSCGGGCCHHHHS-SSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHH
T ss_pred cCCCCCccChhhcC-CCCCCccccHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHhcCCCcccCCcccCCHHHHHHHHH
Confidence 46899999999987 5678999999999999999999999997532 111111111111 1112344567789999999
Q ss_pred cccCCCCCCCCHHHHHH
Q 005999 629 CSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 629 cl~~dP~~RPt~~evl~ 645 (665)
||+.||++|||+.|+++
T Consensus 262 ~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 262 CLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HTCSCTTTSCCHHHHTT
T ss_pred HccCChhhCcCHHHHHh
Confidence 99999999999999986
No 208
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5.9e-38 Score=329.20 Aligned_cols=241 Identities=18% Similarity=0.279 Sum_probs=197.2
Q ss_pred hHhCcccceEEEEEEE--CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCC------CeeeeeEEEEeCCeEEEEE
Q 005999 395 ELLGRGSIGTTYKAVL--DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHP------NLVPIRAYFQAKGERLVIY 466 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~l~~~~~~~~~~~lv~ 466 (665)
+.||+|+||.||+|.. .+++.||+|+++... ...+.+.+|+++++.++|+ +++++++++...+..++||
T Consensus 20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~ 96 (339)
T 1z57_A 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD---RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVF 96 (339)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSSH---HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEE
T ss_pred EEEecCCCeEEEEEEecCCCCcEEEEEEEecCC---chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEE
Confidence 6799999999999986 368899999996542 4456788899888887665 4999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCC------------------
Q 005999 467 DYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA------------------ 528 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~------------------ 528 (665)
||+ +++|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.
T Consensus 97 e~~-~~~l~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~ 171 (339)
T 1z57_A 97 ELL-GLSTYDFIKEN---GFLPFRLDHIRKMAYQICKSVNFLHSNK-LTHTDLKPENILFVQSDYTEAYNPKIKRDERTL 171 (339)
T ss_dssp ECC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCCCEEEEEC----CEEEEE
T ss_pred cCC-CCCHHHHHHhc---CCCCCcHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeccccccccCCccccccccc
Confidence 999 88999999753 2346899999999999999999999999 999999999999987
Q ss_pred -CCceEEeecccccccCCCCCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHh
Q 005999 529 -DFEARLTDYCLSVLSDSSSVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRT 607 (665)
Q Consensus 529 -~~~~kl~Dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 607 (665)
++.+||+|||++...........+|+.|+|||++. +..++.++|||||||++|||++|+.||.... ..+....+..
T Consensus 172 ~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~~~~~~~~~~ 248 (339)
T 1z57_A 172 INPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHD--SKEHLAMMER 248 (339)
T ss_dssp SCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHT-TSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC--HHHHHHHHHH
T ss_pred cCCCceEeeCcccccCccccccccCCccccChHHhh-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHH
Confidence 66899999999987766656667899999999987 5678999999999999999999999997532 1122222211
Q ss_pred hccCC------------------------------------------CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 608 MRVDD------------------------------------------GREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 608 ~~~~~------------------------------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
..... ......+..+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp HHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence 11110 012234677999999999999999999999986
Q ss_pred H
Q 005999 646 M 646 (665)
Q Consensus 646 ~ 646 (665)
.
T Consensus 329 h 329 (339)
T 1z57_A 329 H 329 (339)
T ss_dssp S
T ss_pred C
Confidence 3
No 209
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.4e-38 Score=326.41 Aligned_cols=243 Identities=23% Similarity=0.346 Sum_probs=200.3
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCc-------hhhHHHHHHHHHHHHhCCC-CCCeeeeeEEEEeCCeEEEE
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKT-------ADTSAEAFEQHMEAVGGLS-HPNLVPIRAYFQAKGERLVI 465 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 465 (665)
+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+++++++. ||||+++++++..++..++|
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 102 (298)
T 1phk_A 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102 (298)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred eeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEE
Confidence 57999999999999975 688999999975431 1123467889999999995 99999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCC
Q 005999 466 YDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDS 545 (665)
Q Consensus 466 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~ 545 (665)
|||+++++|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 103 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 176 (298)
T 1phk_A 103 FDLMKKGELFDYLTE-----KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176 (298)
T ss_dssp EECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred EeccCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEcCCCcEEEecccchhhcCC
Confidence 999999999999974 346899999999999999999999999 99999999999999999999999999976654
Q ss_pred CC--CCCCCCCcccCCcccc-----CCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC--Cchh
Q 005999 546 SS--VEDPDTVAYKAPEIRK-----SSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD--GREE 616 (665)
Q Consensus 546 ~~--~~~~gt~~y~aPE~~~-----~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--~~~~ 616 (665)
.. ....+++.|+|||++. ....++.++||||||+++|||++|+.||... ........+....... ....
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~ 254 (298)
T 1phk_A 177 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR--KQMLMLRMIMSGNYQFGSPEWD 254 (298)
T ss_dssp TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCCCTTTGG
T ss_pred CcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc--cHHHHHHHHhcCCcccCccccc
Confidence 32 3346899999999874 2456789999999999999999999999653 1223333332222221 1234
Q ss_pred hhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 617 NRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 617 ~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
..+..+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 255 DYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp GSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 56778999999999999999999999986
No 210
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=6.6e-38 Score=333.71 Aligned_cols=240 Identities=17% Similarity=0.235 Sum_probs=186.8
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCC------eEEEEEE
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKG------ERLVIYD 467 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~e 467 (665)
+.||+|+||.||+|... +++.||||++..........+.+.+|+.+++.++||||+++++++...+ ..++|||
T Consensus 31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e 110 (371)
T 2xrw_A 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 110 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEE
T ss_pred eeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEE
Confidence 67999999999999864 6889999999765544556677889999999999999999999997654 7899999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC
Q 005999 468 YQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 547 (665)
|+.+ +|.+.+.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 111 ~~~~-~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 181 (371)
T 2xrw_A 111 LMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 181 (371)
T ss_dssp CCSE-EHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC--------
T ss_pred cCCC-CHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEEEeeccccccccc
Confidence 9975 78888852 3889999999999999999999999 9999999999999999999999999997665432
Q ss_pred --CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccH-HHHHHhhcc--------------
Q 005999 548 --VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDM-LEWVRTMRV-------------- 610 (665)
Q Consensus 548 --~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~-~~~~~~~~~-------------- 610 (665)
....+|+.|+|||++. +..++.++|||||||++|||++|+.||.... ..+. ...+.....
T Consensus 182 ~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 182 MMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIKGGVLFPGTD--HIDQWNKVIEQLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp --------CTTCCHHHHT-TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred ccCCceecCCccCHHHhc-CCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 2346899999999987 5678999999999999999999999997532 1111 111100000
Q ss_pred ----CC---------------------CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005999 611 ----DD---------------------GREENRLGMLTEVASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 611 ----~~---------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 646 (665)
.. ......+..+.+|+.+||+.||++|||+.|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00 0011225679999999999999999999999873
No 211
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=6.3e-38 Score=328.20 Aligned_cols=237 Identities=16% Similarity=0.244 Sum_probs=193.7
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCC-CCCeeeeeEEEEe--CCeEEEEEEecC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS-HPNLVPIRAYFQA--KGERLVIYDYQP 470 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~e~~~ 470 (665)
+.||+|+||.||+|.. .+++.||+|+++... .+.+.+|++++++++ ||||+++++++.+ ....++||||+.
T Consensus 42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~ 116 (330)
T 3nsz_A 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVN 116 (330)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCC
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEecccc-----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccC
Confidence 6799999999999985 578899999987433 356889999999996 9999999999988 667899999999
Q ss_pred CCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCC-ceEEeecccccccCCCC--
Q 005999 471 NGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADF-EARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 471 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~-~~kl~Dfgl~~~~~~~~-- 547 (665)
+++|.+++. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||++.......
T Consensus 117 ~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~ 187 (330)
T 3nsz_A 117 NTDFKQLYQ--------TLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY 187 (330)
T ss_dssp CCCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC
T ss_pred chhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcc
Confidence 999999875 2788999999999999999999999 99999999999999776 89999999997654432
Q ss_pred CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHH------------hhccCC---
Q 005999 548 VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVR------------TMRVDD--- 612 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~------------~~~~~~--- 612 (665)
....+|..|+|||++.....++.++|||||||++|||++|+.||.........+..... ......
T Consensus 188 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (330)
T 3nsz_A 188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 267 (330)
T ss_dssp CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTH
T ss_pred ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccc
Confidence 33468999999999875577899999999999999999999999653322112221111 110000
Q ss_pred -------------------CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 613 -------------------GREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 613 -------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
......+..+.+|+.+||+.||++|||+.|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 268 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 011225678999999999999999999999986
No 212
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.7e-38 Score=329.97 Aligned_cols=244 Identities=23% Similarity=0.326 Sum_probs=194.4
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCch------hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEE
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA------DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIY 466 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 466 (665)
.+.||+|+||.||+|... +++.||||++...... ......+.+|++++++++||||+++++++..+. .++||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~ 93 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVL 93 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEE
Confidence 467999999999999965 6889999998754321 122345889999999999999999999997665 89999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCc---eEEeeccccccc
Q 005999 467 DYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFE---ARLTDYCLSVLS 543 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~---~kl~Dfgl~~~~ 543 (665)
||+++|+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||++...
T Consensus 94 e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 167 (322)
T 2ycf_A 94 ELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167 (322)
T ss_dssp ECCTTEETHHHHST-----TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSSSCCEEECCCTTCEEC
T ss_pred ecCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEecCCCCCeEEEccCccceec
Confidence 99999999999873 356899999999999999999999999 999999999999987654 999999999776
Q ss_pred CCCCC--CCCCCCcccCCcccc--CCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC--chhh
Q 005999 544 DSSSV--EDPDTVAYKAPEIRK--SSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG--REEN 617 (665)
Q Consensus 544 ~~~~~--~~~gt~~y~aPE~~~--~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 617 (665)
..... ...||+.|+|||++. ....++.++|||||||++|||++|+.||..... ...+...+........ ....
T Consensus 168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 246 (322)
T 2ycf_A 168 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIPEVWAE 246 (322)
T ss_dssp CCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC-SSCHHHHHHHTCCCCCHHHHTT
T ss_pred ccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch-HHHHHHHHHhCccccCchhhhh
Confidence 54321 224799999999863 245688999999999999999999999976432 2234444433322211 1234
Q ss_pred hHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 618 RLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 618 ~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.+..+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 247 VSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 5678999999999999999999999985
No 213
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.6e-38 Score=328.21 Aligned_cols=247 Identities=25% Similarity=0.405 Sum_probs=181.8
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|.. .+++.||+|++..... ....+.+.+|+.++++++||||+++++++...+..++||||+++++
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 99 (303)
T 2vwi_A 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGS 99 (303)
T ss_dssp EECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCB
T ss_pred heeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCc
Confidence 6799999999999984 4788999999865432 2345678899999999999999999999999999999999999999
Q ss_pred HHHHHhcC---CCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC---
Q 005999 474 LFNLIHGS---RSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS--- 547 (665)
Q Consensus 474 L~~~l~~~---~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~--- 547 (665)
|.+++... .......+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 100 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 178 (303)
T 2vwi_A 100 VLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 178 (303)
T ss_dssp HHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCHHHHHCC------
T ss_pred hHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCCChhhEEEcCCCCEEEEeccchheeccCCCcc
Confidence 99998631 1112456899999999999999999999999 9999999999999999999999999986554321
Q ss_pred -----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC--------Cc
Q 005999 548 -----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD--------GR 614 (665)
Q Consensus 548 -----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--------~~ 614 (665)
....+|+.|+|||++.....++.++||||||+++|||++|+.||.... ..+............ ..
T Consensus 179 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (303)
T 2vwi_A 179 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP--PMKVLMLTLQNDPPSLETGVQDKEM 256 (303)
T ss_dssp ---------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSC--GGGHHHHHHTSSCCCTTC-----CC
T ss_pred chhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCc--hhhHHHHHhccCCCccccccccchh
Confidence 223589999999998643568999999999999999999999997632 112211111111100 11
Q ss_pred hhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 615 EENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 615 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
....+..+.+++.+||+.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 257 LKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 2345677999999999999999999999987
No 214
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=344.20 Aligned_cols=246 Identities=20% Similarity=0.282 Sum_probs=181.1
Q ss_pred HhHhCcccceEEEEEEEC---CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEe--CCeEEEEEEe
Q 005999 394 AELLGRGSIGTTYKAVLD---NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA--KGERLVIYDY 468 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~ 468 (665)
.++||+|+||.||+|... ++..||+|++..... .+.+.+|++++++++||||+++++++.. ....++||||
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~ 101 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 101 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEEC
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeC
Confidence 457999999999999965 578899999975532 2357789999999999999999999954 6789999999
Q ss_pred cCCCCHHHHHhcCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEe----CCCCceEEeecccc
Q 005999 469 QPNGSLFNLIHGSR----SIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL----GADFEARLTDYCLS 540 (665)
Q Consensus 469 ~~~gsL~~~l~~~~----~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill----~~~~~~kl~Dfgl~ 540 (665)
+.+ +|.+++...+ ......+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 102 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 102 AEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp CSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred CCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 975 8888775321 112235999999999999999999999999 9999999999999 67789999999999
Q ss_pred cccCCC------CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCC--------ccHHHHHH
Q 005999 541 VLSDSS------SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP--------PDMLEWVR 606 (665)
Q Consensus 541 ~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~--------~~~~~~~~ 606 (665)
...... .....||+.|+|||++.+...++.++|||||||++|||++|+.||....... ..+...+.
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~ 259 (405)
T 3rgf_A 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 259 (405)
T ss_dssp C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHH
T ss_pred eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHH
Confidence 766432 1223589999999998755668999999999999999999999997533210 11222222
Q ss_pred hhccCCC-----------------------------------chhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 607 TMRVDDG-----------------------------------REENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 607 ~~~~~~~-----------------------------------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.+..... .....+..+.+|+.+||+.||++|||+.|+++
T Consensus 260 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 260 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1111110 00011456889999999999999999999987
No 215
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=5.9e-38 Score=321.84 Aligned_cols=242 Identities=23% Similarity=0.339 Sum_probs=200.5
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
.+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++.+.+..++|+||+.++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 106 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCC
Confidence 367999999999999975 6889999999765544455678899999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCC---CceEEeecccccccCCCCC-
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD---FEARLTDYCLSVLSDSSSV- 548 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~---~~~kl~Dfgl~~~~~~~~~- 548 (665)
+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.+ +.+||+|||++........
T Consensus 107 ~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~ 180 (287)
T 2wei_A 107 ELFDEIIK-----RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM 180 (287)
T ss_dssp BHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSC
T ss_pred CHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChhhEEEecCCCcccEEEeccCcceeecCCCcc
Confidence 99998864 245899999999999999999999999 9999999999999754 4799999999976654332
Q ss_pred -CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCC--chhhhHHHHHHH
Q 005999 549 -EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDG--REENRLGMLTEV 625 (665)
Q Consensus 549 -~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l 625 (665)
...+|+.|+|||.+. +.++.++||||||+++|+|++|+.||... ...++...+........ .....+..+.++
T Consensus 181 ~~~~~~~~y~aPE~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 256 (287)
T 2wei_A 181 KDRIGTAYYIAPEVLR--GTYDEKCDVWSAGVILYILLSGTPPFYGK--NEYDILKRVETGKYAFDLPQWRTISDDAKDL 256 (287)
T ss_dssp SCHHHHHTTCCHHHHT--TCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHCCCCCCSGGGTTSCHHHHHH
T ss_pred ccccCcccccChHHhc--CCCCCchhhHhHHHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCCCCchhhhhcCHHHHHH
Confidence 223688999999986 34899999999999999999999999753 22233333333222211 224567789999
Q ss_pred HHHcccCCCCCCCCHHHHHH
Q 005999 626 ASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 626 i~~cl~~dP~~RPt~~evl~ 645 (665)
+.+||+.||++|||+.|+++
T Consensus 257 i~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 257 IRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp HHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHcccChhhCcCHHHHhc
Confidence 99999999999999999997
No 216
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2e-38 Score=327.65 Aligned_cols=242 Identities=20% Similarity=0.316 Sum_probs=194.0
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|... ++..||+|++..... ...+.+.+|++++++++||||+++++++..++..++||||+++++
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 102 (302)
T 2j7t_A 25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSE--EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGA 102 (302)
T ss_dssp EEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEE
T ss_pred ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH--HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCc
Confidence 57999999999999976 588999999875432 345678899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCC---CCCCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDS---SSVED 550 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~---~~~~~ 550 (665)
|.+++... ...+++..++.++.||+.||+|||+.+ ++||||||+||+++.++.+||+|||++..... .....
T Consensus 103 l~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 177 (302)
T 2j7t_A 103 VDAIMLEL----DRGLTEPQIQVVCRQMLEALNFLHSKR-IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 177 (302)
T ss_dssp HHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC----
T ss_pred HHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEECCCCCEEEEECCCCccccccccccccc
Confidence 99988642 345899999999999999999999999 99999999999999999999999998743211 12234
Q ss_pred CCCCcccCCcccc----CCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhc-cCCCchhhhHHHHHHH
Q 005999 551 PDTVAYKAPEIRK----SSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMR-VDDGREENRLGMLTEV 625 (665)
Q Consensus 551 ~gt~~y~aPE~~~----~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l 625 (665)
.+|+.|+|||++. ....++.++||||||+++|||++|+.||.... .......+.... .........+..+.++
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 255 (302)
T 2j7t_A 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN--PMRVLLKIAKSDPPTLLTPSKWSVEFRDF 255 (302)
T ss_dssp -CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCCCCCSSGGGSCHHHHHH
T ss_pred cCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC--HHHHHHHHhccCCcccCCccccCHHHHHH
Confidence 6899999999873 25678899999999999999999999987532 112211111111 1112345567789999
Q ss_pred HHHcccCCCCCCCCHHHHHH
Q 005999 626 ASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 626 i~~cl~~dP~~RPt~~evl~ 645 (665)
+.+||+.||++|||+.|+++
T Consensus 256 i~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 256 LKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp HHHHSCSCTTTSCCHHHHTT
T ss_pred HHHHcccChhhCCCHHHHhc
Confidence 99999999999999999986
No 217
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=329.38 Aligned_cols=242 Identities=23% Similarity=0.359 Sum_probs=192.3
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEe------CCeEEEEE
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQA------KGERLVIY 466 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~------~~~~~lv~ 466 (665)
+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+.+++++ +||||+++++++.. .+..++||
T Consensus 30 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~ 106 (326)
T 2x7f_A 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVM 106 (326)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEE
T ss_pred EEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEE
Confidence 6799999999999997 478899999987554 2345688999999998 89999999999987 46889999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC
Q 005999 467 DYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS 546 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 546 (665)
||+.+|+|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 107 e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 182 (326)
T 2x7f_A 107 EFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182 (326)
T ss_dssp ECCTTEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCTTTC-----
T ss_pred EcCCCCcHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCcHHHEEEcCCCCEEEeeCcCceecCcC
Confidence 999999999999753 2356899999999999999999999999 999999999999999999999999998765432
Q ss_pred ---CCCCCCCCcccCCccccC----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhH
Q 005999 547 ---SVEDPDTVAYKAPEIRKS----SRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRL 619 (665)
Q Consensus 547 ---~~~~~gt~~y~aPE~~~~----~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (665)
.....+|+.|+|||++.. ...++.++|||||||++|||++|+.||.... .......+.............+
T Consensus 183 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 260 (326)
T 2x7f_A 183 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH--PMRALFLIPRNPAPRLKSKKWS 260 (326)
T ss_dssp --------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCCCCCSCSCSC
T ss_pred ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHhhcCccccCCccccC
Confidence 223358999999998752 3568899999999999999999999996532 1122222222222222234567
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 620 GMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 620 ~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
..+.+++.+||+.||++|||+.|+++
T Consensus 261 ~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 261 KKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHhccChhhCCCHHHHhh
Confidence 78999999999999999999999987
No 218
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7e-38 Score=332.68 Aligned_cols=240 Identities=22% Similarity=0.314 Sum_probs=195.3
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeC-----CeEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAK-----GERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e~ 468 (665)
+.||+|+||.||+|... ++..||+|++..... ....+.+.+|++++++++||||+++++++... ...++|+||
T Consensus 33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~ 111 (364)
T 3qyz_A 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111 (364)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCTTC-HHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEEC
T ss_pred EEeecCCCeEEEEEEECCCCeEEEEEEeccccC-cHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcc
Confidence 67999999999999864 788999999975432 34457789999999999999999999999764 468999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC-
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS- 547 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~- 547 (665)
+.+ +|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 112 ~~~-~L~~~l~~------~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 183 (364)
T 3qyz_A 112 MET-DLYKLLKT------QHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 183 (364)
T ss_dssp CSE-EHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred cCc-CHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChHhEEECCCCCEEEEeCcceEecCCCCC
Confidence 975 99999864 35899999999999999999999999 9999999999999999999999999997654321
Q ss_pred -----CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC----------
Q 005999 548 -----VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD---------- 612 (665)
Q Consensus 548 -----~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~---------- 612 (665)
....||+.|+|||++.....++.++|||||||++|||++|+.||.... ..+....+.......
T Consensus 184 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~ 261 (364)
T 3qyz_A 184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH--YLDQLNHILGILGSPSQEDLNCIIN 261 (364)
T ss_dssp BCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS--GGGHHHHHHHHHCSCCHHHHHTCCC
T ss_pred ccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC--hHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 233689999999987656668999999999999999999999997632 222222221111100
Q ss_pred --------------C-----chhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 613 --------------G-----REENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 613 --------------~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
. .....+..+.+|+.+||+.||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 01234567899999999999999999999987
No 219
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.5e-38 Score=337.86 Aligned_cols=243 Identities=18% Similarity=0.232 Sum_probs=195.2
Q ss_pred HhHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCC--------CCCeeeeeEEEE----eCC
Q 005999 394 AELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS--------HPNLVPIRAYFQ----AKG 460 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~----~~~ 460 (665)
.+.||+|+||+||+|.. .+++.||+|++.... ...+.+.+|++++++++ |+||+++++++. ...
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~ 118 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE---HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGT 118 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCC---cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCc
Confidence 36799999999999985 468899999997442 44567889999998885 788999999987 456
Q ss_pred eEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCCceEeCCCC---------
Q 005999 461 ERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA-SWLIHGNLKSSNVLLGADF--------- 530 (665)
Q Consensus 461 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~iiH~Dlk~~Nill~~~~--------- 530 (665)
..++||||+ +++|.+.+... ....+++..++.++.||+.||+|||++ + |+||||||+|||++.++
T Consensus 119 ~~~lv~e~~-~~~l~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH~~~g-ivHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 119 HICMVFEVL-GHHLLKWIIKS---NYQGLPLPCVKKIIQQVLQGLDYLHTKCR-IIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp EEEEEECCC-CCBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred eEEEEEecc-CccHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHeeEeccchhhhhhhhh
Confidence 889999999 56777766542 235699999999999999999999998 8 99999999999999775
Q ss_pred ----------------------------------------ceEEeecccccccCCCCCCCCCCCcccCCccccCCCCCCC
Q 005999 531 ----------------------------------------EARLTDYCLSVLSDSSSVEDPDTVAYKAPEIRKSSRRATS 570 (665)
Q Consensus 531 ----------------------------------------~~kl~Dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 570 (665)
.+||+|||++...........||+.|+|||++. +..++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~ 272 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLI-GSGYNT 272 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHH-TSCCCT
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhc-CCCCCc
Confidence 799999999987776666667999999999987 567999
Q ss_pred cchHHHHHHHHHHHHhCCCCCCCCCCCCc----cHHHHHHhhccC-----------------------------------
Q 005999 571 KSDVYAFGVLLLELLTGKHPSQHPYLAPP----DMLEWVRTMRVD----------------------------------- 611 (665)
Q Consensus 571 k~DvwSlGvvl~elltg~~P~~~~~~~~~----~~~~~~~~~~~~----------------------------------- 611 (665)
++|||||||++|||++|+.||........ +....+......
T Consensus 273 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
T 1wak_A 273 PADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFE 352 (397)
T ss_dssp HHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhH
Confidence 99999999999999999999976433221 111111111000
Q ss_pred -----CCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 612 -----DGREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 612 -----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.......+..+.+|+.+||+.||++|||+.|+++
T Consensus 353 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 353 VLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0112345677899999999999999999999986
No 220
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=8.1e-38 Score=355.76 Aligned_cols=250 Identities=23% Similarity=0.335 Sum_probs=205.2
Q ss_pred HhHhCcccceEEEEEEEC----CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEec
Q 005999 394 AELLGRGSIGTTYKAVLD----NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQ 469 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 469 (665)
.+.||+|+||.||+|... .+..||+|++..... ....+.+.+|+.++++++||||+++++++. ++..++||||+
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~ 472 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 472 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcC
Confidence 467999999999999864 356899999875443 345577999999999999999999999985 45689999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCCC-
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSV- 548 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~- 548 (665)
++|+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 473 ~~g~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 547 (656)
T 2j0j_A 473 TLGELRSFLQVR----KFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 547 (656)
T ss_dssp TTCBHHHHHHHT----TTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----
T ss_pred CCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchHhEEEeCCCCEEEEecCCCeecCCCcce
Confidence 999999999742 346899999999999999999999999 99999999999999999999999999977654321
Q ss_pred ---CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHH
Q 005999 549 ---EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTE 624 (665)
Q Consensus 549 ---~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 624 (665)
...+|+.|+|||++. +..++.++|||||||++|||++ |+.||... ...+....+..... ...+...+..+.+
T Consensus 548 ~~~~~~~t~~y~aPE~~~-~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~--~~~~~~~~i~~~~~-~~~~~~~~~~l~~ 623 (656)
T 2j0j_A 548 KASKGKLPIKWMAPESIN-FRRFTSASDVWMFGVCMWEILMHGVKPFQGV--KNNDVIGRIENGER-LPMPPNCPPTLYS 623 (656)
T ss_dssp ------CCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHHTCC-CCCCTTCCHHHHH
T ss_pred eccCCCCCcceeCHHHhc-CCCCCchhhHHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHcCCC-CCCCccccHHHHH
Confidence 224678999999987 5679999999999999999997 99999753 22233333333221 1234566788999
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHHHHhhh
Q 005999 625 VASVCSLKSPEQRPAMWQVLKMIQEIKESV 654 (665)
Q Consensus 625 li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 654 (665)
++.+||+.||++|||+.|+++.|+++.+..
T Consensus 624 li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 624 LMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999987653
No 221
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.8e-38 Score=334.98 Aligned_cols=245 Identities=16% Similarity=0.251 Sum_probs=199.3
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchh---------------hHHHHHHHHHHHHhCCCCCCeeeeeEEEEeC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTAD---------------TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAK 459 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---------------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 459 (665)
+.||+|+||.||+|.. +++.||+|++....... ...+.+.+|++++++++||||+++++++.+.
T Consensus 37 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 115 (348)
T 2pml_X 37 RTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNY 115 (348)
T ss_dssp EEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESS
T ss_pred EEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeC
Confidence 6799999999999999 88999999986442211 1127789999999999999999999999999
Q ss_pred CeEEEEEEecCCCCHHHH------HhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCeeccCCCCCceEeCCCCce
Q 005999 460 GERLVIYDYQPNGSLFNL------IHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR-ASWLIHGNLKSSNVLLGADFEA 532 (665)
Q Consensus 460 ~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~-~~~iiH~Dlk~~Nill~~~~~~ 532 (665)
+..++||||+++|+|.++ +... ....+++..++.++.||+.||+|||+ .+ |+||||||+||+++.++.+
T Consensus 116 ~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dl~p~Nil~~~~~~~ 191 (348)
T 2pml_X 116 DEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDKNGRV 191 (348)
T ss_dssp SEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHHHTSC-EECCCCCGGGEEECTTSCE
T ss_pred CeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHhccCC-EeecCCChHhEEEcCCCcE
Confidence 999999999999999998 4421 24679999999999999999999999 88 9999999999999999999
Q ss_pred EEeecccccccCCC-CCCCCCCCcccCCccccCCCCCCC-cchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhcc
Q 005999 533 RLTDYCLSVLSDSS-SVEDPDTVAYKAPEIRKSSRRATS-KSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRV 610 (665)
Q Consensus 533 kl~Dfgl~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~-k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 610 (665)
||+|||.+...... .....+|+.|+|||++.....++. ++||||||+++|||++|+.||..... ..++...+.....
T Consensus 192 kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~~i~~~~~ 270 (348)
T 2pml_X 192 KLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS-LVELFNNIRTKNI 270 (348)
T ss_dssp EECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC-SHHHHHHHTSCCC
T ss_pred EEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHhccCc
Confidence 99999999765433 234468999999999874435655 99999999999999999999976321 1233333322211
Q ss_pred CCCc-----------------hhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 611 DDGR-----------------EENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 611 ~~~~-----------------~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.... ....+..+.+++.+||+.||++|||+.|+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 271 EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1110 1456778999999999999999999999987
No 222
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.7e-38 Score=358.82 Aligned_cols=241 Identities=20% Similarity=0.270 Sum_probs=200.1
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCc-hhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEecC
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKT-ADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDYQP 470 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 470 (665)
.+.||+|+||.||+|... +++.||||+++.... .....+.+..|..++..+ +||||+++++++.+.+..|+||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 357999999999999965 678899999975422 123345678899999988 89999999999999999999999999
Q ss_pred CCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCC---CC
Q 005999 471 NGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDS---SS 547 (665)
Q Consensus 471 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~---~~ 547 (665)
+|+|.++++.. ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++++||+|||+++.... ..
T Consensus 426 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g-IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~ 499 (674)
T 3pfq_A 426 GGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT 499 (674)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTS-EECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCB
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC-eEeccCChhhEEEcCCCcEEEeecceeeccccCCccc
Confidence 99999999842 46899999999999999999999999 99999999999999999999999999975322 22
Q ss_pred CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHH
Q 005999 548 VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVAS 627 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 627 (665)
....||+.|+|||++. +..++.++|||||||++|||++|+.||... ...++...+.. .....+...+..+.+|+.
T Consensus 500 ~~~~GT~~Y~APE~l~-~~~~~~~~DvwSlGvilyelltG~~Pf~~~--~~~~~~~~i~~--~~~~~p~~~s~~~~~li~ 574 (674)
T 3pfq_A 500 KTFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQAPFEGE--DEDELFQSIME--HNVAYPKSMSKEAVAICK 574 (674)
T ss_dssp CCCCSCSSSCCHHHHT-CCCBSTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHS--SCCCCCTTSCHHHHHHHH
T ss_pred ccccCCCcccCHhhhc-CCCCCccceEechHHHHHHHHcCCCCCCCC--CHHHHHHHHHh--CCCCCCccCCHHHHHHHH
Confidence 3446899999999987 678999999999999999999999999762 22233333322 222345567788999999
Q ss_pred HcccCCCCCCCCH-----HHHHH
Q 005999 628 VCSLKSPEQRPAM-----WQVLK 645 (665)
Q Consensus 628 ~cl~~dP~~RPt~-----~evl~ 645 (665)
+||++||++||++ +||++
T Consensus 575 ~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 575 GLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp HHSCSSSTTCTTCSTTHHHHHHS
T ss_pred HHccCCHHHCCCCCCCcHHHHhc
Confidence 9999999999997 66654
No 223
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.9e-38 Score=331.82 Aligned_cols=240 Identities=18% Similarity=0.231 Sum_probs=193.0
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCe------EEEEEE
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGE------RLVIYD 467 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~~lv~e 467 (665)
+.||+|+||.||+|... +++.||||++..........+.+.+|+.++++++||||+++++++...+. .++|||
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e 109 (353)
T 3coi_A 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP 109 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEE
T ss_pred eeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEec
Confidence 57999999999999964 68999999997765545566788999999999999999999999987653 499999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC
Q 005999 468 YQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 547 (665)
|+. ++|.+++. ..+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 110 ~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 180 (353)
T 3coi_A 110 FMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADAEM 180 (353)
T ss_dssp CCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTCCEEECSTTCTTC-----
T ss_pred ccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEeECCCCcEEEeecccccCCCCCc
Confidence 997 58887764 24899999999999999999999999 9999999999999999999999999998766555
Q ss_pred CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHh-hc-----------------
Q 005999 548 VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRT-MR----------------- 609 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~-~~----------------- 609 (665)
....+|+.|+|||++.+...++.++|||||||++|||++|+.||.... ..+....+.. ..
T Consensus 181 ~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 258 (353)
T 3coi_A 181 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD--YLDQLTQILKVTGVPGTEFVQKLNDKAAKS 258 (353)
T ss_dssp ---CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC--HHHHHHHHHHHHCBCCHHHHTTCSCHHHHH
T ss_pred cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHHHHHhhHHHHH
Confidence 555789999999998754678999999999999999999999997632 1111111111 00
Q ss_pred ------cCC-----CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 610 ------VDD-----GREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 610 ------~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
... ......+..+.+++.+||+.||++|||+.|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 259 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 012345678999999999999999999999986
No 224
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=6.8e-38 Score=325.99 Aligned_cols=244 Identities=19% Similarity=0.252 Sum_probs=180.9
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||.||+|... +++.||+|++..........+.+.++..+++.++||||+++++++.+++..++||||+ ++.
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 109 (318)
T 2dyl_A 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTC 109 (318)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEE
T ss_pred ceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCc
Confidence 57999999999999975 6889999999876554444555666667788999999999999999999999999999 556
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCCceEeCCCCceEEeecccccccCCCC--CCC
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA-SWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS--VED 550 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~--~~~ 550 (665)
+..+... ....+++..++.++.||+.||+|||++ + |+||||||+||+++.++.+||+|||++....... ...
T Consensus 110 ~~~l~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (318)
T 2dyl_A 110 AEKLKKR----MQGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS 184 (318)
T ss_dssp HHHHHHH----HTSCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCGGGEEECTTSCEEECCCTTC------------
T ss_pred HHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHhhCC-EEeCCCCHHHEEECCCCCEEEEECCCchhccCCcccccc
Confidence 6555542 234689999999999999999999996 8 9999999999999999999999999986654322 233
Q ss_pred CCCCcccCCcccc----CCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhcc-CCCchhhhHHHHHHH
Q 005999 551 PDTVAYKAPEIRK----SSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRV-DDGREENRLGMLTEV 625 (665)
Q Consensus 551 ~gt~~y~aPE~~~----~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l 625 (665)
.+|+.|+|||++. ....++.++|||||||++|||++|+.||...... .+....+..... ........+..+.++
T Consensus 185 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l 263 (318)
T 2dyl_A 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-FEVLTKVLQEEPPLLPGHMGFSGDFQSF 263 (318)
T ss_dssp --CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-HHHHHHHHHSCCCCCCSSSCCCHHHHHH
T ss_pred CCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-HHHHHHHhccCCCCCCccCCCCHHHHHH
Confidence 5899999999985 2456889999999999999999999999753211 122222221111 111223456789999
Q ss_pred HHHcccCCCCCCCCHHHHHH
Q 005999 626 ASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 626 i~~cl~~dP~~RPt~~evl~ 645 (665)
+.+||+.||++|||+.|+++
T Consensus 264 i~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 264 VKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp HHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHccCChhHCcCHHHHhh
Confidence 99999999999999999987
No 225
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=7.4e-38 Score=325.27 Aligned_cols=243 Identities=17% Similarity=0.265 Sum_probs=194.6
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCC--CCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS--HPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||++...+++.||+|++..........+.+.+|++++++++ |+||+++++++.+++..++||| +.++
T Consensus 34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~ 112 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI 112 (313)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSE
T ss_pred EEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCC
Confidence 579999999999999888999999999776555566788999999999996 5999999999999999999999 5678
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC-----
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS----- 547 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~----- 547 (665)
+|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||++++ +.+||+|||++.......
T Consensus 113 ~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~ 185 (313)
T 3cek_A 113 DLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVK 185 (313)
T ss_dssp EHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEET-TEEEECCCSSSCC----------
T ss_pred cHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEEEC-CeEEEeeccccccccCccccccc
Confidence 99999974 246899999999999999999999999 999999999999964 899999999997654332
Q ss_pred CCCCCCCcccCCccccC----------CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhh
Q 005999 548 VEDPDTVAYKAPEIRKS----------SRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREEN 617 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~----------~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (665)
....||+.|+|||++.. ...++.++||||||+++|||++|+.||.........+..... .......+..
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~ 264 (313)
T 3cek_A 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID-PNHEIEFPDI 264 (313)
T ss_dssp ----CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHC-TTSCCCCCCC
T ss_pred cCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHh-cccccCCccc
Confidence 22358999999999863 146888999999999999999999999753221111211111 1111123344
Q ss_pred hHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005999 618 RLGMLTEVASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 618 ~~~~l~~li~~cl~~dP~~RPt~~evl~~ 646 (665)
.+..+.+++.+||+.||++|||+.|+++.
T Consensus 265 ~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 265 PEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred chHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 46779999999999999999999999874
No 226
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=6.5e-38 Score=332.60 Aligned_cols=243 Identities=16% Similarity=0.220 Sum_probs=188.6
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCch---------hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEe-----CC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTA---------DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA-----KG 460 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~ 460 (665)
+.||+|+||.||+|...++..||||++...... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 107 (362)
T 3pg1_A 28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMH 107 (362)
T ss_dssp EEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCC
T ss_pred EEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcc
Confidence 579999999999999888999999998653321 1234778999999999999999999999854 33
Q ss_pred eEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccc
Q 005999 461 ERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLS 540 (665)
Q Consensus 461 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~ 540 (665)
..++||||+. |+|.+++.. ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 108 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~ 181 (362)
T 3pg1_A 108 KLYLVTELMR-TDLAQVIHD----QRIVISPQHIQYFMYHILLGLHVLHEAG-VVHRDLHPGNILLADNNDITICDFNLA 181 (362)
T ss_dssp EEEEEEECCS-EEHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCTTC-
T ss_pred eEEEEEccCC-CCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCc-CEecCCChHHEEEcCCCCEEEEecCcc
Confidence 6899999998 589888874 2346899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCC--CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC------
Q 005999 541 VLSDSS--SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD------ 612 (665)
Q Consensus 541 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~------ 612 (665)
...... .....+|+.|+|||++.....++.++|||||||++|||++|+.||.... ..+....+.......
T Consensus 182 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~ 259 (362)
T 3pg1_A 182 REDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST--FYNQLNKIVEVVGTPKIEDVV 259 (362)
T ss_dssp --------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCHHHHH
T ss_pred cccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHcCCCChHHhh
Confidence 754432 2334588999999998755678999999999999999999999997632 111111111110000
Q ss_pred ------------------------CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 613 ------------------------GREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 613 ------------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
......+..+.+++.+||+.||++|||+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 260 MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 011233567899999999999999999999987
No 227
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.9e-38 Score=335.05 Aligned_cols=248 Identities=17% Similarity=0.267 Sum_probs=192.8
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeC--------------
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAK-------------- 459 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-------------- 459 (665)
+.||+|+||.||+|.. .+++.||+|++..... ...+|+++++.++||||++++++|...
T Consensus 13 ~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~ 86 (383)
T 3eb0_A 13 KTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDH 86 (383)
T ss_dssp EEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC--------------
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCccccccccccccc
Confidence 6799999999999986 5789999999865432 124789999999999999999998543
Q ss_pred ------------------------CeEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCee
Q 005999 460 ------------------------GERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLI 515 (665)
Q Consensus 460 ------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~ii 515 (665)
...++||||+++ +|.+.+..... ....+++..+..++.||+.||+|||+.+ |+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-i~ 163 (383)
T 3eb0_A 87 NKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIHSLG-IC 163 (383)
T ss_dssp -----------------------CCEEEEEECCCSE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT-EE
T ss_pred ccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCc-Cc
Confidence 348899999985 88777653211 3456999999999999999999999999 99
Q ss_pred ccCCCCCceEeC-CCCceEEeecccccccCCC--CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCC
Q 005999 516 HGNLKSSNVLLG-ADFEARLTDYCLSVLSDSS--SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQ 592 (665)
Q Consensus 516 H~Dlk~~Nill~-~~~~~kl~Dfgl~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~ 592 (665)
||||||+||+++ .++.+||+|||++...... .....+|+.|+|||++.+...++.++||||+||++|||++|+.||.
T Consensus 164 H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 243 (383)
T 3eb0_A 164 HRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFS 243 (383)
T ss_dssp CSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCC
Confidence 999999999998 6899999999999765433 3344689999999998755568999999999999999999999997
Q ss_pred CCCCCCccHHHHHHhhccCC--------------------------CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH-
Q 005999 593 HPYLAPPDMLEWVRTMRVDD--------------------------GREENRLGMLTEVASVCSLKSPEQRPAMWQVLK- 645 (665)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~- 645 (665)
... ....+...+....... ..+...+..+.+|+.+||+.||++|||+.|+++
T Consensus 244 ~~~-~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 244 GET-SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAH 322 (383)
T ss_dssp CSS-HHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CCC-hHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 632 1112222222111110 012235667999999999999999999999985
Q ss_pred -HHHHHHh
Q 005999 646 -MIQEIKE 652 (665)
Q Consensus 646 -~L~~~~~ 652 (665)
.++++..
T Consensus 323 p~f~~~~~ 330 (383)
T 3eb0_A 323 PFFDHLRN 330 (383)
T ss_dssp GGGHHHHH
T ss_pred HHHHHHHh
Confidence 3444443
No 228
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.1e-37 Score=334.58 Aligned_cols=242 Identities=19% Similarity=0.277 Sum_probs=188.0
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCe------EEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGE------RLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~~lv~e~ 468 (665)
+.||+|+||+||+|....+..+|+|++...... ..+|+++++.++||||++++++|...+. .++||||
T Consensus 46 ~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~ 119 (394)
T 4e7w_A 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY 119 (394)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEEECCTTS------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEEC
T ss_pred EEEeeCCCeEEEEEEECCCCeEEEEEEecCcch------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeec
Confidence 679999999999999876666899988654321 2368999999999999999999965443 7899999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeC-CCCceEEeecccccccCCC-
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLG-ADFEARLTDYCLSVLSDSS- 546 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~-~~~~~kl~Dfgl~~~~~~~- 546 (665)
++++.+....+... ....+++..++.++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||++......
T Consensus 120 ~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~ 196 (394)
T 4e7w_A 120 VPETVYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196 (394)
T ss_dssp CSEEHHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred cCccHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC
Confidence 98754433332111 2456899999999999999999999999 99999999999999 7999999999999765432
Q ss_pred -CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC-------------
Q 005999 547 -SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD------------- 612 (665)
Q Consensus 547 -~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~------------- 612 (665)
.....+|+.|+|||++.+...++.++||||+||++|||++|+.||..... ...+...++......
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~p~~~~~~~~~~~~~~ 275 (394)
T 4e7w_A 197 PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG-IDQLVEIIKVLGTPSREQIKTMNPNYME 275 (394)
T ss_dssp CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHCGGGSS
T ss_pred CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhhChhhhh
Confidence 33446899999999987556699999999999999999999999976321 112222222111100
Q ss_pred ---------C----chhhhHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005999 613 ---------G----REENRLGMLTEVASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 613 ---------~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 646 (665)
. .....+..+.+|+.+||+.||++|||+.|+++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 276 HKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp SCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 0 112355689999999999999999999999873
No 229
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=8.4e-38 Score=322.61 Aligned_cols=240 Identities=20% Similarity=0.385 Sum_probs=189.5
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEe-------------C
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA-------------K 459 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------------~ 459 (665)
.+.||+|+||.||+|... +++.||+|++... ....+.+.+|+.++++++||||+++++++.+ .
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 87 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKK 87 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccC
Confidence 357999999999999964 7889999998643 2455778999999999999999999998865 3
Q ss_pred CeEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeeccc
Q 005999 460 GERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCL 539 (665)
Q Consensus 460 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl 539 (665)
+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 88 STLFIQMEYCENGTLYDLIHSE----NLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp EEEEEEEECCCSCBHHHHHHHS----CGGGCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred CceEEEEecCCCCCHHHhhhcc----ccccchHHHHHHHHHHHHHHHHHHhCC-eecccCCHHhEEEcCCCCEEEeeCcc
Confidence 5688999999999999999752 345788999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCC-----------------CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHH
Q 005999 540 SVLSDSS-----------------SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDML 602 (665)
Q Consensus 540 ~~~~~~~-----------------~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~ 602 (665)
+...... .....+|+.|+|||++.....++.++|||||||++|||++ ||.... ......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-~~~~~~ 238 (303)
T 1zy4_A 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-ERVNIL 238 (303)
T ss_dssp CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-HHHHHH
T ss_pred hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-hHHHHH
Confidence 8765421 1223478999999998755578999999999999999998 443210 111222
Q ss_pred HHHHhhcc--CCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 603 EWVRTMRV--DDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 603 ~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
..+..... ........+..+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 239 KKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 22222111 11234455677999999999999999999999986
No 230
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=320.14 Aligned_cols=243 Identities=17% Similarity=0.247 Sum_probs=194.7
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCch--hhHHHHHHHHHHHHhCCCCCCeeeeeEEEE--eCCeEEEEEEec
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTA--DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ--AKGERLVIYDYQ 469 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~lv~e~~ 469 (665)
+.||+|+||.||++.. .++..||+|++...... ....+.+.+|++++++++||||+++++++. +....++||||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 90 (305)
T 2wtk_C 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYC 90 (305)
T ss_dssp CEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECC
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhc
Confidence 5799999999999996 46889999999754321 234577899999999999999999999984 455789999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC--
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS-- 547 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~-- 547 (665)
.++ |.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 91 ~~~-l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~ 165 (305)
T 2wtk_C 91 VCG-MQEMLDSV---PEKRFPVCQAHGYFCQLIDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD 165 (305)
T ss_dssp SEE-HHHHHHHS---TTCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSS
T ss_pred cCC-HHHHHHhC---cccccCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEcCCCcEEeeccccccccCccccc
Confidence 886 77777643 2456899999999999999999999999 9999999999999999999999999997654321
Q ss_pred ---CCCCCCCcccCCccccCCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHH
Q 005999 548 ---VEDPDTVAYKAPEIRKSSR-RATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLT 623 (665)
Q Consensus 548 ---~~~~gt~~y~aPE~~~~~~-~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 623 (665)
....+|+.|+|||++.... .++.++||||||+++|||++|+.||... ...+....+.... ...+...+..+.
T Consensus 166 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~i~~~~--~~~~~~~~~~l~ 241 (305)
T 2wtk_C 166 DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD--NIYKLFENIGKGS--YAIPGDCGPPLS 241 (305)
T ss_dssp CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHCC--CCCCSSSCHHHH
T ss_pred cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc--hHHHHHHHHhcCC--CCCCCccCHHHH
Confidence 2345899999999986322 2477999999999999999999999752 1122323222221 123445677899
Q ss_pred HHHHHcccCCCCCCCCHHHHHHH
Q 005999 624 EVASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 624 ~li~~cl~~dP~~RPt~~evl~~ 646 (665)
+++.+||+.||++|||+.|+++.
T Consensus 242 ~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 242 DLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHS
T ss_pred HHHHHHccCChhhCCCHHHHhcC
Confidence 99999999999999999999974
No 231
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.1e-38 Score=329.31 Aligned_cols=244 Identities=22% Similarity=0.291 Sum_probs=176.5
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHH-HHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHME-AVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|... +++.||+|++....... ....+..|+. +++.++||||+++++++..++..++||||+.+
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEK-EQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHH-HHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred heeccCCCEEEEEEEEcCCCCEEEEEEeecccCch-HHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 67999999999999975 78899999997665433 3334445555 77888999999999999999999999999986
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCCceEeCCCCceEEeecccccccCCCC--CC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA-SWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS--VE 549 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~--~~ 549 (665)
+|.+++..........+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++....... ..
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 184 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTR 184 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS-CCCSCCCGGGEEEETTTEEEECCCSSSCC---------
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC-EeECCCCHHHEEEcCCCCEEEccCCCceeccccccccc
Confidence 888877532222345689999999999999999999998 8 9999999999999999999999999997654432 22
Q ss_pred CCCCCcccCCcccc---CCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC------CchhhhHH
Q 005999 550 DPDTVAYKAPEIRK---SSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD------GREENRLG 620 (665)
Q Consensus 550 ~~gt~~y~aPE~~~---~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 620 (665)
..||+.|+|||++. .+..++.++||||||+++|||++|+.||....... +......... ......+.
T Consensus 185 ~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 260 (327)
T 3aln_A 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF----DQLTQVVKGDPPQLSNSEEREFSP 260 (327)
T ss_dssp ---------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCCCCSCCCCCCCCSSCCCCH
T ss_pred CCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH----HHHHHHhcCCCCCCCCcccccCCH
Confidence 35899999999983 24568999999999999999999999997532111 1111111110 11234677
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 621 MLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 621 ~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.+.+++.+||+.||++|||+.|+++
T Consensus 261 ~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 261 SFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHhhCChhhCcCHHHHHh
Confidence 8999999999999999999999987
No 232
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.5e-37 Score=324.62 Aligned_cols=243 Identities=16% Similarity=0.256 Sum_probs=191.5
Q ss_pred hHhCcccceEEEEEEE--CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC---CCCCeeeeeEEEE-----eCCeEEE
Q 005999 395 ELLGRGSIGTTYKAVL--DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL---SHPNLVPIRAYFQ-----AKGERLV 464 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~-----~~~~~~l 464 (665)
+.||+|+||.||+|.. .+++.||+|++............+.+|+.+++.+ +||||+++++++. .....++
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l 96 (326)
T 1blx_A 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL 96 (326)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEE
T ss_pred eeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEE
Confidence 5799999999999997 4688999999875443222223455666666555 8999999999987 4567899
Q ss_pred EEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccC
Q 005999 465 IYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSD 544 (665)
Q Consensus 465 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~ 544 (665)
||||+. |+|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 97 v~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~g-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 171 (326)
T 1blx_A 97 VFEHVD-QDLTTYLDKV---PEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYS 171 (326)
T ss_dssp EEECCS-CBHHHHHHHS---CTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCCCCC
T ss_pred EEecCC-CCHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHHHeEEcCCCCEEEecCccccccc
Confidence 999998 5999999753 2345899999999999999999999999 9999999999999999999999999987654
Q ss_pred CC--CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHH-HhhccCC---------
Q 005999 545 SS--SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWV-RTMRVDD--------- 612 (665)
Q Consensus 545 ~~--~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~-~~~~~~~--------- 612 (665)
.. .....+|+.|+|||++. +..++.++|||||||++|||++|+.||.... ..+....+ .......
T Consensus 172 ~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~ 248 (326)
T 1blx_A 172 FQMALTSVVVTLWYRAPEVLL-QSSYATPVDLWSVGCIFAEMFRRKPLFRGSS--DVDQLGKILDVIGLPGEEDWPRDVA 248 (326)
T ss_dssp GGGGGCCCCCCCTTCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred CCCCccccccccceeCHHHHh-cCCCCcchhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHHHcCCCCcccCccccc
Confidence 32 23346899999999987 5678999999999999999999999997532 11222211 1111000
Q ss_pred ---------------CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 613 ---------------GREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 613 ---------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
......+..+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 012345677899999999999999999999985
No 233
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.7e-37 Score=335.83 Aligned_cols=242 Identities=21% Similarity=0.281 Sum_probs=188.5
Q ss_pred HhHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeC------CeEEEEE
Q 005999 394 AELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAK------GERLVIY 466 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ 466 (665)
.+.||+|+||.||+|... +++.||||++..... ...+|++++++++||||++++++|... ...++||
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~ 132 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 132 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEE
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeeh
Confidence 367999999999999975 689999999865432 234789999999999999999998542 1367899
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCC-CceEEeecccccccCC
Q 005999 467 DYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD-FEARLTDYCLSVLSDS 545 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~-~~~kl~Dfgl~~~~~~ 545 (665)
||+++ +|.+.+.... .....+++..++.++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||+++....
T Consensus 133 e~~~~-~l~~~~~~~~-~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 133 DYVPE-TVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp ECCCE-EHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred hcccc-cHHHHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 99986 6766654211 12456999999999999999999999999 9999999999999965 6789999999976543
Q ss_pred C--CCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC-----------
Q 005999 546 S--SVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD----------- 612 (665)
Q Consensus 546 ~--~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~----------- 612 (665)
. .....+|+.|+|||++.+...++.++|||||||++|||++|+.||.... ....+...+.......
T Consensus 210 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~-~~~~l~~i~~~lg~p~~~~~~~~~~~~ 288 (420)
T 1j1b_A 210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-GVDQLVEIIKVLGTPTREQIREMNPNY 288 (420)
T ss_dssp TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCSCCHHHHHHHCSCC
T ss_pred CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 2 2344689999999998755579999999999999999999999997632 1112322222111100
Q ss_pred ---C------------chhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 613 ---G------------REENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 613 ---~------------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
. .....+..+.+|+.+||+.||++|||+.|+++
T Consensus 289 ~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 0 11234577999999999999999999999986
No 234
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=320.83 Aligned_cols=239 Identities=21% Similarity=0.269 Sum_probs=186.3
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEE--------------eC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQ--------------AK 459 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--------------~~ 459 (665)
+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++. +.
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~ 94 (320)
T 2i6l_A 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD--PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTEL 94 (320)
T ss_dssp EECC-----CEEEEEETTTTEEEEEEEEECCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSC
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecCC--hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccccc
Confidence 57999999999999976 48899999987553 345677899999999999999999999873 34
Q ss_pred CeEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeC-CCCceEEeecc
Q 005999 460 GERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLG-ADFEARLTDYC 538 (665)
Q Consensus 460 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~-~~~~~kl~Dfg 538 (665)
...++||||+. |+|.+++.. ..+++..++.++.|++.||+|||+.+ |+||||||+||+++ +++.+||+|||
T Consensus 95 ~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~Dfg 166 (320)
T 2i6l_A 95 NSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANLFINTEDLVLKIGDFG 166 (320)
T ss_dssp SEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTTEEEECCCT
T ss_pred CceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCeEEEccCc
Confidence 67899999998 599999863 45899999999999999999999999 99999999999997 56799999999
Q ss_pred cccccCCCC------CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccC-
Q 005999 539 LSVLSDSSS------VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVD- 611 (665)
Q Consensus 539 l~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~- 611 (665)
++....... ....+|..|+|||.+.....++.++|||||||++|||++|+.||.... ..+....+......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~~~~~~~~~~~~~~~ 244 (320)
T 2i6l_A 167 LARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH--ELEQMQLILESIPVV 244 (320)
T ss_dssp TCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHSCCC
T ss_pred cccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHhcCCC
Confidence 997654321 122468899999988755778999999999999999999999997632 11111111111000
Q ss_pred ----------------------C-C----chhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 612 ----------------------D-G----REENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 612 ----------------------~-~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
. . .....+..+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred chhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0 0 11235678999999999999999999999987
No 235
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.8e-37 Score=326.40 Aligned_cols=242 Identities=20% Similarity=0.271 Sum_probs=193.4
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeC-----CeEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAK-----GERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e~ 468 (665)
+.||+|+||.||+|... +++.||||++..... ......+.+|++++++++||||+++++++... ...++||||
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~ 95 (353)
T 2b9h_A 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK-PLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQEL 95 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECC
T ss_pred eEEcCCCCeEEEEEEECCCCcEEEEEeeccccc-chHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEec
Confidence 57999999999999965 688999999965432 34456788999999999999999999998654 678999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC-
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS- 547 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~- 547 (665)
+. |+|.+++.. ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 96 ~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 167 (353)
T 2b9h_A 96 MQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167 (353)
T ss_dssp CS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred cC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEcCCCcEEEEecccccccccccc
Confidence 97 599999874 35899999999999999999999999 9999999999999999999999999997654321
Q ss_pred ------------CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCC-----------------
Q 005999 548 ------------VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP----------------- 598 (665)
Q Consensus 548 ------------~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~----------------- 598 (665)
....||+.|+|||++..+..++.++|||||||++|||++|+.||.......
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 247 (353)
T 2b9h_A 168 DNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247 (353)
T ss_dssp ------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTT
T ss_pred cccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhcc
Confidence 123579999999987655778999999999999999999999997532100
Q ss_pred ------ccHHHHHHhhccCCC-----chhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 599 ------PDMLEWVRTMRVDDG-----REENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 599 ------~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
....+++........ .....+..+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp TTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 001111111100000 11245677899999999999999999999987
No 236
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.8e-37 Score=330.38 Aligned_cols=242 Identities=19% Similarity=0.286 Sum_probs=193.7
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCC-----------CCCeeeeeEEEEeCC--
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS-----------HPNLVPIRAYFQAKG-- 460 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~~~~~-- 460 (665)
+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.++++++ ||||+++++++...+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 101 (373)
T 1q8y_A 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK---VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPN 101 (373)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETT
T ss_pred EeeeecCCeEEEEEEecCCCcEEEEEEecCCc---cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCC
Confidence 6799999999999996 578899999997543 34567788999888876 899999999998654
Q ss_pred --eEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCCceEeC------CCCc
Q 005999 461 --ERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA-SWLIHGNLKSSNVLLG------ADFE 531 (665)
Q Consensus 461 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-~~iiH~Dlk~~Nill~------~~~~ 531 (665)
..++||||+ +++|.+++... ....+++..++.++.||+.||+|||++ + |+||||||+|||++ ..+.
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 102 GVHVVMVFEVL-GENLLALIKKY---EHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp EEEEEEEECCC-CEEHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEE
T ss_pred CceEEEEEecC-CCCHHHHHHHh---hccCCcHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChHHeEEeccCCCcCcce
Confidence 789999999 88999999753 234589999999999999999999998 8 99999999999994 4458
Q ss_pred eEEeecccccccCCCCCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCC----c-cHHHHHH
Q 005999 532 ARLTDYCLSVLSDSSSVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAP----P-DMLEWVR 606 (665)
Q Consensus 532 ~kl~Dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~----~-~~~~~~~ 606 (665)
+||+|||++...........+|+.|+|||++. +..++.++|||||||++|||++|+.||....... . .+...+.
T Consensus 177 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (373)
T 1q8y_A 177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLL-GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255 (373)
T ss_dssp EEECCCTTCEETTBCCCSCCSCGGGCCHHHHH-TCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred EEEcccccccccCCCCCCCCCCccccCcHHHh-CCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHH
Confidence 99999999987776666667999999999987 5678999999999999999999999997543211 1 1111111
Q ss_pred hhcc---------------------------------------CCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 607 TMRV---------------------------------------DDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 607 ~~~~---------------------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.... ........+..+.+|+.+||+.||++|||+.|+++
T Consensus 256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred hcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 1100 00123455678999999999999999999999987
No 237
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.3e-37 Score=325.79 Aligned_cols=240 Identities=17% Similarity=0.243 Sum_probs=194.4
Q ss_pred hHhCcccceEEEEEEEC--CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCC------eeeeeEEEEeCCeEEEEE
Q 005999 395 ELLGRGSIGTTYKAVLD--NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPN------LVPIRAYFQAKGERLVIY 466 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~~~lv~ 466 (665)
+.||+|+||.||+|... ++..||+|+++... ...+.+.+|++++++++|++ ++.+++++...+..++||
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 101 (355)
T 2eu9_A 25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNVG---KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAF 101 (355)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEE
T ss_pred EEeeccCCeEEEEEEecCCCceEEEEEEEcccc---cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEE
Confidence 67999999999999964 34789999997542 44567888999998887766 899999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEe-------------------C
Q 005999 467 DYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLL-------------------G 527 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill-------------------~ 527 (665)
||+ +++|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+|||+ +
T Consensus 102 e~~-~~~l~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~ 176 (355)
T 2eu9_A 102 ELL-GKNTFEFLKEN---NFQPYPLPHVRHMAYQLCHALRFLHENQ-LTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 176 (355)
T ss_dssp ECC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEESCCCEEEEECCC-CCCEEEE
T ss_pred ecc-CCChHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeccccccccccccccccccc
Confidence 999 66787777643 2346899999999999999999999999 9999999999999 5
Q ss_pred CCCceEEeecccccccCCCCCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHh
Q 005999 528 ADFEARLTDYCLSVLSDSSSVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRT 607 (665)
Q Consensus 528 ~~~~~kl~Dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~ 607 (665)
.++.+||+|||++...........||+.|+|||++. +..++.++|||||||++|||++|+.||.... ..+....+..
T Consensus 177 ~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~~~~~~~~~~ 253 (355)
T 2eu9_A 177 KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHE--NREHLVMMEK 253 (355)
T ss_dssp SCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHH
T ss_pred CCCcEEEeecCccccccccccCCcCCCcccCCeeee-cCCCCCccchHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHH
Confidence 678999999999987766666667999999999987 5678999999999999999999999997532 1122222211
Q ss_pred hccCC------------------------------------------CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 608 MRVDD------------------------------------------GREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 608 ~~~~~------------------------------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
..... ......+..+.+|+.+||+.||++|||+.|+++
T Consensus 254 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 254 ILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 11110 011223557899999999999999999999985
No 238
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=4.9e-37 Score=328.31 Aligned_cols=190 Identities=19% Similarity=0.323 Sum_probs=163.9
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCC-CC-----CeeeeeEEEEeCCeEEEEEE
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS-HP-----NLVPIRAYFQAKGERLVIYD 467 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~~~~~lv~e 467 (665)
+.||+|+||.||+|... +++.||||+++... ...+.+..|+.+++.++ |+ +|+++++++...+..++|||
T Consensus 60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 136 (382)
T 2vx3_A 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK---AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFE 136 (382)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSSH---HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEE
T ss_pred EEEeecCCEEEEEEEEcCCCcEEEEEEEeccH---HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEe
Confidence 67999999999999865 68899999997542 34556777888887774 55 49999999999999999999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCCeeccCCCCCceEeC--CCCceEEeeccccccc
Q 005999 468 YQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHR--ASWLIHGNLKSSNVLLG--ADFEARLTDYCLSVLS 543 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~--~~~iiH~Dlk~~Nill~--~~~~~kl~Dfgl~~~~ 543 (665)
|+.+ +|.+++... ....+++..+..++.|++.||+|||. .+ |+||||||+|||++ .++.+||+|||++...
T Consensus 137 ~~~~-~L~~~l~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~~~-ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~ 211 (382)
T 2vx3_A 137 MLSY-NLYDLLRNT---NFRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 211 (382)
T ss_dssp CCCC-BHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHTSTTTC-EECCCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred cCCC-CHHHHHhhc---CcCCCCHHHHHHHHHHHHHHHHHhccCCCC-EEcCCCCcccEEEecCCCCcEEEEeccCceec
Confidence 9964 999999753 23458999999999999999999994 56 99999999999995 4788999999999887
Q ss_pred CCCCCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 005999 544 DSSSVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593 (665)
Q Consensus 544 ~~~~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~ 593 (665)
........+|+.|+|||++. +..++.++|||||||++|||++|+.||..
T Consensus 212 ~~~~~~~~~t~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 212 GQRIYQYIQSRFYRSPEVLL-GMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp TCCCCSSCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccccccCCccccChHHHc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 76666667999999999987 56799999999999999999999999976
No 239
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.3e-37 Score=326.79 Aligned_cols=245 Identities=20% Similarity=0.271 Sum_probs=180.0
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCe-------EEEEE
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGE-------RLVIY 466 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-------~~lv~ 466 (665)
+.||+|+||.||+|... ++..||||++..... ..+.+.++++.++.++||||++++++|...+. .++||
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~ 105 (360)
T 3e3p_A 29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR---FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVM 105 (360)
T ss_dssp ----------CEEEEETTTCCEEEEEEEECCTT---CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEE
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEecCcc---ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEe
Confidence 57999999999999974 688999999865432 22345677888888899999999999976443 78999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--hCCCeeccCCCCCceEeCC-CCceEEeeccccccc
Q 005999 467 DYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH--RASWLIHGNLKSSNVLLGA-DFEARLTDYCLSVLS 543 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH--~~~~iiH~Dlk~~Nill~~-~~~~kl~Dfgl~~~~ 543 (665)
||+.+ +|.+.+.... .....+++..+..++.|++.||+||| +.+ |+||||||+|||++. ++.+||+|||++...
T Consensus 106 e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~-ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~ 182 (360)
T 3e3p_A 106 EYVPD-TLHRCCRNYY-RRQVAPPPILIKVFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKL 182 (360)
T ss_dssp ECCSC-BHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC-CBCSCCCGGGEEEETTTTEEEECCCTTCBCC
T ss_pred ecccc-cHHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhCCCCC-eecCcCCHHHEEEeCCCCcEEEeeCCCceec
Confidence 99987 5554443211 13456899999999999999999999 888 999999999999996 899999999999776
Q ss_pred CCCC--CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC---------
Q 005999 544 DSSS--VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD--------- 612 (665)
Q Consensus 544 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~--------- 612 (665)
.... ....+|+.|+|||++.+...++.++|||||||++|||++|+.||..... ...+....+......
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3e3p_A 183 SPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS-AGQLHEIVRVLGCPSREVLRKLNP 261 (360)
T ss_dssp CTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHCT
T ss_pred CCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh-HHHHHHHHHHcCCCCHHHHHhccc
Confidence 5433 2345899999999987555689999999999999999999999976321 112222222111100
Q ss_pred --------------------CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005999 613 --------------------GREENRLGMLTEVASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 613 --------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 646 (665)
......+..+.+|+.+||+.||++|||+.|+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 262 SHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp TCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred chhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0111246789999999999999999999999873
No 240
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.9e-37 Score=325.52 Aligned_cols=240 Identities=18% Similarity=0.254 Sum_probs=169.1
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEe----CCeEEEEEEec
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA----KGERLVIYDYQ 469 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~ 469 (665)
++||+|+||.||+|... +++.||+|++.... ...+ +....++.++||||+++++++.. +...++||||+
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 108 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP---KARQ---EVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECM 108 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESSH---HHHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCcH---HHHH---HHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEecc
Confidence 46999999999999976 68899999986532 2222 22233556799999999999876 44589999999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCC---CCceEEeecccccccCCC
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA---DFEARLTDYCLSVLSDSS 546 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~---~~~~kl~Dfgl~~~~~~~ 546 (665)
++|+|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++. ++.+||+|||++......
T Consensus 109 ~gg~L~~~l~~~---~~~~l~~~~~~~i~~ql~~~l~~LH~~~-ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~ 184 (336)
T 3fhr_A 109 EGGELFSRIQER---GDQAFTEREAAEIMRDIGTAIQFLHSHN-IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184 (336)
T ss_dssp TTEEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---
T ss_pred CCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEEecCCCceEEEeccccceecccc
Confidence 999999999853 2346999999999999999999999999 999999999999986 455999999999766543
Q ss_pred C-CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc--cHHHHHHhhc--cCCCchhhhHHH
Q 005999 547 S-VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP--DMLEWVRTMR--VDDGREENRLGM 621 (665)
Q Consensus 547 ~-~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~ 621 (665)
. ....+|+.|+|||++. +..++.++|||||||++|||++|+.||........ .....+.... .........+..
T Consensus 185 ~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (336)
T 3fhr_A 185 ALQTPCYTPYYVAPEVLG-PEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSED 263 (336)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHH
T ss_pred ccccCCCCcCccChhhhC-CCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHH
Confidence 2 3345799999999986 56788999999999999999999999975432211 1111111111 111122456778
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 005999 622 LTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 622 l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
+.+++.+||+.||++|||+.|+++
T Consensus 264 ~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 264 AKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHCCCChhHCcCHHHHhc
Confidence 999999999999999999999998
No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=7.4e-38 Score=326.40 Aligned_cols=235 Identities=19% Similarity=0.337 Sum_probs=193.9
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchh----hHHHHHHHHHHHHhCCC--CCCeeeeeEEEEeCCeEEEEEE
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTAD----TSAEAFEQHMEAVGGLS--HPNLVPIRAYFQAKGERLVIYD 467 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e 467 (665)
+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|+.++++++ |+||+++++++...+..++|+|
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e 128 (320)
T 3a99_A 49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 128 (320)
T ss_dssp EECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEE
Confidence 6799999999999985 478899999987553221 12234667889999885 5999999999999999999999
Q ss_pred ecCC-CCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeC-CCCceEEeecccccccCC
Q 005999 468 YQPN-GSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLG-ADFEARLTDYCLSVLSDS 545 (665)
Q Consensus 468 ~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~-~~~~~kl~Dfgl~~~~~~ 545 (665)
|+.+ ++|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||+++ +++.+||+|||++.....
T Consensus 129 ~~~~~~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~ 202 (320)
T 3a99_A 129 RPEPVQDLFDFITE-----RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKD 202 (320)
T ss_dssp CCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCS
T ss_pred cCCCCccHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeCCCCHHHEEEeCCCCCEEEeeCcccccccc
Confidence 9986 899999874 346899999999999999999999999 99999999999999 789999999999977654
Q ss_pred CC-CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHH
Q 005999 546 SS-VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTE 624 (665)
Q Consensus 546 ~~-~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 624 (665)
.. ....+|+.|+|||++.....++.++||||||+++|||++|+.||... ..... .........+..+.+
T Consensus 203 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~-------~~~~~---~~~~~~~~~~~~~~~ 272 (320)
T 3a99_A 203 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-------EEIIR---GQVFFRQRVSSECQH 272 (320)
T ss_dssp SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-------HHHHH---CCCCCSSCCCHHHHH
T ss_pred ccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh-------hhhhc---ccccccccCCHHHHH
Confidence 33 33468999999999874444578899999999999999999998642 11111 111233456678999
Q ss_pred HHHHcccCCCCCCCCHHHHHH
Q 005999 625 VASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 625 li~~cl~~dP~~RPt~~evl~ 645 (665)
++.+||+.||++|||+.|+++
T Consensus 273 li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 273 LIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp HHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHccCChhhCcCHHHHhc
Confidence 999999999999999999987
No 242
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=323.56 Aligned_cols=236 Identities=19% Similarity=0.334 Sum_probs=188.6
Q ss_pred HhHhCcccceEEEEEEE-CCeEEEEEEEecCCCchh----hHHHHHHHHHHHHhCC----CCCCeeeeeEEEEeCCeEEE
Q 005999 394 AELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTAD----TSAEAFEQHMEAVGGL----SHPNLVPIRAYFQAKGERLV 464 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l----~h~niv~l~~~~~~~~~~~l 464 (665)
.+.||+|+||.||+|.. .+++.||+|++....... .....+.+|+.++.++ +||||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 36799999999999985 478899999997554321 1223456788888887 89999999999999999999
Q ss_pred EEEe-cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeC-CCCceEEeecccccc
Q 005999 465 IYDY-QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLG-ADFEARLTDYCLSVL 542 (665)
Q Consensus 465 v~e~-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~-~~~~~kl~Dfgl~~~ 542 (665)
|+|| +.+++|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||+++ .++.+||+|||++..
T Consensus 116 v~e~~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~ 189 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITE-----KGPLGEGPSRCFFGQVVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSGAL 189 (312)
T ss_dssp EEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHHT-EECCCCSGGGEEEETTTTEEEECCCSSCEE
T ss_pred EEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChhhEEEeCCCCeEEEEEcchhhh
Confidence 9999 789999999974 245899999999999999999999999 99999999999999 889999999999976
Q ss_pred cCCCC-CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHH
Q 005999 543 SDSSS-VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGM 621 (665)
Q Consensus 543 ~~~~~-~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (665)
..... ....+|..|+|||++......+.++||||||+++|||++|+.||... ..... .........+..
T Consensus 190 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-------~~~~~---~~~~~~~~~~~~ 259 (312)
T 2iwi_A 190 LHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD-------QEILE---AELHFPAHVSPD 259 (312)
T ss_dssp CCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-------HHHHH---TCCCCCTTSCHH
T ss_pred cccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh-------HHHhh---hccCCcccCCHH
Confidence 65433 33468999999999874444456899999999999999999998642 11111 112233456678
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 005999 622 LTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 622 l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
+.+++.+||+.||++|||+.|+++
T Consensus 260 ~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 260 CCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 999999999999999999999987
No 243
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.7e-37 Score=335.73 Aligned_cols=241 Identities=22% Similarity=0.308 Sum_probs=183.9
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+.||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +||||+++++++.+++..++||||+. |+
T Consensus 21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gs 94 (434)
T 2rio_A 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LN 94 (434)
T ss_dssp EEEEECSTTCEEEEEESSSSEEEEEEEEGGG-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EE
T ss_pred CeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CC
Confidence 5799999999988777789999999986432 34567899999876 89999999999999999999999996 59
Q ss_pred HHHHHhcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCC-------------CceEEeecc
Q 005999 474 LFNLIHGSRSIRA--KPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGAD-------------FEARLTDYC 538 (665)
Q Consensus 474 L~~~l~~~~~~~~--~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~-------------~~~kl~Dfg 538 (665)
|.+++........ ...++..++.++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||
T Consensus 95 L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG 173 (434)
T 2rio_A 95 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173 (434)
T ss_dssp HHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred HHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence 9999985432111 11133346789999999999999999 9999999999999754 489999999
Q ss_pred cccccCCCC-------CCCCCCCcccCCccccC------CCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHH
Q 005999 539 LSVLSDSSS-------VEDPDTVAYKAPEIRKS------SRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEW 604 (665)
Q Consensus 539 l~~~~~~~~-------~~~~gt~~y~aPE~~~~------~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~ 604 (665)
++....... ....||+.|+|||++.. ...++.++|||||||++|||++ |+.||..... .....
T Consensus 174 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~---~~~~i 250 (434)
T 2rio_A 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS---RESNI 250 (434)
T ss_dssp TCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT---HHHHH
T ss_pred cceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh---hHHHH
Confidence 997765432 12358999999999863 2568999999999999999999 9999975322 11222
Q ss_pred HHhhccCC----CchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 605 VRTMRVDD----GREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 605 ~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
+....... ......+..+.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 251 IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 22111111 112345678999999999999999999999986
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=327.96 Aligned_cols=237 Identities=19% Similarity=0.279 Sum_probs=181.4
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
++||+|+||+||.....+++.||||++...... .+.+|+++++++ +||||+++++++.+....++||||+. |+
T Consensus 30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~-----~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~ 103 (432)
T 3p23_A 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS-----FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-AT 103 (432)
T ss_dssp EEEEECGGGCEEEEEESSSSEEEEEEECTTTEE-----ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EE
T ss_pred CeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH-----HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CC
Confidence 579999999977666678889999999654321 246789999988 89999999999999999999999996 59
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCC-----CCceEEeecccccccCCC--
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA-----DFEARLTDYCLSVLSDSS-- 546 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~-----~~~~kl~Dfgl~~~~~~~-- 546 (665)
|.+++.... ..+.+..++.++.||+.||+|||+.+ |+||||||+|||++. ...+||+|||++......
T Consensus 104 L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 104 LQEYVEQKD----FAHLGLEPITLLQQTTSGLAHLHSLN-IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp HHHHHHSSS----CCCCSSCHHHHHHHHHHHHHHHHHTT-CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred HHHHHHhcC----CCccchhHHHHHHHHHHHHHHHHHCc-CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 999997532 23444456789999999999999999 999999999999953 336889999999766432
Q ss_pred ----CCCCCCCCcccCCccccC--CCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCCCccHHHHHHhh-ccCC-Cchhh
Q 005999 547 ----SVEDPDTVAYKAPEIRKS--SRRATSKSDVYAFGVLLLELLT-GKHPSQHPYLAPPDMLEWVRTM-RVDD-GREEN 617 (665)
Q Consensus 547 ----~~~~~gt~~y~aPE~~~~--~~~~~~k~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~-~~~~-~~~~~ 617 (665)
.....||+.|+|||++.. ...++.++|||||||++|||++ |+.||.... .......... .... .....
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~ 255 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL---QRQANILLGACSLDCLHPEKH 255 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTT---THHHHHHTTCCCCTTSCTTCH
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhh---HHHHHHHhccCCccccCcccc
Confidence 123458999999999863 3457789999999999999999 999986421 1111111111 1111 12234
Q ss_pred hHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 618 RLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 618 ~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
....+.+++.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 256 EDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 4566889999999999999999999984
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.9e-36 Score=307.99 Aligned_cols=226 Identities=14% Similarity=0.118 Sum_probs=181.0
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCch-hhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKTA-DTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.||+|+||.||+|... +++.||+|++...... ....+.+.+|+.++.+++||||+++++++.+++..++||||++|+
T Consensus 37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~ 116 (286)
T 3uqc_A 37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGG 116 (286)
T ss_dssp EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEE
T ss_pred EEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCC
Confidence 57999999999999975 4889999999766443 344577899999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCCCCCCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSVEDPD 552 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~g 552 (665)
+|.+++.. . ....++.+++.|++.||+|||+.+ |+||||||+|||++.++.+||++++
T Consensus 117 ~L~~~l~~------~-~~~~~~~~i~~ql~~aL~~lH~~g-ivH~Dikp~NIll~~~g~~kl~~~~-------------- 174 (286)
T 3uqc_A 117 SLQEVADT------S-PSPVGAIRAMQSLAAAADAAHRAG-VALSIDHPSRVRVSIDGDVVLAYPA-------------- 174 (286)
T ss_dssp EHHHHHTT------C-CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEETTSCEEECSCC--------------
T ss_pred CHHHHHhc------C-CChHHHHHHHHHHHHHHHHHHHCC-CccCCCCcccEEEcCCCCEEEEecc--------------
Confidence 99999853 1 345578889999999999999999 9999999999999999999998443
Q ss_pred CCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCC----CchhhhHHHHHHHHHH
Q 005999 553 TVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDD----GREENRLGMLTEVASV 628 (665)
Q Consensus 553 t~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~ 628 (665)
|++ .++.++|||||||++|||+||+.||........ +........... ......+..+.+++.+
T Consensus 175 ---~~~--------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 242 (286)
T 3uqc_A 175 ---TMP--------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-LAPAERDTAGQPIEPADIDRDIPFQISAVAAR 242 (286)
T ss_dssp ---CCT--------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-SEECCBCTTSCBCCHHHHCTTSCHHHHHHHHH
T ss_pred ---ccC--------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-hHHHHHHhccCCCChhhcccCCCHHHHHHHHH
Confidence 333 367899999999999999999999986432110 000000000000 1123456779999999
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHhhhc
Q 005999 629 CSLKSPEQRPAMWQVLKMIQEIKESVM 655 (665)
Q Consensus 629 cl~~dP~~RPt~~evl~~L~~~~~~~~ 655 (665)
||+.||++| |+.|+++.|+.+.....
T Consensus 243 ~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 243 SVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp HHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred HcccCCccC-CHHHHHHHHHHHhccCC
Confidence 999999999 99999999999876543
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1e-35 Score=341.51 Aligned_cols=237 Identities=18% Similarity=0.227 Sum_probs=192.4
Q ss_pred hHhCcccceEEEEEEEC--CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCe-----EEEEEE
Q 005999 395 ELLGRGSIGTTYKAVLD--NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGE-----RLVIYD 467 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-----~~lv~e 467 (665)
+.||+|+||.||+|... +++.||||++..... ....+.+.+|++++++++||||+++++++...+. .|+|||
T Consensus 86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E 164 (681)
T 2pzi_A 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD-AEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVME 164 (681)
T ss_dssp EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCC-HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCC-HHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEE
Confidence 57999999999999975 588999999875433 3455678999999999999999999999987665 799999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC
Q 005999 468 YQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 547 (665)
|+++++|.+++.. .+++..++.++.||+.||+|||+.+ |+||||||+|||++.+ .+||+|||++......
T Consensus 165 ~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~g-iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~- 234 (681)
T 2pzi_A 165 YVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIG-LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF- 234 (681)
T ss_dssp CCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSS-CEEECCCTTCEETTCC-
T ss_pred eCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCC-CeecccChHHeEEeCC-cEEEEecccchhcccC-
Confidence 9999999987652 5899999999999999999999999 9999999999999986 9999999999876554
Q ss_pred CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHhhccCCCchhhhHHHHHHHHH
Q 005999 548 VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRTMRVDDGREENRLGMLTEVAS 627 (665)
Q Consensus 548 ~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 627 (665)
....||+.|+|||++.. .++.++|||||||++|||++|..||........ .........+..+.+++.
T Consensus 235 ~~~~gt~~y~aPE~~~~--~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------~~~~~~~~~~~~l~~li~ 302 (681)
T 2pzi_A 235 GYLYGTPGFQAPEIVRT--GPTVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------PEDDPVLKTYDSYGRLLR 302 (681)
T ss_dssp SCCCCCTTTSCTTHHHH--CSCHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------CTTCHHHHHCHHHHHHHH
T ss_pred CccCCCccccCHHHHcC--CCCCceehhhhHHHHHHHHhCCCCCcccccccc----------cccccccccCHHHHHHHh
Confidence 34469999999999873 358899999999999999999998765321110 011112233467899999
Q ss_pred HcccCCCCCCC-CHHHHHHHHHHHHhhh
Q 005999 628 VCSLKSPEQRP-AMWQVLKMIQEIKESV 654 (665)
Q Consensus 628 ~cl~~dP~~RP-t~~evl~~L~~~~~~~ 654 (665)
+||+.||++|| +++++.+.|..+....
T Consensus 303 ~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 330 (681)
T 2pzi_A 303 RAIDPDPRQRFTTAEEMSAQLTGVLREV 330 (681)
T ss_dssp HHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred hhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence 99999999999 5777777777765443
No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=3.9e-36 Score=336.27 Aligned_cols=251 Identities=22% Similarity=0.314 Sum_probs=198.6
Q ss_pred HhHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEe------CCeEEEEE
Q 005999 394 AELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA------KGERLVIY 466 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~~~lv~ 466 (665)
.+.||+|+||.||+|.. .++..||||++..... ....+.+.+|++++++++||||+++++++.. .+..++||
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~-~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVm 97 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS-PKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAM 97 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCC-HHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCC-HHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEE
Confidence 36799999999999986 4688999999876533 3456778999999999999999999999765 66789999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCc---eEEeeccccccc
Q 005999 467 DYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFE---ARLTDYCLSVLS 543 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~---~kl~Dfgl~~~~ 543 (665)
||+++|+|.+++.... ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++...
T Consensus 98 Ey~~ggsL~~~L~~~~--~~~~lse~~i~~I~~QLl~aL~yLHs~g-IVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~ 174 (676)
T 3qa8_A 98 EYCEGGDLRKYLNQFE--NCCGLKEGPIRTLLSDISSALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL 174 (676)
T ss_dssp ECCSSCBHHHHHHSSS--CTTCCCSSHHHHHHHHHHHHHHHHHHTT-BCCCCCCSTTEEEECCSSSCEEEECSCCCCCBT
T ss_pred EeCCCCCHHHHHHhcc--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEeecCCCceeEEEccccccccc
Confidence 9999999999998532 2345888999999999999999999999 999999999999997664 999999999776
Q ss_pred CCCC--CCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHHh---------h----
Q 005999 544 DSSS--VEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPPDMLEWVRT---------M---- 608 (665)
Q Consensus 544 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~---------~---- 608 (665)
.... ....+|+.|+|||++. +..++.++|||||||++|||++|+.||.... ....|... .
T Consensus 175 ~~~~~~~~~~gt~~Y~APE~l~-~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~~~i~~~~~~~~~~~~~ 249 (676)
T 3qa8_A 175 DQGELCTEFVGTLQYLAPELLE-QKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVREKSNEHIVVYDD 249 (676)
T ss_dssp TSCCCCCCCCSCCTTCSSCSSC-CSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSSTTCC------CCSCCC
T ss_pred ccccccccccCCcccCChHHhc-cCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhhhhhhcccchhhhhhhh
Confidence 5433 3346899999999987 6789999999999999999999999996421 00110000 0
Q ss_pred -----------ccCCCchhhhHHHHHHHHHHcccCCCCCCCCHHH-----HHHHHHHHHhh
Q 005999 609 -----------RVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQ-----VLKMIQEIKES 653 (665)
Q Consensus 609 -----------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e-----vl~~L~~~~~~ 653 (665)
..........+..+.+++.+||+.||++|||+.| ..+.++.+.+.
T Consensus 250 l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 250 LTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 0000123446788999999999999999999988 45666666553
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=3.8e-35 Score=302.85 Aligned_cols=221 Identities=16% Similarity=0.248 Sum_probs=174.7
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCchhhHHHHHHHHHHHH-hCCCCCCeeeeeEEEEe----CCeEEEEEEe
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKTADTSAEAFEQHMEAV-GGLSHPNLVPIRAYFQA----KGERLVIYDY 468 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~~lv~e~ 468 (665)
+.||+|+||.||+|.. .+++.||+|++... ..+.+|++++ +.++||||+++++++.. ....++||||
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~ 96 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC 96 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEee
Confidence 5699999999999996 57889999998642 2456777777 55699999999999987 6778999999
Q ss_pred cCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCC---CCceEEeecccccccCC
Q 005999 469 QPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGA---DFEARLTDYCLSVLSDS 545 (665)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~---~~~~kl~Dfgl~~~~~~ 545 (665)
+++|+|.+++... ....+++..++.++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++....
T Consensus 97 ~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~- 171 (299)
T 3m2w_A 97 LDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT- 171 (299)
T ss_dssp CCSCBHHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-
T ss_pred cCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEecCCCCCcEEEeccccccccc-
Confidence 9999999999853 2346999999999999999999999999 999999999999998 7899999999875432
Q ss_pred CCCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCCCc--cHHHHHHhhccCCC--chhhhHHH
Q 005999 546 SSVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPYLAPP--DMLEWVRTMRVDDG--REENRLGM 621 (665)
Q Consensus 546 ~~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~ 621 (665)
+..++.++|||||||++|||++|+.||........ .....+........ .....+..
T Consensus 172 -------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (299)
T 3m2w_A 172 -------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 232 (299)
T ss_dssp -------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHH
T ss_pred -------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHH
Confidence 23477899999999999999999999965321110 00000000000000 11345778
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHH
Q 005999 622 LTEVASVCSLKSPEQRPAMWQVLKM 646 (665)
Q Consensus 622 l~~li~~cl~~dP~~RPt~~evl~~ 646 (665)
+.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 233 VKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHcccChhhCCCHHHHhcC
Confidence 9999999999999999999999973
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-35 Score=320.96 Aligned_cols=240 Identities=15% Similarity=0.083 Sum_probs=178.4
Q ss_pred hHhCcccceEEEEEEE-CCeEEEEEEEecCCCc-hhhHHHHHHHHHHHHhCCCC-CCee---------e-----------
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLSH-PNLV---------P----------- 451 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h-~niv---------~----------- 451 (665)
++||+|+||+||+|.. .+++.||||++..... .....+.+++|+.+++.++| +|.. .
T Consensus 84 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (413)
T 3dzo_A 84 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK 163 (413)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC--
T ss_pred cccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCC
Confidence 5799999999999995 4788999999874432 22335678999999999987 3211 1
Q ss_pred -eeEEEEe-----CCeEEEEEEecCCCCHHHHHhcCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCc
Q 005999 452 -IRAYFQA-----KGERLVIYDYQPNGSLFNLIHGSR--SIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSN 523 (665)
Q Consensus 452 -l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~N 523 (665)
+..++.. ....+++|+++ +++|.+++.... ......+++..++.++.||+.||+|||+.+ |+||||||+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-iiHrDiKp~N 241 (413)
T 3dzo_A 164 KMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTYLRPVD 241 (413)
T ss_dssp -------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGG
T ss_pred ccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcccce
Confidence 1111111 12356666655 679999884210 112456888899999999999999999999 9999999999
Q ss_pred eEeCCCCceEEeecccccccCCCCCCCCCCCcccCCcccc---------CCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 005999 524 VLLGADFEARLTDYCLSVLSDSSSVEDPDTVAYKAPEIRK---------SSRRATSKSDVYAFGVLLLELLTGKHPSQHP 594 (665)
Q Consensus 524 ill~~~~~~kl~Dfgl~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~k~DvwSlGvvl~elltg~~P~~~~ 594 (665)
||++.++.+||+|||++...........| +.|+|||++. ....++.++|||||||++|||++|+.||...
T Consensus 242 ILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~ 320 (413)
T 3dzo_A 242 IVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDD 320 (413)
T ss_dssp EEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTT
T ss_pred EEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 99999999999999999876655555567 9999999983 2456888999999999999999999999763
Q ss_pred CCCCccHHHHHHhhccCCCchhhhHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005999 595 YLAPPDMLEWVRTMRVDDGREENRLGMLTEVASVCSLKSPEQRPAMWQVLK 645 (665)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 645 (665)
.... ... .... .....+..+.+++.+||+.||++||++.|+++
T Consensus 321 ~~~~--~~~---~~~~---~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 321 AALG--GSE---WIFR---SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp GGGS--CSG---GGGS---SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred chhh--hHH---HHHh---hcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 2111 100 0111 12245677999999999999999999888854
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.4e-35 Score=307.58 Aligned_cols=236 Identities=14% Similarity=0.143 Sum_probs=179.7
Q ss_pred HHHHhHhCcccceEEEEEEECCeEEEEEEEecCCCc------hhhHHHHHHHHHHHHhCCC---------CCCeeeeeEE
Q 005999 391 RASAELLGRGSIGTTYKAVLDNHLIVTVKRFDANKT------ADTSAEAFEQHMEAVGGLS---------HPNLVPIRAY 455 (665)
Q Consensus 391 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~---------h~niv~l~~~ 455 (665)
+...+.||+|+||.||+|.. +++.||||++..... .....+.+.+|++++++++ ||||+++.+.
T Consensus 22 y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~ 100 (336)
T 2vuw_A 22 LQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSV 100 (336)
T ss_dssp HHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEE
T ss_pred chheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcce
Confidence 34457899999999999988 678999999976532 1233467888888888775 7777777766
Q ss_pred EE------------------------------eCCeEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHH
Q 005999 456 FQ------------------------------AKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGL 505 (665)
Q Consensus 456 ~~------------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L 505 (665)
+. ..+..++||||+++|++.+.+.. ..+++..++.++.||+.||
T Consensus 101 ~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 101 HCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHHHH
T ss_pred eEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHHHH
Confidence 43 26789999999999987776642 4589999999999999999
Q ss_pred HHHH-hCCCeeccCCCCCceEeCCCC--------------------ceEEeecccccccCCCCCCCCCCCcccCCccccC
Q 005999 506 AYIH-RASWLIHGNLKSSNVLLGADF--------------------EARLTDYCLSVLSDSSSVEDPDTVAYKAPEIRKS 564 (665)
Q Consensus 506 ~yLH-~~~~iiH~Dlk~~Nill~~~~--------------------~~kl~Dfgl~~~~~~~~~~~~gt~~y~aPE~~~~ 564 (665)
+||| +.+ |+||||||+|||++.++ .+||+|||+++..... ...||+.|+|||++.
T Consensus 175 ~~lH~~~~-ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~--~~~gt~~y~aPE~~~- 250 (336)
T 2vuw_A 175 AVAEASLR-FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG--IVVFCDVSMDEDLFT- 250 (336)
T ss_dssp HHHHHHHC-CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT--EEECCCCTTCSGGGC-
T ss_pred HHHHHhCC-EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC--cEEEeecccChhhhc-
Confidence 9999 888 99999999999999887 8999999999876543 236899999999987
Q ss_pred CCCCCCcchHHHHHHH-HHHHHhCCCCCCCCCCCCccHHHHHH-hhccCC----CchhhhHHHHHHHHHHcccCCCCCCC
Q 005999 565 SRRATSKSDVYAFGVL-LLELLTGKHPSQHPYLAPPDMLEWVR-TMRVDD----GREENRLGMLTEVASVCSLKSPEQRP 638 (665)
Q Consensus 565 ~~~~~~k~DvwSlGvv-l~elltg~~P~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RP 638 (665)
+.. +.++||||+|++ .+++++|..||..... .......+. ...... ......+..+.+|+.+||+.|
T Consensus 251 g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d----- 323 (336)
T 2vuw_A 251 GDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW-LHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS----- 323 (336)
T ss_dssp CCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH-HHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----
T ss_pred CCC-ccceehhhhhCCCCcccccccCCCcchhh-hhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----
Confidence 333 889999998777 7778889998743100 000111111 111111 123456788999999999976
Q ss_pred CHHHHH
Q 005999 639 AMWQVL 644 (665)
Q Consensus 639 t~~evl 644 (665)
|+.|++
T Consensus 324 sa~e~l 329 (336)
T 2vuw_A 324 SATDLL 329 (336)
T ss_dssp SHHHHH
T ss_pred CHHHHH
Confidence 999888
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.4e-29 Score=282.79 Aligned_cols=183 Identities=12% Similarity=0.049 Sum_probs=128.8
Q ss_pred hCcccceEEEEEE-ECCeEEEEEEEecCCCc--------hhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEE
Q 005999 397 LGRGSIGTTYKAV-LDNHLIVTVKRFDANKT--------ADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIY 466 (665)
Q Consensus 397 lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--------~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 466 (665)
.+.|++|.++.++ +.-|+.+++|++..... .+...++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 5667777666655 44578899999865421 123456799999999999 8999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCC
Q 005999 467 DYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSS 546 (665)
Q Consensus 467 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~ 546 (665)
||++|++|.++|.. ..+++.. +|+.||+.||+|+|+++ ||||||||+|||+++++++||+|||+++.....
T Consensus 322 Eyv~G~~L~d~i~~-----~~~l~~~---~I~~QIl~AL~ylH~~G-IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAA-----GEEIDRE---KILGSLLRSLAALEKQG-FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHT-----TCCCCHH---HHHHHHHHHHHHHHHTT-CEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHh-----CCCCCHH---HHHHHHHHHHHHHHHCC-ceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 99999999999984 3456654 58899999999999999 999999999999999999999999999766543
Q ss_pred CC---CCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCC
Q 005999 547 SV---EDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590 (665)
Q Consensus 547 ~~---~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P 590 (665)
.. ...||+.|||||++. +.+..++|+||+|++++++.++..+
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~--g~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFA--ENKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC-------------------CCCCTTHHH
T ss_pred CccccCceechhhccHHHhC--CCCCCcccccccccchhhhccccch
Confidence 32 224899999999986 3567789999999998877665443
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.95 E-value=4e-28 Score=251.78 Aligned_cols=194 Identities=31% Similarity=0.508 Sum_probs=172.2
Q ss_pred CCCHHHHHHHHHHHhcCCCCCCccccCCCCCCCcc--ccceeecC----CCEEEEEecCCCCcc--cCCccccCCCCCCc
Q 005999 31 SLLPSDAVSLLSFKSKADSENKLLYALNERFDYCQ--WQGVKCAQ----GRVVRFVLQSFGLRG--TFPPNTLTRLDQLR 102 (665)
Q Consensus 31 ~~~~~~~~~Ll~~k~~~~~~~~~~~~~~~~~~~C~--w~gv~C~~----~~v~~l~l~~~~l~g--~l~~~~~~~l~~L~ 102 (665)
.|.++|++||++||+++.++. ...+|+.+.+||. |.||+|+. ++|+.|+|++|++.| .+|+ .|.++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCCCC
Confidence 588999999999999996544 3334555579998 99999985 799999999999999 8887 899999999
Q ss_pred EEEccC-CcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccc
Q 005999 103 VLSLHN-NSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWN 180 (665)
Q Consensus 103 ~L~L~~-N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 180 (665)
+|+|++ |++.+.+| .|+++++|++|+|++|++++.+|..|.++++|++|+|++|+|++.+|..+..+++|+.|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 99999888 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCC--CCC-CcceEecccccccccCCCCCcccCcCcccccCCC
Q 005999 181 RFSGTVPPL--NQP-FLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNP 226 (665)
Q Consensus 181 ~l~~~~~~~--~~~-~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 226 (665)
++++.+|.. .++ .|+.|++++|++++.+|......+|..+++++|.
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~ 208 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNM 208 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSE
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCc
Confidence 999888865 666 8999999999999988854332348888888874
No 253
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.93 E-value=4.5e-26 Score=265.14 Aligned_cols=195 Identities=29% Similarity=0.328 Sum_probs=144.3
Q ss_pred CCCHHHHHHHHHHHhcCCCCCCccccCCCCCCCccccceeecCCCEEEEEecCCCCccc---CCc---------------
Q 005999 31 SLLPSDAVSLLSFKSKADSENKLLYALNERFDYCQWQGVKCAQGRVVRFVLQSFGLRGT---FPP--------------- 92 (665)
Q Consensus 31 ~~~~~~~~~Ll~~k~~~~~~~~~~~~~~~~~~~C~w~gv~C~~~~v~~l~l~~~~l~g~---l~~--------------- 92 (665)
...++|++||++||+++.++. ...+|..++|||+|.||+|+.++|+.|+|+++++.|. +|+
T Consensus 8 ~~~~~~~~all~~k~~~~~~~-~l~~W~~~~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~ 86 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLPDKN-LLPDWSSNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSN 86 (768)
T ss_dssp CCHHHHHHHHHHHHTTCSCTT-SSTTCCTTSCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTT
T ss_pred cCCHHHHHHHHHHHhhCCCcc-cccCCCCCCCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccccCCcC
Confidence 446789999999999987655 5445656689999999999999999999999999987 654
Q ss_pred -------cccCCCCCCcEEEccCCcCccCCC---CCCCCCCCCEEEccCcccCCcCcccc-cCCCCCCEEEeeccccccc
Q 005999 93 -------NTLTRLDQLRVLSLHNNSLTGPIP---DLSSLINLKSLSLSRNFFSGAFPLSI-LSLHRLTILDLSYNNLTGL 161 (665)
Q Consensus 93 -------~~~~~l~~L~~L~L~~N~l~~~~p---~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~ 161 (665)
..|+++++|++|+|++|.++|.+| .++++++|++|+|++|.+++.+|..+ .++++|++|||++|++++.
T Consensus 87 ~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 166 (768)
T 3rgz_A 87 SHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGA 166 (768)
T ss_dssp SCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEE
T ss_pred CCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCc
Confidence 256666677777777777766444 46666777777777777766666655 5666777777777777666
Q ss_pred CCcc---ccCCCccCeeecccccccccCCCCCCCCcceEecccccccccCCCCCcccCcCcccccCCC
Q 005999 162 IPVN---LTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNP 226 (665)
Q Consensus 162 ~p~~---~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 226 (665)
.|.. +.++++|+.|++++|++++.++...+++|++|++++|++++.+|....+.+|..+++++|.
T Consensus 167 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~ 234 (768)
T 3rgz_A 167 NVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNK 234 (768)
T ss_dssp THHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSC
T ss_pred CChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCc
Confidence 6655 5667777777777777776666667777888888888888777766667777777777764
No 254
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=6.8e-26 Score=251.60 Aligned_cols=182 Identities=15% Similarity=0.157 Sum_probs=143.8
Q ss_pred HhHhCcccceEEEEEEECCeEEEEEEEecCCCchh------hHHHHHHHHHHHHhCCCCCCeeeeeEEEEeCCeEEEEEE
Q 005999 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTAD------TSAEAFEQHMEAVGGLSHPNLVPIRAYFQAKGERLVIYD 467 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 467 (665)
.+.||+|+||.||++.. .+..+++|+........ ...+.+.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 46899999999999954 45677888765432211 124568999999999999999977777777788899999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecccccccCCCC
Q 005999 468 YQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSS 547 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~ 547 (665)
|+++++|.++++. +..++.|++.||+|||+++ |+||||||+|||++. ++||+|||+++......
T Consensus 420 ~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~g-IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 420 YINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKND-VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp CCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTT-EECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred CCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCc-CccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 9999999999863 4579999999999999999 999999999999999 99999999998776532
Q ss_pred ----------CCCCCCCcccCCccccC-CCCCCCcchHHHHHHHHHHHHhCCCCCC
Q 005999 548 ----------VEDPDTVAYKAPEIRKS-SRRATSKSDVYAFGVLLLELLTGKHPSQ 592 (665)
Q Consensus 548 ----------~~~~gt~~y~aPE~~~~-~~~~~~k~DvwSlGvvl~elltg~~P~~ 592 (665)
....||+.|||||++.. ...|+..+|+|+..+-.++-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 12247999999999862 1457888999999999999988887764
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.91 E-value=6.8e-25 Score=249.57 Aligned_cols=193 Identities=21% Similarity=0.258 Sum_probs=160.4
Q ss_pred CCHHHHHHHHHHHhcCCCCCCc--------cccCCCCCCCccc---cceeecC-CCEEEEEecCCCCcccCCccccCCCC
Q 005999 32 LLPSDAVSLLSFKSKADSENKL--------LYALNERFDYCQW---QGVKCAQ-GRVVRFVLQSFGLRGTFPPNTLTRLD 99 (665)
Q Consensus 32 ~~~~~~~~Ll~~k~~~~~~~~~--------~~~~~~~~~~C~w---~gv~C~~-~~v~~l~l~~~~l~g~l~~~~~~~l~ 99 (665)
....|+.||.+|+.++..+++. ..+|+.+.+||.| .||+|+. ++|+.|+|+++++.|.+|+ .|++|+
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~-~l~~L~ 105 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPD-AIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECG-GGGGCT
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCCh-HHhcCc
Confidence 4457999999999988654322 1246666899999 9999975 7999999999999999997 899999
Q ss_pred CCcEEEccCCc---------------------------------------------------------------------
Q 005999 100 QLRVLSLHNNS--------------------------------------------------------------------- 110 (665)
Q Consensus 100 ~L~~L~L~~N~--------------------------------------------------------------------- 110 (665)
+|+.|+|++|+
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 185 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred cceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhh
Confidence 99999999884
Q ss_pred ---------CccCCCCCCCCCCCCEEEccCcccCCc-----------------Cccccc--CCCCCCEEEeecccccccC
Q 005999 111 ---------LTGPIPDLSSLINLKSLSLSRNFFSGA-----------------FPLSIL--SLHRLTILDLSYNNLTGLI 162 (665)
Q Consensus 111 ---------l~~~~p~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~L~~N~l~~~~ 162 (665)
|+|++++|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|++.|.+
T Consensus 186 l~l~~~~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 186 TQIGQLSNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp TTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred hhhccccCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 446333799999999999999999986 999999 9999999999999999999
Q ss_pred CccccCCCccCeeeccccc-ccc-cCCCC--CC------CCcceEecccccccccCCC---CCcccCcCcccccCCC
Q 005999 163 PVNLTALDRLYSLKLEWNR-FSG-TVPPL--NQ------PFLVVFNVSGNNLTGQVPE---TPTLLKFDASSFSMNP 226 (665)
Q Consensus 163 p~~~~~l~~L~~L~l~~N~-l~~-~~~~~--~~------~~L~~l~l~~N~l~~~~p~---~~~l~~l~~~~~~~n~ 226 (665)
|..++++++|+.|+|++|+ ++| .+|.. .+ ++|+.|++++|+++ .+|. ...+.+|..+++++|.
T Consensus 266 p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~ 341 (636)
T 4eco_A 266 PTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQ 341 (636)
T ss_dssp CTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCC
T ss_pred hHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCc
Confidence 9999999999999999998 988 55542 33 77888888888887 5554 4566677777777764
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=9.2e-25 Score=253.52 Aligned_cols=192 Identities=23% Similarity=0.312 Sum_probs=164.1
Q ss_pred CCCHHHHHHHHHHHhcCCCCCCccccCCC---CCCC--ccc------------cceeecC-CCEEEEEecCCCCcccCCc
Q 005999 31 SLLPSDAVSLLSFKSKADSENKLLYALNE---RFDY--CQW------------QGVKCAQ-GRVVRFVLQSFGLRGTFPP 92 (665)
Q Consensus 31 ~~~~~~~~~Ll~~k~~~~~~~~~~~~~~~---~~~~--C~w------------~gv~C~~-~~v~~l~l~~~~l~g~l~~ 92 (665)
.+..+|+.||++||+++.++ .|+.+. ..+| |.| .||+|+. ++|+.|+|++++|.|.+|+
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECG
T ss_pred ccchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCch
Confidence 45567999999999999654 454332 2355 999 9999984 8999999999999999998
Q ss_pred cccCCCCCCcEEEc-cCCcCccC---------------------------------------------------------
Q 005999 93 NTLTRLDQLRVLSL-HNNSLTGP--------------------------------------------------------- 114 (665)
Q Consensus 93 ~~~~~l~~L~~L~L-~~N~l~~~--------------------------------------------------------- 114 (665)
.|++|++|+.|+| ++|.++|.
T Consensus 342 -~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 342 -AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp -GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred -HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 8999999999999 77765444
Q ss_pred -------------------CC-CCCCCCCCCEEEccCcccCC-----------------cCccccc--CCCCCCEEEeec
Q 005999 115 -------------------IP-DLSSLINLKSLSLSRNFFSG-----------------AFPLSIL--SLHRLTILDLSY 155 (665)
Q Consensus 115 -------------------~p-~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~L~~L~L~~ 155 (665)
+| .|++|++|+.|+|++|+|+| .+|..++ ++++|+.|+|++
T Consensus 421 ~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~ 500 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYN 500 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEES
T ss_pred cccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcC
Confidence 55 78999999999999999998 4999988 999999999999
Q ss_pred ccccccCCccccCCCccCeeeccccc-ccc-cCCCC---------CCCCcceEecccccccccCCC---CCcccCcCccc
Q 005999 156 NNLTGLIPVNLTALDRLYSLKLEWNR-FSG-TVPPL---------NQPFLVVFNVSGNNLTGQVPE---TPTLLKFDASS 221 (665)
Q Consensus 156 N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~~~~---------~~~~L~~l~l~~N~l~~~~p~---~~~l~~l~~~~ 221 (665)
|++.+.+|..|+++++|+.|+|++|+ ++| .+|.. .+++|+.|+|++|+|+ .+|. ...+.+|..++
T Consensus 501 N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~ 579 (876)
T 4ecn_A 501 CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLD 579 (876)
T ss_dssp CTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEE
T ss_pred CCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEE
Confidence 99999999999999999999999998 998 55532 3458999999999999 6775 56788888899
Q ss_pred ccCCCC
Q 005999 222 FSMNPN 227 (665)
Q Consensus 222 ~~~n~~ 227 (665)
+++|..
T Consensus 580 Ls~N~l 585 (876)
T 4ecn_A 580 CVHNKV 585 (876)
T ss_dssp CTTSCC
T ss_pred CCCCCc
Confidence 988854
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.90 E-value=2.1e-24 Score=225.13 Aligned_cols=199 Identities=22% Similarity=0.268 Sum_probs=168.0
Q ss_pred CCCCCCCHHHHHHHHHHHhcCCCCC-Cc--cccC--CCCCCCccccceeecC----------CCEEEEEecCCCCcccCC
Q 005999 27 PITNSLLPSDAVSLLSFKSKADSEN-KL--LYAL--NERFDYCQWQGVKCAQ----------GRVVRFVLQSFGLRGTFP 91 (665)
Q Consensus 27 ~~~~~~~~~~~~~Ll~~k~~~~~~~-~~--~~~~--~~~~~~C~w~gv~C~~----------~~v~~l~l~~~~l~g~l~ 91 (665)
+....+..+|+.||++||..+..++ .. .|.. ....++|.|.|+.|.. .+|+.|+|++|+++ .+|
T Consensus 19 ~~~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp 97 (328)
T 4fcg_A 19 FQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFP 97 (328)
T ss_dssp CC--CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCC
T ss_pred eeccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcC
Confidence 3345677789999999999874322 22 4420 3357899999999952 79999999999999 898
Q ss_pred ccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccccccCCccccC---
Q 005999 92 PNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTA--- 168 (665)
Q Consensus 92 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--- 168 (665)
+ .+.++++|++|+|++|.|+.++..++++++|++|+|++|+|+ .+|..|+++++|++|+|++|++.+.+|..+..
T Consensus 98 ~-~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~ 175 (328)
T 4fcg_A 98 D-QAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDA 175 (328)
T ss_dssp S-CGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-
T ss_pred h-hhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccc
Confidence 7 688999999999999999954448999999999999999999 89999999999999999999999999988765
Q ss_pred ------CCccCeeecccccccccCCCC-CCCCcceEecccccccccCCCCCcccCcCcccccCCCCC
Q 005999 169 ------LDRLYSLKLEWNRFSGTVPPL-NQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNPNL 228 (665)
Q Consensus 169 ------l~~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~l 228 (665)
+++|+.|+|++|+++..+..+ .+++|+.|++++|++++.++....+.+|..+++++|...
T Consensus 176 ~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~ 242 (328)
T 4fcg_A 176 SGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTAL 242 (328)
T ss_dssp CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTC
T ss_pred hhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcch
Confidence 999999999999999554444 889999999999999987666677888999999998654
No 258
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.87 E-value=1.5e-22 Score=235.47 Aligned_cols=165 Identities=31% Similarity=0.507 Sum_probs=146.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-C-----------------------------------
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-D----------------------------------- 117 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~----------------------------------- 117 (665)
..++.|+|++|.++|.+|. .++++++|+.|+|++|+++|.+| .
T Consensus 514 ~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (768)
T 3rgz_A 514 ENLAILKLSNNSFSGNIPA-ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592 (768)
T ss_dssp TTCCEEECCSSCCEEECCG-GGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEE
T ss_pred CCCCEEECCCCcccCcCCH-HHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccc
Confidence 4677888888888877776 68888888888888888876655 2
Q ss_pred -----------------------------------CCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccccccC
Q 005999 118 -----------------------------------LSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLI 162 (665)
Q Consensus 118 -----------------------------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 162 (665)
++++++|+.|||++|+|+|.+|..|+++++|+.|+|++|+|+|.+
T Consensus 593 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~i 672 (768)
T 3rgz_A 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 672 (768)
T ss_dssp EEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred ccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCC
Confidence 334577899999999999999999999999999999999999999
Q ss_pred CccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCCCcccCcCcccccCCCCCCCCCCCCCCCCC
Q 005999 163 PVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNPNLCGKVINKACRPR 240 (665)
Q Consensus 163 p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~lc~~~~~~~c~~~ 240 (665)
|..++++++|+.|+|++|+++|.+|.. .++.|++||+++|+|+|.+|....+.++....|.+||++||.++. .|...
T Consensus 673 p~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 673 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred ChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 999999999999999999999999976 889999999999999999999888999999999999999999876 78653
No 259
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=5.3e-22 Score=198.85 Aligned_cols=155 Identities=24% Similarity=0.207 Sum_probs=139.2
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 75 RVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 75 ~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
.++.|+|++|++.+ +++..|.++++|++|+|++|+|++.++ .|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 36 ~l~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 36 DTEKLDLQSTGLAT-LSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEEccCCCcCc-cCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 58899999999995 555589999999999999999999888 6899999999999999999777788899999999999
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCC-CCcccCcCcccccCCCCCCC
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPE-TPTLLKFDASSFSMNPNLCG 230 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~~lc~ 230 (665)
++|+|++..+..|..+++|+.|+|++|+|++.++.. .+++|++|+|++|+|++.++. ...+.+|..+++++|++.|.
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 999999777777899999999999999999988853 789999999999999987763 35678899999999999886
No 260
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=6.2e-21 Score=188.23 Aligned_cols=159 Identities=26% Similarity=0.261 Sum_probs=85.9
Q ss_pred CCCCCccccceeecCCCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCc
Q 005999 59 ERFDYCQWQGVKCAQGRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGA 137 (665)
Q Consensus 59 ~~~~~C~w~gv~C~~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~ 137 (665)
.+.+.|+|.+|.|.. +++. .+|. .+. ++|+.|+|++|+|++.+| .|.++++|+.|+|++|+|++.
T Consensus 14 ~~~~~Cs~~~v~c~~----------~~l~-~ip~-~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i 79 (229)
T 3e6j_A 14 PSQCSCSGTTVDCRS----------KRHA-SVPA-GIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGAL 79 (229)
T ss_dssp CTTCEEETTEEECTT----------SCCS-SCCS-CCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCCEEeCCEeEccC----------CCcC-ccCC-CCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCc
Confidence 347899999999963 3333 3443 121 455555555555555544 455555555555555555533
Q ss_pred CcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC-CCCCcceEecccccccccCCC-CCccc
Q 005999 138 FPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL-NQPFLVVFNVSGNNLTGQVPE-TPTLL 215 (665)
Q Consensus 138 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~l~~~~p~-~~~l~ 215 (665)
.+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+.++... .+++|++|+|++|+|++..+. ...+.
T Consensus 80 ~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 159 (229)
T 3e6j_A 80 PVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLS 159 (229)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCT
T ss_pred ChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCC
Confidence 3334455555555555555555444444555555555555555555443333 455555555555555544332 23344
Q ss_pred CcCcccccCCCCCCCC
Q 005999 216 KFDASSFSMNPNLCGK 231 (665)
Q Consensus 216 ~l~~~~~~~n~~lc~~ 231 (665)
+|..+++.+||+.|.|
T Consensus 160 ~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 160 SLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TCCEEECTTSCBCTTB
T ss_pred CCCEEEeeCCCccCCc
Confidence 5555555555555544
No 261
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.85 E-value=6.1e-21 Score=193.30 Aligned_cols=150 Identities=24% Similarity=0.258 Sum_probs=110.5
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 75 RVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 75 ~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
.++.|+|++|+++ .+++..|.++++|++|+|++|+|+.+++ .|.++++|++|+|++|++++..+..|.++++|+.|+|
T Consensus 38 ~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCS-CCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCC-eeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 4778888888888 5666678889999999999999887777 4678888888888888888655566777888888888
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCC-CCcccCcCcccccCC
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPE-TPTLLKFDASSFSMN 225 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~-~~~l~~l~~~~~~~n 225 (665)
++|++++..|..|..+++|+.|+|++|++++.++.. .+++|+.|++++|++++..+. ...+.+|..+++++|
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNN 191 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCC
Confidence 888887766666777777777777777777766643 566677777777776655443 234555666666655
No 262
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=4.9e-22 Score=202.29 Aligned_cols=141 Identities=16% Similarity=0.203 Sum_probs=114.4
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchh----------------hHHHHHHHHHHHHhCCCCCCeeeeeEEEEe
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTAD----------------TSAEAFEQHMEAVGGLSHPNLVPIRAYFQA 458 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 458 (665)
+.||+|+||.||+|...+++.||+|.++...... .....+.+|++++++++ | +++.+++..
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~ 172 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW 172 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec
Confidence 6799999999999999889999999996543211 23567899999999998 5 666666544
Q ss_pred CCeEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCCceEEeecc
Q 005999 459 KGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYC 538 (665)
Q Consensus 459 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfg 538 (665)
+..++||||++||+|.+ +.. .....++.|++.||+|||+.+ |+||||||+|||++ ++.+||+|||
T Consensus 173 -~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~g-iiHrDlkp~NILl~-~~~vkl~DFG 237 (282)
T 1zar_A 173 -EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVS-EEGIWIIDFP 237 (282)
T ss_dssp -ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEE-TTEEEECCCT
T ss_pred -cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHCC-CEeCCCCHHHEEEE-CCcEEEEECC
Confidence 45699999999999988 431 123469999999999999999 99999999999999 9999999999
Q ss_pred cccccCCCCCCCCCCCcccCCcccc
Q 005999 539 LSVLSDSSSVEDPDTVAYKAPEIRK 563 (665)
Q Consensus 539 l~~~~~~~~~~~~gt~~y~aPE~~~ 563 (665)
++... ..++|||++.
T Consensus 238 ~a~~~----------~~~~a~e~l~ 252 (282)
T 1zar_A 238 QSVEV----------GEEGWREILE 252 (282)
T ss_dssp TCEET----------TSTTHHHHHH
T ss_pred CCeEC----------CCCCHHHHHH
Confidence 98643 3468899764
No 263
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.84 E-value=2.7e-21 Score=200.31 Aligned_cols=161 Identities=32% Similarity=0.497 Sum_probs=114.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCC-CCCEEEccCcccCCcCc------------
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLI-NLKSLSLSRNFFSGAFP------------ 139 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~-~L~~L~Ls~N~l~~~~p------------ 139 (665)
..++.|+|++|.+++.+|. .+..+++|++|+|++|+|++.+| .++.++ +|+.|+|++|++++.+|
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~ 203 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPP-SISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVD 203 (313)
T ss_dssp TTCCEEECCSSEEESCCCG-GGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEE
T ss_pred CCCCEEeCCCCccCCcCCh-HHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEE
Confidence 4677777777777766665 56667777777777777766555 566665 66666666666555544
Q ss_pred -----------ccccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccc
Q 005999 140 -----------LSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTG 206 (665)
Q Consensus 140 -----------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~ 206 (665)
..|.++++|+.|+|++|++++.+|. +..+++|+.|+|++|++++.+|.. .+++|+.|++++|+|+|
T Consensus 204 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 282 (313)
T 1ogq_A 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred CcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccc
Confidence 4455555555566666666544443 566677777777777777766654 67889999999999999
Q ss_pred cCCCCCcccCcCcccccCCCCCCCCCCCCCC
Q 005999 207 QVPETPTLLKFDASSFSMNPNLCGKVINKAC 237 (665)
Q Consensus 207 ~~p~~~~l~~l~~~~~~~n~~lc~~~~~~~c 237 (665)
.+|....+.+|..+++.+|+++||.++. .|
T Consensus 283 ~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 283 EIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp ECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred cCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 9998888899999999999999997765 45
No 264
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=2.7e-20 Score=182.39 Aligned_cols=152 Identities=22% Similarity=0.239 Sum_probs=124.1
Q ss_pred EEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeeccc
Q 005999 79 FVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNN 157 (665)
Q Consensus 79 l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 157 (665)
+++++++|+ .+|. .+. ++|+.|+|++|+|+++++ .|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 16 v~c~~~~l~-~iP~-~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 16 VDCRGKGLT-EIPT-NLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EECTTSCCS-SCCS-SCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEcCCCCcC-cCCC-ccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 445667777 6776 343 688999999999998888 78889999999999999998788889999999999999999
Q ss_pred ccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCC-CCcccCcCcccccCCCCCCCCCCC
Q 005999 158 LTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPE-TPTLLKFDASSFSMNPNLCGKVIN 234 (665)
Q Consensus 158 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~~lc~~~~~ 234 (665)
|+...+..|..+++|+.|+|++|++++.+|.. .+++|+.|+|++|+|++..+. ...+.+|..+++++||+.|+|.+.
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l~ 171 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLK 171 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGGH
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCccH
Confidence 98655556788899999999999998887764 778899999999999877664 355778888899999998887653
No 265
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=1.5e-20 Score=184.26 Aligned_cols=152 Identities=18% Similarity=0.185 Sum_probs=98.4
Q ss_pred EEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC--CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeec
Q 005999 78 RFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP--DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSY 155 (665)
Q Consensus 78 ~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 155 (665)
.+++++|+++ .+|. .+. ..++.|+|++|+|++.++ .|..+++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 15 ~l~~s~n~l~-~iP~-~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLN-KIPE-HIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCS-SCCS-CCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCcc-cCcc-CCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 4555666666 4654 232 345677777777776654 366677777777777777755555677777777777777
Q ss_pred ccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCC-CcccCcCcccccCCCCCCCCC
Q 005999 156 NNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPET-PTLLKFDASSFSMNPNLCGKV 232 (665)
Q Consensus 156 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~-~~l~~l~~~~~~~n~~lc~~~ 232 (665)
|+|++..|..|..+++|+.|+|++|+|++.+|.. .+++|+.|+|++|+|++..|.. ..+.+|..+++++|++.|+|.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 7777666666667777777777777777665543 5666777777777777665532 445666667777777777665
Q ss_pred C
Q 005999 233 I 233 (665)
Q Consensus 233 ~ 233 (665)
+
T Consensus 171 l 171 (220)
T 2v70_A 171 L 171 (220)
T ss_dssp G
T ss_pred h
Confidence 3
No 266
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=7.8e-20 Score=179.11 Aligned_cols=147 Identities=18% Similarity=0.193 Sum_probs=134.3
Q ss_pred CccccceeecC-----------CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEcc
Q 005999 63 YCQWQGVKCAQ-----------GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLS 130 (665)
Q Consensus 63 ~C~w~gv~C~~-----------~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls 130 (665)
-|.|..+.|+. ..++.|+|++|+|++..++..|..+++|+.|+|++|+|+++++ .|.++++|++|+|+
T Consensus 10 ~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 10 RCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred EECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 37899999974 2578999999999966566679999999999999999999998 89999999999999
Q ss_pred CcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccC
Q 005999 131 RNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQV 208 (665)
Q Consensus 131 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~ 208 (665)
+|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++.+|.. .+++|+.|+|++|+|++..
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 99999888888999999999999999999998999999999999999999999997765 7899999999999999876
Q ss_pred C
Q 005999 209 P 209 (665)
Q Consensus 209 p 209 (665)
+
T Consensus 170 ~ 170 (220)
T 2v70_A 170 Y 170 (220)
T ss_dssp G
T ss_pred c
Confidence 5
No 267
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=9.7e-20 Score=176.80 Aligned_cols=147 Identities=22% Similarity=0.234 Sum_probs=114.7
Q ss_pred CCccccceeecC-----------CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEc
Q 005999 62 DYCQWQGVKCAQ-----------GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSL 129 (665)
Q Consensus 62 ~~C~w~gv~C~~-----------~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L 129 (665)
..|.|.+|.|+. .+++.|+|++|+++ .+++..|..+++|+.|+|++|+|++.++ .|..+++|++|+|
T Consensus 5 C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 83 (208)
T 2o6s_A 5 CSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNL 83 (208)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccC-cCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEEC
Confidence 347899999974 25788888888888 5666567888888888888888887776 4678888888888
Q ss_pred cCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEeccccccccc
Q 005999 130 SRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQ 207 (665)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~ 207 (665)
++|+|++..+..|.++++|++|+|++|+|++..+..+..+++|+.|+|++|++++.++.. .+++|+.|++++|.+.+.
T Consensus 84 s~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 163 (208)
T 2o6s_A 84 STNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 163 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC
T ss_pred CCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC
Confidence 888888555556778888888888888888666666788888888888888888777653 677888888888888766
Q ss_pred CC
Q 005999 208 VP 209 (665)
Q Consensus 208 ~p 209 (665)
.|
T Consensus 164 ~~ 165 (208)
T 2o6s_A 164 CP 165 (208)
T ss_dssp TT
T ss_pred CC
Confidence 55
No 268
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.80 E-value=2.5e-19 Score=183.33 Aligned_cols=157 Identities=24% Similarity=0.126 Sum_probs=120.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
.+++.|+|++|+++ .+++ .+.+++|+.|+|++|+|+.++..+..+++|++|+|++|+|++..|..|.++++|+.|+|
T Consensus 55 ~~L~~L~L~~n~l~-~~~~--~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 55 TRLTQLNLDRAELT-KLQV--DGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp TTCCEEECTTSCCC-EEEC--CSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccC-cccC--CCCCCcCCEEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 56777777777777 3443 36777777777777777766557778888888888888888666677888888888888
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCCCcccCcCcccccCCCCCCCC
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNPNLCGK 231 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~lc~~ 231 (665)
++|+|++..+..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|+|+..++....+.+|..+.+.+||+.|+|
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 888888766666778888888888888888777654 678888888888888855555556667888889999999887
Q ss_pred CC
Q 005999 232 VI 233 (665)
Q Consensus 232 ~~ 233 (665)
.+
T Consensus 212 ~~ 213 (290)
T 1p9a_G 212 EI 213 (290)
T ss_dssp GG
T ss_pred cc
Confidence 54
No 269
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=6e-20 Score=194.16 Aligned_cols=169 Identities=22% Similarity=0.229 Sum_probs=145.6
Q ss_pred ccccceeecC-----------CCEEEEEecCCCCcccCCccccC-CCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEcc
Q 005999 64 CQWQGVKCAQ-----------GRVVRFVLQSFGLRGTFPPNTLT-RLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLS 130 (665)
Q Consensus 64 C~w~gv~C~~-----------~~v~~l~l~~~~l~g~l~~~~~~-~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls 130 (665)
|.|..+.|.. ..++.|+|++|+|+ .+++..+. ++++|+.|+|++|+|+++++ .|.++++|++|+|+
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~-~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCC-EECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCC-ccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 6788888864 35889999999999 56666787 99999999999999999998 79999999999999
Q ss_pred CcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC-----CCCCcceEeccccccc
Q 005999 131 RNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL-----NQPFLVVFNVSGNNLT 205 (665)
Q Consensus 131 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-----~~~~L~~l~l~~N~l~ 205 (665)
+|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 99999777778999999999999999999888999999999999999999999877653 4789999999999999
Q ss_pred ccCCCC-CcccC--cCcccccCCCCCCCCCC
Q 005999 206 GQVPET-PTLLK--FDASSFSMNPNLCGKVI 233 (665)
Q Consensus 206 ~~~p~~-~~l~~--l~~~~~~~n~~lc~~~~ 233 (665)
+..+.. ..+.. +..+++.+||+.|+|.+
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l 207 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECDCKL 207 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECCHHH
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCCcCc
Confidence 654321 22333 36789999999999864
No 270
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.80 E-value=4.5e-19 Score=179.71 Aligned_cols=157 Identities=24% Similarity=0.197 Sum_probs=142.6
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEE
Q 005999 73 QGRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTIL 151 (665)
Q Consensus 73 ~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 151 (665)
...++.|+|++|.+.+ ++ .+..+++|++|+|++|++++.++ .|.++++|++|+|++|++++..|..|.++++|++|
T Consensus 62 l~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 138 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHD-IS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138 (272)
T ss_dssp CTTCCEEECTTSCCCC-CG--GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCcEEECCCCCCCC-ch--hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEE
Confidence 4689999999999995 43 69999999999999999999888 58999999999999999997777789999999999
Q ss_pred EeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCC-CcccCcCcccccCCCCC
Q 005999 152 DLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPET-PTLLKFDASSFSMNPNL 228 (665)
Q Consensus 152 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~-~~l~~l~~~~~~~n~~l 228 (665)
+|++|+|++..|..+..+++|+.|++++|++++.++.. .+++|+.|++++|++++.+|.. ..+.+|..+++++|++.
T Consensus 139 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (272)
T 3rfs_A 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 218 (272)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcc
Confidence 99999999887777899999999999999999988865 7899999999999999887753 67889999999999999
Q ss_pred CCCC
Q 005999 229 CGKV 232 (665)
Q Consensus 229 c~~~ 232 (665)
|.++
T Consensus 219 ~~~~ 222 (272)
T 3rfs_A 219 CTCP 222 (272)
T ss_dssp CCTT
T ss_pred ccCc
Confidence 8765
No 271
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.79 E-value=4.8e-19 Score=193.16 Aligned_cols=159 Identities=22% Similarity=0.189 Sum_probs=92.3
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 75 RVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 75 ~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
.++.|+|++|++++ +++..|.++++|+.|+|++|+|+++++ .|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 76 ~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 76 NTRYLNLMENNIQM-IQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TCSEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CccEEECcCCcCce-ECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 46666666666663 333355556666666666555555554 4555555555555555555333333444444444444
Q ss_pred eccccc-----------------------------------------------------------------------ccC
Q 005999 154 SYNNLT-----------------------------------------------------------------------GLI 162 (665)
Q Consensus 154 ~~N~l~-----------------------------------------------------------------------~~~ 162 (665)
++|+|+ +..
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~ 234 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIR 234 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCCTTCTTCCEEECTTSCCSEEC
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccccccccccccEEECcCCcCcccC
Confidence 444433 333
Q ss_pred CccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCC-CcccCcCcccccCCCCCCCCCCC
Q 005999 163 PVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPET-PTLLKFDASSFSMNPNLCGKVIN 234 (665)
Q Consensus 163 p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~-~~l~~l~~~~~~~n~~lc~~~~~ 234 (665)
|..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|+|++.++.. ..+.+|..+++++||+.|+|.+.
T Consensus 235 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~~ 309 (452)
T 3zyi_A 235 PGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDIL 309 (452)
T ss_dssp GGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTTH
T ss_pred cccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCch
Confidence 334444445555555555555544433 5677888888888888655543 45778889999999999998753
No 272
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.78 E-value=6.6e-19 Score=179.73 Aligned_cols=159 Identities=24% Similarity=0.238 Sum_probs=103.0
Q ss_pred CCEEEEEecCCC-CcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEE
Q 005999 74 GRVVRFVLQSFG-LRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTIL 151 (665)
Q Consensus 74 ~~v~~l~l~~~~-l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 151 (665)
.+++.|+|++|. +. .+++..+..+++|++|+|++|++++.+| .|.++++|++|+|++|++++..+..|.++++|+.|
T Consensus 80 ~~L~~L~l~~n~~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 158 (285)
T 1ozn_A 80 ALLEQLDLSDNAQLR-SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 158 (285)
T ss_dssp TTCCEEECCSCTTCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCEEeCCCCCCcc-ccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEE
Confidence 456666666665 44 4544466666666666666666666655 56666677777777777665444556666677777
Q ss_pred EeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCC-CCcccCcCcccccCCCCC
Q 005999 152 DLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPE-TPTLLKFDASSFSMNPNL 228 (665)
Q Consensus 152 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~~l 228 (665)
+|++|+|++..+..+..+++|+.|+|++|++++.+|.. .+++|+.|++++|++++.++. ...+.+|..+++++|++.
T Consensus 159 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 159 FLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred ECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 77777776555555666677777777777776665543 566777777777777754432 244566777777777777
Q ss_pred CCCCC
Q 005999 229 CGKVI 233 (665)
Q Consensus 229 c~~~~ 233 (665)
|+|..
T Consensus 239 c~~~~ 243 (285)
T 1ozn_A 239 CDCRA 243 (285)
T ss_dssp CSGGG
T ss_pred CCCCc
Confidence 77654
No 273
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.77 E-value=4.6e-19 Score=169.74 Aligned_cols=152 Identities=21% Similarity=0.227 Sum_probs=125.4
Q ss_pred EEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCC--CCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEee
Q 005999 77 VRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPD--LSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLS 154 (665)
Q Consensus 77 ~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 154 (665)
+.|++++|+|+ .+|. .+.. +|+.|+|++|+|++.++. |+.+++|++|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~-~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPR-DIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCS-CCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCcc-CCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 35677888887 7887 4443 899999999999999883 8999999999999999999889999999999999999
Q ss_pred cccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCCCcccCcCcccccCCCCCCCCC
Q 005999 155 YNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNPNLCGKV 232 (665)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~lc~~~ 232 (665)
+|+|++..|..|..+++|+.|+|++|+|++.+|.. .+++|++|+|++|+|++..+...-...+....+.++...|+.|
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 99999988888999999999999999999998865 7899999999999999876632211123333444555556544
No 274
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.77 E-value=6.1e-19 Score=168.85 Aligned_cols=167 Identities=22% Similarity=0.306 Sum_probs=134.1
Q ss_pred CccccceeecC-----------CCEEEEEecCCCCcccCCc-cccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEc
Q 005999 63 YCQWQGVKCAQ-----------GRVVRFVLQSFGLRGTFPP-NTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSL 129 (665)
Q Consensus 63 ~C~w~gv~C~~-----------~~v~~l~l~~~~l~g~l~~-~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L 129 (665)
-|.|+.+.|+. ..++.|+|++|++++ +++ ..|..+++|+.|+|++|+|++.+| .|.++++|++|+|
T Consensus 7 ~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 85 (192)
T 1w8a_A 7 HCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGR-ISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQL 85 (192)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCS-BCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred EECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCc-cCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEEC
Confidence 37899999974 278999999999995 554 359999999999999999999988 8999999999999
Q ss_pred cCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCCC-CCCcceEecccccccccC
Q 005999 130 SRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLN-QPFLVVFNVSGNNLTGQV 208 (665)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~~L~~l~l~~N~l~~~~ 208 (665)
++|+|++..|..|.++++|++|+|++|+|++.+|..+..+++|+.|+|++|.+++..+... ...++...+..+......
T Consensus 86 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~ 165 (192)
T 1w8a_A 86 GENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGA 165 (192)
T ss_dssp CSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCS
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCC
Confidence 9999998888889999999999999999999999999999999999999999997655321 112333345555555555
Q ss_pred CCCCcccCcCcccccCCCCCCCCC
Q 005999 209 PETPTLLKFDASSFSMNPNLCGKV 232 (665)
Q Consensus 209 p~~~~l~~l~~~~~~~n~~lc~~~ 232 (665)
| ..+......++..+...|...
T Consensus 166 P--~~l~~~~l~~l~~~~~~C~~~ 187 (192)
T 1w8a_A 166 P--SKVRDVQIKDLPHSEFKCSSE 187 (192)
T ss_dssp S--TTTTTSBGGGSCTTTCCCCCC
T ss_pred C--hHHcCCChhhCcHhhcCcCCC
Confidence 5 344555555666666666544
No 275
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.76 E-value=1.8e-18 Score=175.55 Aligned_cols=158 Identities=20% Similarity=0.259 Sum_probs=98.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCC-cCcccccCCCCCCEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSG-AFPLSILSLHRLTIL 151 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L 151 (665)
.+++.|+|++|.+++ +++..|.++++|+.|+|++|++++..+ .++++++|++|+|++|++++ .+|..|.++++|+.|
T Consensus 76 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L 154 (276)
T 2z62_A 76 SHLSTLILTGNPIQS-LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154 (276)
T ss_dssp TTCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEE
T ss_pred cCCCEEECCCCccCc-cChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEE
Confidence 345555555555553 333355555555555555555555555 45555666666666666554 245556666666666
Q ss_pred EeecccccccCCccccCCCccC----eeecccccccccCCCC-CCCCcceEecccccccccCCCC-CcccCcCcccccCC
Q 005999 152 DLSYNNLTGLIPVNLTALDRLY----SLKLEWNRFSGTVPPL-NQPFLVVFNVSGNNLTGQVPET-PTLLKFDASSFSMN 225 (665)
Q Consensus 152 ~L~~N~l~~~~p~~~~~l~~L~----~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~l~~~~p~~-~~l~~l~~~~~~~n 225 (665)
+|++|++++..+..+..+++|+ .|++++|++++.++.. ...+|+.|++++|+|++.++.. ..+.+|..+++++|
T Consensus 155 ~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N 234 (276)
T 2z62_A 155 DLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234 (276)
T ss_dssp ECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSS
T ss_pred ECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCC
Confidence 6666666555555555444444 5566666666555544 4457899999999998766643 56788899999999
Q ss_pred CCCCCCC
Q 005999 226 PNLCGKV 232 (665)
Q Consensus 226 ~~lc~~~ 232 (665)
|+.|+|+
T Consensus 235 ~~~c~c~ 241 (276)
T 2z62_A 235 PWDCSCP 241 (276)
T ss_dssp CBCCCTT
T ss_pred cccccCC
Confidence 9999875
No 276
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.76 E-value=4.3e-18 Score=173.67 Aligned_cols=152 Identities=23% Similarity=0.229 Sum_probs=130.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcc-cCCcCcccccCCCCCCEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNF-FSGAFPLSILSLHRLTIL 151 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L 151 (665)
..++.|+|++|+++ .+++..|.++++|++|+|++|.+++..| .|.++++|++|+|++|. ++...|..|.++++|++|
T Consensus 32 ~~l~~L~l~~n~i~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 32 AASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TTCSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCcCC-ccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 47899999999998 4666679999999999999999998877 78899999999999997 776668889999999999
Q ss_pred EeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCC-CCcccCcCcccccCCC
Q 005999 152 DLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPE-TPTLLKFDASSFSMNP 226 (665)
Q Consensus 152 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~ 226 (665)
+|++|++++..|..+..+++|+.|++++|++++.++.. .+++|+.|++++|++++..+. ...+.+|..+++++|.
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 188 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR 188 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCc
Confidence 99999999888888899999999999999999887763 788999999999999876664 4567788888888875
No 277
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=1.2e-18 Score=170.54 Aligned_cols=145 Identities=21% Similarity=0.262 Sum_probs=131.3
Q ss_pred CccccceeecC-----------CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEcc
Q 005999 63 YCQWQGVKCAQ-----------GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLS 130 (665)
Q Consensus 63 ~C~w~gv~C~~-----------~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls 130 (665)
.|.|..|.|.. ..++.|+|++|+++ .+++..|..+++|+.|+|++|+|+++.| .|.++++|++|+|+
T Consensus 10 ~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~-~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls 88 (220)
T 2v9t_B 10 TCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 88 (220)
T ss_dssp EEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCC-EECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECC
T ss_pred EECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCC-CcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECC
Confidence 37899999974 36899999999999 5777789999999999999999999988 89999999999999
Q ss_pred CcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccC
Q 005999 131 RNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQV 208 (665)
Q Consensus 131 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~ 208 (665)
+|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|+|....
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 89 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 99999555556789999999999999999998999999999999999999999998864 7899999999999998653
No 278
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.75 E-value=1.3e-17 Score=161.65 Aligned_cols=158 Identities=23% Similarity=0.177 Sum_probs=136.2
Q ss_pred ceeecCCCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCC
Q 005999 68 GVKCAQGRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLH 146 (665)
Q Consensus 68 gv~C~~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 146 (665)
+..|.. +.++..+++++ .+|. .+ .++|++|+|++|++++.++ .|.++++|++|+|++|+|++..+..|.+++
T Consensus 4 ~C~C~~---~~v~c~~~~l~-~~p~-~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 76 (208)
T 2o6s_A 4 RCSCSG---TTVECYSQGRT-SVPT-GI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLT 76 (208)
T ss_dssp TCEEET---TEEECCSSCCS-SCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT
T ss_pred CCEECC---CEEEecCCCcc-CCCC-CC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCC
Confidence 345643 46788999998 6775 33 4689999999999998888 589999999999999999966666789999
Q ss_pred CCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCC-CCcccCcCccccc
Q 005999 147 RLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPE-TPTLLKFDASSFS 223 (665)
Q Consensus 147 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~-~~~l~~l~~~~~~ 223 (665)
+|++|+|++|+|++..+..+..+++|+.|+|++|++++.++.. .+++|+.|++++|+|++.++. ...+.+|..++++
T Consensus 77 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 156 (208)
T 2o6s_A 77 SLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLH 156 (208)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEec
Confidence 9999999999999777777899999999999999999988864 789999999999999977665 3668899999999
Q ss_pred CCCCCCCCC
Q 005999 224 MNPNLCGKV 232 (665)
Q Consensus 224 ~n~~lc~~~ 232 (665)
+|++.|.++
T Consensus 157 ~N~~~~~~~ 165 (208)
T 2o6s_A 157 DNPWDCTCP 165 (208)
T ss_dssp SCCBCCCTT
T ss_pred CCCeecCCC
Confidence 999988764
No 279
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.74 E-value=3.8e-18 Score=179.76 Aligned_cols=164 Identities=22% Similarity=0.250 Sum_probs=138.7
Q ss_pred CCCccccceeecC-------------CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCE
Q 005999 61 FDYCQWQGVKCAQ-------------GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKS 126 (665)
Q Consensus 61 ~~~C~w~gv~C~~-------------~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~ 126 (665)
..+|.|.|+ |+. .+++.|+|++|+++ .+++..|.++++|+.|+|++|++++.+| .|.++++|++
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 104 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCc-ccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCE
Confidence 567888887 652 37999999999999 5776689999999999999999999988 6999999999
Q ss_pred EEccCcccCCcCcccccCCCCCCEEEeecccccccCC-ccccCCCccCeeecccc-cccccCCCC--CCCCcceEecccc
Q 005999 127 LSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIP-VNLTALDRLYSLKLEWN-RFSGTVPPL--NQPFLVVFNVSGN 202 (665)
Q Consensus 127 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N-~l~~~~~~~--~~~~L~~l~l~~N 202 (665)
|+|++|++++..+..|.++++|++|+|++|++++..+ ..+..+++|+.|++++| .+++.++.. .+++|+.|++++|
T Consensus 105 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 184 (353)
T 2z80_A 105 LDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDAS 184 (353)
T ss_dssp EECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred EECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCC
Confidence 9999999996555559999999999999999994433 37899999999999999 577776654 7899999999999
Q ss_pred cccccCCC-CCcccCcCcccccCCC
Q 005999 203 NLTGQVPE-TPTLLKFDASSFSMNP 226 (665)
Q Consensus 203 ~l~~~~p~-~~~l~~l~~~~~~~n~ 226 (665)
++++..|. ...+.+|..+++++|.
T Consensus 185 ~l~~~~~~~l~~l~~L~~L~l~~n~ 209 (353)
T 2z80_A 185 DLQSYEPKSLKSIQNVSHLILHMKQ 209 (353)
T ss_dssp TCCEECTTTTTTCSEEEEEEEECSC
T ss_pred CcCccCHHHHhccccCCeecCCCCc
Confidence 99988664 3566777888888775
No 280
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.74 E-value=8e-18 Score=172.05 Aligned_cols=151 Identities=30% Similarity=0.299 Sum_probs=134.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
..++.|+|++|.+++ +++..|.++++|+.|+|++|.|++..+. +.+++|+.|+|++|+|+ .+|..+.++++|+.|+|
T Consensus 31 ~~l~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYT-FSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSE-EEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCc-cCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 478999999999995 5555899999999999999999987664 88999999999999999 89999999999999999
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCC-CcccCcCcccccCCCC
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPET-PTLLKFDASSFSMNPN 227 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~-~~l~~l~~~~~~~n~~ 227 (665)
++|+|++..|..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|+|++.++.. ..+.+|..+++++|..
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l 184 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcC
Confidence 999999887788999999999999999999988865 7899999999999999766544 5688899999998854
No 281
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.74 E-value=2.8e-18 Score=178.75 Aligned_cols=152 Identities=22% Similarity=0.317 Sum_probs=129.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccC---------
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILS--------- 144 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--------- 144 (665)
.+++.|+|++|+++ .+|. .++++++|++|+|++|+|+.+++.|+++++|++|+|++|++.+.+|..+..
T Consensus 104 ~~L~~L~L~~n~l~-~lp~-~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPD-TMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCS-CGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhH-HHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 57899999999999 8886 789999999999999999955448889999999999998888889887765
Q ss_pred CCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC-CCCCcceEecccccccccCCCC-CcccCcCcccc
Q 005999 145 LHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL-NQPFLVVFNVSGNNLTGQVPET-PTLLKFDASSF 222 (665)
Q Consensus 145 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~l~~~~p~~-~~l~~l~~~~~ 222 (665)
+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++.++.+ .+++|+.|++++|++.+.+|.. ..+.+|..+++
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 260 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEEC
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEEC
Confidence 899999999999998 88888999999999999999999877766 7888999999999988888753 56778888888
Q ss_pred cCCCCC
Q 005999 223 SMNPNL 228 (665)
Q Consensus 223 ~~n~~l 228 (665)
++|+..
T Consensus 261 ~~n~~~ 266 (328)
T 4fcg_A 261 KDCSNL 266 (328)
T ss_dssp TTCTTC
T ss_pred CCCCch
Confidence 887653
No 282
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.74 E-value=3.6e-18 Score=176.13 Aligned_cols=159 Identities=20% Similarity=0.201 Sum_probs=99.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCC-cCcccccCCCCCCEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSG-AFPLSILSLHRLTIL 151 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L 151 (665)
..++.|+|++|++++..+...+..+++|++|+|++|.+++.++ .|.++++|+.|+|++|.+++ .+|..|..+++|+.|
T Consensus 101 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 180 (306)
T 2z66_A 101 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 180 (306)
T ss_dssp TTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEE
Confidence 4555566666655532221356666666666666666666555 46666666666666666664 456666666667777
Q ss_pred EeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCC-Ccc-cCcCcccccCCCC
Q 005999 152 DLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPET-PTL-LKFDASSFSMNPN 227 (665)
Q Consensus 152 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~-~~l-~~l~~~~~~~n~~ 227 (665)
+|++|+|++..|..+..+++|+.|+|++|++++.++.. .+++|+.|++++|++++..|.. ..+ .+|..+++++|+.
T Consensus 181 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~ 260 (306)
T 2z66_A 181 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 260 (306)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCE
T ss_pred ECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCe
Confidence 77777666666666666667777777777766655532 5566777777777777665532 333 3566677777777
Q ss_pred CCCCC
Q 005999 228 LCGKV 232 (665)
Q Consensus 228 lc~~~ 232 (665)
.|+|.
T Consensus 261 ~~~c~ 265 (306)
T 2z66_A 261 ACTCE 265 (306)
T ss_dssp ECSGG
T ss_pred ecccC
Confidence 66654
No 283
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.74 E-value=6.5e-18 Score=183.51 Aligned_cols=158 Identities=26% Similarity=0.282 Sum_probs=123.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-C-------------------------CCCCCCCCEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-D-------------------------LSSLINLKSL 127 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~-------------------------~~~l~~L~~L 127 (665)
.+++.|+|++|+|+ .+++..|..+++|+.|+|++|+|+.+++ . |.++++|++|
T Consensus 112 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 190 (440)
T 3zyj_A 112 ANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYL 190 (440)
T ss_dssp SSCCEEECCSSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEE
T ss_pred ccCCEEECCCCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCee
Confidence 57888888888888 5666678888888888888888776655 3 4455566666
Q ss_pred EccCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEeccccccc
Q 005999 128 SLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLT 205 (665)
Q Consensus 128 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~ 205 (665)
+|++|+|+ .+| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|+|+
T Consensus 191 ~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 191 NLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268 (440)
T ss_dssp ECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCC
T ss_pred cCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCC
Confidence 66666666 455 4667777888888888888777888888888888888888888887764 7889999999999999
Q ss_pred ccCCCC-CcccCcCcccccCCCCCCCCCCC
Q 005999 206 GQVPET-PTLLKFDASSFSMNPNLCGKVIN 234 (665)
Q Consensus 206 ~~~p~~-~~l~~l~~~~~~~n~~lc~~~~~ 234 (665)
+.++.. ..+.+|..+++++||+.|+|.+.
T Consensus 269 ~~~~~~~~~l~~L~~L~L~~Np~~CdC~l~ 298 (440)
T 3zyj_A 269 LLPHDLFTPLHHLERIHLHHNPWNCNCDIL 298 (440)
T ss_dssp CCCTTTTSSCTTCCEEECCSSCEECSSTTH
T ss_pred ccChhHhccccCCCEEEcCCCCccCCCCch
Confidence 766644 56788999999999999999753
No 284
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.73 E-value=1.3e-17 Score=164.30 Aligned_cols=135 Identities=21% Similarity=0.191 Sum_probs=123.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
..++.|+|++|++++ +++..|.++++|+.|+|++|+|+.+++ .|..+++|+.|+|++|+|++..+..|..+++|+.|+
T Consensus 40 ~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 118 (229)
T 3e6j_A 40 TNAQILYLHDNQITK-LEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELF 118 (229)
T ss_dssp TTCSEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEcCCCccCc-cCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEe
Confidence 689999999999996 544589999999999999999998887 589999999999999999976677789999999999
Q ss_pred eecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCC
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPE 210 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~ 210 (665)
|++|+|+ .+|..+..+++|+.|+|++|+|++.++.. .+++|+.|++++|++++..+.
T Consensus 119 Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 177 (229)
T 3e6j_A 119 MCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECRD 177 (229)
T ss_dssp CCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBGG
T ss_pred ccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcch
Confidence 9999999 88999999999999999999999988764 789999999999999987653
No 285
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.73 E-value=3.9e-18 Score=171.27 Aligned_cols=135 Identities=14% Similarity=0.163 Sum_probs=103.8
Q ss_pred hHhCcccceEEEEEEE-CCeEE--EEEEEecCCCch----------------------hhHHHHHHHHHHHHhCCCCCCe
Q 005999 395 ELLGRGSIGTTYKAVL-DNHLI--VTVKRFDANKTA----------------------DTSAEAFEQHMEAVGGLSHPNL 449 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~----------------------~~~~~~~~~e~~~l~~l~h~ni 449 (665)
+.||+|+||.||+|.. .+|+. ||||+++..... ......+.+|++.+.+++|+++
T Consensus 53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 132 (258)
T 1zth_A 53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGV 132 (258)
T ss_dssp EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5799999999999997 67888 999987543211 1122468899999999988864
Q ss_pred --eeeeEEEEeCCeEEEEEEecCC-C----CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCeeccCCCC
Q 005999 450 --VPIRAYFQAKGERLVIYDYQPN-G----SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH-RASWLIHGNLKS 521 (665)
Q Consensus 450 --v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH-~~~~iiH~Dlk~ 521 (665)
..++++ +..++||||+.+ | +|.++... .++..+..++.|++.||.||| +.+ |+||||||
T Consensus 133 ~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~g-ivHrDlkp 199 (258)
T 1zth_A 133 SVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEAE-LVHADLSE 199 (258)
T ss_dssp CCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTSC-EECSSCST
T ss_pred CCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCH
Confidence 333332 356899999942 4 77776532 223456789999999999999 888 99999999
Q ss_pred CceEeCCCCceEEeecccccccC
Q 005999 522 SNVLLGADFEARLTDYCLSVLSD 544 (665)
Q Consensus 522 ~Nill~~~~~~kl~Dfgl~~~~~ 544 (665)
+|||+++ .++|+|||++....
T Consensus 200 ~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 200 YNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp TSEEESS--SEEECCCTTCEETT
T ss_pred HHEEEcC--cEEEEECcccccCC
Confidence 9999998 99999999996653
No 286
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.73 E-value=2.4e-17 Score=166.74 Aligned_cols=162 Identities=20% Similarity=0.196 Sum_probs=138.0
Q ss_pred CCCccccceeecC-CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcC
Q 005999 61 FDYCQWQGVKCAQ-GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAF 138 (665)
Q Consensus 61 ~~~C~w~gv~C~~-~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~ 138 (665)
.++|.|.|+.|.- ..++.+++++++|+ .+|. .+. ++|+.|+|++|++++.++ .|.++++|++|+|++|+++...
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~-~ip~-~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLT-AIPS-NIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCS-SCCS-CCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCC-ccCC-CCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 5789999999974 56788999999999 6876 343 689999999999998888 7999999999999999999555
Q ss_pred cccccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCC-CCccc
Q 005999 139 PLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPE-TPTLL 215 (665)
Q Consensus 139 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~-~~~l~ 215 (665)
+..|.++++|++|+|++|++++..+..+..+++|+.|+|++|++++.++.. .+++|++|++++|+|++..+. ...+.
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 556688999999999999999777777889999999999999999988864 789999999999999976654 35678
Q ss_pred CcCcccccCCC
Q 005999 216 KFDASSFSMNP 226 (665)
Q Consensus 216 ~l~~~~~~~n~ 226 (665)
+|..+++++|.
T Consensus 158 ~L~~L~L~~n~ 168 (270)
T 2o6q_A 158 SLKELRLYNNQ 168 (270)
T ss_dssp TCCEEECCSSC
T ss_pred ccceeEecCCc
Confidence 88889988884
No 287
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.73 E-value=4.8e-18 Score=192.28 Aligned_cols=161 Identities=17% Similarity=0.111 Sum_probs=124.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCC-cCcccccCCCCCCEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSG-AFPLSILSLHRLTIL 151 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L 151 (665)
..++.|+|++|.+.+..+...+.++++|+.|+|++|++++.+| .+.++++|+.|+|++|++++ .+|..|..+++|+.|
T Consensus 399 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 478 (606)
T 3vq2_A 399 EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFL 478 (606)
T ss_dssp TTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEE
Confidence 4566677777777755553467777788888888888877776 67788888888888888886 367778888888888
Q ss_pred EeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCCCccc-CcCcccccCCCCC
Q 005999 152 DLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPETPTLL-KFDASSFSMNPNL 228 (665)
Q Consensus 152 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~~~l~-~l~~~~~~~n~~l 228 (665)
+|++|++++..|..+..+++|+.|+|++|++++.+|.. .+++|+.|++++|+|+..++....+. +|..+++++||+.
T Consensus 479 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~ 558 (606)
T 3vq2_A 479 DLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558 (606)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCC
T ss_pred ECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcc
Confidence 88888888888888888888888888888888876654 67888899999998885444444554 4888999999999
Q ss_pred CCCCCC
Q 005999 229 CGKVIN 234 (665)
Q Consensus 229 c~~~~~ 234 (665)
|+|+..
T Consensus 559 c~c~~~ 564 (606)
T 3vq2_A 559 CICEHQ 564 (606)
T ss_dssp CSSTTH
T ss_pred cCCccH
Confidence 998764
No 288
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.73 E-value=7.3e-18 Score=188.43 Aligned_cols=162 Identities=17% Similarity=0.166 Sum_probs=138.4
Q ss_pred CccccceeecC-------------CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEE
Q 005999 63 YCQWQGVKCAQ-------------GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLS 128 (665)
Q Consensus 63 ~C~w~gv~C~~-------------~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~ 128 (665)
.|.|.|+ |+. ..++.|+|++|++++ +++..|.++++|++|+|++|++++.+| .|+++++|++|+
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITY-IGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCE-ECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCc-cChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 4899998 863 379999999999995 544589999999999999999999998 799999999999
Q ss_pred ccCcccCCcCcccccCCCCCCEEEeecccccc-cCCccccCCCccCeeecccccccccCC-C-C-CCCCcceEecccccc
Q 005999 129 LSRNFFSGAFPLSILSLHRLTILDLSYNNLTG-LIPVNLTALDRLYSLKLEWNRFSGTVP-P-L-NQPFLVVFNVSGNNL 204 (665)
Q Consensus 129 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~-~-~-~~~~L~~l~l~~N~l 204 (665)
|++|++++..|..|+++++|++|+|++|++++ .+|..+.++++|+.|++++|++.+.+| . + .+++|+.|++++|++
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 99999998888889999999999999999997 467789999999999999999544444 3 3 789999999999999
Q ss_pred cccCCCC-CcccCcCcccccCCC
Q 005999 205 TGQVPET-PTLLKFDASSFSMNP 226 (665)
Q Consensus 205 ~~~~p~~-~~l~~l~~~~~~~n~ 226 (665)
++.+|.. ..+.+|..+++++|.
T Consensus 161 ~~~~~~~l~~l~~L~~L~l~~n~ 183 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHLTLHLSE 183 (549)
T ss_dssp CEECTTTTTTCSEEEEEEEECSB
T ss_pred cccChhhhhccccCceEecccCc
Confidence 9977743 445566666666654
No 289
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.72 E-value=1.7e-17 Score=164.54 Aligned_cols=152 Identities=16% Similarity=0.120 Sum_probs=132.4
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCc-CccCCC-CCCCCCCCCEEEccC-cccCCcCcccccCCCCCCE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNS-LTGPIP-DLSSLINLKSLSLSR-NFFSGAFPLSILSLHRLTI 150 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~-l~~~~p-~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~ 150 (665)
..++.|+|++|+++ .+++..|.++++|+.|+|++|+ ++++++ .|.++++|++|+|++ |+|++..+..|.++++|+.
T Consensus 31 ~~l~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 31 PSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TTCCEEEEESCCCS-EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CcccEEEEeCCcce-EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 57999999999999 5777789999999999999997 998888 799999999999998 9999766788999999999
Q ss_pred EEeecccccccCCccccCCCccC---eeecccc-cccccCCCC--CCCCcc-eEecccccccccCCCCCcccCcCccccc
Q 005999 151 LDLSYNNLTGLIPVNLTALDRLY---SLKLEWN-RFSGTVPPL--NQPFLV-VFNVSGNNLTGQVPETPTLLKFDASSFS 223 (665)
Q Consensus 151 L~L~~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~~~~--~~~~L~-~l~l~~N~l~~~~p~~~~l~~l~~~~~~ 223 (665)
|+|++|++++ +|. +..+++|+ .|++++| ++++.++.. .+++|+ .|++++|+++...+......+|..++++
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECT
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcC
Confidence 9999999996 776 88899998 9999999 999988864 789999 9999999999544433334678888999
Q ss_pred CCCCC
Q 005999 224 MNPNL 228 (665)
Q Consensus 224 ~n~~l 228 (665)
+|+.+
T Consensus 188 ~n~~l 192 (239)
T 2xwt_C 188 KNKYL 192 (239)
T ss_dssp TCTTC
T ss_pred CCCCc
Confidence 88644
No 290
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.72 E-value=7.2e-18 Score=183.88 Aligned_cols=134 Identities=20% Similarity=0.216 Sum_probs=124.0
Q ss_pred CCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeec
Q 005999 99 DQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKL 177 (665)
Q Consensus 99 ~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 177 (665)
++|+.|+|++|++++.+| .|+.+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..|..+..+++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 689999999999999988 7999999999999999999888999999999999999999999888999999999999999
Q ss_pred ccccccccCCCC--CCCCcceEecccccccccCCCC-CcccCcCcccccCCCCCCCCC
Q 005999 178 EWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPET-PTLLKFDASSFSMNPNLCGKV 232 (665)
Q Consensus 178 ~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~-~~l~~l~~~~~~~n~~lc~~~ 232 (665)
++|++++.+|.. .+++|++|++++|+|++.++.. ..+.+|..+++++|+..|+|+
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999998764 8899999999999999866644 578899999999999999886
No 291
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.72 E-value=4.9e-17 Score=162.58 Aligned_cols=161 Identities=20% Similarity=0.165 Sum_probs=142.7
Q ss_pred CCccccceeecCCCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcc
Q 005999 62 DYCQWQGVKCAQGRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPL 140 (665)
Q Consensus 62 ~~C~w~gv~C~~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~ 140 (665)
+||.|.|++|.. ..+.+++++++++ .+|. .+. ++|+.|+|++|++++..+ .|.++++|++|+|++|+|++..|.
T Consensus 3 ~Cp~~~gC~C~~-~~~~l~~~~~~l~-~~p~-~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 77 (251)
T 3m19_A 3 TCETVTGCTCNE-GKKEVDCQGKSLD-SVPS-GIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAG 77 (251)
T ss_dssp -CHHHHSSEEEG-GGTEEECTTCCCS-SCCS-CCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT
T ss_pred cCCCCCceEcCC-CCeEEecCCCCcc-ccCC-CCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHh
Confidence 688999999963 3346899999999 7887 444 689999999999999998 799999999999999999988888
Q ss_pred cccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCC-CCcccCc
Q 005999 141 SILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPE-TPTLLKF 217 (665)
Q Consensus 141 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~-~~~l~~l 217 (665)
.|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|+|++.++. ...+.+|
T Consensus 78 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 157 (251)
T 3m19_A 78 VFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNL 157 (251)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred HhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCC
Confidence 8999999999999999999888888899999999999999999988864 789999999999999987773 4678889
Q ss_pred CcccccCCCC
Q 005999 218 DASSFSMNPN 227 (665)
Q Consensus 218 ~~~~~~~n~~ 227 (665)
..+++++|..
T Consensus 158 ~~L~L~~N~l 167 (251)
T 3m19_A 158 QTLSLSTNQL 167 (251)
T ss_dssp CEEECCSSCC
T ss_pred CEEECCCCcC
Confidence 9999999853
No 292
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.72 E-value=6.7e-18 Score=198.32 Aligned_cols=138 Identities=23% Similarity=0.261 Sum_probs=123.1
Q ss_pred cCCCCCCcEEEccCCcCccCCC--CCCCCCCCCEEEccCcccC-----CcCcccccCCCCCCEEEeecccccccCCcccc
Q 005999 95 LTRLDQLRVLSLHNNSLTGPIP--DLSSLINLKSLSLSRNFFS-----GAFPLSILSLHRLTILDLSYNNLTGLIPVNLT 167 (665)
Q Consensus 95 ~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 167 (665)
+.++++|+.|+|++|++++..+ .+..+++|+.|+|++|.++ +..|..|.++++|+.|+|++|+|++..|..|.
T Consensus 422 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 501 (844)
T 3j0a_A 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFS 501 (844)
T ss_dssp HTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSS
T ss_pred hhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHcc
Confidence 4578999999999999998766 4677899999999999997 45567789999999999999999999999999
Q ss_pred CCCccCeeecccccccccCCCCCCCCcceEecccccccccCCCCCcccCcCcccccCCCCCCCCCCC
Q 005999 168 ALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNPNLCGKVIN 234 (665)
Q Consensus 168 ~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~lc~~~~~ 234 (665)
.+++|+.|+|++|+|++.++....++|+.|+|++|+|++.+| ..+.++..+++++||+.|+|.+.
T Consensus 502 ~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~--~~~~~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 502 HLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNP--DVFVSLSVLDITHNKFICECELS 566 (844)
T ss_dssp SCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCS--CCCSSCCEEEEEEECCCCSSSCC
T ss_pred chhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCCh--hHhCCcCEEEecCCCcccccccH
Confidence 999999999999999998887755899999999999999988 45678999999999999999764
No 293
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.72 E-value=7.7e-18 Score=173.60 Aligned_cols=162 Identities=23% Similarity=0.282 Sum_probs=127.9
Q ss_pred CccccceeecC-----------CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCC--C-CCCCCCCCCEEE
Q 005999 63 YCQWQGVKCAQ-----------GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPI--P-DLSSLINLKSLS 128 (665)
Q Consensus 63 ~C~w~gv~C~~-----------~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~--p-~~~~l~~L~~L~ 128 (665)
.|.|.+|.|+. ..++.|+|++|+++ .+|+..|.++++|+.|+|++|+++... + .+..+++|++|+
T Consensus 6 ~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 6 SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEE
T ss_pred eeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEE
Confidence 48899999974 37999999999999 788877899999999999999998542 3 566788888888
Q ss_pred ccCcccCCcCcccccCCCCCCEEEeecccccccCC-ccccCCCccCeeecccccccccCCCC--CCCCcceEeccccccc
Q 005999 129 LSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIP-VNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLT 205 (665)
Q Consensus 129 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~ 205 (665)
|++|.++ .+|..+.++++|++|+|++|++++..+ ..+..+++|+.|++++|++++.++.. .+++|+.|++++|.++
T Consensus 85 Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 163 (306)
T 2z66_A 85 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 163 (306)
T ss_dssp CCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEG
T ss_pred CCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccc
Confidence 8888888 677778888888888888888885544 46778888888888888888777664 6778888888888887
Q ss_pred c-cCC-CCCcccCcCcccccCCC
Q 005999 206 G-QVP-ETPTLLKFDASSFSMNP 226 (665)
Q Consensus 206 ~-~~p-~~~~l~~l~~~~~~~n~ 226 (665)
+ .+| ....+.+|..+++++|.
T Consensus 164 ~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 164 ENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp GGEECSCCTTCTTCCEEECTTSC
T ss_pred cccchhHHhhCcCCCEEECCCCC
Confidence 6 334 33556677777777764
No 294
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.72 E-value=1.8e-17 Score=168.26 Aligned_cols=151 Identities=21% Similarity=0.205 Sum_probs=126.3
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 75 RVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 75 ~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
.++.|+|++|+++ .+++..|.++++|++|+|++|++++.++ .|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 29 ~l~~L~ls~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCC-EECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CccEEECCCCccc-ccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 6899999999999 4665589999999999999999998888 7899999999999999999888888999999999999
Q ss_pred ecccccccCCccccCCCccCeeeccccccccc-CCCC--CCCCcceEecccccccccCCCC-CcccCcC----cccccCC
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGT-VPPL--NQPFLVVFNVSGNNLTGQVPET-PTLLKFD----ASSFSMN 225 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~--~~~~L~~l~l~~N~l~~~~p~~-~~l~~l~----~~~~~~n 225 (665)
++|++++..+..+..+++|+.|++++|++++. +|.. .+++|+.|++++|++++..+.. ..+.++. .+++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 99999977777899999999999999999874 3543 7889999999999998765522 3344444 5666666
Q ss_pred C
Q 005999 226 P 226 (665)
Q Consensus 226 ~ 226 (665)
.
T Consensus 188 ~ 188 (276)
T 2z62_A 188 P 188 (276)
T ss_dssp C
T ss_pred c
Confidence 4
No 295
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.72 E-value=3.6e-17 Score=165.66 Aligned_cols=136 Identities=25% Similarity=0.276 Sum_probs=125.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
.+++.|+|++|+++ .+++..+.++++|++|+|++|++++.++ .|+++++|++|+|++|+|++..|..|.++++|+.|+
T Consensus 85 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 85 TNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp TTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccC-ccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 68999999999999 5666679999999999999999999988 589999999999999999977777789999999999
Q ss_pred eecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCC
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPE 210 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~ 210 (665)
|++|+|++..|..+..+++|+.|+|++|++++.++.. .+++|+.|++++|++.+.+|.
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcH
Confidence 9999999888878899999999999999999998864 789999999999999988774
No 296
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.71 E-value=2.9e-17 Score=178.32 Aligned_cols=151 Identities=21% Similarity=0.218 Sum_probs=106.6
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
..++.|+|++|++. .+++..|.++++|+.|+|++|+|+++.+ .|.++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 64 ~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 142 (440)
T 3zyj_A 64 TNTRLLNLHENQIQ-IIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELW 142 (440)
T ss_dssp TTCSEEECCSCCCC-EECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEE
T ss_pred CCCcEEEccCCcCC-eeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceee
Confidence 35777888888888 4555578888888888888888887776 677888888888888888855555677888888888
Q ss_pred eecccccccCCccccCCCccCeeeccccc-ccccCCCC--CCCCcceEecccccccccCCCCCcccCcCcccccCCC
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNR-FSGTVPPL--NQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNP 226 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 226 (665)
|++|+|+...+..|..+++|+.|+|++|+ +...++.. .+++|+.|++++|+|+ .+|....+.+|..+++++|.
T Consensus 143 L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~ 218 (440)
T 3zyj_A 143 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNH 218 (440)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCCTTCSSCCEEECTTSC
T ss_pred CCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccccCCCcccCEEECCCCc
Confidence 88888876666667777777777777743 43333322 5666777777777766 34555556666666666663
No 297
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.71 E-value=4e-17 Score=153.98 Aligned_cols=134 Identities=25% Similarity=0.274 Sum_probs=114.3
Q ss_pred CccccceeecCCCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCccc
Q 005999 63 YCQWQGVKCAQGRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLS 141 (665)
Q Consensus 63 ~C~w~gv~C~~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~ 141 (665)
.|+|.++.| ++++++ .+|. .+ .++|+.|+|++|++++.++ .|.++++|++|+|++|+|++..+..
T Consensus 6 ~C~~~~l~~----------~~~~l~-~~p~-~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 6 SCSGTEIRC----------NSKGLT-SVPT-GI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp EEETTEEEC----------CSSCCS-SCCT-TC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred EeCCCEEEe----------cCCCCc-cCCC-CC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 367877766 456666 5664 23 3689999999999998888 6799999999999999999666667
Q ss_pred ccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCC
Q 005999 142 ILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPE 210 (665)
Q Consensus 142 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~ 210 (665)
|.++++|+.|+|++|+|++..+..+..+++|+.|+|++|++++.++.. .+++|+.|++++|++++.+|.
T Consensus 72 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 899999999999999999777777899999999999999999888764 689999999999999987663
No 298
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.71 E-value=2.1e-17 Score=180.10 Aligned_cols=165 Identities=21% Similarity=0.232 Sum_probs=137.3
Q ss_pred CCCccccc--eeecC----------CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC--CCCCCCCCCE
Q 005999 61 FDYCQWQG--VKCAQ----------GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP--DLSSLINLKS 126 (665)
Q Consensus 61 ~~~C~w~g--v~C~~----------~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~ 126 (665)
...|.|.+ |.|+. .+++.|+|++|.+++ +++..|.++++|++|+|++|.+.+.++ .|.++++|++
T Consensus 5 ~~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~ 83 (455)
T 3v47_A 5 TSECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAE-LNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLII 83 (455)
T ss_dssp --CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCE-ECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCE
T ss_pred cceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCc-CChhHhccCccccEEECcCCcccceECcccccccccCCE
Confidence 34566666 77764 369999999999995 544589999999999999999986554 6999999999
Q ss_pred EEccCcccCCcCcccccCCCCCCEEEeecccccccCCcc--ccCCCccCeeecccccccccCCC--C-CCCCcceEeccc
Q 005999 127 LSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVN--LTALDRLYSLKLEWNRFSGTVPP--L-NQPFLVVFNVSG 201 (665)
Q Consensus 127 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~~~--~-~~~~L~~l~l~~ 201 (665)
|+|++|++++..|..|.++++|++|+|++|++++.+|.. +..+++|+.|+|++|++++..|. + .+++|++|++++
T Consensus 84 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~ 163 (455)
T 3v47_A 84 LKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTF 163 (455)
T ss_dssp EECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTT
T ss_pred EeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCC
Confidence 999999999888999999999999999999999866665 89999999999999999999776 3 789999999999
Q ss_pred ccccccCCCC-Ccc--cCcCcccccCCC
Q 005999 202 NNLTGQVPET-PTL--LKFDASSFSMNP 226 (665)
Q Consensus 202 N~l~~~~p~~-~~l--~~l~~~~~~~n~ 226 (665)
|++++..|.. ..+ .++..+++++|.
T Consensus 164 n~l~~~~~~~l~~l~~~~L~~L~l~~n~ 191 (455)
T 3v47_A 164 NKVKSICEEDLLNFQGKHFTLLRLSSIT 191 (455)
T ss_dssp CCBSCCCTTTSGGGTTCEEEEEECTTCB
T ss_pred CcccccChhhhhccccccccccccccCc
Confidence 9999887743 222 345555565553
No 299
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.70 E-value=4.7e-17 Score=182.46 Aligned_cols=158 Identities=20% Similarity=0.143 Sum_probs=139.2
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCC--C-CCCCCCCCCEEEccCcccCCcCccc-ccCCCCC
Q 005999 73 QGRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPI--P-DLSSLINLKSLSLSRNFFSGAFPLS-ILSLHRL 148 (665)
Q Consensus 73 ~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~--p-~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L 148 (665)
...++.|+|++|.+++.+|. .+.++++|+.|+|++|++++.. | .|.++++|+.|+|++|++++.+|.. +..+++|
T Consensus 352 l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQ-GCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTT-TCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred CCCceEEECCCCccccchhh-hhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC
Confidence 36899999999999987776 8999999999999999999865 3 6899999999999999999867764 8889999
Q ss_pred CEEEeecccccccCCccccCCCccCeeecccccccccCCCC-CCCCcceEecccccccccCCC-CCcccCcCcccccCCC
Q 005999 149 TILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL-NQPFLVVFNVSGNNLTGQVPE-TPTLLKFDASSFSMNP 226 (665)
Q Consensus 149 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~ 226 (665)
+.|+|++|+|++.+|..+. ++|+.|+|++|+++.+++.. .+++|+.|++++|+|++.++. ...+.+|..+++++||
T Consensus 431 ~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~ 508 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNP 508 (562)
T ss_dssp CEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCC
T ss_pred CEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCC
Confidence 9999999999988887665 79999999999999776665 889999999999999965544 4678889999999999
Q ss_pred CCCCCCC
Q 005999 227 NLCGKVI 233 (665)
Q Consensus 227 ~lc~~~~ 233 (665)
+.|+|+.
T Consensus 509 ~~c~c~~ 515 (562)
T 3a79_B 509 WDCTCPG 515 (562)
T ss_dssp BCCCHHH
T ss_pred cCCCcch
Confidence 9998864
No 300
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.70 E-value=3.2e-17 Score=185.14 Aligned_cols=149 Identities=17% Similarity=0.153 Sum_probs=131.9
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 75 RVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 75 ~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
.++.|++++|.+. .+|+..+.++++|+.|+|++|.|++.+| .|+.+++|++|+|++|.|++..|..|+++++|++|+|
T Consensus 52 ~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 52 NQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 5788999999988 6888788999999999999999999998 8999999999999999999888888999999999999
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCCCcccCcCcccccCCC
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNP 226 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 226 (665)
++|.|++..+..|.++++|+.|+|++|.+++.+|.. .+++|++|++++|+|++..+ ..+.+|..+++++|.
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~l~~L~~L~l~~n~ 203 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDL--SLIPSLFHANVSYNL 203 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCG--GGCTTCSEEECCSSC
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcCh--hhhhhhhhhhcccCc
Confidence 999999666666799999999999999999998864 88999999999999997533 566777777777763
No 301
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=2.5e-17 Score=158.30 Aligned_cols=147 Identities=18% Similarity=0.237 Sum_probs=129.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
.+++.|+|++|+++ .+| .+..+++|+.|+|++|.++.. +.+..+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT--GIEYAHNIKDLTINNIHATNY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCSCC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCCcc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 57899999999999 777 489999999999999977644 47889999999999999999888999999999999999
Q ss_pred ecccccccCCccccCCCccCeeeccccc-ccccCCCC-CCCCcceEecccccccccCCCCCcccCcCcccccCCC
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNR-FSGTVPPL-NQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNP 226 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~-~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 226 (665)
++|++++..|..+..+++|+.|++++|+ ++..+ .. .+++|+.|++++|++++ ++....+.+|..+++++|+
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YRGIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CTTGGGCSSCCEEEECBC-
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hHHhccCCCCCEEEeeCcc
Confidence 9999998888999999999999999998 66554 44 88999999999999996 4456778889999999986
No 302
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.70 E-value=4.1e-17 Score=185.27 Aligned_cols=136 Identities=21% Similarity=0.162 Sum_probs=123.4
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
..++.|||++|+|+ .|++..|.++++|++|+|++|+|++++| .|.+|++|++|+|++|+|++..|..|.+|++|++|+
T Consensus 52 ~~~~~LdLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 52 FSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred cCCCEEEeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 36899999999999 6887799999999999999999999988 799999999999999999977777899999999999
Q ss_pred eecccccccCCccccCCCccCeeeccccccccc-CCCC--CCCCcceEecccccccccCCC
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGT-VPPL--NQPFLVVFNVSGNNLTGQVPE 210 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~--~~~~L~~l~l~~N~l~~~~p~ 210 (665)
|++|+|++..+..|+++++|+.|+|++|++++. +|.. .+++|++|++++|+|++..|.
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 191 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccc
Confidence 999999987777899999999999999999875 3443 789999999999999987763
No 303
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.69 E-value=2.9e-17 Score=185.83 Aligned_cols=157 Identities=23% Similarity=0.267 Sum_probs=86.4
Q ss_pred EEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCc---CcccccCCCCCCEE
Q 005999 76 VVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGA---FPLSILSLHRLTIL 151 (665)
Q Consensus 76 v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L 151 (665)
++.|+|++|.+.+..++..+..+++|+.|+|++|.+++.+| .+..+++|++|+|++|++++. .+..+..+++|+.|
T Consensus 402 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L 481 (606)
T 3t6q_A 402 LELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEIL 481 (606)
T ss_dssp CSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEE
T ss_pred CCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEE
Confidence 44444444444433333234444555555555555544444 344555555555555555431 12345555555555
Q ss_pred EeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCC-CcccCcCcccccCCCCC
Q 005999 152 DLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPET-PTLLKFDASSFSMNPNL 228 (665)
Q Consensus 152 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~-~~l~~l~~~~~~~n~~l 228 (665)
+|++|++++..|..|..+++|+.|+|++|++++.+|.. .++.| .|++++|++++.+|.. ..+.+|..+++++||+.
T Consensus 482 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 560 (606)
T 3t6q_A 482 VLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLD 560 (606)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEE
T ss_pred ECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcc
Confidence 55555555555555566666666666666666555543 55556 6666666666555532 44567788888888888
Q ss_pred CCCCC
Q 005999 229 CGKVI 233 (665)
Q Consensus 229 c~~~~ 233 (665)
|+|..
T Consensus 561 c~c~~ 565 (606)
T 3t6q_A 561 CTCSN 565 (606)
T ss_dssp CSGGG
T ss_pred ccCCc
Confidence 87753
No 304
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.69 E-value=5.4e-17 Score=178.13 Aligned_cols=160 Identities=21% Similarity=0.172 Sum_probs=134.1
Q ss_pred ccceeecC-----------CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcc
Q 005999 66 WQGVKCAQ-----------GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNF 133 (665)
Q Consensus 66 w~gv~C~~-----------~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~ 133 (665)
|..|.|.. ..++.|+|++|++++ +++..|.++++|++|+|++|.+++..| .|.++++|++|+|++|+
T Consensus 13 ~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKT-LNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccce-ECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 66788863 368899999999995 555589999999999999999999887 79999999999999999
Q ss_pred cCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCC-
Q 005999 134 FSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPE- 210 (665)
Q Consensus 134 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~- 210 (665)
+++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|++|++++..+.. .+++|+.|++++|++++..+.
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 171 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 171 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhH
Confidence 99555566889999999999999999888889999999999999999999887754 788899999999998865442
Q ss_pred CCcccCcCcccccCCC
Q 005999 211 TPTLLKFDASSFSMNP 226 (665)
Q Consensus 211 ~~~l~~l~~~~~~~n~ 226 (665)
...+.+|..+++++|.
T Consensus 172 l~~l~~L~~L~l~~n~ 187 (477)
T 2id5_A 172 LSHLHGLIVLRLRHLN 187 (477)
T ss_dssp HTTCTTCCEEEEESCC
T ss_pred hcccCCCcEEeCCCCc
Confidence 2456677777777764
No 305
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.69 E-value=6.6e-17 Score=172.66 Aligned_cols=150 Identities=17% Similarity=0.155 Sum_probs=132.4
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
..++.|+++++.+. .+|+..+..+++|++|+|++|.+++.++ .|..+++|++|+|++|++++..|..|.++++|++|+
T Consensus 45 ~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 45 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp CCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 36888999999998 7888778999999999999999999988 899999999999999999988888899999999999
Q ss_pred eecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCCCcccCcCcccccCCC
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNP 226 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 226 (665)
|++|+|+...+..|.++++|+.|++++|++++.++.. .+++|+.|++++|++++.. ...+.+|..+++++|.
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNL 197 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSSC
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc--cccccccceeeccccc
Confidence 9999999544445689999999999999999988864 7899999999999999753 2567778888887774
No 306
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.69 E-value=4.6e-17 Score=180.68 Aligned_cols=157 Identities=22% Similarity=0.161 Sum_probs=133.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccC--CC-CCCCCCCCCEEEccCcccCCcCccc-ccCCCCCC
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGP--IP-DLSSLINLKSLSLSRNFFSGAFPLS-ILSLHRLT 149 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~--~p-~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~ 149 (665)
..++.|+|++|.+++.+|. .+..+++|+.|+|++|++++. +| .++.+++|++|+|++|++++.+|.. +..+++|+
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFE-NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCEEECCSSCCCTTTTT-TCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CcccEEEeECCccChhhhh-hhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 6789999999999977776 789999999999999999873 34 5889999999999999999767765 78889999
Q ss_pred EEEeecccccccCCccccCCCccCeeecccccccccCCCC-CCCCcceEecccccccccCCC-CCcccCcCcccccCCCC
Q 005999 150 ILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL-NQPFLVVFNVSGNNLTGQVPE-TPTLLKFDASSFSMNPN 227 (665)
Q Consensus 150 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~~ 227 (665)
.|+|++|++++.+|..+. ++|+.|+|++|+++.+++.. .+++|+.|++++|+|++.++. ...+.+|..+++++|++
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~ 480 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPW 480 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCC
Confidence 999999999888887665 78999999999999655544 889999999999999954443 45678899999999999
Q ss_pred CCCCCC
Q 005999 228 LCGKVI 233 (665)
Q Consensus 228 lc~~~~ 233 (665)
.|+|++
T Consensus 481 ~c~c~~ 486 (520)
T 2z7x_B 481 DCSCPR 486 (520)
T ss_dssp CCCHHH
T ss_pred cccCCc
Confidence 998864
No 307
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.68 E-value=7e-17 Score=183.37 Aligned_cols=161 Identities=20% Similarity=0.198 Sum_probs=143.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccC-CcCcccccCCCCCCEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFS-GAFPLSILSLHRLTIL 151 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L 151 (665)
..++.+++..+++....+...+..+++|+.+++++|.+.+..+ .+..+++|+.|+|++|++. +.+|..|..+++|+.|
T Consensus 420 ~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L 499 (635)
T 4g8a_A 420 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 499 (635)
T ss_dssp TTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred ccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEE
Confidence 4677888888888777776688999999999999999999988 7889999999999999854 4678899999999999
Q ss_pred EeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCC-Ccc-cCcCcccccCCCC
Q 005999 152 DLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPET-PTL-LKFDASSFSMNPN 227 (665)
Q Consensus 152 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~-~~l-~~l~~~~~~~n~~ 227 (665)
||++|+|++..|..|.++++|+.|+|++|+|++.+|.. .+++|++|+|++|+|++.+|.. ..+ .+|..+++++||+
T Consensus 500 ~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~ 579 (635)
T 4g8a_A 500 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579 (635)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCB
T ss_pred ECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCC
Confidence 99999999999999999999999999999999998864 7899999999999999988854 344 5789999999999
Q ss_pred CCCCCCC
Q 005999 228 LCGKVIN 234 (665)
Q Consensus 228 lc~~~~~ 234 (665)
.|+|.+.
T Consensus 580 ~C~C~~~ 586 (635)
T 4g8a_A 580 ACTCEHQ 586 (635)
T ss_dssp CCSGGGH
T ss_pred cccCCcH
Confidence 9999753
No 308
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.68 E-value=8.5e-18 Score=193.26 Aligned_cols=180 Identities=19% Similarity=0.157 Sum_probs=110.9
Q ss_pred CCCCCHHHHHHHHHHHhcCCCCCCc-cccCC-CCCCCccccceeecCCCEEEEEecCCCCcc------------------
Q 005999 29 TNSLLPSDAVSLLSFKSKADSENKL-LYALN-ERFDYCQWQGVKCAQGRVVRFVLQSFGLRG------------------ 88 (665)
Q Consensus 29 ~~~~~~~~~~~Ll~~k~~~~~~~~~-~~~~~-~~~~~C~w~gv~C~~~~v~~l~l~~~~l~g------------------ 88 (665)
+.+....++.+|+++.......... ...|. ..+..+.|.++.++..+++.|+|.+|++..
T Consensus 126 s~s~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~ 205 (727)
T 4b8c_D 126 SKSLVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDE 205 (727)
T ss_dssp ------CCCHHHHHHHHHHHHHHTTC------------------------------------------------------
T ss_pred hhhccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccC
Confidence 4456667899999998665322111 22232 234567899988887777776665544431
Q ss_pred --------cCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccccc
Q 005999 89 --------TFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTG 160 (665)
Q Consensus 89 --------~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 160 (665)
.++++.+..+++|+.|+|++|.|..+++.+.++++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+
T Consensus 206 ~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 206 DDDIENRMVMPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred ccccccceecChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 13355688889999999999999866667778999999999999999 88999999999999999999999
Q ss_pred cCCccccCCCccCeeecccccccccCCCC-CCCCcceEecccccccccCCC
Q 005999 161 LIPVNLTALDRLYSLKLEWNRFSGTVPPL-NQPFLVVFNVSGNNLTGQVPE 210 (665)
Q Consensus 161 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~l~~~~p~ 210 (665)
.+|..|+.|++|+.|+|++|.|+.++..+ .+++|+.|+|++|+|++.+|.
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLK 334 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHH
T ss_pred ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChH
Confidence 78989999999999999999998665555 788999999999999988774
No 309
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.68 E-value=9.5e-17 Score=181.64 Aligned_cols=152 Identities=20% Similarity=0.177 Sum_probs=132.3
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
.+++.|+|++|++++ +++..|.++++|++|+|++|++++++| .|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKI-LKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCE-eChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 479999999999995 555589999999999999999999988 799999999999999999988899999999999999
Q ss_pred eecccccccCCccccCCCccCeeecccccccc-cCCC-C-CCCCcceEecccccccccCCCC-CcccCcC----cccccC
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFSG-TVPP-L-NQPFLVVFNVSGNNLTGQVPET-PTLLKFD----ASSFSM 224 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~~~-~-~~~~L~~l~l~~N~l~~~~p~~-~~l~~l~----~~~~~~ 224 (665)
|++|++++..|..++++++|++|++++|++++ .+|. + .+++|++|++++|++++..|.. ..+.++. .+++++
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 99999998887899999999999999999987 4455 3 8899999999999999887743 3344443 567777
Q ss_pred CC
Q 005999 225 NP 226 (665)
Q Consensus 225 n~ 226 (665)
|+
T Consensus 191 n~ 192 (606)
T 3vq2_A 191 NP 192 (606)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 310
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=5.8e-17 Score=151.43 Aligned_cols=132 Identities=27% Similarity=0.230 Sum_probs=118.6
Q ss_pred CCEEEEEecCCCCc-ccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 74 GRVVRFVLQSFGLR-GTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 74 ~~v~~l~l~~~~l~-g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
.+++.|+|++|+++ +.+|. .+..+++|+.|+|++|.|++. +.+..+++|++|+|++|++++.+|..+.++++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEG-LTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSS-CCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHH-HHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 57999999999998 78887 689999999999999999988 8899999999999999999987898888899999999
Q ss_pred eecccccccC-CccccCCCccCeeecccccccccCC----CC-CCCCcceEeccccccccc
Q 005999 153 LSYNNLTGLI-PVNLTALDRLYSLKLEWNRFSGTVP----PL-NQPFLVVFNVSGNNLTGQ 207 (665)
Q Consensus 153 L~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~----~~-~~~~L~~l~l~~N~l~~~ 207 (665)
|++|+|++.. +..+..+++|+.|++++|++++.++ .+ .+++|++|++++|.+...
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 9999999642 2789999999999999999998887 33 789999999999998843
No 311
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.68 E-value=8.4e-17 Score=180.56 Aligned_cols=158 Identities=23% Similarity=0.231 Sum_probs=141.7
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC--CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP--DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTIL 151 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 151 (665)
..++.|+|++|.+. .+++ .+..+++|+.|+|++|.+++.+| .+.++++|++|+|++|.+++.+|..|.++++|+.|
T Consensus 373 ~~L~~L~l~~n~l~-~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 450 (570)
T 2z63_A 373 TSLKYLDLSFNGVI-TMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450 (570)
T ss_dssp SCCCEEECCSCSEE-EEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CccCEEECCCCccc-cccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE
Confidence 57888888888888 4666 48999999999999999998877 68999999999999999999999999999999999
Q ss_pred Eeeccccc-ccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCC-CcccCcCcccccCCCC
Q 005999 152 DLSYNNLT-GLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPET-PTLLKFDASSFSMNPN 227 (665)
Q Consensus 152 ~L~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~-~~l~~l~~~~~~~n~~ 227 (665)
+|++|+++ +.+|..+..+++|+.|+|++|++++.+|.. .+++|+.|++++|++++.+|.. ..+.+|..+++++|++
T Consensus 451 ~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~ 530 (570)
T 2z63_A 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPW 530 (570)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred ECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcc
Confidence 99999998 689999999999999999999999997764 7899999999999999887753 5778899999999999
Q ss_pred CCCCCC
Q 005999 228 LCGKVI 233 (665)
Q Consensus 228 lc~~~~ 233 (665)
.|.|+.
T Consensus 531 ~~~~~~ 536 (570)
T 2z63_A 531 DCSCPR 536 (570)
T ss_dssp CCCTTT
T ss_pred cCCCcc
Confidence 998763
No 312
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.67 E-value=3.9e-17 Score=179.44 Aligned_cols=150 Identities=24% Similarity=0.182 Sum_probs=95.6
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCC-----------------CCCCCCCCEEEccCcccCC
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPD-----------------LSSLINLKSLSLSRNFFSG 136 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~-----------------~~~l~~L~~L~Ls~N~l~~ 136 (665)
..++.|+|++|.+++..| +..+++|+.|+|++|.|++.++. ...+++|+.|+|++|.|++
T Consensus 58 ~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~ 134 (487)
T 3oja_A 58 TKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITM 134 (487)
T ss_dssp TTCCEEECTTSCCEEEEE---CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCS
T ss_pred CCCCEEEeeCCCCCCCcc---cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCC
Confidence 456666666666664322 66666666666666666554321 0124555666666666666
Q ss_pred cCcccccCCCCCCEEEeecccccccCCcccc-CCCccCeeecccccccccCCCCCCCCcceEecccccccccCCCCCccc
Q 005999 137 AFPLSILSLHRLTILDLSYNNLTGLIPVNLT-ALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPETPTLL 215 (665)
Q Consensus 137 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~~~l~ 215 (665)
..|..|+++++|+.|+|++|.|++.+|..+. .+++|+.|+|++|.|++.++...+++|+.|+|++|+|++.+|....+.
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~ 214 (487)
T 3oja_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGPEFQSAA 214 (487)
T ss_dssp GGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEECGGGGGGT
T ss_pred CCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECCCCCCCCCCHhHcCCC
Confidence 6666666777777777777777766666664 567777777777777766555566777777777777776666555666
Q ss_pred CcCcccccCCC
Q 005999 216 KFDASSFSMNP 226 (665)
Q Consensus 216 ~l~~~~~~~n~ 226 (665)
+|..+++++|.
T Consensus 215 ~L~~L~Ls~N~ 225 (487)
T 3oja_A 215 GVTWISLRNNK 225 (487)
T ss_dssp TCSEEECTTSC
T ss_pred CccEEEecCCc
Confidence 67777776664
No 313
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.67 E-value=1.3e-16 Score=183.17 Aligned_cols=158 Identities=23% Similarity=0.293 Sum_probs=125.4
Q ss_pred CEEEEEecCCCCc--ccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcC----c----cccc
Q 005999 75 RVVRFVLQSFGLR--GTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAF----P----LSIL 143 (665)
Q Consensus 75 ~v~~l~l~~~~l~--g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~----p----~~~~ 143 (665)
.++.|++++|.+. +.+|. .+.++++|+.|+|++|+|+++++ .|.++++|++|+|++|++++.. | ..|.
T Consensus 455 ~L~~L~l~~n~l~~~~~~p~-~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~ 533 (680)
T 1ziw_A 455 SLQRLMLRRVALKNVDSSPS-PFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLK 533 (680)
T ss_dssp TCCEEECTTSCCBCTTCSSC-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTT
T ss_pred ccccchhccccccccccCCc-ccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhc
Confidence 3444455555444 34444 68888899999999999998887 5888999999999999988532 1 2378
Q ss_pred CCCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCCC--cccCcCc
Q 005999 144 SLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPETP--TLLKFDA 219 (665)
Q Consensus 144 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~~--~l~~l~~ 219 (665)
++++|+.|+|++|+|+...+..|.++++|+.|+|++|++++.++.. .+++|+.|++++|+|++.+|... .+.+|..
T Consensus 534 ~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~ 613 (680)
T 1ziw_A 534 GLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTE 613 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSE
T ss_pred CCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCE
Confidence 8899999999999999444456899999999999999999888765 78899999999999998766432 5778999
Q ss_pred ccccCCCCCCCCCC
Q 005999 220 SSFSMNPNLCGKVI 233 (665)
Q Consensus 220 ~~~~~n~~lc~~~~ 233 (665)
+++++||+.|+|..
T Consensus 614 l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 614 LDMRFNPFDCTCES 627 (680)
T ss_dssp EECTTCCCCBCCCC
T ss_pred EEccCCCcccCCcc
Confidence 99999999999874
No 314
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=2.4e-16 Score=150.82 Aligned_cols=127 Identities=25% Similarity=0.240 Sum_probs=108.1
Q ss_pred EEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeeccc
Q 005999 78 RFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNN 157 (665)
Q Consensus 78 ~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 157 (665)
.+++++|+|+ .+|. .+ .++|+.|+|++|+|+.++..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~-~~--~~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPK-GI--PRDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCS-CC--CTTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCC-CC--CCCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4677888888 7886 34 368999999999999666689999999999999999997777889999999999999999
Q ss_pred ccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccC
Q 005999 158 LTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQV 208 (665)
Q Consensus 158 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~ 208 (665)
|++..|..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|++.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 99888888999999999999999999887753 6788888888888887543
No 315
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=2.2e-16 Score=151.04 Aligned_cols=130 Identities=22% Similarity=0.325 Sum_probs=117.0
Q ss_pred cEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeeccccc
Q 005999 102 RVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNR 181 (665)
Q Consensus 102 ~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 181 (665)
+.+++++|+|+.++..+. ++|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 679999999997766553 68999999999999 899999999999999999999998888899999999999999999
Q ss_pred ccccCCCC--CCCCcceEecccccccccCCC-CCcccCcCcccccCCCCCCCCCCC
Q 005999 182 FSGTVPPL--NQPFLVVFNVSGNNLTGQVPE-TPTLLKFDASSFSMNPNLCGKVIN 234 (665)
Q Consensus 182 l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~~lc~~~~~ 234 (665)
|++.++.. .+++|++|+|++|+|++.++. ...+.+|..+++++||+.|+|.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~ 145 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQ 145 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGH
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCH
Confidence 99998864 889999999999999976664 356888999999999999998754
No 316
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.67 E-value=3.2e-17 Score=180.07 Aligned_cols=153 Identities=16% Similarity=0.126 Sum_probs=131.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCccccc-CCCCCCEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSIL-SLHRLTIL 151 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L 151 (665)
..++.|+|++|.+++. ++ ..+++|+.|+|++|.|++.+| .|+++++|+.|+|++|.|++.+|..+. .+++|+.|
T Consensus 99 ~~L~~L~L~~N~l~~~-~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L 174 (487)
T 3oja_A 99 PSIETLHAANNNISRV-SC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (487)
T ss_dssp TTCCEEECCSSCCCCE-EE---CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECcCCcCCCC-Cc---cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEE
Confidence 4566666666666643 32 246889999999999999988 899999999999999999998998887 79999999
Q ss_pred EeecccccccCCccccCCCccCeeecccccccccCCCC-CCCCcceEecccccccccCCCCCcccCcCcccccCCCCCCC
Q 005999 152 DLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL-NQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNPNLCG 230 (665)
Q Consensus 152 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~lc~ 230 (665)
+|++|.|++. | .+..+++|+.|+|++|+|++.+|.+ .+++|+.|+|++|+|++.++....+.+|..+++++|+..|+
T Consensus 175 ~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 175 NLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp ECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHH
T ss_pred ecCCCccccc-c-ccccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCc
Confidence 9999999976 3 3456999999999999999998887 88999999999999998666667788999999999999987
Q ss_pred CC
Q 005999 231 KV 232 (665)
Q Consensus 231 ~~ 232 (665)
+.
T Consensus 253 ~~ 254 (487)
T 3oja_A 253 TL 254 (487)
T ss_dssp HH
T ss_pred ch
Confidence 53
No 317
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.67 E-value=2.3e-17 Score=170.64 Aligned_cols=153 Identities=22% Similarity=0.199 Sum_probs=112.3
Q ss_pred CCEEEEEecCCCCcccCCcccc-CCCCCCcEEEccCCcCccCCCCCCCC-----CCCCEEEccCcccCCcCcccccCCCC
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTL-TRLDQLRVLSLHNNSLTGPIPDLSSL-----INLKSLSLSRNFFSGAFPLSILSLHR 147 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~-~~l~~L~~L~L~~N~l~~~~p~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~ 147 (665)
.+++.|+|++|++++.+|...+ ..+++|++|+|++|+|++.++.++.+ ++|++|+|++|++++..|..|+++++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 5788888888888877776322 78888888888888888874355555 78888888888888777788888888
Q ss_pred CCEEEeeccccccc--CCccc--cCCCccCeeecccccccccCC---CC--CCCCcceEecccccccccCC--CCCcccC
Q 005999 148 LTILDLSYNNLTGL--IPVNL--TALDRLYSLKLEWNRFSGTVP---PL--NQPFLVVFNVSGNNLTGQVP--ETPTLLK 216 (665)
Q Consensus 148 L~~L~L~~N~l~~~--~p~~~--~~l~~L~~L~l~~N~l~~~~~---~~--~~~~L~~l~l~~N~l~~~~p--~~~~l~~ 216 (665)
|++|+|++|++.+. +|..+ ..+++|+.|+|++|++++... .. .+++|+.|++++|+|++.+| ....+.+
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 254 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQ 254 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTT
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCC
Confidence 88888888887765 33344 778888888888888874321 21 56788888888888887654 2344667
Q ss_pred cCcccccCCC
Q 005999 217 FDASSFSMNP 226 (665)
Q Consensus 217 l~~~~~~~n~ 226 (665)
|..+++++|.
T Consensus 255 L~~L~Ls~N~ 264 (312)
T 1wwl_A 255 LNSLNLSFTG 264 (312)
T ss_dssp CCEEECTTSC
T ss_pred CCEEECCCCc
Confidence 7778887774
No 318
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.67 E-value=7.1e-17 Score=166.76 Aligned_cols=150 Identities=19% Similarity=0.181 Sum_probs=84.6
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCcc---CCC--CCCCCCCCCEEEccCcccCCcCcc----cccC
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTG---PIP--DLSSLINLKSLSLSRNFFSGAFPL----SILS 144 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~---~~p--~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~ 144 (665)
.+++.|+|++|++.+ +++..++.+++|++|+|++|++.+ .++ .++.+++|++|+|++|+++ .+|. .+.+
T Consensus 145 ~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~ 222 (310)
T 4glp_A 145 PGLKVLSIAQAHSPA-FSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAA 222 (310)
T ss_dssp SCCCEEEEECCSSCC-CCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHH
T ss_pred cCCCEEEeeCCCcch-hhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhc
Confidence 356666666666653 333356666666666666666544 222 2355666666666666665 3333 1345
Q ss_pred CCCCCEEEeecccccccCCccccCC---CccCeeecccccccccCCCCCCCCcceEecccccccccCCCCCcccCcCccc
Q 005999 145 LHRLTILDLSYNNLTGLIPVNLTAL---DRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPETPTLLKFDASS 221 (665)
Q Consensus 145 l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~ 221 (665)
+++|++|||++|+|++..|..+..+ ++|+.|+|++|+|+.. |....++|+.|+|++|+|++. |....+++|..++
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~l-p~~~~~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~ 300 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQV-PKGLPAKLRVLDLSSNRLNRA-PQPDELPEVDNLT 300 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSC-CSCCCSCCSCEECCSCCCCSC-CCTTSCCCCSCEE
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCch-hhhhcCCCCEEECCCCcCCCC-chhhhCCCccEEE
Confidence 5666666666666665556555554 4666666666666643 322235666666666666653 2234555666666
Q ss_pred ccCCCC
Q 005999 222 FSMNPN 227 (665)
Q Consensus 222 ~~~n~~ 227 (665)
+++|+.
T Consensus 301 L~~N~l 306 (310)
T 4glp_A 301 LDGNPF 306 (310)
T ss_dssp CSSTTT
T ss_pred CcCCCC
Confidence 666653
No 319
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.66 E-value=1.4e-16 Score=180.28 Aligned_cols=152 Identities=18% Similarity=0.097 Sum_probs=133.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
..++.|+|++|.+++ +++..|+++++|++|+|++|++++..| .|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 33 ~~l~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 33 NSTECLEFSFNVLPT-IQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp TTCCEEECTTCCCSE-ECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred CcCcEEEccCCccCc-CChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 479999999999995 655689999999999999999999988 799999999999999999988999999999999999
Q ss_pred eecccccccCCccccCCCccCeeecccccccccC-CCC-CCCCcceEecccccccccCCCC-CcccCcC--cccccCCC
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTV-PPL-NQPFLVVFNVSGNNLTGQVPET-PTLLKFD--ASSFSMNP 226 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~-~~~~L~~l~l~~N~l~~~~p~~-~~l~~l~--~~~~~~n~ 226 (665)
|++|++++..|..+.++++|++|++++|++++.. |.. .+++|+.|++++|++++..|.. ..+.++. .+++++|.
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~ 190 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGND 190 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCC
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCc
Confidence 9999999877888999999999999999999853 444 7899999999999999876632 3455565 56677764
No 320
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.66 E-value=7e-17 Score=166.98 Aligned_cols=150 Identities=21% Similarity=0.174 Sum_probs=104.0
Q ss_pred CCCEEEEEecCCCCcccCCccccCCC-----CCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCc--Ccccc--
Q 005999 73 QGRVVRFVLQSFGLRGTFPPNTLTRL-----DQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGA--FPLSI-- 142 (665)
Q Consensus 73 ~~~v~~l~l~~~~l~g~l~~~~~~~l-----~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~--~p~~~-- 142 (665)
..+++.|+|++|++++. |. .++.+ ++|++|+|++|+|++.+| .|+++++|++|+|++|++.+. +|..+
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~-~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 197 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DA-WLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCP 197 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SS-HHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCT
T ss_pred CCCccEEEccCCCCcch-hH-HHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHh
Confidence 35788888888888854 53 56666 788888888888887776 677888888888888887765 34444
Q ss_pred cCCCCCCEEEeecccccc--cCC-ccccCCCccCeeecccccccccCCC--C-CCCCcceEecccccccccCCCCCcccC
Q 005999 143 LSLHRLTILDLSYNNLTG--LIP-VNLTALDRLYSLKLEWNRFSGTVPP--L-NQPFLVVFNVSGNNLTGQVPETPTLLK 216 (665)
Q Consensus 143 ~~l~~L~~L~L~~N~l~~--~~p-~~~~~l~~L~~L~l~~N~l~~~~~~--~-~~~~L~~l~l~~N~l~~~~p~~~~l~~ 216 (665)
.++++|++|+|++|+|++ .++ ..+..+++|+.|+|++|++++.+|. . .+++|++|++++|+|+ .+|.... .+
T Consensus 198 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-~~ 275 (312)
T 1wwl_A 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-AK 275 (312)
T ss_dssp TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-SE
T ss_pred ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-CC
Confidence 677888888888888772 222 2335667788888888888776642 2 4577778888888777 4453222 56
Q ss_pred cCcccccCCC
Q 005999 217 FDASSFSMNP 226 (665)
Q Consensus 217 l~~~~~~~n~ 226 (665)
|..+++++|.
T Consensus 276 L~~L~Ls~N~ 285 (312)
T 1wwl_A 276 LSVLDLSYNR 285 (312)
T ss_dssp EEEEECCSSC
T ss_pred ceEEECCCCC
Confidence 6777777764
No 321
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.66 E-value=5.4e-17 Score=184.45 Aligned_cols=152 Identities=21% Similarity=0.312 Sum_probs=138.7
Q ss_pred CCEEEEEecCCCCccc-----------------CCccccC--CCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcc
Q 005999 74 GRVVRFVLQSFGLRGT-----------------FPPNTLT--RLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNF 133 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~-----------------l~~~~~~--~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~ 133 (665)
.+++.|+|++|.++|. +|+ .++ ++++|++|+|++|++.+.+| .|+++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~-~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTE-DLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCch-hhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 6899999999999986 887 789 99999999999999999998 89999999999999999
Q ss_pred -cCC-cCcccccCC------CCCCEEEeecccccccCCc--cccCCCccCeeecccccccccCCCC-CCCCcceEecccc
Q 005999 134 -FSG-AFPLSILSL------HRLTILDLSYNNLTGLIPV--NLTALDRLYSLKLEWNRFSGTVPPL-NQPFLVVFNVSGN 202 (665)
Q Consensus 134 -l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N 202 (665)
++| .+|..++++ ++|+.|+|++|+++ .+|. .++++++|+.|++++|+++|.+|.+ .+++|+.|++++|
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYN 363 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCC
Confidence 998 899999887 99999999999999 8998 8999999999999999999888855 7889999999999
Q ss_pred cccccCCCCCcccC-cCcccccCCCC
Q 005999 203 NLTGQVPETPTLLK-FDASSFSMNPN 227 (665)
Q Consensus 203 ~l~~~~p~~~~l~~-l~~~~~~~n~~ 227 (665)
+++..+.....+.+ |..+++++|..
T Consensus 364 ~l~~lp~~l~~l~~~L~~L~Ls~N~l 389 (636)
T 4eco_A 364 QITEIPANFCGFTEQVENLSFAHNKL 389 (636)
T ss_dssp EEEECCTTSEEECTTCCEEECCSSCC
T ss_pred ccccccHhhhhhcccCcEEEccCCcC
Confidence 99944444567788 99999999864
No 322
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=7.9e-17 Score=147.29 Aligned_cols=126 Identities=28% Similarity=0.261 Sum_probs=109.3
Q ss_pred CCEEEEEecCCCCc-ccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 74 GRVVRFVLQSFGLR-GTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 74 ~~v~~l~l~~~~l~-g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
.+++.|++++|+++ +.+|. .+..+++|+.|+|++|.+++. +.++++++|++|+|++|++++.+|..+.++++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 57889999999998 78887 789999999999999999988 7788999999999999999977888888899999999
Q ss_pred eeccccccc-CCccccCCCccCeeecccccccccCC---C-C-CCCCcceEeccc
Q 005999 153 LSYNNLTGL-IPVNLTALDRLYSLKLEWNRFSGTVP---P-L-NQPFLVVFNVSG 201 (665)
Q Consensus 153 L~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~~---~-~-~~~~L~~l~l~~ 201 (665)
|++|++++. .|..+..+++|+.|++++|++++.++ . + .+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999863 34788999999999999999998877 2 2 778888888764
No 323
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.66 E-value=4.8e-16 Score=161.99 Aligned_cols=159 Identities=19% Similarity=0.249 Sum_probs=127.2
Q ss_pred CCccccceeecC-----------CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEc
Q 005999 62 DYCQWQGVKCAQ-----------GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSL 129 (665)
Q Consensus 62 ~~C~w~gv~C~~-----------~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L 129 (665)
..|.|+.+.|.. ..++.|+|++|+++ .+++..|.++++|++|+|++|++++..| .|+++++|++|+|
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCC-EeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 357899999973 36889999999999 5666689999999999999999999977 8999999999999
Q ss_pred cCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccc--cCCCC--CCCCcceEeccccccc
Q 005999 130 SRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSG--TVPPL--NQPFLVVFNVSGNNLT 205 (665)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~--~~~~L~~l~l~~N~l~ 205 (665)
++|+++ .+|..+. ++|++|+|++|++++..+..+.++++|+.|++++|+++. ..+.. .+++|+.|++++|+++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 999998 7787765 788888888888887777778888888888888888864 44433 6777888888888877
Q ss_pred ccCCCCCcccCcCcccccCCC
Q 005999 206 GQVPETPTLLKFDASSFSMNP 226 (665)
Q Consensus 206 ~~~p~~~~l~~l~~~~~~~n~ 226 (665)
..+.. ...+|..+++++|.
T Consensus 185 ~l~~~--~~~~L~~L~l~~n~ 203 (330)
T 1xku_A 185 TIPQG--LPPSLTELHLDGNK 203 (330)
T ss_dssp SCCSS--CCTTCSEEECTTSC
T ss_pred cCCcc--ccccCCEEECCCCc
Confidence 53321 22566777777664
No 324
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.66 E-value=4.2e-16 Score=164.53 Aligned_cols=154 Identities=25% Similarity=0.184 Sum_probs=132.0
Q ss_pred cceeecCCCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCC-CCCCCCEEEccCcccCCcCcccccC
Q 005999 67 QGVKCAQGRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLS-SLINLKSLSLSRNFFSGAFPLSILS 144 (665)
Q Consensus 67 ~gv~C~~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~ 144 (665)
.+..|.. ..+++++++|+ .+|. .+. ..|+.|+|++|+|+++++ .|. ++++|+.|+|++|+|++..|..|.+
T Consensus 14 ~~C~C~~---~~l~c~~~~l~-~iP~-~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~ 86 (361)
T 2xot_A 14 ANCLCAS---NILSCSKQQLP-NVPQ-SLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVP 86 (361)
T ss_dssp TTCEEET---TEEECCSSCCS-SCCS-SCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTT
T ss_pred CCCEECC---CEEEeCCCCcC-ccCc-cCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccC
Confidence 4567764 36899999999 6886 343 468999999999999988 576 9999999999999999877788999
Q ss_pred CCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCC----CcccCcC
Q 005999 145 LHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPET----PTLLKFD 218 (665)
Q Consensus 145 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~----~~l~~l~ 218 (665)
+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|.. .+++|+.|+|++|+|++..+.. ..+.+|.
T Consensus 87 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~ 166 (361)
T 2xot_A 87 VPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLM 166 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCC
T ss_pred CCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCC
Confidence 999999999999999887888999999999999999999987764 8899999999999999755433 3578889
Q ss_pred cccccCCCC
Q 005999 219 ASSFSMNPN 227 (665)
Q Consensus 219 ~~~~~~n~~ 227 (665)
.+++++|..
T Consensus 167 ~L~L~~N~l 175 (361)
T 2xot_A 167 LLDLSSNKL 175 (361)
T ss_dssp EEECCSSCC
T ss_pred EEECCCCCC
Confidence 999998853
No 325
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.66 E-value=1.5e-16 Score=176.63 Aligned_cols=148 Identities=24% Similarity=0.250 Sum_probs=126.4
Q ss_pred CCCCc-----cccce-eecCCCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcc
Q 005999 60 RFDYC-----QWQGV-KCAQGRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNF 133 (665)
Q Consensus 60 ~~~~C-----~w~gv-~C~~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~ 133 (665)
+.++| .|.|+ .|..++++.|+|++|+|++ ||+ .+ +++|+.|+|++|+|+.++ ..+++|+.|+|++|+
T Consensus 39 ~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~-~l--~~~L~~L~Ls~N~l~~ip---~~l~~L~~L~Ls~N~ 111 (571)
T 3cvr_A 39 QALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPD-NL--PPQITVLEITQNALISLP---ELPASLEYLDACDNR 111 (571)
T ss_dssp TCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCS-CC--CTTCSEEECCSSCCSCCC---CCCTTCCEEECCSSC
T ss_pred cCCccccccchhhhccccccCCccEEEeCCCCCCc-cCH-hH--cCCCCEEECcCCCCcccc---cccCCCCEEEccCCC
Confidence 36778 79999 7988899999999999996 887 44 389999999999999554 568999999999999
Q ss_pred cCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCCCCCCcceEecccccccccCCCCCc
Q 005999 134 FSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPETPT 213 (665)
Q Consensus 134 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~~~ 213 (665)
|++ +|. |.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|+|+++++ .+++|+.|+|++|+|++ +|...
T Consensus 112 l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~--~l~~L~~L~Ls~N~L~~-lp~l~- 179 (571)
T 3cvr_A 112 LST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTMLPE--LPTSLEVLSVRNNQLTF-LPELP- 179 (571)
T ss_dssp CSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC--CCTTCCEEECCSSCCSC-CCCCC-
T ss_pred CCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcCCC--cCCCcCEEECCCCCCCC-cchhh-
Confidence 996 888 765 99999999999996 776 68999999999999998554 67899999999999997 55432
Q ss_pred ccCcCcccccCCCC
Q 005999 214 LLKFDASSFSMNPN 227 (665)
Q Consensus 214 l~~l~~~~~~~n~~ 227 (665)
.+|..+++++|..
T Consensus 180 -~~L~~L~Ls~N~L 192 (571)
T 3cvr_A 180 -ESLEALDVSTNLL 192 (571)
T ss_dssp -TTCCEEECCSSCC
T ss_pred -CCCCEEECcCCCC
Confidence 7888899988843
No 326
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.65 E-value=2.6e-16 Score=156.04 Aligned_cols=151 Identities=20% Similarity=0.150 Sum_probs=132.3
Q ss_pred CCEEEEEecCCC-CcccCCccccCCCCCCcEEEccC-CcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCC-
Q 005999 74 GRVVRFVLQSFG-LRGTFPPNTLTRLDQLRVLSLHN-NSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLT- 149 (665)
Q Consensus 74 ~~v~~l~l~~~~-l~g~l~~~~~~~l~~L~~L~L~~-N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~- 149 (665)
.+++.|+|++|+ ++ .+++..|.++++|+.|+|++ |+|+++++ .|.++++|++|+|++|++++ +|. |..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp TTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 689999999997 77 68877899999999999999 99999888 78999999999999999995 887 89999998
Q ss_pred --EEEeecc-cccccCCccccCCCccC-eeecccccccccCCCC-CCCCcceEeccccc-ccccCCCC-Ccc-cCcCccc
Q 005999 150 --ILDLSYN-NLTGLIPVNLTALDRLY-SLKLEWNRFSGTVPPL-NQPFLVVFNVSGNN-LTGQVPET-PTL-LKFDASS 221 (665)
Q Consensus 150 --~L~L~~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~-l~~~~p~~-~~l-~~l~~~~ 221 (665)
.|+|++| ++++..+..|..+++|+ .|++++|+++..++.. ..++|+.|++++|+ +++..+.. ..+ .+|..++
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~ 211 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLD 211 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEE
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEE
Confidence 9999999 99977777899999999 9999999999766654 45789999999995 99765543 456 7889999
Q ss_pred ccCCCC
Q 005999 222 FSMNPN 227 (665)
Q Consensus 222 ~~~n~~ 227 (665)
+++|+-
T Consensus 212 l~~N~l 217 (239)
T 2xwt_C 212 VSQTSV 217 (239)
T ss_dssp CTTCCC
T ss_pred CCCCcc
Confidence 988854
No 327
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.65 E-value=6.5e-16 Score=161.14 Aligned_cols=158 Identities=19% Similarity=0.258 Sum_probs=130.3
Q ss_pred CccccceeecC-----------CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEcc
Q 005999 63 YCQWQGVKCAQ-----------GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLS 130 (665)
Q Consensus 63 ~C~w~gv~C~~-----------~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls 130 (665)
.|.|+.+.|.. ..++.|+|++|+++ .+++..|.++++|++|+|++|++++..| .|+++++|++|+|+
T Consensus 32 ~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDIS-ELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cccCCEEECCCCCccccCCCCCCCCeEEECCCCcCC-ccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 37899999973 36899999999999 5666689999999999999999999988 79999999999999
Q ss_pred CcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccc--cCCCC-CCCCcceEeccccccccc
Q 005999 131 RNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSG--TVPPL-NQPFLVVFNVSGNNLTGQ 207 (665)
Q Consensus 131 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~-~~~~L~~l~l~~N~l~~~ 207 (665)
+|+++ .+|..+. ++|++|+|++|++++..+..+..+++|+.|++++|+++. ..+.. ...+|+.|++++|++++.
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l 187 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGI 187 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSC
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCcc
Confidence 99999 7887776 899999999999997766778999999999999999964 44443 222888999999998864
Q ss_pred CCCCCcccCcCcccccCCC
Q 005999 208 VPETPTLLKFDASSFSMNP 226 (665)
Q Consensus 208 ~p~~~~l~~l~~~~~~~n~ 226 (665)
+.. ...+|..+++++|.
T Consensus 188 ~~~--~~~~L~~L~l~~n~ 204 (332)
T 2ft3_A 188 PKD--LPETLNELHLDHNK 204 (332)
T ss_dssp CSS--SCSSCSCCBCCSSC
T ss_pred Ccc--ccCCCCEEECCCCc
Confidence 332 22577778887774
No 328
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.65 E-value=1.1e-16 Score=168.56 Aligned_cols=110 Identities=21% Similarity=0.264 Sum_probs=50.6
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCC-CCCCCCCCEEEccCcccCCcCcc--cccCCCCCCE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPD-LSSLINLKSLSLSRNFFSGAFPL--SILSLHRLTI 150 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~ 150 (665)
.+++.|+|++|++++ +++..|.++++|++|+|++|+|++.++. |.++++|++|+|++|+++ .+|. .|.++++|++
T Consensus 76 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 76 VNLQALVLTSNGINT-IEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCEEECCCCccCc-cCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 345555555555552 3322455555555555555555544442 444555555555555554 2332 3444444444
Q ss_pred EEeecc-cccccCCccccCCCccCeeeccccccccc
Q 005999 151 LDLSYN-NLTGLIPVNLTALDRLYSLKLEWNRFSGT 185 (665)
Q Consensus 151 L~L~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 185 (665)
|+|++| .+.+..|..+.++++|+.|++++|++++.
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 189 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSY 189 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCcc
Confidence 444444 23333333444444444444444444433
No 329
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.65 E-value=1.2e-16 Score=178.60 Aligned_cols=157 Identities=23% Similarity=0.229 Sum_probs=108.6
Q ss_pred CCEEEEEecCCCCcccCCc--cccCCCCCCcEEEccCCcCccCCC---CCCCCCCCCEEEccCcccCCcCcccccCCCCC
Q 005999 74 GRVVRFVLQSFGLRGTFPP--NTLTRLDQLRVLSLHNNSLTGPIP---DLSSLINLKSLSLSRNFFSGAFPLSILSLHRL 148 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~--~~~~~l~~L~~L~L~~N~l~~~~p---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 148 (665)
..++.|+|++|++++.+|+ ..++.+++|+.|+|++|+|++.++ .+..+++|++|+|++|+|+ .+|..+..+++|
T Consensus 334 ~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L 412 (549)
T 2z81_A 334 KSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKM 412 (549)
T ss_dssp TTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTC
T ss_pred ccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccc
Confidence 4566677777777665542 135666666667776666665542 3566677777777777776 566666666666
Q ss_pred CEEEeecccccccCCccc------------------cCCCccCeeecccccccccCCCCCCCCcceEecccccccccCCC
Q 005999 149 TILDLSYNNLTGLIPVNL------------------TALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPE 210 (665)
Q Consensus 149 ~~L~L~~N~l~~~~p~~~------------------~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~ 210 (665)
++|+|++|+|+ .+|..+ ..+++|+.|+|++|+|+.++....+++|++|++++|+|++.+|.
T Consensus 413 ~~L~Ls~N~l~-~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~~ip~~~~l~~L~~L~Ls~N~l~~~~~~ 491 (549)
T 2z81_A 413 RFLNLSSTGIR-VVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPDASLFPVLLVMKISRNQLKSVPDG 491 (549)
T ss_dssp CEEECTTSCCS-CCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCGGGCTTCCEEECCSSCCCCCCTT
T ss_pred cEEECCCCCcc-cccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccCcCCCcccCccCCEEecCCCccCCcCHH
Confidence 66666666665 223221 36778888888888888554433778899999999999987775
Q ss_pred -CCcccCcCcccccCCCCCCCCC
Q 005999 211 -TPTLLKFDASSFSMNPNLCGKV 232 (665)
Q Consensus 211 -~~~l~~l~~~~~~~n~~lc~~~ 232 (665)
...+.+|..+++++|++.|+|+
T Consensus 492 ~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 492 IFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp GGGGCTTCCEEECCSSCBCCCHH
T ss_pred HHhcCcccCEEEecCCCccCCCc
Confidence 3567888899999999999876
No 330
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.64 E-value=3.4e-16 Score=183.83 Aligned_cols=162 Identities=20% Similarity=0.206 Sum_probs=135.0
Q ss_pred ccccceeecCCCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCC-C-CCCCCCCCCEEEccCcccCCcCccc
Q 005999 64 CQWQGVKCAQGRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPI-P-DLSSLINLKSLSLSRNFFSGAFPLS 141 (665)
Q Consensus 64 C~w~gv~C~~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~-p-~~~~l~~L~~L~Ls~N~l~~~~p~~ 141 (665)
|+|..|.+...+++.|+|++|.+++ +++..|.++++|++|+|++|.+.+.+ | .|.++++|++|+|++|+|++..|..
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~-i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRT-VTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCE-ECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCc-cChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 5688888755889999999999995 44458999999999999999766554 5 7999999999999999999888999
Q ss_pred ccCCCCCCEEEeecccccccCCcc--ccCCCccCeeecccccccccCCC--C-CCCCcceEecccccccccCCCC-Ccc-
Q 005999 142 ILSLHRLTILDLSYNNLTGLIPVN--LTALDRLYSLKLEWNRFSGTVPP--L-NQPFLVVFNVSGNNLTGQVPET-PTL- 214 (665)
Q Consensus 142 ~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~~~--~-~~~~L~~l~l~~N~l~~~~p~~-~~l- 214 (665)
|.++++|++|+|++|.+++.+|.. +.++++|+.|+|++|++++..+. + .+++|++|++++|.+++..|.. ..+
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~ 172 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQ 172 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHH
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccccc
Confidence 999999999999999999877765 89999999999999999988664 3 7899999999999998776632 222
Q ss_pred -cCcCcccccCCC
Q 005999 215 -LKFDASSFSMNP 226 (665)
Q Consensus 215 -~~l~~~~~~~n~ 226 (665)
.+|..+.+++|.
T Consensus 173 ~~~L~~L~L~~n~ 185 (844)
T 3j0a_A 173 GKTLSFFSLAANS 185 (844)
T ss_dssp HCSSCCCEECCSB
T ss_pred CCccceEECCCCc
Confidence 566667776664
No 331
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.64 E-value=4.1e-16 Score=171.14 Aligned_cols=154 Identities=21% Similarity=0.194 Sum_probs=136.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
.+++.|+|++|.+++ +++..|.++++|++|+|++|+|+++++ .|.++++|++|+|++|++++..|..|.++++|+.|+
T Consensus 56 ~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 56 PHLEELELNENIVSA-VEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCE-eChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 689999999999995 544589999999999999999998888 589999999999999999988899999999999999
Q ss_pred eecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCC-CCcccCcCcccccCCCCC
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPE-TPTLLKFDASSFSMNPNL 228 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~~l 228 (665)
|++|.+++..|..|.++++|+.|+|++|++++.++.. .+++|+.|++++|++++..+. ...+.+|..+++++|+.+
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~ 213 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL 213 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTC
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccc
Confidence 9999999988999999999999999999999877653 788999999999999987663 356778888888887654
No 332
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.64 E-value=2.8e-16 Score=180.26 Aligned_cols=152 Identities=23% Similarity=0.187 Sum_probs=128.6
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
.+++.|+|++|+++ .+++..|.++++|++|+|++|.+++.+| .|+++++|++|+|++|++++..+..|+++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLR-RLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCC-CCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCC-CcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 47999999999999 4666689999999999999999999888 688999999999999999954445799999999999
Q ss_pred eecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCC---CcccCcCcccccCCC
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPET---PTLLKFDASSFSMNP 226 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~---~~l~~l~~~~~~~n~ 226 (665)
|++|++++..|..|.++++|++|+|++|++++.+|.. .+++|++|++++|++++..+.. ..+.+|..+++++|.
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~ 182 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQ 182 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCc
Confidence 9999999777788999999999999999999887764 7889999999999998776532 133567788888774
No 333
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.63 E-value=3.9e-16 Score=157.07 Aligned_cols=146 Identities=22% Similarity=0.228 Sum_probs=125.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
.+++.|+|++|+++ .++ .+..+++|+.|+|++|+|++.++ +.++++|+.|+|++|++++ +|.... ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA--GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEEC
T ss_pred CcCcEEECcCCCcc-cch--HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEEc
Confidence 67899999999998 676 58999999999999999999887 9999999999999999994 664333 89999999
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCCCCCCcceEecccccccccCCCCCcccCcCcccccCCCCCC
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNPNLC 229 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~lc 229 (665)
++|+|++ +| .+..+++|+.|+|++|++++..+-..+++|+.|++++|++++. +....+.+|..+++++|+..|
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEEC
T ss_pred cCCccCC-Ch-hhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccC
Confidence 9999996 44 6899999999999999999875333889999999999999976 656778889999999987543
No 334
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=2.2e-16 Score=183.45 Aligned_cols=150 Identities=20% Similarity=0.247 Sum_probs=135.4
Q ss_pred CCEEEEEecCCCCcc-----------------cCCccccC--CCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcc
Q 005999 74 GRVVRFVLQSFGLRG-----------------TFPPNTLT--RLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNF 133 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g-----------------~l~~~~~~--~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~ 133 (665)
.+++.|+|++|.|+| .+|+ .++ ++++|+.|+|++|++.+.+| .|++|++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~-~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE-ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCCh-hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 689999999999998 4887 777 99999999999999999999 79999999999999998
Q ss_pred -cCC-cCcccccCCC-------CCCEEEeecccccccCCc--cccCCCccCeeecccccccccCCCC-CCCCcceEeccc
Q 005999 134 -FSG-AFPLSILSLH-------RLTILDLSYNNLTGLIPV--NLTALDRLYSLKLEWNRFSGTVPPL-NQPFLVVFNVSG 201 (665)
Q Consensus 134 -l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~ 201 (665)
|+| .+|..|++++ +|+.|+|++|+|+ .+|. .+.++++|+.|+|++|+++ .+|.+ .+++|+.|+|++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDY 604 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCS
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcC
Confidence 998 8998877666 9999999999999 8998 8999999999999999999 55555 889999999999
Q ss_pred ccccccCC-CCCcccC-cCcccccCCCC
Q 005999 202 NNLTGQVP-ETPTLLK-FDASSFSMNPN 227 (665)
Q Consensus 202 N~l~~~~p-~~~~l~~-l~~~~~~~n~~ 227 (665)
|+|+ .+| ....+.+ |..+++++|..
T Consensus 605 N~l~-~lp~~l~~l~~~L~~L~Ls~N~L 631 (876)
T 4ecn_A 605 NQIE-EIPEDFCAFTDQVEGLGFSHNKL 631 (876)
T ss_dssp SCCS-CCCTTSCEECTTCCEEECCSSCC
T ss_pred Cccc-cchHHHhhccccCCEEECcCCCC
Confidence 9999 555 4567788 99999999864
No 335
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.63 E-value=1.5e-16 Score=164.92 Aligned_cols=151 Identities=24% Similarity=0.175 Sum_probs=99.3
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCC-----------------CCCCCCCCEEEccCcccC
Q 005999 73 QGRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPD-----------------LSSLINLKSLSLSRNFFS 135 (665)
Q Consensus 73 ~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~-----------------~~~l~~L~~L~Ls~N~l~ 135 (665)
..+++.|+|++|.+++.. + +..+++|++|+|++|+|++.++. ...+++|+.|+|++|+++
T Consensus 57 l~~L~~L~Ls~n~l~~~~-~--~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~ 133 (317)
T 3o53_A 57 FTKLELLNLSSNVLYETL-D--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKIT 133 (317)
T ss_dssp CTTCCEEECTTSCCEEEE-E--ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCC
T ss_pred CCcCCEEECCCCcCCcch-h--hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCccccCCCCEEECCCCCCC
Confidence 367888888888888533 2 78888888888888887765421 122455666666666666
Q ss_pred CcCcccccCCCCCCEEEeecccccccCCcccc-CCCccCeeecccccccccCCCCCCCCcceEecccccccccCCCCCcc
Q 005999 136 GAFPLSILSLHRLTILDLSYNNLTGLIPVNLT-ALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPETPTL 214 (665)
Q Consensus 136 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~~~l 214 (665)
+..|..+..+++|+.|+|++|++++..|..+. .+++|+.|+|++|++++.++...+++|+.|++++|+|++.++....+
T Consensus 134 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l 213 (317)
T 3o53_A 134 MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGPEFQSA 213 (317)
T ss_dssp SGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEECGGGGGG
T ss_pred CccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCcchhhhccc
Confidence 55555666666777777777777665555553 56677777777777766644445666777777777777655555556
Q ss_pred cCcCcccccCCC
Q 005999 215 LKFDASSFSMNP 226 (665)
Q Consensus 215 ~~l~~~~~~~n~ 226 (665)
.+|..+++++|.
T Consensus 214 ~~L~~L~L~~N~ 225 (317)
T 3o53_A 214 AGVTWISLRNNK 225 (317)
T ss_dssp TTCSEEECTTSC
T ss_pred CcccEEECcCCc
Confidence 666666666664
No 336
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.63 E-value=2.3e-16 Score=163.42 Aligned_cols=153 Identities=16% Similarity=0.127 Sum_probs=128.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCccccc-CCCCCCEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSIL-SLHRLTIL 151 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L 151 (665)
..++.|+|++|++++ +++ ..+++|+.|+|++|++++.++ .++.+++|++|+|++|.+++..|..+. .+++|++|
T Consensus 99 ~~L~~L~l~~n~l~~-~~~---~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 174 (317)
T 3o53_A 99 PSIETLHAANNNISR-VSC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (317)
T ss_dssp TTCCEEECCSSCCSE-EEE---CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECCCCccCC-cCc---cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEE
Confidence 456667777777764 332 246889999999999999888 899999999999999999987787774 79999999
Q ss_pred EeecccccccCCccccCCCccCeeecccccccccCCCC-CCCCcceEecccccccccCCCCCcccCcCcccccCCCCCCC
Q 005999 152 DLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL-NQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNPNLCG 230 (665)
Q Consensus 152 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~lc~ 230 (665)
+|++|+|++. | ....+++|+.|+|++|++++.++.+ .+++|+.|++++|+|++.++....+.+|..+++++|+..|+
T Consensus 175 ~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 175 NLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp ECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHH
T ss_pred ECCCCcCccc-c-cccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCc
Confidence 9999999955 4 3445999999999999999988877 78999999999999997655556788999999999999886
Q ss_pred CC
Q 005999 231 KV 232 (665)
Q Consensus 231 ~~ 232 (665)
+.
T Consensus 253 ~~ 254 (317)
T 3o53_A 253 TL 254 (317)
T ss_dssp HH
T ss_pred CH
Confidence 43
No 337
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.62 E-value=1.5e-15 Score=171.39 Aligned_cols=152 Identities=22% Similarity=0.188 Sum_probs=113.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
..++.|+|++|.+++ +++..|+.+++|+.|+|++|.|++.+| .|+++++|++|+|++|.|++..+..|+++++|++|+
T Consensus 75 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCC-CChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 468888888888884 444478888888888888888888877 578888888888888888844444567888888888
Q ss_pred eecccccccCCccccCCCccCeeecccccccccCCC--------------------------------------------
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPP-------------------------------------------- 188 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-------------------------------------------- 188 (665)
|++|.|++..|..|..+++|+.|+|++|++++....
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~ 233 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVE 233 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSC
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCC
Confidence 888888877777788888888888888877654211
Q ss_pred ----------------C-CCCCcceEecccccccccCCC-CCcccCcCcccccCCC
Q 005999 189 ----------------L-NQPFLVVFNVSGNNLTGQVPE-TPTLLKFDASSFSMNP 226 (665)
Q Consensus 189 ----------------~-~~~~L~~l~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~ 226 (665)
+ .+++|+.|+|++|.|++.+|. ...+.+|..+++++|.
T Consensus 234 L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 289 (597)
T 3oja_B 234 LTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNR 289 (597)
T ss_dssp CCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSC
T ss_pred CCEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCC
Confidence 1 345677788888888877663 2456777778887774
No 338
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.62 E-value=1.2e-15 Score=162.93 Aligned_cols=152 Identities=20% Similarity=0.193 Sum_probs=97.4
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCC-CCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPD-LSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
.+++.|+|++|++++ +++..|+++++|++|+|++|+++.+++. |.++++|++|+|++|++++..|..|.++++|+.|+
T Consensus 93 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (390)
T 3o6n_A 93 HTIQKLYMGFNAIRY-LPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ 171 (390)
T ss_dssp TTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEE
T ss_pred CCcCEEECCCCCCCc-CCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEE
Confidence 456666666666663 4444566666666666666666655553 45666666666666666655555566666666666
Q ss_pred eecccccccCC-----------------------------------------------------------ccccCCCccC
Q 005999 153 LSYNNLTGLIP-----------------------------------------------------------VNLTALDRLY 173 (665)
Q Consensus 153 L~~N~l~~~~p-----------------------------------------------------------~~~~~l~~L~ 173 (665)
|++|++++... ..+..+++|+
T Consensus 172 l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~ 251 (390)
T 3o6n_A 172 LSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLV 251 (390)
T ss_dssp CCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCCGGGGGCTTCS
T ss_pred CCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCcccHHHcCCCCcc
Confidence 66665553211 2245567788
Q ss_pred eeecccccccccCCCC--CCCCcceEecccccccccCCCCCcccCcCcccccCCC
Q 005999 174 SLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNP 226 (665)
Q Consensus 174 ~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 226 (665)
.|+|++|++++.+|.. .+++|+.|++++|++++..+....+++|..+++++|.
T Consensus 252 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~ 306 (390)
T 3o6n_A 252 EVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNH 306 (390)
T ss_dssp EEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSC
T ss_pred EEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCc
Confidence 8888888888776654 6778888888888888765544567777778887774
No 339
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.62 E-value=7.2e-16 Score=157.60 Aligned_cols=146 Identities=28% Similarity=0.316 Sum_probs=117.7
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 73 QGRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 73 ~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
..+++.|+|++|++++ +++ +..+++|+.|+|++|++++. |.+..+++|++|+|++|++++ + +.+..+++|+.|+
T Consensus 67 l~~L~~L~L~~n~l~~-~~~--l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTD-IKP--LANLKNLGWLFLDENKVKDL-SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 140 (291)
T ss_dssp CTTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCCG-GGGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEE
T ss_pred CCCCCEEEccCCccCC-Ccc--cccCCCCCEEECCCCcCCCC-hhhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEE
Confidence 3678888999988884 554 88888999999999988874 458888889999999998884 4 4688888899999
Q ss_pred eecccccccCCccccCCCccCeeecccccccccCCCCCCCCcceEecccccccccCCCCCcccCcCcccccCCCC
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNPN 227 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~ 227 (665)
|++|++++. ..+..+++|+.|+|++|++++.++-..+++|+.|++++|+|++. |....+.+|..+++++|+.
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~l-~~l~~l~~L~~L~l~~n~i 212 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQEC 212 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEEEEEEEE
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCCC-hhhccCCCCCEEECcCCcc
Confidence 999988854 57888888999999999988877744788889999999988863 4456677888888888764
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.62 E-value=1.3e-15 Score=157.08 Aligned_cols=146 Identities=21% Similarity=0.330 Sum_probs=111.3
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 73 QGRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 73 ~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
..+++.|+|++|+++ .+++ +..+++|+.|+|++|++++. +.+..+++|+.|+|++|++++ +|. +..+++|+.|+
T Consensus 62 l~~L~~L~L~~n~i~-~~~~--~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 62 LNNLIGLELKDNQIT-DLAP--LKNLTKITELELSGNPLKNV-SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLY 135 (308)
T ss_dssp CTTCCEEECCSSCCC-CCGG--GTTCCSCCEEECCSCCCSCC-GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCC-CChh--HccCCCCCEEEccCCcCCCc-hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEE
Confidence 367888888888888 4554 88888888888888888765 467788888888888888884 553 78888888888
Q ss_pred eecccccccCCccccCCCccCeeecccccccccCCCCCCCCcceEecccccccccCCCCCcccCcCcccccCCCC
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNPN 227 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~ 227 (665)
|++|++++..+ +..+++|+.|+|++|++++.++-..+++|+.|++++|++++..+ ...+.+|..+++++|..
T Consensus 136 l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l 207 (308)
T 1h6u_A 136 LDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQI 207 (308)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCC
T ss_pred CCCCccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCcc
Confidence 88888885433 77888888888888888876663377788888888888876544 45667777788877743
No 341
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.61 E-value=1.3e-15 Score=146.30 Aligned_cols=129 Identities=20% Similarity=0.274 Sum_probs=111.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
..++.|+|++|.+. .+ + .+..+++|++|+|++|++++..+ .|+.+++|++|+|++|++++..|..|.++++|+.|+
T Consensus 66 ~~L~~L~l~~n~~~-~~-~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHAT-NY-N-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCS-CC-G-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCC-cc-h-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 58999999999776 33 3 69999999999999999998555 899999999999999999988999999999999999
Q ss_pred eecccccccCCccccCCCccCeeecccccccccCCCCCCCCcceEecccccccc
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTG 206 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~ 206 (665)
|++|++.+.+| .+..+++|+.|++++|++++..+-..+++|+.|++++|++.+
T Consensus 143 L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 143 LSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred ccCCCCccccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 99999333666 699999999999999999986643488999999999999874
No 342
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.61 E-value=1.1e-15 Score=171.38 Aligned_cols=152 Identities=21% Similarity=0.182 Sum_probs=128.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
.+++.|+|++|++++ +++..|.++++|+.|+|++|++++++| .|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCE-ECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCc-cChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 479999999999994 555589999999999999999999888 799999999999999999987788999999999999
Q ss_pred eecccccccCCccccCCCccCeeeccccccccc-CCCC--CCCCcceEecccccccccCCCC-CcccCc----CcccccC
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGT-VPPL--NQPFLVVFNVSGNNLTGQVPET-PTLLKF----DASSFSM 224 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~--~~~~L~~l~l~~N~l~~~~p~~-~~l~~l----~~~~~~~ 224 (665)
|++|++++..+..++++++|++|++++|++++. +|.. .+++|+.|++++|++++..|.. ..+.++ ..+++++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 999999976666799999999999999999874 4543 7899999999999999876632 344455 4566666
Q ss_pred CC
Q 005999 225 NP 226 (665)
Q Consensus 225 n~ 226 (665)
|.
T Consensus 187 n~ 188 (570)
T 2z63_A 187 NP 188 (570)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 343
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.61 E-value=3e-15 Score=155.95 Aligned_cols=150 Identities=18% Similarity=0.210 Sum_probs=120.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCcc--CCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTG--PIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTI 150 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~--~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 150 (665)
..++.|++++|.++ .+++..+.++++|+.|+|++|.++. ..+ .|.++++|+.|+|++|+++ .+|..+. ++|+.
T Consensus 121 ~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~ 196 (330)
T 1xku_A 121 KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTE 196 (330)
T ss_dssp TTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSE
T ss_pred ccccEEECCCCccc-ccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCE
Confidence 47889999999998 5666678999999999999999864 555 6888888999999888888 5776664 78888
Q ss_pred EEeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccCCCCCcccCcCcccccCCCC
Q 005999 151 LDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNPN 227 (665)
Q Consensus 151 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~ 227 (665)
|+|++|++++..|..+..+++|+.|+|++|++++.++.. .+++|+.|++++|+++..+.....+.+|..+++++|+.
T Consensus 197 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~i 275 (330)
T 1xku_A 197 LHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNI 275 (330)
T ss_dssp EECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSCC
T ss_pred EECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCCcC
Confidence 888888888877888888888888888888888877743 77888888888888884444456677788888888753
No 344
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.60 E-value=1.6e-15 Score=154.98 Aligned_cols=144 Identities=25% Similarity=0.309 Sum_probs=128.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
.+++.|++++|++. .++ .+..+++|+.|+|++|++++.++ +.++++|++|+|++|++++ +| .+..+++|+.|+|
T Consensus 46 ~~L~~L~l~~~~i~-~~~--~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcc-cCh--hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEEC
Confidence 57999999999999 565 48999999999999999999887 9999999999999999995 45 4999999999999
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCC-CCCCcceEecccccccccCCCCCcccCcCcccccCCCC
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL-NQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNPN 227 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~ 227 (665)
++|+|++. ..+..+++|+.|++++|++++. +.+ .+++|+.|++++|++++..| ...+.+|..+++++|..
T Consensus 120 ~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 120 EHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp TTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCC
T ss_pred CCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcC
Confidence 99999964 4689999999999999999987 444 88999999999999998766 67788899999998853
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.60 E-value=1.1e-15 Score=157.71 Aligned_cols=145 Identities=20% Similarity=0.311 Sum_probs=128.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
.+++.|+|++|.+++ ++ .+..+++|+.|+|++|++++.. .+..+++|+.|+|++|++++ ++. +..+++|+.|+|
T Consensus 85 ~~L~~L~L~~n~l~~-~~--~~~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 158 (308)
T 1h6u_A 85 TKITELELSGNPLKN-VS--AIAGLQSIKTLDLTSTQITDVT-PLAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSI 158 (308)
T ss_dssp CSCCEEECCSCCCSC-CG--GGTTCTTCCEEECTTSCCCCCG-GGTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEEC
T ss_pred CCCCEEEccCCcCCC-ch--hhcCCCCCCEEECCCCCCCCch-hhcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEc
Confidence 689999999999995 54 6999999999999999999865 49999999999999999995 454 899999999999
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCCCCCCcceEecccccccccCCCCCcccCcCcccccCCCC
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNPN 227 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~ 227 (665)
++|++++. +. +..+++|+.|++++|++++.++-..+++|+.|++++|++++..| ...+.+|..+++++|+.
T Consensus 159 ~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i 229 (308)
T 1h6u_A 159 GNAQVSDL-TP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTI 229 (308)
T ss_dssp CSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEE
T ss_pred cCCcCCCC-hh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCee
Confidence 99999964 44 99999999999999999988774488999999999999997664 56788899999999975
No 346
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.60 E-value=1.2e-15 Score=142.31 Aligned_cols=129 Identities=22% Similarity=0.181 Sum_probs=112.7
Q ss_pred CCCCCcEEEccCCcCc-cCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCe
Q 005999 97 RLDQLRVLSLHNNSLT-GPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYS 174 (665)
Q Consensus 97 ~l~~L~~L~L~~N~l~-~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 174 (665)
..++|+.|+|++|+++ +.+| .+..+++|+.|+|++|.|++. ..|..+++|+.|+|++|++++.+|..+..+++|+.
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 4578999999999998 5566 679999999999999999955 78999999999999999999888888888999999
Q ss_pred eecccccccccC--CCC-CCCCcceEecccccccccCC----CCCcccCcCcccccCCCC
Q 005999 175 LKLEWNRFSGTV--PPL-NQPFLVVFNVSGNNLTGQVP----ETPTLLKFDASSFSMNPN 227 (665)
Q Consensus 175 L~l~~N~l~~~~--~~~-~~~~L~~l~l~~N~l~~~~p----~~~~l~~l~~~~~~~n~~ 227 (665)
|+|++|++++.+ +.+ .+++|+.|++++|++++.++ ....+++|..+++++|..
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 999999999865 344 88999999999999997765 346678888888888753
No 347
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=4.7e-15 Score=139.64 Aligned_cols=130 Identities=19% Similarity=0.126 Sum_probs=114.3
Q ss_pred CcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccc
Q 005999 101 LRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWN 180 (665)
Q Consensus 101 L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 180 (665)
.+.+++++|+++.++..+ .++|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..+..+++|+.|+|++|
T Consensus 9 ~~~l~~~~~~l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TTEEECCSSCCSSCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEecCCCCccCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 578999999999877544 379999999999999766677899999999999999999777777899999999999999
Q ss_pred cccccCCCC--CCCCcceEecccccccccCCCC-CcccCcCcccccCCCCCCCCC
Q 005999 181 RFSGTVPPL--NQPFLVVFNVSGNNLTGQVPET-PTLLKFDASSFSMNPNLCGKV 232 (665)
Q Consensus 181 ~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~-~~l~~l~~~~~~~n~~lc~~~ 232 (665)
++++.++.. .+++|++|++++|+|++.++.. ..+.+|..+++++|++.|.++
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999988864 7899999999999999776654 568889999999999998764
No 348
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.59 E-value=7.9e-16 Score=158.87 Aligned_cols=153 Identities=20% Similarity=0.159 Sum_probs=121.5
Q ss_pred CCEEEEEecCCCCcccCCcccc--CCCCCCcEEEccCCcCccCCC-----CCCCCCCCCEEEccCcccCCcCcccccCCC
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTL--TRLDQLRVLSLHNNSLTGPIP-----DLSSLINLKSLSLSRNFFSGAFPLSILSLH 146 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~--~~l~~L~~L~L~~N~l~~~~p-----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 146 (665)
.+++.|+|++|++.+.+|. .+ ..+++|++|+|++|.+++..+ .+..+++|++|+|++|++++..|..|.+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~-~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPP-LPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp SCCCEEEEESCCCBSCCCC-CSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred CceeEEEeeCCEeccchhh-hhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 3599999999999988776 55 889999999999999998655 245789999999999999988888999999
Q ss_pred CCCEEEeeccccccc--CC--ccccCCCccCeeecccccccccCCC----C-CCCCcceEecccccccccCCC-CCcc--
Q 005999 147 RLTILDLSYNNLTGL--IP--VNLTALDRLYSLKLEWNRFSGTVPP----L-NQPFLVVFNVSGNNLTGQVPE-TPTL-- 214 (665)
Q Consensus 147 ~L~~L~L~~N~l~~~--~p--~~~~~l~~L~~L~l~~N~l~~~~~~----~-~~~~L~~l~l~~N~l~~~~p~-~~~l-- 214 (665)
+|++|||++|++.+. ++ ..+..+++|++|+|++|+++...+. . .+++|++|+|++|+|++..|. ...+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 999999999998753 22 2346888999999999998754432 1 568899999999999887553 2333
Q ss_pred -cCcCcccccCCCC
Q 005999 215 -LKFDASSFSMNPN 227 (665)
Q Consensus 215 -~~l~~~~~~~n~~ 227 (665)
.+|..+++++|.-
T Consensus 250 ~~~L~~L~Ls~N~l 263 (310)
T 4glp_A 250 SSALNSLNLSFAGL 263 (310)
T ss_dssp CTTCCCEECCSSCC
T ss_pred cCcCCEEECCCCCC
Confidence 5788888888753
No 349
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.59 E-value=3.4e-15 Score=155.61 Aligned_cols=149 Identities=22% Similarity=0.281 Sum_probs=91.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccC--CcCcccccCC-----
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFS--GAFPLSILSL----- 145 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l----- 145 (665)
.+++.|+|++|+++ .+|+. +. ++|++|+|++|++++.++ .|.++++|+.|+|++|.++ +..|..+..+
T Consensus 102 ~~L~~L~L~~n~l~-~l~~~-~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L 177 (332)
T 2ft3_A 102 RKLQKLYISKNHLV-EIPPN-LP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYL 177 (332)
T ss_dssp TTCCEEECCSSCCC-SCCSS-CC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCC
T ss_pred CCCCEEECCCCcCC-ccCcc-cc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEE
Confidence 56777777777777 56653 32 667777777777776665 4666777777777777664 2445555544
Q ss_pred ---------------CCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccccccccC
Q 005999 146 ---------------HRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQV 208 (665)
Q Consensus 146 ---------------~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~~ 208 (665)
++|+.|+|++|++++..|..+..+++|+.|+|++|++++.++.. .+++|+.|++++|+++..+
T Consensus 178 ~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp 257 (332)
T 2ft3_A 178 RISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVP 257 (332)
T ss_dssp BCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCC
T ss_pred ECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecC
Confidence 35555566666666555556666666666666666666655532 5566666666666666322
Q ss_pred CCCCcccCcCcccccCCC
Q 005999 209 PETPTLLKFDASSFSMNP 226 (665)
Q Consensus 209 p~~~~l~~l~~~~~~~n~ 226 (665)
+....+.+|..+++++|+
T Consensus 258 ~~l~~l~~L~~L~l~~N~ 275 (332)
T 2ft3_A 258 AGLPDLKLLQVVYLHTNN 275 (332)
T ss_dssp TTGGGCTTCCEEECCSSC
T ss_pred hhhhcCccCCEEECCCCC
Confidence 233455566666666654
No 350
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.58 E-value=2.9e-15 Score=168.00 Aligned_cols=146 Identities=29% Similarity=0.322 Sum_probs=128.1
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 73 QGRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 73 ~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
...++.|+|++|+|.+ +++ +..|++|+.|+|++|+|+++ |.+..|++|+.|+|++|+|++ + +.+..|++|+.|+
T Consensus 64 l~~L~~L~Ls~N~l~~-~~~--l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTD-IKP--LTNLKNLGWLFLDENKIKDL-SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 137 (605)
T ss_dssp CTTCCEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCCC-TTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCCCCEEEeeCCCCCC-Chh--hccCCCCCEEECcCCCCCCC-hhhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEE
Confidence 4689999999999995 554 89999999999999999874 579999999999999999995 4 4689999999999
Q ss_pred eecccccccCCccccCCCccCeeecccccccccCCCCCCCCcceEecccccccccCCCCCcccCcCcccccCCCC
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNPN 227 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~ 227 (665)
|++|+|++. ..+..|++|+.|+|++|+|++.+|-..+++|+.|+|++|+|++. |....+.+|..+++++|+.
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l 209 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQEC 209 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEE
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcC
Confidence 999999965 57899999999999999999988844889999999999999974 6667788899999988864
No 351
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.58 E-value=1.3e-15 Score=159.16 Aligned_cols=138 Identities=12% Similarity=0.114 Sum_probs=98.8
Q ss_pred HhHhCcccceEEEEEEECCeEEEEEEEecCCCch------------h--------hHHHHHHHHHHHHhCCCCCCeeeee
Q 005999 394 AELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTA------------D--------TSAEAFEQHMEAVGGLSHPNLVPIR 453 (665)
Q Consensus 394 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------~--------~~~~~~~~e~~~l~~l~h~niv~l~ 453 (665)
...||+|+||.||+|...+|+.||||+++..... . .......+|...|.++.+.++.-..
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~ 179 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPE 179 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Confidence 4579999999999999889999999987543110 0 0111234567777777555443222
Q ss_pred EEEEeCCeEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCCceEeCCCC---
Q 005999 454 AYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSSNVLLGADF--- 530 (665)
Q Consensus 454 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~Nill~~~~--- 530 (665)
-+... ..++||||+.|++|.++.. . .....++.||+.+|.|||+.+ ||||||||.|||+++++
T Consensus 180 p~~~~--~~~LVME~i~G~~L~~l~~---------~--~~~~~l~~qll~~l~~lH~~g-IVHrDLKp~NILl~~dgd~~ 245 (397)
T 4gyi_A 180 PIAQS--RHTIVMSLVDALPMRQVSS---------V--PDPASLYADLIALILRLAKHG-LIHGDFNEFNILIREEKDAE 245 (397)
T ss_dssp EEEEE--TTEEEEECCSCEEGGGCCC---------C--SCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEEEEECSS
T ss_pred eeecc--CceEEEEecCCccHhhhcc---------c--HHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeCCCCcc
Confidence 22222 2379999999988865432 1 123467899999999999999 99999999999998776
Q ss_pred -------ceEEeecccccccCC
Q 005999 531 -------EARLTDYCLSVLSDS 545 (665)
Q Consensus 531 -------~~kl~Dfgl~~~~~~ 545 (665)
.+.|+||+.+...++
T Consensus 246 d~~~~~~~~~iID~~Q~V~~~h 267 (397)
T 4gyi_A 246 DPSSITLTPIIIXFPQMVSMDH 267 (397)
T ss_dssp CTTSEEEEEEECCCTTCEETTS
T ss_pred cccccccceEEEEeCCcccCCC
Confidence 389999998866543
No 352
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.58 E-value=2.2e-15 Score=167.22 Aligned_cols=131 Identities=19% Similarity=0.209 Sum_probs=80.9
Q ss_pred CCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCC--cCcccccCCCCCCEEEeecccccccCCcc-ccCCCc
Q 005999 96 TRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSG--AFPLSILSLHRLTILDLSYNNLTGLIPVN-LTALDR 171 (665)
Q Consensus 96 ~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~ 171 (665)
..+++|++|+|++|++++.+| .++++++|+.|+|++|++++ .+|..+.++++|++|+|++|++++.+|.. +..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 456666666666666666555 56666666666666666664 45556666666666666666666545543 556666
Q ss_pred cCeeecccccccccCCCCCCCCcceEecccccccccCCCCCcccCcCcccccCCC
Q 005999 172 LYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNP 226 (665)
Q Consensus 172 L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 226 (665)
|+.|++++|++++..|....++|+.|++++|+|+..++....+.+|..+++++|.
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~ 455 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQ 455 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred CCEEECcCCCCCcchhhhhcccCCEEECCCCcccccchhhhcCCCCCEEECCCCc
Confidence 6666666666666555433356667777777666322223455666666666663
No 353
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.58 E-value=5e-15 Score=165.96 Aligned_cols=131 Identities=21% Similarity=0.248 Sum_probs=93.6
Q ss_pred CCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCC--cCcccccCCCCCCEEEeecccccccCCc-cccCCCc
Q 005999 96 TRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSG--AFPLSILSLHRLTILDLSYNNLTGLIPV-NLTALDR 171 (665)
Q Consensus 96 ~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~ 171 (665)
..+++|++|+|++|++++.+| .++++++|+.|+|++|++++ .+|..|.++++|+.|+|++|++++.+|. .+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 567777788888888777665 67777888888888887775 3345677777888888888888764554 3667777
Q ss_pred cCeeecccccccccCCCCCCCCcceEecccccccccCCCCCcccCcCcccccCCC
Q 005999 172 LYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNP 226 (665)
Q Consensus 172 L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 226 (665)
|+.|++++|++++.+|....++|+.|++++|+|+..++....+.+|..+++++|.
T Consensus 430 L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~ 484 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQ 484 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSC
T ss_pred CCEEECCCCCCCcchhhhhcCcCCEEECCCCcCcccChhhcCCCCCCEEECCCCC
Confidence 8888888888777665543367788888888877444444566777777777764
No 354
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.58 E-value=5.2e-15 Score=155.48 Aligned_cols=160 Identities=14% Similarity=0.090 Sum_probs=114.5
Q ss_pred ccccceeecC-----------CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC--CCCCCCCCCE-EEc
Q 005999 64 CQWQGVKCAQ-----------GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP--DLSSLINLKS-LSL 129 (665)
Q Consensus 64 C~w~gv~C~~-----------~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~-L~L 129 (665)
|+|..|.|+. ..++.|+|++|+|+ .||++.|.+|++|++|+|++|++.+.+| .|.++++|.. +++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 7899999974 36899999999999 7998889999999999999999977665 5889999876 677
Q ss_pred cCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeeccc-ccccccCCCC--CC-CCcceEeccccccc
Q 005999 130 SRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEW-NRFSGTVPPL--NQ-PFLVVFNVSGNNLT 205 (665)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~--~~-~~L~~l~l~~N~l~ 205 (665)
+.|+|+...|..|.++++|++|++++|+|++..+..+....++..|++.+ |++..+++.. .+ ..++.|++++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 78999977788999999999999999999866655555555555555543 3444444332 22 23555555555555
Q ss_pred ccCCCCCcccCcCcccccC
Q 005999 206 GQVPETPTLLKFDASSFSM 224 (665)
Q Consensus 206 ~~~p~~~~l~~l~~~~~~~ 224 (665)
...+......++..+.+.+
T Consensus 168 ~i~~~~f~~~~L~~l~l~~ 186 (350)
T 4ay9_X 168 EIHNSAFNGTQLDELNLSD 186 (350)
T ss_dssp EECTTSSTTEEEEEEECTT
T ss_pred CCChhhccccchhHHhhcc
Confidence 4333333333344444443
No 355
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.57 E-value=1.6e-15 Score=138.53 Aligned_cols=125 Identities=19% Similarity=0.156 Sum_probs=106.9
Q ss_pred CCCCCcEEEccCCcCc-cCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCe
Q 005999 97 RLDQLRVLSLHNNSLT-GPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYS 174 (665)
Q Consensus 97 ~l~~L~~L~L~~N~l~-~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 174 (665)
..++|+.|+|++|.++ +.+| .+..+++|+.|+|++|.+++. ..+.++++|++|+|++|++++.+|..+..+++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999999 5666 789999999999999999965 78999999999999999999888988888999999
Q ss_pred eecccccccccC--CCC-CCCCcceEecccccccccCC----CCCcccCcCccccc
Q 005999 175 LKLEWNRFSGTV--PPL-NQPFLVVFNVSGNNLTGQVP----ETPTLLKFDASSFS 223 (665)
Q Consensus 175 L~l~~N~l~~~~--~~~-~~~~L~~l~l~~N~l~~~~p----~~~~l~~l~~~~~~ 223 (665)
|++++|++++.+ ..+ .+++|++|++++|++++..+ ....+++|..++++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 999999999864 344 88999999999999997665 23456666666553
No 356
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.57 E-value=8.5e-15 Score=159.46 Aligned_cols=135 Identities=21% Similarity=0.260 Sum_probs=114.0
Q ss_pred CCEEEEEecCCCCcc------------------------cCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEc
Q 005999 74 GRVVRFVLQSFGLRG------------------------TFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSL 129 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g------------------------~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L 129 (665)
.+++.|+|++|.+.+ .+++..|.++++|+.|+|++|+|++. |.+..+++|+.|+|
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~L 225 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEM 225 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEEC
T ss_pred CCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEEC
Confidence 467777777776662 23333466777788888888888765 56888899999999
Q ss_pred cCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEeccccccccc
Q 005999 130 SRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLTGQ 207 (665)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~~~ 207 (665)
++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|++...
T Consensus 226 s~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 226 SGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp TTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred cCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCC
Confidence 999999888999999999999999999999999999999999999999999999888875 789999999999999865
Q ss_pred CC
Q 005999 208 VP 209 (665)
Q Consensus 208 ~p 209 (665)
..
T Consensus 306 C~ 307 (452)
T 3zyi_A 306 CD 307 (452)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 357
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=3.4e-15 Score=140.58 Aligned_cols=128 Identities=20% Similarity=0.149 Sum_probs=105.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCC-CCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLD-QLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
..++.|+|++|+++ .++. +..+. +|+.|+|++|.|++. +.|..+++|++|+|++|+|++..|..|..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~-~i~~--~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIEN--LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCC-SCCC--GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCc-hhHH--hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 57889999999998 5643 55554 999999999999987 7888999999999999999954445558899999999
Q ss_pred eecccccccCCc--cccCCCccCeeecccccccccCCC----C-CCCCcceEecccccccc
Q 005999 153 LSYNNLTGLIPV--NLTALDRLYSLKLEWNRFSGTVPP----L-NQPFLVVFNVSGNNLTG 206 (665)
Q Consensus 153 L~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~----~-~~~~L~~l~l~~N~l~~ 206 (665)
|++|+|+ .+|. .+..+++|+.|++++|.++..++. . .+++|+.||+++|.+..
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 9999996 6666 788899999999999999876653 3 77889999999887763
No 358
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.55 E-value=5.4e-16 Score=178.28 Aligned_cols=134 Identities=22% Similarity=0.252 Sum_probs=119.8
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 73 QGRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 73 ~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
...++.|+|++|.+. .||+ .+.++++|+.|+|++|.|+.+++.|++|++|+.|+|++|+|+ .+|..|++|++|++|+
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~-~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISA-NIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCG-GGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCCcEEECCCCCCC-CCCh-hhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 368999999999999 8987 577999999999999999955558999999999999999999 8999999999999999
Q ss_pred eecccccccCCccccCCCccCeeecccccccccCCCC--CC-CCcceEecccccccccCCC
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQ-PFLVVFNVSGNNLTGQVPE 210 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~-~~L~~l~l~~N~l~~~~p~ 210 (665)
|++|.|+ .+|..|+.|++|+.|+|++|+|++.+|.. .+ ..+..|+|++|.++|.+|.
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 9999998 88989999999999999999999988865 22 2234588999999999884
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.55 E-value=5.2e-15 Score=165.97 Aligned_cols=143 Identities=26% Similarity=0.323 Sum_probs=128.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
.+++.|+|++|++. .++ .+..|++|+.|+|++|+|++.+| +..|++|+.|+|++|+|++ +| .|..|++|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCC-CCT--TGGGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCC-CCh--HHccCCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 67899999999998 565 59999999999999999999887 9999999999999999994 55 7999999999999
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCC-CCCCcceEecccccccccCCCCCcccCcCcccccCCC
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL-NQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNP 226 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 226 (665)
++|+|++ + ..+..|++|+.|+|++|+|++. +.+ .+++|+.|+|++|+|++.+| ...+.+|..+++++|.
T Consensus 117 s~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 117 EHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp TTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred cCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCC
Confidence 9999995 4 4699999999999999999987 444 88999999999999998777 6778899999999985
No 360
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.54 E-value=2.5e-14 Score=134.27 Aligned_cols=107 Identities=24% Similarity=0.251 Sum_probs=87.0
Q ss_pred EEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeec
Q 005999 77 VRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSY 155 (665)
Q Consensus 77 ~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 155 (665)
+.+++++|+|+ .+|. .+. ++|+.|+|++|+|++++| .|.++++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~-~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPA-GIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCS-CCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCC-CcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 57889999997 7887 443 789999999999999888 788999999999999999965555578889999999999
Q ss_pred ccccccCCccccCCCccCeeecccccccccCC
Q 005999 156 NNLTGLIPVNLTALDRLYSLKLEWNRFSGTVP 187 (665)
Q Consensus 156 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 187 (665)
|+|++..+..|..+++|+.|+|++|.+....+
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 99986655568888888888888888775443
No 361
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.53 E-value=2.9e-14 Score=133.29 Aligned_cols=105 Identities=23% Similarity=0.200 Sum_probs=81.2
Q ss_pred EEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecc
Q 005999 78 RFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYN 156 (665)
Q Consensus 78 ~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 156 (665)
.|++++|+|+ .+|. .+ .++|+.|+|++|+|++++| .|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 13 ~l~~s~n~l~-~ip~-~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 13 TVDCSGKSLA-SVPT-GI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EEECTTSCCS-SCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCc-cC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 5677888888 5776 34 3788888888888888877 6888888888888888888666666778888888888888
Q ss_pred cccccCCccccCCCccCeeecccccccccC
Q 005999 157 NLTGLIPVNLTALDRLYSLKLEWNRFSGTV 186 (665)
Q Consensus 157 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 186 (665)
+|++..+..|..+++|+.|+|++|.++...
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 888666666777777777777777776543
No 362
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.53 E-value=3.2e-14 Score=133.01 Aligned_cols=109 Identities=22% Similarity=0.135 Sum_probs=98.2
Q ss_pred CcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccc
Q 005999 101 LRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWN 180 (665)
Q Consensus 101 L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 180 (665)
.+.|++++|+|+.++..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 11 ~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 5789999999998776663 89999999999999888999999999999999999999777777899999999999999
Q ss_pred cccccCCCC--CCCCcceEecccccccccCCCC
Q 005999 181 RFSGTVPPL--NQPFLVVFNVSGNNLTGQVPET 211 (665)
Q Consensus 181 ~l~~~~~~~--~~~~L~~l~l~~N~l~~~~p~~ 211 (665)
+|++.++.. .+++|+.|+|++|+|++..+..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l 121 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDI 121 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGGG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchhH
Confidence 999998864 8899999999999999876643
No 363
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.53 E-value=1.3e-14 Score=161.65 Aligned_cols=106 Identities=32% Similarity=0.401 Sum_probs=62.7
Q ss_pred CcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccc
Q 005999 101 LRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWN 180 (665)
Q Consensus 101 L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 180 (665)
|+.|+|++|+|++++ .|+++++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .++.+++|+.|+|++|
T Consensus 443 L~~L~Ls~n~l~~lp-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N 518 (567)
T 1dce_A 443 VRVLHLAHKDLTVLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 518 (567)
T ss_dssp CSEEECTTSCCSSCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred ceEEEecCCCCCCCc-CccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCC
Confidence 556666666666533 3666666666666666666 556666666666666666666664 44 5666666666666666
Q ss_pred cccccC-CCC--CCCCcceEecccccccccCCC
Q 005999 181 RFSGTV-PPL--NQPFLVVFNVSGNNLTGQVPE 210 (665)
Q Consensus 181 ~l~~~~-~~~--~~~~L~~l~l~~N~l~~~~p~ 210 (665)
+|++.+ |.. .+++|+.|+|++|+|++.+|.
T Consensus 519 ~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 519 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 666653 332 555666666666666655543
No 364
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.53 E-value=1.3e-14 Score=158.74 Aligned_cols=145 Identities=27% Similarity=0.311 Sum_probs=101.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
..++.|+|++|++++ ++ .+..+++|+.|+|++|.+++.++ +..+++|+.|+|++|.+++ +|. +..+++|+.|+|
T Consensus 221 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~L 294 (466)
T 1o6v_A 221 TNLDELSLNGNQLKD-IG--TLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISN-ISP-LAGLTALTNLEL 294 (466)
T ss_dssp TTCCEEECCSSCCCC-CG--GGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCC-CGG-GTTCTTCSEEEC
T ss_pred CCCCEEECCCCCccc-ch--hhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCc-ccc-ccCCCccCeEEc
Confidence 567778888887774 42 57777777777777777777665 6777777777777777774 333 677777777777
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCCCCCCcceEecccccccccCCCCCcccCcCcccccCCCC
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNPN 227 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~ 227 (665)
++|++++..| +..+++|+.|+|++|++++.+|...+++|+.|++++|++++. +....+.+|..+++++|+.
T Consensus 295 ~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l 365 (466)
T 1o6v_A 295 NENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQI 365 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCC
T ss_pred CCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCcc
Confidence 7777775443 667777777777777777766644667777777777777754 4445566666677766643
No 365
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=7e-15 Score=138.38 Aligned_cols=130 Identities=18% Similarity=0.115 Sum_probs=109.4
Q ss_pred ccCCCCCCcEEEccCCcCccCCCCCCCCC-CCCEEEccCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCcc
Q 005999 94 TLTRLDQLRVLSLHNNSLTGPIPDLSSLI-NLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRL 172 (665)
Q Consensus 94 ~~~~l~~L~~L~L~~N~l~~~~p~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 172 (665)
.+.++.+|+.|+|++|+++.+ |.+..+. +|++|+|++|.|++. ..|.++++|++|+|++|+|++..|..+..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 577899999999999999965 6676665 999999999999964 689999999999999999996655556899999
Q ss_pred CeeecccccccccCC--CC-CCCCcceEecccccccccCCC----CCcccCcCcccccCCC
Q 005999 173 YSLKLEWNRFSGTVP--PL-NQPFLVVFNVSGNNLTGQVPE----TPTLLKFDASSFSMNP 226 (665)
Q Consensus 173 ~~L~l~~N~l~~~~~--~~-~~~~L~~l~l~~N~l~~~~p~----~~~l~~l~~~~~~~n~ 226 (665)
+.|+|++|+++..++ .. .+++|+.|++++|+++...+. ...+++|..+++++|.
T Consensus 91 ~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~ 151 (176)
T 1a9n_A 91 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVK 151 (176)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECC
T ss_pred CEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCC
Confidence 999999999977665 34 789999999999999854332 4567788888887774
No 366
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.52 E-value=2.1e-14 Score=150.55 Aligned_cols=146 Identities=21% Similarity=0.259 Sum_probs=94.7
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
..++.|++++|.+. .+++ +..+++|+.|++++|.+++..+ +..+++|+.|+|++|+++ .+|. +..+++|+.|+|
T Consensus 177 ~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~-~~~~-~~~l~~L~~L~l 250 (347)
T 4fmz_A 177 TDLYSLSLNYNQIE-DISP--LASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKIT-DLSP-LANLSQLTWLEI 250 (347)
T ss_dssp TTCSEEECTTSCCC-CCGG--GGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCccc-cccc--ccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccC-CCcc-hhcCCCCCEEEC
Confidence 56778888888877 3443 6677777777777777766555 666677777777777776 3343 666777777777
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCCCCCCcceEecccccccccCCCC-CcccCcCcccccCCCC
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPET-PTLLKFDASSFSMNPN 227 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~-~~l~~l~~~~~~~n~~ 227 (665)
++|.+++ + ..+..+++|+.|++++|++++...-..+++|+.|++++|++++..|.. ..+.+|..+++++|+.
T Consensus 251 ~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 323 (347)
T 4fmz_A 251 GTNQISD-I-NAVKDLTKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHI 323 (347)
T ss_dssp CSSCCCC-C-GGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSC
T ss_pred CCCccCC-C-hhHhcCCCcCEEEccCCccCCChhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcc
Confidence 7777764 2 346667777777777777766522225666777777777766554432 3455666666666654
No 367
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.51 E-value=3.7e-14 Score=157.45 Aligned_cols=114 Identities=23% Similarity=0.228 Sum_probs=70.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
.+++.|+|++|+|+ .|| ..+++|+.|+|++|+|+++++ +.+ +|+.|+|++|+|++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip----~~l~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP----ELPASLEYLDACDNRLSTLPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSCCCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc----cccCCCCEEEccCCCCCCcch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 45777777777777 565 235677777777777776444 443 66666666666664 555 4566666666
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCCCCCCcceEeccccccc
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLT 205 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~ 205 (665)
++|+|++ +|. .+++|+.|+|++|+|+++++ +. ++|+.|+|++|+|+
T Consensus 148 s~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~-l~-~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE-LP-ESLEALDVSTNLLE 193 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC-CC-TTCCEEECCSSCCS
T ss_pred CCCccCc-CCC---cCCCcCEEECCCCCCCCcch-hh-CCCCEEECcCCCCC
Confidence 6666664 444 45566666666666666333 33 55666666666665
No 368
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=6e-14 Score=131.63 Aligned_cols=108 Identities=19% Similarity=0.143 Sum_probs=96.2
Q ss_pred CcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccc
Q 005999 101 LRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWN 180 (665)
Q Consensus 101 L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 180 (665)
-+.+++++|+|+.+++.+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 14 ~~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 14 QTLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SSEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CcEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 3789999999987776664 89999999999999888999999999999999999999766666789999999999999
Q ss_pred cccccCCC-C-CCCCcceEecccccccccCCC
Q 005999 181 RFSGTVPP-L-NQPFLVVFNVSGNNLTGQVPE 210 (665)
Q Consensus 181 ~l~~~~~~-~-~~~~L~~l~l~~N~l~~~~p~ 210 (665)
+|+++++. + .+++|++|+|++|+|....+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~ 123 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECRD 123 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBGG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccccc
Confidence 99998886 3 789999999999999976553
No 369
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.50 E-value=6.4e-17 Score=155.54 Aligned_cols=133 Identities=27% Similarity=0.314 Sum_probs=113.7
Q ss_pred CCEEEEEecCCCCcccCCc-----cccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCC
Q 005999 74 GRVVRFVLQSFGLRGTFPP-----NTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRL 148 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~-----~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 148 (665)
..++.++|+.+.+.|.+|+ ..+..+++|++|+|++|+|+++ |.+.++++|+.|+|++|+|+ .+|..+..+++|
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l-~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKI-SSLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCC-CCHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCccc-cccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 3555666666677766653 2688999999999999999985 48899999999999999999 789888888999
Q ss_pred CEEEeecccccccCCccccCCCccCeeecccccccccCC--CC-CCCCcceEecccccccccCCC
Q 005999 149 TILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVP--PL-NQPFLVVFNVSGNNLTGQVPE 210 (665)
Q Consensus 149 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~-~~~~L~~l~l~~N~l~~~~p~ 210 (665)
+.|+|++|+|++ +| .+..+++|+.|++++|++++.++ .. .+++|++|++++|++++.+|.
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 999999999996 56 68899999999999999997654 23 789999999999999988765
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.50 E-value=7.5e-14 Score=140.31 Aligned_cols=125 Identities=24% Similarity=0.290 Sum_probs=110.8
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 73 QGRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 73 ~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
...++.|+|++|+++ .+++ +..+++|+.|+|++|+|++.++ +.. ++|+.|+|++|+|++ +| .+.++++|+.|+
T Consensus 62 l~~L~~L~L~~N~i~-~~~~--l~~l~~L~~L~L~~N~l~~l~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 62 FTNLKELHLSHNQIS-DLSP--LKDLTKLEELSVNRNRLKNLNG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp CTTCCEEECCSSCCC-CCGG--GTTCSSCCEEECCSSCCSCCTT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCCEEECCCCccC-CChh--hccCCCCCEEECCCCccCCcCc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 478999999999999 4665 9999999999999999998655 333 999999999999995 55 699999999999
Q ss_pred eecccccccCCccccCCCccCeeecccccccccCCCC-CCCCcceEeccccccccc
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL-NQPFLVVFNVSGNNLTGQ 207 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~l~~~ 207 (665)
|++|+|++. | .+..+++|+.|+|++|++++. +.. .+++|+.|++++|++++.
T Consensus 135 Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 135 IRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 999999964 5 689999999999999999998 444 889999999999999965
No 371
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.49 E-value=1.3e-13 Score=149.90 Aligned_cols=118 Identities=19% Similarity=0.212 Sum_probs=55.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
.+++.|+|++|++++ +| .+..+++|++|+|++|+|++. | ++.+++|++|+|++|+|++ +| ++++++|++|+|
T Consensus 42 ~~L~~L~Ls~n~l~~-~~--~l~~l~~L~~L~Ls~n~l~~~-~-~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITD-MT--GIEKLTGLTKLICTSNNITTL-D-LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCC-CT--TGGGCTTCSEEECCSSCCSCC-C-CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCccc-Ch--hhcccCCCCEEEccCCcCCeE-c-cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEEC
Confidence 344555555555553 22 344555555555555555543 1 4445555555555555543 22 444555555555
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCCCCCCcceEeccccc
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNN 203 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~ 203 (665)
++|+|++ +| +..+++|+.|++++|++++. +-..+++|+.|++++|+
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~l~~l~~L~~L~l~~n~ 159 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-DVSHNTQLTELDCHLNK 159 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-CCTTCTTCCEEECTTCS
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCcccee-ccccCCcCCEEECCCCC
Confidence 5555543 22 44455555555555555442 22234444444444443
No 372
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.49 E-value=4.3e-14 Score=158.81 Aligned_cols=133 Identities=23% Similarity=0.256 Sum_probs=103.5
Q ss_pred CCCCCCCcccccee--------ecCCCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEE
Q 005999 57 LNERFDYCQWQGVK--------CAQGRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLS 128 (665)
Q Consensus 57 ~~~~~~~C~w~gv~--------C~~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ 128 (665)
|....+||.|+|.. |....++.|++++|+|+ .+|. .+. ++|+.|+|++|+|+.+++ .+++|++|+
T Consensus 15 W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~-~l~--~~L~~L~L~~N~l~~lp~---~l~~L~~L~ 87 (622)
T 3g06_A 15 WRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPD-CLP--AHITTLVIPDNNLTSLPA---LPPELRTLE 87 (622)
T ss_dssp HHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCS-CCC--TTCSEEEECSCCCSCCCC---CCTTCCEEE
T ss_pred HHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccCh-hhC--CCCcEEEecCCCCCCCCC---cCCCCCEEE
Confidence 54457899997643 44457999999999999 8887 454 799999999999997655 578999999
Q ss_pred ccCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCCCCCCcceEecccccccc
Q 005999 129 LSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTG 206 (665)
Q Consensus 129 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~ 206 (665)
|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|+.|++++|+|+++++. +++|++|++++|+|++
T Consensus 88 Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~lp~~--l~~L~~L~Ls~N~l~~ 155 (622)
T 3g06_A 88 VSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTSLPVL--PPGLQELSVSDNQLAS 155 (622)
T ss_dssp ECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSCCCCC--CTTCCEEECCSSCCSC
T ss_pred cCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCcCCCC--CCCCCEEECcCCcCCC
Confidence 9999998 6776 67889999999999884 454 567788888888888775542 4677777777777775
No 373
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.48 E-value=5.7e-14 Score=156.56 Aligned_cols=107 Identities=27% Similarity=0.219 Sum_probs=49.4
Q ss_pred EEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeec
Q 005999 76 VVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSY 155 (665)
Q Consensus 76 v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 155 (665)
++.|+|++|+|++ +|. |+.+++|+.|+|++|+|+.+++.|++|++|+.|+|++|+|++ +| .|++|++|+.|+|++
T Consensus 443 L~~L~Ls~n~l~~-lp~--~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CCC--GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-CcC--ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 4444444444442 332 444444444444444444322244444444444444444442 34 444444444444444
Q ss_pred ccccccC-CccccCCCccCeeecccccccccCC
Q 005999 156 NNLTGLI-PVNLTALDRLYSLKLEWNRFSGTVP 187 (665)
Q Consensus 156 N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~ 187 (665)
|+|++.. |..++.+++|+.|+|++|+|++.+|
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 4444443 4444444444444444444444444
No 374
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.48 E-value=5.5e-14 Score=153.67 Aligned_cols=146 Identities=29% Similarity=0.355 Sum_probs=124.5
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 73 QGRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 73 ~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
..+++.|++++|.+.+. ++ ++.+++|+.|+|++|++++. +.+..+++|+.|+|++|.+++..| +..+++|+.|+
T Consensus 198 l~~L~~L~l~~n~l~~~-~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 271 (466)
T 1o6v_A 198 LTNLESLIATNNQISDI-TP--LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELK 271 (466)
T ss_dssp CTTCSEEECCSSCCCCC-GG--GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred CCCCCEEEecCCccccc-cc--ccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEE
Confidence 36899999999999954 33 77899999999999999875 568889999999999999996544 88999999999
Q ss_pred eecccccccCCccccCCCccCeeecccccccccCCCCCCCCcceEecccccccccCCCCCcccCcCcccccCCCC
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNPN 227 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~ 227 (665)
|++|++++..| +..+++|+.|++++|++++.++-..+++|+.|++++|++++..| ...+.+|..+++++|..
T Consensus 272 l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l 343 (466)
T 1o6v_A 272 LGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKV 343 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCC
T ss_pred CCCCccCcccc--ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCcc
Confidence 99999996544 88999999999999999988775588999999999999998766 56788889999988854
No 375
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.48 E-value=9.3e-14 Score=151.14 Aligned_cols=142 Identities=19% Similarity=0.100 Sum_probs=113.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
..++.|++++|+..+.+ .+..+++|+.|+|++|+|++.+ ++.+++|+.|+|++|++++. .++.+++|+.|+|
T Consensus 148 ~~L~~L~l~~n~~~~~~---~~~~l~~L~~L~ls~n~l~~l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~L 219 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKL---DVTPQTQLTTLDCSFNKITELD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDC 219 (457)
T ss_dssp TTCCEEECTTCSCCCCC---CCTTCTTCCEEECCSSCCCCCC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEEC
T ss_pred CcCCEEECCCCCccccc---ccccCCcCCEEECCCCccceec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEEC
Confidence 57899999999777676 3788999999999999999854 88889999999999999854 3888999999999
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCC--CCC-------CcceEecccccccccCCCCCcccCcCcccccC
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQP-------FLVVFNVSGNNLTGQVPETPTLLKFDASSFSM 224 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~-------~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~ 224 (665)
++|+|++ +| +..+++|+.|++++|++++.++.. .+. +|+.|++++|++.|.+|. ..+.+|..+++++
T Consensus 220 s~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~-~~l~~L~~L~Ls~ 295 (457)
T 3bz5_A 220 SSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQA-EGCRKIKELDVTH 295 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEEC-TTCTTCCCCCCTT
T ss_pred cCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcccc-cccccCCEEECCC
Confidence 9999996 66 888999999999999999876432 222 456677777777777763 4567788888888
Q ss_pred CCC
Q 005999 225 NPN 227 (665)
Q Consensus 225 n~~ 227 (665)
|+.
T Consensus 296 n~~ 298 (457)
T 3bz5_A 296 NTQ 298 (457)
T ss_dssp CTT
T ss_pred Ccc
Confidence 864
No 376
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.46 E-value=1.3e-13 Score=144.52 Aligned_cols=107 Identities=25% Similarity=0.280 Sum_probs=87.7
Q ss_pred ccccceeecCCCEEEEEecCC-CCcccCCccccCCCCCCcEEEccC-CcCccCCC-CCCCCCCCCEEEccCcccCCcCcc
Q 005999 64 CQWQGVKCAQGRVVRFVLQSF-GLRGTFPPNTLTRLDQLRVLSLHN-NSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPL 140 (665)
Q Consensus 64 C~w~gv~C~~~~v~~l~l~~~-~l~g~l~~~~~~~l~~L~~L~L~~-N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~ 140 (665)
|.|..|.| +++ +|+ .||. |..+++|+.|+|++ |+|+++++ .|++|++|+.|+|++|+|++..|.
T Consensus 8 C~~~~v~~----------~~~n~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRC----------TRDGALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEEC----------CSSCCCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEc----------CCCCCCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 77777766 455 787 5876 89999999999996 99999887 789999999999999999988888
Q ss_pred cccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccc
Q 005999 141 SILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSG 184 (665)
Q Consensus 141 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 184 (665)
.|.+|++|+.|||++|+|++..|..+..++ |+.|+|++|.|..
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 899999999999999999865555555554 8888888887764
No 377
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.46 E-value=4.4e-13 Score=145.69 Aligned_cols=117 Identities=22% Similarity=0.233 Sum_probs=57.2
Q ss_pred CCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecc
Q 005999 99 DQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLE 178 (665)
Q Consensus 99 ~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 178 (665)
++|++|+|++|++++ +|+|+++++|++|++++|++++ +|..+ .+|++|+|++|++++ +| .+.++++|+.|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LPELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-CcccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 345555555555554 2345555555555555555552 44322 345555555555553 34 35555555555555
Q ss_pred cccccccCCCCCCCCcceEecccccccccCCCCCcccCcCcccccCC
Q 005999 179 WNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMN 225 (665)
Q Consensus 179 ~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n 225 (665)
+|++++.+.. .++|+.|++++|+++ .+|....+.+|..+++++|
T Consensus 204 ~N~l~~l~~~--~~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N 247 (454)
T 1jl5_A 204 NNSLKKLPDL--PLSLESIVAGNNILE-ELPELQNLPFLTTIYADNN 247 (454)
T ss_dssp SSCCSSCCCC--CTTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSS
T ss_pred CCcCCcCCCC--cCcccEEECcCCcCC-cccccCCCCCCCEEECCCC
Confidence 5555543221 134555555555555 3444444555555555554
No 378
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.44 E-value=2.7e-13 Score=141.94 Aligned_cols=143 Identities=24% Similarity=0.376 Sum_probs=66.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
.+++.|+++++++. .++ .+..+++|++|+|++|++++.++ +..+++|++|+|++|.++ .+| .|.++++|++|+|
T Consensus 44 ~~L~~L~l~~~~i~-~~~--~~~~~~~L~~L~l~~n~i~~~~~-~~~l~~L~~L~L~~n~i~-~~~-~~~~l~~L~~L~l 117 (347)
T 4fmz_A 44 ESITKLVVAGEKVA-SIQ--GIEYLTNLEYLNLNGNQITDISP-LSNLVKLTNLYIGTNKIT-DIS-ALQNLTNLRELYL 117 (347)
T ss_dssp TTCSEEECCSSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEEC
T ss_pred ccccEEEEeCCccc-cch--hhhhcCCccEEEccCCccccchh-hhcCCcCCEEEccCCccc-Cch-HHcCCCcCCEEEC
Confidence 34455555555554 333 24445555555555555554433 445555555555555554 232 3455555555555
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCC-CCCCcceEecccccccccCCCCCcccCcCcccccCC
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL-NQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMN 225 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n 225 (665)
++|++++. |. +..+++|+.|++++|.....++.. .+++|++|++++|.+.+..+ ...+.+|..+++++|
T Consensus 118 ~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~-~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 118 NEDNISDI-SP-LANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTP-IANLTDLYSLSLNYN 187 (347)
T ss_dssp TTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCGGGTTCTTCCEEECCSSCCCCCGG-GGGCTTCSEEECTTS
T ss_pred cCCcccCc-hh-hccCCceeEEECCCCCCcccccchhhCCCCcEEEecCCCcCCchh-hccCCCCCEEEccCC
Confidence 55555422 22 445555555555555333333333 44455555555555443322 233444444444444
No 379
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.43 E-value=3.9e-15 Score=155.33 Aligned_cols=114 Identities=16% Similarity=0.153 Sum_probs=54.3
Q ss_pred CccccceeecCCCEEEEEecCCCCcccCCccccCCC--CCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCc-Cc
Q 005999 63 YCQWQGVKCAQGRVVRFVLQSFGLRGTFPPNTLTRL--DQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGA-FP 139 (665)
Q Consensus 63 ~C~w~gv~C~~~~v~~l~l~~~~l~g~l~~~~~~~l--~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~-~p 139 (665)
|.+|.++.|+...++.|+++++.+.. ..+..+ ++|+.|++++|.+.+.++.+..+++|++|+|++|.+++. +|
T Consensus 36 c~~W~~~~~~~~~~~~l~l~~~~~~~----~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~ 111 (336)
T 2ast_B 36 CKRWYRLASDESLWQTLDLTGKNLHP----DVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLH 111 (336)
T ss_dssp CHHHHHHHTCSTTSSEEECTTCBCCH----HHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHH
T ss_pred HHHHHHHhcCchhheeeccccccCCH----HHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHH
Confidence 34577766654445555555554441 133333 444444444444444444444444444444444444433 44
Q ss_pred ccccCCCCCCEEEeecccccccCCccccCCCccCeeecccc
Q 005999 140 LSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWN 180 (665)
Q Consensus 140 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 180 (665)
..+.++++|++|+|++|.+++..|..++.+++|+.|+|++|
T Consensus 112 ~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~ 152 (336)
T 2ast_B 112 GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGC 152 (336)
T ss_dssp HHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTC
T ss_pred HHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCC
Confidence 44444444444444444444444444444444444444444
No 380
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.42 E-value=1.2e-12 Score=142.32 Aligned_cols=137 Identities=22% Similarity=0.210 Sum_probs=111.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
.+++.|+|++|++++ +| .++++++|++|+|++|++++++..+ .+|++|+|++|++++ +| .|+++++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp--~~~~l~~L~~L~l~~N~l~~lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP--ELQNSSFLKIIDVDNNSLKKLPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC--CCTTCTTCCEEECCSSCCSCCCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc--ccCCCCCCCEEECCCCcCcccCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 578999999999995 77 4999999999999999999854433 589999999999995 77 6999999999999
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCC-CCCCcceEecccccccccCCCCCcccCcCcccccCCC
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL-NQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMNP 226 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 226 (665)
++|++++ +|... ++|+.|++++|+++..+ .+ .+++|++|++++|++++ +|. .+.+|..+++++|.
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~~lp-~~~~l~~L~~L~l~~N~l~~-l~~--~~~~L~~L~l~~N~ 268 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILEELP-ELQNLPFLTTIYADNNLLKT-LPD--LPPSLEALNVRDNY 268 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSS-CCS--CCTTCCEEECCSSC
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCCccc-ccCCCCCCCEEECCCCcCCc-ccc--cccccCEEECCCCc
Confidence 9999985 55432 58889999999888544 45 78888999999998886 442 34667777777774
No 381
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.40 E-value=1.4e-12 Score=146.46 Aligned_cols=51 Identities=27% Similarity=0.194 Sum_probs=23.1
Q ss_pred CccCeeecccccccccCCCCCCCCcceEecccccccccCCCCCcccCcCcccccCC
Q 005999 170 DRLYSLKLEWNRFSGTVPPLNQPFLVVFNVSGNNLTGQVPETPTLLKFDASSFSMN 225 (665)
Q Consensus 170 ~~L~~L~l~~N~l~~~~~~~~~~~L~~l~l~~N~l~~~~p~~~~l~~l~~~~~~~n 225 (665)
++|+.|+|++|+|++++ ..+++|+.|++++|+|++ +|. .+.+|..+++++|
T Consensus 221 ~~L~~L~Ls~N~L~~lp--~~l~~L~~L~Ls~N~L~~-lp~--~~~~L~~L~Ls~N 271 (622)
T 3g06_A 221 SGLKELIVSGNRLTSLP--VLPSELKELMVSGNRLTS-LPM--LPSGLLSLSVYRN 271 (622)
T ss_dssp TTCCEEECCSSCCSCCC--CCCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSS
T ss_pred CCCCEEEccCCccCcCC--CCCCcCcEEECCCCCCCc-CCc--ccccCcEEeCCCC
Confidence 44555555555555433 233445555555555542 222 3334444444444
No 382
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.40 E-value=3.8e-13 Score=140.99 Aligned_cols=107 Identities=20% Similarity=0.144 Sum_probs=96.0
Q ss_pred cEEEccCC-cCccCCCCCCCCCCCCEEEccC-cccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeeccc
Q 005999 102 RVLSLHNN-SLTGPIPDLSSLINLKSLSLSR-NFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEW 179 (665)
Q Consensus 102 ~~L~L~~N-~l~~~~p~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 179 (665)
..++++++ +|+++++ |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|++
T Consensus 11 ~~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 11 SGLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp SCEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred CEEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 35789998 9999877 99999999999996 999988888999999999999999999999999999999999999999
Q ss_pred ccccccCCCC-CCCCcceEecccccccccCC
Q 005999 180 NRFSGTVPPL-NQPFLVVFNVSGNNLTGQVP 209 (665)
Q Consensus 180 N~l~~~~~~~-~~~~L~~l~l~~N~l~~~~p 209 (665)
|+|+++++.. ....|+.|+|++|+|.....
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHCSCA 120 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred CccceeCHHHcccCCceEEEeeCCCccCCCc
Confidence 9999988875 44449999999999986543
No 383
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.35 E-value=2.8e-14 Score=148.78 Aligned_cols=154 Identities=19% Similarity=0.183 Sum_probs=113.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccC-CC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGP-IP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTIL 151 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~-~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 151 (665)
..++.|++++|.+.+..+. +..+++|+.|+|++|.+++. ++ .+..+++|++|+|++|.+++..|..|+++++|++|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~--~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L 147 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE--HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRL 147 (336)
T ss_dssp TTCSEEECTTCEECSCCCS--CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEE
T ss_pred ccceEEEcCCccccccchh--hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEE
Confidence 5788888888888865443 66788888888888888764 44 57788888888888888888888888888888888
Q ss_pred Eeecc-cccc-cCCccccCCCccCeeecccc-ccccc-CCCC--CCC-CcceEecccc--ccc-ccCCCC-CcccCcCcc
Q 005999 152 DLSYN-NLTG-LIPVNLTALDRLYSLKLEWN-RFSGT-VPPL--NQP-FLVVFNVSGN--NLT-GQVPET-PTLLKFDAS 220 (665)
Q Consensus 152 ~L~~N-~l~~-~~p~~~~~l~~L~~L~l~~N-~l~~~-~~~~--~~~-~L~~l~l~~N--~l~-~~~p~~-~~l~~l~~~ 220 (665)
+|++| .+++ .+|..+..+++|+.|++++| .+++. ++.. .++ +|++|++++| .++ +.+|.. ..+++|..+
T Consensus 148 ~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L 227 (336)
T 2ast_B 148 NLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHL 227 (336)
T ss_dssp ECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEE
T ss_pred ECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEE
Confidence 88888 6775 36666778888888888888 88753 3332 667 8888888888 444 233322 356677777
Q ss_pred cccCCCCCC
Q 005999 221 SFSMNPNLC 229 (665)
Q Consensus 221 ~~~~n~~lc 229 (665)
++++|..+.
T Consensus 228 ~l~~~~~l~ 236 (336)
T 2ast_B 228 DLSDSVMLK 236 (336)
T ss_dssp ECTTCTTCC
T ss_pred eCCCCCcCC
Confidence 787776443
No 384
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.35 E-value=2e-12 Score=135.64 Aligned_cols=154 Identities=17% Similarity=0.106 Sum_probs=123.4
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCCcE-EEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCE
Q 005999 73 QGRVVRFVLQSFGLRGTFPPNTLTRLDQLRV-LSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTI 150 (665)
Q Consensus 73 ~~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~-L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 150 (665)
-.+++.|+|++|.+.+.+|+..|.++++|+. +.+++|+|+.++| .|.++++|++|++++|+|++..+..+....++..
T Consensus 53 l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~ 132 (350)
T 4ay9_X 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVL 132 (350)
T ss_dssp CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEE
T ss_pred CCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhh
Confidence 3689999999999988899888999999875 6677899999988 7899999999999999999666667777778888
Q ss_pred EEeec-ccccccCCccccCCC-ccCeeecccccccccCCCC-CCCCcceEecccccccccCCC-C-CcccCcCcccccCC
Q 005999 151 LDLSY-NNLTGLIPVNLTALD-RLYSLKLEWNRFSGTVPPL-NQPFLVVFNVSGNNLTGQVPE-T-PTLLKFDASSFSMN 225 (665)
Q Consensus 151 L~L~~-N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~l~~~~p~-~-~~l~~l~~~~~~~n 225 (665)
|++.+ |++....+..|..+. .|+.|+|++|+|+.+++.. ...+|+.|++++|+..+.+|. . ..+.+|..+++++|
T Consensus 133 l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N 212 (350)
T 4ay9_X 133 LDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRT 212 (350)
T ss_dssp EEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTS
T ss_pred hhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCC
Confidence 88865 567755555666665 6888999999998877765 667888899876443335553 2 56788888888888
Q ss_pred C
Q 005999 226 P 226 (665)
Q Consensus 226 ~ 226 (665)
.
T Consensus 213 ~ 213 (350)
T 4ay9_X 213 R 213 (350)
T ss_dssp C
T ss_pred C
Confidence 5
No 385
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.30 E-value=4.8e-14 Score=150.14 Aligned_cols=61 Identities=26% Similarity=0.327 Sum_probs=26.7
Q ss_pred CCCCEEEccCcccC-CcCc---ccccCCCCCCEEEeeccccc--c---cCCccccCCCccCeeecccccc
Q 005999 122 INLKSLSLSRNFFS-GAFP---LSILSLHRLTILDLSYNNLT--G---LIPVNLTALDRLYSLKLEWNRF 182 (665)
Q Consensus 122 ~~L~~L~Ls~N~l~-~~~p---~~~~~l~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l 182 (665)
++|++|+|++|+++ +.+| ..|..+++|+.|+|++|+|+ | .+|..+..+++|+.|+|++|.+
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l 228 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTF 228 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCC
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCC
Confidence 44444444444444 2233 23334444444444444444 1 2222444444444444444444
No 386
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.29 E-value=2.8e-13 Score=142.90 Aligned_cols=152 Identities=22% Similarity=0.268 Sum_probs=86.4
Q ss_pred CCEEEEEecCCCCcccCCc----cccCCCC-CCcEEEccCCcCccCCC-CCCCC-----CCCCEEEccCcccCCcCcccc
Q 005999 74 GRVVRFVLQSFGLRGTFPP----NTLTRLD-QLRVLSLHNNSLTGPIP-DLSSL-----INLKSLSLSRNFFSGAFPLSI 142 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~----~~~~~l~-~L~~L~L~~N~l~~~~p-~~~~l-----~~L~~L~Ls~N~l~~~~p~~~ 142 (665)
..++.|+|++|.++ .+++ ..+..++ +|+.|+|++|+|++..+ .+..+ ++|++|+|++|++++..+..+
T Consensus 22 ~~L~~L~Ls~n~l~-~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l 100 (362)
T 3goz_A 22 HGVTSLDLSLNNLY-SISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDEL 100 (362)
T ss_dssp TTCCEEECTTSCGG-GSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CCceEEEccCCCCC-hHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHH
Confidence 34667777777766 3443 3566666 67777777777766554 34333 667777777777765555543
Q ss_pred cC----C-CCCCEEEeecccccccCCcccc----C-CCccCeeecccccccccCCC----C--CC-CCcceEeccccccc
Q 005999 143 LS----L-HRLTILDLSYNNLTGLIPVNLT----A-LDRLYSLKLEWNRFSGTVPP----L--NQ-PFLVVFNVSGNNLT 205 (665)
Q Consensus 143 ~~----l-~~L~~L~L~~N~l~~~~p~~~~----~-l~~L~~L~l~~N~l~~~~~~----~--~~-~~L~~l~l~~N~l~ 205 (665)
.. + ++|+.|+|++|+|++..+..+. . .++|+.|+|++|++++.... . .. ++|+.|+|++|+++
T Consensus 101 ~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 101 VKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCc
Confidence 33 3 6677777777777655444332 2 24677777777766643221 1 22 26677777777666
Q ss_pred ccCCCC-----Ccc-cCcCcccccCCC
Q 005999 206 GQVPET-----PTL-LKFDASSFSMNP 226 (665)
Q Consensus 206 ~~~p~~-----~~l-~~l~~~~~~~n~ 226 (665)
+..+.. ... .+|..+++++|.
T Consensus 181 ~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 207 (362)
T 3goz_A 181 SKNCAELAKFLASIPASVTSLDLSANL 207 (362)
T ss_dssp GSCHHHHHHHHHTSCTTCCEEECTTSC
T ss_pred hhhHHHHHHHHHhCCCCCCEEECCCCC
Confidence 543311 112 355666666653
No 387
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.28 E-value=2e-13 Score=145.28 Aligned_cols=153 Identities=18% Similarity=0.199 Sum_probs=82.1
Q ss_pred CCEEEEEecCCCCcccCCc---cccCCCCCCcEEEccCC---cCccCCC-C-------CCCCCCCCEEEccCcccCC---
Q 005999 74 GRVVRFVLQSFGLRGTFPP---NTLTRLDQLRVLSLHNN---SLTGPIP-D-------LSSLINLKSLSLSRNFFSG--- 136 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~---~~~~~l~~L~~L~L~~N---~l~~~~p-~-------~~~l~~L~~L~Ls~N~l~~--- 136 (665)
..++.|+|++|++++..+. ..+..+++|+.|+|++| ++++.+| . +..+++|++|+|++|.|++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 3566666666666543211 13556666666666664 3333333 2 2456666666666666665
Q ss_pred -cCcccccCCCCCCEEEeecccccccCCcccc----CC---------CccCeeeccccccc-ccCCC----C-CCCCcce
Q 005999 137 -AFPLSILSLHRLTILDLSYNNLTGLIPVNLT----AL---------DRLYSLKLEWNRFS-GTVPP----L-NQPFLVV 196 (665)
Q Consensus 137 -~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~l~~N~l~-~~~~~----~-~~~~L~~ 196 (665)
.+|..+.++++|++|+|++|.|++..+..+. .+ ++|+.|+|++|+++ +.++. + .+++|+.
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 3555666666666666666666533332222 22 56666666666665 22221 1 4456666
Q ss_pred Eeccccccc--c---cCC-CCCcccCcCcccccCCC
Q 005999 197 FNVSGNNLT--G---QVP-ETPTLLKFDASSFSMNP 226 (665)
Q Consensus 197 l~l~~N~l~--~---~~p-~~~~l~~l~~~~~~~n~ 226 (665)
|++++|+++ | .+| ....+.+|..+++++|.
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~ 227 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNT 227 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSC
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCC
Confidence 666666665 2 223 33445555556665553
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.26 E-value=2.2e-14 Score=137.66 Aligned_cols=131 Identities=24% Similarity=0.249 Sum_probs=111.9
Q ss_pred cCCCCCCcEEEccCCcCccCCC-------CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccccccCCcccc
Q 005999 95 LTRLDQLRVLSLHNNSLTGPIP-------DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLT 167 (665)
Q Consensus 95 ~~~l~~L~~L~L~~N~l~~~~p-------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 167 (665)
+.....++.++|+.|.++|..| .|..+++|++|+|++|++++ +| .+.++++|+.|+|++|+|+ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 4556788888999999998877 37789999999999999995 88 9999999999999999999 7888888
Q ss_pred CCCccCeeecccccccccCCCC-CCCCcceEecccccccccCC--CCCcccCcCcccccCCCCCC
Q 005999 168 ALDRLYSLKLEWNRFSGTVPPL-NQPFLVVFNVSGNNLTGQVP--ETPTLLKFDASSFSMNPNLC 229 (665)
Q Consensus 168 ~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~l~l~~N~l~~~~p--~~~~l~~l~~~~~~~n~~lc 229 (665)
.+++|+.|+|++|++++.+ .+ .+++|+.|++++|++++..+ ....+.+|..+++++|+..|
T Consensus 91 ~~~~L~~L~L~~N~l~~l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~ 154 (198)
T 1ds9_A 91 VADTLEELWISYNQIASLS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp HHHHCSEEEEEEEECCCHH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHH
T ss_pred cCCcCCEEECcCCcCCcCC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccc
Confidence 8899999999999999865 44 78899999999999996432 34667889999999997543
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.23 E-value=1e-12 Score=138.64 Aligned_cols=148 Identities=20% Similarity=0.197 Sum_probs=119.7
Q ss_pred EEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-----CCCCCC-CCCEEEccCcccCCcCcccccCC-----C
Q 005999 78 RFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-----DLSSLI-NLKSLSLSRNFFSGAFPLSILSL-----H 146 (665)
Q Consensus 78 ~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-----~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~ 146 (665)
.++|+.|+++|.+|. .+...++|+.|+|++|.|++..+ .|..++ +|++|+|++|+|++..+..|..+ +
T Consensus 2 ~~~ls~n~~~~~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEE-FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHH-HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHH-HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 367899999988775 67777779999999999998875 467788 99999999999998888888775 9
Q ss_pred CCCEEEeecccccccCCccccC----C-CccCeeecccccccccCCCC------C-CCCcceEecccccccccCCCC---
Q 005999 147 RLTILDLSYNNLTGLIPVNLTA----L-DRLYSLKLEWNRFSGTVPPL------N-QPFLVVFNVSGNNLTGQVPET--- 211 (665)
Q Consensus 147 ~L~~L~L~~N~l~~~~p~~~~~----l-~~L~~L~l~~N~l~~~~~~~------~-~~~L~~l~l~~N~l~~~~p~~--- 211 (665)
+|++|+|++|+|++..+..+.. + ++|+.|+|++|++++..+.. . .++|++|+|++|+|+...+..
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 9999999999999877775544 4 89999999999998876642 2 368999999999999532210
Q ss_pred --Ccc-cCcCcccccCCC
Q 005999 212 --PTL-LKFDASSFSMNP 226 (665)
Q Consensus 212 --~~l-~~l~~~~~~~n~ 226 (665)
..+ .+|..+++++|.
T Consensus 161 ~l~~~~~~L~~L~Ls~n~ 178 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNN 178 (362)
T ss_dssp HHHTSCTTCCEEECTTSC
T ss_pred HHhcCCccccEeeecCCC
Confidence 122 378888888874
No 390
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.08 E-value=2.1e-10 Score=114.97 Aligned_cols=132 Identities=17% Similarity=0.061 Sum_probs=100.9
Q ss_pred HhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCCeeeeeEEEEeCCeEEEEEEecCCCCH
Q 005999 396 LLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPNLVPIRAYFQAKGERLVIYDYQPNGSL 474 (665)
Q Consensus 396 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 474 (665)
.++.|+.+.||++... +..+++|+...... .....+.+|+++++.+ .|..+.++++++...+..++||||++|.+|
T Consensus 21 ~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l 97 (263)
T 3tm0_A 21 DTEGMSPAKVYKLVGE-NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLC 97 (263)
T ss_dssp CCSCCSSSEEEEEECS-SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEH
T ss_pred eccCCCCCeEEEEECC-CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeeh
Confidence 4677788999999755 56889999865321 1123477888888877 367788899999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-------------------------------------------
Q 005999 475 FNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA------------------------------------------- 511 (665)
Q Consensus 475 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~------------------------------------------- 511 (665)
.+.+.. ......++.+++++|+.||+.
T Consensus 98 ~~~~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T 3tm0_A 98 SEEYED----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP 167 (263)
T ss_dssp HHHCCT----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred hhccCC----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence 876321 112346788999999999981
Q ss_pred ---------------CCeeccCCCCCceEeCCCCceEEeecccc
Q 005999 512 ---------------SWLIHGNLKSSNVLLGADFEARLTDYCLS 540 (665)
Q Consensus 512 ---------------~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~ 540 (665)
..++|+|+++.||+++++..+.|+||+.+
T Consensus 168 ~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a 211 (263)
T 3tm0_A 168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp HHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred HHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence 11789999999999987655679999765
No 391
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.05 E-value=4e-12 Score=138.47 Aligned_cols=154 Identities=18% Similarity=0.115 Sum_probs=112.5
Q ss_pred CCEEEEEecCCCCccc----CCccccCCCCCCcEEEccCCcCccC----CC-CCCCCCCCCEEEccCcccCCcCcccccC
Q 005999 74 GRVVRFVLQSFGLRGT----FPPNTLTRLDQLRVLSLHNNSLTGP----IP-DLSSLINLKSLSLSRNFFSGAFPLSILS 144 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~----l~~~~~~~l~~L~~L~L~~N~l~~~----~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 144 (665)
..++.|+|++|.+++. +.+..+..+++|+.|+|++|+++.. ++ .+..+++|++|+|++|.+++..+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 6788999999988753 2233445688999999999998873 23 5667888999999999887554444433
Q ss_pred -----CCCCCEEEeeccccccc----CCccccCCCccCeeecccccccccCCCC-------CCCCcceEecccccccc--
Q 005999 145 -----LHRLTILDLSYNNLTGL----IPVNLTALDRLYSLKLEWNRFSGTVPPL-------NQPFLVVFNVSGNNLTG-- 206 (665)
Q Consensus 145 -----l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~~-------~~~~L~~l~l~~N~l~~-- 206 (665)
.++|+.|+|++|.+++. +|..+..+++|+.|+|++|++++..+.. ..++|+.|++++|++++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 386 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS 386 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhh
Confidence 36889999999988865 4566777888999999999887654321 15688999999998885
Q ss_pred --cCCC-CCcccCcCcccccCCCC
Q 005999 207 --QVPE-TPTLLKFDASSFSMNPN 227 (665)
Q Consensus 207 --~~p~-~~~l~~l~~~~~~~n~~ 227 (665)
.+|. ...+.+|..+++++|+.
T Consensus 387 ~~~l~~~l~~~~~L~~L~l~~N~i 410 (461)
T 1z7x_W 387 CSSLAATLLANHSLRELDLSNNCL 410 (461)
T ss_dssp HHHHHHHHHHCCCCCEEECCSSSC
T ss_pred HHHHHHHHHhCCCccEEECCCCCC
Confidence 4442 23466788888888853
No 392
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.05 E-value=2.3e-12 Score=140.32 Aligned_cols=152 Identities=18% Similarity=0.121 Sum_probs=120.2
Q ss_pred CCEEEEEecCCCCccc----CCccccCCCCCCcEEEccCCcCccCC-----C-CCCCCCCCCEEEccCcccCCc----Cc
Q 005999 74 GRVVRFVLQSFGLRGT----FPPNTLTRLDQLRVLSLHNNSLTGPI-----P-DLSSLINLKSLSLSRNFFSGA----FP 139 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~----l~~~~~~~l~~L~~L~L~~N~l~~~~-----p-~~~~l~~L~~L~Ls~N~l~~~----~p 139 (665)
.+++.|+|++|++++. ++. .+..+++|+.|+|++|.++... + -+..+++|++|+|++|++++. ++
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~-~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 277 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCG-IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHH-HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHH-HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHH
Confidence 4899999999999963 454 6888999999999999998642 2 244689999999999999954 78
Q ss_pred ccccCCCCCCEEEeecccccccCCccccC-----CCccCeeecccccccccC----CCC--CCCCcceEecccccccccC
Q 005999 140 LSILSLHRLTILDLSYNNLTGLIPVNLTA-----LDRLYSLKLEWNRFSGTV----PPL--NQPFLVVFNVSGNNLTGQV 208 (665)
Q Consensus 140 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~~~----~~~--~~~~L~~l~l~~N~l~~~~ 208 (665)
..+.++++|+.|+|++|.+++..+..+.. .++|+.|++++|.+++.. +.. .+++|+.|++++|++++..
T Consensus 278 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 88888999999999999998655544433 369999999999998752 222 5689999999999998653
Q ss_pred CCC------CcccCcCcccccCCC
Q 005999 209 PET------PTLLKFDASSFSMNP 226 (665)
Q Consensus 209 p~~------~~l~~l~~~~~~~n~ 226 (665)
+.. ....+|..+++++|.
T Consensus 358 ~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 358 VRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHHHHcCCCCceEEEECCCCC
Confidence 311 114578888898884
No 393
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.96 E-value=1.5e-12 Score=129.58 Aligned_cols=146 Identities=16% Similarity=0.114 Sum_probs=80.8
Q ss_pred CCccccceeecCC--CEEEEEecC---CCCcccCCccccCCCCCCcEEEccCCcCccCCC--CCCCCCCCCE--EEccCc
Q 005999 62 DYCQWQGVKCAQG--RVVRFVLQS---FGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP--DLSSLINLKS--LSLSRN 132 (665)
Q Consensus 62 ~~C~w~gv~C~~~--~v~~l~l~~---~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~--L~Ls~N 132 (665)
..|+|.|+.|+.. +|..+...+ ..+.|.++++.+..++. .|...+|..++.++ .|...+.|.. ++++.|
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 3689999999863 777666655 34555666544433332 22222333333322 2333444444 555666
Q ss_pred ccC---CcCcccccCCCCCCEEEeecccccc--cCCccccCCCccCeeecccccccccCCCCCCC--CcceEeccccccc
Q 005999 133 FFS---GAFPLSILSLHRLTILDLSYNNLTG--LIPVNLTALDRLYSLKLEWNRFSGTVPPLNQP--FLVVFNVSGNNLT 205 (665)
Q Consensus 133 ~l~---~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~--~L~~l~l~~N~l~ 205 (665)
+.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++...-..+. +|+.|+|++|.++
T Consensus 154 ~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 154 RRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp SHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEECTTSTTG
T ss_pred HHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEEccCCcCc
Confidence 433 2222222456667777777777765 34455566677777777777776652111222 6777777777777
Q ss_pred ccCC
Q 005999 206 GQVP 209 (665)
Q Consensus 206 ~~~p 209 (665)
+.+|
T Consensus 234 ~~~~ 237 (267)
T 3rw6_A 234 DTFR 237 (267)
T ss_dssp GGCS
T ss_pred cccC
Confidence 6655
No 394
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.95 E-value=5.9e-10 Score=111.21 Aligned_cols=125 Identities=11% Similarity=0.104 Sum_probs=93.2
Q ss_pred CcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCC--eeeeeEEEEeCCeEEEEEEecCCCCHH
Q 005999 398 GRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPN--LVPIRAYFQAKGERLVIYDYQPNGSLF 475 (665)
Q Consensus 398 g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~ 475 (665)
+.|..+.||++...+|..+++|...... ...+.+|+++++.+.+.+ +.+++++...++..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~-----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCccc-----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 3556699999987777789999976541 134677888888775444 556888888888899999999998884
Q ss_pred HHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------------
Q 005999 476 NLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS------------------------------------------- 512 (665)
Q Consensus 476 ~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~------------------------------------------- 512 (665)
... .+ ...++.+++..|+.||+..
T Consensus 104 --~~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T 1nd4_A 104 --SSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 170 (264)
T ss_dssp --TSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred --cCc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence 211 11 1256777888888888643
Q ss_pred --------------CeeccCCCCCceEeCCCCceEEeecccc
Q 005999 513 --------------WLIHGNLKSSNVLLGADFEARLTDYCLS 540 (665)
Q Consensus 513 --------------~iiH~Dlk~~Nill~~~~~~kl~Dfgl~ 540 (665)
.++|+|++|.||+++++..+.|+||+.+
T Consensus 171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a 212 (264)
T 1nd4_A 171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRL 212 (264)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhc
Confidence 1899999999999987766779999875
No 395
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.92 E-value=3.2e-09 Score=110.04 Aligned_cols=41 Identities=10% Similarity=0.338 Sum_probs=32.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP 116 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p 116 (665)
..++.|+|++ +++ .|++..|.++++|+.|+|++|.+..+.+
T Consensus 101 ~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~ 141 (329)
T 3sb4_A 101 QTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLP 141 (329)
T ss_dssp TTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECT
T ss_pred CCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccch
Confidence 5788888888 888 7888889999999999999998755444
No 396
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.90 E-value=2.4e-09 Score=112.49 Aligned_cols=139 Identities=18% Similarity=0.277 Sum_probs=102.1
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEec--CCCchhhHHHHHHHHHHHHhCCC--CCCeeeeeEEEEeC---CeEEEEEE
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFD--ANKTADTSAEAFEQHMEAVGGLS--HPNLVPIRAYFQAK---GERLVIYD 467 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~e 467 (665)
+.++.|.++.||+....++ .+++|+.. .... ......+.+|+++++.+. +..+.++++++.+. +..++|||
T Consensus 44 ~~l~~G~sn~~y~v~~~~~-~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPGQ-TYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EECCC-CCSCEEEEECSSC-EEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEcCCcccceEEEEEECCc-eEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4588999999999987654 67778765 3221 122346778888888886 45578888888776 45899999
Q ss_pred ecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC------------------------------------
Q 005999 468 YQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA------------------------------------ 511 (665)
Q Consensus 468 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~------------------------------------ 511 (665)
|++|..+.+. ....++...+..++.++++.|+.||+.
T Consensus 122 ~v~G~~l~~~-------~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 122 FVSGRVLWDQ-------SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp CCCCBCCCCT-------TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred ecCCeecCCC-------ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 9999777431 112367888889999999999999972
Q ss_pred ---------------------CCeeccCCCCCceEeCCCCc--eEEeecccccc
Q 005999 512 ---------------------SWLIHGNLKSSNVLLGADFE--ARLTDYCLSVL 542 (665)
Q Consensus 512 ---------------------~~iiH~Dlk~~Nill~~~~~--~kl~Dfgl~~~ 542 (665)
..++|+|+++.||+++.++. +.|.||+.+..
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 23899999999999997753 68999998754
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.90 E-value=4.9e-11 Score=125.78 Aligned_cols=153 Identities=16% Similarity=0.122 Sum_probs=80.9
Q ss_pred CCEEEEEecCCCCcccCCc---cccC-CCCCCcEEEccCCcCccCCC-CC-CCCCCCCEEEccCcccCCcCcccc-----
Q 005999 74 GRVVRFVLQSFGLRGTFPP---NTLT-RLDQLRVLSLHNNSLTGPIP-DL-SSLINLKSLSLSRNFFSGAFPLSI----- 142 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~---~~~~-~l~~L~~L~L~~N~l~~~~p-~~-~~l~~L~~L~Ls~N~l~~~~p~~~----- 142 (665)
..++.|+|++|.++..-.. ..+. ..++|+.|+|++|.|+.... .+ ..+++|+.|+|++|+|+..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 4566777777776632111 0122 22567777777776654322 22 234566777777777664333333
Q ss_pred cCCCCCCEEEeecccccc----cCCccccCCCccCeeecccccccccC----CC-C-CCCCcceEecccccccccC----
Q 005999 143 LSLHRLTILDLSYNNLTG----LIPVNLTALDRLYSLKLEWNRFSGTV----PP-L-NQPFLVVFNVSGNNLTGQV---- 208 (665)
Q Consensus 143 ~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~----~~-~-~~~~L~~l~l~~N~l~~~~---- 208 (665)
...++|+.|+|++|.|+. .++..+..+++|++|+|++|+|+... .. . ..++|+.|+|++|.|+..-
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 234567777777776653 23333455666777777777665421 11 1 3446677777777665321
Q ss_pred CC-CCcccCcCcccccCCC
Q 005999 209 PE-TPTLLKFDASSFSMNP 226 (665)
Q Consensus 209 p~-~~~l~~l~~~~~~~n~ 226 (665)
+. .....+|..+++++|+
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~ 250 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNE 250 (372)
T ss_dssp HHHHHHCSSCCEEECTTSS
T ss_pred HHHHHhCCCCCEEeccCCC
Confidence 10 0123456666666664
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.85 E-value=3.5e-09 Score=109.74 Aligned_cols=62 Identities=10% Similarity=0.103 Sum_probs=52.0
Q ss_pred CCCEEEEEecCCCCc----------c---------cCCccccCC--------CCCCcEEEccCCcCccCCC-CCCCCCCC
Q 005999 73 QGRVVRFVLQSFGLR----------G---------TFPPNTLTR--------LDQLRVLSLHNNSLTGPIP-DLSSLINL 124 (665)
Q Consensus 73 ~~~v~~l~l~~~~l~----------g---------~l~~~~~~~--------l~~L~~L~L~~N~l~~~~p-~~~~l~~L 124 (665)
..+++.|||++|++. + .||+..|.+ +++|+.|+|.+ +++.+.+ .|.+|++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 457888888888777 1 467778888 99999999999 8988887 79999999
Q ss_pred CEEEccCcccC
Q 005999 125 KSLSLSRNFFS 135 (665)
Q Consensus 125 ~~L~Ls~N~l~ 135 (665)
+.|+|++|.+.
T Consensus 127 ~~l~l~~n~i~ 137 (329)
T 3sb4_A 127 KICQIRKKTAP 137 (329)
T ss_dssp CEEEBCCSSCC
T ss_pred ceEEcCCCCcc
Confidence 99999999875
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.83 E-value=2.9e-11 Score=127.58 Aligned_cols=134 Identities=22% Similarity=0.188 Sum_probs=104.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CC-----CCCCCCCEEEccCcccCC----cCccccc
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DL-----SSLINLKSLSLSRNFFSG----AFPLSIL 143 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~-----~~l~~L~~L~Ls~N~l~~----~~p~~~~ 143 (665)
..++.|+|++|+++..-.......+++|+.|+|++|+|+.... .+ ...++|+.|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 5899999999999753332223346789999999999976543 22 356899999999999974 3556668
Q ss_pred CCCCCCEEEeeccccccc----CCccccCCCccCeeecccccccccCCC-----C-CCCCcceEeccccccccc
Q 005999 144 SLHRLTILDLSYNNLTGL----IPVNLTALDRLYSLKLEWNRFSGTVPP-----L-NQPFLVVFNVSGNNLTGQ 207 (665)
Q Consensus 144 ~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~-----~-~~~~L~~l~l~~N~l~~~ 207 (665)
.+++|++|||++|.|+.. ++..+..+++|+.|+|++|.|+..... . ..++|++|+|++|.|+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 899999999999999853 355677888999999999999854221 1 457899999999999853
No 400
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.62 E-value=8.4e-09 Score=105.60 Aligned_cols=180 Identities=14% Similarity=0.110 Sum_probs=116.2
Q ss_pred HhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-CCCC--eeeeeEEEEeCC---eEEEEEEec
Q 005999 396 LLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-SHPN--LVPIRAYFQAKG---ERLVIYDYQ 469 (665)
Q Consensus 396 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~n--iv~l~~~~~~~~---~~~lv~e~~ 469 (665)
.++.|.+..||+.. ..+++|+.... .....+.+|+++++.+ .+.. +.+++.+....+ ..|+||||+
T Consensus 27 ~~~~G~~n~v~~v~----~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 27 ISGEGNDCIAYEIN----RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp EEEECSSEEEEEST----TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred ecCCCCcceEEEEC----CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 47899999999863 35778875432 3456788899998877 3333 344544443332 347899999
Q ss_pred CCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------------------------------------
Q 005999 470 PNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA-------------------------------------- 511 (665)
Q Consensus 470 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~-------------------------------------- 511 (665)
+|.+|.+... ..++..++..++.+++..++.||+.
T Consensus 99 ~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 99 KGVPLTPLLL-------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp CCEECCHHHH-------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred CCeECCcccc-------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 9988875332 2356677778888888888888851
Q ss_pred -------------------CCeeccCCCCCceEeCC--CCceEEeecccccccCCCCCCCCCCCcc---cCCcccc----
Q 005999 512 -------------------SWLIHGNLKSSNVLLGA--DFEARLTDYCLSVLSDSSSVEDPDTVAY---KAPEIRK---- 563 (665)
Q Consensus 512 -------------------~~iiH~Dlk~~Nill~~--~~~~kl~Dfgl~~~~~~~~~~~~gt~~y---~aPE~~~---- 563 (665)
..++|+|+++.||++++ ...+.|+||+.+...+..... .....+ ..|+...
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDF-ISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHH-HTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHH-HHHHhhccccCHHHHHHHHH
Confidence 12699999999999998 456789999987654331100 000000 1222110
Q ss_pred CCC---------CCCCcchHHHHHHHHHHHHhCCCCC
Q 005999 564 SSR---------RATSKSDVYAFGVLLLELLTGKHPS 591 (665)
Q Consensus 564 ~~~---------~~~~k~DvwSlGvvl~elltg~~P~ 591 (665)
..+ ......+.|++|.++|++.+|..+|
T Consensus 251 ~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 251 HYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 000 0112358999999999999998764
No 401
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.59 E-value=2.5e-09 Score=120.16 Aligned_cols=153 Identities=11% Similarity=0.066 Sum_probs=103.6
Q ss_pred CCEEEEEec-----------CCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCC-CCCCCEEEcc----CcccCC
Q 005999 74 GRVVRFVLQ-----------SFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSS-LINLKSLSLS----RNFFSG 136 (665)
Q Consensus 74 ~~v~~l~l~-----------~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~-l~~L~~L~Ls----~N~l~~ 136 (665)
.+++.|+|+ .+.+++.-....+..+++|+.|+|+.|++++..+ .++. +++|+.|+|+ .|.+++
T Consensus 342 ~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~ 421 (592)
T 3ogk_B 342 KQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421 (592)
T ss_dssp TTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS
T ss_pred CCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC
Confidence 578888888 3566643222234557888888888888877555 4544 7888888885 777875
Q ss_pred c-----CcccccCCCCCCEEEeec--ccccccCCccccC-CCccCeeeccccccccc-CCCC--CCCCcceEeccccccc
Q 005999 137 A-----FPLSILSLHRLTILDLSY--NNLTGLIPVNLTA-LDRLYSLKLEWNRFSGT-VPPL--NQPFLVVFNVSGNNLT 205 (665)
Q Consensus 137 ~-----~p~~~~~l~~L~~L~L~~--N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~-~~~~--~~~~L~~l~l~~N~l~ 205 (665)
. ++..+.++++|+.|+|++ |.+++..+..+.. +++|+.|+|++|++++. ++.. .+++|+.|++++|+|+
T Consensus 422 ~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 501 (592)
T 3ogk_B 422 LPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFS 501 (592)
T ss_dssp CCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCB
T ss_pred chHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCc
Confidence 3 444466788888888874 3466555555543 77888888888888752 2322 6678888888888876
Q ss_pred cc-CCCC-CcccCcCcccccCCC
Q 005999 206 GQ-VPET-PTLLKFDASSFSMNP 226 (665)
Q Consensus 206 ~~-~p~~-~~l~~l~~~~~~~n~ 226 (665)
+. ++.. ..+++|..+++++|.
T Consensus 502 ~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 502 ERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHHHHHHHHhcCccCeeECcCCc
Confidence 43 2221 346677788888876
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.53 E-value=3.1e-09 Score=105.58 Aligned_cols=113 Identities=22% Similarity=0.191 Sum_probs=72.5
Q ss_pred CCCcccCCccccCCCCCCcE--EEccCCcCcc---CCC-CCCCCCCCCEEEccCcccCC--cCcccccCCCCCCEEEeec
Q 005999 84 FGLRGTFPPNTLTRLDQLRV--LSLHNNSLTG---PIP-DLSSLINLKSLSLSRNFFSG--AFPLSILSLHRLTILDLSY 155 (665)
Q Consensus 84 ~~l~g~l~~~~~~~l~~L~~--L~L~~N~l~~---~~p-~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~ 155 (665)
|...+.+.-+.|...+.|.. ++++.|+... ..+ ...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++
T Consensus 126 n~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~ 205 (267)
T 3rw6_A 126 DGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSG 205 (267)
T ss_dssp ETTTTEEECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTT
T ss_pred chhccccCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCC
Confidence 33333333333444555555 6677774332 222 12467888888888888886 5556777888888888888
Q ss_pred ccccccCCccccCCC--ccCeeecccccccccCCCC---------CCCCcceEe
Q 005999 156 NNLTGLIPVNLTALD--RLYSLKLEWNRFSGTVPPL---------NQPFLVVFN 198 (665)
Q Consensus 156 N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~~~~---------~~~~L~~l~ 198 (665)
|+|++. ..+..+. +|++|+|++|.+++.+|.. .+++|+.||
T Consensus 206 N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 206 NELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp SCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred CccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 888854 3344444 8888888888888766531 455666554
No 403
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.51 E-value=8e-09 Score=116.01 Aligned_cols=102 Identities=10% Similarity=0.036 Sum_probs=63.7
Q ss_pred EEEEEecCCC-Ccc-cCCccccCCCCCCcEEEccCCcCccCCC-----CCCCCCCCCEEEccCcccC----CcCcccccC
Q 005999 76 VVRFVLQSFG-LRG-TFPPNTLTRLDQLRVLSLHNNSLTGPIP-----DLSSLINLKSLSLSRNFFS----GAFPLSILS 144 (665)
Q Consensus 76 v~~l~l~~~~-l~g-~l~~~~~~~l~~L~~L~L~~N~l~~~~p-----~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~ 144 (665)
++.|+|+++. ++. .++. .+.++++|+.|+|++|.+++... .+.++++|+.|+|++|.++ +.++..+.+
T Consensus 140 L~~L~L~~~~~~~~~~l~~-~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLS-IVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp CCEEEEESCEEEEHHHHHH-HHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred CcEEECcCCCCcCHHHHHH-HHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 7777777765 221 1111 23467777777777777765422 2345677777777777776 344445566
Q ss_pred CCCCCEEEeecccccccCCccccCCCccCeeeccc
Q 005999 145 LHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEW 179 (665)
Q Consensus 145 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 179 (665)
+++|+.|+|++|.+.+ +|..+..+++|+.|++++
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 7777777777777764 555666666666666654
No 404
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.40 E-value=5.5e-07 Score=92.75 Aligned_cols=130 Identities=15% Similarity=0.121 Sum_probs=93.6
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCC----CCeeeeeEEEEeCCeEEEEEEecC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSH----PNLVPIRAYFQAKGERLVIYDYQP 470 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~~~~~~~~lv~e~~~ 470 (665)
+.++.|....||+. +..+++|+.... .....+.+|.+++..+.+ -.+.+++++ +..++||||++
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~----~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~ 110 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRD----SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIK 110 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSH----HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCC
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcH----HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecC
Confidence 45889999999998 456777876332 223457889888877765 224445554 56789999999
Q ss_pred CCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------------
Q 005999 471 NGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS-------------------------------------- 512 (665)
Q Consensus 471 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~-------------------------------------- 512 (665)
|.++.+... ..++..++..++.+++..++.||+..
T Consensus 111 G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 111 GERITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp CBCCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred Ccccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 988864322 12566667777888888888888532
Q ss_pred ------------------------CeeccCCCCCceEeCCCCceEEeeccccccc
Q 005999 513 ------------------------WLIHGNLKSSNVLLGADFEARLTDYCLSVLS 543 (665)
Q Consensus 513 ------------------------~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~ 543 (665)
.++|+|+++.||+++.+..+.|.||+.+...
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 1489999999999998666799999987543
No 405
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.33 E-value=2.5e-08 Score=112.01 Aligned_cols=153 Identities=11% Similarity=0.040 Sum_probs=87.0
Q ss_pred CCEEEEEec---------CCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCC-CCCCCCEEEcc--C----cccCC
Q 005999 74 GRVVRFVLQ---------SFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLS-SLINLKSLSLS--R----NFFSG 136 (665)
Q Consensus 74 ~~v~~l~l~---------~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~-~l~~L~~L~Ls--~----N~l~~ 136 (665)
.+++.|+|. .+.+++.-.......+++|+.|+++.|++++... .+. .+++|+.|+|+ + |.+++
T Consensus 338 ~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~ 417 (594)
T 2p1m_B 338 KDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL 417 (594)
T ss_dssp TTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC
T ss_pred CCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC
Confidence 567777773 3344432222112236777777777777765443 333 46777777777 3 45552
Q ss_pred -----cCcccccCCCCCCEEEeecccccccCCccccC-CCccCeeecccccccccCCCC---CCCCcceEeccccccccc
Q 005999 137 -----AFPLSILSLHRLTILDLSYNNLTGLIPVNLTA-LDRLYSLKLEWNRFSGTVPPL---NQPFLVVFNVSGNNLTGQ 207 (665)
Q Consensus 137 -----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~~~~---~~~~L~~l~l~~N~l~~~ 207 (665)
.++..+.++++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..... .+++|+.|+|++|.+++.
T Consensus 418 ~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~ 496 (594)
T 2p1m_B 418 EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDK 496 (594)
T ss_dssp CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHH
T ss_pred CchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHH
Confidence 1222255667777777765 555444444544 667777777777765432221 456777777777777533
Q ss_pred CC--CCCcccCcCcccccCCCC
Q 005999 208 VP--ETPTLLKFDASSFSMNPN 227 (665)
Q Consensus 208 ~p--~~~~l~~l~~~~~~~n~~ 227 (665)
.. ....+.+|..+++++|+.
T Consensus 497 ~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 497 ALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHHHHHhCCCCCEEeeeCCCC
Confidence 21 113456677777766653
No 406
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.30 E-value=6.3e-08 Score=91.29 Aligned_cols=112 Identities=16% Similarity=0.175 Sum_probs=67.3
Q ss_pred ccCCCCCCcEEEccCC-cCccCC-----CCCCCCCCCCEEEccCcccCC----cCcccccCCCCCCEEEeeccccccc--
Q 005999 94 TLTRLDQLRVLSLHNN-SLTGPI-----PDLSSLINLKSLSLSRNFFSG----AFPLSILSLHRLTILDLSYNNLTGL-- 161 (665)
Q Consensus 94 ~~~~l~~L~~L~L~~N-~l~~~~-----p~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~-- 161 (665)
.+...+.|+.|+|++| .|.... ..+...++|++|+|++|+|.. .+...+...++|++|+|++|.|...
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4556667777777776 665321 134555677777777777663 2334444556677777777777632
Q ss_pred --CCccccCCCccCeeec--ccccccccCC----CC--CCCCcceEeccccccc
Q 005999 162 --IPVNLTALDRLYSLKL--EWNRFSGTVP----PL--NQPFLVVFNVSGNNLT 205 (665)
Q Consensus 162 --~p~~~~~l~~L~~L~l--~~N~l~~~~~----~~--~~~~L~~l~l~~N~l~ 205 (665)
+...+...++|+.|+| ++|.+...-. .. ..++|+.|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3345556667777777 6677654311 11 3456777777777765
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.26 E-value=3.7e-07 Score=95.31 Aligned_cols=149 Identities=16% Similarity=0.108 Sum_probs=87.3
Q ss_pred CCEEEEEecCCCCc---------ccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCccccc-
Q 005999 74 GRVVRFVLQSFGLR---------GTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSIL- 143 (665)
Q Consensus 74 ~~v~~l~l~~~~l~---------g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~- 143 (665)
.+++.|.+.++... +.+.+ .+..+++|+.|+|++|.-... +.+. +++|+.|+|..|.++......+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~-ll~~~P~L~~L~L~g~~~l~l-~~~~-~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSP-VLDAMPLLNNLKIKGTNNLSI-GKKP-RPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHH-HHHTCTTCCEEEEECCBTCBC-CSCB-CTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHH-HHhcCCCCcEEEEeCCCCcee-cccc-CCCCcEEEEecCCCChHHHHHHHH
Confidence 46777777654331 12332 456677888888877731122 2233 67888888887777644334443
Q ss_pred -CCCCCCEEEeec--cccccc-----CCccc--cCCCccCeeecccccccccCCC-----CCCCCcceEeccccccccc-
Q 005999 144 -SLHRLTILDLSY--NNLTGL-----IPVNL--TALDRLYSLKLEWNRFSGTVPP-----LNQPFLVVFNVSGNNLTGQ- 207 (665)
Q Consensus 144 -~l~~L~~L~L~~--N~l~~~-----~p~~~--~~l~~L~~L~l~~N~l~~~~~~-----~~~~~L~~l~l~~N~l~~~- 207 (665)
.+++|+.|+|+. |...+. +...+ ..+++|+.|+|.+|.+....+. ..+++|++|+|+.|.|+..
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G 295 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEG 295 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHH
Confidence 678888888753 222111 11122 2467888888888777643211 1467788888888887652
Q ss_pred ---CCCC-CcccCcCcccccCC
Q 005999 208 ---VPET-PTLLKFDASSFSMN 225 (665)
Q Consensus 208 ---~p~~-~~l~~l~~~~~~~n 225 (665)
++.. ..+.+|..+++++|
T Consensus 296 ~~~L~~~L~~l~~L~~L~L~~n 317 (362)
T 2ra8_A 296 ARLLLDHVDKIKHLKFINMKYN 317 (362)
T ss_dssp HHHHHTTHHHHTTCSEEECCSB
T ss_pred HHHHHhhcccCCcceEEECCCC
Confidence 2222 34566777777666
No 408
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.25 E-value=1.9e-08 Score=112.99 Aligned_cols=152 Identities=14% Similarity=0.032 Sum_probs=97.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccC---------CcCccCCC-CCC-CCCCCCEEEccCcccCCcCcccc
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHN---------NSLTGPIP-DLS-SLINLKSLSLSRNFFSGAFPLSI 142 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~---------N~l~~~~p-~~~-~l~~L~~L~Ls~N~l~~~~p~~~ 142 (665)
.+++.|+|.++ +...-.+.....+++|+.|+|++ |.+++... .+. .+++|+.|+++.|++++..+..+
T Consensus 314 ~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l 392 (594)
T 2p1m_B 314 PKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITI 392 (594)
T ss_dssp TTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHH
T ss_pred CCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHH
Confidence 57888888877 44222221333578888888843 44543222 222 47888888888888887666666
Q ss_pred c-CCCCCCEEEee--c----cccccc-----CCccccCCCccCeeecccccccccCCCC---CCCCcceEeccccccccc
Q 005999 143 L-SLHRLTILDLS--Y----NNLTGL-----IPVNLTALDRLYSLKLEWNRFSGTVPPL---NQPFLVVFNVSGNNLTGQ 207 (665)
Q Consensus 143 ~-~l~~L~~L~L~--~----N~l~~~-----~p~~~~~l~~L~~L~l~~N~l~~~~~~~---~~~~L~~l~l~~N~l~~~ 207 (665)
. .+++|+.|+|+ + |.+++. ++..+..+++|+.|+|++ .+++..... .+++|+.|++++|.+++.
T Consensus 393 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~ 471 (594)
T 2p1m_B 393 ARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDL 471 (594)
T ss_dssp HHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHH
T ss_pred HhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHH
Confidence 5 48888999998 4 556522 112256678888998876 555433222 367888999998888653
Q ss_pred CC-CC-CcccCcCcccccCCCC
Q 005999 208 VP-ET-PTLLKFDASSFSMNPN 227 (665)
Q Consensus 208 ~p-~~-~~l~~l~~~~~~~n~~ 227 (665)
.+ .. ..+++|..+++++|+.
T Consensus 472 ~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 472 GMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHHHHhcCCCcCEEECcCCCC
Confidence 22 11 3356788888888864
No 409
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.23 E-value=4.4e-06 Score=88.67 Aligned_cols=124 Identities=14% Similarity=0.165 Sum_probs=74.0
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 75 RVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 75 ~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
.++.++|.+ .+. .|....|.++++|+.++|++|+++.+.. .|. ..+|+.+.|.+| ++..-...|.++++|+.|+|
T Consensus 158 ~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 158 TVQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred CceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 477777775 666 6777778888888888888887777666 444 467777777643 55344456666777777777
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEeccccccc
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLT 205 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~ 205 (665)
..| ++..-...|.+ .+|+.+.| .|.++.+.... .+++|+.+++.+|.+.
T Consensus 234 ~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 234 PEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp CTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred CCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 654 44233333433 45555555 33344333332 4555555555555443
No 410
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.18 E-value=7.6e-06 Score=83.55 Aligned_cols=133 Identities=16% Similarity=0.092 Sum_probs=90.2
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCC---CeeeeeEEEE-eCCeEEEEEEecC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHP---NLVPIRAYFQ-AKGERLVIYDYQP 470 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~ 470 (665)
+.++.|....||+. +..+++|+... ......+.+|.++++.+.+. .+.+++.+.. ..+..++||||++
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 34788888899988 34577777422 23456788999999988653 3566777764 4566889999999
Q ss_pred CCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------------
Q 005999 471 NGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRAS-------------------------------------- 512 (665)
Q Consensus 471 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~-------------------------------------- 512 (665)
|.++.+..- ..++......++.++++.|+.||+..
T Consensus 97 G~~l~~~~~-------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 97 GQILGEDGM-------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp SEECHHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred CeECchhhh-------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 988876321 11344444455555555555555321
Q ss_pred ---------------------CeeccCCCCCceEeCC---CCc-eEEeecccccc
Q 005999 513 ---------------------WLIHGNLKSSNVLLGA---DFE-ARLTDYCLSVL 542 (665)
Q Consensus 513 ---------------------~iiH~Dlk~~Nill~~---~~~-~kl~Dfgl~~~ 542 (665)
.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2589999999999997 455 48999987643
No 411
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.17 E-value=6.4e-06 Score=87.39 Aligned_cols=144 Identities=14% Similarity=0.082 Sum_probs=95.6
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEE
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILD 152 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 152 (665)
..++.++|++|+++ .|+...|. ..+|+.+.|.+| ++.+.. .|.++++|+.|+|..| ++..-...|.+ .+|+.++
T Consensus 180 ~~L~~l~l~~n~l~-~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~ 254 (401)
T 4fdw_A 180 YNLKKADLSKTKIT-KLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVK 254 (401)
T ss_dssp TTCCEEECTTSCCS-EECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEE
T ss_pred ccCCeeecCCCcce-EechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEE
Confidence 57889999999998 78887777 588999999854 776666 7888889999998875 55333445555 6788888
Q ss_pred eecccccccCCccccCCCccCeeeccccccc-----ccCCCC--CCCCcceEecccccccccCCCC-CcccCcCcccccC
Q 005999 153 LSYNNLTGLIPVNLTALDRLYSLKLEWNRFS-----GTVPPL--NQPFLVVFNVSGNNLTGQVPET-PTLLKFDASSFSM 224 (665)
Q Consensus 153 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-----~~~~~~--~~~~L~~l~l~~N~l~~~~p~~-~~l~~l~~~~~~~ 224 (665)
| .|.++..-+..|.+|++|+.+.+.+|.+. .+.+.. .+++|+.++|.+ .++..-... ..+.+|..+.+..
T Consensus 255 l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~ 332 (401)
T 4fdw_A 255 L-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPA 332 (401)
T ss_dssp E-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECT
T ss_pred e-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECc
Confidence 7 45566455667777788888887777665 222222 667777777773 354222211 2234455555533
No 412
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.17 E-value=6.4e-06 Score=82.31 Aligned_cols=130 Identities=17% Similarity=0.176 Sum_probs=90.7
Q ss_pred hCcccce-EEEEEEEC-CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCC-CCCeeeeeEEEEeCCeEEEEEEecCCCC
Q 005999 397 LGRGSIG-TTYKAVLD-NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS-HPNLVPIRAYFQAKGERLVIYDYQPNGS 473 (665)
Q Consensus 397 lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gs 473 (665)
+..|..| .||+.... ++..+++|+-... ....+.+|...|+.+. +--+.++++++.+.+..++|||+++|.+
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS-----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH-----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC-----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 4445554 68987744 5667888886432 3456778888887663 3346778999999999999999999988
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC------------------------------------------
Q 005999 474 LFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRA------------------------------------------ 511 (665)
Q Consensus 474 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~------------------------------------------ 511 (665)
+.+..... ......+..+++..|+.||..
T Consensus 107 ~~~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (272)
T 4gkh_A 107 AFQVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVE 177 (272)
T ss_dssp HHHHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHH
T ss_pred ccccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHH
Confidence 87765421 112234555666666666621
Q ss_pred ---------C------CeeccCCCCCceEeCCCCceEEeecccc
Q 005999 512 ---------S------WLIHGNLKSSNVLLGADFEARLTDYCLS 540 (665)
Q Consensus 512 ---------~------~iiH~Dlk~~Nill~~~~~~kl~Dfgl~ 540 (665)
. -++|+|+.+.||++++++.+-|.||+.+
T Consensus 178 ~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a 221 (272)
T 4gkh_A 178 QVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRV 221 (272)
T ss_dssp HHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred HHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccc
Confidence 0 1689999999999998777779999865
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.15 E-value=1.5e-07 Score=88.59 Aligned_cols=110 Identities=18% Similarity=0.200 Sum_probs=86.6
Q ss_pred CCCEEEEEecCC-CCccc----CCccccCCCCCCcEEEccCCcCccCCC-----CCCCCCCCCEEEccCcccCCc----C
Q 005999 73 QGRVVRFVLQSF-GLRGT----FPPNTLTRLDQLRVLSLHNNSLTGPIP-----DLSSLINLKSLSLSRNFFSGA----F 138 (665)
Q Consensus 73 ~~~v~~l~l~~~-~l~g~----l~~~~~~~l~~L~~L~L~~N~l~~~~p-----~~~~l~~L~~L~Ls~N~l~~~----~ 138 (665)
...++.|+|++| ++... +.. .+...++|++|+|++|.|..... .+...+.|++|+|++|.|+.. +
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~-~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l 113 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAE-ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 113 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHH-HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHH-HHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHH
Confidence 368999999999 88742 333 57778999999999999975321 345568899999999999853 5
Q ss_pred cccccCCCCCCEEEe--eccccccc----CCccccCCCccCeeeccccccc
Q 005999 139 PLSILSLHRLTILDL--SYNNLTGL----IPVNLTALDRLYSLKLEWNRFS 183 (665)
Q Consensus 139 p~~~~~l~~L~~L~L--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 183 (665)
...+...++|+.|+| ++|.|... +...+...++|+.|+|++|.+.
T Consensus 114 ~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 114 VEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 667888889999999 88999844 3344566789999999999885
No 414
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.12 E-value=6.5e-07 Score=93.47 Aligned_cols=129 Identities=16% Similarity=0.155 Sum_probs=92.9
Q ss_pred CCCEEEEEecCCC-CcccCCccccCCCCCCcEEEccCCcCccCCC-CC--CCCCCCCEEEccC--cccCCc-----Cccc
Q 005999 73 QGRVVRFVLQSFG-LRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DL--SSLINLKSLSLSR--NFFSGA-----FPLS 141 (665)
Q Consensus 73 ~~~v~~l~l~~~~-l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~--~~l~~L~~L~Ls~--N~l~~~-----~p~~ 141 (665)
...++.|+|+++. + .+++ +. +++|+.|+|..+.++...- .+ ..+++|+.|+|+. |...+. +...
T Consensus 171 ~P~L~~L~L~g~~~l--~l~~--~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~ 245 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNL--SIGK--KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPL 245 (362)
T ss_dssp CTTCCEEEEECCBTC--BCCS--CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGG
T ss_pred CCCCcEEEEeCCCCc--eecc--cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHH
Confidence 3689999998873 3 3544 43 8999999999988764332 23 3789999999863 332221 1122
Q ss_pred c--cCCCCCCEEEeecccccccCCcccc---CCCccCeeeccccccccc----CCCC--CCCCcceEecccccccc
Q 005999 142 I--LSLHRLTILDLSYNNLTGLIPVNLT---ALDRLYSLKLEWNRFSGT----VPPL--NQPFLVVFNVSGNNLTG 206 (665)
Q Consensus 142 ~--~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~~~----~~~~--~~~~L~~l~l~~N~l~~ 206 (665)
+ ..+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.|++. ++.. .+++|+.|+|++|.++.
T Consensus 246 l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 246 FSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp SCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 3 2578999999999999865444443 578999999999999873 2221 57899999999998874
No 415
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.02 E-value=1.3e-05 Score=80.87 Aligned_cols=74 Identities=11% Similarity=0.121 Sum_probs=57.6
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCC---CeeeeeEEEEeCCeEEEEEEecCC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHP---NLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
+.|+.|.++.||++...+|..+++|+..... ......|..|++.|+.+++. .+++++++. ..++||||+++
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 4589999999999999889999999965432 12235678999999999765 577777763 36899999999
Q ss_pred CCH
Q 005999 472 GSL 474 (665)
Q Consensus 472 gsL 474 (665)
+++
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 874
No 416
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.97 E-value=1.6e-05 Score=83.10 Aligned_cols=72 Identities=7% Similarity=-0.008 Sum_probs=52.2
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCC--eeeeeEEEEeC-CeEEEEEEecCC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPN--LVPIRAYFQAK-GERLVIYDYQPN 471 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~~~ 471 (665)
+.++.|....+|+.... +..+++|..... ..+..|+.++..+.... +.++++++... +..++||||++|
T Consensus 47 ~~l~gG~~n~~y~v~~~-g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDVG-GRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEECSSEEEEEEEET-TEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred EECCCCCcceEEEEEEC-CcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 35788999999998864 567888877432 14677888887775433 55677777654 678999999998
Q ss_pred CCH
Q 005999 472 GSL 474 (665)
Q Consensus 472 gsL 474 (665)
.++
T Consensus 119 ~~l 121 (362)
T 3ovc_A 119 VTL 121 (362)
T ss_dssp EET
T ss_pred CCc
Confidence 655
No 417
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.84 E-value=1.4e-05 Score=83.49 Aligned_cols=81 Identities=10% Similarity=0.026 Sum_probs=52.3
Q ss_pred hHh-CcccceEEEEEEEC-------CeEEEEEEEecCCCc-hhhHHHHHHHHHHHHhCCC-C--CCeeeeeEEEEeC---
Q 005999 395 ELL-GRGSIGTTYKAVLD-------NHLIVTVKRFDANKT-ADTSAEAFEQHMEAVGGLS-H--PNLVPIRAYFQAK--- 459 (665)
Q Consensus 395 ~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~--- 459 (665)
+.| +.|....+|+.... ++..+++|+...... .......+.+|+.+++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 346 78889999998764 266788887654320 0001134566777776663 2 3466778877655
Q ss_pred CeEEEEEEecCCCCHH
Q 005999 460 GERLVIYDYQPNGSLF 475 (665)
Q Consensus 460 ~~~~lv~e~~~~gsL~ 475 (665)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 4578999999986653
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.74 E-value=0.0003 Score=72.50 Aligned_cols=138 Identities=17% Similarity=0.221 Sum_probs=75.9
Q ss_pred HhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhC-----CCCCCeeeee-E--EEEeCCeEEEEEE
Q 005999 396 LLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGG-----LSHPNLVPIR-A--YFQAKGERLVIYD 467 (665)
Q Consensus 396 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~-----l~h~niv~l~-~--~~~~~~~~~lv~e 467 (665)
.|+.|..+.||+....++. +++|+..... +.+..|++++.. +..|.++... | +....+..+++||
T Consensus 39 ~l~gG~~n~~~~v~~~~~~-~vlk~~~~~~------~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSGA-VCLKRIHRPE------KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp ECC----CEEEEEEETTEE-EEEEEECSCH------HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eccccccCcEEEEEeCCCC-EEEEecCCCH------HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 4666778999999887775 8889886521 122233333332 3334444311 1 2234677899999
Q ss_pred ecCCCCHH--------------HHHhcCCC-C--C------CCCCCHHHHH-----------------------------
Q 005999 468 YQPNGSLF--------------NLIHGSRS-I--R------AKPLHWTSCL----------------------------- 495 (665)
Q Consensus 468 ~~~~gsL~--------------~~l~~~~~-~--~------~~~l~~~~~~----------------------------- 495 (665)
|++|.++. ..+|.... . . ...-.|...+
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 11221100 0 0 0112332211
Q ss_pred --HHHHHHHHHHHHHHh------------CCCeeccCCCCCceEeCCCCceEEeecccc
Q 005999 496 --KIAEDVAQGLAYIHR------------ASWLIHGNLKSSNVLLGADFEARLTDYCLS 540 (665)
Q Consensus 496 --~i~~~i~~~L~yLH~------------~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~ 540 (665)
.+...+..++++|++ ...++|+|+++.||+++.++.+.|+||+.+
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a 250 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTV 250 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhc
Confidence 111123345666652 223899999999999988889999999865
No 419
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.48 E-value=0.0003 Score=74.40 Aligned_cols=76 Identities=7% Similarity=0.061 Sum_probs=46.4
Q ss_pred hHhCcccceEEEEEEEC-CeEEEEEEEecCCCc--h---hhHHHHHHHHHHHHhCCCC--CC-eeeeeEEEEeCCeEEEE
Q 005999 395 ELLGRGSIGTTYKAVLD-NHLIVTVKRFDANKT--A---DTSAEAFEQHMEAVGGLSH--PN-LVPIRAYFQAKGERLVI 465 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~---~~~~~~~~~e~~~l~~l~h--~n-iv~l~~~~~~~~~~~lv 465 (665)
+.+|.|.++.||++... ++..+++|....... . ....+.+..|.++++.+.. +. +.+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 46899999999999743 467889997653221 0 0122345667777766532 33 4455543 34456899
Q ss_pred EEecCCC
Q 005999 466 YDYQPNG 472 (665)
Q Consensus 466 ~e~~~~g 472 (665)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999874
No 420
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.24 E-value=0.00094 Score=67.89 Aligned_cols=74 Identities=14% Similarity=0.120 Sum_probs=56.8
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCC---CCCeeeeeEEEEeCCeEEEEEEecCC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS---HPNLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
+.|+.|.+..+|+.... +..+++|+.... ....+..|.+.|+.|. ...+.+++++....+..++||||+++
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 35788999999998764 556778886532 2456788888887773 35688889988888899999999998
Q ss_pred CCH
Q 005999 472 GSL 474 (665)
Q Consensus 472 gsL 474 (665)
..+
T Consensus 116 ~~~ 118 (312)
T 3jr1_A 116 SKN 118 (312)
T ss_dssp CCC
T ss_pred CCC
Confidence 754
No 421
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.22 E-value=0.00012 Score=67.34 Aligned_cols=81 Identities=10% Similarity=0.098 Sum_probs=39.8
Q ss_pred CCcEEEccCCcCccCC-CCCCCCCCCCEEEccCcc-cCCcCcccccCC----CCCCEEEeeccc-ccccCCccccCCCcc
Q 005999 100 QLRVLSLHNNSLTGPI-PDLSSLINLKSLSLSRNF-FSGAFPLSILSL----HRLTILDLSYNN-LTGLIPVNLTALDRL 172 (665)
Q Consensus 100 ~L~~L~L~~N~l~~~~-p~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~L 172 (665)
.|+.|||+++.++..- ..+.++++|+.|+|+++. ++..-=..+..+ ++|+.|+|+++. ++..-=..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 4566666665554322 134556666666666653 443222233333 246666666643 542211234455555
Q ss_pred Ceeecccc
Q 005999 173 YSLKLEWN 180 (665)
Q Consensus 173 ~~L~l~~N 180 (665)
+.|+|++.
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555544
No 422
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.17 E-value=0.003 Score=59.53 Aligned_cols=101 Identities=11% Similarity=0.080 Sum_probs=67.8
Q ss_pred CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCeeccCCCCCceEeCCCCceEEeecccccccCCCCCCCC
Q 005999 473 SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIH-RASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSVEDP 551 (665)
Q Consensus 473 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH-~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~ 551 (665)
+|.+.|.. .+.++++.++|.++.|.+.+|.-+- ++. -..+=+.|..|++..+|.|...+ ..+. .
T Consensus 34 SL~eIL~~----~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------~ 98 (229)
T 2yle_A 34 SLEEILRL----YNQPINEEQAWAVCYQCCGSLRAAARRRQ-PRHRVRSAAQIRVWRDGAVTLAP-AADD---------A 98 (229)
T ss_dssp EHHHHHHH----HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred cHHHHHHH----cCCCcCHHHHHHHHHHHHHHHHhhhhccc-CCceecCCcceEEecCCceeccc-cccc---------c
Confidence 79999875 4678999999999999999987762 222 12333457899999999988764 1110 1
Q ss_pred CCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCC
Q 005999 552 DTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHP 590 (665)
Q Consensus 552 gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P 590 (665)
....+.|||... ...+.+.-|||+|+++|.-+--..|
T Consensus 99 ~~~~~~~pe~~~--~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 99 GEPPPVAGKLGY--SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp --------CCSS--SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred cccCCCChhhcc--ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 223467888763 3567899999999999998864333
No 423
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.16 E-value=0.00093 Score=70.48 Aligned_cols=113 Identities=10% Similarity=0.097 Sum_probs=77.4
Q ss_pred cCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccccccCCcccc
Q 005999 89 TFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLT 167 (665)
Q Consensus 89 ~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 167 (665)
.+....|.++.+|+.+.+.++..+ +.. .|.++++|+.+.+. +.++..-...|.++.+|+.++|..| ++..-..+|.
T Consensus 255 ~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~ 331 (394)
T 4gt6_A 255 RIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFA 331 (394)
T ss_dssp EECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred EcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhh
Confidence 344557888888888888765543 333 67888888888886 4455344456777888888888754 5544456778
Q ss_pred CCCccCeeecccccccccCCCC--CCCCcceEeccccccc
Q 005999 168 ALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGNNLT 205 (665)
Q Consensus 168 ~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N~l~ 205 (665)
+|.+|+.+.|..+ ++.+.... ++.+|+.+++.+|...
T Consensus 332 ~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 332 GCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp TCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH
T ss_pred CCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee
Confidence 8888888888654 55443332 7788888888877543
No 424
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.04 E-value=0.0013 Score=65.98 Aligned_cols=74 Identities=11% Similarity=0.144 Sum_probs=51.1
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCC---CeeeeeEEEEeCCeEEEEEEecCC
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHP---NLVPIRAYFQAKGERLVIYDYQPN 471 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~~ 471 (665)
+.+|.|..+.||+.+..+|+.+++|+...... .....|..|++.|+.|... .+.+++++ + ..++||||+++
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~l~~ 94 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEECCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCc--chhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEeecc
Confidence 35799999999999999999999998654432 2234577888877766321 24445543 2 24789999987
Q ss_pred CCH
Q 005999 472 GSL 474 (665)
Q Consensus 472 gsL 474 (665)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 643
No 425
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.92 E-value=0.00095 Score=58.35 Aligned_cols=54 Identities=19% Similarity=0.175 Sum_probs=24.4
Q ss_pred EEEccCCcCc--cCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccc
Q 005999 103 VLSLHNNSLT--GPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNL 158 (665)
Q Consensus 103 ~L~L~~N~l~--~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 158 (665)
.++.++++|+ .++..+. ++|+.|+|++|+|+..-+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4555555555 3332221 2455555555555532233344444455544444443
No 426
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.90 E-value=0.0055 Score=62.57 Aligned_cols=73 Identities=11% Similarity=0.126 Sum_probs=45.5
Q ss_pred hCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCC--CeeeeeEE-----EEeCCeEEEEEEec
Q 005999 397 LGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHP--NLVPIRAY-----FQAKGERLVIYDYQ 469 (665)
Q Consensus 397 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~-----~~~~~~~~lv~e~~ 469 (665)
++ |....||+....+|+.+++|....... ..+.+..|..++..+... .+++++.. ....+..++++||+
T Consensus 34 l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~---~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 34 LN-SYENRVYQFQDEDRRRFVVKFYRPERW---TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EC-CSSSEEEEECCTTCCCEEEEEECTTTS---CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred ec-CcccceEEEEcCCCCEEEEEEcCCCCC---CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 55 778899998777777788999864321 223455566666555211 23444432 23356678899999
Q ss_pred CCCC
Q 005999 470 PNGS 473 (665)
Q Consensus 470 ~~gs 473 (665)
+|..
T Consensus 110 ~G~~ 113 (328)
T 1zyl_A 110 GGRQ 113 (328)
T ss_dssp CCEE
T ss_pred CCCC
Confidence 8754
No 427
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.89 E-value=0.0011 Score=67.08 Aligned_cols=28 Identities=18% Similarity=0.157 Sum_probs=23.8
Q ss_pred eeccCCCCCceEeCCCCceEEeecccccc
Q 005999 514 LIHGNLKSSNVLLGADFEARLTDYCLSVL 542 (665)
Q Consensus 514 iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~ 542 (665)
++|+|+.+.||+ ..++.+.++||..+..
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 799999999999 5667889999987643
No 428
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.88 E-value=0.0038 Score=66.36 Aligned_cols=77 Identities=18% Similarity=0.170 Sum_probs=45.7
Q ss_pred hCCCeeccCCCCCceEeCCCCceEEeecccccccCCCCCCC----CCCCcccCCccccCCC--CCCCcchHHHHHHHHHH
Q 005999 510 RASWLIHGNLKSSNVLLGADFEARLTDYCLSVLSDSSSVED----PDTVAYKAPEIRKSSR--RATSKSDVYAFGVLLLE 583 (665)
Q Consensus 510 ~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~~~~~~~~~----~gt~~y~aPE~~~~~~--~~~~k~DvwSlGvvl~e 583 (665)
... ++|+|+++.|||++.++ +++.||+.+...+...... .-...|.+|+...... ......++......+|+
T Consensus 231 ~~~-liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQA-LIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCE-EECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCe-EEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 344 89999999999999876 9999998875433210000 0012355555443110 11123455677888887
Q ss_pred HHhCC
Q 005999 584 LLTGK 588 (665)
Q Consensus 584 lltg~ 588 (665)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.81 E-value=0.00037 Score=64.03 Aligned_cols=83 Identities=11% Similarity=0.016 Sum_probs=63.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCc-CccCCC-CCCCC----CCCCEEEccCcc-cCCcCcccccCCC
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNS-LTGPIP-DLSSL----INLKSLSLSRNF-FSGAFPLSILSLH 146 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~-l~~~~p-~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~ 146 (665)
-+++.|||+++.++..=- ..+.++++|+.|+|+++. |+..-- .++.+ ++|++|+|+++. ++..-=..+.+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL-~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~ 139 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGF-DHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFR 139 (176)
T ss_dssp CCEEEEEEESCCCCGGGG-GGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCT
T ss_pred ceEeEEeCcCCCccHHHH-HHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCC
Confidence 479999999999874322 257899999999999985 664322 35554 479999999974 8754445678899
Q ss_pred CCCEEEeeccc
Q 005999 147 RLTILDLSYNN 157 (665)
Q Consensus 147 ~L~~L~L~~N~ 157 (665)
+|+.|+|++..
T Consensus 140 ~L~~L~L~~c~ 150 (176)
T 3e4g_A 140 NLKYLFLSDLP 150 (176)
T ss_dssp TCCEEEEESCT
T ss_pred CCCEEECCCCC
Confidence 99999999864
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.74 E-value=0.0021 Score=56.08 Aligned_cols=55 Identities=25% Similarity=0.265 Sum_probs=28.8
Q ss_pred EEEecCCCCc-ccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccC
Q 005999 78 RFVLQSFGLR-GTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFS 135 (665)
Q Consensus 78 ~l~l~~~~l~-g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~ 135 (665)
.++.++++|+ ..+|.. + -++|+.|+|++|+|+.+++ .|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~-l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTA-F--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSC-C--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCC-C--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4455555554 234431 1 1245666666666665555 4555666666666666543
No 431
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.74 E-value=0.0047 Score=64.56 Aligned_cols=104 Identities=9% Similarity=0.112 Sum_probs=54.4
Q ss_pred ccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCcc
Q 005999 94 TLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRL 172 (665)
Q Consensus 94 ~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 172 (665)
.+....+|+.+.+..+ ++.+.. .|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.++++|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 4555566666665443 333333 4556666666666554 44233344555666666666433 332333445556666
Q ss_pred CeeecccccccccCCCC--CCCCcceEecc
Q 005999 173 YSLKLEWNRFSGTVPPL--NQPFLVVFNVS 200 (665)
Q Consensus 173 ~~L~l~~N~l~~~~~~~--~~~~L~~l~l~ 200 (665)
+.+.+.+|.++.+.... ++.+|+.++|.
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp 318 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLP 318 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECC
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcC
Confidence 66666655555444433 55556666554
No 432
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.71 E-value=0.0045 Score=65.20 Aligned_cols=81 Identities=14% Similarity=0.096 Sum_probs=41.8
Q ss_pred CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeecccccccCCccccCCCccCeeecccccccccCCCC--CCCCc
Q 005999 117 DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFL 194 (665)
Q Consensus 117 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L 194 (665)
.|.++.+|+.+.+.++..+ .-...|.++.+|+.+.+. +.++..-...|.++.+|+.+.|..| ++.+.... ++.+|
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L 336 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL 336 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC
Confidence 4556666666666544433 334455556666666664 3344333345555666666666543 33333322 45556
Q ss_pred ceEecc
Q 005999 195 VVFNVS 200 (665)
Q Consensus 195 ~~l~l~ 200 (665)
+.+.+.
T Consensus 337 ~~i~ip 342 (394)
T 4gt6_A 337 ERIAIP 342 (394)
T ss_dssp CEEEEC
T ss_pred CEEEEC
Confidence 666554
No 433
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.60 E-value=0.0045 Score=64.72 Aligned_cols=122 Identities=16% Similarity=0.099 Sum_probs=92.3
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 75 RVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 75 ~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
.++.+.+..+ +. .+....+.++..|+.+.+..+ ++.+.. .|.++.+|+.+.+..+ +...-...|.++.+|+.+++
T Consensus 218 ~l~~i~~~~~-~~-~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 218 NLKKITITSG-VT-TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SCSEEECCTT-CC-EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEE
T ss_pred ccceeeeccc-ee-EEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccc
Confidence 4666666543 44 566678899999999999876 666666 7889999999999765 55344557888999999999
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEeccc
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSG 201 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~ 201 (665)
.+|.++..-...|.++.+|+.+.|..+ ++.+.... ++.+|+.+.+..
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 999888666678899999999999755 55544433 677888776643
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.60 E-value=0.011 Score=60.16 Aligned_cols=141 Identities=14% Similarity=0.230 Sum_probs=74.2
Q ss_pred hHhCcccceEEEEEEECCeEEEEEEEecCCCchhhHHHHHHHHHHHHhCC-----CCCCeeeee-E--EEEeCCeEEEEE
Q 005999 395 ELLGRGSIGTTYKAVLDNHLIVTVKRFDANKTADTSAEAFEQHMEAVGGL-----SHPNLVPIR-A--YFQAKGERLVIY 466 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~-~--~~~~~~~~~lv~ 466 (665)
+.|+.|....+|+....++ .+++|....... .+.+..|+.++..+ .-|.++... | +....+..++++
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~----~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~ 102 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRVE----KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALI 102 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEE
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCCC----HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEE
Confidence 3467788899999987766 577888765211 12234455555444 223333211 1 122346778999
Q ss_pred EecCCCCHH--------------HHHhcC-CCCCCC---C---CCHHHHHH------------HHHHHHHHHHHHHhC--
Q 005999 467 DYQPNGSLF--------------NLIHGS-RSIRAK---P---LHWTSCLK------------IAEDVAQGLAYIHRA-- 511 (665)
Q Consensus 467 e~~~~gsL~--------------~~l~~~-~~~~~~---~---l~~~~~~~------------i~~~i~~~L~yLH~~-- 511 (665)
+|++|..+. ..+|.. ...... . ..|...+. +...+...++++++.
T Consensus 103 ~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~ 182 (322)
T 2ppq_A 103 SFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWP 182 (322)
T ss_dssp ECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCC
T ss_pred EeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCc
Confidence 999986431 112211 000000 0 12322111 011244455666531
Q ss_pred ----CCeeccCCCCCceEeCCCCceEEeecccc
Q 005999 512 ----SWLIHGNLKSSNVLLGADFEARLTDYCLS 540 (665)
Q Consensus 512 ----~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~ 540 (665)
..++|+|+++.||+++++..+.|+||+.+
T Consensus 183 ~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a 215 (322)
T 2ppq_A 183 KDLPAGVIHADLFQDNVFFLGDELSGLIDFYFA 215 (322)
T ss_dssp CSSCEEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred ccCCcccCCCCCCccCEEEeCCceEEEecchhc
Confidence 12899999999999998755689999765
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.53 E-value=0.0052 Score=62.97 Aligned_cols=30 Identities=17% Similarity=0.327 Sum_probs=25.7
Q ss_pred eeccCCCCCceEeCCC----CceEEeeccccccc
Q 005999 514 LIHGNLKSSNVLLGAD----FEARLTDYCLSVLS 543 (665)
Q Consensus 514 iiH~Dlk~~Nill~~~----~~~kl~Dfgl~~~~ 543 (665)
++|+|+.+.||+++.+ +.+.|.||+.+...
T Consensus 185 lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 185 FVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp EECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred eEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 8999999999999875 67999999876543
No 436
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.52 E-value=0.0086 Score=62.99 Aligned_cols=121 Identities=13% Similarity=0.063 Sum_probs=68.5
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEee
Q 005999 75 RVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLS 154 (665)
Q Consensus 75 ~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 154 (665)
.++.+.+... ++ .|....+..+..|+.+.+..+...-....|..+..|+.+.+..+.+. ...|..+.+|+.+.+.
T Consensus 231 ~l~~i~ip~~-~~-~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~ 305 (394)
T 4fs7_A 231 GVKNIIIPDS-FT-ELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLL 305 (394)
T ss_dssp CCCEEEECTT-CC-EECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEEC
T ss_pred CCceEEECCC-ce-ecccccccccccceeEEcCCCcceeeccccccccccceeccCceeec---cccccccccccccccc
Confidence 5666666543 33 45556777788888888876654322225666666666666555432 2345556666666665
Q ss_pred cccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccc
Q 005999 155 YNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGN 202 (665)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N 202 (665)
+| ++..-...|.++.+|+.++|.++ ++.+.... ++.+|+.+++..|
T Consensus 306 ~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 306 DS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred cc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 43 44333445666666666666533 44333332 5566666666544
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.43 E-value=0.0046 Score=64.57 Aligned_cols=138 Identities=14% Similarity=0.183 Sum_probs=77.4
Q ss_pred HhCcccceEEEEEEEC--------CeEEEEEEEecCCCchhhHHHHHHHHHHHHhCCC-CCCeeeeeEEEEeCCeEEEEE
Q 005999 396 LLGRGSIGTTYKAVLD--------NHLIVTVKRFDANKTADTSAEAFEQHMEAVGGLS-HPNLVPIRAYFQAKGERLVIY 466 (665)
Q Consensus 396 ~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 466 (665)
.+..|-...+|+.... ++..+++|+..... .....+.+|.++++.+. +.-..++++++.+ .+|+
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL---QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc---chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 4667888889998864 24678888863321 22345567888877663 2223556666543 2899
Q ss_pred EecCCCCHH-----------------HHHhcCCCCCCCCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 005999 467 DYQPNGSLF-----------------NLIHGSRSIRAKPLH--WTSCLKIAEDVAQ-------------------GLAYI 508 (665)
Q Consensus 467 e~~~~gsL~-----------------~~l~~~~~~~~~~l~--~~~~~~i~~~i~~-------------------~L~yL 508 (665)
||++|.+|. ..+|.....-..... |.++.++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 999986542 112221111112222 4555555544322 23333
Q ss_pred H----hCC---CeeccCCCCCceEeCCC----CceEEeecccc
Q 005999 509 H----RAS---WLIHGNLKSSNVLLGAD----FEARLTDYCLS 540 (665)
Q Consensus 509 H----~~~---~iiH~Dlk~~Nill~~~----~~~kl~Dfgl~ 540 (665)
. ..+ .++|+|+.+.||+++.+ +.+.++||..+
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a 252 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYS 252 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTC
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccC
Confidence 2 211 28999999999999876 68999999765
No 438
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.36 E-value=0.006 Score=64.17 Aligned_cols=122 Identities=11% Similarity=0.040 Sum_probs=91.4
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCCcEEEccCCcCccCCCCCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEe
Q 005999 74 GRVVRFVLQSFGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIPDLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDL 153 (665)
Q Consensus 74 ~~v~~l~l~~~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 153 (665)
..++.+.+..+... +....|..+..|+.+.+..+.+.. ..|..+.+|+.+.+..+ ++..-...|.++.+|+.++|
T Consensus 253 ~~l~~~~~~~~~~~--i~~~~F~~~~~l~~~~~~~~~i~~--~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~l 327 (394)
T 4fs7_A 253 TDLESISIQNNKLR--IGGSLFYNCSGLKKVIYGSVIVPE--KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDL 327 (394)
T ss_dssp SSCCEEEECCTTCE--ECSCTTTTCTTCCEEEECSSEECT--TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECC
T ss_pred ccceeEEcCCCcce--eeccccccccccceeccCceeecc--ccccccccccccccccc-cceechhhhcCCCCCCEEEe
Confidence 45777788776443 666789999999999887765321 16888999999999765 66344567888999999999
Q ss_pred ecccccccCCccccCCCccCeeecccccccccCCCC--CCCCcceEecccc
Q 005999 154 SYNNLTGLIPVNLTALDRLYSLKLEWNRFSGTVPPL--NQPFLVVFNVSGN 202 (665)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~l~l~~N 202 (665)
.++ ++..-..+|.++++|+.+.+..| ++.+.... ++.+|+.+++..|
T Consensus 328 p~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 328 PYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred CCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 754 76455678889999999999877 66555443 7888999988654
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.14 E-value=0.00086 Score=62.82 Aligned_cols=85 Identities=14% Similarity=0.128 Sum_probs=41.8
Q ss_pred CCCCCCcEEEccCC-cCccCC-----CCCCCCCCCCEEEccCcccCC----cCcccccCCCCCCEEEeeccccccc----
Q 005999 96 TRLDQLRVLSLHNN-SLTGPI-----PDLSSLINLKSLSLSRNFFSG----AFPLSILSLHRLTILDLSYNNLTGL---- 161 (665)
Q Consensus 96 ~~l~~L~~L~L~~N-~l~~~~-----p~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~---- 161 (665)
.+=+.|+.|+|++| +|...- ..+..=+.|+.|+|++|+|.. .+-..+..-+.|+.|+|++|.|...
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 34455666666654 543210 123334556666666666652 2223333445566666666666522
Q ss_pred CCccccCCCccCeeecccc
Q 005999 162 IPVNLTALDRLYSLKLEWN 180 (665)
Q Consensus 162 ~p~~~~~l~~L~~L~l~~N 180 (665)
+-..+..-+.|+.|+|++|
T Consensus 118 la~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHTTTTCCCSEEECCCC
T ss_pred HHHHHhhCCceeEEECCCC
Confidence 1112333445666666543
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.77 E-value=0.0011 Score=62.07 Aligned_cols=110 Identities=9% Similarity=0.182 Sum_probs=73.5
Q ss_pred cCCCEEEEEecCC-CCcc----cCCccccCCCCCCcEEEccCCcCccCCC-C----CCCCCCCCEEEccCcccCC----c
Q 005999 72 AQGRVVRFVLQSF-GLRG----TFPPNTLTRLDQLRVLSLHNNSLTGPIP-D----LSSLINLKSLSLSRNFFSG----A 137 (665)
Q Consensus 72 ~~~~v~~l~l~~~-~l~g----~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~----~~~l~~L~~L~Ls~N~l~~----~ 137 (665)
.+..++.|+|++| ++.. .|-. .+..=+.|+.|+|++|+|...-- . +..=+.|+.|+|++|.|+. .
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~-aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIE-AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHH-HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHH-HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 3468999999985 6652 1222 56667899999999999974322 2 3344789999999999984 2
Q ss_pred CcccccCCCCCCEEEeecccc---ccc----CCccccCCCccCeeecccccc
Q 005999 138 FPLSILSLHRLTILDLSYNNL---TGL----IPVNLTALDRLYSLKLEWNRF 182 (665)
Q Consensus 138 ~p~~~~~l~~L~~L~L~~N~l---~~~----~p~~~~~l~~L~~L~l~~N~l 182 (665)
+-..+..-+.|+.|+|++|.. ... +-..+..-+.|+.|+++.|.+
T Consensus 118 la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 334455566799999987633 321 223344456677777766654
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.76 E-value=0.077 Score=54.36 Aligned_cols=29 Identities=28% Similarity=0.496 Sum_probs=25.9
Q ss_pred eeccCCCCCceEeCCCCceEEeecccccc
Q 005999 514 LIHGNLKSSNVLLGADFEARLTDYCLSVL 542 (665)
Q Consensus 514 iiH~Dlk~~Nill~~~~~~kl~Dfgl~~~ 542 (665)
++|+|+.+.||++++++.+.+.||+.+..
T Consensus 208 ~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 208 LCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp EECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred eEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 89999999999999888899999976643
No 442
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.73 E-value=0.029 Score=59.69 Aligned_cols=71 Identities=14% Similarity=0.126 Sum_probs=45.6
Q ss_pred hHhCcccceEEEEEEECC--------eEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCe-eeeeEEEEeCCeEEEE
Q 005999 395 ELLGRGSIGTTYKAVLDN--------HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL-VPIRAYFQAKGERLVI 465 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv 465 (665)
+.|+.|....+|++...+ +..+++|+...... .+.+..|..+++.+...++ .++++.+.+ .+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~----~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v 150 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET----ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRL 150 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC----HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc----HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEE
Confidence 357788889999998753 46788888743211 1334467777776633333 556666542 289
Q ss_pred EEecCCCC
Q 005999 466 YDYQPNGS 473 (665)
Q Consensus 466 ~e~~~~gs 473 (665)
+||++|.+
T Consensus 151 ~e~l~G~~ 158 (429)
T 1nw1_A 151 EEYIPSRP 158 (429)
T ss_dssp ECCCCEEE
T ss_pred EEEeCCcc
Confidence 99998643
No 443
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.26 E-value=0.11 Score=55.52 Aligned_cols=73 Identities=12% Similarity=0.113 Sum_probs=44.4
Q ss_pred hHhCcccceEEEEEEECC-eEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCCe-eeeeEEEEeCCeEEEEEEecCCC
Q 005999 395 ELLGRGSIGTTYKAVLDN-HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPNL-VPIRAYFQAKGERLVIYDYQPNG 472 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~g 472 (665)
+.|+.|-...+|+....+ +..+++|+.......... ..+|..++..|...++ .++++++. + .+|+||++|.
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~id---R~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~ 186 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIIN---REREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGY 186 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSC---HHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcC---HHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCc
Confidence 357788889999998875 467788887433211111 1467777777754444 45777663 2 2599999875
Q ss_pred CH
Q 005999 473 SL 474 (665)
Q Consensus 473 sL 474 (665)
+|
T Consensus 187 ~l 188 (458)
T 2qg7_A 187 AL 188 (458)
T ss_dssp EC
T ss_pred cC
Confidence 43
No 444
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.08 E-value=0.05 Score=56.48 Aligned_cols=72 Identities=11% Similarity=0.081 Sum_probs=40.0
Q ss_pred hHhCcccceEEEEEEECCe---------EEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCC-eeeeeEEEEeCCeEEE
Q 005999 395 ELLGRGSIGTTYKAVLDNH---------LIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPN-LVPIRAYFQAKGERLV 464 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~~---------~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~l 464 (665)
+.++.|....+|+....++ ..+++|+...... . ......|.++++.+...+ ..++++.+ .+ ++
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~--~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~~ 111 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD--E-LYNTISEFEVYKTMSKYKIAPQLLNTF--NG--GR 111 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG--G-TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc--c-eecHHHHHHHHHHHHhcCCCCceEEec--CC--cE
Confidence 3477888899999987642 5778887654321 1 111245666666553223 34566544 22 68
Q ss_pred EEEecCCCC
Q 005999 465 IYDYQPNGS 473 (665)
Q Consensus 465 v~e~~~~gs 473 (665)
||||++|.+
T Consensus 112 v~e~i~G~~ 120 (369)
T 3c5i_A 112 IEEWLYGDP 120 (369)
T ss_dssp EEECCCSEE
T ss_pred EEEEecCCc
Confidence 999998754
No 445
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=94.22 E-value=0.023 Score=37.17 Aligned_cols=29 Identities=21% Similarity=0.363 Sum_probs=18.8
Q ss_pred CccceeeehhHHHHHHHHHHHHHHHhhhh
Q 005999 278 KRRGLILGLSIGFAVLVSFLVCIFLLIRR 306 (665)
Q Consensus 278 ~~~~~i~gi~~g~~~~~~~~~~~~~~~~~ 306 (665)
.+.+.|+|+++|+++++++++.+.++++|
T Consensus 8 ls~GaIAGiVvG~v~gv~li~~l~~~~~r 36 (38)
T 2k1k_A 8 LTGGEIVAVIFGLLLGAALLLGILVFRSR 36 (38)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCceeeeehHHHHHHHHHHHHHHHHee
Confidence 34567888998888776655554444443
No 446
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=93.94 E-value=0.042 Score=37.07 Aligned_cols=30 Identities=20% Similarity=0.122 Sum_probs=13.1
Q ss_pred ceeeehhHHHHHHHHHHHHHHHhhhhhccC
Q 005999 281 GLILGLSIGFAVLVSFLVCIFLLIRRSSEG 310 (665)
Q Consensus 281 ~~i~gi~~g~~~~~~~~~~~~~~~~~~~~~ 310 (665)
..|++.++|.+++++++++.+++++|||+.
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 335555555444444444433333333333
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=93.73 E-value=0.07 Score=36.06 Aligned_cols=25 Identities=20% Similarity=0.109 Sum_probs=10.6
Q ss_pred eeehhHHHHHHHHHHHHHHHhhhhh
Q 005999 283 ILGLSIGFAVLVSFLVCIFLLIRRS 307 (665)
Q Consensus 283 i~gi~~g~~~~~~~~~~~~~~~~~~ 307 (665)
|++.++|.+++++++++++++++||
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhh
Confidence 5555555444433333333333333
No 448
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.67 E-value=0.088 Score=55.09 Aligned_cols=141 Identities=17% Similarity=0.195 Sum_probs=77.0
Q ss_pred HhCcccceEEEEEEECC--------eEEEEEEEecCCCch---------hhHH-------HHHHHHHHHHhCCC-CCCee
Q 005999 396 LLGRGSIGTTYKAVLDN--------HLIVTVKRFDANKTA---------DTSA-------EAFEQHMEAVGGLS-HPNLV 450 (665)
Q Consensus 396 ~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~---------~~~~-------~~~~~e~~~l~~l~-h~niv 450 (665)
.|..|-...+|+....+ ...|.+++.-..... ...+ +....|..+++.+. +.-..
T Consensus 59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P 138 (401)
T 3f2s_A 59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP 138 (401)
T ss_dssp EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence 46667788899987653 356777776432210 0011 12234777777663 33345
Q ss_pred eeeEEEEeCCeEEEEEEecCCCCHHH-----------------HHhcCCCCCCCCCC--HHHHHHHHHHHH---------
Q 005999 451 PIRAYFQAKGERLVIYDYQPNGSLFN-----------------LIHGSRSIRAKPLH--WTSCLKIAEDVA--------- 502 (665)
Q Consensus 451 ~l~~~~~~~~~~~lv~e~~~~gsL~~-----------------~l~~~~~~~~~~l~--~~~~~~i~~~i~--------- 502 (665)
++++++.+ + +|+||++|-+|.. .+|.....-..... |..+.++..++.
T Consensus 139 kl~~~~~~-G---~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~ 214 (401)
T 3f2s_A 139 KLYGIFPQ-G---RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESR 214 (401)
T ss_dssp CEEEEETT-E---EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHH
T ss_pred eEEEEeCC-C---eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhh
Confidence 67777643 2 8999998754411 12222111112222 334444443321
Q ss_pred -------------HHH----HHHHhCC---CeeccCCCCCceEeCCC------CceEEeecccc
Q 005999 503 -------------QGL----AYIHRAS---WLIHGNLKSSNVLLGAD------FEARLTDYCLS 540 (665)
Q Consensus 503 -------------~~L----~yLH~~~---~iiH~Dlk~~Nill~~~------~~~kl~Dfgl~ 540 (665)
.-+ ++|...+ -++|+|+.+.||+++.+ +.+.++||..+
T Consensus 215 ~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a 278 (401)
T 3f2s_A 215 IKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYS 278 (401)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTC
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccC
Confidence 112 2233221 27999999999999876 78999999654
No 449
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=92.54 E-value=0.066 Score=36.02 Aligned_cols=29 Identities=21% Similarity=0.351 Sum_probs=13.5
Q ss_pred ceeeehhHHHHHHHHHHHHHHHhhhhhccC
Q 005999 281 GLILGLSIGFAVLVSFLVCIFLLIRRSSEG 310 (665)
Q Consensus 281 ~~i~gi~~g~~~~~~~~~~~~~~~~~~~~~ 310 (665)
..++++++|++ ++++++++++++.|||+.
T Consensus 12 ~~Ia~~vVGvl-l~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 12 TSIISAVVGIL-LVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHCS
T ss_pred cchHHHHHHHH-HHHHHHHHHHhheehhhh
Confidence 34666777743 333333333344444333
No 450
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=90.94 E-value=0.32 Score=51.31 Aligned_cols=73 Identities=15% Similarity=0.097 Sum_probs=43.4
Q ss_pred hHhCcccceEEEEEEECC--------eEEEEEEEecCCCchhhHHHHHHHHHHHHhCCCCCC-eeeeeEEEEeCCeEEEE
Q 005999 395 ELLGRGSIGTTYKAVLDN--------HLIVTVKRFDANKTADTSAEAFEQHMEAVGGLSHPN-LVPIRAYFQAKGERLVI 465 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv 465 (665)
+.+..|-...+|+....+ +..+++|+....... .-+..+|..+++.+...+ ..++++.+ .+ ++|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~---~idR~~E~~~l~~L~~~gi~P~l~~~~--~~--~~I 148 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK---FYDSKVELDVFRYLSNINIAPNIIADF--PE--GRI 148 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C---CCCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch---hcCHHHHHHHHHHHHhcCCCCCEEEEc--CC--CEE
Confidence 346778889999998763 467888886443211 111245666665553222 34455543 22 689
Q ss_pred EEecCCCCH
Q 005999 466 YDYQPNGSL 474 (665)
Q Consensus 466 ~e~~~~gsL 474 (665)
+||++|.+|
T Consensus 149 ~efI~G~~l 157 (424)
T 3mes_A 149 EEFIDGEPL 157 (424)
T ss_dssp EECCCSEEC
T ss_pred EEEeCCccC
Confidence 999998653
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=83.32 E-value=3 Score=39.23 Aligned_cols=114 Identities=13% Similarity=0.094 Sum_probs=78.3
Q ss_pred CCCCeeeeeEEEEeCCeEEEEEEecCCCCHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHH-HHHhCCCeeccCCCCCc
Q 005999 445 SHPNLVPIRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLA-YIHRASWLIHGNLKSSN 523 (665)
Q Consensus 445 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~-yLH~~~~iiH~Dlk~~N 523 (665)
.||++ -...-.+++.+.+.|+.-+++.=+..++ .++...+++++..|+.... +++. -+|--|+|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~~---r~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSAR---RLIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCSS---SEECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhhC---ceeEEEeCce
Confidence 68888 4444466777777777654443333443 3677889998888887666 5543 4788899999
Q ss_pred eEeCCCCceEEeecccccccCCCCCCCCCCCcccCCccccCCCCCCCcchHH-HHHHHHHHHHhCCCCCC
Q 005999 524 VLLGADFEARLTDYCLSVLSDSSSVEDPDTVAYKAPEIRKSSRRATSKSDVY-AFGVLLLELLTGKHPSQ 592 (665)
Q Consensus 524 ill~~~~~~kl~Dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~k~Dvw-SlGvvl~elltg~~P~~ 592 (665)
+++|.++.+++.-.|+-. -++|.- .+ ..|.| .+=+++..++.++..|+
T Consensus 115 L~f~~~~~p~i~hRGi~~--------------~lpP~e------~~-ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKE--------------SLPPDE------WD-DERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EEECTTCCEEESCCEETT--------------TBSSCS------CC-HHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCCCcEEEEEcCCcc--------------cCCCCC------CC-HHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999887642 233332 12 23333 67888889999887664
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=80.95 E-value=0.15 Score=54.61 Aligned_cols=61 Identities=11% Similarity=0.101 Sum_probs=16.7
Q ss_pred hHhCcccceEEEEEEECC-eEEEEE------EEecCCCchhhHHHHHHHHHHHHhCCCCCCeeeeeEEEEe
Q 005999 395 ELLGRGSIGTTYKAVLDN-HLIVTV------KRFDANKTADTSAEAFEQHMEAVGGLSHPNLVPIRAYFQA 458 (665)
Q Consensus 395 ~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 458 (665)
+.|| ||.||+|.+.. ...||| |..+...........|.+|..+++.++|||+++.++|...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 4465 99999999764 357888 7665544434445568888899999999999999888643
No 453
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=80.08 E-value=2.2 Score=39.99 Aligned_cols=117 Identities=12% Similarity=0.073 Sum_probs=78.9
Q ss_pred CCCCCeeeeeEEEEeCCeEEEEEEecCCC-CHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeeccCCCCC
Q 005999 444 LSHPNLVPIRAYFQAKGERLVIYDYQPNG-SLFNLIHGSRSIRAKPLHWTSCLKIAEDVAQGLAYIHRASWLIHGNLKSS 522 (665)
Q Consensus 444 l~h~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~L~yLH~~~~iiH~Dlk~~ 522 (665)
..||+++.. .+-.+++.+.+.|+.-..+ ++.. + ..++...+++++..|+....+++. -+|--|+|+
T Consensus 42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i--------k~~~~~eKlr~l~ni~~l~~~~~~---r~tf~L~P~ 108 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I--------KSFTKNEKLRYLLNIKNLEEVNRT---RYTFVLAPD 108 (215)
T ss_dssp SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G--------GGSCHHHHHHHHHHGGGGGGGGGS---SEECCCSGG
T ss_pred ccCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H--------HhcCHHHHHHHHHHHHHHHHHhcC---ceEEEEecc
Confidence 378988876 4555566655555543322 2222 2 346778899999999988755553 368889999
Q ss_pred ceEeCCCCceEEeecccccccCCCCCCCCCCCcccCCccccCCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 005999 523 NVLLGADFEARLTDYCLSVLSDSSSVEDPDTVAYKAPEIRKSSRRATSKSDVYAFGVLLLELLTGKHPSQH 593 (665)
Q Consensus 523 Nill~~~~~~kl~Dfgl~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~k~DvwSlGvvl~elltg~~P~~~ 593 (665)
|++++.++.+++.-.|+... ++|. ..++..=.-.+=+++..+++++..|+.
T Consensus 109 NL~f~~~~~p~i~~RGik~~--------------l~P~------~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNV--------------VDPL------PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp GEEECTTSCEEESCCEETTT--------------BSCC------CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred eEEEcCCCCEEEEEccCccC--------------CCCC------CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 99999999999988776422 2222 122222334778899999999988763
No 454
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=63.61 E-value=3.3 Score=25.99 Aligned_cols=26 Identities=19% Similarity=0.442 Sum_probs=17.2
Q ss_pred cceeeehhHHHHHHHHHHHHHHHhhh
Q 005999 280 RGLILGLSIGFAVLVSFLVCIFLLIR 305 (665)
Q Consensus 280 ~~~i~gi~~g~~~~~~~~~~~~~~~~ 305 (665)
.+.++|+++|.+++.+++++.++++.
T Consensus 6 ~gaIaGIVvgdi~~t~~i~~~vy~~~ 31 (33)
T 2l34_A 6 PGVLAGIVVGDLVLTVLIALAVYFLG 31 (33)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cceEEeEeHHHHHHHHHHHHHHhhee
Confidence 35577888888777766666555543
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=61.52 E-value=22 Score=28.66 Aligned_cols=47 Identities=13% Similarity=0.085 Sum_probs=29.5
Q ss_pred CCCcccCCccccCCCCCCcEEEccCCcCccCCC-CCCCCCCCCEEEccCc
Q 005999 84 FGLRGTFPPNTLTRLDQLRVLSLHNNSLTGPIP-DLSSLINLKSLSLSRN 132 (665)
Q Consensus 84 ~~l~g~l~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~Ls~N 132 (665)
.+++ .|....|.++++|+.+.|..+ ++.+-. .|.++.+|+.+.+...
T Consensus 6 ~~vt-~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVV-GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCC-SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccC-EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 3444 566667777777777777654 444444 5777777777776554
No 456
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=56.37 E-value=5.2 Score=41.55 Aligned_cols=27 Identities=26% Similarity=0.421 Sum_probs=22.7
Q ss_pred eeccCCCCCceEe------CCCCceEEeecccc
Q 005999 514 LIHGNLKSSNVLL------GADFEARLTDYCLS 540 (665)
Q Consensus 514 iiH~Dlk~~Nill------~~~~~~kl~Dfgl~ 540 (665)
++|+|+.+.|||+ +++..++++||-.+
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya 278 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYS 278 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTC
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhc
Confidence 5799999999999 45667999999765
No 457
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=46.74 E-value=22 Score=24.91 Aligned_cols=19 Identities=21% Similarity=0.083 Sum_probs=9.1
Q ss_pred ccceeeehhHHHHHHHHHH
Q 005999 279 RRGLILGLSIGFAVLVSFL 297 (665)
Q Consensus 279 ~~~~i~gi~~g~~~~~~~~ 297 (665)
+.++|++.++++.++.+++
T Consensus 8 p~WiIi~svl~GLLLL~Li 26 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLL 26 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 4455555555444443333
No 458
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=45.02 E-value=4.2 Score=25.81 Aligned_cols=6 Identities=17% Similarity=0.595 Sum_probs=2.4
Q ss_pred eehhHH
Q 005999 284 LGLSIG 289 (665)
Q Consensus 284 ~gi~~g 289 (665)
++.++|
T Consensus 11 aagVvg 16 (35)
T 1iij_A 11 IATVVG 16 (35)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333444
No 459
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=42.65 E-value=2.5e+02 Score=30.54 Aligned_cols=46 Identities=15% Similarity=0.068 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHH--HHHHHHHhCCCeeccCCCCCceEeCCCCceEEeeccccc
Q 005999 491 WTSCLKIAEDVA--QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSV 541 (665)
Q Consensus 491 ~~~~~~i~~~i~--~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~ 541 (665)
+..+..++..+| ..+.|+=..+ |=.++|||++.+|++.=+|||...
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGig-----DRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGVG-----DRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCC-----CCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeecc-----CCCCcceeEcCCCCEeeeehHHhh
Confidence 455566666554 3456665444 778999999999999999999874
No 460
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=38.81 E-value=2.2e+02 Score=31.47 Aligned_cols=45 Identities=16% Similarity=0.150 Sum_probs=32.8
Q ss_pred HHHHHHHHHHH--HHHHHHHhCCCeeccCCCCCceEeCCCCceEEeeccccc
Q 005999 492 TSCLKIAEDVA--QGLAYIHRASWLIHGNLKSSNVLLGADFEARLTDYCLSV 541 (665)
Q Consensus 492 ~~~~~i~~~i~--~~L~yLH~~~~iiH~Dlk~~Nill~~~~~~kl~Dfgl~~ 541 (665)
..+..++..+| ..+.|+=.. +|=.++||||+.+|++.=+|||...
T Consensus 529 ~ar~nF~~SlA~~Svv~YILGl-----GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLGV-----GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-----CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHccC-----CCCCCcceEEeCCCCEEEEeehhhh
Confidence 34455555544 345566544 4889999999999999999999874
No 461
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=36.94 E-value=35 Score=22.87 Aligned_cols=27 Identities=19% Similarity=0.201 Sum_probs=11.2
Q ss_pred ehhHHHHHHHHHHHHHHHhhhhhccCC
Q 005999 285 GLSIGFAVLVSFLVCIFLLIRRSSEGR 311 (665)
Q Consensus 285 gi~~g~~~~~~~~~~~~~~~~~~~~~~ 311 (665)
+|+.|++.++++++++.+.++.--+++
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRR 38 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhh
Confidence 333333333444444444444444443
No 462
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=36.62 E-value=90 Score=24.89 Aligned_cols=45 Identities=11% Similarity=0.042 Sum_probs=27.1
Q ss_pred cCccCCC-CCCCCCCCCEEEccCcccCCcCcccccCCCCCCEEEeec
Q 005999 110 SLTGPIP-DLSSLINLKSLSLSRNFFSGAFPLSILSLHRLTILDLSY 155 (665)
Q Consensus 110 ~l~~~~p-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 155 (665)
.++.+-. .|.++++|+.+.|..+ ++..-...|.++.+|+.+.|..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3444444 5777777777777654 3323345566677777666654
No 463
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=35.36 E-value=18 Score=26.30 Aligned_cols=9 Identities=11% Similarity=0.135 Sum_probs=4.3
Q ss_pred hhHHHHHHH
Q 005999 286 LSIGFAVLV 294 (665)
Q Consensus 286 i~~g~~~~~ 294 (665)
+++|+++++
T Consensus 12 ivlGg~~~l 20 (70)
T 2klu_A 12 IVLGGVAGL 20 (70)
T ss_dssp HHHHHHHHH
T ss_pred HHHhHHHHH
Confidence 455554443
No 464
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=34.31 E-value=31 Score=22.85 Aligned_cols=18 Identities=17% Similarity=0.010 Sum_probs=8.4
Q ss_pred CccceeeehhHHHHHHHH
Q 005999 278 KRRGLILGLSIGFAVLVS 295 (665)
Q Consensus 278 ~~~~~i~gi~~g~~~~~~ 295 (665)
.+.++++..+++..++..
T Consensus 8 vp~wiIi~s~l~GLllL~ 25 (42)
T 2k1a_A 8 IPIWWVLVGVLGGLLLLT 25 (42)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHH
Confidence 344555555544444433
No 465
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=33.97 E-value=40 Score=23.71 Aligned_cols=20 Identities=20% Similarity=0.092 Sum_probs=9.7
Q ss_pred CccceeeehhHHHHHHHHHH
Q 005999 278 KRRGLILGLSIGFAVLVSFL 297 (665)
Q Consensus 278 ~~~~~i~gi~~g~~~~~~~~ 297 (665)
.+.++|++.++++.++++++
T Consensus 10 vp~wiIi~svl~GLllL~li 29 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLLLTIL 29 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHH
Confidence 34555555555554444333
No 466
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=28.64 E-value=59 Score=21.76 Aligned_cols=19 Identities=16% Similarity=0.097 Sum_probs=7.8
Q ss_pred HHHHHHHHHhhhhhccCCC
Q 005999 294 VSFLVCIFLLIRRSSEGRN 312 (665)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~ 312 (665)
+++++++.+.++.--++++
T Consensus 20 v~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 20 LFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhhhhh
Confidence 4334444444444444433
No 467
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=26.26 E-value=94 Score=22.92 Aligned_cols=12 Identities=8% Similarity=-0.382 Sum_probs=5.0
Q ss_pred HHhhhhhccCCC
Q 005999 301 FLLIRRSSEGRN 312 (665)
Q Consensus 301 ~~~~~~~~~~~~ 312 (665)
+.+|+..+-++.
T Consensus 32 ~gcwcylrlqri 43 (90)
T 1zza_A 32 LGCWCYLRLQRI 43 (90)
T ss_dssp HHHHTTTSSCSS
T ss_pred HHHHHHHHHHHH
Confidence 334444444443
No 468
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=26.00 E-value=86 Score=22.86 Aligned_cols=18 Identities=17% Similarity=0.462 Sum_probs=13.0
Q ss_pred eeeehhHHHHHHHHHHHH
Q 005999 282 LILGLSIGFAVLVSFLVC 299 (665)
Q Consensus 282 ~i~gi~~g~~~~~~~~~~ 299 (665)
+++|.++++++++.+.++
T Consensus 12 ivlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 578888888877765543
No 469
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=30.07 E-value=16 Score=24.14 Aligned_cols=13 Identities=46% Similarity=0.825 Sum_probs=6.1
Q ss_pred ceeeehhHHHHHH
Q 005999 281 GLILGLSIGFAVL 293 (665)
Q Consensus 281 ~~i~gi~~g~~~~ 293 (665)
+.++|..++++++
T Consensus 17 ga~iGL~v~gVai 29 (43)
T 2llm_A 17 GAIIGLMVGGVVI 29 (43)
Confidence 3455555444433
No 470
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=23.69 E-value=71 Score=19.85 Aligned_cols=22 Identities=27% Similarity=0.353 Sum_probs=9.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhc
Q 005999 287 SIGFAVLVSFLVCIFLLIRRSS 308 (665)
Q Consensus 287 ~~g~~~~~~~~~~~~~~~~~~~ 308 (665)
++|.+++...+...+++||-|+
T Consensus 13 i~gl~vif~~lg~tflywrgrr 34 (40)
T 2l9u_A 13 IAGLVVIFMMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCceeEEEcccc
Confidence 3444444333444455554443
No 471
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=21.03 E-value=23 Score=19.10 Aligned_cols=9 Identities=33% Similarity=1.291 Sum_probs=6.9
Q ss_pred CCcccccee
Q 005999 62 DYCQWQGVK 70 (665)
Q Consensus 62 ~~C~w~gv~ 70 (665)
..|+|.|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 469999864
Done!